CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP022375	Providencia rettgeri strain BML2576	1 crisprs	cas3,WYL,DEDDh,RT,csa3,DinG	1	1	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022375_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022375_1

1278951-1279075

Orphan

Consensus_repeat	Method
CTTAGTCACATACCGATGTATGCTCCTACATTTTCTTCATATTTTGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022375_1

>merge|NZ_AP022375|1|1278951-1279075|CRISPRCasFinder
CTTAGTCACATACCGATGTATGCTCCTACATTTTCTTCATATTTTGAGCCGCAGCGTTGTTGGCTGCGTGCTCTCACCTTAGTCACATACTGATGTATGCTCCTACATTTTCTTCATATTTTGAG

>NZ_AP022375|1|1|1278951-1279075|CRISPRCasFinder
CTTAGTCACATACCGATGTATGCTCCTACATTTTCTTCATATTTTGAG	CCGCAGCGTTGTTGGCTGCGTGCTCTCAC
CTTAGTCACATACTGATGTATGCTCCTACATTTTCTTCATATTTTGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022375.1\|WP_004260432.1\|1302284_1303472_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|184990
NZ_AP022375.1\|WP_164456284.1\|1269635_1270925_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|234607
NZ_AP022375.1\|WP_164455203.1\|1299110_1302269_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|185081
NZ_AP022375.1\|WP_004260493.1\|1262561_1263272_-\|DNA/RNA-nuclease-SfsA	unknown	unknown	gnl\|CDD\|234733
NZ_AP022375.1\|WP_164455194.1\|1263372_1265832_+\|ATP-dependent-helicase-HrpB	unknown	unknown	gnl\|CDD\|236950
NZ_AP022375.1\|WP_004260488.1\|1266014_1268537_+\|bifunctional-glycosyl-transferase/transpeptidase	unknown	unknown	gnl\|CDD\|236544
NZ_AP022375.1\|WP_094960957.1\|1276524_1278756_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_AP022375.1\|WP_164455196.1\|1275176_1276508_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_AP022375.1\|WP_004260455.1\|1281004_1282642_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_AP022375.1\|WP_036958289.1\|1279541_1280336_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_AP022375.1\|WP_144140758.1\|1271625_1272456_-\|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF	unknown	unknown	gnl\|CDD\|179575
NZ_AP022375.1\|WP_094960955.1\|1273474_1275001_+\|dGTPase	unknown	unknown	gnl\|CDD\|235320
NZ_AP022375.1\|WP_004260480.1\|1271138_1271483_+\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
NZ_AP022375.1\|WP_164455201.1\|1293155_1299050_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372383
NZ_AP022375.1\|WP_136133984.1\|1291963_1292899_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|368641
NZ_AP022375.1\|WP_004260453.1\|1282707_1284009_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_AP022375.1\|WP_164455205.1\|1303606_1304221_+\|multidrug-efflux-transporter-transcriptional-repressor-AcrR	unknown	unknown	gnl\|CDD\|182632
NZ_AP022375.1\|WP_144140756.1\|1272524_1273217_-\|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|180148
NZ_AP022375.1\|WP_164455199.1\|1284217_1290106_+\|prevent-host-death-family-protein	unknown	unknown	gnl\|CDD\|372383
NZ_AP022375.1\|WP_144140443.1\|1290504_1291890_+\|DASS-family-sodium-coupled-anion-symporter	unknown	unknown	gnl\|CDD\|273267

Protein	Function_ID	Function_description	E-value
NZ_AP022375.1\|WP_004260432.1\|1302284_1303472_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|184990	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA.	7.72423e-174
NZ_AP022375.1\|WP_164456284.1\|1269635_1270925_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NZ_AP022375.1\|WP_164455203.1\|1299110_1302269_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|185081	PRK15127, PRK15127, multidrug efflux RND transporter permease subunit AcrB.	0
NZ_AP022375.1\|WP_004260493.1\|1262561_1263272_-\|DNA/RNA-nuclease-SfsA	gnl\|CDD\|234733	PRK00347, PRK00347, DNA/RNA nuclease SfsA.	9.28482e-138
NZ_AP022375.1\|WP_164455194.1\|1263372_1265832_+\|ATP-dependent-helicase-HrpB	gnl\|CDD\|236950	PRK11664, PRK11664, ATP-dependent RNA helicase HrpB; Provisional.	0
NZ_AP022375.1\|WP_004260488.1\|1266014_1268537_+\|bifunctional-glycosyl-transferase/transpeptidase	gnl\|CDD\|236544	PRK09506, mrcB, bifunctional glycosyl transferase/transpeptidase; Reviewed.	0
NZ_AP022375.1\|WP_094960957.1\|1276524_1278756_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_AP022375.1\|WP_164455196.1\|1275176_1276508_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_AP022375.1\|WP_004260455.1\|1281004_1282642_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_AP022375.1\|WP_036958289.1\|1279541_1280336_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	4.87087e-154
NZ_AP022375.1\|WP_144140758.1\|1271625_1272456_-\|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF	gnl\|CDD\|179575	PRK03379, PRK03379, vitamin B12-transporter protein BtuF; Provisional.	6.1055e-138
NZ_AP022375.1\|WP_094960955.1\|1273474_1275001_+\|dGTPase	gnl\|CDD\|235320	PRK04926, dgt, deoxyguanosinetriphosphate triphosphohydrolase; Provisional.	0
NZ_AP022375.1\|WP_004260480.1\|1271138_1271483_+\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	6.08929e-80
NZ_AP022375.1\|WP_164455201.1\|1293155_1299050_+\|hypothetical-protein	gnl\|CDD\|372383	pfam12920, TcdA_TcdB_pore, TcdA/TcdB pore forming domain. This family represents the most conserved region within the C. difficile Toxin A and Toxin B pore forming region.	5.17269e-154
NZ_AP022375.1\|WP_136133984.1\|1291963_1292899_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|368641	pfam05860, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	2.02879e-15
NZ_AP022375.1\|WP_004260453.1\|1282707_1284009_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_AP022375.1\|WP_164455205.1\|1303606_1304221_+\|multidrug-efflux-transporter-transcriptional-repressor-AcrR	gnl\|CDD\|182632	PRK10668, PRK10668, DNA-binding transcriptional repressor AcrR; Provisional.	1.15986e-100
NZ_AP022375.1\|WP_144140756.1\|1272524_1273217_-\|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase	gnl\|CDD\|180148	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase.	1.09327e-136
NZ_AP022375.1\|WP_164455199.1\|1284217_1290106_+\|prevent-host-death-family-protein	gnl\|CDD\|372383	pfam12920, TcdA_TcdB_pore, TcdA/TcdB pore forming domain. This family represents the most conserved region within the C. difficile Toxin A and Toxin B pore forming region.	2.19338e-171
NZ_AP022375.1\|WP_144140443.1\|1290504_1291890_+\|DASS-family-sodium-coupled-anion-symporter	gnl\|CDD\|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	6.82739e-92

>NZ_AP022375.1|WP_094960957.1|1276524_1278756_+|GTP-diphosphokinase
MVAVRSAHLTPAGEFAPEKWVNGLGLSNKQSEEKLIHTWQYCHDKLAGQEIAPLLLWRGIEMTEILSTLSMDIGSLQAALLFPLVEEGKLEEQEVIEEFGKSIHELVKGVLEMDAIRQLKATQSSETSSTQVDNIRRMLLSMVEDFRCVVIKLAERIAHLREVKDATEDERVLAAKECSNIYAPLANRLGIGQLKWELEDFCFRYLHPDEYKKIAKLLHERRIDREEYIDTFVTTLRKYMLKENIQADIYGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIVVERLQDCYAALGIVHTHFRHLPDEFDDYVANPKPNGYQSIHTVVLGPNGKTLEIQIRTRQMHEDAELGVAAHWKYKEGATGIGKGSSYENRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFSYQLQMGDQIEIITQKHPNPSRDWLNPNLGYVTTSRGRAKIQNWFRKQDRDKNILAGRQILDSELSQLDISLREAEKLLIARYNVHSLDEVLAGIGGGDIRINQLVNFLQSKFNKATAEEEDRAAMKTLESKSSLPRAPSHGSGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITKGRGISIHSADCEQLAELQSHAPERVIDAVWGENYSSGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQLATIDMTIELYNIEVLSRVLAKLNQLPDVIEAKRHSQ
>NZ_AP022375.1|WP_164455196.1|1275176_1276508_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSPNRRTTSRRQITVVADSLDAAGQGVARIEGKTIFVTGLLPGEEAQIELTEEKRHFAKGKVTKRLSTSPQRAKSRCRYFNQCGGCQQQHVDIALQRESKAHALAYLMQRETSLDISVPTVISGEPYGYRRRARLGLQYQPKSKNVVMGFRQSQSNTLVDIKNCPILSPDLDILLKPLSECINQLSNKAKLGHVELIRADNCKIVLIRYLTPFLLSDTQKLSDFENQHGVSIWLAGNDENLQALSPNSPQPEYQVAGELLKFNPLNFIQVNGQVNQQMVEQALAWLDLNSEDRVLDLFCGMGNFTLPIARLVKSVVGVEGVENLVEQARNNAQLNTICNATFYNENLEAQIHTQPWAVHGFNKVLLDPARAGAAGVMEHLIKLMPEKIVYVSCNPTTLARDSKALLDGGYQLLQLRMLDMFPQTSHLESMALFIRRPEV
>NZ_AP022375.1|WP_094960955.1|1273474_1275001_+|dGTPase
MGEINFVKKLNFQRNYMSSAKNQKISPKDEDAVNRLFESDRGRIINSAAIRRLQQKTQVFPLEQNAAVRSRLTHSLEVQQVGRYISKTVLGELKKKKLLEPYGLDERCDAFESLVEMACLMHDIGNPPFGHFGEAAIQRWFTKLLSPSYLYTPNSPDPCQIPALQLTGNEKQDLFRRQLKQDLCSFEGNAQGLRMAHRLLKLNLTYAQIGSILKYTRGAYDLEPIPPEFDYLMKKPGYYWSEVDFVSELTKKLDMEKYCRFPLSYIMEAADDISYCIADLDDAAEKGIFTVEQLIEYLKAEWGDIEQNDLFDQTVMRAFNNISDNHTRRIQQDQFFMYLRVNITGKLSHYSALQFIKNLPEIYNGTFNSALLEDKSPEHRLLKVLKTVAFKHVFNHHEVEELELQGYRIISGLLDFYSPLLMMNRRDFAELVEKNYHKHFFIETRLFHKLSNKHRLSYTEALEKISATNEADKSILEFYYRARLIQDYISGMTDHYAYEEYRKFMVSN
>NZ_AP022375.1|WP_144140756.1|1272524_1273217_-|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase
MKVGIIGAMEQEVAILRSQIENCQTINRAGCEIYTGQINGVDVTLLKSGIGKVAAAIGTTLLLEHCQPDVVINTGSAGGLDPRLNVGDIVVSTEVRYHDADVTAFGYEPGQMAQCPPAFVADTKLIEVAEQCIKLLDMNAVRGLVCSGDAFINGAEPLARIKAMFPQVAAVEMEATAIGQVCHQFGIPFVVVRAISDVADKESHTSFDEFLPVAARQSSLMITAILAKLA
>NZ_AP022375.1|WP_144140758.1|1271625_1272456_-|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF
MKRITHYFSLTITLLCALLVAFSALGAAKQRVISLSPANTELAYAAGLGDSLIAVSAYSDYPEQAKKLEQVSDWQGLNVERIIALKPDLILAWRGGNPQRPLEQLAGLGIPIIYFDPQTIDDVINSVIELAQYSPTPEIAQQNVEKMRSRVAPYQKEKISNKKSKKVFIQLGTQPLFSAGNHTLQNDVVEFCGSENIFANSAVQWPQVSREQVLTRKPDVIIMTGSAEQEKAVKEFWHSQLNVPIIRLNEDWFHRAGPRIVNATEQLCEQLNALSD
>NZ_AP022375.1|WP_004260480.1|1271138_1271483_+|iron-sulfur-cluster-insertion-protein-ErpA
MSDDAALPLQFTDAAAIKVKDLVSDEDNPNLRLRVYITGGGCSGFQYGFTFDDQINEGDMTIEKQGVALVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSV
>NZ_AP022375.1|WP_164456284.1|1269635_1270925_-|glutamate-1-semialdehyde-2,1-aminomutase
MSQSEKLYAQAKEQIPGGVNSPVRAFNGVGGTPLFIEKADGAYIYDVDGKAYVDYVGSWGPMVLGHNHPEIRDAVIKAVHKGLSFGAPTAAEVEMAELVCELVPSMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTMGEPNSPGVPEDFVKHTLTCTYNDLSSVRQAFENYPEDIACVIVEPVAGNMNCVPPTAEFLPGLRALCDEFNAVLIIDEVMTGFRVALGGAQDYYDVQPDLTCLGKIIGGGMPVGAFGGRLEIMEKLAPIGPVYQAGTLSGNPVAMAAGLACLKEVSQPGVHSRLNELTEKLARGLKRVSTEQGIPMVINHVGGMFGIFFTDAPTVTCYQDVMKCDVERFKKFFHYMLEQGIYLAPSAFEAGFMSIAHSDEDIEKTIKAAETALMKIKEN
>NZ_AP022375.1|WP_004260488.1|1266014_1268537_+|bifunctional-glycosyl-transferase/transpeptidase
MSGKDFEPIGRRNKKTAGKKQSSSRRRRDRDDYDDEDLFEDDDIDEQYLDDEDEEEQMAKKGSKKNKPRKVKSKWRWFWLLVKLMIVFAVLLAAYGFYLNQQIKERLDGKVWDLPAAVYGRMVNLEPGMDYSQAEMVRLLEGMQYRKVSKITTSGEFVVRGNSIEILRRPFNFPDQKEGQILARMVFDNNALSKIENMENGRSFGFFRLDPKLITMMQSANNEQRLVLPISDFPESLVKILLETEDRNFYEHDGVSLYSIGRAVVANLSAGRSVQGGSTLTQQLVKNLFLTNERTLKRKANEAYMAVLLDYNYSKERILELYLNEVFLGQNGNDEIRGFPLASLYYFGRPINELSFDQQALLVGMVQGASTYNPWTKPQNAIKRRNIVLKILETRGVIDQEMYQVLSARPLGVKNKEGLVASQPAFMQMVRSELNEKLGDKVKELSGAKIFTTLDPVAQTAAENAVENGVADLRKSRKLDDIEGAMVVVDRINGEVRAMVGGSQPQYSGFNRALNARRSIGSLAKPPVYLAALSEPDRFRLNTWLKDEPLTVKVGNQNWSPRNYSRNFNGRMMLVDALAKSQNIPTVNLGLEVGLDQVFNTFVRLGAPAAAMEKVPAMLLGAVNLTPAEVAQVYQTIGGDGNRAKLSALRSVIDGDGNEIYQSYPSAERAVPSQAAYLTLYGMQQVVKQGTGRVLLTKYAKYNLAGKTGTTNDLRDSWYAGIDGKEVAIVWVGRDNNGPTQLTGATGALKVYQRYLDNQAPLALINRAPEGIVDMQVTADGQLSCSNFGGGRMLPIWTDNPEGLCQASEEQAPVWDLNGNNGEQQDDAPDWVKDMFGNNP
>NZ_AP022375.1|WP_164455194.1|1263372_1265832_+|ATP-dependent-helicase-HrpB
MLPIFEVCEDILTALVASPQVLLHAPTGAGKSTVLPLEILKSGVIDGRVIMLEPRRLAARSVAARLAQQLGEDIGHTIGLRMRSETRVSRHTRLEVVTEGVLTRLLQNDPMLEGVGLVILDEFHERNLQADLGLALLIDSQQALREDLRILLMSATLDNQGLNQLFPDAPVITSQGRTFPVIREYHPINPNKPFHKEVALAAWQLLQQEHGSLLLFLPGMGEIEKVRVELASMVSEDILLCPLYGALSLQAQQQAIQLAPERMRKVVLATNIAETSLTIEGIRLVMDSGFERVGQFNPQTGLTKLIKQRISQASMAQRAGRAGRLEAGVCWHLFSEEQAERAAQFSEAEIAQSDLSNLWLSLLQWGCHDVAQLNWLTLPPKPAISAAKNLLSQLGAIDVAGKLTPFGQQMAVLGSSVRTAAMLCKAQQTQNQHVIQLAALLVAIIEEPPRQQDADLRYYIERPTEGWCKRASALCEQKVLSTIGQQDALISEWLPTLLAVGYPDRIAKSRDNQHRYQLASGLGAILGESDRLMGESWLMVVSLWQPENMADARISLAYPIEIDRLQADCPSLFNTQETVEWDEQKGTLLAWKRLQCGQLVVKSERLSNPDKAEIRQALVYWLKQNGLQQLNWQEDALQLCIRCMLAKRHFPDIAFPDFDDIALLDSLDEWLEPYLDGITNKQKLQQIDLASLLINRLDWQQQQWLESMFPKTYRAPSLHDVSIHYSLDKPPVIAIRMQEMYGEKANPTVAQGKIPITLSLLSPAMRPLQITQDLGAFWQGSYKEIQKEMKGRYPKHLWPDDPANTAPTRQTKKAMMGAK
>NZ_AP022375.1|WP_004260493.1|1262561_1263272_-|DNA/RNA-nuclease-SfsA
MEFEPALQPATLIKRYKRFLADVTLPSGEEITIHCANTGAMTGCATPGDTIWYSTSNNTKRKYPYSWELTQTTNGHFICINTLRANQLVAQALAEKHIPELSEYSVIKPEVKYGTENSRIDFYLTQNGLPDCFIEVKSVTLLENNQGFFPDAVTLRGQKHLRELMHIAKEGKRAILLFVALHTGIHVASAAAHIDKQYALLLEEARQSGVEVLCYQADITVQQMVLSKQIHFNSIK
>NZ_AP022375.1|WP_036958289.1|1279541_1280336_+|nucleoside-triphosphate-pyrophosphohydrolase
MSQEKPEIERLLSIMAQLRDPQTGCPWDKVQTFKTIAPYTLEETYEVLDAIEREDFNDLKGELGDLLFQVVFYAQMANEKSLFDFNDICQAVSDKLEHRHPHIFDTNNTLSSSEVIEGWEKRKAKERAEKSQFSVLDDIPNSLPALMKAYKIQKRCASVGFDWDTLGPVVGKVHEELEEVMEEATQVVVDQTHLEEEIGDLLFAVVNLSRHLGHKPEIALQKACNKFEGRFRQIEKSLAESGKTTESATLDEMEGLWQQVKSQE
>NZ_AP022375.1|WP_004260455.1|1281004_1282642_+|CTP-synthase-(glutamine-hydrolyzing)
MKTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIRTKMTRRNNFTTGRVYSEVLRKERRGDYLGATIQVIPHITNEIKDRIIRGGEGHDVVLVEVGGTVGDIESLPFLEAIRQMAAEVGRERTLYLHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRVIPANERAKIALFCNVPEKAVISLKDVDSIYKIPALLKSQGLDEYICNRFRIDAPEANLAEWEQVIYEEANPAGEVTIGMVGKYVELPDAYKSVIEALKHGGLKNRLTVNIKLIDSQDIETRGVELLKGLDAILVPGGFGERGVEGKILTAQYARENKIPYLGICLGMQVALIEFARNVANMADANSTEFKADCKFPVVALITEWRDEEGNLEVRSEESDLGGTMRVGGQPCHLVNGSLVREMYGSETIIERHRHRYEVNNLLLKRIEDAGLKIAGRSVDNKLVEIIENPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAAGKYQKGELK
>NZ_AP022375.1|WP_004260453.1|1282707_1284009_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKARFLGKGVLKAVAAVNGPIAEALIGKDAKDQANIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHISDLNGTHGQYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAPTLKEAVRMGSEIFHHLAKVLKSKGMNTAVGDEGGYAPNLESNAAALAAIKEAVEQAGYVLGKDVTLAMDCAASEFYNAETGNYELKGEGKTFTSQEFTHYLEELTKQYPIVSIEDGLNESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIDKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGKNAPFNGLKEVKGQA
>NZ_AP022375.1|WP_164455199.1|1284217_1290106_+|prevent-host-death-family-protein
MTIKKYTEVIEKINEIINKYTLDASELIKIGSTAEKGDITLTKYDNSRYDISYYDSEQPDPFVIKSYLLNNNNYDATHLYPSYVDIPKKPSDTFLLFTGTLNKNSIIVTNHDKDHYRVYNDCRMNSSILYDDVVMSADYQDYKIKDGTNGNATAYMQFVNNDWQLVLQKQEVKYYKGERKSFAIEGKNRILKYIPNNKMDSINKNKFENTRENIHVKILSIAKKFNCLYMDEKGNNIFETERKLDSAKAWLEFITSISIKINNHVKMLKSFQEVWQKQLQELNGKINKTIDDKVKIKSLTRKLAQSDIQISLYHNHYNRILFEGNQIERSKLWWEIKKSKGMNAVVKNEEQSIYGGINEYKQTINERYENLVFVHKNSNKPSFRNSFSEGMDGFSEVNISGLKKNMTSIELKKLYLTQDLSPIERGALYQRINNVGHAEYIKYILNETGKVSELFYSLNSQINRLMPQDFYLTLIGDDSRGRCYPLVRAMSVALAKDDQKGADTLFNKLYIASANPKDNDSILIKTALERLHSNVEAIEASFSHGRINIKETQNLLEAKQKTMMFAINSQNHSMLIGKTINDKKSHYYFYDPNFGLFSFNNSKELFSAFKKFMVDNKMADFYSAFGSNKDPVFEVISIITDDMSSVPVGNGLSVTHLSEPISLSLITKRESKTSSIVNKQLAIQRDIQLKGTLAMLEAQQWGYRLETSLTNLSMKYQFNRKWVPIFSTLKENEKGKYQLQFIDYDDPEKSHWIEMDDPTIKEFNHYYEKQVALFGESYFFDGEKLIPQKNIDNNSEYNINEPSFDGLNAGIAIQSLMLWYSDKNHNRNGMNNDNFNLALALKIHSYINYGMIFHGALNDLAKIVGIIRSGLNENISYEAKNISLFSTSLAQTVNEGVTVLFNGTLVGFDIYELTYAKDEPHKIIFSTQLAFDSASFVTGGLSLGTGALGVTEASVFMGGAGVIFAGLSIGFTGLARNYAVIGEDAKSVGRYFYQLDQAYKNNGYDYLPDKSIVLPRAGAVFKTIDLRNNQIEFDSQYIYRTSAHSAGGGRKNYIFWAGNFPTMVHDRQQAINIRKGIGYNMSSRQYGYLDAQIIALPITPKSYIKYDYNLWPGATTRHDSGFDVIRRLENTDKFDYDFYIFPSENTITQIFHEYVDTEIEIKLNNQYRHLVIPKIPSEWHGKIKYSIKGDGGVYKISPQIGAEIELIDDSNKLSTSHWIISGGLLGKNDIIVSSDRIDVGGVKIKIDQSVSKKDFLYINNNNEVYKVDFLNLDVNLIGEDGNKWVGHNEELSNHLNKLNEQHKIMGQYVLIENYQFGNVNVGRAFYQVSTGRYIFTDSSEQYTKNADLFSPLGTGACFYSKDNNILWLVDQDNKVQYTYIINNNAQRNFELTKLWVSNENIYFSCRYPSEGVHEVANYMINGNEIILVSVSIDELTHYQLFEEKSVIPKDISDMIFGKYLLLIDKVKDKKTIYSKSVKLADVIQISGIDKNNNIYHYWLRERDGVIIRPNVTSYNLALDNKELFETKDLMFVGFLLNNDGKEVFFFYSHKEKSIYRQVGENPNFFQIEKQEIKRIETENIESVIFSQSKILIISNNGIVSQINAQGNIQPVALNQKWFDSHSTRWWEDFGQLESNQGVYALLGLKMSDNQAIIPAWYENKSIVIAYQLSSKNTLQYLGIDEYRSAAIIFDMENKKLYWQPIVNEAALVKAFDKNNLKNTLSLPSMYEIYPNIKFDTVKKLKNGLLMYTTNDEILYYSKGENNSDSNKEEFSSSLLINGGNSRDIINPPVINNVKNIILSAGDKEDSYVISRAAWLHYQAIIIDNNASDRLTDTLVLPVDDMNSLAVNRLGDDLILTDINTNSILIIRRIFATNAQGYEHLKLRFLNSNGDIRVKTIVDSYLLTDGLMVTNTPNESDEEILLSHDNQLAQLASMTSSLNHRESMSRHQDIIQPSLVTAPVLVG
>NZ_AP022375.1|WP_144140443.1|1290504_1291890_+|DASS-family-sodium-coupled-anion-symporter
MDASESLTPSVSPTPSNKRGWIILAVDIVLLILLLKYLPFDDKANAGLAMMVFIGVLWLTEAIHVTITALCIPILAVGLGLMNTGDALKSFANPIIFLFFGGFALATALHIQGLDRLIANRLLMAARGRLSVAVLLLFGVTALLSMWISNTATAAMMLPLVLGILSNLDVRHERNTFVFVLLGVAYSASIGGLGTIVGSPPNAIAAAALGLDFLSWMKYGIPIMVVLLPMMFVLMYMMLRPNLKHRFQIELEHVEWNGKRITAMTIFLLAVICWITSTFISDALGGVKDLDTIIAMSAAILIGVTGVASWSQIQKNTEWGVLMLFGGGLTLSAILSSSGASKIMADWMQMTFGESHWFVIILAVTTFIIILTEFTSNTASAALLVPIFATVAEALGMPVIVLTMIIGIGASCAFMLPVATPPNAIVFGSGYIRQIEMVRVGAVLNVACILVISLFAWFIWM
>NZ_AP022375.1|WP_136133984.1|1291963_1292899_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MKKTISFTLLSCTLFHTTSLAEAPDITKAKVINIEAPLKNNISFNTFESLSSNDDGLIFNNDINSNTKLNNKAAKLIFAEVTGTETSNLQGILGIKGQRANLVIANPNGISWKDGAVDNINSLSLIAGKFEKKYIKNKEKDNQLELQKLEDYNQLKFSTQPASQISISQQQGTPIQLSKLNIVADQIKLQNTLNIHSAIQNYISASGNSTLSPSEGIVKYSTKFKTDIPYIQGNHLEMDEQTKLTGRNIVLESHQYHCKDNFLCPQNKIDIQGVINTMSFSVRGDADIIFSDTGVIKIGKNQQALIAKTTQ
>NZ_AP022375.1|WP_164455201.1|1293155_1299050_+|hypothetical-protein
MSGDSYSSLLNHAIYVMDKINLDKNIMMLVEAIKYEYRHEGKWSPDLLKKHDKLKKEIERKSYFLYNNDVPIGIEKLSNQEELEFIGYIRDLSTGNHDVDIRVQGKEDIELSNLVDSDLLSSQALRILPKNLKKRMKLRSSINARLTINIHKKYINRLAKSLVKLFHEPSPQCIEQAKIMGPRKFGIQTDQAVIYLSESGLEHAKEITQRLNTLIPSDAFIEHTPVGMQKMDTGISYSETPKGQSTSHGQARSQVIADAITEALLTDRPVKQILPKVLKKVGYDTNNPSLVAQVQRDGHLKNSLFDCMMLKKHRISQDIQRFVTDPLLFPCMYVIDKFNNDILSVKAEIFNFENEFTAIECGVLAQYITSRENSGFIYDVLDFTYKFNSIFRDSGYIEKRLAPQDFYLYLMDDNSGGRCYSLVRAMAVALALEGSEGANKLLNKMFLAGASPTEPNSTLLQAALKELHVNIEAAHASTIIGQFELNEIKEILINAEQGNIYALNSTTHSMLLGKVKSGNEINYYFYDPNFGIYAFNDSGKLFSTLNKFLFKNKMAEQYAVLNSSFELVSINTEKMSEVQIGSGLTVSDLVYSDNLMESISLHKKMESILEHQSLIAKDKKIQTSLIILESEKWGERLEYSINEVCKSHQLDEKWLPVFENVENLEDGRYRIQFIHQGIEEKIYWAETKDTTFIEFKEYFHKQMAMLKSHYSFSDGELQCERDIEGTEHVDGLNIAMGIQAIIQWSENRNRQSVVSSRPTSNLATALRIHSYISYSMIAHGAINDAVKTGKIAYSLWCEGNGVAKSVMNRFSSSLVRTANEGLGVIFQGAMVGFDIYELANAQNETQRAVFGTQLAFDSSSLGLGIVSTGASLLGAETVAGVVGPLAVPLMGIGIGITELVNINERHAQKAVAVGEEFAIYQRDYQNAAISYDAKKGFLIPTPNIVIEKLDFKNGYFDLGSQYIYRGVKKKWYIEHCWLNDFQSGPSAEIDKSHAINIREAVGVTEPRVNFNGSQTGVVILPVVPKSFIRYRYSSLFGGTSRGDNGFSILRGMEERYQFYFDFFYCGLEYVITTLEHEYENTTIHVNLDSQNRQLAVPKMPIPWQGHITHTVTGNGGEYQITVNYGASLTLIEGAMYGKQSSWIIDTSLIESDGKEHVIQIMDDHIKISGITIHVDTSVADNSILLVNAQHEVCEIDFTNKTAKIINVDGSQWVNKSQTIKQHLHDLSIKNKLNGQYVAIDNYQYNGLNVGRAFYDVQYDRVIFTHSKNKENHSAQLIKINRDTAYFYSSVESVIWQADINTGSLLTQLKANMVLGLDAKIIKVTLVDDQLYITLTERSTGSTVENTYRLIQNDKLELVSVVNNRLLLDNLHDTQTLLSFEQRKQFSSHDYLACRDMSPEYQKTITIKPSIANTVMISGTDENGFWHHYWLLNESGTLVRANSERKNVNEQLFLNEFISISEEDLKYIDCELAKNAPLEKIWIVRFPLSINDGKEAIFQLKRYGIKPTLAKIFATSFGRYNPRYDLWYWFPPKDLELLGSLLNENGKEVFFFYSRKEDSIFYQKGLGQDNINPNKPSAAFRLNLSGIENVTHWQGELLVIQKEGFVRQLGANGSTQLVALNKDWFAREPLKWERFAQFSNEKDPIALFGLKDTNGERILPAWYFNEMVVVAPSFSLESELQIIDFDHDKQYGVIFDSKSKKLYRINAIGEMKFNNIFDSQGVLRFPNKLPKHVDLYPELTFKSVQKIAGGLMLLTEENAIIYHPTSSHEQLGLSLIIKGTPEDDVVIPAALGDVSVLILNGGEGSDTYQFKKVDWQRYQTIIIDNYSVDRIVDLLILPIKNQLKEIFINRQGDDLVITDSINNTSLYIRGIYGLQAHSYRHLQLRIDGTDQHIDVSLLAEQALASHGLMSLSMHFRSYFNINDKIALLGELLNRIDFTQEDFEIQTASKEQDKPHFAMLSTTSQY
>NZ_AP022375.1|WP_164455203.1|1299110_1302269_-|efflux-RND-transporter-permease-subunit
MPKFFIERPIFAWVIAIITMLAGLLAIIQLPVSQYPTIAPPAVSISANYPGADAETVQNTVTQVIEQNMNGIDNLVYMSSSSDSSGSASITLTFEAGTDGDIAQVQVQNKLQLAMPLLPQEVQQQGISVDKSTSSFLMVAGFVSSDGSMGQYDIADYVGSNIKDPLSRVNGVGETQLFGTQYAMRIWLKPEQLVKYNMTTTDVINAIKVQNNQVAAGQLGGSPSVANQRLNVSIIAQTRLNSPEEFSNILLRVNQDGSQVRIKDVADVQLGAENYSTIARFNGKPAAGISIKLATGANALDTSNNVRAALEEMKPFFPQGLEIVYPYDTTPFVKISINEVVKTLVEAIMLVVVVMYLFLQNIRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVMQEEGLSPKEATKKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSSMILSVLVAMILTPALCATMLKPIEKGSHGSQKGFFGWFNRTFEKQAHHYTDSVSRMLNGTGRYLVIYLLLVVGMAFMFVRLPSSFLPAEDQGVFLSMIQLPPGSTQEQTQAVLDEVNNYYHTEEAKNVESVFTVGGFSFAGQGQNMGLAFVVLKNWSERKGDENHVDAIVQRANIALSQKQEALIYAFNLPAIVELGTADGFDFELVDKGNLGHDKLMQARNQLLGLAAQHPEMLQGVRPNGQDDTSQYRIYIDQQKAQAQGVAISDINATLSSMFGGSYVNDFIDRGRVKKVYVQGDAESRMLPSDISNLYVRNNQGKMVPFSAFMDESKDPWKYGSPRLERYNGVPAMNIQGQAAPGKSTGDAMLLMEKLTTENLPEGIGYEWTGMSYQERLAGNQAPALYAISLIVVFLCLAALYESWSVPFSVMLVVPLGIIGALLFTSVRGLDNDVYFKVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLVEATLNAVKMRLRPILMTSLAFMLGVIPLVFSNGAGSASQNSVGTGVLGGMFAATSLAIFFVPVFFVVIRRRFSKKSEDVEHSHPPTAQ
>NZ_AP022375.1|WP_004260432.1|1302284_1303472_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MRKNRGVLPLALLVLSGGLALSGCNDEQQGGGERPAPEVGIVTLKAEPLTLKTELPGRTSAFRVAEVRPQVSGIILKRNYKEGSDVEAGTSLYQIDPAPFQATYDSAKAELAKAQANANLAALTVKRYKPLLGTNYISRQEYDEATSTYAQALAAVKAAEAAVETARINLNYTKVTAPISGRTGKSNVTEGALVSTGQATELMRVQQLDPIYVDVTQSSDDFLRLKNEIAKGAVQRESGKAPVSLINNNGQEYAQKGVLEFSDVTVDETTGSITMRAMFPNPNKELLPGMFVRAVLEDGVIEKAILVPQQGLTRTAQGTSQVMVVGAENKVEVRKVKAGQAVGNKWLVTEGLQAGDRVIVIGLQKIKPGIVVNPKEANLETQSIDNQAKPEEKSK
>NZ_AP022375.1|WP_164455205.1|1303606_1304221_+|multidrug-efflux-transporter-transcriptional-repressor-AcrR
MARKTKQQAEETRQEILDAAIKTFSERGVSATSLADIAKAAGVTRGAIYWHFKNKVDLFYQACEFGDNQIVQAEEYYRSKYTNDPLSILRELLVYILTDFIESPKNRALMEIFFLKCELVGEMAELVDFKRANYVASQCRIVDNLTACIDAGQLPADLDVECAAIMIRSLMSGLLENWLLQSENFNTNQHTITLVDYTIRNTKM

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP022375_1	1.1\|1278999\|29\|NZ_AP022375\|CRISPRCasFinder	1278999-1279027	29	NZ_AP022375.1	1279300-1279328	0	1.0

1. spacer 1.1|1278999|29|NZ_AP022375|CRISPRCasFinder matches to position: 1279300-1279328, mismatch: 0, identity: 1.0

ccgcagcgttgttggctgcgtgctctcac	CRISPR spacer
ccgcagcgttgttggctgcgtgctctcac	Protospacer
*****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP022375_1	1.1\|1278999\|29\|NZ_AP022375\|CRISPRCasFinder	1278999-1279027	29	NC_013930	Thioalkalivibrio sp. K90mix plasmid pTK9001, complete sequence	139169-139197	5	0.828

1. spacer 1.1|1278999|29|NZ_AP022375|CRISPRCasFinder matches to NC_013930 (Thioalkalivibrio sp. K90mix plasmid pTK9001, complete sequence) position: , mismatch: 5, identity: 0.828

ccgcagcgttgttggctgcgtgctctcac	CRISPR spacer
ccgctgcgttgttggctgcgggctgggac	Protospacer
**** *************** ***   **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1658571 : 1736470

Cronobacter_phage(51.11%)

terminase,integrase,holin,head,tRNA,tail,capsid,portal

attL 1677771:1677816|attR 1707209:1707254

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_112307238.1\|1658571_1659336_+\|tail	phage tail protein	E5AGC6	Erwinia_phage	2.0e-14	26.4
WP_144140886.1\|1659392_1661015_-	hypothetical protein	B9UDL6	Salmonella_phage	2.7e-53	31.4
WP_112307250.1\|1661942_1662308_-	GtrA family protein	B9UDL8	Salmonella_phage	6.5e-32	58.0
WP_164455340.1\|1663137_1664700_-	hypothetical protein	NA	NA	NA	NA
WP_164455342.1\|1664766_1665738_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_164455345.1\|1665906_1666338_-	antitermination protein Q	B6SCZ7	Bacteriophage	4.1e-25	45.1
WP_164455346.1\|1666550_1667570_-	hypothetical protein	NA	NA	NA	NA
WP_164455349.1\|1667714_1668188_-	hypothetical protein	NA	NA	NA	NA
WP_164455350.1\|1668222_1669428_-	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	9.3e-35	28.2
WP_164455352.1\|1669424_1670072_-	hypothetical protein	NA	NA	NA	NA
WP_164455354.1\|1670122_1670311_+	hypothetical protein	A0A1W6JPK3	Morganella_phage	2.1e-10	66.7
WP_164455356.1\|1670323_1670464_+	ash family protein	NA	NA	NA	NA
WP_164455358.1\|1670460_1670634_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_164455360.1\|1670626_1670818_+	hypothetical protein	NA	NA	NA	NA
WP_164455361.1\|1670978_1671182_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_164455363.1\|1671186_1671384_+	hypothetical protein	NA	NA	NA	NA
WP_164455364.1\|1671387_1674258_+	DUF927 domain-containing protein	NA	NA	NA	NA
WP_164455365.1\|1674377_1675217_-	hypothetical protein	NA	NA	NA	NA
WP_164455367.1\|1675283_1676021_-	hypothetical protein	NA	NA	NA	NA
WP_164455369.1\|1676022_1677288_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	5.8e-96	44.7
1677771:1677816	attL	NA	NA	NA	NA
WP_164455370.1\|1677982_1678999_-\|integrase	tyrosine-type recombinase/integrase	F1BUN9	Cronobacter_phage	1.4e-169	83.4
WP_164455372.1\|1679004_1679589_-	phage repressor protein	A0A218M4J1	Erwinia_phage	1.8e-28	37.9
WP_036952399.1\|1679711_1679912_+	MerR family transcriptional regulator	F1BUN7	Cronobacter_phage	2.0e-06	42.9
WP_048608898.1\|1679973_1680483_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.8e-40	50.9
WP_164455374.1\|1680485_1680773_+	hypothetical protein	NA	NA	NA	NA
WP_164455376.1\|1680783_1680939_+	hypothetical protein	NA	NA	NA	NA
WP_164456294.1\|1680942_1681299_+	DUF5347 family protein	NA	NA	NA	NA
WP_164456296.1\|1681409_1681622_+	DUF2732 family protein	NA	NA	NA	NA
WP_164456298.1\|1681611_1683744_+	replication endonuclease	F1BUM9	Cronobacter_phage	1.8e-182	54.1
WP_164455377.1\|1683745_1684444_+	hypothetical protein	Q94MZ6	Haemophilus_virus	8.4e-12	36.2
WP_164455379.1\|1684457_1684829_+	hypothetical protein	H9C172	Pectobacterium_phage	2.7e-33	61.3
WP_096864691.1\|1684949_1685171_+	hypothetical protein	NA	NA	NA	NA
WP_164455382.1\|1685156_1685474_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	6.4e-28	55.8
WP_164455384.1\|1685473_1686505_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	7.8e-123	62.3
WP_164455386.1\|1686504_1688292_-\|terminase	terminase	F1BUM5	Cronobacter_phage	1.0e-223	64.4
WP_164455387.1\|1688453_1689236_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	1.6e-43	42.9
WP_048608874.1\|1689257_1690286_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	7.0e-140	73.7
WP_164455406.1\|1690289_1690997_+\|terminase	terminase	F1BUM0	Cronobacter_phage	2.0e-61	53.0
WP_048608870.1\|1691098_1691323_+	hypothetical protein	NA	NA	NA	NA
WP_164455408.1\|1691336_1691789_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	3.2e-36	51.3
WP_164455410.1\|1691785_1692265_+\|tail	phage tail protein	NA	NA	NA	NA
WP_164455412.1\|1692254_1692968_+	hypothetical protein	F1BUL6	Cronobacter_phage	3.1e-70	59.5
WP_164455414.1\|1692980_1694099_+	DUF2586 family protein	F1BUL5	Cronobacter_phage	2.2e-131	63.7
WP_048608860.1\|1694098_1694554_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	1.2e-51	64.2
WP_048608858.1\|1694570_1694864_+\|holin	holin	Q6K1I2	Salmonella_virus	2.4e-13	48.8
WP_048608857.1\|1694860_1695271_+	structural protein	A0A0A0RQM4	Escherichia_phage	1.6e-26	46.2
WP_164455416.1\|1695267_1695645_+	hypothetical protein	F1BUL2	Cronobacter_phage	7.4e-23	50.9
WP_096864679.1\|1695746_1696010_+	hypothetical protein	A5X9I7	Aeromonas_virus	1.8e-20	61.9
WP_164455418.1\|1696197_1698297_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	4.7e-159	45.2
WP_048608849.1\|1698289_1698625_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	8.3e-34	68.3
WP_164455420.1\|1698614_1699805_+	hypothetical protein	F1BUK6	Cronobacter_phage	2.1e-143	62.3
WP_164455421.1\|1699791_1700409_+	hypothetical protein	F1BUK5	Cronobacter_phage	3.4e-65	62.4
WP_164455423.1\|1700421_1702464_+\|tail	phage tail protein	F1BUK3	Cronobacter_phage	1.0e-89	55.7
WP_164455426.1\|1702463_1703081_+\|tail	tail fiber assembly protein	Q9MCR5	Enterobacteria_phage	2.7e-30	40.4
WP_164456299.1\|1703125_1703839_+	hypothetical protein	F1BUK1	Cronobacter_phage	1.1e-35	36.2
WP_164455428.1\|1703783_1704350_+	hypothetical protein	F1BUJ9	Cronobacter_phage	1.3e-39	52.8
WP_164455430.1\|1704352_1706029_+	hypothetical protein	F1BUJ7	Cronobacter_phage	1.0e-135	49.4
WP_048607893.1\|1706584_1707097_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_004265004.1\|1707621_1708104_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	8.0e-30	47.4
1707209:1707254	attR	NA	NA	NA	NA
WP_004265003.1\|1708218_1708692_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_036959067.1\|1708684_1708981_+	RnfH family protein	NA	NA	NA	NA
WP_004265001.1\|1709154_1709547_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_144140241.1\|1709659_1711321_-	DNA repair protein RecN	NA	NA	NA	NA
WP_164455432.1\|1711407_1712307_-	NAD(+) kinase	NA	NA	NA	NA
WP_004264998.1\|1712408_1713002_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_110591984.1\|1713055_1713736_-	uracil-DNA glycosylase	A0A0R5YU95	Harp_seal_herpesvirus	6.6e-54	48.5
WP_036959024.1\|1714116_1714500_+	autonomous glycyl radical cofactor GrcA	A0A1W5N098	Cronobacter_phage	4.0e-32	69.2
WP_164455434.1\|1714658_1716104_+	phospholipase	NA	NA	NA	NA
WP_004264992.1\|1716136_1717474_-	ATP-dependent RNA helicase SrmB	A0A1V0SIR5	Klosneuvirus	1.3e-45	29.8
WP_036959023.1\|1717665_1718871_-	sodium/glutamate symporter	NA	NA	NA	NA
WP_110591980.1\|1719267_1720185_-	formimidoylglutamase	NA	NA	NA	NA
WP_004912819.1\|1720187_1720919_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_094961686.1\|1721077_1721812_+	methyltransferase	NA	NA	NA	NA
WP_164455436.1\|1721842_1723438_-	L-aspartate oxidase	NA	NA	NA	NA
WP_004264984.1\|1723832_1724411_+	RNA polymerase sigma factor RpoE	A0A0F6TH34	Sinorhizobium_phage	8.2e-05	26.2
WP_164455438.1\|1724469_1725093_+	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_004264982.1\|1725092_1726043_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_004264981.1\|1726046_1726511_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_036959062.1\|1726914_1728708_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	9.3e-23	24.8
WP_004264979.1\|1728725_1729691_+	signal peptidase I	NA	NA	NA	NA
WP_004264978.1\|1729993_1730674_+	ribonuclease III	E5EQH1	Micromonas_sp._RCC1109_virus	2.5e-21	32.4
WP_004264976.1\|1730670_1731579_+	GTPase Era	NA	NA	NA	NA
WP_004264975.1\|1731590_1732319_+	DNA repair protein RecO	NA	NA	NA	NA
WP_164455440.1\|1732607_1733339_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_164455442.1\|1733338_1733725_+	holo-ACP synthase	NA	NA	NA	NA
WP_036959019.1\|1733812_1734073_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	3.4e-19	53.5
WP_004264971.1\|1734614_1735064_-	hypothetical protein	NA	NA	NA	NA
WP_164455444.1\|1735244_1735892_+	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004264969.1\|1735987_1736470_+\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA

DBSCAN-SWA_2

2979286 : 3025141

Cronobacter_phage(50.0%)

plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004255990.1\|2979286_2979718_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004255992.1\|2979725_2981501_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_110591490.1\|2981464_2982502_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004908049.1\|2982507_2983773_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_004908047.1\|2983774_2984326_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004908045.1\|2984327_2985686_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004256004.1\|2985678_2986434_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_094960748.1\|2986442_2989064_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	3.2e-88	32.1
WP_004908041.1\|2989060_2989849_+	hypothetical protein	NA	NA	NA	NA
WP_004256010.1\|2989850_2990501_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_164455799.1\|2990506_2991955_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_144140137.1\|2991954_2995503_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_080544468.1\|2995536_2996892_+	hypothetical protein	NA	NA	NA	NA
WP_164455801.1\|2996884_2998621_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_164455803.1\|2999122_2999302_-	hypothetical protein	NA	NA	NA	NA
WP_164455804.1\|2999320_2999950_-	DUF1851 domain-containing protein	NA	NA	NA	NA
WP_094960742.1\|3000044_3000437_-	thioredoxin family protein	NA	NA	NA	NA
WP_164455806.1\|3000429_3001719_-	hypothetical protein	NA	NA	NA	NA
WP_094960741.1\|3001744_3002707_-	hypothetical protein	NA	NA	NA	NA
WP_140170760.1\|3002706_3004290_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_164455808.1\|3004290_3005310_-	3-oxoacyl-ACP synthase	NA	NA	NA	NA
WP_094960738.1\|3005311_3006364_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_094960737.1\|3006378_3006909_-	hypothetical protein	NA	NA	NA	NA
WP_164455810.1\|3006911_3009101_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004250011.1\|3009185_3009704_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_164455812.1\|3010318_3010894_-	YcxB family protein	NA	NA	NA	NA
WP_096864213.1\|3011099_3011564_-	hypothetical protein	NA	NA	NA	NA
WP_004256090.1\|3012688_3013018_+	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA
WP_004256093.1\|3013025_3013304_-	hypothetical protein	NA	NA	NA	NA
WP_036958162.1\|3013527_3013845_+	heat shock protein HspQ	NA	NA	NA	NA
WP_004256099.1\|3013928_3014342_-	CoA-binding protein	NA	NA	NA	NA
WP_004256102.1\|3014456_3014915_+	methylglyoxal synthase	NA	NA	NA	NA
WP_112308202.1\|3014971_3017023_-	DNA helicase IV	A7KV33	Bacillus_phage	7.9e-18	25.1
WP_140170768.1\|3017146_3019297_+	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_096864215.1\|3019392_3020007_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_036957904.1\|3020238_3020760_+	cell division inhibitor SulA	NA	NA	NA	NA
WP_004256113.1\|3021115_3022207_+	porin OmpA	NA	NA	NA	NA
WP_004256123.1\|3022378_3022846_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_071585857.1\|3023019_3023196_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_094960706.1\|3023404_3025141_+\|protease	Lon protease family protein	NA	NA	NA	NA

DBSCAN-SWA_3

3363389 : 3373970

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094961795.1\|3363389_3364601_+	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	2.3e-105	49.3
WP_004257083.1\|3364751_3365015_+	YbeD family protein	NA	NA	NA	NA
WP_036957959.1\|3365230_3365860_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_004257088.1\|3365983_3366949_+	lipoyl synthase	NA	NA	NA	NA
WP_004257099.1\|3367092_3367302_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	3.5e-22	78.1
WP_004257101.1\|3367518_3367977_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A2K9L300	Tupanvirus	7.1e-20	46.7
WP_036957963.1\|3368265_3368493_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	3.6e-17	56.2
WP_004257105.1\|3368501_3368915_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	1.4e-11	33.9
WP_004257107.1\|3368926_3371059_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-205	51.2
WP_112307280.1\|3371071_3372043_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	2.1e-133	71.9
WP_004257111.1\|3372770_3373970_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	2.6e-29	38.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage