CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048408	Pseudomonas fluorescens strain DR397 chromosome, complete genome	1 crisprs	DEDDh,csa3,DinG,cas3,WYL	0	0	8	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048408_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048408_1

522611-522741

Orphan

Consensus_repeat	Method
GTTCCCACGCTCTGCGTGGGAATGCAGCTTGTGACGCTCCGCGTCACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048408_1

>merge|NZ_CP048408|1|522611-522741|CRISPRCasFinder
GTTCCCACGCTCTGCGTGGGAATGCAGCTTGTGACGCTCCGCGTCACTGGGACGCAGAGCGTCCCTTGAGGCTTTTTTTGATCGTTCCCACGCTCTGCGTGGGAATGCAGCTCGTGACGCTCCGCGTCACT

>NZ_CP048408|1|1|522611-522741|CRISPRCasFinder
GTTCCCACGCTCTGCGTGGGAATGCAGCTTGTGACGCTCCGCGTCACT	GGGACGCAGAGCGTCCCTTGAGGCTTTTTTTGATC
GTTCCCACGCTCTGCGTGGGAATGCAGCTCGTGACGCTCCGCGTCACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048408.1\|WP_007952694.1\|527685_528426_+\|two-component-system-response-regulator-OmpR	unknown	unknown	gnl\|CDD\|181883
NZ_CP048408.1\|WP_064382739.1\|519857_520697_-\|taurine-ABC-transporter-permease-TauC	unknown	unknown	gnl\|CDD\|182276
NZ_CP048408.1\|WP_163973841.1\|520693_521488_-\|taurine-ABC-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|183056
NZ_CP048408.1\|WP_163973846.1\|531335_532115_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP048408.1\|WP_011331966.1\|532231_532639_+\|RNA-binding-protein-S4	unknown	unknown	gnl\|CDD\|224109
NZ_CP048408.1\|WP_039764576.1\|528540_529854_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
NZ_CP048408.1\|WP_039764556.1\|510573_512574_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|236635
NZ_CP048408.1\|WP_039764563.1\|517776_518814_+\|L-glyceraldehyde-3-phosphate-reductase	unknown	unknown	gnl\|CDD\|381376
NZ_CP048408.1\|WP_011331964.1\|530839_531319_-\|ATP-dependent-zinc-protease	unknown	unknown	gnl\|CDD\|226553
NZ_CP048408.1\|WP_163973839.1\|516417_517737_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274819
NZ_CP048408.1\|WP_163973838.1\|514190_516416_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP048408.1\|WP_163973840.1\|518957_519800_-\|taurine-dioxygenase	unknown	unknown	gnl\|CDD\|181947
NZ_CP048408.1\|WP_163973844.1\|524617_525001_-\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|224961
NZ_CP048408.1\|WP_163973847.1\|532707_533508_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|223743
NZ_CP048408.1\|WP_163973842.1\|521504_522482_-\|taurine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226904
NZ_CP048408.1\|WP_134333983.1\|525000_527325_-\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP048408.1\|WP_163973845.1\|529937_530843_-\|30S-ribosomal-protein-S6--L-glutamate-ligase	unknown	unknown	gnl\|CDD\|182468
NZ_CP048408.1\|WP_007952727.1\|512598_512859_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048408.1\|WP_163973843.1\|522819_524403_-\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|235001
NZ_CP048408.1\|WP_039764559.1\|512946_513984_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380489

Protein	Function_ID	Function_description	E-value
NZ_CP048408.1\|WP_007952694.1\|527685_528426_+\|two-component-system-response-regulator-OmpR	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	1.54337e-167
NZ_CP048408.1\|WP_064382739.1\|519857_520697_-\|taurine-ABC-transporter-permease-TauC	gnl\|CDD\|182276	PRK10160, PRK10160, taurine ABC transporter permease TauC.	9.42751e-114
NZ_CP048408.1\|WP_163973841.1\|520693_521488_-\|taurine-ABC-transporter-ATP-binding-subunit	gnl\|CDD\|183056	PRK11248, tauB, taurine ABC transporter ATP-binding subunit.	4.84505e-171
NZ_CP048408.1\|WP_011331966.1\|532231_532639_+\|RNA-binding-protein-S4	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	9.55448e-35
NZ_CP048408.1\|WP_039764576.1\|528540_529854_+\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	2.25002e-109
NZ_CP048408.1\|WP_163973845.1\|529937_530843_-\|30S-ribosomal-protein-S6--L-glutamate-ligase	gnl\|CDD\|182468	PRK10446, PRK10446, 30S ribosomal protein S6--L-glutamate ligase.	1.86173e-152
NZ_CP048408.1\|WP_039764556.1\|510573_512574_+\|BCCT-family-transporter	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP048408.1\|WP_039764563.1\|517776_518814_+\|L-glyceraldehyde-3-phosphate-reductase	gnl\|CDD\|381376	cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins. Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ), also called GAP reductase, is a founding member of aldo-keto reductase family 14 member A1 (AKR14A1). It catalyzes the stereospecific, NADPH-dependent reduction of L-glyceraldehyde 3-phosphate (L-GAP). It is also involved in the stress response as a methylglyoxal reductase which converts the toxic metabolite methylglyoxal to acetol in vitro and in vivo.	0
NZ_CP048408.1\|WP_011331964.1\|530839_531319_-\|ATP-dependent-zinc-protease	gnl\|CDD\|226553	COG4067, COG4067, Uncharacterized protein conserved in archaea [Posttranslational modification, protein turnover, chaperones].	1.30231e-56
NZ_CP048408.1\|WP_163973839.1\|516417_517737_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP048408.1\|WP_163973838.1\|514190_516416_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	3.58986e-67
NZ_CP048408.1\|WP_163973840.1\|518957_519800_-\|taurine-dioxygenase	gnl\|CDD\|181947	PRK09553, tauD, taurine dioxygenase; Reviewed.	0
NZ_CP048408.1\|WP_163973846.1\|531335_532115_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	7.69572e-67
NZ_CP048408.1\|WP_163973847.1\|532707_533508_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|223743	COG0671, PgpB, Membrane-associated phospholipid phosphatase [Lipid metabolism].	0.00185501
NZ_CP048408.1\|WP_163973844.1\|524617_525001_-\|PaaI-family-thioesterase	gnl\|CDD\|224961	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism].	2.50294e-34
NZ_CP048408.1\|WP_134333983.1\|525000_527325_-\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP048408.1\|WP_163973842.1\|521504_522482_-\|taurine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|226904	COG4521, TauA, ABC-type taurine transport system, periplasmic component [Inorganic ion transport and metabolism].	8.78885e-154
NZ_CP048408.1\|WP_163973843.1\|522819_524403_-\|glutamate--cysteine-ligase	gnl\|CDD\|235001	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional.	0
NZ_CP048408.1\|WP_039764559.1\|512946_513984_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	5.09686e-104

>NZ_CP048408.1|WP_163973842.1|521504_522482_-|taurine-ABC-transporter-substrate-binding-protein
MKLNFPLRLLAVASLVAASFLTQAADLTVAYQTTVDPAKVAQADGAYEKATKADINWRKFDNGADIIAAIASGDVQIGYLGSSPLTAAITRKVPVETFLIATQIGAAEALVARDGSGIKTPQDLVGKKIAVPFVSTGHYSLLAALKHWNIDPSKVTVLNLAPPAIIAAWKRGDIDATYVWDPALGVAKENGKVLITSGELAKFGAPTFDAWIVRKDFAEKHPEIVTAFAKVTLDAYADYRKDPKAWLANQSNVDKLVKLSGAKASDIPLLLQGNVYPLAADQVSDLGAPTTKAITDTAAFLKDQGKVEAVLPDYAPYVSAKYITN
>NZ_CP048408.1|WP_163973841.1|520693_521488_-|taurine-ABC-transporter-ATP-binding-subunit
MALLQLERISAQYPGSPEPVLSDISLTLGPQQLLVALGPSGSGKTSLLNLIAGFVEPSAGRITLDNVPVKGPSAERGVVFQDDALLPWQDVLANVAFGLELAGVAKDKREQRAREMLALVDLSGFEHRRIWQLSGGQKQRVGLARALAADPRVLLMDEPFGALDAFTREQMQELLLQVWQRTAKPVFLITHDIEEAVFLATDLILLAPNPGQIVERLHLDFGKRYAAGESARSIKSDPRFIETREHVLAKVFSQRNAVQRQERA
>NZ_CP048408.1|WP_064382739.1|519857_520697_-|taurine-ABC-transporter-permease-TauC
MSSYDVSATAVKPAATSVVIPVRRSLSTRWISLLTLFALLVIWWAVTATGLIEPLFLPPPSAVLQKGWLLATTGYMDSTLWQHLGASLSRIGLGLGFAILTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVIWCGIGELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIAATSGLGFMVQSAAQFLVTDVVVLGILVIALIAFAMEMGLRALQRKLVPWHGQAH
>NZ_CP048408.1|WP_163973840.1|518957_519800_-|taurine-dioxygenase
MSSLNITPLSSALGAQISGVDISQPLNLEQRDAIEQALLKYQVLFFRNQPIEPSQQARFAAYFGDLHIHPIYPNVPEQPEVLILDTAVTDVRDNAIWHTDVTFLPTPAMGAVLSAKLLPEFGGDTLWASGIAAYEALSAPMKALLEGLTATHDFTRSFPLERYGNTPQALAQWEAARRKNPPLSHPVIRTHPVSGRRSLFVNEGFTSKINELSETESEAVLKFLFAHATRPEFTIRWRWQKDDIAFWDNRVTQHYAVDDYRPARRVMQRATVLGDVPFFR
>NZ_CP048408.1|WP_039764563.1|517776_518814_+|L-glyceraldehyde-3-phosphate-reductase
MTYTAAENRYDSIPYRRVGRSGLVLPALSLGLWHNFGDSTPIDTQRSLLRTAFDLGINHFDLANNYGPPYGSAEINFGRLLREDFKQYRDELIISSKAGWDMWPGPYGQGGGSRKYVLASLDQSLQRLGLDYVDIFYSHRFDPDTPLEETASALATAVQQGKALYIGISSYSGVKTREIAAFLKEWKVPLLIHQPAYNLLNRWVEKDLLDTTDELGTGVIAFTPLAQGLLTDKYLNGVPADARVNRPGGGSLQASHLSEANIAHVRALNEIAKRRGQSLAQLALAWTLRDPRVTSALIGASRPEQIIENVGALKNLSFSAEELAEIDRFAQEGGINLWEKPSTAE
>NZ_CP048408.1|WP_163973839.1|516417_517737_+|LLM-class-flavin-dependent-oxidoreductase
MSRQLKLGAFLMATGHHVAAWRHPDVPANAGLDFAHYKRLAQIAEAAKFDTLFVADSVAAPTQDIASRMARSDHFEPLTLLSALSAVTEHIGLIATATTSYNEPYHVARKFASLDHLSGGRAGWNLVTSDNAAEAQNFGRDEHIGHAERYSRAREFHQVVTGLWDSWQDDAFIRDKASGAYYHPEKLHVLDHVGEHFRVKGPLNVARSPQGQPVIVQAGSSETGRELAAQTAEVVFTAQTSLASAQAFYADLKGRLPKYGRSADSLKIMPGVFVVVGQTEAEAQEKCETFQQLVEPEVGVALLGRMLGNFDLSKYPLDGPLPELPLTDSGQQSRQKLLTELAGREHLTLAELGRRIAGGRGHYSVVGTPAQIADRLQEWFEQGAADGFNVLVPHLPGGLEDFANGVVPELQRRGLFRTEYEGRTLRQNLGLARPGNRFA
>NZ_CP048408.1|WP_163973838.1|514190_516416_+|TonB-dependent-receptor
MHNIPGATHKLAQSIRAAGWLLTGLAALPLPVAFAADSTDQEPTLKSVTVTATRREESLQKVPVAVSVIDGEQLERDNRNSVASIVQQVPSLNFRTGASNKDTSLFVRGVGTISTSPGVEPTVATVIDGVVYARPGQSTLDLLDLERVEVLRGPQGTLFGKNASAGVLNITSKAPTAETHGYIDQSYYSGNESRTRFGIGGSLIPDTLKGSISTLFGTYDGNVDNQHNGHEVNGYNHRGVRGKLEFTPNDDVTFTLIADYMQSHDDGPNGVVTKALTPAFANALSPVSATSHNRDINTDTRSHVEDTNKGLSGQLDWQLGDYTLTSITAWRGWDNTQYQDGDRLGTVTAAFPGTADKGDLAFDQYSQELRLASPKGEFLEYVGGLFYMHGKDEETYQRTLTTTTRTDRGVADYSTTSDSYAVFGESTLNFTSDLRGIAGLRYTHDDLEYDHRRVSTSATTVSGIQPATRSSGSVDEDGWSGRLGLQYDLSDTVTTYLTYSRGYKGPAYNVFFNMQPRDTEALKPETSNTWEAGIKASSWNNRLTTNLAVFHSDYDNYQANFFDTVAGQVVTRLINAGSVSTEGVELDFALQATQQLKFSGALAYTRARIDEFACPAGAAASCNVNGKPLPFSPDWKSYVRADYTIPLDNGLDIELGTDYSWQSEVQYDISQNADTKQGAYGLWNASVALADYTNGWRVALLGKNLTDKSYSPLLASGGNYIYRAVPRDDERYFGVQLRKDF
>NZ_CP048408.1|WP_039764559.1|512946_513984_-|LacI-family-DNA-binding-transcriptional-regulator
MSEEKPRKRRGAGRVTLNAVARQAGVSAITVSRYFNQPEQVSPERRERIAAVVAELGYVPNLVAGGLASARGKIVGMVIPNISGPIFANTIQGFSDTLSRHGYQLLLASSYFSTEQEENAVRAFLGWSPAALVVTSHFHSAGTEKMLAEADIPVIETWDYQPDREPMQIGFSHFEVGVSAARYLHNKGYRRIAFVQNSAPGDFSALERRDGYAATVRELGLEPWVFAPDADRAPFEAGKQAMEALMNASPRPDAIIFANDNLAAGGLLAGQRAGLKIPEDCAVLGFGDYPFAEMLLPSLSTIKPPALEIGVLAATRVLESLGVLPSDEVQRLNLLQCTVIEREST
>NZ_CP048408.1|WP_007952727.1|512598_512859_-|hypothetical-protein
MHTAIIIFFGLILLALMFYIGERIGFSRQTLAYGFAALWLALTVINGAVGVVHAGQPLGSEIAIGSAVYGVPLAAMVLFMVLSAET
>NZ_CP048408.1|WP_039764556.1|510573_512574_+|BCCT-family-transporter
MSASSTPASGLVRMNPPVFWFAATVILLFGLTVIAMPEQAGAWLLEAQNWAANTVGWYYMLAMTLYLIFVVVTALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHMLQPPQGEAGTADAARQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIGYAVDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQVGLITLMMGAAIIVAVSGVDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNLGDYLGALPMKSFDLYAYDKPSDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWMSIFGNSAIDQVLNHGMSALGMSALDNPSMTLYLLLETYPWSKTVIAVTVFISFVFFVTSADSGTVVLSTLSAKGGNPDEDGPKWLRVFWGAMTALVTSALLFSGSIDALKSAVVLTSLPFSMILLLMMWGLHKAFYLESQKQIAQLHSLAPVSGSRRGKGGWRQRLSQAVHFPSRDEVYRFMDTTVKPAIEEVTAVFAEKGLNVVTQPDPAHDSVSLEIGHGEQHPFIYQVQMRGYFTPSFARGGMGSKQLNNRRYYRAEVHLSEGSQDYDLVGYTKEQIINDILDQYERHMQFLHLVR
>NZ_CP048408.1|WP_163973843.1|522819_524403_-|glutamate--cysteine-ligase
MSELLNRRLALLGERANLSLLEQCLHGIERECLRVTGEGRLAQTPHPEALGSALTNEQITTDYSESLLEFITPALPDPADTLASLDKIHRFAYSKLGNEYLWSPSMPCPLPAEEDIPIAYYGTSNIGQLKYVYRKGLALRYGKTMQCIAGIHYNFSLPEKLWPLLKEAEGFVGTDRDFQSSSYIALIRNFRRYSWLLMYLFGASPALDAGFLRGRSHQLEQLDPDTLYLPYATSLRMSDLGYQSNAQAGLTPCYNDLASYTDSLRQAVATPYAPYVEIGTHQNGEWVQLNTNILQIENEYYSNIRPKRVTYTGERPIQALMARGIQYVEVRCLDINPFLPMGIDLTESRFLDAFLLYCALNESPLLTNNSCGNATSNFLSVVKEGRRPGLQLQRDGQPVELKEWAAELLEKIAPLAALLDQSHGGDAHSKALDAQLAKVKDSSLTPSAQVLAAMAAHKESFAQFSLRQSQAHAEFFRSEPLAADEQAKFEELARSSLAQQAELEQNEVGDFDVFVGSYQASILAISN
>NZ_CP048408.1|WP_163973844.1|524617_525001_-|PaaI-family-thioesterase
MEMPAGLVESAFFKLLGCRLHSLETGVAQVALALEPELRNRGGKLHGGALFSLVDIAMGLACSSTHGFDQQSATIECKINYIRAVSEGEVLCTARVIHPGRRTLVVEADVMQGNKLVAKAQGTFAVL
>NZ_CP048408.1|WP_134333983.1|525000_527325_-|RNA-binding-transcriptional-accessory-protein
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRISILSSIQEQGKLTPELEREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADGLFNDPSLTPETEAARFVNAEKGVADAKAALEGAKYILMERFAEDANLLEKLRTYLKQEATLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVGEELPGTLHPCEGMIGQHVGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAETEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDSTGKLLDHATVYPHVPHNKWDQTIAILAALCAKHSVDLIAIGNGTASRETDKLAIELIKKYPAMKMTKVMVSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARGLDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVAHRDEHGAFKTRAALKKVARLGEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDPKKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQEGVEDLKDLQLGMILEGVVTNVTAFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMSDTPGEKIDGARGSRPGSAPRQSQGSAPRKESTPAAPVNNAMASLFANAKQLKKR
>NZ_CP048408.1|WP_007952694.1|527685_528426_+|two-component-system-response-regulator-OmpR
MSSTAQTAEGEKILIVDDDPGLSSLLERFFVSKGYRARAVPNTEQMDRLLSREVFNLVVLDLMLPGEDGLTACRRLRGANNQIPIIMLTAKGDELSRIKGLELGADDYLAKPFNPDELMARVKAVLRRQAAPVPGAPGSEEENVTFGDYVLSLATRELKRGDEVHMLTTGEFAVLKALVMNARQPLTRDKLMNLARGREWDALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVPDGNSTK
>NZ_CP048408.1|WP_039764576.1|528540_529854_+|HAMP-domain-containing-protein
MKTPVWFPQSFFSRTLWLVLIVVLFSKALTLVYLLMNEDVLVDRQYSHGVALTLRAYWAADEENRAKIADAATLIRVVGAGVPEGEQHWPYSEIYQRQMQAELGADTEVRLRMHSPPALWVRAPSLGDGWLKVPLYPHPLRGQKIWNVLGWFLAIGLLSTASAWIFVSQLNQPLKRLVYAARQLGQGRSVRLPISDTPSEMAEVYRAFNQMAEDVEQAGRERELMLAGVSHDLRTPLTRLRLSLELMGDRTDLTNDMVRDIEDMDAILDQFLAFIRDGRDESVEEVDLSDLVREVAAPYNQSEEKVRLRLEPIQPFPLRRVSMKRLLNNLIGNALNHAGGSVDVAAYVSGDTSAPYVVLSVMDRGAGIAPSELEAIFNPFTRGDRARGGKGTGLGLAIVKRIASMHGGNVELRNRSGGGLEARVRLPLGLMLPRDAV
>NZ_CP048408.1|WP_163973845.1|529937_530843_-|30S-ribosomal-protein-S6--L-glutamate-ligase
MKIAVLSRNPRLYSTRRLVESGTERGHEMVVIDTLRAYMNIASHKPQIHYRGKPLEGFDAVIPRIGASVTFYGCAVLRQFEMMGVFPLNESVAIARSRDKLRSLQLLSRRGIGLPVTGFAHSPDDIPDLIDMVNGAPLVIKVLEGTQGIGVVLCETATAAESVIEAFMGLKQNIMVQEYIKEAGGADIRCFVVGDKVIAAMKRQAKPGEFRSNLHRGGSASLIKITPEERMTALRAAKVMGLAVAGVDILRSNHGPLVMEVNSSPGLEGIETTTGKNVAGIIIEHLEKNGGPNMTRTKGKG
>NZ_CP048408.1|WP_011331964.1|530839_531319_-|ATP-dependent-zinc-protease
MKTFDHLTVIGLREWVALPDLGVAGLRAKIDTGASTSSLHATDIEPFERDGEKWVRFTAHLGTVVQLRHRRCEAPLVARKTIKSSNGQAQVRYVISTTLALGDRVWPIEFTLACRKSMRYRLLLGSKALIDGQLVVNPGIKYVQDKPVFPVSTSSTGVA
>NZ_CP048408.1|WP_163973846.1|531335_532115_-|EAL-domain-containing-protein
MTKFPSSLTSPKSGCLGCQQSEPLGFDFSFAYQPIVDLRDKSMYAYEALVRGVAGEGALTVLDQVTEDNRYRFDQLCRTRAIEGAAELNMQTHLSINFMPNAVYRPELCIRSTLEAARKHNFPIDRLIFETLESEHVDNYRHLTNILREYREFGFKTAIDDFGAGYSGLNLLADFQPDLIKLDMALIRDIDHDRVRQAIVRGIVTICAELDVTVIAEGIESAGERDFLADCGIFLMQGYWFARPAFKALAQVSPEAWTR
>NZ_CP048408.1|WP_011331966.1|532231_532639_+|RNA-binding-protein-S4
MAQKSEEDDKVRLDKWLWAARFFKTRALAKAAIESGKVHCRGERCKPGKEPRIGDEFEIRAGFDEKTVVVQALSIVRRGAPEAQTLYAETEASIAKREAAAAMRKAGALGVTTDGKPSKKQRRDLFKFRGNSSGE
>NZ_CP048408.1|WP_163973847.1|532707_533508_-|phosphatase-PAP2-family-protein
MNNPGLFQSRWNLGRLVLCNVVPLALLAFWLWPTGQMLCVIFDEWLFRSLNAPLASNPIWLHIWAIASLRPFDIVVGLILLTLLIKGDWVFRAIDVRRAFFGFFSILLLMVVIRALFSKFSDHMGWQHSSPSMVLEGAVHISDYFPHLEKTWELKDRSSQSFPGDHASVLLIWALFMGVFSRTAGQFLVIWGLALLFMLPRLVAGAHWGQDDYIGGMLLAVWALGWGYYTPFAYHAANFWLKVTSPVFRLLGKLPVVSRMSVVSAQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1529582 : 1584771

uncultured_Caudovirales_phage(19.05%)

holin,tRNA,tail,protease,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039769652.1\|1529582_1530401_+\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	2.3e-08	33.9
WP_074691290.1\|1530559_1530967_-	SufE family protein	NA	NA	NA	NA
WP_085666849.1\|1530963_1532169_-	cysteine desulfurase	A0A2K9L2Y3	Tupanvirus	3.2e-59	31.2
WP_007954762.1\|1532294_1533329_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_003222107.1\|1533360_1533723_-	ArsC family reductase	NA	NA	NA	NA
WP_039769658.1\|1533905_1535537_+	Na+/H+ antiporter	NA	NA	NA	NA
WP_039769720.1\|1535545_1536274_-	peptidase M12	NA	NA	NA	NA
WP_103386560.1\|1536444_1537644_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA
WP_007954768.1\|1537687_1540390_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA
WP_039769663.1\|1540430_1541213_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_008052780.1\|1541587_1542325_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_064593783.1\|1542515_1543379_+	elongation factor Ts	NA	NA	NA	NA
WP_011332683.1\|1543590_1544334_+	UMP kinase	NA	NA	NA	NA
WP_011332684.1\|1544330_1544888_+	ribosome recycling factor	NA	NA	NA	NA
WP_007954779.1\|1544902_1545658_+	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	1.1e-17	38.1
WP_039769669.1\|1545657_1546464_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_039769671.1\|1546460_1547651_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_039769673.1\|1547704_1549057_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_074691300.1\|1549131_1551522_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_003222140.1\|1551567_1552071_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_039769677.1\|1552074_1553130_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_003222142.1\|1553236_1553677_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_039769679.1\|1553673_1554450_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_039769681.1\|1554452_1555583_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_163976805.1\|1555594_1556221_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.7e-27	38.9
WP_085748115.1\|1556297_1559819_+	DNA polymerase III subunit alpha	A0A1C9LWZ5	Streptomyces_phage	3.2e-200	37.0
WP_011332694.1\|1559958_1560906_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_163974103.1\|1561039_1562368_+\|tRNA	tRNA lysidine(34) synthetase TilS	A7IXR9	Paramecium_bursaria_Chlorella_virus	8.5e-05	23.7
WP_011332696.1\|1562642_1564274_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.4e-158	53.5
WP_007954807.1\|1564279_1565125_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	6.1e-49	42.4
WP_007954808.1\|1565281_1566571_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	6.9e-137	59.2
WP_003222158.1\|1566742_1567021_+	cell division protein FtsB	NA	NA	NA	NA
WP_085666847.1\|1567017_1567725_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_007954817.1\|1567721_1568618_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_103386552.1\|1568734_1569847_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	2.8e-33	29.8
WP_039769689.1\|1569902_1570757_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_074691309.1\|1571056_1571530_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_163974104.1\|1571526_1572585_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_039769691.1\|1572572_1573322_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.5e-67	52.6
WP_007954826.1\|1573321_1573999_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.1e-43	50.2
WP_074691311.1\|1574210_1575092_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	6.6e-06	33.3
WP_007954831.1\|1575198_1576206_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.0e-34	35.8
WP_007908827.1\|1576718_1577042_-	ferredoxin family protein	NA	NA	NA	NA
WP_039771222.1\|1577205_1579788_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.1e-27	22.6
WP_085666844.1\|1579997_1580732_+	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	3.8e-132	95.1
WP_085647806.1\|1581254_1581593_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	3.7e-50	88.2
WP_163974105.1\|1581666_1582188_+	hypothetical protein	NA	NA	NA	NA
WP_039771230.1\|1582191_1582800_+\|plate	phage baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	2.5e-36	56.7
WP_074691315.1\|1582814_1583147_+\|plate	phage baseplate protein	A0A2H4JI46	uncultured_Caudovirales_phage	1.6e-37	70.0
WP_039771232.1\|1583143_1584139_+\|plate	baseplate J protein	A0A2H4JC04	uncultured_Caudovirales_phage	1.1e-110	62.6
WP_074691319.1\|1584135_1584771_+\|tail	phage tail protein I	A0A2H4JDK0	uncultured_Caudovirales_phage	3.1e-45	52.5

DBSCAN-SWA_2

1588033 : 1638529

Pseudomonas_phage(65.71%)

tRNA,tail,plate,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163974106.1\|1588033_1588543_+	DUF4376 domain-containing protein	A0A1S5R1J2	Pseudomonas_phage	5.5e-21	49.0
WP_039771239.1\|1588643_1588829_+	hypothetical protein	NA	NA	NA	NA
WP_074691321.1\|1588831_1589998_+\|tail	phage tail protein	B0ZSG8	Halomonas_phage	4.7e-124	56.7
WP_074691323.1\|1589997_1590504_+\|tail	phage tail protein	Q6R4W3	Vibrio_virus	1.6e-25	37.5
WP_163974107.1\|1590584_1591166_+\|tail	phage tail assembly protein	B0ZSH0	Halomonas_phage	1.6e-24	35.3
WP_163974108.1\|1591294_1593523_+\|tail	phage tail tape measure protein	A0A0R6PIJ6	Moraxella_phage	1.0e-18	29.9
WP_007954886.1\|1593519_1593903_+\|tail	phage tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	6.6e-35	52.0
WP_039771248.1\|1593895_1594108_+\|tail	tail protein	A0A2H4JGD9	uncultured_Caudovirales_phage	2.1e-19	65.7
WP_163974109.1\|1594117_1595146_+	phage late control D family protein	B0ZSH3	Halomonas_phage	1.1e-95	51.3
WP_074691331.1\|1595207_1595792_+	hypothetical protein	B5TK65	Pseudomonas_phage	1.6e-80	75.8
WP_039771254.1\|1595788_1595968_+	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	8.1e-20	81.7
WP_103386539.1\|1595967_1597464_+\|tail	phage tail protein	B5TK67	Pseudomonas_phage	6.4e-259	91.4
WP_007908779.1\|1597531_1597879_+\|tail	phage tail protein	B5TK68	Pseudomonas_phage	3.8e-58	93.9
WP_003222226.1\|1597875_1598172_+\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	2.8e-41	90.8
WP_163974110.1\|1598302_1600075_+\|tail	phage tail protein	B5TK70	Pseudomonas_phage	9.1e-71	60.6
WP_039771262.1\|1600061_1601297_+	2-hydroxyacid dehydrogenase	B5TK71	Pseudomonas_phage	4.6e-170	71.8
WP_163974111.1\|1601300_1602344_+\|plate	baseplate protein	B5TK72	Pseudomonas_phage	4.9e-157	79.1
WP_011332728.1\|1602371_1602881_+\|plate	phage baseplate assembly protein	B5TK73	Pseudomonas_phage	6.4e-78	86.4
WP_007954906.1\|1602880_1603279_+	hypothetical protein	B5TK74	Pseudomonas_phage	1.2e-68	94.7
WP_039771268.1\|1603268_1604312_+\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	2.9e-157	81.5
WP_039771270.1\|1604299_1604899_+	DUF2313 domain-containing protein	B5TK76	Pseudomonas_phage	1.6e-104	91.0
WP_039771272.1\|1604913_1605645_+	hypothetical protein	B5TK77	Pseudomonas_phage	7.6e-24	70.9
WP_163974112.1\|1605646_1606072_+\|tail	phage tail protein	NA	NA	NA	NA
WP_074691339.1\|1606127_1607222_+\|tail	phage tail protein	B5TK79	Pseudomonas_phage	3.4e-161	75.8
WP_163974113.1\|1607229_1607796_+\|tail	tail fiber assembly protein	B5TK80	Pseudomonas_phage	4.0e-73	67.6
WP_163974114.1\|1607818_1608745_+	hypothetical protein	B5TK77	Pseudomonas_phage	3.8e-20	72.7
WP_163974115.1\|1608744_1609212_+	hypothetical protein	A0A291LAV4	Bordetella_phage	1.4e-10	49.3
WP_163974116.1\|1609253_1610141_+\|tail	phage tail protein	B5TK81	Pseudomonas_phage	4.3e-37	38.9
WP_163974117.1\|1610141_1610588_+	hypothetical protein	B5TK82	Pseudomonas_phage	3.0e-23	41.7
WP_074691350.1\|1610606_1611809_+	carbohydrate-binding protein CenC	B5TK77	Pseudomonas_phage	3.8e-20	68.1
WP_039771290.1\|1611820_1612063_+	hypothetical protein	NA	NA	NA	NA
WP_163974118.1\|1612119_1612683_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	1.4e-86	81.7
WP_163974119.1\|1612664_1613195_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	1.1e-59	75.3
WP_085612333.1\|1613263_1613764_+	CinA family protein	B5TK85	Pseudomonas_phage	8.5e-75	88.0
WP_003222269.1\|1613847_1614906_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	4.5e-110	58.9
WP_039771298.1\|1614914_1615385_+	recombination regulator RecX	NA	NA	NA	NA
WP_163974120.1\|1615465_1616584_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_074691361.1\|1616936_1617131_+	hypothetical protein	NA	NA	NA	NA
WP_011332746.1\|1617131_1617557_-	hypothetical protein	NA	NA	NA	NA
WP_163974121.1\|1617746_1618490_+	DTW domain-containing protein	NA	NA	NA	NA
WP_103386528.1\|1618714_1619365_+	response regulator transcription factor	NA	NA	NA	NA
WP_039771303.1\|1619440_1619803_+	diacylglycerol kinase	NA	NA	NA	NA
WP_007954941.1\|1619799_1620726_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003222277.1\|1620870_1621650_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_074691365.1\|1621775_1622483_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_163974122.1\|1622586_1623357_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_103386527.1\|1623481_1623949_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.0e-37	52.0
WP_163974123.1\|1624023_1624734_-	RNA-binding protein	NA	NA	NA	NA
WP_064593881.1\|1624817_1625291_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_039771314.1\|1625402_1626740_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_085647831.1\|1627027_1628929_+	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	3.1e-77	34.1
WP_039771318.1\|1628994_1629321_-	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_074691372.1\|1629881_1631177_-	virulence factor family protein	NA	NA	NA	NA
WP_039771320.1\|1631176_1633816_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_039771321.1\|1634733_1635795_+	DNA polymerase IV	NA	NA	NA	NA
WP_039771323.1\|1635842_1636796_-	hypothetical protein	NA	NA	NA	NA
WP_039771325.1\|1636813_1638529_-\|tRNA	proline--tRNA ligase	A0A2K9L0T2	Tupanvirus	6.9e-07	25.4

DBSCAN-SWA_3

1811555 : 1857136

uncultured_Caudovirales_phage(50.0%)

terminase,portal,tail,lysis,head,protease,capsid,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163974163.1\|1811555_1813004_+\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	3.5e-28	30.8
WP_163974164.1\|1813082_1814516_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_007958011.1\|1814613_1814853_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_039772670.1\|1814885_1815956_+	AI-2E family transporter	NA	NA	NA	NA
WP_163974165.1\|1815990_1816464_-	peroxiredoxin	NA	NA	NA	NA
WP_163974166.1\|1816474_1817035_-	glycine cleavage system protein R	NA	NA	NA	NA
WP_007958015.1\|1817348_1818227_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_011332910.1\|1818244_1819360_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_011332911.1\|1819364_1820126_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_007958019.1\|1820154_1820868_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3HWF9	Synechococcus_phage	2.0e-40	37.1
WP_163974167.1\|1821242_1821992_+	restriction endonuclease	NA	NA	NA	NA
WP_163974168.1\|1822079_1823315_-	DUF3596 domain-containing protein	A0A2H4JGM5	uncultured_Caudovirales_phage	5.2e-57	37.3
WP_095049224.1\|1823311_1823527_-	DUF1233 family excisionase	NA	NA	NA	NA
WP_095049225.1\|1824023_1824566_-	phosphohydrolase	A0A2D1GNL9	Pseudomonas_phage	3.8e-28	44.4
WP_163974169.1\|1824562_1824982_-	hypothetical protein	NA	NA	NA	NA
WP_163974170.1\|1825040_1825358_-	transcriptional regulator	NA	NA	NA	NA
WP_163974171.1\|1825516_1825801_-	DNA-binding protein	NA	NA	NA	NA
WP_163974172.1\|1825811_1826402_-	hypothetical protein	NA	NA	NA	NA
WP_163974173.1\|1826776_1828093_+	hypothetical protein	NA	NA	NA	NA
WP_163974174.1\|1828137_1828785_-	XRE family transcriptional regulator	A0A0M3LSL8	Mannheimia_phage	1.4e-13	41.4
WP_163974175.1\|1828883_1829114_+	hypothetical protein	NA	NA	NA	NA
WP_163974176.1\|1829445_1829964_+	hypothetical protein	NA	NA	NA	NA
WP_163974177.1\|1829956_1830184_+	TraR/DksA family transcriptional regulator	A2I309	Vibrio_virus	4.5e-07	43.2
WP_163974178.1\|1830173_1832390_+	conjugal transfer protein TraC	A0A2D1GN57	Marinobacter_phage	1.1e-190	46.8
WP_163974179.1\|1832382_1832742_+	hypothetical protein	NA	NA	NA	NA
WP_163974180.1\|1833256_1833634_-	hypothetical protein	NA	NA	NA	NA
WP_163974181.1\|1834174_1834699_+\|terminase	terminase small subunit	A0A2D1GMW4	Marinobacter_phage	8.2e-20	38.5
WP_163976810.1\|1834742_1836632_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	6.3e-171	49.6
WP_163974182.1\|1836642_1836858_+	hypothetical protein	NA	NA	NA	NA
WP_163974183.1\|1836860_1838468_+\|portal	phage portal protein	A0A067ZJA4	Vibrio_phage	6.1e-98	42.8
WP_163974184.1\|1838470_1839703_+	S49 family peptidase	A0A2H4EXF7	Aeromonas_phage	2.9e-47	44.9
WP_163974185.1\|1839715_1840066_+\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	1.3e-10	41.2
WP_163974186.1\|1840078_1841113_+\|capsid	major capsid protein	A0A0C5ABI0	Bacteriophage	5.1e-74	43.9
WP_163974187.1\|1841114_1841327_+	hypothetical protein	NA	NA	NA	NA
WP_163976812.1\|1841329_1841644_+	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	9.2e-27	53.3
WP_163974188.1\|1841640_1842297_+	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	6.1e-81	68.7
WP_163974189.1\|1842298_1842820_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.1e-53	59.1
WP_163976813.1\|1842852_1843404_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	3.7e-47	67.4
WP_163973701.1\|1843459_1843693_+	hypothetical protein	NA	NA	NA	NA
WP_163974190.1\|1843698_1844025_+\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	6.8e-33	62.3
WP_163974191.1\|1844021_1844906_+\|plate	baseplate assembly protein	A0A2H4JFK9	uncultured_Caudovirales_phage	3.2e-109	69.4
WP_163974192.1\|1844906_1845512_+\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	7.3e-81	72.7
WP_163974193.1\|1846884_1847277_+	hypothetical protein	NA	NA	NA	NA
WP_163974194.1\|1847381_1848548_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	1.2e-172	79.2
WP_163974195.1\|1848560_1849064_+\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	8.6e-67	72.5
WP_163974196.1\|1849075_1849390_+\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	1.2e-21	55.9
WP_163974198.1\|1849546_1851991_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	1.7e-96	36.9
WP_163974200.1\|1852000_1852846_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	5.6e-111	70.4
WP_163974202.1\|1852820_1853027_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.9e-21	71.6
WP_163974204.1\|1853115_1853436_+	hypothetical protein	NA	NA	NA	NA
WP_163974206.1\|1853495_1854545_+	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	9.6e-153	77.5
WP_163974208.1\|1854575_1855139_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	2.7e-77	77.0
WP_163974210.1\|1855120_1855684_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	1.9e-51	64.0
WP_163974212.1\|1855733_1856168_-	hypothetical protein	NA	NA	NA	NA
WP_163974214.1\|1856341_1857136_+	DNA adenine methylase	C7BGE1	Burkholderia_phage	1.9e-100	64.7

DBSCAN-SWA_4

3382771 : 3415283

Bodo_saltans_virus(33.33%)

protease,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039768315.1\|3382771_3384238_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_158248857.1\|3384331_3384754_+\|protease	AprI/Inh family metalloprotease inhibitor	NA	NA	NA	NA
WP_039768317.1\|3384912_3386700_+	type I secretion system permease/ATPase	A0A2H4UU96	Bodo_saltans_virus	2.9e-16	27.1
WP_163975168.1\|3386696_3388046_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_163975170.1\|3388048_3389410_+	TolC family outer membrane protein	NA	NA	NA	NA
WP_163975172.1\|3389662_3392614_+	autotransporter domain-containing protein	NA	NA	NA	NA
WP_163975174.1\|3392816_3395903_+	autotransporter domain-containing protein	NA	NA	NA	NA
WP_163975176.1\|3395960_3397649_+	polyurethanase	NA	NA	NA	NA
WP_163975178.1\|3397749_3399603_+	polyurethanase	NA	NA	NA	NA
WP_163976850.1\|3399688_3400048_-	hypothetical protein	NA	NA	NA	NA
WP_163975180.1\|3400308_3400896_-	hypothetical protein	NA	NA	NA	NA
WP_163975182.1\|3400892_3405413_-	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	2.9e-28	37.7
WP_163975183.1\|3405455_3405884_-	DUF1795 domain-containing protein	NA	NA	NA	NA
WP_163975185.1\|3405903_3407841_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.8e-30	26.3
WP_039768332.1\|3407922_3408435_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_163975187.1\|3408541_3409390_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_163975188.1\|3409382_3410729_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_163975190.1\|3410766_3412116_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_163975192.1\|3412112_3413132_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_039768337.1\|3413095_3414862_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_039768339.1\|3414869_3415283_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_5

4119496 : 4175004

Bacillus_phage(33.33%)

holin,protease,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163975686.1\|4119496_4121146_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.4e-59	31.8
WP_085667575.1\|4121227_4122850_+	MHS family MFS transporter	NA	NA	NA	NA
WP_074688734.1\|4122899_4123268_-	DUF427 domain-containing protein	NA	NA	NA	NA
WP_039767090.1\|4123439_4124654_+	MFS transporter	NA	NA	NA	NA
WP_163975688.1\|4124748_4126155_-\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_039767094.1\|4126433_4128377_+	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	9.4e-29	30.8
WP_163975690.1\|4128424_4128928_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_134333907.1\|4128940_4129312_-	hypothetical protein	NA	NA	NA	NA
WP_047293552.1\|4129439_4129769_+	hypothetical protein	NA	NA	NA	NA
WP_163975691.1\|4129840_4130719_-	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	5.6e-13	22.9
WP_011334741.1\|4130838_4131303_+	cyanase	NA	NA	NA	NA
WP_039767100.1\|4131386_4131623_+	DUF2790 domain-containing protein	NA	NA	NA	NA
WP_039767103.1\|4131634_4132294_+	carbonic anhydrase	NA	NA	NA	NA
WP_163975693.1\|4132342_4133845_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_011334745.1\|4133914_4134823_-	glutaminase B	NA	NA	NA	NA
WP_074688746.1\|4135064_4135268_+	hypothetical protein	NA	NA	NA	NA
WP_074688748.1\|4135325_4135841_+	DoxX family protein	NA	NA	NA	NA
WP_074688750.1\|4135844_4137458_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_011334749.1\|4137609_4138323_+	murein L,D-transpeptidase catalytic domain family protein	NA	NA	NA	NA
WP_064597487.1\|4138470_4138728_+	DUF2790 domain-containing protein	NA	NA	NA	NA
WP_007950581.1\|4138740_4139412_+	heavy metal response regulator transcription factor	W8CYM9	Bacillus_phage	2.7e-36	36.2
WP_163975695.1\|4139408_4140815_+	heavy metal sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	9.0e-05	21.4
WP_163975696.1\|4140902_4141523_-	cell wall hydrolase	A0A192Y8L1	Salmonella_phage	1.3e-16	41.6
WP_064597492.1\|4141722_4142574_+	CAP domain-containing protein	A0A0E3JT82	Bacillus_phage	2.3e-16	38.9
WP_007950587.1\|4142657_4142813_-	DUF2474 domain-containing protein	NA	NA	NA	NA
WP_163975698.1\|4142799_4143816_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_163975700.1\|4143833_4145249_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_163975702.1\|4145358_4147683_-	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_039767130.1\|4148039_4149038_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_134333898.1\|4149067_4149967_+	bestrophin	NA	NA	NA	NA
WP_074688763.1\|4150001_4151288_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	3.1e-12	24.3
WP_011334763.1\|4151288_4151996_-	response regulator	NA	NA	NA	NA
WP_039767136.1\|4152136_4152745_-\|tRNA	tRNA hydroxylase	NA	NA	NA	NA
WP_007958823.1\|4152904_4153768_+	universal stress protein	NA	NA	NA	NA
WP_039767141.1\|4153810_4154281_-	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_039767143.1\|4154750_4157360_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_039767145.1\|4157660_4158941_-	HAAAP family serine/threonine permease	NA	NA	NA	NA
WP_085667572.1\|4159418_4159613_-	hypothetical protein	NA	NA	NA	NA
WP_007958838.1\|4159887_4160271_+	tautomerase family protein	NA	NA	NA	NA
WP_039767151.1\|4160443_4161412_+	2-hydroxyacid dehydrogenase	M1H3H9	Paramecium_bursaria_Chlorella_virus	3.6e-13	27.1
WP_039767153.1\|4161408_4162497_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_163975704.1\|4162493_4166315_-	type VI secretion system protein ImpL	NA	NA	NA	NA
WP_039767158.1\|4166311_4167076_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_163975706.1\|4167094_4168426_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_039767163.1\|4168472_4168919_-	hypothetical protein	NA	NA	NA	NA
WP_007958861.1\|4169147_4169690_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_039767165.1\|4169719_4171204_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_025111453.1\|4171281_4171779_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_163975708.1\|4171794_4172238_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_039767171.1\|4172221_4174015_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_163975710.1\|4173978_4175004_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_6

4288270 : 4294459

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074689306.1\|4288270_4288663_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.1e-52	78.3
WP_085667539.1\|4288664_4289021_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	2.2e-37	65.8
WP_163975822.1\|4289020_4289314_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	3.4e-31	68.7
WP_007958196.1\|4289310_4289646_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.6e-45	81.1
WP_163975823.1\|4289642_4290644_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	2.2e-162	85.1
WP_074688934.1\|4290736_4291738_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_074688936.1\|4291783_4293178_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_074688938.1\|4293178_4294459_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	9.7e-99	53.9

DBSCAN-SWA_7

4398378 : 4432972

Rous_sarcoma_virus(20.0%)

protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163975866.1\|4398378_4399350_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_163975868.1\|4399346_4401704_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_039767533.1\|4401788_4402571_-	molecular chaperone	NA	NA	NA	NA
WP_039767535.1\|4402595_4403096_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_039767536.1\|4403100_4403637_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_134333876.1\|4403657_4404191_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_039767541.1\|4404292_4404802_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_163975870.1\|4405089_4406223_+	cell division protein ZapE	NA	NA	NA	NA
WP_163975872.1\|4406285_4407599_+	serine/threonine-protein kinase	Q86363	Rous_sarcoma_virus	4.9e-05	24.3
WP_011335021.1\|4407637_4408342_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_074689030.1\|4408562_4409969_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_039767547.1\|4409972_4411364_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_074689034.1\|4411436_4412762_-	MFS transporter	NA	NA	NA	NA
WP_163975874.1\|4413032_4413905_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_163975876.1\|4413959_4414820_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_074689039.1\|4414933_4416043_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_163975878.1\|4416100_4416928_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_085667504.1\|4417125_4417680_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	3.4e-16	39.6
WP_163975880.1\|4417676_4418585_-	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_163975882.1\|4418626_4420666_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_163975884.1\|4420871_4422002_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_163975886.1\|4422005_4423046_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_039767568.1\|4423367_4424225_-	DUF2242 domain-containing protein	NA	NA	NA	NA
WP_163975888.1\|4424317_4425217_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_163975890.1\|4425339_4426545_+	MFS transporter	NA	NA	NA	NA
WP_074689054.1\|4426605_4428477_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_002552737.1\|4428708_4428981_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.4e-18	58.4
WP_039767614.1\|4429129_4431526_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.3e-221	52.0
WP_007951558.1\|4431688_4432972_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.1e-138	59.7

DBSCAN-SWA_8

6087706 : 6137529

Tupanvirus(33.33%)

holin,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007959815.1\|6087706_6088210_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_039768022.1\|6088475_6089363_+	acyltransferase	NA	NA	NA	NA
WP_039768021.1\|6089364_6089922_-	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_092163889.1\|6090216_6090492_+	hypothetical protein	NA	NA	NA	NA
WP_011336270.1\|6090546_6091746_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	2.5e-11	28.9
WP_007959808.1\|6091876_6092734_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_039768018.1\|6092747_6093380_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_163976664.1\|6093527_6096545_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_011336273.1\|6096541_6096871_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_003206307.1\|6096884_6098135_-	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_011336274.1\|6098155_6099409_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.7e-100	53.0
WP_163976666.1\|6099565_6100276_-	conjugal transfer protein TraX	NA	NA	NA	NA
WP_039768015.1\|6100404_6101445_+	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_074692140.1\|6101769_6102303_+\|transposase	transposase	NA	NA	NA	NA
WP_163976668.1\|6102755_6103580_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_011336281.1\|6103808_6104909_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_039768012.1\|6105202_6106495_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_163976670.1\|6106612_6107857_-	metallophosphoesterase	NA	NA	NA	NA
WP_163976672.1\|6107882_6109751_-	hypothetical protein	NA	NA	NA	NA
WP_163976674.1\|6109899_6113352_-	FAD-binding protein	NA	NA	NA	NA
WP_039768008.1\|6114537_6115308_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_007959785.1\|6115317_6116538_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_163976676.1\|6116537_6118487_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_011336289.1\|6118598_6120659_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_163976679.1\|6120674_6121205_-	hydrocarbon binding protein	NA	NA	NA	NA
WP_039768004.1\|6121282_6122260_-	membrane dipeptidase	NA	NA	NA	NA
WP_039768003.1\|6122494_6122896_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_007959772.1\|6122943_6123360_+	DUF3010 family protein	NA	NA	NA	NA
WP_074692118.1\|6123360_6124533_-	hypothetical protein	NA	NA	NA	NA
WP_011336294.1\|6124601_6125546_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_039768001.1\|6125739_6126684_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_039768000.1\|6126759_6127647_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_103385380.1\|6127717_6128683_+	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_163976681.1\|6128823_6129300_+	thioesterase	NA	NA	NA	NA
WP_039767997.1\|6129324_6130488_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA
WP_007959758.1\|6130761_6131022_+	hypothetical protein	NA	NA	NA	NA
WP_011336300.1\|6131096_6132200_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_039767995.1\|6132670_6134047_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_039767994.1\|6134481_6135432_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_039767993.1\|6135508_6136354_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_011336304.1\|6136350_6137529_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-25	37.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage