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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP048361 Escherichia coli strain 53 plasmid p53_B, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP048360 Escherichia coli strain 53 plasmid p53_A, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP048366 Escherichia coli strain 53 plasmid p53_G, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP048364 Escherichia coli strain 53 plasmid p53_E-OXA48, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP048359 Escherichia coli strain 53 chromosome, complete genome 9 crisprs csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL,TnsE_C 0 16 10 0
NZ_CP048362 Escherichia coli strain 53 plasmid p53_C, complete sequence 0 crisprs DEDDh 0 0 0 0
NZ_CP048363 Escherichia coli strain 53 plasmid p53_D, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP048365 Escherichia coli strain 53 plasmid p53_F, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP048359
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048359_1 628703-628954 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048359_2 643535-643652 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048359_3 1035561-1036321 Orphan I-E
12 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048359_4 1064588-1064982 TypeI-E I-E
6 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048359_5 2213484-2213607 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048359_6 2933771-2933862 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048359_7 3255505-3255650 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048359_8 4063861-4063993 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048359_9 4849410-4849549 Orphan NA
2 spacers
TnsE_C

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP048359_6 6.1|2933797|40|NZ_CP048359|CRISPRCasFinder 2933797-2933836 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
NZ_CP048359_8 8.1|4063878|42|NZ_CP048359|PILER-CR 4063878-4063919 42 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141085-141126 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_KX774387 Providencia rettgeri strain 30905 plasmid pC131, complete sequence 10387-10419 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP053895 Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence 72648-72680 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_KU963389 Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence 15133-15165 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP047288 Proteus cibarius strain G11 plasmid p152, complete sequence 62060-62092 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP044485 Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence 28402-28434 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP025853 Escherichia coli strain 510016 plasmid p510016_36, complete sequence 25816-25848 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_KT754165 Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence 23240-23272 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP053372 Proteus cibarius strain G32 plasmid pG32-177, complete sequence 57315-57347 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP024247 Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2 64739-64771 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP053043 Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence 95158-95190 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 JX469830 Uncultured bacterium plasmid pG527, complete sequence 41349-41381 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP013819 Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence 10767-10799 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP025925 Escherichia coli strain 520873 plasmid p520873_36, complete sequence 13633-13665 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP025875 Escherichia coli strain 503458 plasmid p503458_37, complete sequence 10830-10862 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP013795 Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence 10767-10799 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP023380 Escherichia coli strain 127 plasmid p43, complete sequence 15396-15428 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP011314 Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence 172056-172088 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NC_008357 Pseudomonas aeruginosa plasmid pBS228, complete sequence 68063-68095 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP027138 Escherichia coli strain AR_0369 plasmid unnamed2 74789-74821 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP022673 Shigella sonnei strain 866 plasmid p866, complete sequence 78315-78347 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP045128 Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence 89271-89303 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_LT985250 Escherichia coli strain 170 plasmid RCS38_p, complete sequence 152291-152323 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_MK360096 Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence 17850-17882 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP053897 Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence 75880-75912 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_MF150120 Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence 40084-40116 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_KX756453 Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence 42453-42485 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NC_015472 Escherichia coli plasmid pECTm80, complete sequence 13464-13496 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP013800 Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence 12090-12122 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 MG516911 Proteus mirabilis plasmid pPm60, complete sequence 57128-57160 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP003997 Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence 42619-42651 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP054380 Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence 38153-38185 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NC_002525 Escherichia coli K-12 plasmid R721, complete sequence 10525-10557 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP048015 Acinetobacter towneri strain 205 plasmid pAT205, complete sequence 49215-49247 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP034054 Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence 140941-140973 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP047114 Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence 46467-46499 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP034046 Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence 150963-150995 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP027700 Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence 7471-7503 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP053899 Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence 116699-116731 0 1.0
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_MK264770 Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence 42620-42652 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_KX774387 Providencia rettgeri strain 30905 plasmid pC131, complete sequence 10443-10483 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_MF150120 Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence 40020-40060 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP053895 Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence 72704-72744 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_KX756453 Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence 42389-42429 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_KU963389 Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence 15189-15229 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP047288 Proteus cibarius strain G11 plasmid p152, complete sequence 62116-62156 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NC_015472 Escherichia coli plasmid pECTm80, complete sequence 13400-13440 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP044485 Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence 28458-28498 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP025853 Escherichia coli strain 510016 plasmid p510016_36, complete sequence 25872-25912 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_KT754165 Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence 23296-23336 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP013800 Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence 12026-12066 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP053372 Proteus cibarius strain G32 plasmid pG32-177, complete sequence 57371-57411 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP024247 Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2 64795-64835 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP053043 Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence 95214-95254 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 MG516911 Proteus mirabilis plasmid pPm60, complete sequence 57064-57104 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 JX469830 Uncultured bacterium plasmid pG527, complete sequence 41405-41445 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP013819 Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence 10823-10863 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP003997 Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence 42555-42595 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 CP025925 Escherichia coli strain 520873 plasmid p520873_36, complete sequence 13689-13729 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 CP025875 Escherichia coli strain 503458 plasmid p503458_37, complete sequence 10886-10926 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP013795 Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence 10823-10863 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 CP054380 Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence 38089-38129 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NC_002525 Escherichia coli K-12 plasmid R721, complete sequence 10461-10501 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP023380 Escherichia coli strain 127 plasmid p43, complete sequence 15452-15492 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP011314 Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence 172112-172152 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NC_008357 Pseudomonas aeruginosa plasmid pBS228, complete sequence 68119-68159 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP027138 Escherichia coli strain AR_0369 plasmid unnamed2 74845-74885 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP022673 Shigella sonnei strain 866 plasmid p866, complete sequence 78371-78411 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP048015 Acinetobacter towneri strain 205 plasmid pAT205, complete sequence 49151-49191 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP034054 Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence 140877-140917 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP047114 Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence 46403-46443 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP034046 Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence 150899-150939 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP045128 Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence 89327-89367 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP027700 Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence 7407-7447 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_LT985250 Escherichia coli strain 170 plasmid RCS38_p, complete sequence 152347-152387 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_MK360096 Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence 17906-17946 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP053899 Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence 116635-116675 0 1.0
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_MK264770 Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence 42556-42596 0 1.0
NZ_CP048359_8 8.2|4063937|40|NZ_CP048359|PILER-CR 4063937-4063976 40 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141028-141067 1 0.975
NZ_CP048359_5 5.1|2213527|38|NZ_CP048359|CRISPRCasFinder 2213527-2213564 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052804 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence 113091-113123 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP038508 Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence 228634-228666 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052788 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence 321488-321520 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052786 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence 10079-10111 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052838 Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence 13470-13502 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP051676 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence 201786-201818 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052779 Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence 212524-212556 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052832 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence 277011-277043 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 MN310378 Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence 73380-73412 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052806 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence 282696-282728 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052818 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence 1788-1820 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_MH476540 Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence 87104-87136 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052795 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence 166287-166319 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP047882 Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence 264306-264338 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052802 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence 197576-197608 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052840 Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence 9544-9576 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052836 Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence 222743-222775 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052828 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence 8856-8888 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052826 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence 292607-292639 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP016409 Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence 299316-299348 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP016407 Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence 299920-299952 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP016413 Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence 295999-296031 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_CP016411 Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence 293612-293644 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 CP052814 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence 281790-281822 2 0.939
NZ_CP048359_9 9.1|4849433|33|NZ_CP048359|PILER-CR 4849433-4849465 33 NZ_MG764552 Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence 61314-61346 2 0.939
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_CP053897 Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence 75936-75976 2 0.951
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 MN310378 Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence 73436-73476 2 0.951
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_MH476540 Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence 87160-87200 2 0.951
NZ_CP048359_9 9.2|4849489|41|NZ_CP048359|PILER-CR 4849489-4849529 41 NZ_MG764552 Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence 61250-61290 2 0.951
NZ_CP048359_4 4.6|1064922|32|NZ_CP048359|CRT 1064922-1064953 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246937-246968 3 0.906
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP038598 Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence 2052-2083 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP033827 Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence 693-724 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP029125 Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence 518-549 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_AP019693 Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence 2812-2843 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP030192 Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence 1835-1866 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP039274 Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence 118-149 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP016528 Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence 53-84 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP030227 Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence 3124-3155 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NC_013090 Endophytic bacterium LOB-07 plasmid pLK39, complete sequence 53-84 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP030009 Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence 2572-2603 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP011606 Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence 3835-3866 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NZ_CP044113 Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence 3639-3670 7 0.781
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 4458190-4458221 7 0.781
NZ_CP048359_4 4.6|1064922|32|NZ_CP048359|CRT 1064922-1064953 32 NZ_CP015038 Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence 112768-112799 7 0.781
NZ_CP048359_3 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035773-1035804 32 NC_019341 Pseudomonas syringae plasmid pNCPPB880-40, complete sequence 6612-6643 8 0.75
NZ_CP048359_3 3.6|1035895|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035895-1035926 32 AB452989 Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds 1966-1997 8 0.75
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_LR594673 Variovorax sp. PBL-E5 plasmid 3 475357-475388 8 0.75
NZ_CP048359_4 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT 1064617-1064648 32 MK448792 Streptococcus phage Javan521, complete genome 5596-5627 8 0.75
NZ_CP048359_4 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT 1064617-1064648 32 NC_009018 Streptococcus phage phi3396, complete genome 4847-4878 8 0.75
NZ_CP048359_4 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT 1064617-1064648 32 NC_004584 Streptococcus prophage 315.1, complete genome 5700-5731 8 0.75
NZ_CP048359_4 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT 1064617-1064648 32 MK448770 Streptococcus phage Javan477, complete genome 5596-5627 8 0.75
NZ_CP048359_4 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT 1064617-1064648 32 MK448978 Streptococcus phage Javan532, complete genome 5595-5626 8 0.75
NZ_CP048359_4 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT 1064617-1064648 32 MK448785 Streptococcus phage Javan507, complete genome 5595-5626 8 0.75
NZ_CP048359_4 4.2|1064678|32|NZ_CP048359|PILER-CR,CRT 1064678-1064709 32 NZ_CP006991 Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence 532343-532374 8 0.75
NZ_CP048359_4 4.4|1064800|32|NZ_CP048359|PILER-CR,CRT 1064800-1064831 32 MK448454 Streptococcus satellite phage Javan361, complete genome 9192-9223 8 0.75
NZ_CP048359_4 4.6|1064922|32|NZ_CP048359|CRT 1064922-1064953 32 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 1428097-1428128 8 0.75
NZ_CP048359_3 3.1|1035590|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035590-1035621 32 NC_019911 Yersinia phage phi80-18 complete genome 19449-19480 9 0.719
NZ_CP048359_3 3.1|1035590|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1035590-1035621 32 NC_047805 Yersinia phage fHe-Yen3-01, complete genome 20682-20713 9 0.719
NZ_CP048359_3 3.8|1036017|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036017-1036048 32 KT588075 Acinetobacter phage Ab105-2phi, complete genome 10451-10482 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_KX015668 Enterobacter cloacae strain CY01 plasmid pCY-CTX, complete sequence 115679-115710 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP033346 Salmonella enterica subsp. enterica serovar Tennessee strain CFSAN076210 plasmid pCFSAN076210, complete sequence 16902-16933 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP010386 Enterobacter hormaechei subsp. xiangfangensis strain 34399 plasmid p34399-121.660kb, complete sequence 40894-40925 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP030078 Enterobacter hormaechei strain 20710 plasmid p4-20710, complete sequence 2056-2087 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP029247 Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_F, complete sequence 2047-2078 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP048417 Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence 2047-2078 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP042573 Enterobacter hormaechei strain E5 plasmid pE5_002, complete sequence 2047-2078 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP027605 UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed1, complete sequence 48296-48327 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP051133 Enterobacter hormaechei strain AMS-38 plasmid pAMS-38a, complete sequence 19434-19465 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP014995 Salmonella enterica subsp. enterica serovar Tennessee strain CFSAN001387 plasmid, complete sequence 66354-66385 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP053193 Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37c, complete sequence 2056-2087 9 0.719
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP023068 Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence 72958-72989 9 0.719
NZ_CP048359_4 4.2|1064678|32|NZ_CP048359|PILER-CR,CRT 1064678-1064709 32 NZ_CP040723 Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence 35740-35771 9 0.719
NZ_CP048359_4 4.6|1064922|32|NZ_CP048359|CRT 1064922-1064953 32 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 141278-141309 9 0.719
NZ_CP048359_4 4.8|1064678|34|NZ_CP048359|CRISPRCasFinder 1064678-1064711 34 NZ_CP040723 Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence 35740-35773 9 0.735
NZ_CP048359_3 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT 1036139-1036170 32 NZ_CP016452 Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence 1979379-1979410 10 0.688
NZ_CP048359_4 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT 1064617-1064648 32 MK448679 Streptococcus phage Javan137, complete genome 5204-5235 10 0.688

1. spacer 6.1|2933797|40|NZ_CP048359|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 8.1|4063878|42|NZ_CP048359|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcacacgcagataaatccaactttcaatattgttaagttc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
******************************************

3. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

4. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

5. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

6. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

7. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

8. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

9. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

10. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

11. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

12. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

13. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

14. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

15. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

16. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

17. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

18. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

19. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

20. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

21. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

22. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

23. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

24. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

25. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

26. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

27. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

28. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

29. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

30. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

31. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

32. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

33. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

34. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

35. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

36. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

37. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

38. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

39. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

40. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

41. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

42. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

43. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

44. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

45. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

46. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

47. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

48. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

49. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

50. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

51. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

52. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

53. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

54. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

55. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

56. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

57. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

58. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

59. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

60. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

61. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

62. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

63. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

64. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

65. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

66. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

67. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

68. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

69. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

70. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

71. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

72. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

73. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

74. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

75. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

76. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

77. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

78. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

79. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

80. spacer 8.2|4063937|40|NZ_CP048359|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.975

catggcgtagcaaaaagaaattttcaatattgctttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********** *****************************

81. spacer 5.1|2213527|38|NZ_CP048359|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

82. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

83. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

84. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

85. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

86. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

87. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

88. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

89. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

90. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

91. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

92. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

93. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

94. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

95. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

96. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

97. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

98. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

99. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

100. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

101. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

102. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

103. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

104. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

105. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

106. spacer 9.1|4849433|33|NZ_CP048359|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

107. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccaccctc	Protospacer
***************************************..

108. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

109. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

110. spacer 9.2|4849489|41|NZ_CP048359|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

111. spacer 4.6|1064922|32|NZ_CP048359|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 3, identity: 0.906

ggcgcactggatgcgatgatggatatcactta	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
*.*********************.*******.

112. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038598 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

113. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033827 (Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

114. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029125 (Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

115. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019693 (Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

116. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030192 (Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

117. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039274 (Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

118. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016528 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

119. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030227 (Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

120. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NC_013090 (Endophytic bacterium LOB-07 plasmid pLK39, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

121. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030009 (Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

122. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011606 (Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

123. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044113 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***    

124. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
aacgccttcgacgttgcggatcacgttctcct	Protospacer
 ..********* *************. **.*

125. spacer 4.6|1064922|32|NZ_CP048359|CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcgcactggatgcgatgatggat-atcactta	CRISPR spacer
ggcgcactggctgcgatgaaggacgatcaacc-	Protospacer
********** ******** ***. **** .. 

126. spacer 3.4|1035773|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NC_019341 (Pseudomonas syringae plasmid pNCPPB880-40, complete sequence) position: , mismatch: 8, identity: 0.75

aaaagggccgcattgacggccctgtgttatcg	CRISPR spacer
aaaagggccgcattagcggcccttttaatttg	Protospacer
**************..******* *    *.*

127. spacer 3.6|1035895|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to AB452989 (Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds) position: , mismatch: 8, identity: 0.75

gggtggcggtggtgctgtaattcacaccggta	CRISPR spacer
ggcgcgtggtggtgctgttgttcacaccggcc	Protospacer
**   *.*********** .**********. 

128. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 8, identity: 0.75

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
cgcctggtcgactttgccgatcacgtcgtccg	Protospacer
**. .  ********** ************. 

129. spacer 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  * 

130. spacer 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  * 

131. spacer 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  * 

132. spacer 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  * 

133. spacer 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  * 

134. spacer 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  * 

135. spacer 4.2|1064678|32|NZ_CP048359|PILER-CR,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
catcatcctcccgcagatgcgctggccgatcc	Protospacer
  *.*.* .******** ******** *****

136. spacer 4.4|1064800|32|NZ_CP048359|PILER-CR,CRT matches to MK448454 (Streptococcus satellite phage Javan361, complete genome) position: , mismatch: 8, identity: 0.75

tccgtttggtccaccaaatgtttgatgcttca	CRISPR spacer
tcttatcaatccaccaaatttttgattcttca	Protospacer
**.  *...********** ****** *****

137. spacer 4.6|1064922|32|NZ_CP048359|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcactggatgcgatgatggata---tcactta	CRISPR spacer
ggcgcactggaagcggtgatggaggggcgcac---	Protospacer
*********** ***.******* .    ***   

138. spacer 3.1|1035590|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NC_019911 (Yersinia phage phi80-18 complete genome) position: , mismatch: 9, identity: 0.719

cgcaacatcgccagatttgtcgtaggaaagca	CRISPR spacer
cgcaacatcgccatatatgtcgttaggtactc	Protospacer
************* ** ****** .*. * . 

139. spacer 3.1|1035590|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NC_047805 (Yersinia phage fHe-Yen3-01, complete genome) position: , mismatch: 9, identity: 0.719

cgcaacatcgccagatttgtcgtaggaaagca	CRISPR spacer
cgcaacatcgccatatatgtcgttaggtactc	Protospacer
************* ** ****** .*. * . 

140. spacer 3.8|1036017|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to KT588075 (Acinetobacter phage Ab105-2phi, complete genome) position: , mismatch: 9, identity: 0.719

actggttctgtaacccaaatttgggatcattc	CRISPR spacer
ggaggttctgtatcccaaaattgggatgggta	Protospacer
.  ********* ****** ******* . * 

141. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX015668 (Enterobacter cloacae strain CY01 plasmid pCY-CTX, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

142. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033346 (Salmonella enterica subsp. enterica serovar Tennessee strain CFSAN076210 plasmid pCFSAN076210, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

143. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010386 (Enterobacter hormaechei subsp. xiangfangensis strain 34399 plasmid p34399-121.660kb, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

144. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030078 (Enterobacter hormaechei strain 20710 plasmid p4-20710, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

145. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029247 (Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_F, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

146. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048417 (Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

147. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042573 (Enterobacter hormaechei strain E5 plasmid pE5_002, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

148. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027605 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

149. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051133 (Enterobacter hormaechei strain AMS-38 plasmid pAMS-38a, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

150. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014995 (Salmonella enterica subsp. enterica serovar Tennessee strain CFSAN001387 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

151. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053193 (Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37c, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
ggctttgacgacattgcggatcacgtcgtttt	Protospacer
 *. ..  **** ****************.**

152. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
agcgagccggacttcgcggatcacgccgtctt	Protospacer
 *.*  .. *****.**********.******

153. spacer 4.2|1064678|32|NZ_CP048359|PILER-CR,CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
cgagaccgcctcgccgaggcgctggcagcgac	Protospacer
    ******.*** *************   *

154. spacer 4.6|1064922|32|NZ_CP048359|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgcactggatgcgatgatggatatcactta	CRISPR spacer
ggcgcactggaaccgatgatggatgcgatgag	Protospacer
***********  ***********.. *.  .

155. spacer 4.8|1064678|34|NZ_CP048359|CRISPRCasFinder matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.735

gtttaccgccccgcagaggcgctggcag-atccgt	CRISPR spacer
cgagaccgcctcgccgaggcgctggcagcgaccg-	Protospacer
    ******.*** ************* . *** 

156. spacer 3.10|1036139|32|NZ_CP048359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgtgccttcgactttgcggatcacgtcgtctt	CRISPR spacer
gccgtcttcgcctttgccgatcacgtcgagcc	Protospacer
  .*.***** ****** **********  ..

157. spacer 4.1|1064617|32|NZ_CP048359|PILER-CR,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 10, identity: 0.688

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
gatggatatttccacaacaagtaattttttgg	Protospacer
. *. ******** ****.*********  . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1081276 : 1088416 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_2 1159907 : 1167375 6 Escherichia_phage(66.67%) integrase,transposase attL 1150791:1150804|attR 1167685:1167698
DBSCAN-SWA_3 1670874 : 1680316 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_4 1771295 : 1777972 7 Enterobacteria_phage(57.14%) NA NA
DBSCAN-SWA_5 1783860 : 1792025 7 Ostreococcus_lucimarinus_virus(16.67%) transposase NA
DBSCAN-SWA_6 2286980 : 2351553 72 Enterobacteria_phage(39.22%) tail,transposase,terminase,protease,integrase,portal,lysis attL 2299161:2299176|attR 2337908:2337923
DBSCAN-SWA_7 2645702 : 2707750 81 Cronobacter_phage(26.32%) tail,transposase,terminase,protease,holin,integrase,head attL 2662055:2662069|attR 2708354:2708368
DBSCAN-SWA_8 3208785 : 3254027 61 Enterobacteria_phage(54.72%) tail,transposase,capsid,terminase,portal,integrase,lysis,head attL 3217090:3217105|attR 3262997:3263012
DBSCAN-SWA_9 3805078 : 3853368 35 Cronobacter_phage(25.0%) integrase,transposase,plate attL 3820029:3820044|attR 3839658:3839673
DBSCAN-SWA_10 4821671 : 4848620 26 Virus_Rctr41k(33.33%) integrase,transposase,tRNA attL 4815003:4815017|attR 4850770:4850784
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP048360
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 77307 : 104226 28 Salmonella_phage(37.5%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage