CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	1 crisprs	DEDDh	3	1
NZ_CP048308	Escherichia coli strain 9 plasmid p009_D, complete sequence	0 crisprs	NA	0	0
NZ_CP048304	Escherichia coli strain 9 chromosome, complete genome	4 crisprs	cas3,c2c9_V-U4,csa3,DEDDh,DinG,cas14j	3	7
NZ_CP048305	Escherichia coli strain 9 plasmid p009_A, complete sequence	0 crisprs	DEDDh	0	1
NZ_CP048309	Escherichia coli strain 9 plasmid p009_E, complete sequence	0 crisprs	NA	0	0
NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048306_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048306_1

1373-1627

Orphan

Consensus_repeat	Method
GTATGCTGTCAGCGGT	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP048306_1

>merge|NZ_CP048306|1|1373-1627|PILER-CR
GTATGCTGTCAGCGGTGTTTTATTGAGGAATTTTTGTTTGGATATGCTATCAGCGGTAATTAATGGCATATGTCAGACCTTCGTATGCTGCCAGCGGTAATTTTGTTCTGGTTATACCCATACCGGTACACATTATTCATGCAATGTCTTAAGTATGCTGTCAGCGGTAAAAAATCGAGTAAAGTATGCTGTGAGCGGTGAGATAGACTCTCGATATGCTATCAGCGGCAGTTGATTGTGTATGCTGTCAGCGGT

>NZ_CP048306|1|1|1373-1627|PILER-CR
GTATGCTGTCAGCGGT	GTTTTATTGAGGAATTTTTGTTTGGATATGCTATCAGCGGTAATTAATGGCATATGTCAGACCTTC
GTATGCTGCCAGCGGT	AATTTTGTTCTGGTTATACCCATACCGGTACACATTATTCATGCAATGTCTTAA
GTATGCTGTCAGCGGT	AAAAAATCGAGTAAAGTATGCTGTGAGCGGTGAGATAGACTCTCGATATGCTATCAGCGGCAGTTGATTGT
GTATGCTGTCAGCGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048306.1\|WP_000644408.1\|1886_2222_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048306.1\|WP_052904267.1\|4453_5278_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375832
NZ_CP048306.1\|WP_059244869.1\|1674_1887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048306.1\|WP_001265407.1\|2437_2713_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048306.1\|WP_059277878.1\|3667_4408_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048306.1\|WP_048959223.1\|6207_6408_-\|membrane-protein	unknown	unknown	gnl\|CDD\|179379
NZ_CP048306.1\|WP_162655276.1\|6500_7529_-\|recombinase	unknown	unknown	gnl\|CDD\|223544
NZ_CP048306.1\|WP_000715581.1\|5373_6204_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366488
NZ_CP048306.1\|WP_053904505.1\|3257_3647_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048306.1\|WP_059277879.1\|2768_3194_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|177336

>NZ_CP048306.1|WP_059244869.1|1674_1887_-|hypothetical-protein
MALTLAGLEIEKTSGYWRAKGFKQPGVLERLEREDGYIVHQRREWRMYDPETGKLTTKAGTLWGLLKKIH
>NZ_CP048306.1|WP_000644408.1|1886_2222_-|hypothetical-protein
MKAIPFALLFLSSIVVADTTVYQCEMSVADVKNGALTDVIKAPYGAMVVDSGDQFYVVRDDRVLSSPYLTNRNGKLTGVGEDHFVYNKYKGFYGVHASQQSYLFDDCKEVG
>NZ_CP048306.1|WP_001265407.1|2437_2713_-|hypothetical-protein
MRVLVRIVTSTVYDVFPLFMVKADGLNDEETDALIQRILVEYTGHDADSVMVDDDGVCWHNGNCWYVEETQQISDEDAAHLERILSISTFE
>NZ_CP048306.1|WP_059277879.1|2768_3194_-|hypothetical-protein
MAAIKKLYDAANAALDVIDDEVSKGFPEPDWAHQLRNAIAEMNPPNPTTDETDWQRFIRMYAQEIGPTPTAEQAMLLKYFKEAGEDLPIDDSAYWFHCAWRKYDVIFTQGMGSKDMVVWHLLHIDTAVDRVIEQFFPKQED
>NZ_CP048306.1|WP_053904505.1|3257_3647_-|hypothetical-protein
MLLIQPGFGLKIKKGHMFGFKESKRKILSIRLPFITIHWLNRESTDYWYKCALAAFNDPDWFIENHHAVRQAKRKANTTYMKAYRKAWKEHRDRYQKDMEKLELENMDLRRKLGEARRDIEAYKRLVSE
>NZ_CP048306.1|WP_059277878.1|3667_4408_-|hypothetical-protein
MKRKIEEPKTTLNKHGEKIQTHPAFGLVKTSRVNTTGIRLFDSELEHRDYIEIGVYEAELSLDNERTRPQRSSNRRPLVEIRLSQAQWAAMVSSFGVGEGVPCTISYKTIGDSIRVHDIAEQKSIRQKFNDQIKAATNSEIDRLNQQVSELGELVKKGRAGKRDLEELYRKLASAVANLPENLCFATELMQEQMDEIVSSGKAEIEAYVAGTVMRKGLAALGTESCINDDPTVSITKMESGKELLP
>NZ_CP048306.1|WP_052904267.1|4453_5278_-|hypothetical-protein
MPNHITNEIRVIGGTNKQRLDFIRAITNKKGLIDFNTICRRPKSIEMEENNHIRRMASAMAGETVYDYMFGELKTPEQVELAMRESGMTRKEIRKIKEQALMRLENYRRYGYYSWFDWSRANWGTKWNAYNIEMPVKRIPTRIKYGHNFRHTHVRAYAKRIYKKRLARHAATGGELVIRFETAWSMPKPIYQAMARKFPHLEFVIRYADEDFGNNCGFILLRNGKWEYDYIAPANNEQSSEEKIKWRKFAFELCCPGITPQEYGLNEEYEYAGY
>NZ_CP048306.1|WP_000715581.1|5373_6204_-|hypothetical-protein
MKKGLLAVALAAICTMGLTGCDRVEPGYVGIKVNKLGEDKGIGEVVGVGRQWTGLNTELYVFPTFKQMKTYDEPFTFQMSDGTAIGHKIGVAYLVNRDKVTTVFQTYRKGVDDITESDLRQKIADSLNRLASRMTTDSFIDGGKAQLLDNALKDIQKEMSPVGIEVLSLSWVGKPDYPKTVIESINAKVTANQRTLQRQQEVEQRKAEANMLREQANGEADAIRARAQAEADAIRLRGEALRQNPNVMELEAINKWNGQLPQYMTQGANTPFITVK
>NZ_CP048306.1|WP_048959223.1|6207_6408_-|membrane-protein
MIKIYLLAVATGLSVALIYGLLVPSLISAKSDLAVMLGVLVGFGTPVIGLIAGRKFINSLIKAKGK
>NZ_CP048306.1|WP_162655276.1|6500_7529_-|recombinase
MGSNDEIQKVTHWIDTGFPPLNKAISGRYDGGFPCGRIVEVFGPPSAGKTFLATAAMISAQKQDGLAVFLDHENSFDVGLAVANGLNADEDDGQWVYKQPDTFEDSVELIGTILKLVRDEELIPESAPICIVADSLASMVPNSKAEKFEKMAEGTAKDKDQLNMNDNTALARATSANFPTLSLWARKYNACIIFLNQVRTKIGVMFGDPTTSPGGDSPKFYASVRIRLGASVMKDGKEKIGQDVGAECIKNKVAPPYGKCTWKFYFDPTRGLDVIESLVEYMLDEGYLPKNASGRVEIGDKKYTKSQIVEMYREKPLAEIIAALQAIDDRRSKDNPTESVEE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_KY515225	Escherichia coli strain 244 plasmid AnCo2, complete sequence	18820-18873	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP050499	Escherichia coli strain RM13322 plasmid pRM13322, complete sequence	69808-69861	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_AP017612	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence	1691-1744	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	CP022461	Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence	21467-21520	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP024271	Escherichia coli strain F8111-1SC3 plasmid unnamed2	75091-75144	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	1471-1524	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	MK125034	Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence	1691-1744	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	MK125035	Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence	1691-1744	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP027358	Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence	53856-53909	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	18343-18396	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	CP053753	Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence	75450-75503	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NC_018651	Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence	62156-62209	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP024264	Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1	36034-36087	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP010153	Escherichia coli strain D9 plasmid A, complete genome	71601-71654	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP027369	Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence	83050-83103	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP010144	Escherichia coli strain D4 plasmid A, complete genome	71679-71732	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	83835-83888	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP019002	Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence	94582-94635	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	CP045933	Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence	1471-1524	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP041451	Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence	1471-1524	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP034165	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence	37107-37160	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP022085	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence	96917-96970	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP014490	Escherichia coli strain G749 plasmid pG749_2, complete sequence	85747-85800	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NC_023916	Escherichia coli H89 plasmid pECOH89, complete sequence	1691-1744	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_LR213459	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2	1471-1524	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_KY515224	Escherichia coli strain 243 plasmid AnCo1, complete sequence	106949-107002	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	MF554642	uncultured bacterium clone AA-105 plasmid pTIC, complete sequence	31093-31146	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	CP054387	Escherichia phage CMS-2020a, complete genome	1471-1524	0	1.0
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	64261-64314	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	86946-86999	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	28914-28967	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	633-686	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	70427-70480	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP045191	Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence	1471-1524	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP041426	Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence	82641-82694	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	137199-137252	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	1471-1524	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP015915	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence	75929-75982	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP012114	Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence	63380-63433	1	0.981
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	2682-2735	2	0.963
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP045278	Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence	1471-1524	2	0.963
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	7833-7886	2	0.963
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	CP025888	Escherichia coli strain 503046 plasmid p503046_111, complete sequence	1472-1525	2	0.963
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	104450-104503	2	0.963
NZ_CP048306_1	1.2\|1471\|54\|NZ_CP048306\|PILER-CR	1471-1524	54	CP053388	Escherichia phage CMS-2020a, complete sequence	1471-1524	2	0.963
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	1389-1454	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	70345-70410	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP019002	Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence	94500-94565	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP041451	Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence	1389-1454	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	MF554642	uncultured bacterium clone AA-105 plasmid pTIC, complete sequence	31011-31076	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_AP017612	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence	1609-1674	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	CP022461	Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence	21385-21450	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NC_018651	Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence	62074-62139	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	CP045933	Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence	1389-1454	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP022085	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence	96835-96900	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_LR213459	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2	1389-1454	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	CP054387	Escherichia phage CMS-2020a, complete genome	1389-1454	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP050499	Escherichia coli strain RM13322 plasmid pRM13322, complete sequence	69878-69943	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	CP053753	Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence	75520-75585	6	0.909
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	86864-86929	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	28832-28897	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	551-616	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP045191	Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence	1389-1454	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP041426	Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence	82559-82624	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	MK125034	Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence	1609-1674	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	MK125035	Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence	1609-1674	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP027358	Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence	53774-53839	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP010153	Escherichia coli strain D9 plasmid A, complete genome	71519-71584	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	1389-1454	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP027369	Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence	82968-83033	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP010144	Escherichia coli strain D4 plasmid A, complete genome	71597-71662	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	83753-83818	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP014490	Escherichia coli strain G749 plasmid pG749_2, complete sequence	85665-85730	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NC_023916	Escherichia coli H89 plasmid pECOH89, complete sequence	1609-1674	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	64331-64396	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_KY515225	Escherichia coli strain 244 plasmid AnCo2, complete sequence	18890-18955	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP024271	Escherichia coli strain F8111-1SC3 plasmid unnamed2	75161-75226	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	18413-18478	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP024264	Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1	36104-36169	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	137269-137334	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP015915	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence	75999-76064	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP034165	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence	37177-37242	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_KY515224	Escherichia coli strain 243 plasmid AnCo1, complete sequence	107019-107084	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP045278	Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence	1389-1454	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	CP025888	Escherichia coli strain 503046 plasmid p503046_111, complete sequence	1390-1455	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	CP053388	Escherichia phage CMS-2020a, complete sequence	1389-1454	7	0.894
NZ_CP048306_1	1.1\|1389\|66\|NZ_CP048306\|PILER-CR	1389-1454	66	NZ_CP012114	Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence	63450-63515	8	0.879
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	87016-87086	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	28984-29054	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	703-773	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	1541-1611	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	70497-70567	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP041451	Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence	1541-1611	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	MF554642	uncultured bacterium clone AA-105 plasmid pTIC, complete sequence	31163-31233	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	64174-64244	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	137112-137182	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	2752-2822	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	CP022461	Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence	21537-21607	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP045191	Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence	1541-1611	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP045278	Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence	1541-1611	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP041426	Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence	82711-82781	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP027358	Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence	53926-53996	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NC_018651	Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence	62226-62296	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP010153	Escherichia coli strain D9 plasmid A, complete genome	71671-71741	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	CP025888	Escherichia coli strain 503046 plasmid p503046_111, complete sequence	1542-1612	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	1541-1611	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP027369	Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence	83120-83190	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP010144	Escherichia coli strain D4 plasmid A, complete genome	71749-71819	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP019002	Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence	94652-94722	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	CP045933	Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence	1541-1611	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP022085	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence	96987-97057	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_LR213459	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2	1541-1611	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	CP054387	Escherichia phage CMS-2020a, complete genome	1541-1611	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	CP053388	Escherichia phage CMS-2020a, complete sequence	1541-1611	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP050499	Escherichia coli strain RM13322 plasmid pRM13322, complete sequence	69721-69791	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	18256-18326	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	7746-7816	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	CP053753	Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence	75363-75433	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP015915	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence	75842-75912	11	0.845
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP012114	Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence	63294-63364	12	0.831
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_AP017612	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence	1761-1831	12	0.831
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	83906-83976	12	0.831
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP024271	Escherichia coli strain F8111-1SC3 plasmid unnamed2	75004-75074	12	0.831
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP024264	Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1	35947-36017	12	0.831
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	104363-104433	12	0.831
NZ_CP048306_1	1.3\|1541\|71\|NZ_CP048306\|PILER-CR	1541-1611	71	NZ_CP034165	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence	37020-37090	12	0.831

1. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_KY515225 (Escherichia coli strain 244 plasmid AnCo2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

2. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP050499 (Escherichia coli strain RM13322 plasmid pRM13322, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

3. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

4. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to CP022461 (Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

5. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP024271 (Escherichia coli strain F8111-1SC3 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

6. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

7. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to MK125034 (Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

8. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to MK125035 (Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

9. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP027358 (Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

10. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

11. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to CP053753 (Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

12. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

13. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP024264 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

14. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP010153 (Escherichia coli strain D9 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

15. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

16. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP010144 (Escherichia coli strain D4 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

17. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

18. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

19. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to CP045933 (Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

20. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

21. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

22. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

23. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP014490 (Escherichia coli strain G749 plasmid pG749_2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

24. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NC_023916 (Escherichia coli H89 plasmid pECOH89, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

25. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_LR213459 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

26. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_KY515224 (Escherichia coli strain 243 plasmid AnCo1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

27. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to MF554642 (uncultured bacterium clone AA-105 plasmid pTIC, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

28. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

29. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

30. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

31. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

32. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

33. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttataccaataccggtacacattattcatgcaatgtcttaa	Protospacer
******************** *********************************

34. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

35. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

36. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

37. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

38. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

39. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgccttaa	Protospacer
************************************************.*****

40. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

41. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

42. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

43. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

44. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

45. spacer 1.2|1471|54|NZ_CP048306|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

46. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

47. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

48. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

49. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

50. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to MF554642 (uncultured bacterium clone AA-105 plasmid pTIC, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

51. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

52. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to CP022461 (Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

53. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

54. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to CP045933 (Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

55. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

56. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_LR213459 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

57. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

58. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP050499 (Escherichia coli strain RM13322 plasmid pRM13322, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

59. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to CP053753 (Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

60. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

61. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

62. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

63. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

64. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

65. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to MK125034 (Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

66. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to MK125035 (Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

67. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP027358 (Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

68. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP010153 (Escherichia coli strain D9 plasmid A, complete genome) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

69. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

70. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

71. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP010144 (Escherichia coli strain D4 plasmid A, complete genome) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

72. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

73. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP014490 (Escherichia coli strain G749 plasmid pG749_2, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

74. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NC_023916 (Escherichia coli H89 plasmid pECOH89, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

75. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

76. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_KY515225 (Escherichia coli strain 244 plasmid AnCo2, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

77. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP024271 (Escherichia coli strain F8111-1SC3 plasmid unnamed2) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

78. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

79. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP024264 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

80. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

81. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

82. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

83. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_KY515224 (Escherichia coli strain 243 plasmid AnCo1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

84. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

85. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

86. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

87. spacer 1.1|1389|66|NZ_CP048306|PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 8, identity: 0.879

-gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtca	CRISPR spacer
tgttttattgaggaa-ttttgtttggatatgctatcagcggtaattaatggcatatgtca	Protospacer
 ************** ********************************************

88. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

89. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

90. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

91. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

92. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

93. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

94. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to MF554642 (uncultured bacterium clone AA-105 plasmid pTIC, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

95. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

96. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

97. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

98. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to CP022461 (Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

99. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

100. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

101. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

102. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP027358 (Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

103. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

104. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP010153 (Escherichia coli strain D9 plasmid A, complete genome) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

105. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

106. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

107. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

108. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP010144 (Escherichia coli strain D4 plasmid A, complete genome) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

109. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

110. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to CP045933 (Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

111. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

112. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_LR213459 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

113. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

114. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

115. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP050499 (Escherichia coli strain RM13322 plasmid pRM13322, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

116. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

117. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

118. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to CP053753 (Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

119. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

120. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
taaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
 ***********************************************************

121. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

122. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

123. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP024271 (Escherichia coli strain F8111-1SC3 plasmid unnamed2) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgatatagactctcgatatgctatcagcgg	Protospacer
********************************* **************************

124. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP024264 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

125. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaagaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
***.********************************************************

126. spacer 1.3|1541|71|NZ_CP048306|PILER-CR matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 109861

123

Salmonella_phage(83.93%)

tail,tRNA,portal,terminase,integrase

attL 1455:1474|attR 110061:110080

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1455:1474	attL	NA	NA	NA	NA
WP_059244869.1\|1674_1887_-	hypothetical protein	J9Q7S8	Salmonella_phage	2.6e-33	95.7
WP_000644408.1\|1886_2222_-	hypothetical protein	J9Q7Z5	Salmonella_phage	6.6e-39	73.9
WP_001265407.1\|2437_2713_-	hypothetical protein	J9Q738	Salmonella_phage	4.0e-34	75.8
WP_059277879.1\|2768_3194_-	hypothetical protein	J9Q7G9	Salmonella_phage	1.0e-60	76.1
WP_053904505.1\|3257_3647_-	hypothetical protein	K7PJK0	Enterobacteria_phage	1.1e-58	85.7
WP_059277878.1\|3667_4408_-	hypothetical protein	G4KK93	Yersinia_phage	7.5e-27	32.2
WP_052904267.1\|4453_5278_-	hypothetical protein	A0A0U4IID7	Pseudomonas_phage	5.4e-18	25.3
WP_000715581.1\|5373_6204_-	hypothetical protein	J9Q7Z4	Salmonella_phage	3.1e-122	94.9
WP_048959223.1\|6207_6408_-	membrane protein	J9Q6J0	Salmonella_phage	1.9e-09	60.6
WP_162655276.1\|6500_7529_-	recombinase	J9Q736	Salmonella_phage	9.0e-188	93.9
WP_053900130.1\|7576_7843_-	hypothetical protein	J9Q7G8	Salmonella_phage	4.7e-32	79.5
WP_053900129.1\|7842_8787_-	exonuclease	J9Q7S6	Salmonella_phage	3.5e-162	88.5
WP_059277874.1\|8847_9870_-	hypothetical protein	J9Q7Z3	Salmonella_phage	1.0e-138	83.8
WP_048959212.1\|9987_10419_-	hypothetical protein	J9Q6I8	Salmonella_phage	2.6e-64	86.0
WP_162655270.1\|10544_14063_-	DNA polymerase III subunit alpha	J9Q7Z2	Salmonella_phage	0.0e+00	94.4
WP_048959206.1\|14243_15479_-	AAA domain-containing protein	J9Q733	Salmonella_phage	8.8e-198	81.0
WP_162655271.1\|15574_17683_-	cobalamin biosynthesis protein CobT	J9Q7G6	Salmonella_phage	8.2e-228	66.3
WP_029305696.1\|17781_17994_-	hypothetical protein	NA	NA	NA	NA
WP_001282577.1\|18245_18632_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_048959201.1\|18626_19730_-\|integrase	site-specific integrase	A0A1P8DTG6	Proteus_phage	1.3e-27	33.8
WP_000156433.1\|19941_20187_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	4.5e-13	44.9
WP_101917689.1\|20361_21624_+	hypothetical protein	NA	NA	NA	NA
WP_059277870.1\|23610_23901_-	hypothetical protein	J9Q7S1	Salmonella_phage	2.6e-36	78.1
WP_012640723.1\|24046_24262_-	hypothetical protein	J9Q6I3	Salmonella_phage	2.2e-19	72.1
WP_016607331.1\|24245_24425_-	hypothetical protein	J9Q729	Salmonella_phage	8.4e-17	70.7
WP_000733193.1\|24421_25744_-	DNA ligase	J9Q7G5	Salmonella_phage	5.3e-241	91.4
WP_021533203.1\|25740_25998_-	hypothetical protein	J9Q7R9	Salmonella_phage	1.9e-14	57.8
WP_059277869.1\|26279_27056_-	hypothetical protein	J9Q7Z0	Salmonella_phage	1.4e-52	41.1
WP_021533205.1\|27131_28247_-	hypothetical protein	J9Q720	Salmonella_phage	6.5e-208	93.2
WP_049076695.1\|28394_29735_-	AAA family ATPase	J9Q7G4	Salmonella_phage	2.6e-235	93.5
WP_001717320.1\|29778_30519_-	hypothetical protein	J9Q7R8	Salmonella_phage	2.2e-127	89.6
WP_072249143.1\|30699_31110_-	hypothetical protein	J9Q6F2	Salmonella_phage	3.3e-24	44.1
WP_059277867.1\|31102_31843_-	hypothetical protein	J9Q719	Salmonella_phage	1.8e-17	46.2
WP_160378290.1\|31876_32230_-	hypothetical protein	J9Q7G3	Salmonella_phage	1.4e-44	97.9
WP_059277866.1\|32235_32904_-	AAA family ATPase	J9Q7R7	Salmonella_phage	2.6e-111	92.3
WP_059277865.1\|33080_33833_-	hypothetical protein	J9Q7Y8	Salmonella_phage	8.4e-18	30.3
WP_000931258.1\|33817_34201_-	hypothetical protein	A0A077SLR3	Escherichia_phage	8.4e-14	47.1
WP_032203358.1\|34529_34781_-	hypothetical protein	J9Q7R6	Salmonella_phage	2.5e-27	79.5
WP_059277864.1\|34782_35475_-	hypothetical protein	J9Q7Y7	Salmonella_phage	1.8e-123	93.9
WP_001717323.1\|35488_35812_-	hypothetical protein	J9Q6E7	Salmonella_phage	5.9e-45	89.7
WP_032328862.1\|36134_36743_-	hypothetical protein	J9Q7G0	Salmonella_phage	4.5e-78	73.8
WP_048959172.1\|36742_36997_-	hypothetical protein	J9Q7R5	Salmonella_phage	7.9e-29	69.0
WP_077791784.1\|37087_39253_-\|tail	tail fiber protein	U5N099	Enterobacteria_phage	4.8e-66	52.6
WP_059277730.1\|40707_45432_-	DUF1983 domain-containing protein	J9Q713	Salmonella_phage	0.0e+00	74.8
WP_059277731.1\|45449_46043_-\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	3.7e-101	91.9
WP_000526939.1\|46030_46828_-\|tail	tail protein	J9Q7R4	Salmonella_phage	1.3e-154	93.6
WP_000511445.1\|46820_47519_-\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	1.5e-133	96.6
WP_053900116.1\|47601_47937_-\|tail	phage tail protein	J9Q6E1	Salmonella_phage	1.8e-52	86.4
WP_101917700.1\|47979_52545_-	tape measure protein	J9Q712	Salmonella_phage	0.0e+00	82.3
WP_000952686.1\|52552_52777_-	hypothetical protein	J9Q7F7	Salmonella_phage	8.8e-32	94.6
WP_059277733.1\|52902_53220_-	hypothetical protein	J9Q7R3	Salmonella_phage	1.1e-48	95.2
WP_059277734.1\|53275_54022_-	Ig domain-containing protein	J9Q7Y4	Salmonella_phage	4.0e-121	91.9
WP_059277735.1\|54096_54480_-	hypothetical protein	J9Q6D8	Salmonella_phage	8.0e-57	81.9
WP_000523628.1\|54481_54955_-	hypothetical protein	J9Q711	Salmonella_phage	3.3e-76	90.4
WP_059277736.1\|54945_55290_-	hypothetical protein	J9Q7F6	Salmonella_phage	1.1e-54	94.7
WP_000057118.1\|55369_56203_-	hypothetical protein	J9Q7R2	Salmonella_phage	1.3e-141	92.1
WP_000801187.1\|56202_56637_-	hypothetical protein	J9Q7Y3	Salmonella_phage	1.1e-59	82.6
WP_059277737.1\|56681_57602_-	Ig domain-containing protein	J9Q6D6	Salmonella_phage	1.4e-131	83.6
WP_053904528.1\|57675_58551_-	hypothetical protein	J9Q710	Salmonella_phage	5.0e-155	94.5
WP_001055285.1\|58576_59464_-	hypothetical protein	J9Q7F4	Salmonella_phage	7.1e-133	89.3
WP_001717193.1\|59485_61060_-\|portal	phage portal protein	J9Q7R1	Salmonella_phage	2.2e-286	93.1
WP_001007299.1\|61086_62343_-\|terminase	terminase	J9Q7Y2	Salmonella_phage	7.5e-245	96.4
WP_059277738.1\|62342_62975_-	hypothetical protein	J9Q6D4	Salmonella_phage	4.8e-91	84.3
WP_000176292.1\|63171_63438_-	hypothetical protein	J9Q757	Salmonella_phage	1.4e-36	88.6
WP_000129633.1\|63447_64338_-	hypothetical protein	J9Q7I6	Salmonella_phage	2.6e-167	98.6
WP_059277739.1\|64334_65000_-	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	2.4e-109	98.1
WP_000161986.1\|64996_65665_-	ParB N-terminal domain-containing protein	J9Q6L1	Salmonella_phage	5.6e-106	89.6
WP_000382660.1\|65664_66345_-	ParB N-terminal domain-containing protein	J9Q756	Salmonella_phage	2.7e-108	88.1
WP_059277740.1\|66427_67987_+	DEAD/DEAH box helicase	J9Q7I4	Salmonella_phage	1.1e-277	92.5
WP_001291061.1\|67989_68268_+	hypothetical protein	J9Q7T9	Salmonella_phage	4.6e-22	58.2
WP_059277741.1\|68300_68900_+	hypothetical protein	NA	NA	NA	NA
WP_053886743.1\|69045_69534_+	hypothetical protein	NA	NA	NA	NA
WP_053886744.1\|69549_70149_+	hypothetical protein	NA	NA	NA	NA
WP_049076843.1\|70145_70670_+	transcriptional regulator	J9Q6L0	Salmonella_phage	1.2e-66	79.7
WP_029305755.1\|70965_71616_+	hypothetical protein	J9Q754	Salmonella_phage	1.1e-98	84.7
WP_000255469.1\|71665_71869_+	hypothetical protein	J9Q7I3	Salmonella_phage	5.9e-27	91.0
WP_059277742.1\|71889_72117_+	hypothetical protein	A0A1S6KV93	Providencia_phage	2.5e-05	41.3
WP_059277743.1\|72734_73217_-	hypothetical protein	J9Q805	Salmonella_phage	1.2e-57	66.0
WP_059277744.1\|73422_74121_-	hypothetical protein	NA	NA	NA	NA
WP_059277745.1\|74235_74631_-	hypothetical protein	J9Q7I1	Salmonella_phage	1.6e-31	53.8
WP_000749407.1\|74757_75069_-	hypothetical protein	J9Q7T7	Salmonella_phage	5.7e-29	63.1
WP_162655272.1\|75223_75553_-	hypothetical protein	NA	NA	NA	NA
WP_001405018.1\|77126_77348_-	hypothetical protein	J9Q750	Salmonella_phage	8.7e-16	52.2
WP_072249128.1\|77609_78305_-	HD domain-containing protein	J9Q7H7	Salmonella_phage	2.7e-79	67.6
WP_001755492.1\|78457_80491_-\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	2.2e-44	24.1
WP_000004356.1\|80648_81749_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_000506720.1\|81786_82176_-	DNA repair protein	A0A077SK24	Escherichia_phage	8.6e-67	93.0
WP_032203392.1\|82348_82873_-	toprim domain-containing protein	A0A2D2W4T4	Escherichia_phage	3.8e-33	48.5
WP_072249129.1\|82886_83741_-	hypothetical protein	A0A0F6TJ66	Escherichia_coli_O157_typing_phage	1.5e-23	94.8
WP_059277747.1\|83737_83944_-	hypothetical protein	G8C7S3	Escherichia_phage	6.3e-08	48.5
WP_162655273.1\|83936_84545_-	DUF551 domain-containing protein	K7P7E4	Enterobacteria_phage	2.7e-51	96.8
WP_059277748.1\|84546_84969_-	hypothetical protein	A0A076GCP4	Escherichia_phage	1.1e-27	62.9
WP_021547926.1\|84968_85154_-	hypothetical protein	NA	NA	NA	NA
WP_059277749.1\|85150_85696_-	ead/Ea22-like family protein	A0A222YWM9	Escherichia_phage	2.7e-42	59.5
WP_032203388.1\|85692_86148_-	hypothetical protein	A0A222YY85	Escherichia_phage	1.3e-18	58.2
WP_059277750.1\|86147_86690_-	hypothetical protein	J9Q748	Salmonella_phage	2.5e-88	87.4
WP_059277751.1\|86686_87328_-	HD domain-containing protein	J9Q7H7	Salmonella_phage	8.3e-99	87.3
WP_059277752.1\|87447_87828_-	hypothetical protein	J9Q801	Salmonella_phage	2.7e-28	69.8
WP_059277753.1\|87827_88532_-	hypothetical protein	J9Q6K2	Salmonella_phage	1.6e-87	75.9
WP_162655274.1\|88593_90279_-	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	0.0e+00	92.0
WP_059277754.1\|90420_90987_-	hypothetical protein	J9Q7H6	Salmonella_phage	1.6e-58	65.2
WP_072249130.1\|91126_91285_-	DUF3927 family protein	NA	NA	NA	NA
WP_025670506.1\|91284_91710_-	tellurite resistance TerB family protein	Q71TK7	Escherichia_phage	3.4e-56	79.4
WP_014962274.1\|91803_91992_-	hypothetical protein	J9Q800	Salmonella_phage	9.4e-11	51.6
WP_072249131.1\|92001_92496_-	hypothetical protein	J9Q6J9	Salmonella_phage	4.5e-28	51.2
WP_162655275.1\|92644_93289_-	ribonuclease HI	J9Q745	Salmonella_phage	8.6e-96	78.9
WP_048959260.1\|93817_94048_-	hypothetical protein	J9Q7H5	Salmonella_phage	5.3e-32	86.8
WP_052904282.1\|94233_94827_-	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	3.8e-98	86.3
WP_059277756.1\|95009_95819_-	hypothetical protein	J9Q7Z9	Salmonella_phage	3.1e-66	53.6
WP_021520508.1\|95979_96537_-	3'-5' exonuclease	J9Q6J8	Salmonella_phage	3.3e-88	83.6
WP_001755506.1\|96546_96966_-	hypothetical protein	J9Q743	Salmonella_phage	2.1e-50	70.5
WP_000386470.1\|97027_97672_-	AAA family ATPase	J9Q7H4	Salmonella_phage	4.6e-97	81.8
WP_160378288.1\|97671_98142_-	dihydrofolate reductase	J9Q7T1	Salmonella_phage	2.8e-80	90.4
WP_021512290.1\|98144_98558_-	hypothetical protein	J9Q7Z8	Salmonella_phage	5.6e-64	86.9
WP_059277757.1\|98559_99663_-	thymidylate synthase	J9Q6J6	Salmonella_phage	1.7e-192	87.2
WP_021512292.1\|99834_100704_-	hypothetical protein	J9Q742	Salmonella_phage	2.4e-133	81.0
WP_000122502.1\|100781_101924_-	ribonucleotide-diphosphate reductase subunit beta	J9Q7H3	Salmonella_phage	2.6e-196	88.7
WP_059277758.1\|102029_104345_-	ribonucleoside-diphosphate reductase subunit alpha	J9Q7T0	Salmonella_phage	0.0e+00	84.2
WP_059277759.1\|104418_104988_-	hypothetical protein	J9Q7Z7	Salmonella_phage	9.6e-91	86.2
WP_059277760.1\|104997_105741_-	hypothetical protein	J9Q6J5	Salmonella_phage	8.8e-52	47.4
WP_137647971.1\|105730_107647_-	AAA family ATPase	J9Q741	Salmonella_phage	3.8e-248	73.2
WP_000174804.1\|107876_108962_-	exonuclease	J9Q7S9	Salmonella_phage	6.8e-186	87.3
WP_000364573.1\|109216_109861_-	hypothetical protein	J9Q739	Salmonella_phage	2.9e-107	86.3
110061:110080	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP048304

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048304_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048304_1

2047411-2047524

Orphan

Consensus_repeat	Method
TGCCGGATGCGCTTCGCTTATCCGGCCTACAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048304_1

>merge|NZ_CP048304|1|2047411-2047524|CRISPRCasFinder
TGCCGGATGCGCTTCGCTTATCCGGCCTACAAACCGCATCGTAGGCTGGGTAGGGCGTTCATGCCGCATCTGGGCATCCAGTGCCGGATGCGCTTCGCTTATCCGGCCTACAAA

>NZ_CP048304|1|1|2047411-2047524|CRISPRCasFinder
TGCCGGATGCGCTTCGCTTATCCGGCCTACAAA	CCGCATCGTAGGCTGGGTAGGGCGTTCATGCCGCATCTGGGCATCCAG
TGCCGGATGCGCTTCGCTTATCCGGCCTACAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048304.1\|WP_000786563.1\|2067436_2068621_-\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP048304.1\|WP_000992976.1\|2036355_2037159_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	unknown	unknown	gnl\|CDD\|182257
NZ_CP048304.1\|WP_000332036.1\|2046255_2047386_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP048304.1\|WP_000012318.1\|2058085_2059774_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP048304.1\|WP_001209933.1\|2039505_2040765_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP048304.1\|WP_000857226.1\|2040754_2042383_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP048304.1\|WP_000135040.1\|2046001_2046256_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP048304.1\|WP_016265893.1\|2050542_2054301_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_CP048304.1\|WP_001297934.1\|2059770_2060394_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP048304.1\|WP_000779093.1\|2044018_2045095_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP048304.1\|WP_000140607.1\|2037199_2038126_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP048304.1\|WP_000948732.1\|2042655_2044014_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP048304.1\|WP_001000377.1\|2038318_2039509_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP048304.1\|WP_000301034.1\|2045297_2045948_+\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP048304.1\|WP_001537808.1\|2060537_2064932_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP048304.1\|WP_001225880.1\|2066586_2067363_+\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP048304.1\|WP_001281253.1\|2055309_2057937_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP048304.1\|WP_001075170.1\|2047575_2049861_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP048304.1\|WP_001104503.1\|2064932_2066582_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP048304.1\|WP_000990760.1\|2054440_2055163_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350

Protein	Function_ID	Function_description	E-value
NZ_CP048304.1\|WP_000786563.1\|2067436_2068621_-\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP048304.1\|WP_000992976.1\|2036355_2037159_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	0
NZ_CP048304.1\|WP_000332036.1\|2046255_2047386_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP048304.1\|WP_000012318.1\|2058085_2059774_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP048304.1\|WP_001209933.1\|2039505_2040765_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP048304.1\|WP_000857226.1\|2040754_2042383_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP048304.1\|WP_000135040.1\|2046001_2046256_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_CP048304.1\|WP_016265893.1\|2050542_2054301_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP048304.1\|WP_001297934.1\|2059770_2060394_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	4.78627e-139
NZ_CP048304.1\|WP_000779093.1\|2044018_2045095_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP048304.1\|WP_000140607.1\|2037199_2038126_-\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP048304.1\|WP_000948732.1\|2042655_2044014_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP048304.1\|WP_001000377.1\|2038318_2039509_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP048304.1\|WP_000301034.1\|2045297_2045948_+\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.02722e-157
NZ_CP048304.1\|WP_001537808.1\|2060537_2064932_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP048304.1\|WP_001225880.1\|2066586_2067363_+\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	2.9978e-151
NZ_CP048304.1\|WP_001281253.1\|2055309_2057937_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP048304.1\|WP_001075170.1\|2047575_2049861_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP048304.1\|WP_001104503.1\|2064932_2066582_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	2.66557e-125
NZ_CP048304.1\|WP_000990760.1\|2054440_2055163_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	3.80247e-169

>NZ_CP048304.1|WP_000332036.1|2046255_2047386_-|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>NZ_CP048304.1|WP_000135040.1|2046001_2046256_-|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP048304.1|WP_000301034.1|2045297_2045948_+|lipopolysaccharide-kinase-InaA
MAVSAKHDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKVEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP048304.1|WP_000779093.1|2044018_2045095_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNVLEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP048304.1|WP_000948732.1|2042655_2044014_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP048304.1|WP_000857226.1|2040754_2042383_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGINAEAIEPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGEIQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEATLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP048304.1|WP_001209933.1|2039505_2040765_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYTLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLIIDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFVVLASGSFFSGGLVAERDGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDEALRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHVAQQIAQRAGGQQ
>NZ_CP048304.1|WP_001000377.1|2038318_2039509_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP048304.1|WP_000140607.1|2037199_2038126_-|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSEGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGEASPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH
>NZ_CP048304.1|WP_000992976.1|2036355_2037159_+|2-keto-3-deoxy-L-rhamnonate-aldolase
MNALLTNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRVKGSY
>NZ_CP048304.1|WP_001075170.1|2047575_2049861_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP048304.1|WP_016265893.1|2050542_2054301_+|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIISLRKEYLSLLPSMIASLFSANGAAAVIDSCQGYDIKANCQASRQSLSGNMQDWSIADGQWLIFSGMANNASGGAVFLQHSAEFTISPQNETGMTLFADNSVSGEYNNGGAIFAKENSTINLANVIFDSNVAGGYGGAIYSAGTNDTGAADLRVTNAVFHNNIANDGKGGAIYTINNDVYLSDDAFNNNQAYTSTSYSDGDGGAIDVTDNSTDNTHLSGKTIINNTSFTNNYAEGYGGAIYTSSTTSPYLIDISVDDNYDQNNGVMIDENNSASGYDHSATAAAGGFMYIGHSVAEFNIAADKTLVIGNTSNDGAIDSLAGTGVIVKEGAGELVLNADNNAFTGEMSIQNGEVTLGRSDELMNVGDTHCQSDPQDCFGLMVGSTVHSEYQAELNVGNTQQTFVHSLTGFANGILNIDAGGNVTVNQGGFSGSIQGEGQLTVAQDGSYLLTGAQSMALTGDIVVEDNAVLSLAGNQADLRAMQSDPQSIVLNGGVLDLSDFTTWDGDSSYNDGLQISGSGGTVIGSNDVVDISSGDDLHIGGSDASQNGVYVVINAGDQRVTLANNNGYLGNTQIASGTLEVSDNSQLGDTSYNRSVIFTDPQQHSEMDVTTDVDTRSATTGQGRNIEMRADGEIHVEDGVDTQWGGLMADSTGQQLDSVSTLTKSGGGTLELTASGTATSAVRVEDGTLKGEAENIIPYVSSLWVGEDGVFETGQNQDIRSIDATSGGDIDITDGTVLRLTQQDTNQALDASLFSGDGTLVNATDGVTLAGELNTNLETDSLTYLSDVTVNGNLTNTSGAISLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSASDQLVLNGNTAGNTAVVINPITGIGEPTSTGIKVVDFAADPAQFQNNAQFSLTGSGYVNMGAYDYTLVEDNNDWYLRSQEVNPTPPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYFNNLRAANQAFVMERRDHAGGDGQTLNLRVIGGRYHYTAVGQLAQHEDTSTVQLSGNLFSGHWGDDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGVDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVSVTPTLDLNYYHDPHATEIEEDGSTISDDAAKQRGEIKVGITGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP048304.1|WP_000990760.1|2054440_2055163_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHEEIAKFEAVASHWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVVQTSLKERHMTGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP048304.1|WP_001281253.1|2055309_2057937_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP048304.1|WP_000012318.1|2058085_2059774_+|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPKKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRWETRFGLEARTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGRCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMVDVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP048304.1|WP_001297934.1|2059770_2060394_+|DUF1175-domain-containing-protein
MRHGLLVLICWLYCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANEALKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYIIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP048304.1|WP_001537808.1|2060537_2064932_+|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGKQEPGLYLVEAIVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKTGSEILWTDGLGVMTRGVTDGSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRKQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDDNGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGELVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTSHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKSLYMKWSMPTVYRMGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALTLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGVRFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTSDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEYWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEIMLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAGKQQGQLLEKARNEMGELAYMLPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAPGSEWTGMQVK
>NZ_CP048304.1|WP_001104503.1|2064932_2066582_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLALRGAQHDQLYQLSSSGVTKVSALPDTLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIDVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWATGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVLVDLFARYPLKKVTEEKSTTAFKPGVLNGRYRVTFANGNHMTFVSHGETTLLTVKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRVTEGTLSWRHATAQAGQGERYDQILAFAYPDNNLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP048304.1|WP_001225880.1|2066586_2067363_+|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQTINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGAGAIRARLRLVLSWDTDNTDLDLHVVTPDGEYAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP048304.1|WP_000786563.1|2067436_2068621_-|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSTIDLGATVIKAAIERAKIDSLHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESSALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFEPEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: NZ_CP048304_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048304_2

2787029-2787152

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048304_2

>merge|NZ_CP048304|2|2787029-2787152|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP048304|2|2|2787029-2787152|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048304.1\|WP_000848173.1\|2784851_2786462_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP048304.1\|WP_000190987.1\|2794712_2795738_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP048304.1\|WP_000212649.1\|2786587_2786893_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP048304.1\|WP_001070013.1\|2783244_2784030_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP048304.1\|WP_000534254.1\|2787466_2788723_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP048304.1\|WP_000098896.1\|2791032_2792181_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP048304.1\|WP_001182336.1\|2792471_2793683_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP048304.1\|WP_000007283.1\|2797606_2798188_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP048304.1\|WP_000587573.1\|2784033_2784846_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP048304.1\|WP_001273524.1\|2779762_2781865_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP048304.1\|WP_001529207.1\|2782579_2783248_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP048304.1\|WP_000102278.1\|2796036_2796126_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP048304.1\|WP_000528342.1\|2778450_2778660_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP048304.1\|WP_000701056.1\|2796291_2797461_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP048304.1\|WP_001304331.1\|2776480_2777893_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_CP048304.1\|WP_162655238.1\|2793795_2794716_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP048304.1\|WP_001174963.1\|2788763_2790137_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP048304.1\|WP_001298530.1\|2781877_2782516_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP048304.1\|WP_001070247.1\|2779115_2779742_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP048304.1\|WP_000493948.1\|2790351_2790993_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846

Protein	Function_ID	Function_description	E-value
NZ_CP048304.1\|WP_000848173.1\|2784851_2786462_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP048304.1\|WP_000190987.1\|2794712_2795738_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP048304.1\|WP_000212649.1\|2786587_2786893_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.08543e-62
NZ_CP048304.1\|WP_001070013.1\|2783244_2784030_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	2.79351e-162
NZ_CP048304.1\|WP_000534254.1\|2787466_2788723_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP048304.1\|WP_000098896.1\|2791032_2792181_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP048304.1\|WP_001182336.1\|2792471_2793683_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP048304.1\|WP_000007283.1\|2797606_2798188_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_CP048304.1\|WP_000587573.1\|2784033_2784846_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	4.87964e-174
NZ_CP048304.1\|WP_001273524.1\|2779762_2781865_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP048304.1\|WP_001529207.1\|2782579_2783248_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	2.48101e-77
NZ_CP048304.1\|WP_000528342.1\|2778450_2778660_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_CP048304.1\|WP_000701056.1\|2796291_2797461_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.96796e-97
NZ_CP048304.1\|WP_001304331.1\|2776480_2777893_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP048304.1\|WP_162655238.1\|2793795_2794716_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP048304.1\|WP_001174963.1\|2788763_2790137_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP048304.1\|WP_001298530.1\|2781877_2782516_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	4.01521e-120
NZ_CP048304.1\|WP_001070247.1\|2779115_2779742_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	1.7427e-139
NZ_CP048304.1\|WP_000493948.1\|2790351_2790993_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	1.51027e-123

>NZ_CP048304.1|WP_000212649.1|2786587_2786893_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFSDEKSALTYLEKHTARLKNLGVEEVVAKVFDVNVSLSQFNQAKLA
>NZ_CP048304.1|WP_000848173.1|2784851_2786462_-|FAD-NAD(P)-binding-protein
MKTIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDDENSKLMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNLDLPSETFDLVVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVIFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKRENHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYATIPSESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFNQM
>NZ_CP048304.1|WP_000587573.1|2784033_2784846_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERAFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_CP048304.1|WP_001070013.1|2783244_2784030_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPQFWPVWLIIAGLLLVGMWLVLGLHALLRARGVKKSATDHGERIYLYSKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDMFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_CP048304.1|WP_001529207.1|2782579_2783248_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVIDNDNGTQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAETRLAKGFPPICVSACPEHALIFGHEDSPEIQAWLQENKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP048304.1|WP_001298530.1|2781877_2782516_+|YdhW-family-putative-oxidoreductase-system-protein
MNHQDELPLAEVSEIDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLENIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIATMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP048304.1|WP_001273524.1|2779762_2781865_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEDMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>NZ_CP048304.1|WP_001070247.1|2779115_2779742_+|ferredoxin-like-protein
MNPVDRPLLNIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP048304.1|WP_000528342.1|2778450_2778660_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP048304.1|WP_001304331.1|2776480_2777893_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQSFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP048304.1|WP_000534254.1|2787466_2788723_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCAQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKANDTLLAGGTMNNLGGEDSDTIVENGAIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITDAATQVHLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP048304.1|WP_001174963.1|2788763_2790137_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMQNIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRAAR
>NZ_CP048304.1|WP_000493948.1|2790351_2790993_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTQA
>NZ_CP048304.1|WP_000098896.1|2791032_2792181_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP048304.1|WP_001182336.1|2792471_2793683_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLFIGLTIFALGSLGMLWVENAATLLILRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_CP048304.1|WP_162655238.1|2793795_2794716_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYTFRDMGMLSWSCDHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP048304.1|WP_000190987.1|2794712_2795738_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPQSWIVQGDFEPESGYRAMQQILSQSHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP048304.1|WP_000102278.1|2796036_2796126_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP048304.1|WP_000701056.1|2796291_2797461_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFLSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPEAVCVANS
>NZ_CP048304.1|WP_000007283.1|2797606_2798188_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_CP048304_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048304_3

3463500-3463591

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048304_3

>merge|NZ_CP048304|3|3463500-3463591|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTTTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP048304|3|3|3463500-3463591|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTTTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048304.1\|WP_001063183.1\|3468748_3471295_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_CP048304.1\|WP_001151437.1\|3464014_3464611_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP048304.1\|WP_014639575.1\|3459033_3459726_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP048304.1\|WP_000024569.1\|3467592_3467898_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP048304.1\|WP_001304750.1\|3453014_3456977_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP048304.1\|WP_001230247.1\|3471294_3472467_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP048304.1\|WP_001528884.1\|3457942_3459034_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_CP048304.1\|WP_001126780.1\|3459737_3460124_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP048304.1\|WP_001044292.1\|3464896_3466138_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP048304.1\|WP_000420625.1\|3466672_3467593_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP048304.1\|WP_001264957.1\|3473261_3474290_-\|TMAO-reductase-system-periplasmic-protein-TorT	unknown	unknown	gnl\|CDD\|236801
NZ_CP048304.1\|WP_001304753.1\|3462057_3463386_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP048304.1\|WP_000191701.1\|3457016_3457655_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP048304.1\|WP_001028102.1\|3461542_3462037_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP048304.1\|WP_001120112.1\|3472596_3473289_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_CP048304.1\|WP_000979523.1\|3452750_3452960_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048304.1\|WP_001304752.1\|3460131_3460932_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP048304.1\|WP_000209904.1\|3468152_3468752_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP048304.1\|WP_001001177.1\|3460941_3461532_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP048304.1\|WP_001143120.1\|3464631_3464859_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285

Protein	Function_ID	Function_description	E-value
NZ_CP048304.1\|WP_001063183.1\|3468748_3471295_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_CP048304.1\|WP_001151437.1\|3464014_3464611_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_CP048304.1\|WP_014639575.1\|3459033_3459726_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	9.86533e-168
NZ_CP048304.1\|WP_000024569.1\|3467592_3467898_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	7.6018e-65
NZ_CP048304.1\|WP_001304750.1\|3453014_3456977_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP048304.1\|WP_001230247.1\|3471294_3472467_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP048304.1\|WP_001528884.1\|3457942_3459034_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP048304.1\|WP_001126780.1\|3459737_3460124_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_CP048304.1\|WP_001044292.1\|3464896_3466138_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP048304.1\|WP_000420625.1\|3466672_3467593_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP048304.1\|WP_001264957.1\|3473261_3474290_-\|TMAO-reductase-system-periplasmic-protein-TorT	gnl\|CDD\|236801	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional.	1.64507e-176
NZ_CP048304.1\|WP_001304753.1\|3462057_3463386_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP048304.1\|WP_000191701.1\|3457016_3457655_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.3356e-153
NZ_CP048304.1\|WP_001028102.1\|3461542_3462037_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	2.66791e-105
NZ_CP048304.1\|WP_001120112.1\|3472596_3473289_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	5.89892e-138
NZ_CP048304.1\|WP_001304752.1\|3460131_3460932_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	1.74712e-137
NZ_CP048304.1\|WP_000209904.1\|3468152_3468752_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	4.97721e-84
NZ_CP048304.1\|WP_001001177.1\|3460941_3461532_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	8.41995e-130
NZ_CP048304.1\|WP_001143120.1\|3464631_3464859_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44

>NZ_CP048304.1|WP_001304753.1|3462057_3463386_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSIFMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKNVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP
>NZ_CP048304.1|WP_001028102.1|3461542_3462037_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQESLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP048304.1|WP_001001177.1|3460941_3461532_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLREIYALMKWGPTSANCSPTRIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQYVDDAFFAGSTLKSNLLINIGYGDSSKLFARLPRLSFEEACGLL
>NZ_CP048304.1|WP_001304752.1|3460131_3460932_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLDQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVREQLLHSGGAQAWVEAQPLFLYPADWMAARAPRLEAEGALALAHFQGKNNLLRRLNALKRADFSRHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_CP048304.1|WP_001126780.1|3459737_3460124_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP048304.1|WP_014639575.1|3459033_3459726_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQTALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARTAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRNQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSSTSFARIA
>NZ_CP048304.1|WP_001528884.1|3457942_3459034_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGSGKSDFKGDFFTMDDCRVSPQPSVPMKVICAGQSDAGMAFSARYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVANVPGAEGVLLTFDDFLSGIETFGERIQPLMLCRAHLPALTQEVA
>NZ_CP048304.1|WP_000191701.1|3457016_3457655_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_CP048304.1|WP_001304750.1|3453014_3456977_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQSLPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRQVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAQVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQMLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP048304.1|WP_000979523.1|3452750_3452960_-|hypothetical-protein
MMLQLCATVLNVTCVASLKMNEMLINEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP048304.1|WP_001151437.1|3464014_3464611_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP048304.1|WP_001143120.1|3464631_3464859_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP048304.1|WP_001044292.1|3464896_3466138_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAATVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCDIHVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYKLLEQIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDRVLNEAVK
>NZ_CP048304.1|WP_000420625.1|3466672_3467593_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGTKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP048304.1|WP_000024569.1|3467592_3467898_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPSEIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_CP048304.1|WP_000209904.1|3468152_3468752_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNGLENSIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDGLRQKTLTALREWLPEFAARCRQYDRFGFYAALSQLLLVLVECDYQKR
>NZ_CP048304.1|WP_001063183.1|3468748_3471295_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGTSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFNDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFISPKDASARGIRHGDVVRVFNVRGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP048304.1|WP_001230247.1|3471294_3472467_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVATGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_CP048304.1|WP_001120112.1|3472596_3473289_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
>NZ_CP048304.1|WP_001264957.1|3473261_3474290_-|TMAO-reductase-system-periplasmic-protein-TorT
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVASLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQWSHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYYYQHTSAAKK

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Crispr_ID: NZ_CP048304_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048304_4

4852818-4852957

Orphan

Consensus_repeat	Method
TGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048304_4

>merge|NZ_CP048304|4|4852818-4852957|CRISPRCasFinder
TGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCAAGGCTGTTATTGTCGGATGCGACGTGAACGCCTTATCCGACCTACACA

>NZ_CP048304|4|4|4852818-4852957|CRISPRCasFinder
TGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACA	GCACTGAACTCGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCAAGGC
TGTTATTGTCGGATGCGACGTGAACGCCTTATCCGACCTACACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048304.1\|WP_000896740.1\|4842051_4842615_-\|gluconokinase	unknown	unknown	gnl\|CDD\|182097
NZ_CP048304.1\|WP_000635216.1\|4860091_4860544_-\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
NZ_CP048304.1\|WP_000428627.1\|4862452_4863385_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183466
NZ_CP048304.1\|WP_000584114.1\|4849922_4851023_-\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_CP048304.1\|WP_000416368.1\|4853501_4856357_+\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP048304.1\|WP_001128336.1\|4844715_4846035_+\|gnt-II-system-L-idonate-transporter	unknown	unknown	gnl\|CDD\|129873
NZ_CP048304.1\|WP_000397144.1\|4851289_4852801_+\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP048304.1\|WP_001298035.1\|4857783_4858287_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP048304.1\|WP_000998695.1\|4843886_4844651_+\|gluconate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|181225
NZ_CP048304.1\|WP_001197423.1\|4842831_4843863_+\|L-idonate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|182130
NZ_CP048304.1\|WP_000061766.1\|4841028_4842048_+\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_CP048304.1\|WP_001346533.1\|4861221_4862442_+\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
NZ_CP048304.1\|WP_000012936.1\|4859042_4860047_+\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP048304.1\|WP_001000681.1\|4856403_4857591_-\|DUF898-family-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP048304.1\|WP_033551236.1\|4847177_4848680_+\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP048304.1\|WP_001295681.1\|4848840_4849923_-\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP048304.1\|WP_001304655.1\|4846101_4847100_+\|DNA-binding-transcriptional-regulator-IdnR	unknown	unknown	gnl\|CDD\|380489
NZ_CP048304.1\|WP_000235828.1\|4863408_4864413_+\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
NZ_CP048304.1\|WP_000786399.1\|4853058_4853502_+\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP048304.1\|WP_000002950.1\|4858464_4858881_-\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876

Protein	Function_ID	Function_description	E-value
NZ_CP048304.1\|WP_000896740.1\|4842051_4842615_-\|gluconokinase	gnl\|CDD\|182097	PRK09825, idnK, gluconokinase.	2.59086e-125
NZ_CP048304.1\|WP_000635216.1\|4860091_4860544_-\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	4.82284e-65
NZ_CP048304.1\|WP_000428627.1\|4862452_4863385_+\|carbamate-kinase	gnl\|CDD\|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	0
NZ_CP048304.1\|WP_000584114.1\|4849922_4851023_-\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP048304.1\|WP_000416368.1\|4853501_4856357_+\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP048304.1\|WP_001128336.1\|4844715_4846035_+\|gnt-II-system-L-idonate-transporter	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP048304.1\|WP_000397144.1\|4851289_4852801_+\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP048304.1\|WP_001298035.1\|4857783_4858287_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.51706e-18
NZ_CP048304.1\|WP_000998695.1\|4843886_4844651_+\|gluconate-5-dehydrogenase	gnl\|CDD\|181225	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional.	0
NZ_CP048304.1\|WP_001197423.1\|4842831_4843863_+\|L-idonate-5-dehydrogenase	gnl\|CDD\|182130	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional.	0
NZ_CP048304.1\|WP_000061766.1\|4841028_4842048_+\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.74944e-168
NZ_CP048304.1\|WP_001346533.1\|4861221_4862442_+\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NZ_CP048304.1\|WP_000012936.1\|4859042_4860047_+\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP048304.1\|WP_001000681.1\|4856403_4857591_-\|DUF898-family-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	3.07847e-106
NZ_CP048304.1\|WP_033551236.1\|4847177_4848680_+\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP048304.1\|WP_001295681.1\|4848840_4849923_-\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP048304.1\|WP_001304655.1\|4846101_4847100_+\|DNA-binding-transcriptional-regulator-IdnR	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	1.9949e-108
NZ_CP048304.1\|WP_000235828.1\|4863408_4864413_+\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NZ_CP048304.1\|WP_000786399.1\|4853058_4853502_+\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
NZ_CP048304.1\|WP_000002950.1\|4858464_4858881_-\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	7.57352e-69

>NZ_CP048304.1|WP_000397144.1|4851289_4852801_+|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP048304.1|WP_000584114.1|4849922_4851023_-|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_CP048304.1|WP_001295681.1|4848840_4849923_-|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP048304.1|WP_033551236.1|4847177_4848680_+|DUF853-domain-containing-protein
MSKPLLIARTLDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAAEGTASEKLLARLKNIGVNDWQPHTNPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHLFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDMEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRPNPTFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLVNHSPVYGKYEDDVDRESAYEMLQKGFQASIEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>NZ_CP048304.1|WP_001304655.1|4846101_4847100_+|DNA-binding-transcriptional-regulator-IdnR
MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSVHNYQTLIANYNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLDKRVRRKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPDLDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRMAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL
>NZ_CP048304.1|WP_001128336.1|4844715_4846035_+|gnt-II-system-L-idonate-transporter
MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVLLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGFIITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVDSGVGQYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVMETLISIMGLLGVLAINAVLH
>NZ_CP048304.1|WP_000998695.1|4843886_4844651_+|gluconate-5-dehydrogenase
MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV
>NZ_CP048304.1|WP_001197423.1|4842831_4843863_+|L-idonate-5-dehydrogenase
MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKVIHSDSSKLHEGQTVAINPSKPCGHCKYCIEHNENQCTEMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLKGSFRFTSEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF
>NZ_CP048304.1|WP_000896740.1|4842051_4842615_-|gluconokinase
MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQDDEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE
>NZ_CP048304.1|WP_000061766.1|4841028_4842048_+|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDIEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKTLAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF
>NZ_CP048304.1|WP_000786399.1|4853058_4853502_+|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_CP048304.1|WP_000416368.1|4853501_4856357_+|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDIYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP048304.1|WP_001000681.1|4856403_4857591_-|DUF898-family-protein
MNDVNIGKDNSRHSFVFTGKGGEYFLICLVNFLLTIITLGIYGPWALIKCRRYIYQHVTLKGQPFSYKGTGGAIFVSMLLIVVVYLLSISCFAGQHFALGLFLFALLICGIPCMAVKSLQYQANMTSLNDIRFGFNCSMMRAWWVMLGLPVLLALVFWFALYLIAQVTTSIGGLFFNLVALSLLSAIGLGVVHGITYSKWMPLLGNNATFGIHKFSIQVNVKECIKGCMLAILTMVPFIIVIGIMIAPVFQQLMMMTMLGGSDAGSEFVLQYYPQIMASYFLYFVAILVFASYLYVTLRNLFLNNLTLANGTIRFHSSVTAIGMLLRMLAVLMGSSITCGLAYPWLKMWMVSWIANNTHVQGDLDSLELTNDDKPQDSGSLMWISRGIMPYVPFI
>NZ_CP048304.1|WP_001298035.1|4857783_4858287_+|GNAT-family-N-acetyltransferase
MNVVASPALRLRKLTVADNPAIAHVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLRKL
>NZ_CP048304.1|WP_000002950.1|4858464_4858881_-|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGDDGDDEDFVDEDDDGIRH
>NZ_CP048304.1|WP_000012936.1|4859042_4860047_+|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEARLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVAECSALAQKHGGKITLTEDIASGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSKMMALTGNSQVKFLHCLPAFHDEQTTLGKKMAAEFGLYGGMEVTDEVFESPASIVFDQAENRMHTIKAVMVATLAK
>NZ_CP048304.1|WP_000635216.1|4860091_4860544_-|YhcH/YjgK/YiaL-family-protein
MIVGNIHHLQSWLPEELREAIEYIKSHVSDETAKGKHAIDGDRLFYLISEDTTEPGELRRAEYHARYLDIQIVLKGQEGMTFSTQPAGVPETDWLADKDIAFIGQGIDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKLLKS
>NZ_CP048304.1|WP_001346533.1|4861221_4862442_+|arginine-deiminase
MEKHYVGSEIGQLRSVMLHRPNLSLKRLTPSNCQELLFDDVLSVERAGEEHDIFANTLRQQGIEVLLLTDLLTQTLDIPEAKSWLLETQISDYRLGPTFATDVRTWLAEMSHRDLARHLSGGLTYSEIPASIKNMVVDTHDINDFIMKPLPNHLFTRDTSCWIYNGVSINPMAKPARQRETNNLRAIYRWHPQFAGGEFIKYFGDENINYDHATLEGGDVLVIGRGAVLIGMSERTTPQGIEFLAQALFKHRQAERVIAVELPKHRSCMHLDTVMTHIDIDTFSVYPEVVRPDVNCWTLTPDGHGGLKRTQESTLLHAIEKALGIDQVRLITTGGDAFEAEREQWNDANNVLTLRPGVVVGYERNIWTNEKYDKAGITVLPIPGDELGRGRGGARCMSCPLHRDGI
>NZ_CP048304.1|WP_000428627.1|4862452_4863385_+|carbamate-kinase
MENKPTLVIALGGNALLKRGEPLEAEIQRKNIDLAAKTIAQLTQHWRVVLVHGNGPQVGLLALQNSAYAHVAPYPLDILGAESQGMIGYMLQQALKNQLPQREISVLLTQVEVDANDPAFSNPTKYIGPIYDHAQTQVLQAEKGWVFKADGHSFRRVVPSPQPKRIVERDAIQTLIAHDHLVICNGGGGVPVVEKADGYHGIEAVIDKDLSAALLASQIHADALLILTDADAVYLDWGKPTQRPLAQVTPELLNEMQFDAGSMGPKVTACAKFVSQCRGIAGIGSLADGPEILAGDKGTLIRLDTPHNHA
>NZ_CP048304.1|WP_000235828.1|4863408_4864413_+|ornithine-carbamoyltransferase
MATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRTRCAFEVAAFDQGAQVTYIGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGEFAGVPVWNGLTNEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGEPKEAWAERVSLMAPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLEVTEEVFESAHSIVFDEAENRMHTIKAVMVATLGD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048304_3	3.1\|3463526\|40\|NZ_CP048304\|CRISPRCasFinder	3463526-3463565	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	1	0.975
NZ_CP048304_2	2.1\|2787072\|38\|NZ_CP048304\|CRISPRCasFinder	2787072-2787109	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12113-12164	10	0.808
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	272-323	10	0.808
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31252-31303	10	0.808
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4115-4166	11	0.788
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4114-4165	11	0.788
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4114-4165	11	0.788
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4114-4165	11	0.788
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	152-203	11	0.788
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208982-209033	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	44-95	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219476-219527	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	43-94	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18332-18383	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210310-210361	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	43-94	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191265-191316	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	43-94	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7393-7444	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84217-84268	12	0.769
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3373-3424	13	0.75
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3372-3423	13	0.75
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15000-15051	13	0.75
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3372-3423	13	0.75
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3372-3423	13	0.75
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	70-121	14	0.731
NZ_CP048304_4	4.1\|4852862\|52\|NZ_CP048304\|CRISPRCasFinder	4852862-4852913	52	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30159-30210	14	0.731

1. spacer 3.1|3463526|40|NZ_CP048304|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

2. spacer 2.1|2787072|38|NZ_CP048304|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

3. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.808

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
acgggcgactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccga	Protospacer
.*.   .*********************** *****************  *

4. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 10, identity: 0.808

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggtaacg-gtttgtaggcctgataagacgcgacagcgtcgcatcaggcattga	Protospacer
 *.* .* ..*.*************************************  *

5. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 10, identity: 0.808

--gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
tggcaacgg--ctgtaggcctgataagacgcgacagcgtcgcatcaggcattga	Protospacer
  *** .*.  ..*************************************  *

6. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggcac-aagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctg	Protospacer
 **** .*..*.****** ************ *****************

7. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggcac-aagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctg	Protospacer
 **** .*..*.****** ************ *****************

8. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggcac-aagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctg	Protospacer
 **** .*..*.****** ************ *****************

9. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggcac-aagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctg	Protospacer
 **** .*..*.****** ************ *****************

10. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 11, identity: 0.788

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
gctcgggtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaa	Protospacer
** * *. ** ******************* ****************   .

11. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

----gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ******************* *****************

12. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  .

13. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

----gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ******************* *****************

14. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  .

15. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  .

16. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

----gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ******************* *****************

17. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  .

18. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

----gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ******************* *****************

19. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  .

20. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 12, identity: 0.769

---gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
agtgcagt---tttgtaggcatgataagacgcgccagcgtcgcatcaggcatccg	Protospacer
   *** *   .*.****** ************ *****************

21. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 12, identity: 0.769

---gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
agtgcagt---tttgtaggcatgataagacgcgccagcgtcgcatcaggcatccg	Protospacer
   *** *   .*.****** ************ *****************

22. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************

23. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************

24. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************

25. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************

26. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************

27. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 14, identity: 0.731

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggttcaggtccgtaggcatgataagacgcgtcagcgtcgcatcaggcatcgg	Protospacer
*  .......******* ************ *****************  *

28. spacer 4.1|4852862|52|NZ_CP048304|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 14, identity: 0.731

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
gggtgcagattgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
* ..  *. *.****** ************ *****************  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1271115 : 1312068

Stx2-converting_phage(27.27%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000997995.1\|1271115_1272654_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.2e-281	93.9
WP_000624646.1\|1273781_1274132_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	5.4e-36	62.1
WP_000435655.1\|1274128_1274554_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.6e-34	74.2
WP_085949591.1\|1274925_1275063_-	hypothetical protein	NA	NA	NA	NA
WP_001149834.1\|1275214_1276132_+	N-acetylneuraminate lyase	NA	NA	NA	NA
WP_000629094.1\|1276165_1277041_+	N-acetylmannosamine kinase	NA	NA	NA	NA
WP_000376547.1\|1277089_1278562_+	MFS transporter	Q6JIH2	Burkholderia_virus	2.2e-06	22.7
WP_000948500.1\|1278565_1279396_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001296386.1\|1279441_1280152_+	N-acetylneuraminic acid channel protein	NA	NA	NA	NA
WP_000865295.1\|1280164_1281274_+	N-acetylneuraminate epimerase	NA	NA	NA	NA
WP_001030790.1\|1281335_1282259_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001282578.1\|1282294_1283029_-	transcriptional regulator NanR	NA	NA	NA	NA
WP_000274668.1\|1283128_1284115_+	hypothetical protein	Q08JA2	Stx2-converting_phage	4.0e-108	57.7
WP_103103189.1\|1284266_1285494_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	7.2e-168	94.4
WP_001223344.1\|1285994_1288085_+	bifunctional siderophore receptor/adhesin Iha	A0A0P0I887	Acinetobacter_phage	2.6e-08	31.5
WP_001305021.1\|1288916_1289189_+	hypothetical protein	NA	NA	NA	NA
WP_001529396.1\|1289479_1289848_+	hypothetical protein	NA	NA	NA	NA
WP_000266542.1\|1289851_1290067_+	hypothetical protein	NA	NA	NA	NA
WP_032212789.1\|1293944_1294799_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-68	45.4
WP_001254932.1\|1294847_1295999_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001034083.1\|1296595_1300483_-\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	1.2e-227	39.0
WP_000973516.1\|1301426_1303628_-	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_001576313.1\|1303709_1304987_-	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_001015715.1\|1304983_1306726_-	aerobactin synthase IucC	NA	NA	NA	NA
WP_001287500.1\|1306725_1307673_-	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001296374.1\|1307673_1309398_-	aerobactin synthase IucA	NA	NA	NA	NA
WP_000074472.1\|1309533_1310727_+	MFS transporter	NA	NA	NA	NA
WP_103103190.1\|1310839_1312068_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.2e-170	95.3

DBSCAN-SWA_2

1584835 : 1591975

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001279001.1\|1584835_1585474_-	aldolase	A0A077SK32	Escherichia_phage	2.8e-83	75.0
WP_000590418.1\|1585470_1586733_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_000847998.1\|1586729_1587638_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.1e-118	76.9
WP_001272544.1\|1587803_1588601_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	5.0e-69	57.0
WP_001141289.1\|1588651_1589308_-	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	2.8e-49	45.2
WP_000103863.1\|1589413_1591975_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8

DBSCAN-SWA_3

1922913 : 1935864

Escherichia_phage(83.33%)

integrase

attL 1917874:1917887|attR 1925012:1925025

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1917874:1917887	attL	NA	NA	NA	NA
WP_001224626.1\|1922913_1923483_-\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	7.0e-49	52.2
WP_001181152.1\|1924230_1924860_+\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	1.6e-118	99.0
WP_000243056.1\|1925177_1925798_+	LuxR family transcriptional regulator	A0A2L1IV08	Escherichia_phage	5.9e-118	99.0
1925012:1925025	attR	NA	NA	NA	NA
WP_001617156.1\|1925822_1933766_+	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV38	Escherichia_phage	0.0e+00	99.3
WP_000100043.1\|1933813_1934344_+	OmpH family outer membrane protein	A0A2L1IV11	Escherichia_phage	5.1e-86	99.4
WP_000368121.1\|1934931_1935864_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	4.6e-167	99.0

DBSCAN-SWA_4

2183949 : 2193394

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569381.1\|2183949_2184876_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	2.8e-23	30.8
WP_000783150.1\|2184880_2185612_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|2185592_2185700_-	protein YohO	NA	NA	NA	NA
WP_001240404.1\|2185759_2186491_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.2e-111	99.0
WP_001295431.1\|2186712_2188398_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_000598641.1\|2188394_2189114_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|2189160_2189631_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001296231.1\|2189671_2190133_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001327380.1\|2190257_2192261_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.1
WP_001305166.1\|2192257_2193394_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	3.8e-163	97.7

DBSCAN-SWA_5

3248416 : 3350214

139

Enterobacteria_phage(46.9%)

protease,terminase,holin,portal,tail,capsid,tRNA,integrase,head,lysis

attL 3250610:3250623|attR 3294012:3294025

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000654167.1\|3248416_3248695_-	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	7.6e-25	56.5
WP_000290543.1\|3248691_3250752_-\|tail	phage tail protein	A0A0E3M194	Enterobacteria_phage	2.0e-125	53.4
3250610:3250623	attL	NA	NA	NA	NA
WP_000515327.1\|3250810_3254293_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.5
WP_000090917.1\|3254353_3254986_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.9e-97	100.0
WP_000140699.1\|3254922_3255666_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.1e-147	97.2
WP_001152660.1\|3255671_3256370_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.0e-131	97.8
WP_000847405.1\|3256369_3256699_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	5.4e-54	94.5
WP_000840269.1\|3256695_3259257_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	94.5
WP_000459474.1\|3259249_3259684_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	9.0e-57	90.0
WP_000479129.1\|3259665_3260088_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.7e-66	91.4
WP_001351266.1\|3260103_3260844_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	3.7e-127	95.9
WP_000683101.1\|3260851_3261247_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	5.5e-69	97.7
WP_000975062.1\|3261243_3261822_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.9e-79	99.0
WP_001204540.1\|3261833_3262187_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	3.4e-38	65.0
WP_000201530.1\|3262179_3262554_-	hypothetical protein	NA	NA	NA	NA
WP_000522648.1\|3262605_3263634_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	5.9e-115	61.6
WP_021528532.1\|3263691_3264039_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	4.4e-22	57.0
WP_021527086.1\|3264075_3265581_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.0e-99	53.5
WP_000831761.1\|3265570_3267163_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.2e-184	60.9
WP_000258997.1\|3267159_3267366_-\|head	phage head-stabilizing protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
WP_001335577.1\|3267349_3269278_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	2.5e-260	66.7
WP_000867568.1\|3269249_3269798_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
WP_000881610.1\|3270360_3270543_-	hypothetical protein	NA	NA	NA	NA
WP_000830178.1\|3270749_3271076_-	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_033551444.1\|3271556_3271850_+	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	2.0e-44	91.8
WP_001228695.1\|3271940_3272123_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001135277.1\|3272339_3272837_-	lysozyme	M1FJA0	Enterobacteria_phage	5.4e-90	97.0
WP_000839596.1\|3272836_3273052_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_000737271.1\|3273640_3274723_+	porin OmpC	Q1MVN1	Enterobacteria_phage	1.6e-166	80.1
WP_001204776.1\|3274911_3275295_-	antitermination protein QuuD	A0A088CD47	Shigella_phage	1.5e-55	83.3
WP_000971053.1\|3275380_3275521_-	YlcG family protein	K7PHH3	Enterobacteria_phage	3.6e-07	67.4
WP_001099712.1\|3275517_3275880_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	4.3e-60	96.5
WP_000950951.1\|3275899_3276094_-	protein ninF	NA	NA	NA	NA
WP_000386643.1\|3276086_3276428_-	DUF2591 family protein	Q76H72	Enterobacteria_phage	1.6e-61	96.5
WP_001254243.1\|3276430_3276607_-	NinE family protein	A5VW90	Enterobacteria_phage	3.3e-26	96.6
WP_000153286.1\|3276603_3277131_-	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	4.7e-100	99.4
WP_000736913.1\|3277127_3277568_-	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.2e-80	100.0
WP_000145927.1\|3277641_3277932_-	protein ren	O48423	Enterobacteria_phage	2.8e-46	97.9
WP_000788872.1\|3277928_3278630_-	Replication protein 14	A0A0P0ZD31	Stx2-converting_phage	2.9e-129	99.6
WP_000185431.1\|3278626_3279526_-	replication protein	K7P7F0	Enterobacteria_phage	3.5e-172	99.0
WP_000442609.1\|3279558_3279855_-	hypothetical protein	G9L678	Escherichia_phage	2.2e-46	94.9
WP_000067727.1\|3279996_3280212_-	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
WP_001302016.1\|3280287_3280983_+	LexA family transcriptional regulator	A0A0N7BTS4	Escherichia_phage	8.6e-134	100.0
WP_001062368.1\|3281022_3281580_+	hypothetical protein	NA	NA	NA	NA
WP_000968518.1\|3281576_3282329_+	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_000438342.1\|3282605_3282788_+	hypothetical protein	A0A0N7C057	Escherichia_phage	1.1e-27	98.3
WP_000088199.1\|3282765_3283038_+	hypothetical protein	A0A0N7C217	Escherichia_phage	2.8e-40	98.9
WP_001066176.1\|3283054_3283636_-	superinfection exclusion protein B	K7P6T7	Enterobacteria_phage	5.2e-92	92.2
WP_000213979.1\|3283849_3284050_+	Restriction inhibitor protein ral	A0A0K2FJE6	Enterobacteria_phage	7.1e-33	98.5
WP_000065374.1\|3284232_3284601_+	DUF2528 family protein	M1FPD2	Enterobacteria_phage	2.0e-65	100.0
WP_001198860.1\|3284673_3284838_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A0N6WES3	Escherichia_phage	1.4e-26	100.0
WP_000372923.1\|3284806_3284950_+	host cell division inhibitory peptide Kil	A0A0N7C2U2	Escherichia_phage	2.7e-18	97.9
WP_000995434.1\|3285025_3285322_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.1e-48	98.0
WP_000100847.1\|3285327_3286113_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000186790.1\|3286109_3286790_+	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	5.1e-131	99.1
WP_000149544.1\|3286786_3286969_+	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	6.9e-27	96.7
WP_000548537.1\|3286941_3287133_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
WP_001360114.1\|3287143_3287425_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
WP_000763378.1\|3287523_3287745_+	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	8.4e-35	97.3
WP_001289890.1\|3287741_3288506_+	ead/Ea22-like family protein	K7PKG8	Enterobacteria_phage	3.6e-56	94.8
WP_001518554.1\|3288507_3288762_+	hypothetical protein	A5LH60	Enterobacteria_phage	1.7e-34	91.1
WP_001327280.1\|3288779_3289313_+	hypothetical protein	Q1MVF7	Enterobacteria_phage	2.5e-64	82.1
WP_000951713.1\|3289314_3289524_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.3e-32	91.2
WP_000208010.1\|3289520_3290261_+	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	6.5e-47	67.1
WP_001304460.1\|3290253_3290538_+	ASCH domain-containing protein	A0A2D1GLL3	Escherichia_phage	4.0e-45	89.4
WP_000490215.1\|3290563_3290803_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	8.8e-38	93.7
WP_000088653.1\|3290942_3291179_+	excisionase	NA	NA	NA	NA
WP_000741334.1\|3291168_3292311_+\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	1.1e-205	99.7
WP_000444487.1\|3292424_3293675_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
WP_021566796.1\|3293846_3294500_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
3294012:3294025	attR	NA	NA	NA	NA
WP_000476093.1\|3294509_3294971_+	phosphatase NudJ	NA	NA	NA	NA
WP_001443105.1\|3295024_3296131_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_001295971.1\|3296166_3296808_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_000423742.1\|3296811_3298182_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
WP_001265481.1\|3298351_3299023_+	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000734671.1\|3299022_3300483_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001295435.1\|3300558_3301680_+	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_000359446.1\|3301728_3302955_-	peptidase T	NA	NA	NA	NA
WP_000531594.1\|3303204_3304341_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
WP_000799413.1\|3304324_3305188_+	spermidine/putrescine ABC transporter permease PotB	NA	NA	NA	NA
WP_000937496.1\|3305419_3305686_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.3e-18	78.3
WP_000742376.1\|3305754_3306411_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_071586406.1\|3306465_3306564_-\|tail	phage tail protein	K7PMH7	Enterobacteria_phage	1.2e-06	78.1
WP_000355700.1\|3306603_3306897_-	hypothetical protein	NA	NA	NA	NA
WP_001204582.1\|3306906_3307185_-	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	1.0e-21	50.5
WP_021566795.1\|3307181_3309245_-\|tail	phage tail fiber protein	A0A1X7QGG5	Escherichia_phage	1.1e-147	62.5
WP_001228261.1\|3309396_3309996_-	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	4.4e-102	92.5
WP_000514735.1\|3310063_3313756_-	DUF1983 domain-containing protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	85.8
WP_072258937.1\|3314099_3314732_-\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	1.7e-96	92.3
WP_001576728.1\|3314677_3315421_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	8.3e-143	93.4
WP_001327694.1\|3315426_3316125_-\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	7.6e-130	97.0
WP_000847298.1\|3316124_3316454_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_000082402.1\|3316450_3319012_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	90.0
WP_000533402.1\|3318992_3319406_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_001299690.1\|3319432_3319864_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	67.4
WP_000235037.1\|3319882_3320629_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	8.7e-124	93.4
WP_000683079.1\|3320636_3321032_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000974995.1\|3321028_3321562_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.2e-55	64.1
WP_001204571.1\|3321577_3321931_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.1e-41	70.1
WP_000201498.1\|3321923_3322307_-	hypothetical protein	NA	NA	NA	NA
WP_000522583.1\|3322358_3323387_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	8.6e-114	61.9
WP_000256835.1\|3323444_3323792_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.9e-21	55.9
WP_001253953.1\|3323828_3325334_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.7e-100	53.5
WP_001537684.1\|3325323_3326916_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.9e-185	61.3
WP_000258993.1\|3326912_3327119_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
WP_021566794.1\|3327102_3329031_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.0e-261	66.4
WP_000235436.1\|3329002_3329512_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_000881610.1\|3330081_3330264_-	hypothetical protein	NA	NA	NA	NA
WP_000830178.1\|3330470_3330797_-	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_032142285.1\|3331107_3331575_-\|lysis	lysis protein	Q6H9V3	Enterobacteria_phage	6.7e-66	84.4
WP_001280932.1\|3331577_3331709_-	hypothetical protein	A0A0P0ZG36	Escherichia_phage	2.6e-07	79.1
WP_001446668.1\|3331723_3331906_-	hypothetical protein	NA	NA	NA	NA
WP_001092866.1\|3332062_3332596_-	lysozyme	Q6H9V6	Enterobacteria_phage	6.7e-102	97.2
WP_001037014.1\|3332632_3333523_-	YdfR family protein	Q08JA0	Stx2-converting_phage	2.1e-108	70.9
WP_000284506.1\|3333527_3333743_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_001538590.1\|3333819_3334065_-	DUF826 domain-containing protein	S5MW40	Escherichia_phage	8.8e-17	92.6
WP_023143432.1\|3334102_3334285_-	DUF1378 family protein	S5MBZ5	Escherichia_phage	5.1e-22	85.0
WP_001550966.1\|3334421_3336383_-	SASA family carbohydrate esterase	A0A0P0ZBH7	Stx2-converting_phage	5.6e-239	64.1
WP_001336019.1\|3336643_3336979_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	1.4e-44	75.7
WP_000562553.1\|3337259_3337391_-	DUF3927 family protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
WP_001545909.1\|3338286_3339108_-	antitermination protein	K7P7B9	Enterobacteria_phage	1.8e-77	58.6
WP_000139998.1\|3339122_3339485_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	9.6e-36	63.6
WP_001550965.1\|3339485_3340544_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.7e-88	47.7
WP_023141427.1\|3340545_3340818_-	hypothetical protein	I6PCV7	Cronobacter_phage	4.2e-12	50.8
WP_000813254.1\|3340985_3341141_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_011076332.1\|3341399_3341618_-	hypothetical protein	NA	NA	NA	NA
WP_001550964.1\|3342231_3342414_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	2.4e-27	98.3
WP_000761441.1\|3342507_3342921_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	2.0e-58	99.2
WP_001151150.1\|3342921_3343344_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.6e-64	90.6
WP_001262390.1\|3343384_3344455_-	hypothetical protein	A0A088CD36	Shigella_phage	2.6e-52	56.6
WP_000693850.1\|3344526_3344952_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000747951.1\|3344935_3345178_-	hypothetical protein	H9C161	Pectobacterium_phage	4.8e-07	55.8
WP_001420344.1\|3345569_3345908_+	peptidase S24	H9C160	Pectobacterium_phage	2.5e-06	32.0
WP_000379575.1\|3346200_3346356_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_001171946.1\|3346515_3346734_+	hypothetical protein	NA	NA	NA	NA
WP_001517906.1\|3346698_3346902_-	hypothetical protein	NA	NA	NA	NA
WP_000854558.1\|3347302_3347491_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001070259.1\|3347487_3347679_+	DUF1482 family protein	NA	NA	NA	NA
WP_000102136.1\|3347772_3350214_+	exonuclease	V5UQJ3	Shigella_phage	3.1e-114	46.9

DBSCAN-SWA_6

3583693 : 3648764

Pseudomonas_phage(22.22%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001241667.1\|3583693_3584398_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3584682_3584901_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_001304477.1\|3585407_3586235_-	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_000772027.1\|3586319_3586517_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_001054232.1\|3586536_3587025_-	hypothetical protein	NA	NA	NA	NA
WP_000854739.1\|3587021_3587402_-	toxin	NA	NA	NA	NA
WP_001285481.1\|3587448_3587823_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_001617449.1\|3587872_3588517_-	hypothetical protein	A0A2I6PI07	Pseudomonas_phage	3.0e-24	32.0
WP_000692312.1\|3588535_3588757_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	8.5e-11	45.8
WP_001186170.1\|3588819_3589296_-	RadC family protein	NA	NA	NA	NA
WP_001313575.1\|3589311_3589785_-	antirestriction protein	A9J566	Pseudomonas_phage	4.3e-12	31.2
WP_001234710.1\|3590047_3590869_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	2.2e-43	36.7
WP_000902034.1\|3590969_3591203_-	DUF905 family protein	NA	NA	NA	NA
WP_000581502.1\|3591281_3591737_-	hypothetical protein	NA	NA	NA	NA
WP_021533825.1\|3591812_3594329_-	hypothetical protein	NA	NA	NA	NA
WP_038356109.1\|3594449_3597575_-	autotransporter adhesin Ag43	NA	NA	NA	NA
WP_001069772.1\|3597899_3598772_-	GTPase family protein	NA	NA	NA	NA
WP_001304575.1\|3600443_3600803_+	hypothetical protein	NA	NA	NA	NA
WP_000997076.1\|3601741_3602284_-	hypothetical protein	NA	NA	NA	NA
WP_000516335.1\|3602319_3603456_-	hypothetical protein	NA	NA	NA	NA
WP_001327488.1\|3604406_3605606_-	hypothetical protein	NA	NA	NA	NA
WP_000977398.1\|3605869_3606661_-	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_001445605.1\|3606679_3608650_-	TonB-dependent receptor	NA	NA	NA	NA
WP_011076310.1\|3611177_3611540_-	hypothetical protein	NA	NA	NA	NA
WP_000526115.1\|3612720_3613179_-\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	5.5e-12	31.5
WP_000805228.1\|3613356_3613656_-	hypothetical protein	NA	NA	NA	NA
WP_001221122.1\|3614193_3615309_+	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	NA	NA
WP_106408132.1\|3615322_3619108_+	salmochelin/enterobactin export ABC transporter IroC	W8CYL7	Bacillus_phage	3.7e-45	29.8
WP_000933673.1\|3619211_3620441_+	catecholate siderophore esterase IroD	NA	NA	NA	NA
WP_000271272.1\|3620525_3621482_+	catecholate siderophore esterase IroE	NA	NA	NA	NA
WP_001222189.1\|3621526_3623704_-	siderophore salmochelin receptor IroN	NA	NA	NA	NA
WP_063611012.1\|3623933_3624971_+\|transposase	IS630-like element ISEc40 family transposase	NA	NA	NA	NA
WP_128888113.1\|3625296_3625797_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000012016.1\|3625994_3626735_-	EAL domain-containing protein	NA	NA	NA	NA
WP_085949152.1\|3627785_3629058_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-172	96.7
WP_000767894.1\|3629335_3629839_-	F1C fimbria minor subunit FocG	NA	NA	NA	NA
WP_000237770.1\|3629860_3630388_-	S/F1C fimbrial adhesin minor pilin SfaG/FocF	NA	NA	NA	NA
WP_001443207.1\|3630400_3633031_-	S/F1C fimbrial biogenesis usher protein SfaF/FocD	NA	NA	NA	NA
WP_000975445.1\|3633100_3633796_-	sfa/F1C fimbrial biogenesis chaperone	NA	NA	NA	NA
WP_011076308.1\|3633836_3634361_-	S/F1C fimbrial minor subunit SfaD	NA	NA	NA	NA
WP_000768217.1\|3634446_3634989_-	fimbrial protein	NA	NA	NA	NA
WP_000046975.1\|3635360_3635690_-	S/F1C fimbrial major subunit operon transcriptional regulator	NA	NA	NA	NA
WP_011076307.1\|3636045_3636330_+	S/F1C fimbrial major subunit operon transcriptional regulator	NA	NA	NA	NA
WP_001443206.1\|3636604_3637174_-	hypothetical protein	NA	NA	NA	NA
WP_001167423.1\|3637415_3637928_-	hypothetical protein	NA	NA	NA	NA
WP_001528902.1\|3638385_3638844_+	hypothetical protein	NA	NA	NA	NA
WP_000426105.1\|3638943_3639630_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_001318125.1\|3639804_3640083_-	microcin McmA	NA	NA	NA	NA
WP_001183592.1\|3640336_3642451_-	microcin export transporter peptidase/ATP-binding subunit MchF	F2Y165	Organic_Lake_phycodnavirus	4.2e-14	24.4
WP_001327747.1\|3642425_3643667_-	HlyD family secretion protein	NA	NA	NA	NA
WP_000120459.1\|3643852_3644305_-	toxin-activating lysine-acyltransferase	NA	NA	NA	NA
WP_000019322.1\|3644330_3645881_-	hypothetical protein	NA	NA	NA	NA
WP_001375214.1\|3646152_3646380_-	microcin H47	NA	NA	NA	NA
WP_000120662.1\|3646396_3646606_-	microcin H47 immunity protein MchI	NA	NA	NA	NA
WP_000165817.1\|3647614_3647839_+\|transposase	transposase	NA	NA	NA	NA
WP_000878259.1\|3647909_3648764_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.8e-49	40.5

DBSCAN-SWA_7

4780660 : 4840599

Enterobacteria_phage(22.22%)

integrase,transposase

attL 4839160:4839174|attR 4841469:4841483

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021515317.1\|4780660_4782046_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.3e-258	89.1
WP_000823243.1\|4782284_4783643_-	esterase-like activity of phytase family protein	NA	NA	NA	NA
WP_000555341.1\|4784393_4784651_-	hypothetical protein	NA	NA	NA	NA
WP_001283626.1\|4785568_4786090_+	RNA polymerase sigma factor FecI	NA	NA	NA	NA
WP_001068910.1\|4786086_4787040_+	fec operon regulator FecR	NA	NA	NA	NA
WP_000188248.1\|4787126_4789451_+	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_000879153.1\|4789495_4790398_+	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_000125175.1\|4790394_4791393_+	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_000684856.1\|4791389_4792346_+	Fe(3+) dicitrate ABC transporter permease subunit FecD	A0A2H4IY97	uncultured_Caudovirales_phage	1.1e-17	26.1
WP_000175457.1\|4792346_4793114_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	6.4e-13	24.8
WP_000177057.1\|4793671_4793929_-	hypothetical protein	NA	NA	NA	NA
WP_160371899.1\|4795393_4796236_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_001388979.1\|4796238_4797327_+	putative hexosyltransferase CapU	NA	NA	NA	NA
WP_001387303.1\|4797331_4798282_+	virulence factor VirK	NA	NA	NA	NA
WP_021566757.1\|4798346_4799291_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_016245226.1\|4799471_4800611_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.5e-68	45.1
WP_001293435.1\|4800764_4802762_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	7.4e-21	25.9
WP_000625669.1\|4802824_4804102_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_000145474.1\|4804347_4805004_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_001422798.1\|4805184_4805313_-	alcohol dehydrogenase	NA	NA	NA	NA
WP_001387298.1\|4806411_4806510_+	acetolactate synthase	NA	NA	NA	NA
WP_162655261.1\|4806511_4807294_-	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_000350265.1\|4807599_4808520_+	ribokinase	NA	NA	NA	NA
WP_000998353.1\|4808547_4809864_+	L-fucose:H+ symporter permease	NA	NA	NA	NA
WP_000107474.1\|4809875_4810889_+	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_001327567.1\|4811310_4811565_+\|transposase	transposase	Q6H9S5	Enterobacteria_phage	8.0e-21	62.2
WP_000345347.1\|4811811_4813068_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_000705930.1\|4813080_4813368_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_042092416.1\|4813383_4813827_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000416151.1\|4814097_4815129_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.4e-18	27.0
WP_001215044.1\|4817098_4817263_-	hypothetical protein	NA	NA	NA	NA
WP_000859648.1\|4817374_4818064_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_001351184.1\|4818063_4819620_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_001114712.1\|4819785_4820610_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_000729465.1\|4821520_4822150_+	hypothetical protein	NA	NA	NA	NA
WP_001104341.1\|4822200_4823277_-	Fic family protein	NA	NA	NA	NA
WP_001099275.1\|4823906_4824203_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_085949152.1\|4824796_4826069_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-172	96.7
WP_068879494.1\|4826414_4827083_+	hypothetical protein	NA	NA	NA	NA
WP_063611012.1\|4827066_4828104_-\|transposase	IS630-like element ISEc40 family transposase	NA	NA	NA	NA
WP_125079971.1\|4828113_4828638_+	hypothetical protein	NA	NA	NA	NA
WP_000643690.1\|4828910_4830107_+	DNA cytosine methyltransferase	A0A191SAU1	Nostoc_phage	2.2e-36	30.8
WP_000886597.1\|4833161_4834985_+	hypothetical protein	NA	NA	NA	NA
WP_000202281.1\|4835229_4836102_+	restriction endonuclease	NA	NA	NA	NA
WP_001143292.1\|4836469_4836763_+	hypothetical protein	NA	NA	NA	NA
WP_001223819.1\|4838063_4839683_+	DNA-binding domain-containing protein	NA	NA	NA	NA
4839160:4839174	attL	NA	NA	NA	NA
WP_000142493.1\|4839672_4840599_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_000142493.1\|4839672_4840599_+\|integrase	site-specific integrase	NA	NA	NA	NA
4841469:4841483	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP048305

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

100725 : 119973

Salmonella_phage(33.33%)

integrase,transposase

attL 99784:99798|attR 107393:107407

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
99784:99798	attL	NA	NA	NA	NA
WP_000427619.1\|100725_101730_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_001138073.1\|101808_104781_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
WP_001162012.1\|104783_105341_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_002075255.1\|105646_106660_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
WP_013263789.1\|106826_107627_+	subclass B1 metallo-beta-lactamase VIM-1	NA	NA	NA	NA
107393:107407	attR	NA	NA	NA	NA
WP_013263788.1\|107720_108179_+	aminoglycoside N-acetyltransferase AAC(6')-Il	NA	NA	NA	NA
WP_000777555.1\|108321_108795_+	trimethoprim-resistant dihydrofolate reductase DfrA1	G3MBI7	Bacillus_virus	3.7e-19	32.1
WP_032491400.1\|109677_109995_+	multidrug efflux SMR transporter Smr	NA	NA	NA	NA
WP_032492010.1\|110273_111317_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000679427.1\|111539_111887_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|111880_112720_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000050481.1\|113124_114666_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_012579084.1\|114929_115586_+	quinolone resistance pentapeptide repeat protein QnrA1	NA	NA	NA	NA
WP_004193231.1\|115771_116647_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_025999322.1\|116650_117016_-	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
WP_000376623.1\|118201_118702_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001389365.1\|119208_119973_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048306

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP048304

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP048305

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection