CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP022373	Providencia rettgeri strain BML2531	1 crisprs	WYL,DEDDh,csa3,cas3,DinG	0	0	7	0
NZ_AP022376	Providencia rettgeri strain BML2531 plasmid pBML2531, complete sequence	1 crisprs	NA	0	1	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022373_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022373_1

1243565-1243721

Orphan

Consensus_repeat	Method
TATGTGACTAGGGTTGGCGAATGCAGCCAACAACGCTACGGCGTTAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022373_1

>merge|NZ_AP022373|1|1243565-1243721|CRISPRCasFinder
TATGTGACTAGGGTTGGCGAATGCAGCCAACAACGCTACGGCGTTAAGGACGAAGAATTAGCGGTGTAGCAAGGCGGCAAAAGTGCCAACTCCTAAGAGCATACAAAATATGTAACTAGGGTTGGCGAATGCAGCCAACAACGCTACGGCGTTAAGG

>NZ_AP022373|1|1|1243565-1243721|CRISPRCasFinder
TATGTGACTAGGGTTGGCGAATGCAGCCAACAACGCTACGGCGTTAAGG	ACGAAGAATTAGCGGTGTAGCAAGGCGGCAAAAGTGCCAACTCCTAAGAGCATACAAAA
TATGTAACTAGGGTTGGCGAATGCAGCCAACAACGCTACGGCGTTAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022373.1\|WP_036958297.1\|1231728_1232358_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226932
NZ_AP022373.1\|WP_004260566.1\|1249496_1250714_-\|Tm-1-like-ATP-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|179420
NZ_AP022373.1\|WP_110592266.1\|1251915_1252965_+\|AbrB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377472
NZ_AP022373.1\|WP_164564740.1\|1232828_1233824_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380511
NZ_AP022373.1\|WP_004260545.1\|1255999_1256545_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_AP022373.1\|WP_094960941.1\|1242484_1243453_+\|GTPase	unknown	unknown	gnl\|CDD\|183183
NZ_AP022373.1\|WP_036958296.1\|1253024_1253372_-\|YacC-family-pilotin-like-protein	unknown	unknown	gnl\|CDD\|370620
NZ_AP022373.1\|WP_164564749.1\|1253612_1255229_+\|multicopper-oxidase-CueO	unknown	unknown	gnl\|CDD\|236810
NZ_AP022373.1\|WP_004260588.1\|1240003_1242157_+\|carbon-starvation-protein-A	unknown	unknown	gnl\|CDD\|184976
NZ_AP022373.1\|WP_164564746.1\|1245246_1246593_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240539
NZ_AP022373.1\|WP_164565684.1\|1233855_1235310_-\|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl\|CDD\|224536
NZ_AP022373.1\|WP_136133972.1\|1246792_1247689_+\|diaminopimelate-dehydrogenase	unknown	unknown	gnl\|CDD\|273877
NZ_AP022373.1\|WP_004260586.1\|1242258_1242462_+\|YbdD/YjiX-family-protein	unknown	unknown	gnl\|CDD\|225434
NZ_AP022373.1\|WP_164564743.1\|1239118_1239574_+\|WG-repeat-containing-protein	unknown	unknown	unknown
NZ_AP022373.1\|WP_004260601.1\|1235549_1236497_+\|aminoimidazole-riboside-kinase	unknown	unknown	gnl\|CDD\|236514
NZ_AP022373.1\|WP_004260593.1\|1237718_1238897_+\|formate-dependent-phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|236454
NZ_AP022373.1\|WP_164564747.1\|1248656_1249484_-\|phosphoenolpyruvate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|378168
NZ_AP022373.1\|WP_004260597.1\|1236669_1237596_+\|EamA-family-transporter-RarD	unknown	unknown	gnl\|CDD\|225510
NZ_AP022373.1\|WP_004260548.1\|1255355_1255892_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_AP022373.1\|WP_004260563.1\|1251086_1251719_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102

Protein	Function_ID	Function_description	E-value
NZ_AP022373.1\|WP_036958297.1\|1231728_1232358_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|226932	COG4566, TtrR, Response regulator [Signal transduction mechanisms].	1.77131e-27
NZ_AP022373.1\|WP_004260566.1\|1249496_1250714_-\|Tm-1-like-ATP-binding-domain-containing-protein	gnl\|CDD\|179420	PRK02399, PRK02399, hypothetical protein; Provisional.	0
NZ_AP022373.1\|WP_110592266.1\|1251915_1252965_+\|AbrB-family-transcriptional-regulator	gnl\|CDD\|377472	pfam05145, AbrB, Transition state regulatory protein AbrB. Bacillus subtilis respond to a multitude of environmental stimuli by using transcription factors called transition state regulators (TSRs). They play an essential role in cell survival by regulating spore formation, competence, and biofilm development. AbrB is one of the most known TSRs, acting as a pleotropic regulator for over 60 different genes where it directly binds to their promoter or regulatory regions. Many other genes are indirectly controlled by AbrB since it is a regulator of other regulatory proteins, including ScoC, Abh, SinR and SigH. Hence, AbrB is considered a global regulatory protein controlling processes such as Bacillus subtilis growth and cell division as well as production of extracellular degradative enzymes, nitrogen utilization and amino acid metabolism, motility, synthesis of antibiotics and their resistant determinants, development of competence, transport systems, oxidative stress response, phosphate metabolism, cell surface components and sporulation. AbrB is a tetramer consisting of identical 94 residue monomers. Its DNA-binding function resides solely in the N-terminal domain (AbrBN) of 53 residues. Although it does not recognize a well-defined DNA base-pairing sequence, instead, it appears to target a very weak pseudo consensus nucleotide sequence, TGGNA-5bp-TGGNA, which allows it to be rather promiscuous in binding. The N-terminal domains of very similar sequences are present in two more Bacillus subtilis proteins, Abh and SpoVT. Mutagenesis studies suggest that the role of the C-terminal domain is in forming multimers.	6.9106e-52
NZ_AP022373.1\|WP_164564740.1\|1232828_1233824_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|380511	cd06288, PBP1_sucrose_transcription_regulator, ligand-binding domain of DNA-binding regulatory proteins specific to sucrose that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of DNA-binding regulatory proteins specific to sucrose that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	8.80504e-82
NZ_AP022373.1\|WP_004260545.1\|1255999_1256545_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	7.47068e-14
NZ_AP022373.1\|WP_094960941.1\|1242484_1243453_+\|GTPase	gnl\|CDD\|183183	PRK11537, PRK11537, putative GTP-binding protein YjiA; Provisional.	0
NZ_AP022373.1\|WP_036958296.1\|1253024_1253372_-\|YacC-family-pilotin-like-protein	gnl\|CDD\|370620	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS). This family comprises lipoproteins from four gamma proteobacterial species: PulS protein of Klebsiella pneumoniae (P20440), the OutS protein of Erwinia chrysanthemi (Q01567) and Pectobacterium chrysanthemi, and the functionally uncharacterized E. coli protein EtpO. PulS and OutS have been shown to interact with and facilitate insertion of secretins into the outer membrane, suggesting a chaperone-like, or piloting function for members of this family. In the pilotin from this four-helix protein from enterohemorrhagic Escherichia coli, the straight helix alpha2, the curved helix alpha3 and the bent helix alpha4 surround the central N-terminal helix alpha1. These helices create a prominent groove, mainly formed by side chains of helices 1,2 and 3 suggesting this groove is important as a binding site.	3.68999e-09
NZ_AP022373.1\|WP_164564749.1\|1253612_1255229_+\|multicopper-oxidase-CueO	gnl\|CDD\|236810	PRK10965, PRK10965, multicopper oxidase; Provisional.	0
NZ_AP022373.1\|WP_004260588.1\|1240003_1242157_+\|carbon-starvation-protein-A	gnl\|CDD\|184976	PRK15015, PRK15015, carbon starvation protein CstA.	0
NZ_AP022373.1\|WP_164564746.1\|1245246_1246593_-\|MATE-family-efflux-transporter	gnl\|CDD\|240539	cd13134, MATE_like_8, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	4.4642e-175
NZ_AP022373.1\|WP_164565684.1\|1233855_1235310_-\|glycoside-hydrolase-family-32-protein	gnl\|CDD\|224536	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism].	3.98789e-172
NZ_AP022373.1\|WP_004260593.1\|1237718_1238897_+\|formate-dependent-phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|236454	PRK09288, purT, formate-dependent phosphoribosylglycinamide formyltransferase.	0
NZ_AP022373.1\|WP_004260586.1\|1242258_1242462_+\|YbdD/YjiX-family-protein	gnl\|CDD\|225434	COG2879, COG2879, Uncharacterized small protein [Function unknown].	9.01001e-32
NZ_AP022373.1\|WP_004260563.1\|1251086_1251719_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	8.45161e-07
NZ_AP022373.1\|WP_004260601.1\|1235549_1236497_+\|aminoimidazole-riboside-kinase	gnl\|CDD\|236514	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional.	1.19348e-127
NZ_AP022373.1\|WP_136133972.1\|1246792_1247689_+\|diaminopimelate-dehydrogenase	gnl\|CDD\|273877	TIGR01921, Meso-diaminopimelate_D-dehydrogenase, diaminopimelate dehydrogenase. This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.	6.94542e-113
NZ_AP022373.1\|WP_164564747.1\|1248656_1249484_-\|phosphoenolpyruvate-hydrolase-family-protein	gnl\|CDD\|378168	pfam09370, PEP_hydrolase, Phosphoenolpyruvate hydrolase-like. This domain has a TIM barrel fold related to IGPS and to phosphoenolpyruvate mutase/aldolase/carboxylase.	0
NZ_AP022373.1\|WP_004260597.1\|1236669_1237596_+\|EamA-family-transporter-RarD	gnl\|CDD\|225510	COG2962, RarD, Predicted permeases [General function prediction only].	2.68451e-79
NZ_AP022373.1\|WP_004260548.1\|1255355_1255892_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	2.97649e-93

>NZ_AP022373.1|WP_094960941.1|1242484_1243453_+|GTPase
MKPISVTILTGFLGAGKTTLLSHILHAEHGHKIAVIENEFGEVPIDNAIIGDRATQITTLSNGCICCSRSNELENALLDLLDGLDSGKLDFDRLLIECTGMADPGPITQTFFSHEVLCERYVLDGIITLVDAVHADKQLNDFAIAQAQIGYADRILLTKTDIEPNNEALIERLQRINARAPIYPVIHGDIDLSMLLDIDGFLLDSQLNVKQPTFRFAPKQQNEVGSIVLEFNYPVELMAVSQVMEELLLGFADNLLRYKGILSIVNEPKRLLFQGVQRLYSADWDRDWEVDEQRRSVLVFIGIDLPEEMIREKFAALEVNSK
>NZ_AP022373.1|WP_004260586.1|1242258_1242462_+|YbdD/YjiX-family-protein
MFGNLGKTGKYLGQAARMLIGIPDYDTYVQHMSDNHPDKPVMTYKEFFRERQDARYGGSGKGGFRCC
>NZ_AP022373.1|WP_004260588.1|1240003_1242157_+|carbon-starvation-protein-A
MNKNGILKHIPWMILGIIGAVCLGVVALRRGEHISALWIVVASVAVYLIAYRYYSLYIAKKVMKLDETRATPAVINNDGLNYVPTNKNVLFGHHFAAIAGAGPLVGPVLAAQVGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEIVKEELGPIPGTLALFGCFLIMIIILAVLALIVVKALAESPWGVFTVVSTVPIALFMGIYMRYIRPGRVGEVSVIGIVLLVASIWFGGVIAHDPYWGPALTFKDTTITYALVGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLAIGIVILNPELKMPAVTQFVDGSGPVWKGTLFPFLFITIACGAVSGFHALISSGTTPKLLANEKDARYIGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPAALGITMPNLHELGGPDGAAIMAQLKDVSVHAAATVSSWGFVISPEQIMQTAKDIGEPSVLNRAGGAPTLAVGIAYVFHEIMPAANMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFVPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLSTVVLIKMKRSKYIMVTVLPAVWLLICTTWALGLKLFSDNPQLEGFLYLAKSYKDKIAAGGAELTAQEITNMNHIIINNYTNAGLSILFLVVVYGIIFYGIRVGMKAHKNPERTDKETPYVPVPKEGVKVSSSH
>NZ_AP022373.1|WP_164564743.1|1239118_1239574_+|WG-repeat-containing-protein
MMIHYVVGLMSLGLISFLSTAQNLEQQFSLWVENEKDKIECFEQQSSFKYCLGKSSNKGLAVFDQKGQEIYQLYYFDNWPDEAHDGVYRIRKENKIGFADAITGEIVVDAIYDCAYPFEAGKAKVGIGCETQTDGEHSWWVGGKWTTITRQ
>NZ_AP022373.1|WP_004260593.1|1237718_1238897_+|formate-dependent-phosphoribosylglycinamide-formyltransferase
MNQLGTALCKSATKVMLLGAGELGKEVAIECQRLGIEVIAVDRYDNAPAMHIAHRSYTINMLDGEALKQIVSREKPDIIVPEIEAIATQVLMELEQQGQKVVPSAKAIVLTMDREGIRRLAAEELKLPTSEYQFVDSNPDFIAAAEKIGFPCIVKPVMSSSGKGQSVIRSRAELDQAWDYSQQGGRAGQGRVIVEKMVNFDFEITLLTVSAVDGIHFCAPIGHRQEKGDYRESWQPQYMSEAALKKAQDIAKKIVTSLGGYGIFGVELFVCGDDIIFNEVSPRPHDTGMVTLISQSLSEFALHVRAFLGFPIGVIRQYGPSASAVILPNLQSQNVVFSNIGAALGSDTQLRLFGKPEIAGTRRLGVALAIADSIENALDMAKKTANTVCVSG
>NZ_AP022373.1|WP_004260597.1|1236669_1237596_+|EamA-family-transporter-RarD
MLLRSGVALAIFSYILWGITPLFYRLLPGAEPLELLAERLIWSVPILFLVRLIIKNKSLWREVWSDKQSIILCLFSSSVMAISWTTFTYALTHGQVLAASLGYFINPLFSILLGVLFLRERLVFAEKMAVIFICAGVGYQIWQYGELPILALVMGSAFAVYGLIRKFIRFDVITSLFLEALWLLPIAIAITWWLASHGLSAVTQGDWQIKVLYMLAAPVTIIPLLFFTAAIKRTSLTVIGLAQYIEPTIQFLLAVFLFNELFDWVKGISFSLIWIGLMFCVLAILRKQYIKFSHKEPFITGRDKTPLD
>NZ_AP022373.1|WP_004260601.1|1235549_1236497_+|aminoimidazole-riboside-kinase
MKVWALGDAVIDLIPLQNMQYEACAGGAPVNVAAGVARLGQNSGFIGRVGEEAFGHFMQKTLFDIGVDTSAMEFDEKYKTSTVLVSLHENGEREFSFLVSPSADQFLTINNLPQFGNDILHFCSLALVHHQCRASLSTAIEQLKLAGGLLSFDINIRPQMWSDPDEMHQIVDNFAKQADILKLSDDELLWLTQESRFENAIAKLQNYPAQLKIVTQGAKGCQVFTPSVQIAVSAYLVESIDTTGAGDAFMAGLLAAISQYGLVNEKEGLMKVISQATACGALATTKKGAIAAAPTQQELFVFMQQQPPLHQRDVF
>NZ_AP022373.1|WP_164565684.1|1233855_1235310_-|glycoside-hydrolase-family-32-protein
MKKQLELANEAIKTARKNMDLQFYPQYHLAPYAGWMNDPNGLIYHQGQYHAFYQHHPFSAIWGPMHWGHATSTDMVHWEHQAIALAPSEDYDRDGCFSGSAISYDNKLYLFYTGHIWLANPGDDSQIIQSQCVAISEDGIHFEKKGVVLSAPDGYMHFRDPKVWRQDGKWWMVVGARDSQDQGQILLFKSTDLLNWDQNYQVLAKTDDDNVYMWECPDFFPLGEQFVALFSPQGKKAKNYQYRNLFQNGYLVGNWSPNSSYKISHAFTELDFGQDFYAPQTFLAKDGRRIAIAWMDMWESHMPTQKHGWSGCFTLPRELTLNEQGKIIAKPIEELKTLRQSASHFPATTLAKNSTIILNENATSCEIELIWDLQQSPAEKFGFWVGYGVQFYIDNQSQQLTLMRHYPEYTISDSRCAPIPEGHQLKINAFIDHSSLEVFINDGELNFSCRIYPHQSERDLRLFAINQQAKLEKAIYWEIKKSIE
>NZ_AP022373.1|WP_164564740.1|1232828_1233824_+|substrate-binding-domain-containing-protein
MASLKDVARLANVSLMTVSRAINSPELLKPETLKQVQQAIESLNYVPDFSARKIRGKSSRVSTVGVLALDTATTPFSVEIILSIEQTARQFGWSSFVVNITSSEDSERAVRQLLSQRPDGIIYTTMGLREVAIPETLHNNRLVLANCIDKNGQFPAYVPDDFNGQFNAVKRLIEKGYRNPLCLYIPQETLAGKMRREAVESAWASADLPLASLQQHHLELGDEHYLDVIALIDSHFKNKKPNFDVIICGNDRIAFLAYQVLLSRGLRIPQDIAVLGYDNMIGVGELFYPPLSTVVLPHYQLGQQAALHIIEERQQNSVEYVACDLLERNSF
>NZ_AP022373.1|WP_036958297.1|1231728_1232358_-|helix-turn-helix-transcriptional-regulator
MNNTIHVIVESDNVFKNKLKLMMESFGFIFRFYNNEEVFMSNYTYPNEGNVKECILLFLNNDENRINRLNNINNSFGIVPFIVLAEEPSISLCRESFKSGAFDFFPFPFKNIEISNSISNAMELFLSMHEKHKKYTHLSDKFNRLSVREREIMDMILEGNTSKETAEKLSLSPRTVEVHRSNIYTKLGIKSLPQLIQEYEYINTYPRYI
>NZ_AP022373.1|WP_164564746.1|1245246_1246593_-|MATE-family-efflux-transporter
MHQSDVTERSLFSLSWPIFIDIFLHLATLLINTYMVSHVSTAYLAAMGVGNQVFDLFITIFNFISVGCSVVIAQYLGAGRREKASQAIHISIAFNFILGFSSALVALFFGYSILTIMNMPSHLMADGYTYLRILGICLIPEAISIILAACLRVYGKAQPAMWVTLIANVITVFGNIIVLYGFFGLPQYGLEGVAWSTVVGRIVAVILLFCLLFYGLRIKFIPMMLIHWSRKMLGKILHIGLPSAGENLVWILHFMTASAFIGLMGETSLAAQTLYFQLSLFIMLFGISISIGNEIMVGHLVGAKRFEDAFRRGVKSLKMGFYVTIGVVIAFWLFRDPILNNITDDQGIIKVLLPLFLLSVFLEPGRTINIVMVNALRASGDARFPLCTAIIFMWGVAIPLGYFLGIKMEMGLLGIWLGFFADEWLRGLTNAWRWRSRKWQSKRLDVES
>NZ_AP022373.1|WP_136133972.1|1246792_1247689_+|diaminopimelate-dehydrogenase
MTKIKAAIVGYGNIGRYALEAVLAAEDFELVGVVRRNTQDIPAELSGYKVVDDIEKLGKVDVALLCSPTRAIGPLAAKVLSLGINTVDSFDVHSDIVALKHSLDDVAKQHNSVAVVSAGWDPGSDSIMRTLMLAMAPKGVTYTNFGPGMSMGHSVAAKAINGVKDALSVTIPLGTGVHRRMVYVELDGGAKFDEVAQAIKADSYFSSDETHIRQVDSIDALKDVGHGVHMTHKGVSGATHNQLFEYSMRINNPALTSQFMVSAARATMKQAAGAYTVIEIPPVNFLQGDLDTLIAKLV
>NZ_AP022373.1|WP_164564747.1|1248656_1249484_-|phosphoenolpyruvate-hydrolase-family-protein
MKHNRADLLKKFRDMIARGEPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANEIVMDMAKEVLPVVKHTPVLAGVNGTDPFCQFDKFLDDIKATGFAGVQNFPTVGLIDGNFRSNLEETGMGYGLEVEMIRLAHEKDLLTTPYVFSAEDAIAMTKAGADIIVPHMGLTTGGNIGAETALTLKDCVPLINEWAKAAKSVREDVIVLCHGGPIATPEDAEYILANCPDCHGFYGASSMERLPTEVALTATTQKFKSITR
>NZ_AP022373.1|WP_004260566.1|1249496_1250714_-|Tm-1-like-ATP-binding-domain-containing-protein
MKKHPGFIYIVTTLDTKSAELFYVSELIKNAGLAVRTVDLTTQPTQLEKNADISAHTVASFHPLGTEAVFCGDRGKAIEAMAHAFSLYLAAQTDVAAILGLGGSGGTALITPAMQVLPVGIPKLMVSTMASGDISGYIGASDISMMYSVTDVSGLNIISRKVLKNAANQIAGAVWFDDEEQPHDLKPAIALTMFGVTTPCVQQLTTELEAQYDCLVFHATGSGGKAMEKLIDSQLLHSVLDITTTEVCDYLFGGVLACDEDRFGAIERTQTPCVMSCGALDMVNFGRPSTVPEHYQNRLFYHHNAQVTLMRTTKEENQQMGRWIAEKLNRCNGEVRFIIPTAGFSALDVDGAPFWDPIADQAFIDALTANLIITEKRQLILSPYHINSTEFCDQVIQLHQEILNK
>NZ_AP022373.1|WP_004260563.1|1251086_1251719_+|TetR/AcrR-family-transcriptional-regulator
MSKTNSHSEYKGTRKRTYVLLIKTALDLFEKGAMPSVSELALEAGVSRATAYRYFPTQADLITATVNESLGPILTWRPQSEQTEERIDELLTYAFPRMFEHEGVLRAALQVSLQQWAQGRAAPQSIKDKRLERGNRKEILAMVTSPMKSEYPQEIIDKVIRAFSVIYGSEIFLVLKDIWKMDDAQVTQLAQWMSKAVMNQAHADNIKRRK
>NZ_AP022373.1|WP_110592266.1|1251915_1252965_+|AbrB-family-transcriptional-regulator
MKKLLKMIGGISICALIGGGLTYLGVPLALMFGPIIAIIIFHRFGISFAIPKHTISFVQVTLGTSVGLMFNQVSLNEADNLFLLLLMLVVCLAVQFSFSFFWFYRKVGWTKQEAMLGSVPGAMAAILALTDHTHTPPQKIVISHTIRLIILILLAGIVVGSDGDPQPIIELPELTLISTGWLLLIIAVGVISGAILQRLKVPAPFMLTSLAAATLIQGWADIPLNFPLMLTELSMVLIGMNIGNHFIVFPLSSLIKNIYSSAQVVVVNIVLTFLITVFASWITGYDISVLLLAWAPGSMEAMTFAAITMNLDAGFVMSNHIIRMVIIQSIPSIALFWQERRQKRKNNLE
>NZ_AP022373.1|WP_036958296.1|1253024_1253372_-|YacC-family-pilotin-like-protein
MRKFILMSCLMTLLGITNSVRALSNNEAEDLADLTAVFIYLKYDCGYSQIPDREIERAIVYFAKSNKWDLSNYNAEKMTALNKESYSDLKGIPLTTEFKCQSLARDSLGLFAYVK
>NZ_AP022373.1|WP_164564749.1|1253612_1255229_+|multicopper-oxidase-CueO
MLRRDFLKLSAITYAASALPIWSRIAVAAGNYPTLAIPPLLEPDAQGNIQVVIQQGVSQFVPGKQTTTWGYNGNLLGPAISLKNGQNVNINIINKLAEDTTVHWHGLEISGEQDGGPQAIIQPDTSRKVNFTVNQSEATCWFHPHTHGKTGYQVAMGLAGLVLIKDDDSTKRGLPSDWGVDDIPVILQDKRLKDDGQIDYQLDVMSAAVGWFGDIMLTNGAVYPKHVAPKGWLRLRLLNGCNARSLNISTSDGRKMYVVASDGGLLAEPIAVTELPILMGERFEVLIDASDGRAFDLVTLPVGQMGMTIAPFDQPLPVLRIETTLTKGEGDLPSTLAAMSAIPSLAGLNRRRFHLMMDMRLDMQGMMMLREKYGDQAMGNMGGHGAMMGNMNHGNMNAGNMNHGNMNGKMGSGGHCGTGSDGLDIHNANTINGQVFSMTHPAFNAPMNQQEIWVVSGRGDMMLHPFHVHGTRFRILKENGQAVAPHRQGWKDIVKVEGQVSEILVEFKHPATQQHPYMAHCHLLEHEDTGMMLGFTVS
>NZ_AP022373.1|WP_004260548.1|1255355_1255892_+|hypoxanthine-phosphoribosyltransferase
MKHTLEVMISEEEIAQRISELADKISAHYQKLDGELVLVGLLKGSFIFMADLCRKIDVPHEVDFMTVSSYGNAMTSSRDVKIVKDLDEDIRDKHVLIVEDIIDSGNTLNKVREIFELRGPKSVAICTLLDKPSRREVQVPVEWIGYSIEDKFVVGYGIDYAQQYRHLPYIGHVTLLEE
>NZ_AP022373.1|WP_004260545.1|1255999_1256545_-|type-1-fimbrial-protein
MNKKTQYAIHCFVIMTSLFSFKSFGYDAVFNITGRVSSNTCSVQSSRIQNVHLGDYTIGQSGFGSGVNTQSKDVRWQIDFDCDKDTKINIALQGRQYSGSNTVLDIDNSSDRARGVGIRIEYSNDRTLWYRMGIGGRGTLVSPSNVDGKLSIYFNSYYIQMEKTILPGKANATMDVEVTYE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

585446 : 593879

Escherichia_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164564482.1\|585446_587864_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	7.6e-137	36.2
WP_004261008.1\|587860_588499_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.2e-62	55.3
WP_094961424.1\|588495_589395_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_004260986.1\|589433_590000_+	twin-arginine leader-binding protein DmsD	A0A077SLS7	Escherichia_phage	8.6e-15	31.6
WP_036958333.1\|590206_590629_+	DoxX family protein	NA	NA	NA	NA
WP_004260980.1\|590712_591507_-	nucleotidyltransferase domain-containing protein	A0A2D1GQQ2	Pseudomonas_phage	1.2e-43	43.0
WP_110592488.1\|591531_592758_-	RtcB family protein	A0A1V0EEW8	Caulobacter_phage	9.5e-136	62.9
WP_004260972.1\|592760_593879_-	slipin family protein	A0A2P1EMF1	Moumouvirus	4.9e-14	26.9

DBSCAN-SWA_2

1758794 : 1804040

Pectobacterium_phage(17.07%)

integrase,tail,lysis,head,tRNA,terminase

attL 1744039:1744052|attR 1765285:1765298

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1744039:1744052	attL	NA	NA	NA	NA
WP_164565049.1\|1758794_1760036_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	1.4e-105	48.3
WP_164565051.1\|1760350_1761751_-	hypothetical protein	NA	NA	NA	NA
WP_164565053.1\|1761889_1763074_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	2.8e-153	68.7
WP_068445436.1\|1763028_1763238_-	excisionase	I6PBM8	Cronobacter_phage	6.8e-18	60.9
WP_164565056.1\|1763282_1763489_-	hypothetical protein	H9C154	Pectobacterium_phage	2.0e-06	47.5
WP_164565059.1\|1763731_1763902_-	hypothetical protein	NA	NA	NA	NA
WP_164565064.1\|1763931_1764111_-	hypothetical protein	NA	NA	NA	NA
WP_110732079.1\|1764156_1764657_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	3.5e-52	66.3
WP_164565067.1\|1764656_1766627_-	hypothetical protein	H9C157	Pectobacterium_phage	3.1e-120	37.7
1765285:1765298	attR	NA	NA	NA	NA
WP_164565068.1\|1766639_1766972_-	hypothetical protein	NA	NA	NA	NA
WP_048607774.1\|1767525_1768683_-	type I restriction enzyme R protein	A0A1S5SAB0	Streptococcus_phage	2.2e-33	27.8
WP_048607772.1\|1768692_1769385_-	helix-turn-helix transcriptional regulator	M9NZE3	Enterobacteria_phage	8.2e-68	54.9
WP_048607770.1\|1769489_1769699_+	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	1.3e-16	64.2
WP_068445417.1\|1769770_1770226_+\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	9.2e-28	52.1
WP_164565069.1\|1770243_1770468_+	hypothetical protein	H9C163	Pectobacterium_phage	9.2e-13	48.6
WP_164565070.1\|1770469_1771426_+	hypothetical protein	U5P0A0	Shigella_phage	8.7e-44	54.2
WP_164565071.1\|1771422_1772160_+	DNA replication protein	A0A2H4J1B6	uncultured_Caudovirales_phage	4.8e-34	36.9
WP_164565690.1\|1772214_1772385_+	palmdelphin	NA	NA	NA	NA
WP_164565072.1\|1772387_1772618_+	hypothetical protein	NA	NA	NA	NA
WP_164565073.1\|1772731_1772902_+	hypothetical protein	NA	NA	NA	NA
WP_164565074.1\|1772929_1773268_+	hypothetical protein	H9C172	Pectobacterium_phage	4.2e-33	63.0
WP_164565075.1\|1773345_1773939_+	DUF1367 family protein	H9C173	Pectobacterium_phage	2.3e-63	58.2
WP_164565076.1\|1773950_1774265_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	1.2e-34	69.8
WP_164565077.1\|1774252_1774783_+	DUF1133 family protein	I6S672	Salmonella_phage	2.6e-37	53.3
WP_164565078.1\|1774946_1775141_+	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	5.0e-07	60.8
WP_164565691.1\|1775296_1776334_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	1.0e-138	73.9
WP_164565079.1\|1777038_1777308_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	4.8e-24	64.4
WP_164565080.1\|1777307_1777778_+	lysozyme	A0A1W6JNW4	Morganella_phage	9.5e-44	55.9
WP_164565081.1\|1777759_1777933_+	hypothetical protein	NA	NA	NA	NA
WP_164565082.1\|1777953_1778403_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	1.4e-12	42.6
WP_048607741.1\|1779469_1779601_-	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_164565083.1\|1780002_1780245_+	hypothetical protein	NA	NA	NA	NA
WP_110592070.1\|1780649_1780922_+	hypothetical protein	NA	NA	NA	NA
WP_110592069.1\|1781003_1782032_+\|terminase	terminase small subunit	C5IHM0	Burkholderia_virus	5.0e-37	40.6
WP_110592068.1\|1782028_1782664_-	response regulator	NA	NA	NA	NA
WP_110592067.1\|1782902_1784300_+\|terminase	phage terminase large subunit	A0A2K9V3I6	Faecalibacterium_phage	3.0e-85	40.3
WP_164565084.1\|1784304_1785807_+	DUF1073 domain-containing protein	A0A2H4P6S9	Pseudomonas_phage	6.9e-104	43.4
WP_110592065.1\|1785844_1786573_+\|head	phage head morphogenesis protein	Q6IWU3	Burkholderia_phage	3.5e-37	39.4
WP_110592064.1\|1786569_1787826_+	DUF2213 domain-containing protein	A0A2H5BG39	Pseudoalteromonas_phage	1.6e-37	45.6
WP_110592063.1\|1787825_1788323_+	hypothetical protein	NA	NA	NA	NA
WP_042844781.1\|1788322_1789390_+	DUF2184 domain-containing protein	A0A088C493	Shewanella_sp._phage	4.4e-52	36.6
WP_105881054.1\|1789444_1789786_+	hypothetical protein	Q6IWU7	Burkholderia_phage	1.0e-07	34.5
WP_110592606.1\|1789788_1790220_+	DUF4054 domain-containing protein	Q6IWU8	Burkholderia_phage	2.0e-11	33.8
WP_164565085.1\|1790219_1790678_+	hypothetical protein	NA	NA	NA	NA
WP_110592061.1\|1790677_1791046_+	hypothetical protein	NA	NA	NA	NA
WP_110592060.1\|1791035_1791551_+	hypothetical protein	NA	NA	NA	NA
WP_110592059.1\|1791560_1793048_+	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	2.0e-79	37.0
WP_068445366.1\|1793057_1793510_+	hypothetical protein	I7ATP4	Escherichia_phage	1.8e-23	38.9
WP_109911397.1\|1793560_1794019_+	hypothetical protein	Q6IWV4	Burkholderia_phage	3.7e-24	47.7
WP_110592605.1\|1794485_1796612_+	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	3.0e-20	26.8
WP_110592058.1\|1796608_1797136_+	hypothetical protein	NA	NA	NA	NA
WP_096863415.1\|1797139_1797433_+	hypothetical protein	NA	NA	NA	NA
WP_110592057.1\|1797425_1798241_+	hypothetical protein	B5M9T8	Pseudomonas_phage	6.3e-19	28.5
WP_110592056.1\|1798244_1798937_+	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	1.4e-30	40.8
WP_110592055.1\|1798933_1799278_+	hypothetical protein	Q6IWQ2	Burkholderia_phage	2.4e-12	36.6
WP_110592054.1\|1799270_1800458_+	hypothetical protein	A0A2H5BG53	Pseudoalteromonas_phage	2.2e-76	38.9
WP_110592053.1\|1800454_1801114_+	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	2.1e-41	41.3
WP_110592052.1\|1801119_1802640_+\|tail	phage tail protein	A0A0F6R6B6	Escherichia_coli_O157_typing_phage	5.1e-30	40.6
WP_004265004.1\|1803557_1804040_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	8.0e-30	47.4

DBSCAN-SWA_3

1953928 : 2001484

Salmonella_phage(28.85%)

terminase,capsid,lysis,integrase

attL 1953074:1953133|attR 2001595:2001662

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1953074:1953133	attL	NA	NA	NA	NA
WP_154633739.1\|1953928_1954117_-	lipoprotein	E9NIE1	Enterobacter_phage	6.1e-18	67.8
WP_164565103.1\|1954109_1954283_-	hypothetical protein	NA	NA	NA	NA
WP_164565104.1\|1954282_1954837_-	hypothetical protein	NA	NA	NA	NA
WP_164565105.1\|1954823_1954988_-	hypothetical protein	A0A1P8DTI7	Proteus_phage	1.1e-18	90.0
WP_164565106.1\|1955252_1955519_-	hypothetical protein	A0A1P8DTI8	Proteus_phage	7.6e-06	39.6
WP_164565107.1\|1955518_1955806_-	hypothetical protein	A0A109QIR8	Bacillus_phage	2.5e-07	35.4
WP_164565108.1\|1955805_1956096_-	hypothetical protein	NA	NA	NA	NA
WP_164565694.1\|1956130_1956253_-	hook protein	NA	NA	NA	NA
WP_164565109.1\|1956443_1956611_-	hypothetical protein	NA	NA	NA	NA
WP_164565110.1\|1956627_1957176_-	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	6.9e-54	58.8
WP_164565111.1\|1957168_1957798_-	YqaJ viral recombinase family protein	S0A2A9	Cellulophaga_phage	9.4e-47	48.8
WP_164565112.1\|1957778_1958303_-	hypothetical protein	A0A0F7L6F4	uncultured_marine_virus	5.1e-14	37.2
WP_129467336.1\|1958302_1958527_-	hypothetical protein	NA	NA	NA	NA
WP_164565113.1\|1958523_1958724_-	hypothetical protein	NA	NA	NA	NA
WP_164565114.1\|1958944_1959514_-	hypothetical protein	NA	NA	NA	NA
WP_164565115.1\|1959576_1959798_-	hypothetical protein	A0A1W6JNZ6	Morganella_phage	1.5e-15	56.9
WP_164565116.1\|1959810_1960149_-	hypothetical protein	A0A1P8DTE8	Proteus_phage	2.5e-06	35.1
WP_164564165.1\|1960157_1960403_-	hypothetical protein	A0A1B0V7L5	Salmonella_phage	1.0e-09	41.5
WP_164565117.1\|1960745_1960922_-	hypothetical protein	NA	NA	NA	NA
WP_164565118.1\|1960954_1961500_-	pentapeptide repeat-containing protein	Q8HAH0	Salmonella_phage	1.5e-32	77.3
WP_164565119.1\|1961602_1961773_-	hypothetical protein	Q7Y3M0	Enterobacteria_phage	9.1e-13	71.2
WP_164565120.1\|1961775_1962057_-	hypothetical protein	A0A1P8DTK1	Proteus_phage	7.9e-30	79.3
WP_164565121.1\|1962443_1963091_-	helix-turn-helix domain-containing protein	A5VW98	Enterobacteria_phage	1.3e-75	64.6
WP_164565122.1\|1963171_1963357_+	hypothetical protein	A5VW97	Enterobacteria_phage	5.4e-11	54.1
WP_164565123.1\|1963473_1963800_+	hypothetical protein	A0A1W6JNY4	Morganella_phage	5.8e-40	75.0
WP_164565124.1\|1963830_1963995_+	hypothetical protein	NA	NA	NA	NA
WP_164565125.1\|1963991_1964180_+	hypothetical protein	G9L679	Escherichia_phage	3.0e-09	52.7
WP_164565126.1\|1964172_1965042_+	replication protein	A0A088CPU2	Enterobacteria_phage	6.8e-88	61.0
WP_164565127.1\|1965156_1967043_+	AAA family ATPase	I6S1U6	Salmonella_phage	1.8e-271	69.3
WP_164565128.1\|1967068_1967272_+	hypothetical protein	NA	NA	NA	NA
WP_164565129.1\|1967303_1967573_+	hypothetical protein	A0A1X9Y877	Proteus_phage	1.7e-21	58.4
WP_164565130.1\|1967572_1967743_+	hypothetical protein	NA	NA	NA	NA
WP_164565131.1\|1967990_1968233_+	hypothetical protein	NA	NA	NA	NA
WP_164565132.1\|1968219_1968459_+	hypothetical protein	NA	NA	NA	NA
WP_164565133.1\|1968455_1968806_+	hypothetical protein	NA	NA	NA	NA
WP_164565134.1\|1968766_1969168_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	5.7e-21	47.3
WP_164565135.1\|1969169_1969616_+	recombination protein NinB	A0A1W6JNZ4	Morganella_phage	2.4e-36	56.0
WP_164565136.1\|1969636_1969885_+	DUF3310 domain-containing protein	A0A0A6Z5B6	Enterobacter_phage	2.2e-23	72.5
WP_164565137.1\|1970133_1970508_+	hypothetical protein	NA	NA	NA	NA
WP_164565138.1\|1970576_1970879_+	hypothetical protein	NA	NA	NA	NA
WP_164565139.1\|1970878_1971169_+	DUF1364 domain-containing protein	A0A220NQY2	Salmonella_phage	2.9e-35	76.0
WP_164565140.1\|1971165_1971531_+	RusA family crossover junction endodeoxyribonuclease	E5AGG1	Erwinia_phage	6.9e-42	68.6
WP_164565141.1\|1971520_1971715_+	protein ninH	Q777W6	Enterobacteria_phage	2.8e-10	60.4
WP_164565695.1\|1971906_1972299_+	hypothetical protein	F1C5D0	Cronobacter_phage	8.5e-14	35.0
WP_071548375.1\|1972904_1973318_+	hypothetical protein	NA	NA	NA	NA
WP_164565142.1\|1973314_1973617_+	hypothetical protein	NA	NA	NA	NA
WP_140180794.1\|1973579_1973972_+	M15 family metallopeptidase	E7C9S9	Salmonella_phage	1.4e-56	84.5
WP_164565143.1\|1973968_1974421_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	9.5e-33	53.8
WP_164565144.1\|1974705_1975245_+	Rha family transcriptional regulator	A0A0P0ZFJ1	Escherichia_phage	1.6e-63	65.2
WP_105881132.1\|1975255_1975489_+	hypothetical protein	NA	NA	NA	NA
WP_164565145.1\|1975547_1975799_+	hypothetical protein	NA	NA	NA	NA
WP_164565146.1\|1975822_1976050_+	hypothetical protein	NA	NA	NA	NA
WP_126459730.1\|1976118_1976364_+	DUF2560 family protein	NA	NA	NA	NA
WP_164565147.1\|1976420_1977053_+\|terminase	terminase small subunit	A0A2R3UAN5	Myoviridae_environmental_samples	9.5e-39	48.4
WP_164565148.1\|1977036_1978521_+	DNA-packaging protein	G0ZND4	Cronobacter_phage	9.4e-247	84.1
WP_164565149.1\|1978524_1979901_+	DUF1073 domain-containing protein	I6R9A1	Salmonella_phage	8.1e-168	65.7
WP_164565150.1\|1979836_1980766_+\|capsid	minor capsid protein	A0A1V0E5Q2	Salmonella_phage	8.6e-89	55.3
WP_164565151.1\|1980768_1982055_+	hypothetical protein	G0ZND7	Cronobacter_phage	3.2e-150	63.1
WP_164565152.1\|1982054_1982492_+	hypothetical protein	I6S1Q2	Salmonella_phage	1.6e-48	71.9
WP_164565153.1\|1982507_1983602_+	hypothetical protein	G0ZND9	Cronobacter_phage	1.3e-149	71.3
WP_164565154.1\|1983611_1983785_+	glycoprotein	I6R9A3	Salmonella_phage	1.9e-10	61.4
WP_164565155.1\|1983841_1984243_+	hypothetical protein	I6S619	Salmonella_phage	2.3e-54	77.4
WP_164565156.1\|1984239_1984608_+	hypothetical protein	I6S1Q5	Salmonella_phage	4.4e-36	60.7
WP_164565157.1\|1984609_1985047_+	HK97 gp10 family phage protein	A0A1V0E5P5	Salmonella_phage	7.0e-33	56.1
WP_164565158.1\|1985043_1985412_+	hypothetical protein	NA	NA	NA	NA
WP_164565159.1\|1985480_1986236_+	DNA breaking-rejoining protein	A0A1W6JNT1	Morganella_phage	2.7e-80	61.8
WP_164565160.1\|1986284_1986971_+	hypothetical protein	A0A1W6JNX2	Morganella_phage	7.5e-90	69.7
WP_164565161.1\|1986984_1987380_+	hypothetical protein	NA	NA	NA	NA
WP_164565162.1\|1987578_1988631_-	hypothetical protein	I6S627	Salmonella_phage	1.7e-61	58.4
WP_081335999.1\|1988701_1988860_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_164565163.1\|1988973_1989219_+	Arc family DNA-binding protein	A5VW60	Enterobacteria_phage	5.9e-05	39.7
WP_164565164.1\|1989215_1989629_+	hypothetical protein	NA	NA	NA	NA
WP_164565165.1\|1989609_1990011_+	hypothetical protein	NA	NA	NA	NA
WP_070929154.1\|1990078_1990669_+	hypothetical protein	NA	NA	NA	NA
WP_164565166.1\|1990679_1991072_+	hypothetical protein	NA	NA	NA	NA
WP_164565167.1\|1991148_1994181_+	hypothetical protein	A0A1V0E5N4	Salmonella_phage	5.0e-53	53.7
WP_006661951.1\|1994190_1994673_+	hypothetical protein	F1C5F0	Cronobacter_phage	5.7e-60	66.9
WP_164565696.1\|1994669_1995137_+	DUF1833 family protein	F1C5F1	Cronobacter_phage	1.2e-38	51.7
WP_164565168.1\|1995136_1995529_+	peptidoglycan endopeptidase	F1C5F2	Cronobacter_phage	2.5e-42	56.1
WP_164565169.1\|1995515_1997993_+	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	1.3e-232	48.6
WP_164565170.1\|1998053_2000258_+	hypothetical protein	A0A2I7SAN2	Vibrio_phage	4.0e-100	45.1
WP_164565171.1\|2000314_2001484_-\|integrase	tyrosine-type recombinase/integrase	E5AGD0	Erwinia_phage	3.4e-143	63.3
2001595:2001662	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2160231 : 2178928

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164565202.1\|2160231_2160954_+	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	5.0e-52	42.0
WP_071585886.1\|2161154_2161229_+	DUF4113 domain-containing protein	NA	NA	NA	NA
WP_164565203.1\|2161494_2162226_-	hypothetical protein	NA	NA	NA	NA
WP_164565204.1\|2162229_2163408_-	recombinase	A0A2H4J1K3	uncultured_Caudovirales_phage	1.8e-30	30.0
WP_164565205.1\|2163409_2163625_-	hypothetical protein	NA	NA	NA	NA
WP_164565206.1\|2163654_2164452_-	DNA adenine methylase	Q5QF26	Pseudomonas_virus	2.0e-65	48.1
WP_164565207.1\|2164438_2164645_-	hypothetical protein	NA	NA	NA	NA
WP_164565208.1\|2164654_2165371_-	hypothetical protein	A0A1W6JP41	Morganella_phage	8.8e-57	62.8
WP_164565209.1\|2165423_2166251_-	YfdQ family protein	A0A192Y6E5	Salmonella_phage	2.6e-84	55.4
WP_164565210.1\|2166369_2166684_-	hypothetical protein	A0A192Y6G0	Salmonella_phage	7.0e-35	66.3
WP_164565698.1\|2166876_2167065_-	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	4.5e-13	62.7
WP_164564166.1\|2167380_2167626_-	hypothetical protein	NA	NA	NA	NA
WP_123382609.1\|2168008_2168680_-	helix-turn-helix domain-containing protein	K7PLZ5	Enterobacterial_phage	1.1e-61	56.2
WP_102140689.1\|2168752_2168947_+	hypothetical protein	K7PHB1	Enterobacterial_phage	3.8e-15	64.9
WP_109913327.1\|2168984_2169440_+	hypothetical protein	K7PJS5	Enterobacterial_phage	3.1e-39	56.7
WP_164565211.1\|2169501_2169669_+	hypothetical protein	NA	NA	NA	NA
WP_164565212.1\|2169665_2170793_+	replication protein 15	K7PLZ7	Enterobacterial_phage	4.3e-50	58.2
WP_164565699.1\|2170792_2171038_+	hypothetical protein	NA	NA	NA	NA
WP_164565213.1\|2171037_2171571_+	phage N-6-adenine-methyltransferase	Q4A1M4	Enterobacteria_phage	5.5e-64	64.7
WP_164565214.1\|2171567_2171915_+	hypothetical protein	NA	NA	NA	NA
WP_164565215.1\|2171911_2172091_+	hypothetical protein	NA	NA	NA	NA
WP_164565216.1\|2172087_2172471_+	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	3.0e-27	49.2
WP_164565217.1\|2172486_2173155_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	9.4e-53	54.5
WP_164565218.1\|2173147_2173690_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	7.6e-45	67.8
WP_164565219.1\|2173720_2174377_+	hypothetical protein	A0A1W6JP37	Morganella_phage	2.5e-42	44.4
WP_164565220.1\|2174560_2174764_+	TrmB family transcriptional regulator	Q9MC00	Enterobacteria_phage	2.8e-08	57.7
WP_164565221.1\|2174896_2175940_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	1.4e-143	71.1
WP_164565222.1\|2176087_2178016_+	NACHT domain-containing protein	NA	NA	NA	NA
WP_006658152.1\|2178177_2178378_+	hypothetical protein	A0A1W6JNY9	Morganella_phage	1.4e-17	73.7
WP_164565223.1\|2178358_2178928_+	lysozyme	A0A1R3Y5W5	Salmonella_virus	6.3e-50	60.9

DBSCAN-SWA_5

2182200 : 2196776

Morganella_phage(33.33%)

tail,head,protease,portal,terminase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_109913118.1\|2182200_2182548_+	HNH endonuclease	A0A1W6JP27	Morganella_phage	6.5e-50	77.6
WP_164561055.1\|2182903_2183422_+	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	4.1e-56	62.3
WP_109913116.1\|2183443_2183938_+\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	6.9e-69	76.2
WP_164565224.1\|2183934_2185665_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	1.9e-291	83.4
WP_004911622.1\|2185661_2185823_+	hypothetical protein	A0A1W6JP78	Morganella_phage	2.4e-15	71.7
WP_004911621.1\|2185812_2187045_+\|portal	phage portal protein	A0A1W6JP33	Morganella_phage	4.5e-210	87.1
WP_140170610.1\|2187034_2187640_+\|head,protease	HK97 family phage prohead protease	A0A1W6JP53	Morganella_phage	1.4e-87	78.7
WP_164565700.1\|2187655_2188876_+\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	1.1e-189	83.5
WP_164561052.1\|2188968_2189271_+\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	1.5e-34	69.0
WP_164565225.1\|2189279_2189606_+\|head	phage head closure protein	Q7Y406	Yersinia_phage	9.9e-16	45.9
WP_164565226.1\|2189592_2189982_+	hypothetical protein	Q6UAX2	Klebsiella_phage	2.3e-27	44.4
WP_109913109.1\|2189978_2190383_+	hypothetical protein	Q7Y404	Yersinia_phage	5.9e-34	59.5
WP_140170607.1\|2190409_2190874_+\|tail	phage tail protein	Q7Y403	Yersinia_phage	1.1e-60	76.2
WP_140170606.1\|2190873_2191221_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.5e-17	44.6
WP_164565227.1\|2191451_2194805_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	9.5e-170	42.7
WP_164565228.1\|2194807_2195401_+	hypothetical protein	A0A0E3GML3	Enterobacteria_phage	2.9e-45	48.7
WP_164565229.1\|2195400_2195982_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	4.5e-51	50.0
WP_109913102.1\|2196019_2196307_+	hypothetical protein	NA	NA	NA	NA
WP_109913128.1\|2196377_2196776_+	hypothetical protein	A0A2H4IYI8	uncultured_Caudovirales_phage	4.4e-34	50.0

DBSCAN-SWA_6

3553957 : 3564538

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004257076.1\|3553957_3555169_+	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	1.7e-105	49.3
WP_004257083.1\|3555319_3555583_+	YbeD family protein	NA	NA	NA	NA
WP_036957959.1\|3555798_3556428_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_004257088.1\|3556551_3557517_+	lipoyl synthase	NA	NA	NA	NA
WP_004257099.1\|3557660_3557870_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	3.5e-22	78.1
WP_004257101.1\|3558086_3558545_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A2K9L300	Tupanvirus	7.1e-20	46.7
WP_036957963.1\|3558833_3559061_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	3.6e-17	56.2
WP_004257105.1\|3559069_3559483_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	1.4e-11	33.9
WP_004257107.1\|3559494_3561627_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-205	51.2
WP_004257109.1\|3561639_3562611_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.5e-133	71.9
WP_004257111.1\|3563338_3564538_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	2.6e-29	38.5

DBSCAN-SWA_7

3783630 : 3828021

Enterobacteria_phage(33.33%)

integrase,tail,lysis,protease,portal,terminase

attL 3783560:3783575|attR 3831903:3831918

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3783560:3783575	attL	NA	NA	NA	NA
WP_004257995.1\|3783630_3784425_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	6.2e-11	28.0
WP_164565484.1\|3784436_3785228_+	aspartate dehydrogenase	NA	NA	NA	NA
WP_004258002.1\|3785241_3786711_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_140170641.1\|3787034_3788243_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A291AWU1	Escherichia_phage	1.4e-107	47.6
WP_140170640.1\|3788211_3788427_-	hypothetical protein	NA	NA	NA	NA
WP_164565485.1\|3788463_3789036_-	3'-5' exoribonuclease	A0A1W6JP74	Morganella_phage	4.4e-51	55.1
WP_164565486.1\|3789226_3789595_-	hypothetical protein	NA	NA	NA	NA
WP_048606409.1\|3789605_3789785_-	hypothetical protein	NA	NA	NA	NA
WP_112308307.1\|3790184_3790544_-	hypothetical protein	Q7Y3W6	Yersinia_phage	5.4e-15	48.1
WP_112308308.1\|3790545_3791001_-	hypothetical protein	A0A248SL53	Klebsiella_phage	2.7e-27	38.0
WP_141240686.1\|3791010_3791214_-	hypothetical protein	A0A1U9ZAG7	Proteus_phage	1.2e-06	48.1
WP_094962331.1\|3791227_3792004_-	hypothetical protein	A0A248SL66	Klebsiella_phage	1.8e-39	39.5
WP_094962332.1\|3792087_3792402_-	hypothetical protein	A0A1W6JP69	Morganella_phage	1.4e-22	53.4
WP_094962333.1\|3792388_3792991_-	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	3.3e-41	46.7
WP_071548870.1\|3793141_3793330_-	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	9.1e-14	70.6
WP_141240664.1\|3793437_3793656_+	hypothetical protein	NA	NA	NA	NA
WP_164565487.1\|3793633_3794176_-	hypothetical protein	NA	NA	NA	NA
WP_094962334.1\|3794203_3794413_-	hypothetical protein	NA	NA	NA	NA
WP_096865216.1\|3794568_3795453_+	NAD-dependent DNA ligase	NA	NA	NA	NA
WP_164565719.1\|3795438_3796128_-	helix-turn-helix transcriptional regulator	A0A0N7C1P9	Escherichia_phage	2.6e-42	41.2
WP_096865218.1\|3796248_3796485_+	cytoplasmic chaperone TorD	NA	NA	NA	NA
WP_164565488.1\|3796561_3797020_+	hypothetical protein	A0A1W6JP72	Morganella_phage	1.1e-49	64.7
WP_164528691.1\|3797302_3797482_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_164528692.1\|3797491_3798553_+	replication protein	A0A248SL49	Klebsiella_phage	2.9e-32	49.3
WP_164565489.1\|3798552_3798798_+	hypothetical protein	NA	NA	NA	NA
WP_164565490.1\|3798797_3799331_+	phage N-6-adenine-methyltransferase	G8EYI1	Enterobacteria_phage	5.5e-64	65.3
WP_164565214.1\|3799327_3799675_+	hypothetical protein	NA	NA	NA	NA
WP_164565215.1\|3799671_3799851_+	hypothetical protein	NA	NA	NA	NA
WP_164565216.1\|3799847_3800231_+	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	3.0e-27	49.2
WP_164565491.1\|3800246_3800915_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	4.2e-53	54.5
WP_164565492.1\|3800907_3801450_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	8.1e-39	59.1
WP_164565493.1\|3801472_3802138_+	hypothetical protein	NA	NA	NA	NA
WP_164565494.1\|3802321_3802522_+	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	2.7e-08	60.8
WP_164565495.1\|3802654_3803713_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	1.4e-143	71.6
WP_164565496.1\|3803766_3804117_+	hypothetical protein	NA	NA	NA	NA
WP_164564168.1\|3804226_3804622_+	hypothetical protein	NA	NA	NA	NA
WP_164565497.1\|3804618_3804846_-	hypothetical protein	NA	NA	NA	NA
WP_164528703.1\|3804998_3805412_+	hypothetical protein	NA	NA	NA	NA
WP_110591879.1\|3805411_3805780_+	hypothetical protein	NA	NA	NA	NA
WP_164565498.1\|3805776_3806259_+	TIGR02594 family protein	A0A1U9ZAE8	Proteus_phage	4.2e-63	73.1
WP_164565720.1\|3806284_3806731_+\|lysis	lysis protein	I6PDF9	Cronobacter_phage	3.7e-13	35.2
WP_164565499.1\|3806742_3806904_+	hypothetical protein	NA	NA	NA	NA
WP_164564169.1\|3806934_3807135_+	hypothetical protein	NA	NA	NA	NA
WP_164565500.1\|3807269_3807773_+	DUF1441 family protein	A5LH26	Enterobacteria_phage	1.8e-40	54.9
WP_164565501.1\|3807769_3809881_+\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	1.8e-283	65.5
WP_164565502.1\|3809877_3810093_+	hypothetical protein	K7PMB5	Enterobacterial_phage	8.0e-14	56.5
WP_164565503.1\|3810089_3811595_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	2.4e-189	66.0
WP_164565721.1\|3811632_3813603_+\|protease	Clp protease ClpP	K7PGT6	Enterobacteria_phage	3.2e-234	63.1
WP_164565504.1\|3813687_3814035_+	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	7.3e-17	45.4
WP_164565505.1\|3814038_3814335_+	ATP-binding protein	NA	NA	NA	NA
WP_094963142.1\|3814318_3814876_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.1e-33	46.8
WP_164528403.1\|3814875_3815274_+\|tail	phage tail protein	K7PJT1	Enterobacteria_phage	3.9e-30	44.7
WP_164565506.1\|3815285_3815798_+\|tail	phage tail protein	O64327	Escherichia_phage	7.4e-58	65.6
WP_110591865.1\|3815993_3816524_+	Rha family transcriptional regulator	Q38450	Enterobacteria_phage	1.8e-51	57.6
WP_164565507.1\|3816567_3816945_+\|tail	phage minor tail protein G	NA	NA	NA	NA
WP_164565508.1\|3816968_3817283_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	4.4e-13	46.9
WP_164565509.1\|3817257_3820323_+\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	3.0e-122	35.2
WP_094963150.1\|3820372_3820702_+\|tail	phage tail protein	A0A1B5FPI1	Escherichia_phage	6.3e-10	46.5
WP_164565510.1\|3820770_3821349_+	zinc ribbon domain-containing protein	I6PDJ9	Cronobacter_phage	3.7e-21	47.4
WP_164565511.1\|3821406_3822105_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.1e-69	54.7
WP_164565512.1\|3822113_3822842_+\|tail	phage tail protein	S5MQI8	Escherichia_phage	4.7e-82	58.8
WP_125892296.1\|3822745_3823408_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.7e-51	48.1
WP_164565513.1\|3823410_3828021_+	DUF1983 domain-containing protein	A0A0K2FI38	Escherichia_phage	3.9e-267	53.0
3831903:3831918	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_AP022376

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022376_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022376_1

10457-10590

Orphan

Consensus_repeat	Method
TGGCTGTTATCTGATATGGTTAATCTAGACACTTGACAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022376_1

>merge|NZ_AP022376|1|10457-10590|CRISPRCasFinder
TGGCTGTTATCTGATATGGTTAATCTAGACACTTGACACGACCAATGATCTAAATAAACAGTTTTCCTTTTTAGTATGAAAACCCACCCAAAAGTTGGCTGTTATCTGATATGGTTAATTTAGACACTTGACAC

>NZ_AP022376|1|1|10457-10590|CRISPRCasFinder
TGGCTGTTATCTGATATGGTTAATCTAGACACTTGACAC	GACCAATGATCTAAATAAACAGTTTTCCTTTTTAGTATGAAAACCCACCCAAAAGT
TGGCTGTTATCTGATATGGTTAATTTAGACACTTGACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022376.1\|WP_000993245.1\|8110_8323_+\|DUF3330-domain-containing-protein	unknown	unknown	gnl\|CDD\|288642
NZ_AP022376.1\|WP_001446012.1\|8028_8148_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022376.1\|WP_001163403.1\|17930_18713_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_AP022376.1\|WP_164565733.1\|10686_11436_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376986
NZ_AP022376.1\|WP_003830719.1\|20907_21240_-\|quaternary-ammonium-compound-efflux-SMR-transporter-QacG2	unknown	unknown	gnl\|CDD\|224987
NZ_AP022376.1\|WP_000287615.1\|14750_16295_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_AP022376.1\|WP_114261019.1\|13839_14700_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|377533
NZ_AP022376.1\|WP_001067855.1\|12644_13349_+\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_AP022376.1\|WP_048609183.1\|9897_10089_+\|DUF5397-family-protein	unknown	unknown	gnl\|CDD\|340090
NZ_AP022376.1\|WP_000679427.1\|20349_20697_-\|quaternary-ammonium-compound-efflux-SMR-transporter-QacE-delta-1	unknown	unknown	gnl\|CDD\|279265
NZ_AP022376.1\|WP_164565732.1\|9272_9437_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_AP022376.1\|WP_000522996.1\|5279_5705_+\|organomercurial-transporter-MerC	unknown	unknown	gnl\|CDD\|237490
NZ_AP022376.1\|WP_001087807.1\|7808_8045_+\|broad-spectrum-mercury-transporter-MerE	unknown	unknown	gnl\|CDD\|184297
NZ_AP022376.1\|WP_001277466.1\|7446_7812_+\|mercury-resistance-co-regulator-MerD	unknown	unknown	gnl\|CDD\|184299
NZ_AP022376.1\|WP_040154008.1\|5743_7429_+\|mercury(II)-reductase	unknown	unknown	gnl\|CDD\|184298
NZ_AP022376.1\|WP_000259031.1\|19516_20356_-\|sulfonamide-resistant-dihydropteroate-synthase-Sul1	unknown	unknown	gnl\|CDD\|184303
NZ_AP022376.1\|WP_001067855.1\|8521_9226_-\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_AP022376.1\|WP_096865196.1\|10091_10373_+\|virulence-factor	unknown	unknown	gnl\|CDD\|225846
NZ_AP022376.1\|WP_001324342.1\|16417_17941_+\|IS21-like-element-IS1326-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_AP022376.1\|WP_000376623.1\|18888_19389_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_AP022376.1\|WP_000993245.1\|8110_8323_+\|DUF3330-domain-containing-protein	gnl\|CDD\|288642	pfam11809, DUF3330, Domain of unknown function (DUF3330). This family of proteins are functionally uncharacterized. This family is only found in bacteria.	6.39794e-25
NZ_AP022376.1\|WP_001324342.1\|16417_17941_+\|IS21-like-element-IS1326-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.13388e-20
NZ_AP022376.1\|WP_001163403.1\|17930_18713_+\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	2.31032e-66
NZ_AP022376.1\|WP_164565733.1\|10686_11436_+\|hypothetical-protein	gnl\|CDD\|376986	pfam03090, Replicase, Replicase family. This is a family of bacterial plasmid DNA replication initiator proteins. pfam01051 is a similar family. These RepA proteins exist as monomers and dimers in equilibrium: monomers bind directly to repeated DNA sequences and thus activate replication; dimers repress repA transcription by binding an inversely repeated DNA operator. Dimer dissociation can occur spontaneously or be mediated by Hsp70 chaperones.	1.4925e-45
NZ_AP022376.1\|WP_003830719.1\|20907_21240_-\|quaternary-ammonium-compound-efflux-SMR-transporter-QacG2	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	1.22301e-29
NZ_AP022376.1\|WP_000287615.1\|14750_16295_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.23585e-44
NZ_AP022376.1\|WP_114261019.1\|13839_14700_+\|AAA-family-ATPase	gnl\|CDD\|377533	pfam05621, TniB, Bacterial TniB protein. This family consists of several bacterial TniB NTP-binding proteins. TniB is a probable ATP-binding protein which is involved in Tn5053 mercury resistance transposition.	3.65877e-101
NZ_AP022376.1\|WP_001067855.1\|12644_13349_+\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.30323e-69
NZ_AP022376.1\|WP_048609183.1\|9897_10089_+\|DUF5397-family-protein	gnl\|CDD\|340090	pfam17375, DUF5397, Family of unknown function (DUF5397). This is a family of unknown function found in Proteobacteria.	9.96213e-24
NZ_AP022376.1\|WP_164565732.1\|9272_9437_-\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	2.65994e-12
NZ_AP022376.1\|WP_000522996.1\|5279_5705_+\|organomercurial-transporter-MerC	gnl\|CDD\|237490	PRK13755, PRK13755, organomercurial transporter MerC.	3.33011e-83
NZ_AP022376.1\|WP_001087807.1\|7808_8045_+\|broad-spectrum-mercury-transporter-MerE	gnl\|CDD\|184297	PRK13747, PRK13747, putative mercury resistance protein; Provisional.	2.67797e-48
NZ_AP022376.1\|WP_001277466.1\|7446_7812_+\|mercury-resistance-co-regulator-MerD	gnl\|CDD\|184299	PRK13749, PRK13749, HTH-type transcriptional regulator MerD.	1.11617e-67
NZ_AP022376.1\|WP_040154008.1\|5743_7429_+\|mercury(II)-reductase	gnl\|CDD\|184298	PRK13748, PRK13748, putative mercuric reductase; Provisional.	0
NZ_AP022376.1\|WP_000259031.1\|19516_20356_-\|sulfonamide-resistant-dihydropteroate-synthase-Sul1	gnl\|CDD\|184303	PRK13753, PRK13753, dihydropteroate synthase; Provisional.	0
NZ_AP022376.1\|WP_001067855.1\|8521_9226_-\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.30323e-69
NZ_AP022376.1\|WP_096865196.1\|10091_10373_+\|virulence-factor	gnl\|CDD\|225846	COG3309, VapD, Uncharacterized virulence-associated protein D [Function unknown].	1.20237e-30
NZ_AP022376.1\|WP_000679427.1\|20349_20697_-\|quaternary-ammonium-compound-efflux-SMR-transporter-QacE-delta-1	gnl\|CDD\|279265	pfam00893, Multi_Drug_Res, Small Multidrug Resistance protein. This family is the Small Multidrug Resistance (SMR) family. Several members have been shown to export a range of toxins, including ethidium bromide and quaternary ammonium compounds, through coupling with proton influx.	4.88768e-29
NZ_AP022376.1\|WP_000376623.1\|18888_19389_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.40463e-13

>NZ_AP022376.1|WP_096865196.1|10091_10373_+|virulence-factor
MYAISFDLVVAETSANHPKGVSQAYIDIATTLGNFGFQRVQGSLYTNHNEDMANLFNAMTALKAMSWFPKSVRDIRAFRIEQWSDFTKTIKTP
>NZ_AP022376.1|WP_048609183.1|9897_10089_+|DUF5397-family-protein
MMTINKIPTGAIKTFGNYGVLYQVGEKDSDLPDGDILVNITLLESGEKEKYKLSQLIEDPEAK
>NZ_AP022376.1|WP_164565732.1|9272_9437_-|ParA-family-protein
MIISCIGQKGGGAKSTIARTLAVGFTEAGWKTHLADIDEKQQTSLKWCKRHCCK
>NZ_AP022376.1|WP_001067855.1|8521_9226_-|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>NZ_AP022376.1|WP_000993245.1|8110_8323_+|DUF3330-domain-containing-protein
MNANAPNTASCTTCCVCCKEIPLDAAFTPEGAEYVEHFCGLDCYERFQARAKAATESDIAPVPGGSQPSD
>NZ_AP022376.1|WP_001446012.1|8028_8148_-|hypothetical-protein
MVQLAVFGAFAFMVVLLQIGSEAQSCPLSAGWEAVMIFP
>NZ_AP022376.1|WP_001087807.1|7808_8045_+|broad-spectrum-mercury-transporter-MerE
MNSPEHLPSETHKPITGYLWGALAVLTCPCHLPILAIVLAGTTAGAFIGEHWGIAALTLTGLFVLSVTRLLRAFKGRS
>NZ_AP022376.1|WP_001277466.1|7446_7812_+|mercury-resistance-co-regulator-MerD
MSAYTVSRLALDAGVSVHIVRDYLLRGLLRPVAYTTGGYGLFDDTALQRLRFVRAAFEAGIGLDALARLCRALDAADGDGASAQLAVLRQLVERRREALASLEMQLAAMPTEPAQHAESLP
>NZ_AP022376.1|WP_040154008.1|5743_7429_+|mercury(II)-reductase
MTTLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIEAGTSSDALTTAVAGLGYEATLADAPPTDNRAGLLDKMRGWIGAADKPSGNERPLQVVVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGMPPTPPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVLHGEARFKDDQSLIVSLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTALARNTLFFREDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTGYGEIRADQLLVATGRTPNTRSLALEAAGVAVNAQGAIVIDKGMRTSSPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRLLTLDNVPRALANFDTRGFIKLVIEEGSGRLIGVQAVAPEAGELIQTAVLAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFSKDVKQLSCCAG
>NZ_AP022376.1|WP_000522996.1|5279_5705_+|organomercurial-transporter-MerC
MGLITRIAGKTGALGSVVSAMGCAACFPAIASFGAAIGLGFLSQYEGLFIGILLPMFAGIALLANAIAWLNHRQWRRTALGTIGPILVLAAVFLMRAYGWQSGGLLYVGLALMVGVSVWDFISPAHRRCGPDSCELPEQRG
>NZ_AP022376.1|WP_164565733.1|10686_11436_+|hypothetical-protein
MYNDNQETIISQLPNKPYCSDNLDYGLKIRPKNKALDMLYLQINNPSIQTCLLFDIDRDNSFYDFEEAHLPVPHFTTQNPENGRCHMGYILKRGVCKTQNAKLEPLRYAAAVELEMGKSLKADQGFAGLITKNPFNPHWRPHWSNADLYELDYLADFITLENTNKETTKYESFGLGRNVNLFDDLRHYAYKNVLKFKDVSDFHHWMNEIEKQAINLNTYSNPTNLLPFRGRLRKRKIKHAKPVAEAVAA
>NZ_AP022376.1|WP_001067855.1|12644_13349_+|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>NZ_AP022376.1|WP_114261019.1|13839_14700_+|AAA-family-ATPase
MDEYPIIDLSHLLPAAQGLARLPADERIQRLRADRWIGYPRAVEALNRLEALYAWPNKQRMPNLLLVGPTNNGKSMIVEKFRRTHPASSDADQEHIPVLVVQMPSEPSVIRFYVALLAAMGAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAGNSVNRREFLNLLRFLGNELRIPLVGVGTRDAYLAIRSDDQLENRFEPMMLPVWEANDDCCSLLASFAASLPLRRPSPIATLDMARYLLTRSEGTIGELAHLLMAAAIVAVDSGEEAINHRTLSMAC
>NZ_AP022376.1|WP_000287615.1|14750_16295_-|IS3-family-transposase
MYSYEDRLRAVRLYLKLGRRMSATLRQLGYPTKNSLKAWLAEFERNQDLRRGYQRIKRQYTDEQKQRAVDHYIEQGYCLSHTIRSLGYPSREALRAWIRDLRPEFARTVVGSSAPTVARSRLEKQQAVIALNLRVGSAKDVADTVGVSRPTLYNWQHRLLGKVPLKPMTKKKGDTSLEQRHEALLRELAELESQNQRLRMENAILEKASELIKKDMGINPLELTSREKTKVVDALRVTFPLANLLCGLKLARSTYFYQRLRQTRPDKYTQVREVIRTIFEDNYRCYGYRRIDSALRLGGMRVSEKVVRRLMAQERLVVRTPRRRRFSAYAGDPTPAVPNLLNRDFHASAPNTKWLTDLTEIHIPAGKVYVSPIVDCFDGLVVAWNIGTSPDANLVNTMLDHAVRTLRPGEHPVIHSDRGSHYRWPAWIRRTENAQLTRSMSKKGCSPDNAACEGFFGRLKTELIYPRNWQHVTLKDLMTRIDAYIHWYNERRIKVSLGGRSPIEYRHAVGLMSV
>NZ_AP022376.1|WP_001324342.1|16417_17941_+|IS21-like-element-IS1326-family-transposase
MINVAILSAIRRWHFRDGASIREIARRSGLSRNTVRKYLQSKVVEPQYPARDSVGKLSPFEPKLRQWLSTEHKKTKKLRRNLRSMYRDLVALGFTGSYDRVCAFARQWKDSEQFKAQTSGKGCFIPLRFACGEAFQFDWSEDFARIAGKQVKLQIAQFKLAHSRAFVLRAYYQQKHEMLFDAHWHAFQIFGGIPKRGIYDNMKTAVDSVGRGKERRVNQRFTAMVSHYLFDAQFCNPASGWEKGQIEKNVQDSRQRLWQGAPDFQSLADLNVWLEHRCKALWSELRHPELDQTVQEAFADEQGELMALPNAFDAFVEQTKRVTSTCLVHHEGNRYSVPASYANRAISLRIYADKLVMAAEGQHIAEHPRLFGSGHARRGHTQYDWHHYLSVLQKKPGALRNGAPFAELPPAFKKLQSILLQRPGGDRDMVEILALVLHHDEGAVLSAVELALECGKPSKEHVLNLLGRLTEEPPPKPIPIPKGLRLTLEPQANVNRYDSLRRAHDAA
>NZ_AP022376.1|WP_001163403.1|17930_18713_+|ATP-binding-protein
MQHEGHVRILKSLKLFGMAHAIEELGNQNSPAFNQALPMLDSLIKAEVAEREVRSVNYQLRVAKFPVYRDLVGFDFSQSLVNEATVKQLHRCDFMEQAQNVVLIGGPGTGKTHLATAIGTQAVMHLNRRVRFFSTVDLVNALEQEKSSGRQGQIANRLLYADLVILDELGYLPFSQTGGALLFHLLSKLYEKTSVILTTNLSFSEWSRVFGDEKMTTALLDRLTHHCHILETGNESYRFKHSSTQNKQEEKQTRKLKIET
>NZ_AP022376.1|WP_000376623.1|18888_19389_-|GNAT-family-N-acetyltransferase
MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAARTQGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI
>NZ_AP022376.1|WP_000259031.1|19516_20356_-|sulfonamide-resistant-dihydropteroate-synthase-Sul1
MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
>NZ_AP022376.1|WP_000679427.1|20349_20697_-|quaternary-ammonium-compound-efflux-SMR-transporter-QacE-delta-1
MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
>NZ_AP022376.1|WP_003830719.1|20907_21240_-|quaternary-ammonium-compound-efflux-SMR-transporter-QacG2
MKNWLFLATAIIFEVIATSALKSSEGFTRLVPSFIVVAGYAAAFYFLSLTLKSIPVGIAYAVWSGLGIVLVTAIAWVLHGQKLDMWGFVGVGFIISGVAVLNLLSKASVH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP022376_1	1.1\|10496\|56\|NZ_AP022376\|CRISPRCasFinder	10496-10551	56	NZ_AP022376	Providencia rettgeri strain BML2531 plasmid pBML2531, complete sequence	10496-10551	0	1.0
NZ_AP022376_1	1.1\|10496\|56\|NZ_AP022376\|CRISPRCasFinder	10496-10551	56	NZ_CP012903	Providencia rettgeri strain N15-01091 plasmid pNDM15-1091, complete sequence	11591-11646	0	1.0

1. spacer 1.1|10496|56|NZ_AP022376|CRISPRCasFinder matches to NZ_AP022376 (Providencia rettgeri strain BML2531 plasmid pBML2531, complete sequence) position: , mismatch: 0, identity: 1.0

gaccaatgatctaaataaacagttttcctttttagtatgaaaacccacccaaaagt	CRISPR spacer
gaccaatgatctaaataaacagttttcctttttagtatgaaaacccacccaaaagt	Protospacer
********************************************************

2. spacer 1.1|10496|56|NZ_AP022376|CRISPRCasFinder matches to NZ_CP012903 (Providencia rettgeri strain N15-01091 plasmid pNDM15-1091, complete sequence) position: , mismatch: 0, identity: 1.0

gaccaatgatctaaataaacagttttcctttttagtatgaaaacccacccaaaagt	CRISPR spacer
gaccaatgatctaaataaacagttttcctttttagtatgaaaacccacccaaaagt	Protospacer
********************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8521 : 55062

Escherichia_phage(27.78%)

integrase,transposase

attL 8470:8529|attR 54306:55125

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
8470:8529	attL	NA	NA	NA	NA
WP_001067855.1\|8521_9226_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_164565732.1\|9272_9437_-	ParA family protein	A0A219YAQ5	Aeromonas_phage	5.5e-07	51.0
WP_048609183.1\|9897_10089_+	DUF5397 family protein	NA	NA	NA	NA
WP_096865196.1\|10091_10373_+	virulence factor	NA	NA	NA	NA
WP_164565733.1\|10686_11436_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|12644_13349_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_114261019.1\|13839_14700_+	AAA family ATPase	NA	NA	NA	NA
WP_000287615.1\|14750_16295_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.0e-38	34.6
WP_001324342.1\|16417_17941_+\|transposase	IS21-like element IS1326 family transposase	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
WP_001163403.1\|17930_18713_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.5e-33	35.0
WP_000376623.1\|18888_19389_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|19516_20356_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|20349_20697_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_003830719.1\|20907_21240_-	quaternary ammonium compound efflux SMR transporter QacG2	NA	NA	NA	NA
WP_013263788.1\|21464_21923_-	aminoglycoside N-acetyltransferase AAC(6')-Il	NA	NA	NA	NA
WP_001007673.1\|21960_22788_-	oxacillin-hydrolyzing class D beta-lactamase OXA-2	NA	NA	NA	NA
WP_063860573.1\|22940_23678_-	subclass B1 metallo-beta-lactamase IMP-11	NA	NA	NA	NA
WP_014714131.1\|23742_24147_-	fosfomycin resistance thiol transferase FosI	NA	NA	NA	NA
WP_002075255.1\|24292_25306_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
WP_001162012.1\|25611_26169_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_001138073.1\|26171_29144_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
WP_011039612.1\|29300_29738_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.5e-30	56.0
WP_011039613.1\|29725_30763_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	5.8e-94	54.5
WP_109910753.1\|31016_31292_+	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA
WP_000842086.1\|31322_32432_+	S-(hydroxymethyl)glutathione dehydrogenase	E3SJ82	Synechococcus_phage	3.7e-30	28.1
WP_006814898.1\|32473_32872_+	VOC family protein	NA	NA	NA	NA
WP_109910772.1\|32937_33774_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_000470623.1\|33801_34437_-	recombinase family protein	NA	NA	NA	NA
WP_011039616.1\|34604_37592_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	5.5e-294	53.5
WP_011039617.1\|37788_38673_+	DNA replication terminus site-binding protein	NA	NA	NA	NA
WP_011039618.1\|38685_39009_+	hypothetical protein	NA	NA	NA	NA
WP_011039619.1\|39028_39907_+	MFS transporter	NA	NA	NA	NA
WP_011039620.1\|39926_40475_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	8.6e-12	30.7
WP_109910752.1\|40517_41662_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	2.7e-47	37.5
WP_039855103.1\|41853_42447_+	fimbrial protein	NA	NA	NA	NA
WP_006814879.1\|42518_43220_+	molecular chaperone	NA	NA	NA	NA
WP_164565734.1\|43229_45713_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_164565735.1\|45703_46711_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_039855100.1\|46724_47342_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_164565736.1\|47539_47848_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_164565737.1\|49494_50847_-\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	1.1e-116	48.1
WP_082981382.1\|51299_51608_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_082981383.1\|51622_52171_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_109910748.1\|52387_52597_+	hypothetical protein	NA	NA	NA	NA
WP_082981384.1\|52673_52988_+	hypothetical protein	NA	NA	NA	NA
WP_109910747.1\|53261_53480_+	hypothetical protein	NA	NA	NA	NA
WP_109912806.1\|53513_54038_+	DNA-binding protein	NA	NA	NA	NA
WP_164565738.1\|54030_54324_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|54357_55062_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
54306:55125	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP022373

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_AP022376

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection