CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048404	Proteus mirabilis strain N18-00201 chromosome, complete genome	3 crisprs	c2c9_V-U4,cas3,DEDDh,DinG,RT,csa3,TnsE_C	0	2	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048404_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048404_1

178856-178951

Orphan

Consensus_repeat	Method
ATAGCTTAGAAAAATAAGTACTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048404_1

>merge|NZ_CP048404|1|178856-178951|CRISPRCasFinder
ATAGCTTAGAAAAATAAGTACTAATATATTTTAAAAGATAAAACAGAATATAAGTTTATTATCTTGAAATAGATAGCTTAGAAAAATAAGTGCTAA

>NZ_CP048404|1|1|178856-178951|CRISPRCasFinder
ATAGCTTAGAAAAATAAGTACTAA	TATATTTTAAAAGATAAAACAGAATATAAGTTTATTATCTTGAAATAG
ATAGCTTAGAAAAATAAGTGCTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048404.1\|WP_036920151.1\|167651_169184_-\|YifB-family-Mg-chelatase-like-AAA-ATPase	unknown	unknown	gnl\|CDD\|182120
NZ_CP048404.1\|WP_004246349.1\|189564_190695_+\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NZ_CP048404.1\|WP_004249676.1\|172794_174645_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_CP048404.1\|WP_004246362.1\|176208_177096_-\|HTH-type-transcriptional-activator-IlvY	unknown	unknown	gnl\|CDD\|236961
NZ_CP048404.1\|WP_017827031.1\|169629_169731_+\|ilv-operon-leader-peptide	unknown	unknown	gnl\|CDD\|170429
NZ_CP048404.1\|WP_020946582.1\|167265_167604_+\|DUF413-domain-containing-protein	unknown	unknown	gnl\|CDD\|236825
NZ_CP048404.1\|WP_004246357.1\|181789_183298_-\|guanosine-5'-triphosphate,3'-diphosphate-diphosphatase	unknown	unknown	gnl\|CDD\|236826
NZ_CP048404.1\|WP_004246355.1\|184719_185046_+\|thioredoxin-TrxA	unknown	unknown	gnl\|CDD\|181812
NZ_CP048404.1\|WP_004246363.1\|174648_176223_+\|threonine-ammonia-lyase,-biosynthetic	unknown	unknown	gnl\|CDD\|236417
NZ_CP048404.1\|WP_004249675.1\|177268_178744_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235368
NZ_CP048404.1\|WP_004246352.1\|187261_188353_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	unknown	unknown	gnl\|CDD\|237913
NZ_CP048404.1\|WP_004253075.1\|179272_179521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048404.1\|WP_004246366.1\|171506_171785_+\|acetolactate-synthase-2-small-subunit	unknown	unknown	gnl\|CDD\|236862
NZ_CP048404.1\|WP_004246365.1\|171795_172722_+\|branched-chain-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|235841
NZ_CP048404.1\|WP_004246360.1\|179002_179272_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	unknown	unknown	gnl\|CDD\|379750
NZ_CP048404.1\|WP_004246367.1\|169860_171510_+\|acetolactate-synthase-2-catalytic-subunit	unknown	unknown	gnl\|CDD\|181601
NZ_CP048404.1\|WP_004246354.1\|185607_186867_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP048404.1\|WP_004249670.1\|188376_189435_+\|ECA-polysaccharide-chain-length-modulation-protein	unknown	unknown	gnl\|CDD\|236943
NZ_CP048404.1\|WP_004246356.1\|183301_184600_-\|ATP-dependent-RNA-helicase-RhlB	unknown	unknown	gnl\|CDD\|235314
NZ_CP048404.1\|WP_004249673.1\|179693_181715_+\|DNA-helicase-Rep	unknown	unknown	gnl\|CDD\|182838

Protein	Function_ID	Function_description	E-value
NZ_CP048404.1\|WP_036920151.1\|167651_169184_-\|YifB-family-Mg-chelatase-like-AAA-ATPase	gnl\|CDD\|182120	PRK09862, PRK09862, ATP-dependent protease.	0
NZ_CP048404.1\|WP_004246349.1\|189564_190695_+\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP048404.1\|WP_004249676.1\|172794_174645_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP048404.1\|WP_004246362.1\|176208_177096_-\|HTH-type-transcriptional-activator-IlvY	gnl\|CDD\|236961	PRK11716, PRK11716, HTH-type transcriptional activator IlvY.	0
NZ_CP048404.1\|WP_017827031.1\|169629_169731_+\|ilv-operon-leader-peptide	gnl\|CDD\|170429	PRK10424, PRK10424, ilv operon leader peptide.	0.00197669
NZ_CP048404.1\|WP_020946582.1\|167265_167604_+\|DUF413-domain-containing-protein	gnl\|CDD\|236825	PRK11027, PRK11027, hypothetical protein; Provisional.	4.02914e-70
NZ_CP048404.1\|WP_004246357.1\|181789_183298_-\|guanosine-5'-triphosphate,3'-diphosphate-diphosphatase	gnl\|CDD\|236826	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase.	0
NZ_CP048404.1\|WP_004246355.1\|184719_185046_+\|thioredoxin-TrxA	gnl\|CDD\|181812	PRK09381, trxA, thioredoxin TrxA.	1.85797e-62
NZ_CP048404.1\|WP_004246363.1\|174648_176223_+\|threonine-ammonia-lyase,-biosynthetic	gnl\|CDD\|236417	PRK09224, PRK09224, threonine ammonia-lyase IlvA.	0
NZ_CP048404.1\|WP_004249675.1\|177268_178744_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235368	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated.	0
NZ_CP048404.1\|WP_004246352.1\|187261_188353_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	gnl\|CDD\|237913	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase.	0
NZ_CP048404.1\|WP_004246366.1\|171506_171785_+\|acetolactate-synthase-2-small-subunit	gnl\|CDD\|236862	PRK11152, ilvM, acetolactate synthase 2 small subunit.	3.08752e-35
NZ_CP048404.1\|WP_004246365.1\|171795_172722_+\|branched-chain-amino-acid-transaminase	gnl\|CDD\|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	0
NZ_CP048404.1\|WP_004246360.1\|179002_179272_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	1.15858e-41
NZ_CP048404.1\|WP_004246367.1\|169860_171510_+\|acetolactate-synthase-2-catalytic-subunit	gnl\|CDD\|181601	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed.	0
NZ_CP048404.1\|WP_004246354.1\|185607_186867_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP048404.1\|WP_004249670.1\|188376_189435_+\|ECA-polysaccharide-chain-length-modulation-protein	gnl\|CDD\|236943	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein.	0
NZ_CP048404.1\|WP_004246356.1\|183301_184600_-\|ATP-dependent-RNA-helicase-RhlB	gnl\|CDD\|235314	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional.	0
NZ_CP048404.1\|WP_004249673.1\|179693_181715_+\|DNA-helicase-Rep	gnl\|CDD\|182838	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional.	0

>NZ_CP048404.1|WP_004249675.1|177268_178744_+|ketol-acid-reductoisomerase
MANYFNTLNLRQQLSQLGKCRFMSRDEFADEANYLKGKKVVIVGCGAQGLNQGLNMRDSGLDIAYALRQEAIDEKRASWRRATENGFEVGTYEALIPQADLVVNLTPDKQHSAVVQAVQPLMKSGAALGYSHGFNIVEVGEKIRDDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDAKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCYDKMVAEGVEPGYAGKLIQFGWETITEALKQGGITLMMDRLSNPAKMRAYALSEQLKEIMAPLFAKHMDDIISGKFSETMMADWANDDKNLLTWREETGASAFENYPEYEGKISEQEYFDHGVLMVAMVKAGVELAFDTMIEAGIIAESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYGNYLFSFAAVPMLKEFMTRLQSGDLAKHVPDSGTDNAQLRDINEAIRQHPIEIVGKKLRGYMTDMKKIAVAN
>NZ_CP048404.1|WP_004246362.1|176208_177096_-|HTH-type-transcriptional-activator-IlvY
MDIRDLKLFLHLAESCHFTKTAQAMHVSPSTLSRQIQRLEEQLGHPLFLRDNRQVTLTDAGEQLKRYAQHTLLQYKQLKHTLNQNSPSLSGELRLFCSVTAAYSHLPPILDRFRAENPLVEIKLTTGDAADAVDKVISDEADLGIAGKPEKLPENICFEKIGEIPLVLIAPALPGNVRHLATQEKPDWLNIPFIIPEHGPSRQRIALWFKRHRIQNPLIYATVSGHEAIVSMVALGCGIALIPQVVVDNCPEPVRNRISLLDNISLVEPFELGVCGLHKRLQEPVISAFWRLLHH
>NZ_CP048404.1|WP_004246363.1|174648_176223_+|threonine-ammonia-lyase,-biosynthetic
MAAFRPLTSAPSSAEYLKAALSAPVYEAAVVTPLQEMAKISQRLENTILVKREDRQPVHSFKLRGAYNMIAGLTPEQKAKGVVTASAGNHAQGVALSANRMGVKALIVMPIATADIKVDAVRQFGGEALLYGANFDEAKAKAIALAKEMGYTFVPPFDHPAVIAGQATLAMELLQQDVHLDRIFVPVGGGGLIAGVAVLIKQLMPEIKIIGVEAEDAACLKAALEAGHPVELPRVGLFAEGVAVKRIGDETFRLCQKYVDDVITVDSDAICAAVKDLFEDVRAIAEPSGALALAGLKKYVEEHQIKGERLAHVLSGANVNFHGLRYVSERCELGEKREALFAVTIPEQKGSFLRFCQILGQRVVTEFNYRYSDADPENARIFVGVRLSQGLQERKEIVQQLTEAGYQVSDLSDDEMAKLHVRYMVGGRPNQPLKERLFSFEFPEAPGALMKFLKTLGTYWNITLFHYRSHGTDYGRVLVAFELPETEGRFERHLDALGYEYHDETGNPSFQLFLSPQTASLVVE
>NZ_CP048404.1|WP_004249676.1|172794_174645_+|dihydroxy-acid-dehydratase
MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQLIKLDLVDAMIQGANPNVSDADSEQIERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKTLFINAGKRIVELTKRYYEQDDLSALPRNIAKKEAFENAMILDIAMGGSTNTVLHLLAAAQEGDVDFKMEDIDRLSRQVPHLCKVAPSTQKYHMEDVHRAGGVMGILGELDRAGLLNRNVNNILGLSLPETLAQYDVMLSQDEQVKSMYQAGPAGIRTTKAFSQDCRWPTLDTDREQGCIRSKAHAYSQDGGLAVLSGNLAQDGCIVKTAGVDEDNLVFSGPAKVYESQDDAVEAILGGKVVAGDVVIIRYEGPKGGPGMQEMLYPTSYLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAANGGIIGLVEEGDIVDINIPNREINLRVDEKTLAARREAQLARGDKAWTPKDRQRQVSFALRAYASLATSADKGAVRDKSKLGG
>NZ_CP048404.1|WP_004246365.1|171795_172722_+|branched-chain-amino-acid-transaminase
MTKQADYIWFNGEMVPWAEAKVHVMSHALHYGTSVFEGVRCYDSHKGPVVFRHREHMQRLHDSAKIYRMPVAQSVDELMEACRETLRKNQLVSAYIRPLVFIGDVGMGVNPPEGYKTDIIIAAFPWGAYLGEEALDKGIDAMVSSWHRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVHGYLSEGAGENLFEVKDGVIFTPPFTSSALPGITRDAIIKLAKDLGYEIREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGIGRCGPVTKAIQKAFFGLFTGETEDKYGWLDPVNP
>NZ_CP048404.1|WP_004246366.1|171506_171785_+|acetolactate-synthase-2-small-subunit
MNQHNITIEARFCPEILERILRVIRHRGFHICSMNMNITESNYINLALTVSSQRPVDLLCSQLTKLADVAGIQVLHQQQKEKLQFISALSAM
>NZ_CP048404.1|WP_004246367.1|169860_171510_+|acetolactate-synthase-2-catalytic-subunit
MNGAQWLVQALRKQRVETVFGYPGGAIMPVYDALYDGGVEHVLCRHEQGAAIAAIGFARSTGTTGVCIATSGPGATNVITGLADALLDSVPVVAITGQVASNLIGTDAFQEVDVLGLSLACTKHSFLVSDVNELPRVVSEAFSIAKQGRPGPVLIDITKDVQLADASHLADYPLPQEQEFPYPEHEIAQALQMLAQAKKPILYVGGGVAMSQGVEALRSFVKQTQIPVVSTLKGLGCANAFDANYLGMLGMHGTKAANYAVQRSDLLIAVGARFDDRVTGRLNTFAPNAKVIHIDIDYAELNKLKQAHIALLGDAKVLLPKLSQPLAIEAWQEEVQQLIAEYAWRYDHPGEAIYAPLLLKQLSDAKPENSIVTTDVGQHQMWSAQHMTFDAPENFITSSGLGTMGFGIPAAIGAQIARPDACVICVSGDGSFMMNVQELGTIKRKQLPIKLVLLDNQRLGMVRQWQELFFEQRYSETILTDNPDFVALAKAFDIPGQRITEKAQVAEAIKCLLTSDGPYLLQVSIDDAENVWPLVPPGASNDEMMEKSK
>NZ_CP048404.1|WP_017827031.1|169629_169731_+|ilv-operon-leader-peptide
MNTIVLVISLIIVSVVVIINPLCGAALGRRKAN
>NZ_CP048404.1|WP_036920151.1|167651_169184_-|YifB-family-Mg-chelatase-like-AAA-ATPase
MALAVIYTRASLGISAPLITIEAHISQGLPGLTLVGLPETVVKEAKDRVRSALINSGYSYPAKRITINLSPADLPKEGARYDLPIALAILIASEQLISDKLNSYEFIGELALSGKLQKVNAVIPSILSANKDNRISIISIEHQSEVSLLPNKSALLASHLLDICHHLENNTPLIEAKNNINHKTIENQNNKDISDIIGQNNAKRAAEITAAGNHNILFLGPPGTGKTMLAQRINTLLPPLTAKEALDVLIISSLSNTIHHDGKWPLRPFRAPHHTASAVALTGGGSIPKPGEITLAHHGILFLDELPEFDRRVLDALREPLDARKITISRAKAKISYPANVLLVGALNPSPTGHYQGTHNRTPVKQVLRYLSKVSGPFLDRFDLSVEMPLLPQGALLQSTHTNESSSIIRARVLQARERQFQRSGKLNTYLSSKEIEHFCQLHTEDALFLEETLNKLGLSIRAWHKILRVSRTIADLENEQKIQRNHLIEALSFRAMDRLMIYLQKQLEG
>NZ_CP048404.1|WP_020946582.1|167265_167604_+|DUF413-domain-containing-protein
MAESFITTNRFFDNKHYPRGFSRHGDFTIKEAQILERHGQAFNELDLGKREPVTEAEKLFVAMCRGEREAATVEEKIWKKYTSRISRPKRFHTLSGGKPQLDPSDDYTDSDD
>NZ_CP048404.1|WP_004246360.1|179002_179272_-|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family
MRKVSYSGQFKKDLKLAEKRGKDINKLKEIILLLVQGKRLPAQLKDHPLTGNWKPRRDLHIEPDWLLIYKIDNDTVHFDRTGSHSDLFK
>NZ_CP048404.1|WP_004253075.1|179272_179521_-|hypothetical-protein
MSIKSELIATKVDIELKEAFVAIARNKHRPASQILRDLIRVYVESNQTQPNEKTLNTFAKTDKGDDVFYAEDAHDLFKKLDI
>NZ_CP048404.1|WP_004249673.1|179693_181715_+|DNA-helicase-Rep
MRLNPGQQKAVEYVSGPCLVLAGAGSGKTRVITNKIAYLIRQCRYSAKQIAAVTFTNKAAREMKERVAQTLGKQEAKGLMISTFHTLGLEIIKREYKALGIKSNFSLFDDQDQSALLKELTVDLLEEDKDLLSQLKSQISNWKNDMLTPEQVIGRAQSQQDHTFAECFRRYEQHLLSCNVLDFDDLISKPTLLLRTNEEVRARWQQRIRYLLVDEYQDTNTSQYELVKWLVGERARFTVVGDDDQSIYSWRGARPQNLVLLQKDFPQLNVIKLEQNYRSSGRILKSANILIENNPHVFEKRLFSELGYGDELRVLTANNEEHEAERVAGELIAHHFINKTNYKDYAILYRGNHQSRIFEKYLMQNRIPYRISGETSFFSREEIKDILAYLRVITNPDDDAAFLRIVNKPRREIGPMTIQKLGEWAKVRDKSLFNACFDLGLSQTLTGRGLSALQAFSQWMARIVQQSEREPLLAVRDLLHEMDYESWLYETSSSAKAAEMRMKNINQLFSWMSEMLEGDELHEPMTLSQVVNRFTLRDMMERGETDEELDQVQLMTLHASKGLEFPHVFLVGMEEGILPHQSSIDEDNVEEERRLAYVGITRAQKTLTFTLCKERRQYGELIRPEPSRFLYELPQDDLHWDTNKKKVLSAQEKQEKGQKGVAGLKAMLARHKP
>NZ_CP048404.1|WP_004246357.1|181789_183298_-|guanosine-5'-triphosphate,3'-diphosphate-diphosphatase
MLKSSSLYAAIDLGSNSFHMLVVREIAGSIQVLSRVKRKVRLAAGLNKENELSEQAMERGWQCLRLFSEYLRDIPAEQIRVVATATLRIAKNADIFVAKASEILGNTVHVISGEEEARLIYRGVAHTTGGAEQRLVVDIGGGSTELVTGTGAKTTQLMSLSMGCVTWLERYFSDRSLTEENFAQAQQAAKAILAPVAEKLIQQGWQVCVGASGTVQALQEIMIAQGMDELITLPKLERLKQKAIECGKLEELEIEGLTFERALVFPSGLAILIAIFETLHIENMILAGGALREGLVYGMLHLPIEQDIRQRTLRNIQRRFQIDIEQAHRVQQLAEHFFIQVSKSWQLDNRCRELLSSACALHEIGLSVDFRQAPSHASYLVSHLDLPGYTPAQRRLIASFLRNQKGIIDLAPLNQQNALPINQAYRLVRLLRLAIIFASRRRDDTLPALRLRTEDEKLIITLPHQWIAEHPLRAENLHEEIQLQSYVHWPLMLEEQNNSRIG
>NZ_CP048404.1|WP_004246356.1|183301_184600_-|ATP-dependent-RNA-helicase-RhlB
MSKTYLTEKKFSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGHDIAGQAQTGTGKTLAFLTSTFHYLLTHPAKEGHEKNQPRALIMAPTRELAVQIYTDAQPLAQSTGVKMGLAYGGDGYDEQLKVLNNGVDIVIGTTGRLIDYVKQGHINLNAIQVVVLDEADRMYDLGFIKDIRWLFRRMPNAAERMNMLFSATLSYRVRELAFEQMNNPEYVEVEPEQKTGFSIKEELFYPSNEEKMRLLQTLIEEEWPERCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVPQKKRLRILEDFTQGNIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGKSGNSISLACEEYALNLPAIETYIQHAIPVSKYNSDALLTDLPEPKRRHRPRQGQPRRNNSAPRRGNNTQRNNRNKRPSHS
>NZ_CP048404.1|WP_004246355.1|184719_185046_+|thioredoxin-TrxA
MSDKILHLSDNTFDVDVLQATGPVLVDFWAEWCGPCKMIAPILDEVATEYAGKLTVAKLNIDENPATAPKYGIRGIPTLILFKNGAVAATKVGALSKTQLKEFLDENI
>NZ_CP048404.1|WP_004246354.1|185607_186867_+|transcription-termination-factor-Rho
MNLTELKNTPVSELIALGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKEGERYFALLKVNEVNFDKPENARSKILFENLTPLHANNRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPPKAGKTMLLQNIAANIAHNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTSQDELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNEEFFDFMKRS
>NZ_CP048404.1|WP_004246352.1|187261_188353_+|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase
MDILKMSTNVFYVFLFSFAFLFVARKVAKKIGLVDKPNYRKRHHGLIPLVGGISVYFGIVFAFYVSDIYIPHKELYLICAGILVFIGALDDRYDISVKIRATIQALVGIAMMVFGGLKLESLGHAFGPWDMHLGPFGYIVTLFAVWAAINAFNMVDGIDGLLGGLSCVSFGALGILLYQSGSSALAFWCFSFIAAILPYIMLNLGVCGKKFKVFMGDAGSTLIGFTIIWLLISSTQVDPHPINAVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTPRQAFVLITLAAAVLAAIGIIGENLSFVPEWVMLALFLLAFVMYGYCIKRAWRVARFIKRYKRRLRKATQLKH
>NZ_CP048404.1|WP_004249670.1|188376_189435_+|ECA-polysaccharide-chain-length-modulation-protein
MNSENNVSRQGFSPDNELDIRGLCCALWSGKRWIIGFALLFALIALGASYLMQPKWSAIAMTERPTVNNLGSYYSQSQFLRNLDTQINPSVTVSQLSIPDEAYQEFVTQISAFDTRREFWLQTDYYKQRKENDAQADAALLDELINNIQFTPADEKKLVNDQLKLIAETANDSSQLLNEYIAFANKRAAEHLNEEVIAAWATRTQSMKALVKRQEMAAQAAYQRQINLLKQSIKVAEKQGISQKQTSIAIDELPDSKLFLLGVPLLQSQLETLMATGPDFDSDYDQNTAMLSTLAVGAKLQDNFQTYRFLRTPEDPVKRDSPRRAFMMVLWGAIGVLVGAGVALVRRSSLKK
>NZ_CP048404.1|WP_004246349.1|189564_190695_+|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKVLTVFGTRPEAIKMAPLVHALANDDSFEAKVCVTAQHREMLDQVLNLFEIKPDYDLNIMKPGQDLTDITCRILEGLKPVLASFQPDVVLVHGDTTTTMAASLAAFYQQIPVGHVEAGLRTGNLYSPWPEEANRTIAGHLAMYHFAPTETAKLNLVREAVADKNIFVTGNTVIDALFWVSERVMGNQTLLDELAVQYPFIQPERKMILVTGHRRESFGGGFERICQALAEIALAHPDVEVVYPVHLNPNVSEPVKRILHGINNIKLIQPQDYLPFVYLMNHAYLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVEAGSVRLVGTDTKRIVSEVTSLLTDENAYHQMSKATNPYGDGHACQRILEALKNNQVTL

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Crispr_ID: NZ_CP048404_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048404_2

2699587-2699729

Orphan

Consensus_repeat	Method
GGTGATATCAATTTCACAGGTGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP048404_2

>merge|NZ_CP048404|2|2699587-2699729|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGGTGGCGCTGGTAATGTCATTAAATCTGATGTTACACAAGGTGATATCAATTTTACAGGTGGCGGCATAGCAAATGTAATAAAACATAACTCTAATTATGGTAATACCAACTTTACTGGTGG

>NZ_CP048404|2|2|2699587-2699729|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGG	TGGCGCTGGTAATGTCATTAAATCTGATGTTACACAA
GGTGATATCAATTTTACAGGTGG	CGGCATAGCAAATGTAATAAAACATAACTCTAATTAT
GGTAATACCAACTTTACTGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048404.1\|WP_112842924.1\|2720914_2722018_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|236694
NZ_CP048404.1\|WP_046334654.1\|2697671_2697899_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048404.1\|WP_004250354.1\|2724108_2724861_+\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|235389
NZ_CP048404.1\|WP_004248539.1\|2692759_2693620_-\|small-conductance-mechanosensitive-channel-MscS	unknown	unknown	gnl\|CDD\|182386
NZ_CP048404.1\|WP_060555640.1\|2723491_2724106_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP048404.1\|WP_112842923.1\|2722014_2723214_+\|transporter	unknown	unknown	gnl\|CDD\|182559
NZ_CP048404.1\|WP_004244077.1\|2712179_2713607_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP048404.1\|WP_036971246.1\|2720372_2720816_+\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP048404.1\|WP_004244059.1\|2688137_2689037_+\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NZ_CP048404.1\|WP_110229414.1\|2694253_2696851_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP048404.1\|WP_036905140.1\|2691967_2692591_-\|arginine-exporter-ArgO	unknown	unknown	gnl\|CDD\|236463
NZ_CP048404.1\|WP_049197544.1\|2718522_2719293_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP048404.1\|WP_049220917.1\|2690199_2690919_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048404.1\|WP_049197516.1\|2719619_2720162_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP048404.1\|WP_163806788.1\|2689225_2690203_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP048404.1\|WP_004244066.1\|2693711_2694083_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP048404.1\|WP_017827184.1\|2713808_2715680_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP048404.1\|WP_004244080.1\|2715692_2718359_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP048404.1\|WP_004244058.1\|2687320_2687977_-\|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl\|CDD\|234816
NZ_CP048404.1\|WP_004248538.1\|2691142_2691877_-\|oxidative-stress-defense-protein	unknown	unknown	gnl\|CDD\|236840

Protein	Function_ID	Function_description	E-value
NZ_CP048404.1\|WP_112842924.1\|2720914_2722018_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	2.02199e-179
NZ_CP048404.1\|WP_004250354.1\|2724108_2724861_+\|cell-division-protein-ZapD	gnl\|CDD\|235389	PRK05287, PRK05287, cell division protein ZapD.	1.19728e-117
NZ_CP048404.1\|WP_004248539.1\|2692759_2693620_-\|small-conductance-mechanosensitive-channel-MscS	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	6.51737e-120
NZ_CP048404.1\|WP_060555640.1\|2723491_2724106_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.63102e-90
NZ_CP048404.1\|WP_004244077.1\|2712179_2713607_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP048404.1\|WP_036971246.1\|2720372_2720816_+\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	5.06138e-55
NZ_CP048404.1\|WP_004244059.1\|2688137_2689037_+\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	1.29397e-161
NZ_CP048404.1\|WP_110229414.1\|2694253_2696851_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP048404.1\|WP_036905140.1\|2691967_2692591_-\|arginine-exporter-ArgO	gnl\|CDD\|236463	PRK09304, PRK09304, arginine exporter ArgO.	4.13688e-119
NZ_CP048404.1\|WP_049197544.1\|2718522_2719293_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	4.16991e-168
NZ_CP048404.1\|WP_004248538.1\|2691142_2691877_-\|oxidative-stress-defense-protein	gnl\|CDD\|236840	PRK11087, PRK11087, oxidative stress defense protein; Provisional.	6.92322e-114
NZ_CP048404.1\|WP_049197516.1\|2719619_2720162_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	1.83996e-131
NZ_CP048404.1\|WP_163806788.1\|2689225_2690203_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	9.0621e-26
NZ_CP048404.1\|WP_004244066.1\|2693711_2694083_-\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	9.00597e-61
NZ_CP048404.1\|WP_017827184.1\|2713808_2715680_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP048404.1\|WP_112842923.1\|2722014_2723214_+\|transporter	gnl\|CDD\|182559	PRK10573, PRK10573, protein transport protein HofC.	6.51728e-108
NZ_CP048404.1\|WP_004244058.1\|2687320_2687977_-\|ribose-5-phosphate-isomerase-RpiA	gnl\|CDD\|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	5.44811e-141
NZ_CP048404.1\|WP_004244080.1\|2715692_2718359_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0

>NZ_CP048404.1|WP_046334654.1|2697671_2697899_+|hypothetical-protein
MNHIPASGFIYMASIIKSMLENPCINKEFEKLIAADLLPILQNKTNMTENFTALHLIKKTSNRRIILKKNLFIIN
>NZ_CP048404.1|WP_110229414.1|2694253_2696851_-|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGVVPKPLDATQTAALVELLKSPPKGEEEFLLDLIVNRVPPGVDEAAYVKAGFLTALAKGETTSPLITPEKAVELLGTMQGGYNIHALIEALDNDKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNVYAKQIMQSWADGEWFTERPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGSVGPIKQIEALNQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKRGGGVVLGGKIAPIFFNTMEDAGALPIEVDVSKLNMGDVIDIYPYKGEIRNHETNELLETFALKTEVLIDEVRAGGRIPLIIGRGLTSKARSALGLPPSTLFRHAKAVEQSDRGFSLAQKMVGRACGRDGIRPGEYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVHAIPLYAIKEGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASAERSAAGCTIKLDKAPIIEYLQSNIVLLKWMIAEGYGDRRTLERRITAMENWLADPQLLEADADAEYAAVIEIDLNEIKEPILCAPNDPDDARLLSEVANSKIDEVFIGSCMTNIGHFRAAGKLLDQHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEVPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPEPQEYLDFINKVDETAEDTYRYLNFDQLEQYTDKATQVIFQTTV
>NZ_CP048404.1|WP_004244066.1|2693711_2694083_-|YacL-family-protein
MDYEFQRDLTGGILARFSMDHEAIGYWLNDEIQGDISLIDQILTEMDEVKGSEKQWQLIGKEYSLSIDDEEIMVRANTLHFETDDLEEGMSYYDNESIAFCGLDDFATMLQKYRLFILENRRS
>NZ_CP048404.1|WP_004248539.1|2692759_2693620_-|small-conductance-mechanosensitive-channel-MscS
MNELPASLDEATGWFVANQELFIQYAVNIVAAFLILFIGLFVAKMVSKGVARILTLRHIDATVVTFLSVLVRYTVIAFTLIAVLGRLGVQTASVIAVLGAAGLAVGLALQGSLSNFAAGVLIVIFRPIRAGEYVMIGAVEGTVRDVQIFSTTLRSADDRIIVIPNSKIISSEVINLSREPNRRTQIIVGVAYDADIDKVKKVLGDVVAQDKRIQHNQGVTIRLHEMAPSSLNFVVRVWTTNDDAWPVYWDLMENFKRALDANNIGIPFPQMDVYMHQAQNTVMKAE
>NZ_CP048404.1|WP_036905140.1|2691967_2692591_-|arginine-exporter-ArgO
MLTTFFQGFLLSAAMILPIGAQNAFVLQQGSKKQYHLMSAFLCALSDVILISGGVFGGSALLSQSEYLLLLITWGGVAFLLWYGWNAFKTAFTKEIELSQHKNQVKSRWRVIVTLVAVTWLNPHVYLDTFVVLGSIGGQLSAELRPWFTFGAVFASISWFFALSLLAAWFSPILSQMTAQRIINLFVGCVMWFIALQLAAQGWKNLF
>NZ_CP048404.1|WP_004248538.1|2691142_2691877_-|oxidative-stress-defense-protein
MKVKAMVLASMLALGAPSIALAGAVPEGPHITTSGNATIKATPDMATLNIQVSEKAKDAAQAKKQVDERVAKYFAFLKENGVTKEDIDAANIRTQPNYEYDKKAERSVINGYTATRTVDVKIKKLDQLNTLLDGALAAGLNEINNVEFGVNDPEQYKAKAREVAIKNAIQQASSVAKGFGADLGAVYSVSYRAPEATPYPIARMKMDAMALSAPSPEAVKETYQQQSIEFKDYVDVVFELKTAK
>NZ_CP048404.1|WP_049220917.1|2690199_2690919_-|hypothetical-protein
MKIKPLVEKEINRFEFGKIFTYRDLTPYLSNPETTVKAVSRLVKNGDIKRFAKGQFYRPKKGIFGEMQLSDTEKLKTFMYQNGKRKGYITGMGLYNRLGLTTQIPKTITIASDKSPQRKDLGTVEVKLVKAKVPVSESNREYLEILDVLSNIKKIPDSNPSEVMKVIAKKLKNIKKDGLYELINLASFYSPVTRALLGLLIENININLALELKKQLNPTTHYRIGLDSYWDNAEEWNIE
>NZ_CP048404.1|WP_163806788.1|2689225_2690203_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MNLHNNPDVFLELINRTAEYFKIPEVYVEKDYWVTHVLLQLSLSEFRNDFIFKGGTALSKVFGLIKRFSEDVDLAMFNNRGLSSNQIKKCMKAAEETIAAGLTYIQKPDESKGSQFRKVYYKFPRIVSGEFGHASDVILLETNSFTSPEPFSFMPTESLIAEFIKKAQIEGGNEIITRYGLEKFEVNVLDIKRTVAEKILGLASSEADPKQALADKIRHIYDLCMIKRNKHYSQFFDSDSLWKMMDIVIQADRDQFREAGQWLDLYIRVCFSPSLVKYGKVSGGFFTANFLNWFMTVIFPLMMKFSAYFPQWPVFCKNGLINKLW
>NZ_CP048404.1|WP_004244059.1|2688137_2689037_+|LysR-family-transcriptional-regulator-ArgP
MKRPDYRALQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPQPTEQGQKLLALLHQVEMLEEQWLGDENSGSTPLLLSLAVNADSLATWLLPALHPVLTQLPIRLNIQVEDETRTQERLRRGEVVGAISIQPQALPSCLVDQLGALDYLFVASPDFAQRYFANGVTKSSLLKAPAVAFDHLDDMHQAFLQQNFGLSPGSVPCHIVNSSEAFVQLAKQGSTCCMIPHLQIADELKSGELIDLTPGLCQRRMLYWHRFAPESRTMRKVTDALLDYGRKVLKQDEE
>NZ_CP048404.1|WP_004244058.1|2687320_2687977_-|ribose-5-phosphate-isomerase-RpiA
MTQDELKKAVGWAALEYVKPGTIVGVGTGSTASHFIDALATMKGQIEGAVSSSEASTAKLKSYGIPVFDCNEVDSLDIYVDGADEINHQMQMIKGGGAALTREKIIAAVAKTFVCIVDESKQVDVLGKFPLPVEVIPMARSYVARELVKLGGLPEYRENVVTDNGNVILDVYNLTILNPIELENKINSIAGVVTVGLFANRGADIVLMGTSEGVKTIK
>NZ_CP048404.1|WP_004244077.1|2712179_2713607_-|dihydrolipoyl-dehydrogenase
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVAKVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFTGSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
>NZ_CP048404.1|WP_017827184.1|2713808_2715680_-|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MSIEIKVPDIGADEVEVTEVMVKVGDRIEEEQSLITVEGDKASMEVPSPQAGIVKEIKIAVGDKVETGSLIMIFDTEEGAQAPAQEAAPAPSAAAPAASELKEVHVPDIGGDEVEVTEVMVNVGDTISEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVSTGSLIMVFEVAGSAPAPSASAPAPAASAPAASAIKDVNVPDIGGDEVEVTEVMVKVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVKTGSLIMTFEVAGAAPAAQAPAAPAASTSAAPAPSAPAKAPASAPAAKEEFVENEAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILREDVQSYVKELIKRAESAPANAGGGLPGMLPWPKVDFSKFGEIEEVELSRIQKISGANLSRNWVMIPHVNLFDEADITEVEEFRKQQNKEAEKKKLDVKITPLVFVMKAAAKALADMPRFNSSISEDGQKLILKKYINIGIAVDTPNGLVVPVFKDVNKKGILELSYELAEVSKKARAGKLTASDMQGGCFTISSLGGIGTTGFAPIVNAPEVAIMGLSRSSMKPVWNGKEFVPRLMLPMSLSFDHRVIDGADGARFITLINQYMSDLRRLVM
>NZ_CP048404.1|WP_004244080.1|2715692_2718359_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA
>NZ_CP048404.1|WP_049197544.1|2718522_2719293_-|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKASHARIIDAHDKGDIAAESDAVLQYQLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYTRKEMLTAVSEHRTQIYQAIINREPEVAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF
>NZ_CP048404.1|WP_049197516.1|2719619_2720162_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MEIKQGWLTGVKHVPSPNYDNRPEGEIPSLLIIHNISLPPGQFGGPYIDQLFTNTLAVDDHPFFNEIAHLRVSAHCLIRRDGEIVQYVPFTARAWHAGVSFYKGREKCNDFSIGIELEGTDECDFTSQQYQQLSTLTQQLIEHYPGIKENITGHSDVAPGRKTDPGPHFNWSYYRALLAK
>NZ_CP048404.1|WP_036971246.1|2720372_2720816_+|prepilin-peptidase-dependent-pilin
MNTLNYHSTENGFTLMELMIVIAIISILSSVAIPAYHGYIQKAALTDVLQTLSPYRSAVELCHYEHQYNQCHADASFMPQQFRSRYLTDIHVANGVISAKGKAQLEGLTIVMTPATNSKETLPQWQINCTSTNTALQTLCHKVFKSH
>NZ_CP048404.1|WP_112842924.1|2720914_2722018_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MNNTIHTATEFIEQLLRHSLAQRVSDLHLEPQQNSLRIRARIDNHLVLFSPPDNKLADEILTRLKILANINIAEKRLPQDGQFNWSYQKNNYSIRVATLPTLYGEKIVLRLMNNLQQPQLAQLGFQTIHLTLLKKYLTQPQGMILVTGPTGSGKTLTLYSCLQYLNKDNRNINSIEDPIELPLQGINQTQITEKAGITFATILRALLRQDPDVIMIGEIRDQQTAEIAIKAAQTGHLVLSTLHTNSTQATLARLANLGIAKDLIDSCVKLIISQRLVRCLCSNCKYPSPEQRNFIINNQQIILPNWQATGCQFCYSGYKGRTAIYDCFELAKQSLPSPYALFNSGIELIKKGITSLDEVYQVVGDIE
>NZ_CP048404.1|WP_112842923.1|2722014_2723214_+|transporter
MKLHFIYRYNALTYQGKWLSGNVVAQSKHEVIDQLIQQQKLPVKIRLYRVILFQNRDKQYRIQLLEQLALLLHSGLALLPALTLLKEECRYLHWQCVLNDIIFHLNQGGALSKQLSRYPLYFPANLTHFIYIGEESGKLDEVLLLQTTQLKNQRDLIKKIIKAFQYPLFLLLTLIVITISMLIYVLPEYQSLYSAFNTELPTLTLTLNRCSQWFSQYSLIILLFILIISYSYYTIKHHSAKFRDIEQRCWLNLPYLGILLRYHQLHIIFQIMTITQQAGLPLLQGLKIITEQLTHSLYQRALTDMIAHITQGKSLSSFMRHNPLFPPICYQFISSAENSGQLQFFCQQLTHWFYHQLEERLDSVKTWLEPILMTLIALITGTLIIAMYLPVLQLGDTIH
>NZ_CP048404.1|WP_060555640.1|2723491_2724106_+|dephospho-CoA-kinase
MTYTVALTGGIGSGKTTIANGFASLGVPLVDADVIARLVVEPDSPGLKALQQHFGDTILLPDGKLNRAQLRHIIFQNQQEKAWVNQLLHPLIQQETQKQIQQIRAPYFIWVVPLLVENKLTHLADRILVVDVTEEEQITRTMQRDGVSRDHVLKILQAQAKREQRLAVADDIIENHDNSLNQDEQIKRLHQHYLELAQKSNTGQ
>NZ_CP048404.1|WP_004250354.1|2724108_2724861_+|cell-division-protein-ZapD
MSEETSTIIFEHPLNEKMRSWLRIENSLIQLNSFQSINSLSSALSFFRAVSEFIEVLDRGEIRAELLKELEKRQKKLQQWLSFPNVDKEIVSHIINELSESACALSKAPRIGQHLKQDKIISLVKQRLSIPGGCCSFDVPTLHLWLNLPQTVRTEKLTCWQEGLYPLQNALNALLTLIRQSDTFKPVLSHSGFYQDSTEEGELLRIKLLASQQIYPQVSGHKNRYAIRFLPLDSEHGTIPSELPFEISCC

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Crispr_ID: NZ_CP048404_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048404_3

3746492-3746631

Orphan

Consensus_repeat	Method
CCCAGTTCCCAACTATTTTGTCA	PILER-CR

2 spacers

TnsE_C

The CRISPR arrays of NZ_CP048404_3

>merge|NZ_CP048404|3|3746492-3746631|PILER-CR
AGTTCCAAACTATTTTGTCATTTTTAATTTTCGTATTAGCTTACGACGCTACACCCAGTTCCCATCTATTTTGTCACTCTTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCCAGTTCCCAACTATTTTGTCC

>NZ_CP048404|3|1|3746492-3746631|PILER-CR
AGTTCCAAACTATTTTGTCATTT	TTAATTTTCGTATTAGCTTACGACGCTACACCC
AGTTCCCATCTATTTTGTCACTC	TTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCC
AGTTCCCAACTATTTTGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048404.1\|WP_000497519.1\|3745375_3745702_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP048404.1\|WP_000251879.1\|3738578_3740195_+\|transposase	TnsE_C	TnsE	gnl\|CDD\|376049
NZ_CP048404.1\|WP_112843228.1\|3753149_3753629_+\|Hcp-family-type-VI-secretion-system-effector	unknown	unknown	gnl\|CDD\|213799
NZ_CP048404.1\|WP_063860585.1\|3743656_3744397_-\|subclass-B1-metallo-beta-lactamase-IMP-27	unknown	unknown	gnl\|CDD\|293859
NZ_CP048404.1\|WP_112843226.1\|3754048_3754885_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048404.1\|WP_112843229.1\|3752617_3752848_-\|YjeO-family-protein	unknown	unknown	gnl\|CDD\|337858
NZ_CP048404.1\|WP_163806966.1\|3752157_3752562_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_CP048404.1\|WP_000071896.1\|3744724_3745261_+\|class-2-integron-integrase-IntI2	unknown	unknown	gnl\|CDD\|131303
NZ_CP048404.1\|WP_049220590.1\|3747054_3748131_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP048404.1\|WP_049220169.1\|3755187_3756000_-\|phosphonoacetaldehyde-hydrolase	unknown	unknown	gnl\|CDD\|184075
NZ_CP048404.1\|WP_000704156.1\|3743063_3743588_-\|streptothricin-N-acetyltransferase-Sat2	unknown	unknown	gnl\|CDD\|366181
NZ_CP048404.1\|WP_000119696.1\|3741212_3741584_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048404.1\|WP_023843642.1\|3749883_3750891_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP048404.1\|WP_001206315.1\|3742217_3743006_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	unknown	unknown	gnl\|CDD\|184296
NZ_CP048404.1\|WP_163806964.1\|3748143_3749835_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP048404.1\|WP_001271300.1\|3740425_3740803_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048404.1\|WP_112843227.1\|3753651_3754056_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_CP048404.1\|WP_001353740.1\|3745889_3746129_-\|DUF1819-family-protein	unknown	unknown	gnl\|CDD\|378066
NZ_CP048404.1\|WP_001444089.1\|3741644_3742142_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048404.1\|WP_163806965.1\|3750955_3752083_+\|TIGR03364-family-FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|132407

Protein	Function_ID	Function_description	E-value
NZ_CP048404.1\|WP_000497519.1\|3745375_3745702_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	2.82591e-45
NZ_CP048404.1\|WP_000251879.1\|3738578_3740195_+\|transposase	gnl\|CDD\|376049	pfam18623, TnsE_C, TnsE C-terminal domain. The bacterial transposon Tn7 facilitates horizontal transfer by directing transposition into actively replicating DNA with the element-encoded protein TnsE. Structural analysis of the C-terminal domain of TnsE identified a central V-shaped loop that toggles between two distinct conformations. It is suggested that a conformational change within the C-terminal domain of TnsE underlies target site selection by regulating stable engagement of the target DNA while providing a signal for activating transposition.	6.8797e-67
NZ_CP048404.1\|WP_112843228.1\|3753149_3753629_+\|Hcp-family-type-VI-secretion-system-effector	gnl\|CDD\|213799	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family. This family includes Hcp1 (hemolysin coregulated protein 1), an exported, homohexameric ring-forming virulence protein from Pseudomonas aeruginosa. Hcp1 lacks a conventional signal sequence and is instead exported by means of the type VI secretion system, encoded by a pathogenicity cluster of a class previously designated IAHP (IcmF-associated homologous protein). Homologs of Hcp1, in this protein family, are found in various bacteria of which most but not all are known pathogens. Pathogens may have many multiple members of this family, with three to ten in Erwinia carotovora, Yersinia pestis, uropathogenic Escherichia coli, and the insect pathogen Photorhabdus luminescens. [Cellular processes, Pathogenesis].	1.13388e-59
NZ_CP048404.1\|WP_063860585.1\|3743656_3744397_-\|subclass-B1-metallo-beta-lactamase-IMP-27	gnl\|CDD\|293859	cd16301, IMP_DIM-like_MBL-B1, IMP-1, DIM-1, GIM-1, SIM-1, TMB-1 and related metallo-beta-lactamases, subclass B1; MBL-fold metallo-hydrolase domain. Includes the acquired MBLs IMP-1(a beta-lactamase that is active on imipenem), DIM-1 (Dutch imipenemase), GIM-1 (German imipenemase), KHM-1 (Kyorin Health Science MBL 1), SIM-1 (Seoul imipenemase), and TMB-1 (Tripoli metallo-beta-lactamase). IMP-1, DIM-1, GIM-1, SIM-1, and TMB-1 are Class 1 integron-mediated MBLs, KMH-1 is plasmid-mediated. MBLs (class B of the Ambler beta-lactamase classification) are a diverse group of metallo-enzymes that are capable of catalyzing the hydrolysis of a wide range of beta-lactam antibiotics. MBLs have been divided into three subclasses B1, B2 and B3, based on sequence/structural relationships and substrates, with the B1 and B2 MBLs being most closely related to each other. This subgroup of acquired MBLs belongs to the B1 subclass. B1 enzymes are most active with two zinc ions bound in the active site, and have a broad-spectrum substrate profile.	1.98865e-115
NZ_CP048404.1\|WP_112843229.1\|3752617_3752848_-\|YjeO-family-protein	gnl\|CDD\|337858	pfam10840, DUF2645, Protein of unknown function (DUF2645). This family of proteins appear to be restricted to Enterobacteriaceae. Some members in the family are annotated as YjeO however no function for this protein is currently known.	1.87871e-18
NZ_CP048404.1\|WP_163806966.1\|3752157_3752562_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	5.69904e-30
NZ_CP048404.1\|WP_000071896.1\|3744724_3745261_+\|class-2-integron-integrase-IntI2	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	3.54716e-72
NZ_CP048404.1\|WP_049220590.1\|3747054_3748131_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP048404.1\|WP_049220169.1\|3755187_3756000_-\|phosphonoacetaldehyde-hydrolase	gnl\|CDD\|184075	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional.	3.79538e-158
NZ_CP048404.1\|WP_001353740.1\|3745889_3746129_-\|DUF1819-family-protein	gnl\|CDD\|378066	pfam08849, DUF1819, Putative inner membrane protein (DUF1819). These proteins are functionally uncharacterized. Several are annotated as putative inner membrane proteins.	2.15941e-15
NZ_CP048404.1\|WP_000704156.1\|3743063_3743588_-\|streptothricin-N-acetyltransferase-Sat2	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.87486e-19
NZ_CP048404.1\|WP_023843642.1\|3749883_3750891_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP048404.1\|WP_163806965.1\|3750955_3752083_+\|TIGR03364-family-FAD-dependent-oxidoreductase	gnl\|CDD\|132407	TIGR03364, putative_secreted_oxidoreductase, FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.	2.27613e-148
NZ_CP048404.1\|WP_112843227.1\|3753651_3754056_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	3.18933e-32
NZ_CP048404.1\|WP_163806964.1\|3748143_3749835_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP048404.1\|WP_001206315.1\|3742217_3743006_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	gnl\|CDD\|184296	PRK13746, PRK13746, aminoglycoside resistance protein; Provisional.	1.61477e-174

>NZ_CP048404.1|WP_001353740.1|3745889_3746129_-|DUF1819-family-protein
MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKENVLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC
>NZ_CP048404.1|WP_000497519.1|3745375_3745702_+|tyrosine-type-recombinase/integrase
MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGLMLLINQ
>NZ_CP048404.1|WP_000071896.1|3744724_3745261_+|class-2-integron-integrase-IntI2
MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQTMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRLPSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGKGGKSRNSLLPTRLIPAIK
>NZ_CP048404.1|WP_063860585.1|3743656_3744397_-|subclass-B1-metallo-beta-lactamase-IMP-27
MKKLFVLCVFVFCSITVAGETLPNLRVEKLEEGVYVHTSYEEVKGWGVVTKHGLVVLIGADAYLIDTPFTAKDTEKLVNWFVERGYKIKGTVSSHFHSDSTGGIEWLNSQSIPTYASELTNELLKKDGKVQAKNSFDGVSYWLAKDKIEVFYPGPGHTQDNVVVWLPEKEILFGGCFVKPHGLGNLGDANLEAWPESAKILMEKYGKAKLVVSGHSETGDATHLKRTWEQAVKGLKESKKTLQPSN
>NZ_CP048404.1|WP_000704156.1|3743063_3743588_-|streptothricin-N-acetyltransferase-Sat2
MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSPYRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAHSLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNETAMYWYWFSGAQDDA
>NZ_CP048404.1|WP_001206315.1|3742217_3743006_-|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1
MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK
>NZ_CP048404.1|WP_001444089.1|3741644_3742142_-|hypothetical-protein
MRDLLKVVLSLVLAMASGQALADLPIVLVDEARLPYDYSPSNYDISPSNYDNSISNYDNSPSNYDNSESNYDNSSSNYDNSRNGNRRLIYSANGSRTFAGYYVIANNGTTNFFSTSGKRMFYTPKGGRGVYGGKDGSFCGALVVINGQFSLALTDNGLKIMYLSN
>NZ_CP048404.1|WP_000119696.1|3741212_3741584_-|hypothetical-protein
MSYEPPRDGYTNGYIVDVMYDNRPSKYPAVFRTYVRIPDYVELDNAEELADAIIREVELKEAWLTRVLGNSADPDASVGKWDRRLAQCGGIDEMSSGVQATYFSPNGQLVGLVAYIDAEWMDE
>NZ_CP048404.1|WP_001271300.1|3740425_3740803_-|hypothetical-protein
MSAAKALAYALCDKLESKKVDEVVRNLVSSGWNIREVAWEASSFDHEMPYFDTGRDFDIGFPDTLSSKIEFLTANGSIVQARARLHFKQALIFAKASKHVAALKNSLDYYYGSSVIPPQNHGGYL
>NZ_CP048404.1|WP_000251879.1|3738578_3740195_+|transposase
MVRLATFNDNVQVVHIGHLFRNSGHKEWRIFVWFNPMQERKWTRFTHLPLLSRAKVVNSTTKQINKADRVIEFEASDLQRAKIIDFPNLSSFASVRNKDGAQSSFIYEAETPYSKTRYHIPQLELARSLFLINSYFCRSCLSSTALQQEFDVQYEVERDHLEIRILPSSSFPKGALEQSAVVQLLVWLFSDQDVMDSYESIFRHYQQNREIKNGVESWCFSFDPPPMQGWKLHVKGRSSNEDKDYLVEEIVGLEINAMLPSTTAISHASFQEKEAGDGSTQHIAVSTESVVDDEHLQLDDEETANIDTDTRVIEAEPTWISFSRPSRIEKSRRARKSSQTILEKEEATTSENSNLVSTDEPHLGGVLAAADVGGKQDATNYNSIFANRFAAFDELLSILKTKFACRVLFEETLVLPKVGRSRLHLCKDGSPRVIKAVGVQRNGSEFVLLEVDASDGVKMLSTKVLSGVDSETWRNDFEKIRRGVVKSSLNWPNSLFDQLYGQDGHRGVNHPKGLGELQVSREDMEGWAERVVREQFTH
>NZ_CP048404.1|WP_049220590.1|3747054_3748131_+|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MLQFTINSQNGSMPHIRVENIQKRFNQFIALDGVSLEIKQGELVCLLGPSGCGKTTLLRCIAGLETQDHGSIFNYDNNISHLPPQARDYGILFQSYALFPNLTVQQNIAYGLAGQPRNVIKNRVNEMLELVGLQDRKKKYPGELSGGQQQRVALARALAPAPSLLLLDEPMSALDAQVREHLCVELRNLQQSLNITTLMVTHNQDEAMLMADRIAVMNNGKVEQYGSSEEIYNHPQTPFVAEFVGKGNWLPFNRNQHGEAMIGSREVQLKHTAVPHNQGRLFCRPESIKINPIQNKHNQYDANIQNVVFLGSRCIMKFELDHLPGHLLQAEISAAELHSIQNGKVKVTLPANELHIFA
>NZ_CP048404.1|WP_163806964.1|3748143_3749835_+|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MSVIVPTKSINRLDSFFVAGGKLFIICLLTLGVLLPLLAIFWRGFTPDISQGGGFQAAIDLFTSANFLWLVGNSISVSLSVAVITVPLAYLFAYALHRTLIPFKSLWRGISLLPLLAPSMLPGIALVYLFGNQGLLRSLLTESIYGYWGLVLGEVIYTFPHALMILLSALSMSDARLFDAASSLGASSWRTFRSVTWSSSRHGIFAALCLVFTLTITDFGIPVVVGGDYQVLALEAYKAVLGQQQFGRGALIGMLLLLPALLTFGVDVWLRKRQRDAMSSRAQFYLPKANFQRDTLYLIFVMLICALFLLVFGTAVYSSFIQFWPYNLSFSLRHYNFEGLPGGWLAYTNSIILAFYTATIGCFLIFMGAYLIEKTASHSWLNNLLRMLSFVPMAVPGLVLGLGYVFFFNLPNNLLNFLYGSMVLLVLCSIAHFFTTAYMTASTALRQLDKEFEAASLSLKAPLYRHFWRITIPLCLPALLDIYRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNIGGAAAMSTLILTTSAGVSILLSIASQGVIRRTQAWHQREAKQ
>NZ_CP048404.1|WP_023843642.1|3749883_3750891_+|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MLKKLILATSLLFSAGTVFAATEITVYTAIESEQLQAYKQAFEAKYPDIKIKWVRDSTGIITAKLLAEKDRPQADVVWGLAASSLAILKAQNMLEPYAPAQLDDIDVKFRDSNNPPTWVGMDVWAATICYNTIEAQKLGLSKPTSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQIFGEQEGWAYMDKLHQNIGQYVHSGSKPCKMAASGEYPIGISFEYPALQLKRQGAPLDIILPQEGLGWDIEATAIIKGTNKRDAAQKLADFSASKEAMKLYSANFAVLANTSVPVSQTELPRDYAQRLIKNDFIWAAEKRDTILTEWRKRYDGKSAK
>NZ_CP048404.1|WP_163806965.1|3750955_3752083_+|TIGR03364-family-FAD-dependent-oxidoreductase
MKFDIAVIGAGIIGLSHAYAAAQRGLRVAIFERSYTPVGASVRNFGHGLILGQAPGKMLDLAKNSREIWATMAKQAKFLTRQKGTYLLARTQSEQAVLEAFVDSRAKTYGYDCELLSKTQLATVYGGQLQHHRAALHGKEDQVLFSREAIPQLAAYLGSLANVTSYFSTLVRDIDVDTGTLITSNGTFSAEKIIVCSGHDYQTLLADEIKKLDPIVCRLQMLRVTAEQNIGLAHALMTGLSCTHYGAFADLPEAQALAKEIKMQSPLIEQYGIHLLITPTPYGDLIIGDSHEYSLDAQPFNSEEVDNLLIELAEHTLGCSVQVKERWQGVYGAKGKEPISILTPSEKVTAVLMRTGLGMSVGPGLGEQNIRQLFD
>NZ_CP048404.1|WP_163806966.1|3752157_3752562_-|DUF1240-domain-containing-protein
MIKIEPVKLILSSIAILFIAIFSIYISTSYYITYFLMEDRILFSFQTGLLVFATPLILYFSYYSFILGYQKKLQKMNNKVAGICAGIAIVGIVFSFFFSIYVALDLTSKGYYSCYKSSAFAPNEYVIAKEMCKK
>NZ_CP048404.1|WP_112843229.1|3752617_3752848_-|YjeO-family-protein
MNILSISDYEWMIGEGDIDNLCQLPLNGRYVIEPILILIPCILLLFLEKNTKLRWGYVTITVMYIIWSFYLRFNFC
>NZ_CP048404.1|WP_112843228.1|3753149_3753629_+|Hcp-family-type-VI-secretion-system-effector
MAYPTYLVLKGKNQGLISAGCSTSDSIGNRYQIGHENEIQIISLNYGSFREQNASYRPIVFTKPIDKSSPLLSVALDSNEVLEATFIFYRTSQNGQLEKYYEIKLTGVSLIEISDIFPDSIKDNESMPYQRIQMKYESISRSHLMANTSSYSINSEIIK
>NZ_CP048404.1|WP_112843227.1|3753651_3754056_-|DUF1240-domain-containing-protein
MVKINSPKLYLIAIFLLSLALFCFYDSIIYYKNYFMMKDRILFSFQTGLLFFAAPLIIYFSYLIFICGYTKKTQRMNNKVAGICTGIAIVGIVFSFFFSIYVGLDLTSKGYYRCYKSSAFAPNEYVIAKEMCKK
>NZ_CP048404.1|WP_112843226.1|3754048_3754885_-|hypothetical-protein
MGYVYDTTVIDWDKEYKYANYSIIKEIINNEKDDDNVAAIITVEEAEYILSNESTPTPFKSSKDTLLGTIDFISNFSGNLYEAYRLDRIISEFGNINIRATQYTGPNGNVYIRLSGHPGVRFFLNGTRYLANNPRILFMGVGTQGINDISVGAARFAIVFSAAYRVVELIFKNEYTLVDFFVNVTMDMAKLAISTQISTAIVGGLTTTGLITGGSVIVVSIGVFLIGLAIAYALYKLDDKYQISENIIKALKNNRSKKTTPAYHPDQFFSQWGKFSHG
>NZ_CP048404.1|WP_049220169.1|3755187_3756000_-|phosphonoacetaldehyde-hydrolase
MNKSVEAVILDWAGTVVDFGSFAPTQIFVDAFAQAFNFKISLSEARGPMGMGKIDHIRALLNEPNIRTRWTAQFGHPPSEEEAQHIYCTFMPLQIAQVVHFAKPIEGALEAISTIRAQGIKIGSCSGYPKAVMDVLVPKAAEYGYQPDCVVASDEIAAGSRPGPWMALKNVIELGIMSVARCVKVDDAVTGIAEGLNAGMWTVGLSVSGNEFGATFEQYQTMEQAEIENRKRIAENKLRTAGAHYIIDTLANLPAVIEDINQRIANNQKP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10387-10419	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72648-72680	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15133-15165	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62060-62092	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28402-28434	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25816-25848	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23240-23272	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57315-57347	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64739-64771	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95158-95190	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41349-41381	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10767-10799	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13633-13665	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10830-10862	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10767-10799	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15396-15428	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172056-172088	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68063-68095	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74789-74821	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78315-78347	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89271-89303	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152291-152323	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17850-17882	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75880-75912	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40084-40116	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42453-42485	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13464-13496	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12090-12122	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57128-57160	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42619-42651	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38153-38185	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10525-10557	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49215-49247	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140941-140973	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46467-46499	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150963-150995	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7471-7503	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116699-116731	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42620-42652	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10443-10483	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40020-40060	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72704-72744	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42389-42429	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15189-15229	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62116-62156	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13400-13440	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28458-28498	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25872-25912	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23296-23336	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12026-12066	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57371-57411	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64795-64835	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95214-95254	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57064-57104	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41405-41445	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10823-10863	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42555-42595	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13689-13729	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10886-10926	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10823-10863	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38089-38129	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10461-10501	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15452-15492	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172112-172152	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68119-68159	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74845-74885	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78371-78411	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49151-49191	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140877-140917	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46403-46443	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150899-150939	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89327-89367	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7407-7447	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152347-152387	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17906-17946	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116635-116675	0	1.0
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42556-42596	0	1.0
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052804	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence	113091-113123	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP038508	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence	228634-228666	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052788	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence	321488-321520	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052786	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence	10079-10111	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052838	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence	13470-13502	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP051676	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence	201786-201818	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052779	Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence	212524-212556	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052832	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence	277011-277043	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73380-73412	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052806	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence	282696-282728	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052818	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence	1788-1820	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87104-87136	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052795	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence	166287-166319	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP047882	Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence	264306-264338	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052802	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence	197576-197608	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052840	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence	9544-9576	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052836	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence	222743-222775	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052828	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence	8856-8888	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052826	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence	292607-292639	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP016409	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence	299316-299348	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	299920-299952	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP016413	Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence	295999-296031	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_CP016411	Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence	293612-293644	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	CP052814	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence	281790-281822	2	0.939
NZ_CP048404_3	3.1\|3746515\|33\|NZ_CP048404\|PILER-CR	3746515-3746547	33	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61314-61346	2	0.939
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75936-75976	2	0.951
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73436-73476	2	0.951
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87160-87200	2	0.951
NZ_CP048404_3	3.2\|3746571\|41\|NZ_CP048404\|PILER-CR	3746571-3746611	41	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61250-61290	2	0.951

1. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

2. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

3. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

4. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

5. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

6. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

7. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

8. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

9. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

10. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

11. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

12. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

13. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

14. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

15. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

16. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

17. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

18. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

19. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

20. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

21. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

22. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

23. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

24. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

25. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

26. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

27. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

28. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

29. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

30. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

31. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

32. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

33. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

34. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

35. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

36. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

37. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

38. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

39. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

40. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

41. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

42. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

43. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

44. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

45. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

46. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

47. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

48. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

49. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

50. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

51. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

52. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

53. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

54. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

55. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

56. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

57. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

58. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

59. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

60. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

61. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

62. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

63. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

64. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

65. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

66. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

67. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

68. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

69. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

70. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

71. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

72. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

73. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

74. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

75. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

76. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

77. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

78. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

79. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

80. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

81. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

82. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

83. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

84. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

85. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

86. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

87. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

88. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

89. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

90. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

91. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

92. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

93. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

94. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

95. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

96. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

97. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

98. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

99. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

100. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

101. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

102. spacer 3.1|3746515|33|NZ_CP048404|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

103. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccaccctc	Protospacer
***************************************..

104. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

105. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

106. spacer 3.2|3746571|41|NZ_CP048404|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1052785 : 1064140

Mycobacterium_phage(25.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246075.1\|1052785_1053985_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6
WP_004247427.1\|1054594_1055563_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.5e-133	71.0
WP_004252248.1\|1055588_1057715_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-205	51.3
WP_004246072.1\|1057743_1058148_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	38.5
WP_004246071.1\|1058159_1058384_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_017827772.1\|1058665_1059139_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246068.1\|1059336_1059546_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_004246058.1\|1060003_1060378_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0
WP_004246057.1\|1060393_1061359_-	lipoyl synthase	NA	NA	NA	NA
WP_004246056.1\|1061460_1062105_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_026090527.1\|1062466_1062730_-	YbeD family protein	NA	NA	NA	NA
WP_004246054.1\|1062928_1064140_-	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	8.6e-105	49.1

DBSCAN-SWA_2

1100066 : 1146476

Proteus_phage(17.02%)

integrase,lysis,tail

attL 1099980:1099998|attR 1153395:1153413

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1099980:1099998	attL	NA	NA	NA	NA
WP_026090525.1\|1100066_1101068_-\|integrase	tyrosine-type recombinase/integrase	Q9MCR4	Enterobacteria_phage	9.7e-70	44.0
WP_012367595.1\|1101024_1101270_-	excisionase	NA	NA	NA	NA
WP_036907939.1\|1101266_1101587_-	DUF2591 domain-containing protein	A0A1P8DTH6	Proteus_phage	1.3e-15	51.9
WP_036907940.1\|1101913_1102189_-	hypothetical protein	NA	NA	NA	NA
WP_036907941.1\|1102181_1102409_-	hypothetical protein	A0A1P8DTI8	Proteus_phage	5.3e-24	71.2
WP_036907942.1\|1102461_1103046_-	hypothetical protein	NA	NA	NA	NA
WP_036907943.1\|1103117_1103414_-	hypothetical protein	NA	NA	NA	NA
WP_036907944.1\|1103478_1104159_-	hypothetical protein	R9VWB9	Serratia_phage	9.8e-66	54.8
WP_065424120.1\|1104161_1104341_-	hypothetical protein	A0A1P8DTH9	Proteus_phage	2.2e-25	93.0
WP_049197573.1\|1104378_1104579_-	hypothetical protein	NA	NA	NA	NA
WP_163806499.1\|1104594_1105188_-	single-stranded DNA-binding protein	A0A1W6JNW8	Morganella_phage	1.5e-46	82.9
WP_087740865.1\|1105177_1105876_-	exonuclease	A0A0P0ZBV6	Stx2-converting_phage	6.3e-76	61.6
WP_004247463.1\|1105872_1106757_-	recombinase RecT	A0A2L1IV84	Escherichia_phage	7.7e-95	62.5
WP_163806501.1\|1106753_1107005_-	hypothetical protein	A0A1P8DTG3	Proteus_phage	1.2e-37	94.0
WP_004247465.1\|1107001_1107265_-	hypothetical protein	NA	NA	NA	NA
WP_004247466.1\|1107516_1107744_-	hypothetical protein	NA	NA	NA	NA
WP_004247467.1\|1107866_1108142_-	hypothetical protein	NA	NA	NA	NA
WP_004247469.1\|1108306_1108492_+	hypothetical protein	NA	NA	NA	NA
WP_004247470.1\|1108488_1108641_-	hypothetical protein	NA	NA	NA	NA
WP_004247471.1\|1108826_1109039_+	hypothetical protein	NA	NA	NA	NA
WP_004247473.1\|1109145_1109466_-	hypothetical protein	A0A1W6JNZ0	Morganella_phage	5.0e-20	52.3
WP_004247474.1\|1109841_1110351_-	DUF4411 family protein	NA	NA	NA	NA
WP_004247475.1\|1110347_1111472_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_004245991.1\|1111597_1111939_-	DUF3024 domain-containing protein	A0A1W6JP12	Morganella_phage	2.1e-37	62.8
WP_004247476.1\|1111947_1112592_-	LexA family transcriptional regulator	A0A077KGZ5	Edwardsiella_phage	9.6e-79	64.5
WP_004247477.1\|1112697_1112907_+	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-25	83.3
WP_036907956.1\|1113070_1113418_+	hypothetical protein	A0A1P8DTF0	Proteus_phage	2.6e-06	35.4
WP_049200753.1\|1113684_1114452_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	3.0e-23	51.9
WP_046335275.1\|1114451_1115837_+	AAA family ATPase	Q716D2	Shigella_phage	1.0e-114	47.7
WP_004247485.1\|1115862_1116312_+	hypothetical protein	A0A2H4FNF5	Salmonella_phage	2.9e-13	32.2
WP_004245984.1\|1116390_1116681_+	DUF1364 domain-containing protein	A0A2H4JIC4	uncultured_Caudovirales_phage	7.2e-34	68.1
WP_004245983.1\|1116677_1117034_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.2e-44	71.6
WP_004247487.1\|1117033_1117666_+	antitermination protein	I6PDF8	Cronobacter_phage	7.3e-23	34.3
WP_004247148.1\|1117975_1118497_+	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_004247488.1\|1118655_1119078_+	hypothetical protein	NA	NA	NA	NA
WP_004247489.1\|1119131_1119401_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	6.0e-19	53.5
WP_004247490.1\|1119400_1119871_+	lysozyme	A0A1W6JNW4	Morganella_phage	5.2e-50	61.8
WP_004247493.1\|1120013_1120475_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	1.7e-24	47.2
WP_004247494.1\|1120822_1121407_+	Bro-N domain-containing protein	Q3LZN7	Bacteriophage	2.0e-22	48.2
WP_004245979.1\|1121403_1121610_+	hypothetical protein	NA	NA	NA	NA
WP_004245977.1\|1121792_1122401_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.4e-65	69.6
WP_004247496.1\|1122403_1123891_+	hypothetical protein	A0A1W6JNY3	Morganella_phage	1.3e-264	88.8
WP_004247497.1\|1123890_1125261_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	5.3e-119	48.6
WP_004247498.1\|1125257_1126379_+	hypothetical protein	I6PD76	Cronobacter_phage	6.1e-105	51.5
WP_004247499.1\|1126448_1126694_+	hypothetical protein	NA	NA	NA	NA
WP_004247500.1\|1126790_1127552_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	2.6e-67	59.3
WP_004247501.1\|1127565_1128519_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	1.1e-126	71.9
WP_107033975.1\|1128521_1128806_+	hypothetical protein	NA	NA	NA	NA
WP_004245968.1\|1128845_1129325_+	hypothetical protein	G8C7P9	Escherichia_phage	2.9e-32	47.7
WP_004247502.1\|1129327_1129678_+	hypothetical protein	I6PD77	Cronobacter_phage	4.9e-21	45.1
WP_004247503.1\|1129679_1130261_+	hypothetical protein	G8C7Q1	Escherichia_phage	3.0e-47	51.6
WP_004247504.1\|1130257_1130659_+	DUF4128 domain-containing protein	NA	NA	NA	NA
WP_004247505.1\|1130704_1131361_+	hypothetical protein	G8C7Q3	Escherichia_phage	8.6e-59	57.7
WP_004245960.1\|1131412_1131718_+	hypothetical protein	I6PDG2	Cronobacter_phage	6.6e-22	55.4
WP_051008871.1\|1131732_1132020_+	hypothetical protein	A0A2H4J4F7	uncultured_Caudovirales_phage	6.9e-13	49.3
WP_004247508.1\|1132048_1132255_-	hypothetical protein	NA	NA	NA	NA
WP_004247509.1\|1132407_1132779_+	hypothetical protein	E7C9U7	Salmonella_phage	4.4e-36	65.7
WP_004247510.1\|1132792_1132975_-	hypothetical protein	A0A192Y6A8	Salmonella_phage	3.7e-20	76.3
WP_109880200.1\|1133309_1134311_+	hypothetical protein	A0A0R6PIZ6	Moraxella_phage	1.8e-36	31.0
WP_036907985.1\|1134484_1134895_+	hypothetical protein	B9UDL3	Salmonella_phage	2.5e-48	71.1
WP_049197583.1\|1134957_1137888_+\|tail	phage tail tape measure protein	K7PMB9	Enterobacterial_phage	3.6e-133	35.6
WP_004245945.1\|1137899_1138190_+	hypothetical protein	NA	NA	NA	NA
WP_004247516.1\|1138552_1138894_+\|tail	phage tail protein	I6PBN7	Cronobacter_phage	9.0e-28	50.0
WP_004247517.1\|1138890_1139634_+\|tail	phage minor tail protein L	K7PJS0	Enterobacterial_phage	7.1e-86	58.6
WP_004247518.1\|1139630_1140341_+	C40 family peptidase	A0A1P8DTI6	Proteus_phage	8.9e-86	62.0
WP_004247519.1\|1140337_1140943_+\|tail	tail assembly protein	F1C572	Cronobacter_phage	1.9e-52	56.8
WP_004247520.1\|1140994_1145188_+	DUF1983 domain-containing protein	F1C571	Cronobacter_phage	1.7e-301	54.5
WP_004245936.1\|1145181_1145550_+	hypothetical protein	NA	NA	NA	NA
WP_004247523.1\|1145551_1146166_+	hypothetical protein	NA	NA	NA	NA
WP_004247524.1\|1146215_1146476_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	1.9e-17	57.4
1153395:1153413	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1313843 : 1392839

Bacillus_phage(17.65%)

protease,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244558.1\|1313843_1314158_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-13	44.1
WP_004244559.1\|1314188_1316483_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-170	42.9
WP_004244560.1\|1316602_1316821_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_004247616.1\|1317140_1317833_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_112843271.1\|1317834_1319586_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	3.0e-18	31.2
WP_020945408.1\|1319588_1321358_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	3.0e-21	23.5
WP_004252032.1\|1321499_1322459_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.4e-64	45.5
WP_004244566.1\|1323001_1323496_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_163806524.1\|1323623_1327433_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.7e-90	49.3
WP_004244569.1\|1327545_1328151_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_012367706.1\|1328161_1329511_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.8e-79	40.6
WP_004244571.1\|1329644_1330934_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	46.2
WP_004252020.1\|1331113_1331446_-	hypothetical protein	NA	NA	NA	NA
WP_020945410.1\|1331844_1332894_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_163806525.1\|1332966_1333872_-	hypothetical protein	NA	NA	NA	NA
WP_004244575.1\|1334230_1334971_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.3e-20	27.0
WP_004244576.1\|1335078_1337361_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-159	41.6
WP_004244577.1\|1337415_1338270_-	formate transporter FocA	NA	NA	NA	NA
WP_036894537.1\|1338940_1340698_-	30S ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
WP_004244579.1\|1340925_1341963_+	L-asparaginase 2	NA	NA	NA	NA
WP_163806527.1\|1342037_1343312_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_020945415.1\|1343448_1344879_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	3.4e-07	24.6
WP_163806529.1\|1345015_1346104_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.7e-84	47.0
WP_017628441.1\|1346300_1347587_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_020945417.1\|1347875_1348553_+	(d)CMP kinase	NA	NA	NA	NA
WP_004244586.1\|1348734_1350408_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_004244587.1\|1350472_1350760_+	integration host factor subunit beta	A7KV42	Bacillus_phage	8.4e-11	40.0
WP_133177094.1\|1350816_1351005_+	hypothetical protein	NA	NA	NA	NA
WP_163806531.1\|1351209_1353579_+	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	2.1e-22	29.7
WP_004244589.1\|1353615_1355361_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	8.4e-61	30.9
WP_012367713.1\|1355357_1356359_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_004247631.1\|1356854_1357070_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_004244593.1\|1357484_1357664_+	hypothetical protein	NA	NA	NA	NA
WP_004244594.1\|1357668_1358430_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_046335153.1\|1358553_1359384_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_004244596.1\|1359763_1360537_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_004244597.1\|1360546_1361869_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_004247634.1\|1361849_1362581_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_163806533.1\|1362577_1367035_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_004247636.1\|1367316_1367970_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.2e-102	80.4
WP_163806535.1\|1368375_1369089_+	acid phosphatase AphA	NA	NA	NA	NA
WP_163806537.1\|1369431_1371147_+	L,D-transpeptidase	NA	NA	NA	NA
WP_004244605.1\|1371478_1372027_+	YcbK family protein	NA	NA	NA	NA
WP_004247640.1\|1372076_1372727_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004244607.1\|1372819_1373293_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_020945425.1\|1373383_1375120_-	TssP	NA	NA	NA	NA
WP_163806539.1\|1375112_1376468_-	hypothetical protein	NA	NA	NA	NA
WP_004244610.1\|1376505_1380054_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004244611.1\|1380056_1381520_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004244612.1\|1381525_1382176_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_004244614.1\|1382177_1382966_-	hypothetical protein	NA	NA	NA	NA
WP_163806541.1\|1382969_1385681_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.9e-84	30.5
WP_004244617.1\|1385689_1386445_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_017628433.1\|1386437_1387805_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004244619.1\|1387797_1388349_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_163806988.1\|1388350_1389619_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_163806543.1\|1389623_1390661_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_046334530.1\|1390624_1392400_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004244624.1\|1392407_1392839_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_4

1491976 : 1549373

Enterobacteria_phage(34.38%)

terminase,tRNA,integrase,protease,portal,tail,lysis,transposase

attL 1494391:1494406|attR 1544360:1544375

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004247117.1\|1491976_1493080_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_163806557.1\|1493185_1493638_-	NUDIX hydrolase	NA	NA	NA	NA
WP_063108982.1\|1493630_1494260_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
1494391:1494406	attL	NA	NA	NA	NA
WP_004247120.1\|1494398_1495652_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	92.6
WP_108717286.1\|1496390_1497020_-	hypothetical protein	NA	NA	NA	NA
WP_108717026.1\|1497332_1497962_+	hypothetical protein	NA	NA	NA	NA
WP_108717025.1\|1498086_1498689_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_162558076.1\|1498966_1500412_+	HNH endonuclease	NA	NA	NA	NA
WP_163806997.1\|1500702_1501068_-	hypothetical protein	NA	NA	NA	NA
WP_074561732.1\|1501578_1501752_+	isocitrate dehydrogenase	Q77Z09	Phage_21	4.7e-17	84.6
WP_163806559.1\|1506724_1506982_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_036969342.1\|1506987_1507230_-	transcriptional regulator	A0A2I7S995	Vibrio_phage	5.3e-14	64.9
WP_004247851.1\|1507562_1507769_+	hypothetical protein	NA	NA	NA	NA
WP_163806561.1\|1508070_1509093_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	7.7e-131	68.3
WP_012367809.1\|1509365_1510355_+	DUF4747 family protein	NA	NA	NA	NA
WP_041707125.1\|1510390_1510972_+	hypothetical protein	NA	NA	NA	NA
WP_004250558.1\|1511219_1511489_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	3.3e-17	47.8
WP_163806563.1\|1511488_1511959_+	lysozyme	A0A1W6JNW4	Morganella_phage	9.8e-49	58.2
WP_163806565.1\|1512101_1512563_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	5.0e-13	34.7
WP_163806567.1\|1512582_1513248_-	hypothetical protein	NA	NA	NA	NA
WP_163806569.1\|1513535_1513802_+	hypothetical protein	NA	NA	NA	NA
WP_070486613.1\|1514356_1514869_+	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	4.3e-58	64.0
WP_163806571.1\|1514881_1515376_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	3.9e-48	65.6
WP_163806573.1\|1515372_1517475_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	9.5e-293	68.5
WP_004247869.1\|1517471_1517687_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.2e-17	64.3
WP_163806575.1\|1517683_1519174_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.9e-191	67.2
WP_163806577.1\|1519139_1521128_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	5.1e-248	63.7
WP_163806578.1\|1521216_1521564_+	DUF2190 family protein	A5LH31	Enterobacteria_phage	4.0e-15	47.7
WP_074561719.1\|1521574_1521847_+	ATP-binding protein	K7PH43	Enterobacteria_phage	7.0e-15	44.9
WP_163806580.1\|1521856_1522420_+\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	6.2e-50	57.1
WP_163806582.1\|1522416_1522815_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.4e-40	58.0
WP_143475599.1\|1522826_1523348_+\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	1.7e-65	74.7
WP_163806584.1\|1523359_1523749_+\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	5.3e-16	41.5
WP_163806998.1\|1523769_1524090_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.7e-15	42.0
WP_163806586.1\|1524058_1527052_+\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	1.7e-109	31.1
WP_163806588.1\|1527052_1527382_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	1.8e-28	55.0
WP_135023839.1\|1527402_1527693_+	hypothetical protein	NA	NA	NA	NA
WP_163806590.1\|1527767_1528472_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	4.6e-66	50.6
WP_163806592.1\|1528493_1529222_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	4.7e-90	61.5
WP_163807000.1\|1529191_1529776_+\|tail	tail assembly protein	K7PH50	Enterobacteria_phage	2.0e-43	48.0
WP_163806594.1\|1529790_1532994_+	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	7.2e-276	55.3
WP_163806596.1\|1532983_1533316_+	hypothetical protein	NA	NA	NA	NA
WP_163806597.1\|1533315_1534002_+	hypothetical protein	NA	NA	NA	NA
WP_017827679.1\|1533998_1534265_+	hypothetical protein	NA	NA	NA	NA
WP_163806599.1\|1534281_1534584_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	4.4e-18	54.0
WP_139152539.1\|1534633_1534822_+	hypothetical protein	A0A2H4PRH0	Proteus_phage	2.2e-20	77.4
WP_004247893.1\|1534885_1535089_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	3.8e-26	84.8
WP_163806601.1\|1535428_1536706_+	RNA-directed DNA polymerase	A0A0H4U087	Erysipelothrix_phage	1.9e-09	25.1
WP_064506411.1\|1536696_1538715_+	reverse transcriptase	NA	NA	NA	NA
WP_004247897.1\|1539700_1540579_-	hypothetical protein	NA	NA	NA	NA
WP_163807002.1\|1541098_1541626_-	hypothetical protein	NA	NA	NA	NA
WP_049206374.1\|1542501_1542750_-	hypothetical protein	NA	NA	NA	NA
WP_004247902.1\|1542911_1543076_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-22	92.6
WP_049221303.1\|1543886_1544204_+	hypothetical protein	NA	NA	NA	NA
WP_049221300.1\|1544276_1545437_+	hypothetical protein	NA	NA	NA	NA
1544360:1544375	attR	NA	NA	NA	NA
WP_163806300.1\|1546236_1548048_+	hypothetical protein	NA	NA	NA	NA
WP_152964580.1\|1548212_1549373_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.2e-39	37.9

DBSCAN-SWA_5

1794477 : 1804469

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163806618.1\|1794477_1796535_-	potassium-transporting ATPase subunit KdpB	E4ZFI9	Streptococcus_phage	6.3e-31	26.3
WP_004248043.1\|1796546_1798247_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_004242887.1\|1798582_1799269_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_004242888.1\|1799268_1799730_+	nucleoside deaminase	S4VYZ2	Pandoravirus	7.0e-15	34.6
WP_004242890.1\|1799782_1800394_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	7.3e-28	39.1
WP_004242891.1\|1800533_1801394_-	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	3.7e-25	35.5
WP_004242892.1\|1801395_1802013_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	2.2e-72	58.6
WP_020945635.1\|1802024_1804469_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	3.3e-220	50.4

DBSCAN-SWA_6

2144891 : 2187090

Salmonella_phage(18.18%)

integrase,terminase,tail,holin

attL 2170683:2170699|attR 2192859:2192875

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004250905.1\|2144891_2145671_-	nucleotidyltransferase domain-containing protein	A0A2D1GQQ2	Pseudomonas_phage	1.4e-31	39.3
WP_163806672.1\|2146049_2146544_-	hypothetical protein	NA	NA	NA	NA
WP_163806675.1\|2146543_2146888_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	2.9e-42	83.3
WP_004243326.1\|2146890_2147163_-\|holin	phage holin family protein	T1SA10	Salmonella_phage	1.9e-12	38.9
WP_020945795.1\|2147159_2147531_-	hypothetical protein	G9L6E6	Escherichia_phage	3.9e-16	39.1
WP_163806677.1\|2147607_2150028_-	hypothetical protein	A0A0F6TJC8	Escherichia_coli_O157_typing_phage	2.7e-65	42.1
WP_163806678.1\|2150201_2150453_+	hypothetical protein	NA	NA	NA	NA
WP_109418845.1\|2150531_2151143_+	hypothetical protein	NA	NA	NA	NA
WP_163806680.1\|2151211_2154595_-	hypothetical protein	A0A2I7RY58	Vibrio_phage	5.2e-184	36.2
WP_163806681.1\|2154594_2157678_-	hypothetical protein	T1SBJ1	Salmonella_phage	9.3e-164	50.8
WP_020945802.1\|2157680_2158229_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	5.9e-45	59.6
WP_163806682.1\|2158228_2158717_-	hypothetical protein	A0A0F6R7N6	Escherichia_coli_O157_typing_phage	7.8e-49	60.5
WP_163806683.1\|2158700_2161163_-	hypothetical protein	A0A0F6TJD3	Escherichia_coli_O157_typing_phage	0.0e+00	69.9
WP_004243342.1\|2161162_2161768_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	5.1e-66	60.7
WP_004243343.1\|2161767_2162079_-	hypothetical protein	Q858G5	Salmonella_phage	1.8e-14	38.5
WP_020945807.1\|2162142_2162484_-	hypothetical protein	NA	NA	NA	NA
WP_163806684.1\|2162492_2162924_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.1e-30	55.5
WP_004243350.1\|2162982_2163963_-	hypothetical protein	G9L6C5	Escherichia_phage	6.5e-111	59.4
WP_163806685.1\|2163978_2164656_-	peptidase	T1SAP9	Salmonella_phage	2.8e-44	66.4
WP_163806686.1\|2164673_2164988_-	hypothetical protein	Q2A090	Sodalis_phage	1.2e-13	45.5
WP_163806687.1\|2164984_2166649_-\|tail	phage tail protein	A0A193GYI4	Enterobacter_phage	8.2e-199	65.6
WP_004243356.1\|2166658_2166871_-	hypothetical protein	NA	NA	NA	NA
WP_163806689.1\|2167056_2168541_-\|terminase	terminase	G9L6B8	Escherichia_phage	6.1e-230	77.6
WP_080047821.1\|2168540_2169104_-\|terminase	terminase small subunit	G9L6B7	Escherichia_phage	2.5e-43	50.3
WP_163806691.1\|2169258_2170311_+	hypothetical protein	NA	NA	NA	NA
WP_163806693.1\|2170361_2170697_-	hypothetical protein	H9C172	Pectobacterium_phage	1.6e-29	56.6
2170683:2170699	attL	NA	NA	NA	NA
WP_163806695.1\|2170689_2171049_-	DUF2591 domain-containing protein	NA	NA	NA	NA
WP_163806697.1\|2171048_2171246_-	hypothetical protein	NA	NA	NA	NA
WP_112843763.1\|2171371_2171767_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	5.2e-35	60.9
WP_064505760.1\|2171763_2172177_-	hypothetical protein	NA	NA	NA	NA
WP_049211513.1\|2172398_2172881_-	replication protein	NA	NA	NA	NA
WP_049211516.1\|2172849_2173785_-	hypothetical protein	A0A193GZ86	Enterobacter_phage	2.4e-70	57.6
WP_004250866.1\|2173786_2174008_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	8.5e-11	48.3
WP_163806699.1\|2174149_2174395_-	hypothetical protein	NA	NA	NA	NA
WP_004243373.1\|2174505_2175114_+	hypothetical protein	A0A0F6R8L7	Escherichia_coli_O157_typing_phage	1.5e-28	35.4
WP_163806701.1\|2175510_2177235_+	DNA breaking-rejoining protein	A0A0U2I1R6	Escherichia_phage	5.1e-111	47.0
WP_163806703.1\|2177280_2178321_+	recombinase RecT	H6WRX0	Salmonella_phage	1.9e-100	51.2
WP_004250862.1\|2178364_2178622_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_004250861.1\|2178675_2178870_+	hypothetical protein	NA	NA	NA	NA
WP_163806705.1\|2178906_2179191_+	hypothetical protein	A0A1P8DTG9	Proteus_phage	2.3e-45	91.5
WP_104836506.1\|2179190_2179685_+	ASCH domain-containing protein	A0A077KCB2	Edwardsiella_phage	2.9e-11	26.4
WP_071425471.1\|2179684_2180218_+	hypothetical protein	NA	NA	NA	NA
WP_060555936.1\|2180287_2181004_+	hypothetical protein	NA	NA	NA	NA
WP_060555937.1\|2181038_2181512_+	class I SAM-dependent methyltransferase	A0A1W6JP48	Morganella_phage	1.2e-70	78.7
WP_112843754.1\|2181508_2182150_+	DNA methyltransferase	I6PDF5	Cronobacter_phage	2.3e-72	61.1
WP_004250849.1\|2182152_2182350_+	hypothetical protein	A0A1P8DTH3	Proteus_phage	3.4e-19	65.1
WP_163806706.1\|2182545_2183742_-\|integrase	tyrosine-type recombinase/integrase	T1S9J3	Salmonella_phage	5.3e-139	61.4
WP_004250844.1\|2183961_2185539_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_004243391.1\|2185623_2187090_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.7e-89	38.7
2192859:2192875	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2368800 : 2386106

Burkholderia_phage(21.43%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004243609.1\|2368800_2369418_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.3e-88	67.8
WP_004243611.1\|2369421_2370198_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.1e-42	39.8
WP_063108406.1\|2370313_2370856_-	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	3.2e-19	34.7
WP_017628013.1\|2371424_2371604_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_112843326.1\|2371759_2372182_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_112843325.1\|2372322_2372559_-	hypothetical protein	F1BUK2	Cronobacter_phage	1.4e-06	33.8
WP_004243615.1\|2373870_2374527_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	2.3e-35	39.9
WP_049197274.1\|2374523_2375711_-	hypothetical protein	A0A2H5BG53	Pseudoalteromonas_phage	1.4e-72	37.9
WP_004243617.1\|2375703_2376048_-	hypothetical protein	NA	NA	NA	NA
WP_049197272.1\|2376044_2376737_-	hypothetical protein	A1Z003	Burkholderia_virus	1.6e-34	37.1
WP_004243622.1\|2376739_2377552_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
WP_004243623.1\|2377520_2377841_-	hypothetical protein	NA	NA	NA	NA
WP_004243624.1\|2377853_2378342_-	hypothetical protein	NA	NA	NA	NA
WP_112843323.1\|2378344_2380648_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	1.1e-15	23.3
WP_004243627.1\|2380730_2381189_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
WP_004243628.1\|2381248_2381701_-	hypothetical protein	NA	NA	NA	NA
WP_020945912.1\|2381711_2383199_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.4e-77	35.7
WP_012368090.1\|2383207_2383720_-	hypothetical protein	NA	NA	NA	NA
WP_112843322.1\|2384201_2384606_-	structural protein	A0A1B1IQT0	uncultured_Mediterranean_phage	3.5e-18	40.8
WP_004248367.1\|2384608_2384908_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.9e-21	51.0
WP_112843321.1\|2385290_2386106_-	antitermination protein	M9NZB0	Enterobacteria_phage	2.1e-54	43.1

DBSCAN-SWA_8

3113562 : 3122424

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049196997.1\|3113562_3115131_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-11	33.7
WP_012368337.1\|3115531_3116212_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_004245603.1\|3116308_3116884_-	TerD family protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
WP_004249446.1\|3116960_3117539_-	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	2.4e-33	41.5
WP_004245605.1\|3117606_3118632_-	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
WP_020946217.1\|3118666_3119122_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_163806861.1\|3119146_3120301_-	tellurium resistance protein TerA	NA	NA	NA	NA
WP_004250201.1\|3120301_3120886_-	tellurium resistance-associated protein TerZ	K4JRX3	Caulobacter_phage	4.2e-17	30.2
WP_017827550.1\|3121278_3122424_+	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	1.2e-31	27.2

DBSCAN-SWA_9

3692026 : 3745702

Virus_Rctr41k(22.22%)

tRNA,transposase,integrase

attL 3739304:3739317|attR 3746575:3746588

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246627.1\|3692026_3693055_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_004246625.1\|3693095_3693770_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_104731885.1\|3693887_3694511_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	1.4e-63	58.0
WP_004249862.1\|3694878_3696837_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.7e-89	39.1
WP_004246621.1\|3697001_3697313_+	DUF485 domain-containing protein	NA	NA	NA	NA
WP_020946467.1\|3697309_3698965_+	cation acetate symporter	NA	NA	NA	NA
WP_020946468.1\|3699266_3700898_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_049197412.1\|3700916_3701609_-	lactate utilization protein C	NA	NA	NA	NA
WP_004246616.1\|3701612_3703031_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_017628596.1\|3703021_3703759_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_163807012.1\|3709783_3710470_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_046335303.1\|3710550_3711948_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_004246607.1\|3712029_3712956_-	ribokinase	NA	NA	NA	NA
WP_017827657.1\|3713236_3714736_+	ATPase RavA	A0A0N9PBE1	Sulfolobus_monocaudavirus	1.1e-21	37.3
WP_046335304.1\|3714743_3716201_+	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_004246604.1\|3716201_3717194_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.3e-50	37.5
WP_004246603.1\|3717354_3717816_+	transcriptional regulator AsnC	NA	NA	NA	NA
WP_004249871.1\|3717916_3718357_+	FMN-binding protein MioC	NA	NA	NA	NA
WP_004246600.1\|3718736_3720635_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_046335305.1\|3720631_3721258_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_004246598.1\|3721872_3722250_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_004246597.1\|3722281_3723106_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_004246596.1\|3723151_3723391_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_004246595.1\|3723452_3723923_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_004246594.1\|3723935_3724469_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_004246592.1\|3724483_3726025_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_004246591.1\|3726082_3726946_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_004246589.1\|3726980_3728363_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_004246588.1\|3728384_3728801_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_004246587.1\|3728951_3730325_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	9.6e-28	32.3
WP_004246586.1\|3730482_3732309_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1I9J5	Paramecium_bursaria_Chlorella_virus	1.2e-131	44.6
WP_001029679.1\|3732468_3733290_+\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
WP_000267723.1\|3733276_3735385_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001276994.1\|3735381_3737049_+	AAA family ATPase	NA	NA	NA	NA
WP_001243518.1\|3737051_3738578_+\|transposase	transposase	NA	NA	NA	NA
WP_000251879.1\|3738578_3740195_+\|transposase	transposase	NA	NA	NA	NA
3739304:3739317	attL	NA	NA	NA	NA
WP_001271300.1\|3740425_3740803_-	hypothetical protein	NA	NA	NA	NA
WP_000119696.1\|3741212_3741584_-	hypothetical protein	NA	NA	NA	NA
WP_001444089.1\|3741644_3742142_-	hypothetical protein	NA	NA	NA	NA
WP_001206315.1\|3742217_3743006_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000704156.1\|3743063_3743588_-	streptothricin N-acetyltransferase Sat2	E4ZFP7	Streptococcus_phage	4.2e-16	38.9
WP_063860585.1\|3743656_3744397_-	subclass B1 metallo-beta-lactamase IMP-27	NA	NA	NA	NA
WP_000071896.1\|3744724_3745261_+\|integrase	class 2 integron integrase IntI2	A0A1P8DJJ6	Virus_Rctr41k	6.9e-14	34.4
WP_000497519.1\|3745375_3745702_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.1e-18	52.0
3746575:3746588	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048404

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection