CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048429	Paenibacillus jilunlii strain KACC 16679 chromosome, complete genome	34 crisprs	csa3,RT,cas3,DinG,WYL,DEDDh	5	11	7	0

1. NZ_CP048429

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048429_1

• CRISPR_ID: NZ_CP048429_1
• CRISPR_location: 68234-68307
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_1

Consensus_repeat	Method
AAGTGGAAAAAGGGTAACTAATT	CRISPRCasFinder

spacers of NZ_CP048429_1

>1.1|68257|28|NZ_CP048429|CRISPRCasFinder
TGCCCGATTCCCCTGTTCTCCACAGGTT

CRISPR arrays and Neighbor proteins around NZ_CP048429_1

CRISPR arrays

The CRISPR arrays of NZ_CP048429_1

>merge|NZ_CP048429|1|68234-68307|CRISPRCasFinder
AAGTGGAAAAAGGGTAACTAATTTGCCCGATTCCCCTGTTCTCCACAGGTTAAGTGGAAAAAGGATAACTAATT

>NZ_CP048429|1|1|68234-68307|CRISPRCasFinder
AAGTGGAAAAAGGGTAACTAATT	TGCCCGATTCCCCTGTTCTCCACAGGTT
AAGTGGAAAAAGGATAACTAATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062527143.1|73345_74104_-|response-regulator	unknown	unknown	gnl|CDD|227095
NZ_CP048429.1|WP_062527164.1|54799_56467_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270300
NZ_CP048429.1|WP_062527145.1|72023_73169_+|xylanase	unknown	unknown	gnl|CDD|225940
NZ_CP048429.1|WP_163704262.1|69960_71802_-|family-43-glycosylhydrolase	unknown	unknown	gnl|CDD|350139
NZ_CP048429.1|WP_062527141.1|74100_75846_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519
NZ_CP048429.1|WP_062527160.1|61365_62325_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381389
NZ_CP048429.1|WP_062527134.1|79681_80488_-|hypothetical-protein	unknown	unknown	gnl|CDD|376614
NZ_CP048429.1|WP_062527794.1|58055_60302_-|glycoside-hydrolase-family-95-protein	unknown	unknown	gnl|CDD|379625
NZ_CP048429.1|WP_163704258.1|57302_57509_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062527153.1|64297_66724_-|DUF5110-domain-containing-protein	unknown	unknown	gnl|CDD|269877
NZ_CP048429.1|WP_074648158.1|68516_69944_-|family-43-glycosylhydrolase	unknown	unknown	gnl|CDD|350132
NZ_CP048429.1|WP_062527156.1|63314_64184_+|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225117
NZ_CP048429.1|WP_062527158.1|62343_63183_-|amidohydrolase-family-protein	unknown	unknown	gnl|CDD|226145
NZ_CP048429.1|WP_062527137.1|77624_78506_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP048429.1|WP_062527162.1|60343_61363_-|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|176222
NZ_CP048429.1|WP_062527139.1|75946_77560_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270300
NZ_CP048429.1|WP_062527135.1|78523_79498_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
NZ_CP048429.1|WP_143013406.1|53714_54701_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
NZ_CP048429.1|WP_039833155.1|80515_81409_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP048429.1|WP_163704260.1|66844_67741_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|225117

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062527143.1|73345_74104_-|response-regulator	gnl|CDD|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	5.92206e-47
NZ_CP048429.1|WP_062527164.1|54799_56467_-|extracellular-solute-binding-protein	gnl|CDD|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	6.60296e-158
NZ_CP048429.1|WP_062527145.1|72023_73169_+|xylanase	gnl|CDD|225940	COG3405, CelA, Endoglucanase Y [Carbohydrate transport and metabolism].	2.52097e-91
NZ_CP048429.1|WP_163704262.1|69960_71802_-|family-43-glycosylhydrolase	gnl|CDD|350139	cd18818, GH43_GbtXyl43B-like, Glycosyl hydrolase family 43 such as Geobacillus thermoleovorans IT-08 beta-xylosidase/exo-xylanase (GbtXyl43B). This glycosyl hydrolase family 43 (GH43) subgroup includes the characterized enzymes Geobacillus thermoleovorans IT-08 beta-xylosidase (EC 3.2.1.37) / exo-xylanase (GbtXyl43B), and Paenibacillus sp. strain E18 alpha-L-arabinofuranosidase (EC 3.2.1.55) Abf43B. It belongs to the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	2.80972e-141
NZ_CP048429.1|WP_062527141.1|74100_75846_-|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	4.78689e-47
NZ_CP048429.1|WP_062527160.1|61365_62325_-|aldo/keto-reductase	gnl|CDD|381389	cd19163, AKR_galDH, L-galactose dehydrogenase (L-galDH) and similar proteins. L-galDH (EC 1.1.1.316), also called L-galactose 1-dehydrogenase, catalyzes the oxidation of L-galactose to L-galactono-1,4-lactone in the presence of NAD(+). It uses NAD(+) as a hydrogen acceptor much more efficiently than NADP(+).	1.5395e-166
NZ_CP048429.1|WP_062527134.1|79681_80488_-|hypothetical-protein	gnl|CDD|376614	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologs. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.	7.48466e-30
NZ_CP048429.1|WP_062527794.1|58055_60302_-|glycoside-hydrolase-family-95-protein	gnl|CDD|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	1.19063e-83
NZ_CP048429.1|WP_062527153.1|64297_66724_-|DUF5110-domain-containing-protein	gnl|CDD|269877	cd06591, GH31_xylosidase_XylS, xylosidase XylS-like. XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.	1.98779e-164
NZ_CP048429.1|WP_074648158.1|68516_69944_-|family-43-glycosylhydrolase	gnl|CDD|350132	cd18620, GH43_XylA-like, Glycosyl hydrolase family 43-like protein such as Clostridium stercorarium alpha-L-arabinofuranosidase XylA. This glycosyl hydrolase family 43 (GH43) subgroup belongs to the GH43_AXH-like subgroup which includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), alpha-1,2-L-arabinofuranosidase 43A (arabinan-specific; EC 3.2.1.-), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. The GH43_XylA-like subgroup includes Clostridium stercorarium alpha-L-arabinofuranosidase XylA, and enzymes that have been annotated as having beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase (EC 3.2.1.-) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan.	3.62891e-139
NZ_CP048429.1|WP_062527156.1|63314_64184_+|AraC-family-transcriptional-regulator	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	4.11661e-28
NZ_CP048429.1|WP_062527158.1|62343_63183_-|amidohydrolase-family-protein	gnl|CDD|226145	COG3618, COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only].	6.73184e-64
NZ_CP048429.1|WP_062527137.1|77624_78506_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.92028e-55
NZ_CP048429.1|WP_062527162.1|60343_61363_-|zinc-binding-alcohol-dehydrogenase-family-protein	gnl|CDD|176222	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.23893e-175
NZ_CP048429.1|WP_062527139.1|75946_77560_-|extracellular-solute-binding-protein	gnl|CDD|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	3.97459e-54
NZ_CP048429.1|WP_062527135.1|78523_79498_-|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	8.79695e-117
NZ_CP048429.1|WP_143013406.1|53714_54701_-|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.27153e-128
NZ_CP048429.1|WP_039833155.1|80515_81409_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.27568e-57
NZ_CP048429.1|WP_163704260.1|66844_67741_+|helix-turn-helix-domain-containing-protein	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.74433e-25

Protein sequences

>NZ_CP048429.1|WP_163704260.1|66844_67741_+|helix-turn-helix-domain-containing-protein
MMYEHRYREVKLHGQPEFPLHIYQVEHPASVHSILPVHWHNEMEIIYLARGTAAFTIENRESAIQAGEALIVHPGELHSGIGTACDGTCYYSIVFKLSWLSSPQSDRIQELFFEPILQGTARLPALLSAADEVHSKLLHCVRELLDRYERQSTAYEMSMKGLLLQFIADIYQYGLMESSNVPGSRHGREYNRQIKQVLAYMEAHSSEKLELDQLASVVSLSRSHFCTFFKTLTGMRPMEYLNYIRINKAASLLRSGSYNVLEAALESGYQHVSYFSKWFKFYMNMTPSDYKARYSTGL
>NZ_CP048429.1|WP_062527153.1|64297_66724_-|DUF5110-domain-containing-protein
MKLKDVHSGSGGVRLETTEGIMHIAFSTPGIARIRYTLDSELSRKESLVVVSHPEAGGIQWTVADHPGHLEISTALLTIQVDKLTCAFSYWDANGKLLTKEPSRGGKTLERTEVYRTVFDAAADKVETGQGADGLRARAEGINRRLDRQAYHTKLEFEWQEDEALYGLGSHEEGMMNLRGRHQYLYQQNMKAVVPVLVSTRGYGILIDSCSYMTFHDDAFGSYLWTDVDEEMDYYVIYGPEFDQIIAGIRHLTGDAPMLPKWSFGYVQSKERYISQEELIATVQEYRDRSLPLDCIVLDWQSWPGNLWGQKTFDPGRFPDPPQMMHSLHAMNAKLMVSIWPIMAAGGDNHQEMSGRGFLLGNQATYDAFREEARELYWKQANTGLFSHGIDAWWCDCTEPFEADWNGAVKPEPEQRMLINTAESKRYLDPGLINAYSLLHSKGIYEGQRAADTVKRVVNLTRSAFAGQHRYGTITWSGDIAANWGTLRKQIADGLNFCVTGSPYWTLDIGAFFVRNLKEQWFWNGDYDEGVADLGYRELYVRWFQLGAFLPMFRSHGTDTPRELWRFGEEGELMYDTLVKYLKLRYKLMPYIYSMAGAVAHRKYTMLRALAFDYREDVRVHNIDDQFMFGPAFLVAPVTTAMYYGPGSRELQGIGKLRSVYLPAGEWYDYWSDERTQGGLTIEAKADLETLPLFVRAGSIVPLGPDVQYADEQPEAMIVLKVYSGKDASYTLYEDEGDNYNYENGSYTTIEMKWSEADRTLTIGKRSGSYTGMPAERQFAVEITGIAGRCIVSYQGEPVAVREKDLKS
>NZ_CP048429.1|WP_062527156.1|63314_64184_+|AraC-family-transcriptional-regulator
MKPIRKVFDNELPFSLLLDYKETKSPQRELPDHQHHWYEFVYVYRGKGTFFIDQTFYEMRQGDVIVVPGNTVHRGFPDKEEPVTSSAVFFSPDLIHNHAFSEAYAYLKLFDAAKKNKQYKYSLPPEHAQIVESDIGAIHVEWEQRRPDGGQAMALLLHLALLHLNRYCLPQAAEPGAPNALVPDWFREALAYINDHLDRPLELGALAKRAAVSPAHFSRVFKQRLGMNATDYISTKRIFAAKDGLLQSNDKIEHIAMACGFESMPHFYRTFKKYTDMTPAAYRKGNRPH
>NZ_CP048429.1|WP_062527158.1|62343_63183_-|amidohydrolase-family-protein
MRIDAHQHFWRIDRNDYGWITPEIPVLFRDYLPSDLEPHLQKHGISRTIVVQAAPTVEETEYILGLSGQADFIAGVVGWLDLENPSYKAQYRRFCGHPKFMGIRVMIQEMDDPGILLSTPYVEALSYFAEKDLPVDLLVLADQLPQLIQLLDRVPGLRGVIDHLAKPPIASGSLEPWRSHMAEIAQHPGIYCKLSGMVTEADPQGWKQEDFTAYVHGVLDLFGPERLMFGSDWPVCLMAATYDEVVEALRQVLQERLSPQEMEPIFGANAARFYKLKLS
>NZ_CP048429.1|WP_062527160.1|61365_62325_-|aldo/keto-reductase
MKYRKLGNTGLDVSVLSYGASSLGSVFRDVPKEEGIRTVHTAIDMGINLIDVSPYYGLTKAEMVLGEALRTVPRDRYILSTKAGRYGQDEFDFSKERVIRSAEESMTRLGTDYLDILLLHDIEFGRIGQVMEEGIPALKELKQSGKIRFYGVTGLPLNIFETVLSRTTLDVVLSYCHYSLNDTTLLRLLPLLERQGTGLMNASPISMGLLSSRKVPDWHPAGGDIQAACKRAAEYCRDKGEDIAKLAVQFSTANEQIPTTLVSTATPANIRNNILWTEEPMNEQLLEEVLDILKPVDGATWPSGRAEWNEERNQNGERI
>NZ_CP048429.1|WP_062527162.1|60343_61363_-|zinc-binding-alcohol-dehydrogenase-family-protein
MKGIICGEIGKFVYREDLPEPQPQAGEAIVRIRRIGICGTDLHAFRGNQPYFTYPRVLGHELSGTIEHIGDNPEGLRVGDQVSVIPYLHCGECRACLSGKTNCCQQMRVFGVHLDGGMRERVSLPVHNLLKTDGLTLDQAAMLEPLAIGAHAVRRSGLGAGDQVLVIGAGPIGLGVMAMARYAGAKVTAMDVNDERLDFCRKWAQAEHTVSALREPKEQLSKLTEGSFLPYVIDSTGSISSMESAFGLVGHGGTLTYVGLVKGMITFNDPDFHAREMTVQGSRNATREDFERVLQAIRDGYIDVSNYITHRSRFEDMIEQFENWLKPESKVIKALVELD
>NZ_CP048429.1|WP_062527794.1|58055_60302_-|glycoside-hydrolase-family-95-protein
MTSMEHKQQLWYSQPAREWNEALPIGNGRLGAMIFGGIAEEKLQLNEDSVWYGGPRDRNNEDALPHLPEIRRLILEGKLGEAEELAAMSMAGLPEAQRHYLPLGELLLSFGGHGQPAVDYRRELDLERGVSRISYVTGGVRYTRELFASCPDQVMVLRFSSDHKNGISLKARFNRHNWRYLEKTEKWQNSGLAMSGDCGGHGGSSFAAVLKAVAEDGLCRTVGEYLLVDGASSVTLLLAAGTTFRHPDPGLYAKRQLEELSRVPYEELLARHTADYRGLYGRVTLTLPENPHLNELPTDERLKRFQKGEEDNGLIATYFQYGRYLLISSSRPGSLPANLQGIWNDSFSPAWDSKFTININAQMNYWPAEICNLAECHEPLFDLIERMREPGRVTARVMYGCGGFTAHHNTDIWADTAPQDTYLPASFWPLGAAWLCLHLWEHYRFSQDRYFLEQAYETMKEAARFLLDYLVEDAEGRLITCPSVSPENTYKLPGGESGVLCAGASMDFQIIEALFGACIRSAEIIGRDEAFREELAAALARLPKAQIGKYGQIQEWMEDYEEAEPGHRHISHLFALYPGDAFTVEHTPELAKAARTTLERRLAGGGGHTGWSRAWIINFWARLMDGGKAYANVRALLDHSTLPNLFDNHPPFQIDGNFGGTAGIAEMLLQSHAGGLKLLPALPTSWSEGSVKGLRARGGYTLDFTWAEGLVMEAVVTCTVSGPCRLEGPGLDPVVFTGEAGSSYTFIR
>NZ_CP048429.1|WP_163704258.1|57302_57509_-|hypothetical-protein
MPLLKAPSAVLPGNKGRNAVVEAPPAVLPGNNGRNAVVEAPLAVLPGNNGRNAVVEAPLAHWLVFWKI
>NZ_CP048429.1|WP_062527164.1|54799_56467_-|extracellular-solute-binding-protein
MHKTAKRSARALAAGAFALTLALAGCSSNNTNSNTANGGTASPAANGDDNAPVTFSVFMSGPGQQPTADNKILKLMKDKTGVSFNMEFLVGDLQQKLGVMIAGGDYPDIMSGDDKLINAKAYIPLEDLIEKYAPNLKKHYAAVWNQIKDESDGHIYVLPSYGVYQGKITEPTYQGPGFWLQKAVLEEMGYPSPKTLDEYFDIIAKYKEKHPDMIGFESLNFDWRVFPLQNAPEHLSGHPNDGAVIVDNNKAQIFADKDISKTYYKKLNEINAQGLMDKEAFVQNYDQYLAKIASGKVIGMFDQHWNFQDGETSLISQGKIENTYIGFPLLYPGAEEWYRDRGAVGTNRGFGISINAKDPVRIIKFWDQMITEEWQKTIQWGIKGEDYEVKEDGTFYRTPEQRANADKTSWQVANKITTMHGYMPKIQGTYSDGNAADPGTQPQEFFDSLKPYDQKILKAYNKKSWSEFFKEPKENNIYFPAYSIVLKDGSPAQLAQSKLNDLQVKYLPKAIMASPDEFESVWTDYVNQIHKLDIKAYEDRINEGIQQRIKNWSVK
>NZ_CP048429.1|WP_143013406.1|53714_54701_-|sugar-ABC-transporter-permease
MSDTVLDKQVKTQKTRKRRVDPEIGVSLSWKTLKMQKQLIFMSVPIAIYLLIFNYAPIWGWLMAFQNYRPALSFGKQEWVGLQQFKFLFSDETFMMVLRNTVAMSFINLVLGTVTAIGLALLLNEIKVKFFKRIVQSISYLPHFLSWVIAAGIVATSLSVDDGIVNIILMKLHLIKEPIMWLSEGKYFWGIVGASNVWKEVGWGTIIYLAAITSIDPSLYEAASMDGAKRFQKMRYVTLPGIKATFVILLIMNIGHILDAGFELQYLLGNGLTVDWSQTIDIFVLKYGISMGNYSLATAAGIFKTIVSVILVFIANYIAKRLGEERLV
>NZ_CP048429.1|WP_074648158.1|68516_69944_-|family-43-glycosylhydrolase
MAKKQGFNPYLPSWEYIPDGEPYVFEGRVYVYGSHDRFNGHAFCLNDYVCWSAPEDNLADWRYEGVIYQTTDDPLNPDGSMCLYAPDVTVGPDGRYYLYYVLDKVPVVSVAVCDKPGGKYEFYGYVKYADGTRLGEREGDEPQFDPGVLTEGENTYLYTGFCAYGDQSRHGAMATVLGPDMLTIAEEPVFVAPSQPYSKGSGFEGYEFFEAPSIRKRGDTYYLIYSSISMHELCYATSKHPTRGFTYQGVIVSNCDLHINTYKPGDQPMYYGGNNHGSITQINGEWYIFYHRHTNGTAFCRQGCIERIEFRGDGTIPQVEITSCGPNGGPLEGRGEYPAYLACHLFCKDQEMYTGGFGPMGAWMDSRFPKITQDGRDGDEETGYIANMTDSATAGFKYFACGGVTRIKIKVRGYCQGAFEVKTSWDGPALGRIPVGFTNVWKEYTTEVAIPDGIQALYLTYTGHGGASLASFTLE
>NZ_CP048429.1|WP_163704262.1|69960_71802_-|family-43-glycosylhydrolase
MTRVQNHMKLAVYTRKSDQDYTDSLSNSVHLACTDDHNEFQALNRNYGILFASATVDENNVIHEKGLKNPYLFRTADGSFGIVAVRVDALGNDDEDSRGHILLWTSPDLVTFHNQGLVQLHQELYVKEAICHLNSTGEEYEIRWRDNEGNYYLNRLSDLMKPERISPPEPAEAFAVERPDETLPGINPGNVISVDSRTGRSVQASWTPLHNTEICVPESVSVTSAEDLKAVKATAVYSDGSTADKQVAWDAQGIDFTAPGTYTVPGKVVTHEFPFPLASGYADPVILLWHSKYYFLATNDNANDIGIYVREADTLNGLFAPGYQEAVILDLNEEHNFFQTFWAPEFHVIGEDLYILFAVGGREWGPQCHLMKLNKGGGIMNAADWDMPVRVKRADGAYLAEDGITLDMTYYKADGTSCVVWSYRKGIGTPLDTGSMLYIATVHEDNPAVLTSEPVLLSRPLFGWENAQGTINNEGPYPLITEDRVYIAYSGGAATGYTYALGLLSIPRGSDYLDNNAWSKVSTPVMSYYSIEGIYGAGHNSFFRDYDGNVLMLYHGEEQLVKHGTRCSAMHRVHFNRQGVPVLDVAKERDVHPDYADCSMQVIVHAETDKINK
>NZ_CP048429.1|WP_062527145.1|72023_73169_+|xylanase
MNSFTEGSFYTREYRNLFLENGMSEEAIRHRLDDTWNELFYGAPDVRIYHPMGDDKGYIVDTGNTDVRTEGMSYGMMMAVQMDKQEEFDRLWKFAKVYMQHTEGRYKDYFAWHCKLDGTRLSPGPAPDGEEFFAMALFFASKRWGDGAEPFNYSEQARIILRACVHKGEDGEGDPMWDPATRLIKFVPETPFSDPSYHLPHFYELFALQADEQDRAFWKEAAARSRAYLHKACHPVTGLSPEYANYDGTPAEPQPHGDYRHFFSDAYRVAANIGLDYEWFGCDPWQVEQSNRIQAFFRDIDVADYRRYTIDGQPFEEPSLHPVGLLATLAMASLAADGPDAGHFVKLFWNTPLRTGVRRYYDNCLYFFSLLALSGNYRIYL
>NZ_CP048429.1|WP_062527143.1|73345_74104_-|response-regulator
MRVLIVDDEPLILNGLVKIIGEAAPLGTEVFKANNAFEALDLMKDYMPDVTVTDLHMPEKNGFELIEAARDNGLCDRFIILTGYDEFDYVRKALRTGVVDYLLKPIDKNEIAVLLARINQELPSEADQECSGHAKRILAYTKTHYMNDLSLDHLAELMNLHPNYISSLFKKVTGETFVSYLNAFRIKEARKLLRSQRQLSVNVIGKKVGFEDKHYFTKVFKKYTGMTPGAYREEGEAEGNADGGGTSGGFSQ
>NZ_CP048429.1|WP_062527141.1|74100_75846_-|sensor-histidine-kinase
MSIVRKITLGYVILIFIPVVVFGYYYYSQIYGNLTNQFVQSRQKILEQAHANMKMDLTRIDSIQRMLQYNPYVTDYLDGVYESDLHSIYAYNRYISPVITQSLFINPEIESFRIYKTKQRVLPITDRFLDISSLDPQGQEVARTLKPGQGIWILPDPGAAAPSLMFYQNIYNSNFTEKIGLLELRVGSGLIRKLYEAAGGRDNWQAFLLPEQGVPPAEGAPAGIDKATWKLLGSNDTRPYFINNKTIVNQLYIEELGVRVVVTGKVDDVFRTIKRKEIILVFTIIALLAALSFVYYALASTITKRILLLARHMRNLDDDNMKQFISKHDKPNRQDEIGFLTSTYNTMIQRMDELINNVHRSELRNKEAAYKVLQAQIKPHFLYNTLETIRMLAESNNDKEVADISFWFGKLMRYSLSSEGDRTVLAREIETVIFYLNIHQMRLQHRLTYEIDVAMDAEQLDCPRFMLQPLVENSIVHGASAILRPVHIKLQVRETGDEIRISITDNGTGIQEDKLLAIRSRLARGGDNRAAAENGGGVGLFNVSERIKSFFGGSSRLVIDSEQDRGTCLNIIISKGGTGPA
>NZ_CP048429.1|WP_062527139.1|75946_77560_-|extracellular-solute-binding-protein
MKTIRSYKMLAAVLAAIMMISLLSACGNGGGNGNQGSKSDNAAQGDNAGNKDNTGAAGDSGNGQVKELSLFIDAPWYPVKEWKGPVADKITEKTGVKLKVTVATDDKQLPLMIASGDLPDLVFTYSNVGRLSDSKLSYPWNELIGKYAPDFKIDKTRIAIHTMDDGNFYTVRNSFATQEEMKQNKYSIGSDGNPGIAVREDIMKELGNPPINSLDDFVKVLGMVKKKYPDMVPLIMDKDWLEQYFLQQFGTEVLLDGWYEEDGKVDYSIRQPKMLEFFKFMNSLYRNGYILAENFALANDQIDDQYATNGKAFAHSHTVATADTDNIKIKSSGSGTFTFKMLPSALSKDAKVVSTGLGFAGTFITKKNKDPETSIKFLQYLASDEGKKLTMFGVEGEHWTWNNEGHPDLKYNPSDADFVNGNGIKWWYLYNDGVTEGMLSYVPGLQKTQALMETKAITVYKPQIGLIQTQPDSEEKTIKTKIDEMVKNEKVKIYLAESEEEAVANYNSMVKNAENMGLQKLVDWANATYEKKKDLFK
>NZ_CP048429.1|WP_062527137.1|77624_78506_-|carbohydrate-ABC-transporter-permease
MLKSQRQKDLLLDSVVYTILFIIMLTMLYPFYYVLIASFNKGSDSLLGGVYLWPRSFTLENYKMFLDDPKWYRAFMVTIVRTISGTALGLLLTSLVAYGLSHRDLLFSKVYFTIIIFAMYFSGGLIPYYVVLRSIGLLNSFGVYIIPSMLSTFFLLIAISFFREIPGELKESAHIDGAGEFVIFFRIILPVSMPLLATMALFMGVGQWNSWLDSAYFVQSENLRTLAFRMMEVINKSNSPMDAIAAANSSSAGVTSFSLQVTAMVVSIVPIICVYPFLQKYFVHGIMLGSVKG
>NZ_CP048429.1|WP_062527135.1|78523_79498_-|sugar-ABC-transporter-permease
MQLETQPISPQADSGRLWKRFKKQKMLHLFVGLGMVFLVIFSYTPMFGILMAFKDYSISSGIKGIFTSDWVGLKYFDEFVHDYQFGKIVRNTLVLSFLKVIFAFPAPILLAIMLNEVKNMAFKRFVQTVSYLPHFISWVVVVGVSYAFLSADVGVVNKALMSLGFIREPLNILTGPNYFWGLAVGSAIWKEMGWWTIIFLAAITGINPALYEAAEIDGAGRLARIRHITLPGMKGTIVVVLVLTIGSILGGGLVGSNFEQAYLFGNSINNPTSEIVQTYAFKVGLRDGRFSYAAAIDLIQSVISVVLIFSSNFIAKRMSGSSLF
>NZ_CP048429.1|WP_062527134.1|79681_80488_-|hypothetical-protein
MKVQEVIDRILLDCCGGRKLEQTCDVLASGHKDMEVTGIVTTFMATVDVIREAAAIGANLIITHEPTYFTGMDTLDWLQKDPVYLAKRTLIEQHGIAIWRFHDHMHLADTDRIYDGLLKELAWEDKKLDAKDSWGYLIEETTVRALARFLKQRLGMDVIQIVGNPDSACSRIGILVGGGSLGLGREQMPMELMQEKNLDVMICGDITEWTLCAYVNDASMLGQNKAMIVIGHERSEEWGMKYMAEWLALLVSGLPVTFVDAKEPFIYL
>NZ_CP048429.1|WP_039833155.1|80515_81409_-|carbohydrate-ABC-transporter-permease
MIQTRGERTFVIFSAIVMILLTVFAFLPFLLIVIASFTDETALIRNGYSFFPEQTSLDAYLYIKASAYTFVRAYGVSFLVTLLGTGFGLLITSMLAYPMSRTDFKYHNTLAFIVFFTMLFSGGIVPSYIMWTQYFHIKDTLWALIVPNLLSNGFNVLLVRNYFKNNVPVEIIEASQIDGASELRTFFRIMLPLSMPVMATVGLFMGLAYWNDWINALYFVSKPKWYGIQNLLIQLMNNIQFLNSGQASGVIGAEAVKLPSTAVRMAMAVLGIVPVLFVLPFMQKYLTRGVVIGAVKG

Crispr_ID: NZ_CP048429_2

• CRISPR_ID: NZ_CP048429_2
• CRISPR_location: 217513-217603
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_2

Consensus_repeat	Method
AAGTTTTATGAAGCTATGCTACATG	CRISPRCasFinder

spacers of NZ_CP048429_2

>2.1|217538|41|NZ_CP048429|CRISPRCasFinder
TTCTTGCTACGCAATAAAACTCGCTTCGGAAGCATAGGCTT

CRISPR arrays and Neighbor proteins around NZ_CP048429_2

CRISPR arrays

The CRISPR arrays of NZ_CP048429_2

>merge|NZ_CP048429|2|217513-217603|CRISPRCasFinder
AAGTTTTATGAAGCTATGCTACATGTTCTTGCTACGCAATAAAACTCGCTTCGGAAGCATAGGCTTAAGTTTTATGAAGCTATGCTGCATG

>NZ_CP048429|2|2|217513-217603|CRISPRCasFinder
AAGTTTTATGAAGCTATGCTACATG	TTCTTGCTACGCAATAAAACTCGCTTCGGAAGCATAGGCTT
AAGTTTTATGAAGCTATGCTGCATG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_020426372.1|223020_223314_-|sporulation-protein-YqfC	unknown	unknown	gnl|CDD|131903
NZ_CP048429.1|WP_062526941.1|217078_217498_-|cytidine-deaminase	unknown	unknown	gnl|CDD|183511
NZ_CP048429.1|WP_062526929.1|223599_224196_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062526947.1|211000_213079_-|glycine--tRNA-ligase-subunit-beta	unknown	unknown	gnl|CDD|234925
NZ_CP048429.1|WP_062526931.1|221842_223024_-|sporulation-protein-YqfD	unknown	unknown	gnl|CDD|377731
NZ_CP048429.1|WP_062526936.1|218088_218586_-|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl|CDD|376735
NZ_CP048429.1|WP_062526938.1|217693_218089_-|diacylglycerol-kinase-family-protein	unknown	unknown	gnl|CDD|260134
NZ_CP048429.1|WP_062526949.1|208466_210287_-|DNA-primase	unknown	unknown	gnl|CDD|235551
NZ_CP048429.1|WP_020426386.1|207292_208426_-|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl|CDD|236413
NZ_CP048429.1|WP_062527774.1|225237_226620_-|nodulation-protein-NfeD	unknown	unknown	gnl|CDD|223961
NZ_CP048429.1|WP_020426374.1|220855_221827_-|PhoH-family-protein	unknown	unknown	gnl|CDD|224616
NZ_CP048429.1|WP_020426382.1|213071_213959_-|glycine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|236473
NZ_CP048429.1|WP_062526934.1|218582_220838_-|HDIG-domain-containing-protein	unknown	unknown	gnl|CDD|224397
NZ_CP048429.1|WP_074648172.1|215187_215331_-|YqzL-family-protein	unknown	unknown	gnl|CDD|379412
NZ_CP048429.1|WP_020426379.1|215439_216333_-|GTPase-Era	unknown	unknown	gnl|CDD|234624
NZ_CP048429.1|WP_157243850.1|227100_227394_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_167330827.1|224212_225211_-|flotillin-like-protein-FloA	unknown	unknown	gnl|CDD|237462
NZ_CP048429.1|WP_062526951.1|206381_207206_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062527775.1|210325_210799_-|hypothetical-protein	unknown	unknown	gnl|CDD|178882
NZ_CP048429.1|WP_062526943.1|214395_215151_-|DNA-repair-protein-RecO	unknown	unknown	gnl|CDD|273175

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_020426372.1|223020_223314_-|sporulation-protein-YqfC	gnl|CDD|131903	TIGR02856, Uncharacterized_protein_YqfC, sporulation protein YqfC. This small protein, designated YqfC in Bacillus subtilis, is both restricted to and universal in sporulating species of the Firmcutes, such as Bacillus subtilis and Clostridium perfringens. It is part of the sigma(E)-controlled regulon, and its mutation leads to a sporulation defect. [Cellular processes, Sporulation and germination].	8.20981e-23
NZ_CP048429.1|WP_062526941.1|217078_217498_-|cytidine-deaminase	gnl|CDD|183511	PRK12411, PRK12411, cytidine deaminase; Provisional.	1.09413e-62
NZ_CP048429.1|WP_062526947.1|211000_213079_-|glycine--tRNA-ligase-subunit-beta	gnl|CDD|234925	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated.	0
NZ_CP048429.1|WP_062526931.1|221842_223024_-|sporulation-protein-YqfD	gnl|CDD|377731	pfam06898, YqfD, Putative stage IV sporulation protein YqfD. This family consists of several putative bacterial stage IV sporulation (SpoIV) proteins. YqfD of Bacillus subtilis is known to be essential for efficient sporulation although its exact function is unknown.	3.6598e-132
NZ_CP048429.1|WP_062526936.1|218088_218586_-|rRNA-maturation-RNase-YbeY	gnl|CDD|376735	pfam02130, UPF0054, Uncharacterized protein family UPF0054.	1.168e-51
NZ_CP048429.1|WP_062526938.1|217693_218089_-|diacylglycerol-kinase-family-protein	gnl|CDD|260134	cd14265, UDPK_IM_like, Integral membrane undecaprenol kinase and similar enzymes. This mostly bacterial family of homo-trimeric integral membrane enzymes, the products of the dgkA gene, catalyzes the ATP-dependent phosphorylation of undecaprenol to undecaprenyl phosphate. C55-isoprenyl (undecaprenyl) pyroposphate acts as a scaffold for the assembly of peptidoglycan components; undecaprenol kinase (UDPK) is involved in recycling undecaprenyl units for re-use in the peptidoglycan biosynthesis. UDPK does not participate in the de-novo biosynthesis of undecaprenyl phosphate. Gram-positive bacteria have a large pool of free undecaprenol, in contrast to gram-negative bacteria. UDPK may also play a role in a stress-induced pathway that affects the function of ribosomes. In Streptococcus mutans, UDPK has been shown to be required for biofilm formation, such as in the case of smooth surface dental caries. Members of the UDPK family have low activity as diacylglycerol kinases (DAGK), and many of them are annotated as DAGKs.	5.08859e-44
NZ_CP048429.1|WP_062526949.1|208466_210287_-|DNA-primase	gnl|CDD|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP048429.1|WP_020426386.1|207292_208426_-|RNA-polymerase-sigma-factor-RpoD	gnl|CDD|236413	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP048429.1|WP_062527774.1|225237_226620_-|nodulation-protein-NfeD	gnl|CDD|223961	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones].	4.56908e-78
NZ_CP048429.1|WP_020426374.1|220855_221827_-|PhoH-family-protein	gnl|CDD|224616	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms].	1.25593e-141
NZ_CP048429.1|WP_020426382.1|213071_213959_-|glycine--tRNA-ligase-subunit-alpha	gnl|CDD|236473	PRK09348, glyQ, glycyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP048429.1|WP_062526934.1|218582_220838_-|HDIG-domain-containing-protein	gnl|CDD|224397	COG1480, COG1480, Predicted membrane-associated HD superfamily hydrolase [General function prediction only].	0
NZ_CP048429.1|WP_074648172.1|215187_215331_-|YqzL-family-protein	gnl|CDD|379412	pfam14006, YqzL, YqzL-like protein. The YqzL-like protein family includes the B. subtilis YqzL protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 50 amino acids in length.	4.11487e-07
NZ_CP048429.1|WP_020426379.1|215439_216333_-|GTPase-Era	gnl|CDD|234624	PRK00089, era, GTPase Era; Reviewed.	0
NZ_CP048429.1|WP_167330827.1|224212_225211_-|flotillin-like-protein-FloA	gnl|CDD|237462	PRK13665, PRK13665, hypothetical protein; Provisional.	0
NZ_CP048429.1|WP_062527775.1|210325_210799_-|hypothetical-protein	gnl|CDD|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	1.60945e-46
NZ_CP048429.1|WP_062526943.1|214395_215151_-|DNA-repair-protein-RecO	gnl|CDD|273175	TIGR00613, DNA_repair_protein_RecO, DNA repair protein RecO. All proteins in this family for which functions are known are DNA binding proteins that are involved in the initiation of recombination or recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	5.05418e-73

Protein sequences

>NZ_CP048429.1|WP_062526941.1|217078_217498_-|cytidine-deaminase
MESALLLQEAIKARAKAYIPYSRFGVGAALLDQDGHVHHGCNIENAAFGPTNCAERTALFRAIADGHKAGTFQAIAVIADTDGPVSPCGVCRQVMVELCAPDMKVILGNLRGDIQETTVRDLLPGAFGPTDLEQGQAPE
>NZ_CP048429.1|WP_020426379.1|215439_216333_-|GTPase-Era
MKFKSGFVAIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTANNSQIVFLDTPGIHKRQSKLGDYMNQTAMSTLHEVEAVLFLVDASEGMGGGDRYIAEQLKDVKTPVILVMNKIDKIEPEALLPLITEYNKLHEFAEIVPISAKLGSNVNTLLDQVVKYLPEGPQYYPEDQITDHPEQFVCAELIREKILHLTREEVPHSIAVAIEDMRVESNGVVHVSAVIFVERDSQKGIIIGKQGAMLKEVGRRARTDIENLLGSKIFLELWVKVKKDWRNQERVLRDLGFHKDL
>NZ_CP048429.1|WP_074648172.1|215187_215331_-|YqzL-family-protein
MRDFSWKYFAITGDVDAYLLYKQAADPFEGSLELPAEEEKVLDEEAQ
>NZ_CP048429.1|WP_062526943.1|214395_215151_-|DNA-repair-protein-RecO
MLYRVEGIVIRSMDYGEGNAIITLCTENAGKVGVLVRGAKKVKSRHAALIQLFTTGEYVFFRNNGGLGTLNAGEITKSHHPLREDLVKAAYASYACELLDRVLHDEETGSFWFRQLTACLNALEEDKEPGIIINVFEMKVLQAAGYGPQLDNCIVCGLDKPDEELRISPRLGGVLCRSCRHNDPPAMEVSPRALKLLRLFAALDLTRLGNVDVKEGTRAELKKIMRAFMDHQLGLKLKSQNFLDQLDKYNI
>NZ_CP048429.1|WP_020426382.1|213071_213959_-|glycine--tRNA-ligase-subunit-alpha
MNFQQMILTLQQFWSAQNCILVQPYDTEKGAGTMNPMTFLRSLGPEPWKVAYVEPSRRPSDGRYGENPNRLYQHHQFQVIIKPSPDNIQELYLDSLKALGVDPLLHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGIETSPVAVEITYGMERLASYIQEKENVFDLEWVGGMTYGDVFHQPEVEHSTYTFEVSDVKMLFTLFNTYEEEARRAMEQHLVFPAYDYVLKCSHTFNLLDARGAISVTERTGFITRVRNLARTVAATYLEEREKLGFPLLKKEGADLV
>NZ_CP048429.1|WP_062526947.1|211000_213079_-|glycine--tRNA-ligase-subunit-beta
MSKDILFEIGLEEVPARFIRAAMEQLKDRTVKWLEASRISHSGVSAYATPRRLTVLVKDAAEKQEDISEEVKGPSRKIALDASGEWSKAALGFARSQGVSPEQFTFKELAGVEYIYATKNSDGVNTSSLLSEGLSGIVSAMTFPKNMRWGAYDFKFVRPIRWLVALFGQEVIDLEITGVKAGNVSRGHRFLGTEAVISEPAEYVETMRSQHVLVDVKEREELILSQINKLAEEKGWTIAIKEDLLEEVLFLVETPTVLFGTFDAAFLNIPQDVLITSMREHQRYFPVFDAAGALLPFFVTVRNGNAESLDVIAKGNEKVLRARLSDAKFFYEEDQKLEISDALAKLENIVYHEELGSVGDKVRRIRAVADRLAVKLGLSEKAAAEASRTADICKFDLVTQMVNEFSELQGTMGEDYARKAGESEAVARGIFEHYQPRFAGDAVPASEVGLVVSLADKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQMVLEHKLTVSLQEIFDAALEVHENLRTEKPFAPDLRINLYEFFGLRVKRLLSDNVRYDVVDAVIAAGFDDIVAVVGRSRALMDTVNNQADFKITVDSLTRVSNLAAKAAEGTAVVPSLLKEEAERKLYETWQAIHAPYQEALRARNAEEALRILSGLKDAVTGFFDSVMVMADDEQIRANRLALLAGIDADSKAFADFGKLVW
>NZ_CP048429.1|WP_062527775.1|210325_210799_-|hypothetical-protein
MERPQERKIVVDGDACPVKQEIIAAARSFGIPVIMVSSYDHVLRGEEGVTVVQVDRGADSADLYIANHITAGDIVVTQDYGLAALALGKRCRVLSNRGQEYDDLGMDFMLESRHARAVERRRGHYSKGPKAITAEEKIYFQHKLTKLLMILQENVQL
>NZ_CP048429.1|WP_062526949.1|208466_210287_-|DNA-primase
MASGQGNIPEEVIESVLARHDIVDTVGKVVHLSKQGKYLWGLCPFHSEKTPSFTVTPERGVFHCFGCGMGGNAIKFRMEIEGLSFPEAVRIMAEESDIPVPEGTGGVLSPPDPERDRLIQAYELSAKFYHFLLKNTEYGTAAMDYLRSRGFSGKMIDQFQIGYAPDRWDTLLQFLDKRNFNLAEMEKGGLLSARGEGKGYIDRFRGRVIFPIANRTGKVIAFAGRILGDGQPKYLNSPESRLFNKSRILYNLHQSKASIRKTRQIVLFEGYGDVISAWEAGVHNGVATMGTSLTEGHVALMKSLGDEIVLAYDGDKAGQAAAMKAIPMLEDNGLRVKVAVLPSGLDPDEFISRHGGERFKEQVIDSAVSSIKFKLIYLKKNHILLEEDGKIAYVKEALEIIASLHSSTEREVYLREIASELELSYDSLKQDCNLLRASMQKNLPEGDNNDKRWNNGRHKKGQVQTPTLLPAYHVAERRLLSWMIQDPDAAAYVGERLGEEFNIDDHAAIAAYLYAYYAQGKPPGISRFLSSLQDDRLEKTATAISMMDTPPDWNTQVLDDCIREVRKYPVQRGMEQKREEMIQAEKSGDFLRAAQIASEIIALERQ
>NZ_CP048429.1|WP_020426386.1|207292_208426_-|RNA-polymerase-sigma-factor-RpoD
MANDQHTELEAEFTLDQVKDQLIEQGKKRSSLNYKDIMEKLSPFDQDPEQMEEFYEQLSDLGIEVVNENDEEVNTLRPSEDNEGSDNDDFSFDDDLSLPPGIKINDPVRMYLKEIGRVPLLSADDEVELAMRIKNGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDHNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPSPEEIAAEMELTVEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIEDQEALAPADAAAYELLKEQLEDVLDTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFLE
>NZ_CP048429.1|WP_062526951.1|206381_207206_-|hypothetical-protein
MNLEKREIILREIQYWRRSKVLPEQYCDFLSNLYDDEAGVKDSNPISLRNLQQGSIKIWLFGFGIISLIFLISLYFSVFPWPLQLATALCVLIVCYGYSYIYRDRNNMISLVLAGAGSVLTLGFGLWLIALHDLDPDFWRPLLIAGCGLLWVVLGFFLRISLLHFCGFAFWALLYAGFFGQQRPDASILELELLYLPLCVLMVWLSWLLHHRVNGVSGVYLGVGVSLWIMPEIDALLLRQDFPQWVSLILILKIAAGLALLFIFRKKWITWVTS
>NZ_CP048429.1|WP_062526938.1|217693_218089_-|diacylglycerol-kinase-family-protein
MVKNTAVGHKKFWHSFRYAAHGIASAFKSELNMKVHSTLAVLVLAAAVILRLPPSSWMLLLLAITLVLAAELLNTAIEATIDLVSPEIHPLAKKAKDTAAGAVLLTAVFAVIVGIYVFYHPVMDWITGLMS
>NZ_CP048429.1|WP_062526936.1|218088_218586_-|rRNA-maturation-RNase-YbeY
MSLAIVWNNEQEEHPISDELITLLESILQKAGEAEGIDEGEVDLTFVNNERIHELNLEYRGIDRPTDVLSFAMNETGEDEPEIIYALDEGEEGEDVPYVLGDIIISVTRAQEQALEYGHSLERELGFLFVHGFLHLLGYDHQDAVSEAEMMFKQEKVLAQVGLTR
>NZ_CP048429.1|WP_062526934.1|218582_220838_-|HDIG-domain-containing-protein
MASKQPSKLSGFVYNSNGWKYSAVTRYALFLLLGLVFYFSLSSDLVPKKYDIKEGTHSAKEITAPKQILDTKAKLKAQEEAAENVTNRYAIIPMRADNLVTSLLDRIDRLNQDDLISQSDKTAIYREEIPQRASDFILNFVASSRNAGTYSGTLLDEMQSVIKDQTYVIPEETYIKIPRLTSQDIIEMKPVARDIVTKLMNDQITDAQSARAKVAEQVSVSSLSQRTAREVVQELVRLVITSNKFYDEEATKEAKVQARENTPDVFIEQGDVLVAKGELITPELYKLLDDNGLLSNEVNYWPQFGLLILSALLSFGLFTFIRYSGGASGFKYNNSQLLMLVLVFVITIIAVKLAAFLQTDVRAYVGFLAPVAIGAMLITMLLDMTLAYFCSILFSILASIMLNVQQNTVFDFTFGFFALIVCYVAIFATHRAGQRSTLLKGGIMVSLIGCVTVFMLNVLGGGVWNQTQALYAIGFSFASGLLTAVLVIGLMPFFEATFGILSALKLVELSNPNHPLLRKLLTETPGTYHHSVMVGNLSEAAAEAIGADGLLCRVGSYYHDIGKTKRPFYFIENQNNMENPHDSIEPMLSKSIIVAHARDGVEMLKEYKLPKPIRDIAEQHHGTTFLHYFYHKALKLAEEKGVEPDFTEEDFRYPGPKAQSKESAVVGIADSVEAAVRSLRKPTVVQVETMIEKIIKSRLDDHQFDECDLTIKELDIIARTLKETVMGIFHSRIEYPEDVKKPKKEEGAVTT
>NZ_CP048429.1|WP_020426374.1|220855_221827_-|PhoH-family-protein
MSEQTASIRISLQNAGEAQSLFGPQDGFLKIIESEIPAVIDSREAEITIRGAEREVDMLGQLFGVLLSLIRSGYILSERDIQYAVELAKDFRADQLLDLFKGEITTTFRGKPIRVKTIGQKHYVTTIKKRDIVFGIGPAGTGKTYLAVVLAVTALKEGSVKRIVLTRPAVEAGESLGFLPGDLQEKVDPYLRPLYDALYDVMGPDQVAKALERGLIEIAPLAYMRGRTLDDSFIILDEAQNTTPEQMKMFLTRLGFGSKMVITGDVTQIDLPRGKKSGLIEAKTILSGIDELGFVYFAEQDVVRHSLVQKIIVAYERSAENLE
>NZ_CP048429.1|WP_062526931.1|221842_223024_-|sporulation-protein-YqfD
MKQPPLASLRGFVTLHVTGPQVEKFINAVTEADIVIWDVRPAGNGASLNLLLDDFFALRPLLKKTGCRTRVTARNGLPFNAAKLWKRKFFAAGLLLFGIGLVLLSSMIWTVKIEGNNRIASEDILQAARHEGVYPFQWIWRMDDPDKLSKKLTSTLPGVSWIGVHRTGTSVKIQIVESDQPENKPLLSQRHLISRTDAVVTEIYAEQGRPVVSRNTRVKKGQILISGAIGDEENMEYVVAKGEVKGLVWHEYNIEVPLNRTRSSYTGERKDRTYLVLGKWAVQLWGYGKSDFAESRTLTEHDPLTWRSFQLPVGLLTEKEMEVLETAETLSPEAAREEGVMRAKNDILARYGTDSAIKSQKILHEKKENGKVYMKVLFEVEERITQELPIVNN
>NZ_CP048429.1|WP_020426372.1|223020_223314_-|sporulation-protein-YqfC
MTRIGRRLRGWTNGVLDLPQDVLQELPRITLIGNKELYIENHRGVLHFSSEQLRLALVNGSLEISGEGLVIRNILGQELAVEGIIGEIRYKGSEENS
>NZ_CP048429.1|WP_062526929.1|223599_224196_-|hypothetical-protein
MGSLIYVAAIIIIAIISGLNKAGKNKGSSAPRGGMPTFGGGDGYPLNPGRRVKSKPEYGGDTKERSGFPVPGGSTAYPGQPAASRAEAEYDASPAWPESSERPSPDYETGEGLSLEQAGEEDGVQARAERMQRELERLHLQFDGAAAGADPGKKGARPDSSPSGSREFAADRKALREGLVWAEILGPPRSRQPRSYRR
>NZ_CP048429.1|WP_167330827.1|224212_225211_-|flotillin-like-protein-FloA
MEASTITILLIAVVVIIVLSVFFSFFPVMLWVSAWAAGVRISIITLVAMRLRRVTPSRIVNPLIKATKAGLGVNINQLESHYLAGGNVDRVVNALIAAQRADIPLEFTRAAAIDLAGRDVLLAVQMSVNPRVIETPIVAAVAKNGIEVKVKARVTVRANIDRLVGGAGEETIIARVGEGIVTTVGSSSTHKDVLENPDSISRTVLSKGLDSGTAFEILSIDIADVDVGKNIGAYLQTEQAEADKRIAQAKAEERRAMAVAHEQEMKARVVEMKALVVESESQVPLAMAEALRSGKLGVMDYMNLKNIEADTQMRGSLGKLNDGDDSSRPTNK
>NZ_CP048429.1|WP_062527774.1|225237_226620_-|nodulation-protein-NfeD
MAAAGISVLLLVLFLLPMAGVVSADNTATRAPATSPAEPKSGPVFIIPVDQEIERGLQSFLTRGFQEAANYGAVLILLEIDTPGGLVSSAEQIGTMVRDSTIPTAAYINGDAASAGSYIALNAGSIIMKPGSMIGAASLVDGKGGSVDDAKLVSYWKSKMVGAAELNGRDPEIAAGMMDKNIVVNKPELGVSKAQGQIIALSSDEALKAGYADSIASTPEEAITSLGYSTDDIFRVEHTGAEKMSHFLTNPIVMTILLFIGIAGIVIEMLVPGFGVPGIIGTLAFALYFFGNYVAGFAGSETWLLFILGLVMLVLELFVPSFGILGLLGSVFLVAGVVRAAYSYTHALFSLGIAFAAAAVVITIVAVTFKERGIWNRFILQDSLTKEQGFVPVLEKLSLVGASGVSITPLRPAGTASLNGERVDVVTEGSFIAAGASISVIKVEGGRVVVKEAASKENGI
>NZ_CP048429.1|WP_157243850.1|227100_227394_-|hypothetical-protein
MKKGTQRVGMRGINTSDLAANSLRGQKRGINTSDLAENGLPGQRRGINTSDLAANSLRGQRRGINTSDLAANGLRGQRRGINTSVSRKTACGVKREV

Crispr_ID: NZ_CP048429_3

• CRISPR_ID: NZ_CP048429_3
• CRISPR_location: 513115-513202
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_3

Consensus_repeat	Method
GCGGCTACGAGGCTACACCGAGTGCAT	CRISPRCasFinder

spacers of NZ_CP048429_3

>3.1|513142|34|NZ_CP048429|CRISPRCasFinder
ACCCCCCCCATGCGCAAAAGACACGCCAAGCTGA

CRISPR arrays and Neighbor proteins around NZ_CP048429_3

CRISPR arrays

The CRISPR arrays of NZ_CP048429_3

>merge|NZ_CP048429|3|513115-513202|CRISPRCasFinder
GCGGCTACGAGGCTACACCGAGTGCATACCCCCCCCATGCGCAAAAGACACGCCAAGCTGAGCGGCTACGAGGCTACGCCGAGTGCAT

>NZ_CP048429|3|3|513115-513202|CRISPRCasFinder
GCGGCTACGAGGCTACACCGAGTGCAT	ACCCCCCCCATGCGCAAAAGACACGCCAAGCTGA
GCGGCTACGAGGCTACGCCGAGTGCAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062523431.1|506395_507535_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl|CDD|377382
NZ_CP048429.1|WP_062523332.1|504382_506092_-|ATP-dependent-protease-LonB	unknown	unknown	gnl|CDD|131948
NZ_CP048429.1|WP_062523334.1|513468_514344_-|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl|CDD|223654
NZ_CP048429.1|WP_062523333.1|509797_511123_-|trigger-factor	unknown	unknown	gnl|CDD|234956
NZ_CP048429.1|WP_062523329.1|500248_500836_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_039838062.1|508916_509507_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl|CDD|178955
NZ_CP048429.1|WP_062523337.1|516297_517725_-|hypothetical-protein	unknown	unknown	gnl|CDD|223893
NZ_CP048429.1|WP_062523336.1|515382_516246_-|phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270371
NZ_CP048429.1|WP_062523335.1|514340_515291_-|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl|CDD|273992
NZ_CP048429.1|WP_062523342.1|521282_525308_+|hypothetical-protein	unknown	unknown	gnl|CDD|378939
NZ_CP048429.1|WP_062523341.1|520393_521092_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_CP048429.1|WP_062523432.1|511222_512068_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062523338.1|517913_518357_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_020430248.1|507647_508904_-|ATP-dependent-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl|CDD|235422
NZ_CP048429.1|WP_082722654.1|518572_519304_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP048429.1|WP_062523340.1|519300_520335_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|378925
NZ_CP048429.1|WP_074648409.1|525469_528823_+|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl|CDD|223627
NZ_CP048429.1|WP_062523331.1|501722_504086_-|endopeptidase-La	unknown	unknown	gnl|CDD|223542
NZ_CP048429.1|WP_062523330.1|501044_501710_-|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl|CDD|234770
NZ_CP048429.1|WP_157243798.1|512395_512548_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062523431.1|506395_507535_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl|CDD|377382	pfam04551, GcpE, GcpE protein. In a variety of organisms, including plants and several eubacteria, isoprenoids are synthesized by the mevalonate-independent 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway. Although different enzymes of this pathway have been described, the terminal biosynthetic steps of the MEP pathway have not been fully elucidated. GcpE gene of Escherichia coli is involved in this pathway.	0
NZ_CP048429.1|WP_062523332.1|504382_506092_-|ATP-dependent-protease-LonB	gnl|CDD|131948	TIGR02902, Lon_protease_2, ATP-dependent protease LonB. Members of this protein are LonB, a paralog of the ATP-dependent protease La (LonA, TIGR00763). LonB proteins are found strictly, and almost universally, in endospore-forming bacteria. This protease was shown, in Bacillus subtilis, to be expressed specifically in the forespore, during sporulation, under control of sigma(F). The lonB gene, despite location immediately upstream of lonA, was shown to be monocistronic. LonB appears able to act on sigma(H) for post-translation control, but lonB mutation did not produce an obvious sporulation defect under the conditions tested. Note that additional paralogs of LonA and LonB occur in the Clostridium lineage and this model selects only one per species as the protein that corresponds to LonB in B. subtilis. [Protein fate, Degradation of proteins, peptides, and glycopeptides, Cellular processes, Sporulation and germination].	0
NZ_CP048429.1|WP_062523334.1|513468_514344_-|phosphate-ABC-transporter-permease-PstA	gnl|CDD|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	8.95639e-92
NZ_CP048429.1|WP_062523333.1|509797_511123_-|trigger-factor	gnl|CDD|234956	PRK01490, tig, trigger factor; Provisional.	1.94082e-163
NZ_CP048429.1|WP_074648409.1|525469_528823_+|DEAD/DEAH-box-helicase-family-protein	gnl|CDD|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	1.09241e-106
NZ_CP048429.1|WP_039838062.1|508916_509507_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl|CDD|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	1.10262e-148
NZ_CP048429.1|WP_062523337.1|516297_517725_-|hypothetical-protein	gnl|CDD|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	4.93299e-07
NZ_CP048429.1|WP_062523336.1|515382_516246_-|phosphate-ABC-transporter-substrate-binding-protein	gnl|CDD|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	5.0838e-80
NZ_CP048429.1|WP_062523335.1|514340_515291_-|phosphate-ABC-transporter-permease-subunit-PstC	gnl|CDD|273992	TIGR02138, phosphate_transport_system_permease_protein_PstC, phosphate ABC transporter, permease protein PstC. The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions].	3.88951e-78
NZ_CP048429.1|WP_062523341.1|520393_521092_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.70759e-13
NZ_CP048429.1|WP_062523342.1|521282_525308_+|hypothetical-protein	gnl|CDD|378939	pfam12733, Cadherin-like, Cadherin-like beta sandwich domain. This domain is found in several bacterial, metazoan and chlorophyte algal proteins. A profile-profile comparison recovered the cadherin domain and a comparison of the predicted structure of this domain with the crystal structure of the cadherin showed a congruent seven stranded secondary structure. The domain is widespread in bacteria and seen in the firmicutes, actinobacteria, certain proteobacteria, bacteroides and chlamydiae with an expansion in Clostridium. In contrast, it is limited in its distribution in eukaryotes suggesting that it was derived through lateral transfer from bacteria. In prokaryotes, this domain is widely fused to other domains such as FNIII (Fibronectin Type III), TIG, SLH (S-layer homology), discoidin, cell-wall-binding repeat domain and alpha-amylase-like glycohydrolases. These associations are suggestive of a carbohydrate-binding function for this cadherin-like domain. In animal proteins it is associated with an ATP-grasp domain.	2.65929e-18
NZ_CP048429.1|WP_082722654.1|518572_519304_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.23209e-88
NZ_CP048429.1|WP_062523340.1|519300_520335_+|ABC-transporter-permease	gnl|CDD|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	6.17141e-21
NZ_CP048429.1|WP_062523331.1|501722_504086_-|endopeptidase-La	gnl|CDD|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP048429.1|WP_062523330.1|501044_501710_-|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl|CDD|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	9.89222e-112
NZ_CP048429.1|WP_020430248.1|507647_508904_-|ATP-dependent-protease-ATP-binding-subunit-ClpX	gnl|CDD|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0

Protein sequences

>NZ_CP048429.1|WP_157243798.1|512395_512548_+|hypothetical-protein
MRLGDENPEPGSLKHSLREHPLRNQPAGLYPFRDVIKQPPFGEAVRASGG
>NZ_CP048429.1|WP_062523432.1|511222_512068_-|hypothetical-protein
MLESERYGEAMELLRFLLQCQGQDERHYQEWQSLLEWLEAAFPYASRDGEGDREPSGSEQDLKEEDMARILARSKLEEDADYPDKLLKKVMNEPLSEATILALEQLSYLEGGQVDEALAGWLEQAAVHPLLQFRTLQTLRRRGAQGTIGLMRGGEVAYVDIETVPLTNEEFPPQVGQVLERVAEQAEVHEPTLYYFAQELWGQFMMSVYGSAEYRKLLEGEDAQLDIWAGALHQMVSESLNGTRQEEETRAMYGITGSMRFQFEGAYRSLKGFVKSSLLDK
>NZ_CP048429.1|WP_062523333.1|509797_511123_-|trigger-factor
MKATWEKIEKNLGVLEVEVEAERVAAALDKAFNKVVKKANVPGFRKGKVPRPIFESRFGVESLYQDAIDILLPEAYGEAVEETDIFPVDRPEVDIEQFAKGQPFIFKAKVTVKPEVVLGQYKGLEVPVQKAEVTEDELNAELKRLQERHAELVVVEDEPAANGDIAVIDFDGSVDGVQFEGGQAERHSLELGSNSFIPGFEEQVVGMSTGDFKDVEVTFPEAYHAENLAGKAAVFKVKVHEIKRKQLPELDDEFAKDVSEFDTLEEYKADLKAQLESRKQEELKGSRETAVVDAAAANAEVEIPDAMIASEVANMVRDFDNRLRQQGMNMDMFLSFSGQTREDLELQMKGDAEKRVRNNLVLEVIAKAENIEVSEEEVNAELASMAESFKRTPEEIRSILAANGSLSSLNDEISLRKTIDFLVENSVEVEAPAATEEASAE
>NZ_CP048429.1|WP_039838062.1|508916_509507_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MSLVPMVVESTSRGERSYDIYSRLLKDRIIFLSSAIDDDVANLVIAQLLFLAADDPEKDIHLYLNSPGGSVTAGMGIYDTMQYIKPDVSTICVGMAASMGSLLLTAGAPGKRYALANSEVMIHQPLGGVQGQASDIWIHTDWILKTRQKLNQIYVDRTGQPLEKIERDTDRDNFMSAEEAKEYGLIDQVLSSPIKS
>NZ_CP048429.1|WP_020430248.1|507647_508904_-|ATP-dependent-protease-ATP-binding-subunit-ClpX
MFKFNDEKGQLKCSFCGKSQEQVRKLVAGPGVYICDECIELCTEIVEEELGHEEELDLKDIPKPKEIRDILDQYVIGQEQAKKSLSVAVYNHYKRVNSQSKIEDVELTKSNILLLGPTGSGKTLLAQTMAKIINVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAERGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFIVGGAFDGLEQMIKRRIGKKVIGFNAAVEGQKDLKTGEYLSMVLPEDLLKFGLIPEFVGRLPVISTLEPLDENTLVRILSEPKNALTKQYIKLLEMDNVALKFEPLALEAIAKEAIKRNTGARGLRAIIESIMLDVMYEVPSRDDIKDCVITEQVVQEKSLPELSLKKDKKKEESA
>NZ_CP048429.1|WP_062523431.1|506395_507535_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MFLRHQTRPVNVGGVIIGGNNEVAIQSMCTTKTADVEATVAEILRLEEAGCQLVRVTVNNEEAAAAIKEIKARIHIPLVADIHFNYKLALLAIENGIDKVRINPGNIGRRDKVEAVVKACKEKGIPIRIGVNAGSLESHLLEKYGYPTPEAMVESALYHIGILEELDFHDIIVSLKASDVPMAIEAYRKAAEVIPYPLHLGITESGTLFAGTVKSSAGIGALLSMGIGSTVRISLSADPVEEVKVARELLKTFGLISNAPTLISCPTCGRLDIDLFSIANEVEEYISKLKVPIKVSVLGCAVNGPGEAREADIGIAGARGEGLLFRYGQMIRKVPEADLVSELKKEIDAIVVHFEATGEIPGRKHAGLAPAVQTGNMEQ
>NZ_CP048429.1|WP_062523332.1|504382_506092_-|ATP-dependent-protease-LonB
MELSILLMIVQLFFALVIGVYFWNLLRGQKTNKTAVDRESRKELDKLRKMRMISLTKPLSEKTRPASIGDIVGQKDGLRALKAALCSANPQHVIIYGPPGVGKTAAARVVMEEAKKNALSPFKSDAKFTEIDATTARFDERGIADPLIGSVHDPIYQGAGAMGVAGVPQPKPGAVTKAHGGILFLDEIGELHPIQMNKLLKVLEDRKVLLESAYYNSEDSNTPAYIHDIFQNGLPADFRLVGATTRSPEEISPALRSRCMEIYFRPLLPEEIAVIGRDAVQKIGLKPSPEAIEVVQQYATNGREAVNMIQLAAGLALTEGRDTLSAAEVEWVASSSQLPMRTERKIPSSPQIGLVNGLAVYGPGMGTLLEIEVSAAPAKSGQGRLNVTGVVDEEETRGGSRTIRRKSMAKGSLENVLTVLRTMNLEPDRYDLHVNFPGGTPIDGPSAGVAMAVAIVSAIRQLPVDNTVAITGEIGIHGRVKPVGGVIAKVEAAFQAGATTVLIPKENWQSLFADLGPLRVIPMETVEEVFRHLFGAETADVRLPAVSGETFSAAPSLLKADASGDSAKG
>NZ_CP048429.1|WP_062523331.1|501722_504086_-|endopeptidase-La
MIQSKSKGRRFPLLPLRGLLVYPSMVLHLDVGREKSVRALEKAMVEDNLILLCSQSEVNIEEPGQEDIFRVGTVANVRQMLKLPNGTIRVLVEGVERAEIINYTDNEEYYEVMARVLPEEEDVDQQSDALMRTVLNQFEHYITLSKKVTPETLAAVSDIEEPGRLADVITSHLALKIKDKQEILETIDVSKRLEKLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGEADELRSLMEEKDLPERVKEKIEKEIDRLEKMPASSAEGGVIRNYVDMLLSLPWTESTEDDLDILKAEQVLDADHYGLEKPKERVLEYLAVQKLVKKLKGPILCLVGPPGVGKTSLARSIARSLNRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGSINPVFLLDEIDKMAADFRGDPSAALLEVLDPEQNNTFSDHFVELPFDLSNVMFVTTANTVHNIPRPLLDRMEMLFIPGYTELEKLQIASRYLLPKQRKNHGLEDTQLSIEDDTLLKIVREYTRESGVRNLEQQIAALCRKAAKIIVSGEKEQVSILPSEVKDYLGASKYRYGMAELEDQIGTVTGLAWTEVGGDTLLIEVTVVQGTGKLTLTGQLGDVMKESAQAAFSYTRSKAEELGLAPDFYEKNDIHIHIPEGAIPKDGPSAGITIATALISALTKRYVSKDVAMTGEITLRGRVLPIGGLKEKSLAAHRAGYKKILLPKDNERDLKDIPESVRSDVEFVPVSHMDQVLKHALVEHHNEISSEAPSSVH
>NZ_CP048429.1|WP_062523330.1|501044_501710_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MKVNNAEFIISAVGPDQYPVDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQHMNYYRVNESMYFVDFPGYGYAKVSKTQRASWGKMVEKYLAERDTLKLVLLIVDLRHPPTGNDKMMFDWLKHYDLPLCVVATKADKIPKTRWPKHIKIMKQELGVLPGDNFISFSSEIGLGRDELWELIERYNQASEEEPAMEPEIEDAGNEAQPEDPSEA
>NZ_CP048429.1|WP_062523329.1|500248_500836_-|hypothetical-protein
MAQRLATEYVKATLQMTEFQMKQFLLTADTCFISHRVKILGGGEQEIVLEEAGGEEVHLSFQQRGSIYVCALSCRIVNPHLNNAIRKLFVTYKGTGTVNRIYQGFTMVYVYENGSVRRVSEVTPLGSKLVYQHKHSLAEMLRLYKSDAVEQEIVSLRVTIDRLLDQRNRVCRNEEIQEIDRNLARITRKLFELEA
>NZ_CP048429.1|WP_062523334.1|513468_514344_-|phosphate-ABC-transporter-permease-PstA
MNFTRTRHTARSQRNNKMATIAFYTLGALVMLLIFWLLFTILSKGLPSLRPDFLIKQPEEIDPGGGIGPVLFNSFYILFISLLISIPIGIGAGIYMAEYAPDNRFTGALRICVESLSSVPSIVFGLLGLAIFAEYFNVGLTILGGGVSLALLNLPMLARVTEEAVRAVPGEIREAGYALGMTKFHVIRKVVLPVAMPAIVTGVCLVAGRAFGESAVIILTAGLSTSGEMWDFNLFSPGETLAVHLWYVQSEAIVEDARQIADKSAAVLVFVVLLINFMFRFPLWLGRRRGR
>NZ_CP048429.1|WP_062523335.1|514340_515291_-|phosphate-ABC-transporter-permease-subunit-PstC
MGAPVQNLASRAQKSSLAEGGISAKRHNRHLFSNTMFRYYFLFSILALCLVLGLVIVFIGKTALLLFDNISPLDFFFSFNWSPEEEAFGAAAFIVNTLSLTALTLLIAVPVSVGMAVLCAEIAPKWLKSFIRPVLDLLVGIPSIVYGYLGLTVLLPFLRRVSGEGLGDGLLAAALVLALMVLPTICRISDDAIVAVPRKYRDAAYALGSTRLQVIMRVVLPAASRGIISAVILGMTRAVGETMAVVMVIGNTPQLAKTLFTPSSVLTSNIVMQISNVEFDSTWNYALHMMAFLLLLISFVLILIIRILGRNRRDAA
>NZ_CP048429.1|WP_062523336.1|515382_516246_-|phosphate-ABC-transporter-substrate-binding-protein
MKVFKKLTVTALTAVIAVTASFAGIAAAADSLKGKITVNGSTALLPLTLQAAKEFQKLHPKVKIAASGKGSVTGPQAVKKGIADIGACDWDASIDVPGFKAFDGQVANKVAVIPFATIVNKNVGVDNLTTEQLQGIYSGKITNWKEVGGSDASIVVVTRAFGSGTRVNYQAKALAGGDIVKKEKNYKETGSSGDMKTAVATTPNAIGYIDLVYVSGSEIKAVKFNGVAATTDNVINGSYKIWAYGYYMTKGQPTGATKEFIDYVQSKKFQNGSLKKLKFIPIAAMKG
>NZ_CP048429.1|WP_062523337.1|516297_517725_-|hypothetical-protein
MRNSKWFSAALASAILVAGGAGSIAATSSSANAAAVNTAAAKESSTTWSVNGTPVALSTINSGGYKLYSLNQVAGELGAKLIISSSGFELNDSKGLHNVLIKTGAKGYQVDGAAQQFTVAPVIYNGKAYVELTKLVTALGGELQAEDQTILSFARPEGQFDTLHWNADGSIIANKSDSETAQLIKFNAYPGDYEIFSSNSSASDFAVSADQKWGAFTDETGQLKLINLASGAISSLGTDTSVKTDLVWSADGKTIYFIQGDKQEKIAQISVETGVVKAVLEDKVENKSELRLSPDAKSVVYIVNVTGVAKNDADSTEDSLTVDFSKAGEQLYKLDLVTKDAKPAALTTALDNKLYPEILANGSVVYLSADPDGNAANTLKSIGTDGTISNIALDVEATWVTSVASGLVVSGLAADGSTSVYSIDGSGGKTVLFHTTEDVSEVAVSKDGSKLAVVSDGKVLAIQNGKALQLSKSTD
>NZ_CP048429.1|WP_062523338.1|517913_518357_-|hypothetical-protein
MADKKIALSLLALVAAVGLSACGNPGDEAGGGHFRTLAEENVDKPQYLPGDLPIPAGAGITLTEGKAVDGKKASMLVYETKESMDELGSTYQKYVNDKALKRGTQIVDRNNMIINGKVPNAYSYSIIGTRSDSNPGSAEIIVTWIEN
>NZ_CP048429.1|WP_082722654.1|518572_519304_+|ABC-transporter-ATP-binding-protein
MNQGHPVIAVTHVRRAFGTKEVLKDISLQVEQAETFGILGPSGSGKTTLVKLLTGIDEVTSGQVEVLGAQMPKLSMLQQIGYMAQSDALYTELSAKENLEFFASLYGLRGGNRTRRIADVMEVVNLQEHLRKRVDQYSGGMKRRLSLAIALLHEPPLLILDEPTVGIDPVLRKSIWKELRTLNGNGTTIVLTTHVMDEAEKCDRLAMIRDGQLLAVDTPADLLRNTGAASMEEAFLYYGGARR
>NZ_CP048429.1|WP_062523340.1|519300_520335_+|ABC-transporter-permease
MRVRAITLRILQQFIHDKRTMALMFIAPLLVLSLMSLVFNGDAYEPKIGVSGGAVPFTRALEAQNATVIAYKSADLGTAALQESELDALITLNGTTPEVMLEGSNPTANRAVMLALTAATRNLQSAGGEGQVQPQISYLYGAEDMKTIDRFGPIMIGVFVFFFVFLIAGVSFLRERTTGTLERLLSTPLKRWEIVLGYVCGFGIFTVFQALLISWFSIQVLGIMMAGSFGYVLLLTLLLSMSALTLGTLLSAYAANELQMIQFIPLIIVPQIFLSGLFPMDTLPLWLQRVGLATPIYYGSEALMNIMIRGKGWSAIALDVYALIGFSLLFMLLNVLALRKHRKM
>NZ_CP048429.1|WP_062523341.1|520393_521092_+|TetR/AcrR-family-transcriptional-regulator
MEKKKADEQQGQEEWISELLAISEEEKMTPKQLAILQAGIEVFSEKGYAAAATSEIAQRAGVAEGTIFRYYKTKKDLLLSIVSPAMTKMIAPFVLRNFDGVLDVPFDSYEAFMRAFMVNRLEFARKNFKILRIFVQEIPFQPALREQFIENVIGKVLERVTAITEHFKAKGEVIDAPTPSIIRFTISSIIGYLLARLLLLPDKDWDDETEISLTLDFMLHGIAGPALRREEQ
>NZ_CP048429.1|WP_062523342.1|521282_525308_+|hypothetical-protein
MRIMRLAAAFFATSLLVVILPWIARADVSDSDATLKIFYEGAGTLSPAFSPEITEYTVHMRSSEPGYYTAATLSNEDASLAYSMNGSPWTPIGNYVSTGYLPTQRGNNTFQFKVTSSDNSTSKIYTAQVFYPNTNDANLWNLSVSPGSISPAFNPSTTAYTLNVPYATNSLGVNALADDPAASIKINGNPVLSGVSSSVPLNVGSNMVYVEVKSQDTSITKTYYLTVTRALPSTNADLSALSVQGHSLIPAFQSGVTAYALQDLGYDTGTIAVTPTASDSTAAISIQNSQGGYDPIPSGSLSAPLALSPGDNTIVIKVTAQDGLTEKLYSLNVHRKSNNALLSQLTALPGGLKESFTSHVFTYTLGDLTTDSLTVTPTLADTKGLVQISVNNGSYTPVSNGQGATVPLAAGTHTIHVKVSAEDTSYTNVYQLTVKRVQDSTLSPVSGTFDKYALNTAAGHYHDAETVLSLNGNLLTGLKLGTAVLDHAAYTLSGSTLTLHKEYLSTLAAGEHVFELVMDAGSHPLFTVAVKDTTPPVMAAPTAGDAAVTLKWAPVSGATGYKVFASTVPGTYGTVLAALGAGADSYSAAGLTNGTTYYFVVKAVNGGGDSAASAEVSATPQVPAPGGPVVQAVTAGDGQVHLVWEPVSGATGYNVYTSTTSGEYGAAAGTVAAAVYSYDAVGLTNGTTYYFVVKAVNGGGSSAASAEVSATPQVPVPGAPVLQTAVPGNGTVSLYWEPAAGASGYTIYQSTVPGNYDQPAGTVAGSVYSYNATGLTNGTKYYFTVKAANPGGGSALSNEASATPRTIPAAPAILSTTAGDGQVTIAFAAPADNGGSSVTSYEITASPGGSITTGSASPVTVTGLVNGTAYTFTVKAINGAGIGPASGPSNAVIPMAPASGERDPAEPAPPVTSRVPVAPAKEAPAPEVLTYVNGKIEDLSALSTVLTDNRQHSIVTLDQGKLDRILAEHPPGAEISVEFNNRSEVQAVELNGLLLRHLQQKQVAISVHTAKAAYRIPLQLISWDTVAGQPGTNTSAADVRIQIEIAAPHASLAGTARTAAAEGSFTYLAGPLDFSVNIINGSHTSGLSGFSAYVQRSFALPAGTDTSRATGIAIEPDGTVRHVPTRIVMQNGGYAAVISSLTNSTYAIVSHPVEFKDMAGHWAKAAVNDLGARMIAGGGGNGLFLPGREITRAEFAAVLVRGLGLPAVDGTSPFTDVSSSDWYSSAVQTASRHQLITGFEDGSFRPGDSITREQAMTMLAQAMQLTGLPAGNTGSSAAELPGGFTDGDEASAWALDSIAASLQAGLISGRSGTELAPQSHVTRAEAAVMLQRLLQKSGLIQ
>NZ_CP048429.1|WP_074648409.1|525469_528823_+|DEAD/DEAH-box-helicase-family-protein
MSFYVPERVIRLLCGKTAFERGSEDYEAGKVLLSAVENYEGLEYSKYQATVYGLEPYDVTLTIDSDGDVNGKCSCPAYHHGGPFCKHIAAVLVAILYEEDGDGPLAAQETTAGRNKPEVLTGKTGVLFPRDLPDRNRSGSTAVTSGRHLVSSMLELFENQRQRPSGAGAYVDIRTPLQVEFICKPFSCNFGSRMLGIELKVGPKRLYIVQKIRAFLERVHHGGPFEFSKHFVYDPALHSFSKEDDAVLLKLIEILLNERVYRDNIGPYSSYAGSLGGERLLAIPPFFWESLLPLLAASSSVYLQIGETLTPGIQVSDELLPLNFQFEQAENDGYRLDIQGLAQLTVLEDYGLVLSEGKLLKLPAQECRRLSELKKMLAESRTSGIDIVPGQMEPFMDKVIPGLKKLGQVHIADSIADRIVQTQLQARLYLDRVRDRLLAGLEFQYGTIVINPLDEQARERGHEVILMRDGEAERRILELMAHESFARTESGYIMTGEEGEYDFLYHTIPLLEPLLQVYATTAVKERLATGMYTPKASLTWNEKTDWLDFKFAMDGIPESDIVLVLKSLQEKRKYYRLPDGALLPLETAELQEIIALMNDLGVHAVDIKSPEFSLPLARGLHMNADAAKGGTDAVSIGRSFRRLLANMHSPENLDFPVPETLAPVLRDYQQYGFQWMKTLAHYRFGGILADDMGLGKTLQSIAFLLSELENIRQTGLPALIVAPASLLYNWQNELKRFAPQIRAAIADGNLAVRSKTVRNAAGCDVLITSYPLLRRDVELYVKRSFHTLILDEAQMIKNHATQTAQAVKALQARYRFALTGTPVENALEDLWSIYGIVFPGLFPGKKAFHDLPRETVAKRVRPFLLRRLKSDVLKELPDKIETLQASELLPEQKKLYVAYLARLRKEALKHLDSDGFGNGRIKVLAGLTRLRQLCCHPALFVDGYAGGSGKFEQLLEIIEECRSSGKRMLIFSQFTEMLGMISRELGLQAVPHFYLDGQTPSSKRVELCGRFNEGERDLFLISLKAGGTGLNLTGADTVILYDLWWNPAVEQQAADRAHRIGQKKVVQVIRLIAQGTVEDKMYELQQKKMNLIDEVIEPGQEALSSLSEQDIREILMI

Crispr_ID: NZ_CP048429_4

• CRISPR_ID: NZ_CP048429_4
• CRISPR_location: 773132-773205
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_4

Consensus_repeat	Method
CAAGTGGAAAAAGGGAACTTATT	CRISPRCasFinder

spacers of NZ_CP048429_4

>4.1|773155|28|NZ_CP048429|CRISPRCasFinder
CCTCCCCCAAATCACCAATTGTAGGATT

CRISPR arrays and Neighbor proteins around NZ_CP048429_4

CRISPR arrays

The CRISPR arrays of NZ_CP048429_4

>merge|NZ_CP048429|4|773132-773205|CRISPRCasFinder
CAAGTGGAAAAAGGGAACTTATTCCTCCCCCAAATCACCAATTGTAGGATTTAAGTGGAAAAAGGGAACTTATT

>NZ_CP048429|4|4|773132-773205|CRISPRCasFinder
CAAGTGGAAAAAGGGAACTTATT	CCTCCCCCAAATCACCAATTGTAGGATT
TAAGTGGAAAAAGGGAACTTATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062523709.1|764179_769261_-|family-16-glycosylhydrolase	unknown	unknown	gnl|CDD|185693
NZ_CP048429.1|WP_062523805.1|769502_770522_+|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP048429.1|WP_062523701.1|782241_783351_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062523804.1|771612_772629_-|ketoacyl-ACP-synthase-III	unknown	unknown	gnl|CDD|237245
NZ_CP048429.1|WP_062523711.1|762068_763268_-|glycine-betaine/L-proline-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226643
NZ_CP048429.1|WP_062523702.1|781900_782212_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_025708469.1|759461_760073_-|VTT-domain-containing-protein	unknown	unknown	gnl|CDD|378149
NZ_CP048429.1|WP_062523803.1|776716_778270_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270298
NZ_CP048429.1|WP_062523710.1|763526_764084_+|hypothetical-protein	unknown	unknown	gnl|CDD|224427
NZ_CP048429.1|WP_062523713.1|760352_761225_-|glycine-betaine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270357
NZ_CP048429.1|WP_062523700.1|783443_784964_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270298
NZ_CP048429.1|WP_062523699.1|785146_787486_+|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197666
NZ_CP048429.1|WP_062523706.1|774702_775578_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP048429.1|WP_083351110.1|773493_774615_-|glycoside-hydrolase-105-family-protein	unknown	unknown	gnl|CDD|226678
NZ_CP048429.1|WP_062523712.1|761238_762072_-|proline/glycine-betaine-ABC-transporter-permease	unknown	unknown	gnl|CDD|226644
NZ_CP048429.1|WP_082722684.1|758064_759279_-|sporulation-protein-YunB	unknown	unknown	gnl|CDD|131879
NZ_CP048429.1|WP_143013467.1|772846_773047_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062523705.1|775599_776568_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
NZ_CP048429.1|WP_163704287.1|780832_781810_-|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|377924
NZ_CP048429.1|WP_062523704.1|779147_780545_-|transcriptional-regulator	unknown	unknown	gnl|CDD|274228

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062523709.1|764179_769261_-|family-16-glycosylhydrolase	gnl|CDD|185693	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.	1.89646e-103
NZ_CP048429.1|WP_062523805.1|769502_770522_+|LacI-family-DNA-binding-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.73606e-103
NZ_CP048429.1|WP_062523804.1|771612_772629_-|ketoacyl-ACP-synthase-III	gnl|CDD|237245	PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed.	0
NZ_CP048429.1|WP_062523711.1|762068_763268_-|glycine-betaine/L-proline-ABC-transporter-ATP-binding-protein	gnl|CDD|226643	COG4175, ProV, ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism].	0
NZ_CP048429.1|WP_025708469.1|759461_760073_-|VTT-domain-containing-protein	gnl|CDD|378149	pfam09335, VTT, VMP1, TMEM41, and TVP38 (VTT) domain. The VTT domain was previously called the SNARE-associated domain, but was renamed as there seems to be no evidence for association with SNARE proteins.	2.91385e-18
NZ_CP048429.1|WP_062523803.1|776716_778270_-|extracellular-solute-binding-protein	gnl|CDD|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	5.9216e-116
NZ_CP048429.1|WP_062523710.1|763526_764084_+|hypothetical-protein	gnl|CDD|224427	COG1510, COG1510, Predicted transcriptional regulators [Transcription].	1.52062e-38
NZ_CP048429.1|WP_062523713.1|760352_761225_-|glycine-betaine-ABC-transporter-substrate-binding-protein	gnl|CDD|270357	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to betaine compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine and proline betaine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.17033e-135
NZ_CP048429.1|WP_062523700.1|783443_784964_-|extracellular-solute-binding-protein	gnl|CDD|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	7.41929e-119
NZ_CP048429.1|WP_062523699.1|785146_787486_+|AraC-family-transcriptional-regulator	gnl|CDD|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	6.35564e-24
NZ_CP048429.1|WP_062523706.1|774702_775578_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.09128e-66
NZ_CP048429.1|WP_083351110.1|773493_774615_-|glycoside-hydrolase-105-family-protein	gnl|CDD|226678	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only].	4.26009e-128
NZ_CP048429.1|WP_062523712.1|761238_762072_-|proline/glycine-betaine-ABC-transporter-permease	gnl|CDD|226644	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].	8.00708e-122
NZ_CP048429.1|WP_082722684.1|758064_759279_-|sporulation-protein-YunB	gnl|CDD|131879	TIGR02832, conserved_hypothetical_protein, sporulation protein YunB. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. Mutation of this sigma E-regulated gene, designated yunB, has been shown to cause a sporulation defect. [Cellular processes, Sporulation and germination].	7.75512e-45
NZ_CP048429.1|WP_062523705.1|775599_776568_-|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.02315e-143
NZ_CP048429.1|WP_163704287.1|780832_781810_-|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl|CDD|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	1.75951e-23
NZ_CP048429.1|WP_062523704.1|779147_780545_-|transcriptional-regulator	gnl|CDD|274228	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other].	0.000104084

Protein sequences

>NZ_CP048429.1|WP_143013467.1|772846_773047_-|hypothetical-protein
MEGGVWLAFDIVGYRVLRDSMVPAKNPAPGAPDLMTGLEPVRDRGFYLQYVIDVQFPRVTVEPLNS
>NZ_CP048429.1|WP_062523804.1|771612_772629_-|ketoacyl-ACP-synthase-III
MLLNGAKITAIGSYVPARRLTNSDLEQMVDTNDEWIVQRTGIRERRISREDEYTSDLCTAAVLDLMKRYGKSIQDVDMILVATSTPDFPFPSVASILQNRLGIPATAGALDMSAACAGFVYALHTAHAYVASGLHRKVLVLGADTLSKITDYTDRSTCILFGDGAGAVLVESSEQLDGFAGFHLGSDGSGAHHVYRTGLSRSVNEVELSDTGKLVQNGREVFRWAVRTVPQGVQQVLNNAGTSLDQVDWFIPHSANLRMIEPICERLNYPLEQALYSLEYFGNTSAASIPLALDLGVREGKVLNGQQVLLYGFGAGLTHAGQLVKLELAPEVSPPTPL
>NZ_CP048429.1|WP_062523805.1|769502_770522_+|LacI-family-DNA-binding-transcriptional-regulator
MNIKKIAEMAGVSVSTVSKIMNNYSDVSEKTKKRVMEIIEQTGYSPSNSAKTLATKKSNLIGVIFAGELNVEFTHPFFVEVLNSFKKQMGVLGYDLIFFSNEKFISSGDYYSRCLHFNVDGCVIISGQKMEPAIRDLDMSSIPCIGVDLELRGKKSGYVMSDNVQIASKVVEHFYLLGHRELGFIGSTADSDISNQREAGFVKAVESFGLTLNRNWFVHGDDFFESSGYTAMRRLLESGSSMPKAVFAASDLLALGAIRALKEQGLRIPEDVAIIGCDDIEACKYTSPTLTTIRQNKERLGVLAAHMLYDLINNQSDGGSFVVEPALIVRESCGSRLSG
>NZ_CP048429.1|WP_062523709.1|764179_769261_-|family-16-glycosylhydrolase
MKKKVSGLLTAMTLLSGLLSPLGSGGHIAEAALGQPVEVADSAVQTGSITAAGGKTSAYNELKAFTDVPADSWAARPVQRWIENGIVGGYGDGTFRPGAPVSKAEFAVIINRIFNYNAEAATLPGDVSAAAWFSSDIAKGIAAGYLIAGKDGRIEASAPLTRAEAVVALQKIFRLDIGGQAAYSDLAGADNEVKDAAAALSGAGYIKGYPDGSFKPQGRITRAELAQMVDRLVPGLVRSKGEITLGKVQGNVVLSHADITLKDTVVEGNLYLSEGIGEGKIILEGVKVTGTTFILGGGEQGVSLQNSVIGRVLAAKPDGNLRMYASGTTSVGTVLLNSGATLEENGLTGAGFTDVEISSAVKAAVLKGSFTAVSTSSSATGSVKLTLSGKVGKLTLGSPSQVVLADHAQVAELLLAAAAKGTAIQGSGSFGAVVNNAEGVTVSGAPLKPGSSGPVAVPPAATQAPAGGSGTSPTATPTATATPTATATPTATATPTATATPTATATPTATATPTTTATPTPTPPADPWTLVWSDEFNDDTIDPAKWTYDLGDGTAVGNPGWGNNELEWYTNEEKNVKEADGKLVITARKEAQGGKEYTSSRIKTKDLFSKKYGKFEIRAKAPVGKGYWPAIWMLPEDYVYGSWAASGEIDIMEGWGSRPGTVAGTLHYGSQWPDNVYSGKEYVLPGNSTIEQFHTYSLEWEPGEIRWYVDGVLYSTKNDWYSRSNGQPANNAYPAPFNQEFHLLMNLAVGGNFDGNPTAETVFPQSMEIDYVRVYELTGRPYRQPVPVTLTKEPYLEGSLPPLADGNLIHNNGFTEQKEGDAGMGIPNTAHWVLYKEAGADAALSLEPIGGQNFLKVNISSPGGNSYSIQPQAIVSLAKGRFYKLSFDAMTDISRNISVRLTGGESRGYQAYSPSLKADLTSSLKHYETMFQMKENSDIAARVEFNLGTNASPVWLGNARLEEIDSIPFDHDSAKTPLGSGNHLYNGTFDLGEPDRLSYWHAEATGGAEVSPSVGDTGKLNLQISGIDTGNADTMLLQKGIFLVQGQDYKLAFDADVPSPRTAVIELQGRDGTVYASETVLLKAGAQKVEAVFPDLPGATDTLGRFVLHLGKEAGIVQLDNFLLLRTSFYYDPSLVYYPLVNGDFSFGFNSWERLLTEQGGAATAAVTEGAATFNIANTGNQPYSVMLFQNGLKVAGGMDYVIEFDASASVARRISVNAENASYQPSFAQIIKVTPETTHYRFEFRQGVSDTLSLKFLLGKVEGVSIPQAHELVIDNVKFEIKNAPAKPQELLADSTNNRVSQPIELTFTENAAWRSSITAVKVNGTALAKGQYTVQAGQITLEAAAFPAEGSYLITVEAEGYVSATVTQTILANDNNLVVNGSFASGTTGWSTWSGEGGVSSFNVNEGVAEVRIDVAGTAAWHTQFFQEGIPLEAGKTYELSFKAKSTVPRQIIVEYSGTSAAAAQAKFEVTATWATYSAEFTVDNSNPLKLNYLIGAAMGADKTANGMPHTLSFDDIRVTEVEGGGGTPGEPASGKLDNGTFDPAKGLTGWTQYFDGTGSAAAQDGELAVALTGTGTASYSAQVDYANLKLVQGKTYTLAFAARSDVDRLIEVAVEHKGGDYTKYLPAKAVELTGSMKTYSYTFTMDSGTDAGAHLVFLLGLIAGNSEGTNSAIQAGNHIFIDNVSLTEAP
>NZ_CP048429.1|WP_062523710.1|763526_764084_+|hypothetical-protein
MNDLEGLAPEQVERISKARERVIDSIGKNMDLYGITLSIGHLYGYMYFNQGPVTLDELSRTMGMSKTSMSTGVRTLLDLKMIDKVWGKGTRKDLFEVVPDWHQNFSDYFSIKWRKAVEGNMAALSKSLNEIKQMKIEYADEPGMEQLLSTDEVKIEEAIKYYRWLLKLIEALETGKIFELIPKES
>NZ_CP048429.1|WP_062523711.1|762068_763268_-|glycine-betaine/L-proline-ABC-transporter-ATP-binding-protein
MAIIEVKQLTKVFGHDAVRALPLLAQGWSKEKIAREAKLTVGVNRADFRIEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTGGQVLFRDKDVVKMNPEQLRQFRRKNIGMVFQKFALFPHRTVLANAEYGLEVQGVEKKERTRLAMEALELVGLKGWEHHRPDQLSGGMQQRVGLARGLANNPDILLMDEAFSALDPLIRKDMQQELLELQSKMKKTIVFITHDLDEALRIGDRIALMKDGVIVQIGTPEEILIQPANKYVERFVEDVDLSKVLTAAHVMRQPEMIRPERGPRVALQLMRDSGVSSLYVADKEMKLQGVVTAEDAAQALKGNQSILEVMRREIPRVSPDTLLNDLFELMSGTHLPVAVVDEADKLKGIVIKGAVLSALAGNAVPEGDGIR
>NZ_CP048429.1|WP_062523712.1|761238_762072_-|proline/glycine-betaine-ABC-transporter-permease
MSIPKLPLGKAVEWLENWLTTYLGPLFDFIHAVIGGMVNGIEMALTILPALVLILIITALAYWIGKWRMALFALAGLLLIDNLGLWGPSMQSLALVLTASVLAVLIGVPLGVLCAQSTGVQNTVTPILDFMQTMPAFVYLLPAVSFFSLGVVPGVIASIIFAIPPTIRLTNLGIRQVSPELVEAADAFGSTAGQKLFKLQLPIALPTIMAGINQTIMLSLSMVVISSMIGAQGVGAYVYRAVSQAKTGAGFEAGIAIVIIAILLDRLTQKLVKPKKG
>NZ_CP048429.1|WP_062523713.1|760352_761225_-|glycine-betaine-ABC-transporter-substrate-binding-protein
MKKKSWGILMLILLAAVAAGCSSSSSKANQTVKLAYVAWDSEIASTNVVKEVLESKLGATVEMLQVDAGPMWAGIADGSADGMVAAWLPGTHASYLEKYGQDMEDLGANLEGTKTGFAVPAYMNVSSIEDLKNAGVAKSLNNQIIGIEPGAGIMTASQKAIDAYGLSDYTLLESSSAAMAQELQKAYTDNKPIVVTGWTPHWMFANMDLKYLEDPKGIFGGAEQIHTMVRKGLKEDMPDVYRFLDQFQWTPEDMAQVMVEIQGGKSPEDAAKAWVSEHEDQVNTWIAGIK
>NZ_CP048429.1|WP_025708469.1|759461_760073_-|VTT-domain-containing-protein
MTETINAWIDWLLQLFGLSGPYILLVTIPLTVLQSLFGFFPLAVLIVLHVSVFNVIGGMLVSWLACNIGAMLSYFLFRRFLFDWFDRKWRSKLKRYDKWQRYLDRYGIWTLVLLRTVPIMPSNIINFMSAVSPMKVPAFIWGTVLGNLSYIWLFGTIGSTLIVSREEWNGFLLWYGVFVVILIGIFIRLHWGHLQEDKRSRME
>NZ_CP048429.1|WP_082722684.1|758064_759279_-|sporulation-protein-YunB
MGRIKKWGSRSAKVPNLGRLRLPRLGWGGIPGAAGRSPAFKAKPSKEGIPVLAGRSPAFRAKPSKEGILGPAGRSPVFKAKPSKAGSRLSGQGLRYGKPKGRRFLRLPGSGEGEKAGAGSSVRSQKPRRRGRFWLILSLVLVLAVLQSLRYVEKHLKPPILHLAQIRVKQIATESINKAITTQVADTGNAEALIDWKTDKEGKISGFMLNYKEHMRITSQAAEVIQSTLQELHNQTERIPLGQALGSSLIASFGPDVPIKIEPQGAVKVELNTRQKDAGINMILVEVYIHIVTEVAVIIPFDMEPQVVDTEIPVSYLMVVGDVPMYYYDNQGQPVGDNGSSAPGIAIPAPSVDENKAGTTVPDSSNAETGNSPGEATPSPDSGAADTGHTEEETGSSSPEAGGE
>NZ_CP048429.1|WP_083351110.1|773493_774615_-|glycoside-hydrolase-105-family-protein
MIGSLPSTPMEWAQQACDSLMDTYTAGELPPAHRWHYHQGVFLCGMELLWEAIREDRYIEYIQQYVDDLVDENGNLYFARDELDAVQAGLLLFNLHERTGKQKYRIAADKLRNLLLTLNRTSEGGYWHKDKYPNQMWLDGLYMAGVFSLKYANAYGEASLRETVLHQERLMRRHMKDEATGLLYHAWDESKRMPWANPRTGCSPEFWSRSLGWYGLAVSQFLDLLPAGDPGRAELAAELSGFVEALIRYQDGGSGLWYQVADKGGQPDNWLETSGSCLFVYTIAKAVKHGIAPPGALAAARKGYEGLIQVLQQDEQGRLILPDICIGTSAGDYENYVTRPKVSNDLHGVGALVMACVEMQSLYGVAEAADCGL
>NZ_CP048429.1|WP_062523706.1|774702_775578_-|carbohydrate-ABC-transporter-permease
MVEDRTIGGRLFAAVNFTLLAIITLITVLPFIHVVAGSFTTSAELATSKFVLFPKVWSFEAYTFIFSTNTIIKSMGVSIGVTLVGTLFSMFITALMAYGLSRRDLDGRNVFNFLVVFTMLFHGGMIPTFLVVKELGLIDSYAALILPSAISAFNMIILKNFFQNIPEGLEESAKIDGCNDFGILFRIVLPLSLPAIATISLFYAVTYWNTYMSAILYLDDSAKWPIQVLLRQIVVLASGMDYSASLDATNPPPDQTIKMAVIVVATLPILMIYPFLQKHFAKGAMLGSMKG
>NZ_CP048429.1|WP_062523705.1|775599_776568_-|sugar-ABC-transporter-permease
MQEVSAQPGVVPELKPKSYKSSSELKKRLWRNKLLYVMLLPGVLYFVIFKYLPMYGLIISFQDYKPYQGITGSEWVGMEHFQRLFTEPDFLNILGNTLILFGMNILFYFPIPIILALMLNELRGTFFKRTFQTLIYLPHFMSWVIVVSISFVMTTMDGGIINELLSYFGFEKINFLLSPGWFRPMYIIQIIWREAGWGTIIYLASIAAIDPGLYEAARMDGAGRLRQIWHITLPAIRGVIITLLILKIGSVLDLGFEHVYLLLNSMNREVAEIIDTYVYTAGLRQGHFSYSTAIGFFKSIIGLIMVMSVNKLSKKMGEEGVY
>NZ_CP048429.1|WP_062523803.1|776716_778270_-|extracellular-solute-binding-protein
MNKKSFTLLLSALLTFSMLTACSGNNNKNNEAAPSNAGTSGGTDTATTAPEPEKPTEIKIMLPLNTTETPPDTIKTEVEKLTHTKLTYQFYPADTYEEKLNSSFATGSLPQVTYLKNQTTFIQMKESMKDGQFWEIGPLLSEFPNLNKLKPEILNNTKVDGKLYTLYIGRPLARQGIIYRKDWADKLGLKPPANVDELFAMAKAFTEQDPDGNGKKDTTGIVDRNELVYGAFKTVSSWFGTPNSWGEKDGQLAPEFTFPQYFDTMDFFKKARDAGYMNQDFAATSKTDAVNMFVSGKAGMYIGGSMQDIDTLNKDLIKNFPDAVLDTHSMVAGPDGKFAQWMIPGYNNVVLFPKSAVKDEAGLKKILAFFDKMMTPEVANLMYWGIEGTHYTVVDGRAKPADDKELIEREVKGFKDSVIGEAETNGMYQSLNVLPGRIHAEELLLENVKVGVAYPTAALDSATYTSKGVELQQIISDATYKYIYGQIDKAGFEKEVQAWKERGGEKIIEEYNAVYKK
>NZ_CP048429.1|WP_062523704.1|779147_780545_-|transcriptional-regulator
MEATTTILAELEEYLRRGSVTISQFAKDSNMHSGTLSNILHGRRPIAMQQLDRITQAMGHDEGFFYDLYIDNYIIDSSQDWRRIGPLLHRCADLNKLDCIQRIVQHVMDNLLYSPMLFDTAEELFAKDRLAAAALLYEFVAESERSQHSERLALCQYRLFTIALGDNQNENLRAADRFEPFVERLDEVDQLDALKELANTYRSLQRWDKVDELAVKMGRKARIQYDLQHGPHRKSKESHKAPGRPLFFYIAYSDLLRGNVCDELGDYEQALIHKYAYADLGWVKEQGEEVDYWKSLFIEWSEANVYITRLLSGDSKVIEPYANYIDMKKGELTIGLLYILKAANKYQFNVDDILYRFSQDIETNFNELIQGRYSRKLALDRQANLMFEIALYLLYKKDYSNGFRFLLDAVKNFKQINNEKYTLECVTLFERFRKAATQEILDRYQILLLGGTSYEEKDSIALYPH
>NZ_CP048429.1|WP_163704287.1|780832_781810_-|copper-amine-oxidase-N-terminal-domain-containing-protein
MLKRLSILAMICVLVFSVGLIPAPASAASKGSHIFVDGVPLNSRSVSKNGVSFVPFRELFEKLKMNIDYNAKLKQVTGTKGDLKITFTLGSTTAYVNGNKKALQAAPFAQNGTTLIPVRIVGEATGNAVYYSAAADVIQINSPSFKGASYTIEGIPILFKANGAVLIGPRALEDMNQQKELAEIDAIKEFTANAPKVRIVGVPPTQEQSKEPGYKGYPDYFDANYATAVGNKETLPPLMSEGWISLAMLSEIEKISNLGNSDSNILSIGKYVGMNIVRCNIVMTDEYKKAKTGEFTLSDIRVKKYKGTMYLNIEDLKAAGLIESN
>NZ_CP048429.1|WP_062523702.1|781900_782212_+|hypothetical-protein
MSLTTLSLRLRPLRLYILLNNQIAAAASPLLHLLAEAFGRDIAQNIIVGRVDDDGRQLGVFFVKGGRAEADGRVIDQELLVVFAELIGEGGMLGGGTINNPTA
>NZ_CP048429.1|WP_062523701.1|782241_783351_-|hypothetical-protein
MILAKLLVELLTENQLEDEELICWNKIDLGKFEVLDDAPLELDKSSFVNLRHKAALLANIITDSSQIEYPLDRMKRHRHEINGGYKIAKRRGARLNEVEVYNLLFRFTDPKRRDAIAIMYRTERFGVEKILLLPDKTQTRFKQECRSYLNEAAYLVLRQKMDPDDQSELIENLRCLNVHERCAQTLQHEFGHVLHWREWDTLDIHNERDILTWFLEYGYYEIVDRRVPGFSEMNIFEKLLILKESLVEDYRISLNIKAERGKFILPNKFCFTGDFEKPNLMYEGVEIMKRMLDDQISDIRHRSASSSDYDSLKAFAVIQRRRRHNPNWVAGESSITTETIKSDYKQLDAFFEVASTSEKVEAPVKTIHS
>NZ_CP048429.1|WP_062523700.1|783443_784964_-|extracellular-solute-binding-protein
MFRQGLGPRGARYSSVLVLLVVIMLSACSSEDAGRSSPGGEVPSISILAPLHFPQTPAKDIVAEINKLTGVRLEITWVPEGVYTDKMNTAMATGSLGKVTFVKVTDYNLVKNAIRSGAFWEIGPYLKDFPNLKQLDPAILNQTAVDGKFYGLYTERPSSRQGIIIRKDWLDRLHLNKPQTLEELYHVMQQFTYNDPDGNGKADTLGLVDRNDLVYGVFKTLSSYFGTPNNWKLVKGRFIPEFETPEYMDTMNFMKRLYKEKIINQDFALTSKEVQRDKFIRGGAGIFIGSMTDVQRLSIEAQAINPAAELTLINRIKGPEGYKVWSIPNYNGLYLFSKKAIATEAELKEVLGFFDRTMDKDVANLMKYGFEGRHYKLEDGKVILPEETSQLRVNEVSPLYSLMIADIGNRNIMEVVQKEQLTALADQLSEDNEQFLVDDPTVSLSSPTFDEKNTELSTIIVDATYNYILGNITAEGFRQEVEKWRSSGGELIIQEYGEAARVEEIG
>NZ_CP048429.1|WP_062523699.1|785146_787486_+|AraC-family-transcriptional-regulator
MKHLSFLSKLTIFAFVLSTLPVLFIGSFSYFTSSSEIQKNVNLSKMELILQITSNVEHKLATVNQTLNQVVNSSVLKKALNNPLNVTDFILYNDIRTEIRNMQSFDTKLEDVILLNQRQNWMIKNSGLYRLNEYKNYEQLTNLINLPDESSWVLNPSSLFYSEESINVTGCAYSISLIKKLPTTKLQKYGLAMANIPACSLQDFINSDVQPLGSIIVLDSSGRILLHPDRTLIGQPAAASGFTEFAQLTGALTPSGQFKTEMDNKDYSITYMRSQQSGWIYLSVTSIASLTKESDKIGTYTIYVSTLMLLLSVLLAWLGSRKMYTPIERLLNQMGQRRPDIRKRHTNEFQIIGEQVHHLFQSKSQLEKEVAQHLRQVRTFGLIKAFQGHIKKRELLEELEQFGYHAQLEEWQTMAVITVSIDFSGENSYQKKDLSLLLFAVHNMIEELVPSSNRLTPVIMDHAVVTLIGSADGHAESFHKMLYSLTESLQQTINNYLKLEASIGLSLPFHAFDKMSIAYREGLEALKHRITLGKGIIIQYENINSGNHYLNLSYPVHKENDLMDAIKLADAGKAKEVLHKVFSCIFAPGLSPQEYQIPLTRLLNNLLIMMQESGISLNQIHPGNGSLFEELTDIHIVAEIEDWFWTVVIQPMIRIFGSRQNAQYHNISEKLIDIVQHDYDKDLTLEECASRLHYNANYISSVFRKETQYYFSEYLAMYRFKMAKKWLEETDMPVKDIAARLRYNNSQNFIRSFRKQEGMTPGQYRENAGARQRAVPDDY

Crispr_ID: NZ_CP048429_5

• CRISPR_ID: NZ_CP048429_5
• CRISPR_location: 920566-920639
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_5

Consensus_repeat	Method
AAGTGGAAAAAGGGTAACTAATT	CRISPRCasFinder

spacers of NZ_CP048429_5

>5.1|920589|28|NZ_CP048429|CRISPRCasFinder
TGCCCGGGCACCCTGTTCTTCGCAGGTT

CRISPR arrays and Neighbor proteins around NZ_CP048429_5

CRISPR arrays

The CRISPR arrays of NZ_CP048429_5

>merge|NZ_CP048429|5|920566-920639|CRISPRCasFinder
AAGTGGAAAAAGGGTAACTAATTTGCCCGGGCACCCTGTTCTTCGCAGGTTAAGTGGAAAAAGGCTAACTAATT

>NZ_CP048429|5|5|920566-920639|CRISPRCasFinder
AAGTGGAAAAAGGGTAACTAATT	TGCCCGGGCACCCTGTTCTTCGCAGGTT
AAGTGGAAAAAGGCTAACTAATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_020426267.1|919750_920038_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl|CDD|178810
NZ_CP048429.1|WP_062519002.1|923157_923349_-|transcriptional-regulator	unknown	unknown	gnl|CDD|379161
NZ_CP048429.1|WP_082722500.1|923923_924466_-|RNA-polymerase-sigma-factor-SigY	unknown	unknown	gnl|CDD|182010
NZ_CP048429.1|WP_062519013.1|916169_916640_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379326
NZ_CP048429.1|WP_062519018.1|911183_911549_+|hypothetical-protein	unknown	unknown	gnl|CDD|179504
NZ_CP048429.1|WP_062518995.1|924889_925519_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293792
NZ_CP048429.1|WP_062521837.1|902142_902829_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP048429.1|WP_062519000.1|923398_923620_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_157243729.1|924524_924701_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062519010.1|918271_919729_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl|CDD|234572
NZ_CP048429.1|WP_062519007.1|920938_921322_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_020426262.1|913645_914077_-|transcriptional-repressor	unknown	unknown	gnl|CDD|223806
NZ_CP048429.1|WP_062519015.1|911716_913438_-|glycosyl-hydrolase	unknown	unknown	gnl|CDD|119353
NZ_CP048429.1|WP_082722502.1|914202_915372_-|DUF4097-family-beta-strand-repeat-protein	unknown	unknown	gnl|CDD|372574
NZ_CP048429.1|WP_062519020.1|910179_911055_-|hypothetical-protein	unknown	unknown	gnl|CDD|379641
NZ_CP048429.1|WP_143013593.1|916737_918177_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl|CDD|235489
NZ_CP048429.1|WP_062519004.1|922246_923158_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP048429.1|WP_062518993.1|925525_926092_-|thioredoxin-family-protein	unknown	unknown	gnl|CDD|379658
NZ_CP048429.1|WP_062518998.1|923616_923943_-|YxlC-family-protein	unknown	unknown	gnl|CDD|375100
NZ_CP048429.1|WP_062519006.1|921479_922250_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|372253

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_020426267.1|919750_920038_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl|CDD|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	6.14862e-37
NZ_CP048429.1|WP_062519002.1|923157_923349_-|transcriptional-regulator	gnl|CDD|379161	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal. This family is often found at the very N-terminus of proteins from the phospholipase_D-nuclease family, PLDc, pfam00614. However, a large number of members are full-length within this family.	6.80831e-05
NZ_CP048429.1|WP_082722500.1|923923_924466_-|RNA-polymerase-sigma-factor-SigY	gnl|CDD|182010	PRK09638, PRK09638, RNA polymerase sigma factor SigY; Reviewed.	3.42543e-71
NZ_CP048429.1|WP_062519013.1|916169_916640_-|GNAT-family-N-acetyltransferase	gnl|CDD|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.37068e-08
NZ_CP048429.1|WP_062519018.1|911183_911549_+|hypothetical-protein	gnl|CDD|179504	PRK02935, PRK02935, hypothetical protein; Provisional.	1.5549e-47
NZ_CP048429.1|WP_062521837.1|902142_902829_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.84092e-73
NZ_CP048429.1|WP_062518995.1|924889_925519_-|MBL-fold-metallo-hydrolase	gnl|CDD|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	2.26039e-70
NZ_CP048429.1|WP_062519010.1|918271_919729_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl|CDD|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP048429.1|WP_062518998.1|923616_923943_-|YxlC-family-protein	gnl|CDD|375100	pfam17280, DUF5345, Family of unknown function (DUF5345). This is a family of unknown function. It is found mostly in Bacteria. Members of this family are predicted to contain 2 trans-membrane regions.	7.12722e-18
NZ_CP048429.1|WP_020426262.1|913645_914077_-|transcriptional-repressor	gnl|CDD|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	9.5543e-51
NZ_CP048429.1|WP_062519015.1|911716_913438_-|glycosyl-hydrolase	gnl|CDD|119353	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.	1.11567e-81
NZ_CP048429.1|WP_082722502.1|914202_915372_-|DUF4097-family-beta-strand-repeat-protein	gnl|CDD|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	7.64207e-11
NZ_CP048429.1|WP_062519020.1|910179_911055_-|hypothetical-protein	gnl|CDD|379641	pfam14540, NTF-like, Nucleotidyltransferase-like. Structural comparisons with Structure 1kny indicate that this N-terminal domain resembles a nucleotidyltransferase fold.	2.69926e-19
NZ_CP048429.1|WP_143013593.1|916737_918177_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl|CDD|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP048429.1|WP_062519004.1|922246_923158_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.41468e-95
NZ_CP048429.1|WP_062518993.1|925525_926092_-|thioredoxin-family-protein	gnl|CDD|379658	pfam14595, Thioredoxin_9, Thioredoxin.	1.77613e-48
NZ_CP048429.1|WP_062519006.1|921479_922250_-|ABC-transporter-permease-subunit	gnl|CDD|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	1.97703e-09

Protein sequences

>NZ_CP048429.1|WP_020426267.1|919750_920038_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MSITVHDVQHVAKLARLHLSPEEEAKLTEQMNAILQYAEKLNELDTENVKPTTHVLQVSNVMRDDVVKESLSQEEALLNAPEDEDGHFKVPAVLE
>NZ_CP048429.1|WP_062519010.1|918271_919729_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSLFQYRLPELHNMLHNKEISVGELTEESLAAIAERDGKVHAFLTLNEEGARASARELDDKLASGAARGLLFGLPAGIKDNIVTKGLRTTCASQFLSNFQPIYDATVVSKLRQADAVTIGKLNMDEFAMGGSNENSSFGPVRNPWDLERVPGGSSGGSAAAVAAGEVLFALGSDTGGSIRQPASYCGVVGLKPTYGLVSRYGLVAFASSLDQIGPITRNVEDSAYVLQAIAGYDAQDSTSAKVDIPDYLSALTGDITGLRIAVPKEYIGEGVDASVRDTVLSALKVLESLGAVWEEVSLPHTEYAVATYYLLSSSEASSNLARFDGVRYGVRADDGGGLLELYHNSRSQGFGAEVKRRIMLGTYALSSGYYDAYYLKAQKVRTLIKQDFDEVFQKYDVVIGPTAPTTAFKLGSQIEDPLTMYLNDILTIPVSLAGIPAVSIPCGFAEGLPVGLQIIGKEFDERTVLRVAHAFEQHTDHHKQLPQL
>NZ_CP048429.1|WP_143013593.1|916737_918177_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MDMAKYETVIGLEVHVELHTKSKIFCGCSTEFGAPPNTHTCPVCLGHPGVLPVLNRQAVEYAMKAAMALNCTIGDVSKFDRKNYFYPDSPKAYQISQYDQPIGLNGWIDIEVDGETKRIGITRLHLEEDAGKLTHVDGGFASLVDFNRVGTPLIEIVSEPDLRSPEEARAYLEKIRAIMQYCDVSDVKMEEGSMRCDANISLRPEGQAEFGIRAELKNMNSFRGVLRGLEYEQFRQGEILDDGGVVVQETRRWDEAQGKTLSMRGKEEAHDYRYFPDPDLIVLHIDDAWKESIRASIPELPDARKSRYSTEYGLTAYDAGVLTSSKPLADFFEGSLAYTKDAKAVANWMMGDLLGYLNSGGLELSQVKITPQGLGEMIGLIAGGTISSKIAKTVFKEMLESGKLPAAIVEEKGLVQISDEGAIKQIVEAVVAANPQSVEDYKAGKQKAIGFLVGQVMKESKGKANPGLVNTLLAEVLNS
>NZ_CP048429.1|WP_062519013.1|916169_916640_-|GNAT-family-N-acetyltransferase
MSIIIRLDLQNGDILSELWSLQHKAYRLEAERIGFHEIPPLLETRDMLSRSKECFYGSFDDSGELMGAVAVQEESSGRLTVTRMMVNPDFFRQGVAGRLLEYIFGQYPDMDQFIVSTGKLNEPAVALYTKHGFVPAGLEEVAPGVELIEFHRSGRL
>NZ_CP048429.1|WP_082722502.1|914202_915372_-|DUF4097-family-beta-strand-repeat-protein
MLILLKWWPIIAVLWGLEYLFIYLFSRRLDRGRGRSRSRMDLRGLLSAVVLAACVFIVSEQEHYLHLWNRVSLNLTAAAVDYGEAKGSKFQKAPIVIPVELGTSKITVDGINGDILIHRAPVEDIEVATTVWVDQLEGAVAEAISEQSFVDVTEGNTIKIIPKSKAYGDSGKRQPRMDLEISLPEDRRFNLEVRTMNGGITLQNVEAIEDINMETGNGELILHRIFGNVKGKTLNGAVRARTVQGSVDLATSGGDMAAWDVTGALKLSTAVGNISAAGSGDQMELSSKNGNLEINGARSKLKAESLNGKIHIRSADFGGNWDIYSAVGDIDLYLPASGNYTVDGSSGYGDIVSDIPELTIDKKNISGEVGTGEFKLHVEGNSNLNVRKY
>NZ_CP048429.1|WP_020426262.1|913645_914077_-|transcriptional-repressor
MGSGVQHALEQLKTTGVRITPQRHAILSYLMEAMNHPTADDIYRALEPQFPSMSVATVYNNLKMFMEAGMVRELTYGDNSSRFDANVSDHYHVICQECGRIEDFSYSSLHEVEQRAEQATGFKIHGLRMELYGICKCCTEKTQ
>NZ_CP048429.1|WP_062519015.1|911716_913438_-|glycosyl-hydrolase
MNRRQRQRRVKKRGGLFRRLLGLVIIAAAAYWVVFYVLPNRLHTDPDWKGLEQPVFVKGELTGYSASGNGDALLLPLPLLQKYVDSSIRYEEDTKSVILSTNNELLYMQEDTKTASLNNKPLQLRLAPEEKNGMTYLPADTLENLYGFEVEENKDTGAVLLMTAGEKVPLGKVKGEEGGKTQPLRSEATIHAPIVADMSPGTVVRIWNADNEDWLYVQMDSGFTGYVKANDIIKGGEKAVDVKPATPSRAERSWKGKPVNLYWEAVYERKPNPAKFGALPGVNVVSPTWFEIVDIKGNVRSKADSAYVQWAHQQGMEVWGLLTNSFNADLTTQALSSYEKRMNAIVQMLEYADLYGLDGINIDFENVYTKDGENVTQFMRELKPMAQAKNLIVSMDVTPKSNSEMWSVFLDRRALGAVTDFLIVMAYDEHWASSPTAGSVASLPWVEKSVRRILEEDDVPAEKLILGIPLYTRIWSETIKDGKTKVSSKAVSMNAVQEILAEKKLKPVLDKDSGQNYVEYTEDGVLRKIWIEDKVSLKARVELAKSFGLGGIGSWNRSFAVPEAWETLQQISE
>NZ_CP048429.1|WP_062519018.1|911183_911549_+|hypothetical-protein
MKFKSAKINAFRTWGLLLTMLGMGLMILGTAGIVFWGSAGKVVAAIGLVIGLVSMIASLAIYFWAGMLSTSAVQVECPECHKLTKMLGKTDRCMFCHTILTMDPAQATITAEQLEGQQLKH
>NZ_CP048429.1|WP_062519020.1|910179_911055_-|hypothetical-protein
MELSNLTLFSGETFDESVLGAVALHQTGNTPFQSALLHDFDMVVLMLHEEQEKERIITHTMAGERRTQSVHVSLSALERAVMAGDNNELLTSLIAGEVIWDPQGILGEMRREIIQFQGPIKERILFMEFSRFLHMYVKSKRYMEAGCTMDAYNCVLIALYHWARIEVSEAGCFPDPAVWEQIKGLNSSVHKLYEELTVSTETLDQRVELILLACEFSIMSKMSDCCTILLNILGSRKEPWSIKELLQHSGLSQLGAELPLVLRKLVSRSQIREIASWAEDAGDGHAVRYTL
>NZ_CP048429.1|WP_062521837.1|902142_902829_-|response-regulator-transcription-factor
MNKILLLEDDLSLIDGLSYSLNKQGFELDIARTVREAEVLFTDGIYDLLILDVSLPDGSGFEVCRKVRQVSKVPIVFLTASDEEVNMVMGLDMGGDDYITKPFKLGVLVSRINAVLRRANDFGVADAEMASNGIKVLLLQGEAYKDEKVLPLTTAEYRLLCLLMNHPNQVLSKEMILDKLWDGPGSYVDDNTLAVYIRRLRMKIEEDPNHPQILLTVRGMGYKWKVTN
>NZ_CP048429.1|WP_062519007.1|920938_921322_-|hypothetical-protein
MLRLGEKIVIVADAFEQGLPIGDYGYLIAYDRNPDNAFDYVIRVPQANRNFYVTAEDVETEEQLLAAQAESATHEALIDYALSTHNEKLFHHLMNGDDVEAVETETTTKESQSQADFIKQVNLRAWI
>NZ_CP048429.1|WP_062519006.1|921479_922250_-|ABC-transporter-permease-subunit
MRNMWTLYHKEMLESLRSYKLIWVPVVFIILGIMQPLTTYYMPEILKASGNVPPGMLEGYEMPGSAVVMAQALGQYGTIGMLILVLGVMNSLAGERSSGTVEMLMAKPVAPAAIVSAKWAAQLTVLVMALGLGAAGAAYYTEQLMGPLSWSNLAAAAGLYGLWLLCAVSLTLLFSAWLRGPAAAFLGLLAAAAMSLAHSLLPSQLGWTPASLTAMSAEMMTEGGGFAWGPVLFAGILIVACVAAASLLIRRNQLPE
>NZ_CP048429.1|WP_062519004.1|922246_923158_-|ABC-transporter-ATP-binding-protein
MPLLTVANLRKVYGGHTPVDGISFEIEAGKCVALLGPNGAGKTTTLRMLAGLLKPTSGQISFDGSPGGDYRKRIGYLPQSPAFYNWMSGQEYVVFAAKLCGISSKEAAGLAADVLEHVGLRDAGRRKIAGYSGGMKQRLGLAQALIHRPRLLLLDEPVSALDPIGRREVMELLRGIREETTVIFSTHVLHDAEEICDDIILMNQGLIAEHGALSRLRSQYSIPVIRLTTEREEKAQRWLEDLAHRSFVEQSEVSSGSATLNVKNVELARQIILQEAGSLDIPLLQFEAGSSTLEDLFMKVVGA
>NZ_CP048429.1|WP_062519002.1|923157_923349_-|transcriptional-regulator
MDEIKWGLIGPLLALQALLAVIGLISLGKAERTRGPKWLWVIILIFGNLLGSVAYFTVGRKDN
>NZ_CP048429.1|WP_062519000.1|923398_923620_-|hypothetical-protein
MKELQDVPYWLWGCLAVTLLLQGTLIFHNAQKRGRGKLAWFWGIWGLTGIPTPLICYLLFVVLPDRKRANRKL
>NZ_CP048429.1|WP_062518998.1|923616_923943_-|YxlC-family-protein
MNTKKDEELLQMLSADLERLDAQYDDISPPALPGLERLIAEEALRRQQQSRRELQRFLLVALFMVSIVMISLGFAPVTYWILQAAVPIAALGCLAVVRLRLRREDAEE
>NZ_CP048429.1|WP_082722500.1|923923_924466_-|RNA-polymerase-sigma-factor-SigY
MSDGTHERIIRAQQGDASALAVLLQEHYVFLYKYLVKATMDPLLAEELAQDTMVRCMEKIGTYNGASSFSSWLITIATRLYIDRKRRWKLEMKWKRQEEGVRSIRWRFESRNLEWSEVLDALSRLSSVQRMAVLLKHYYGYGYEEIADILQIPSGTAKSRVAAGLNQLRKELSEDEHKEG
>NZ_CP048429.1|WP_157243729.1|924524_924701_-|hypothetical-protein
MKDTEEEVHEEEAHQAPASITNEQDKKECLFWSFPHGKGAIQPWRRRLWELQNNSDRE
>NZ_CP048429.1|WP_062518995.1|924889_925519_-|MBL-fold-metallo-hydrolase
MLNIRSYNLGPLQTNAYLLTGADPGRGVIIDPGANPSALLRAVEGMEIEAVLLTHAHFDHIAGLDEIRRAKKCPVYLHTLESEWLGNPKLNGSLMWPDVTPPISTEPAEYDLADGQVLNLLGLTFRVMHTPGHSPGSVSFLCGSDLFSGDVLFKLGVGRTDLTGGRERDLIDSIRNKLYRLDEEVRVFPGHGPRTTIGFERQRNPYVPM
>NZ_CP048429.1|WP_062518993.1|925525_926092_-|thioredoxin-family-protein
MKQNVAHKFGQGLTPRQFVEGMTKNQQAFESWYEKFAWEDQDDRAYFESLNHRDDLRVLILAADWCGDVVRNVPVVFRILETAGIRTEVLILEENQEVMDDFLTMGGRAVPIVIFADTGGYVLGHWGPRPEHVQSLMREFKRENPDREAPDYESKIAEVRKAMGQAYGEGTESHAVIAKELRSLISGF

Crispr_ID: NZ_CP048429_6

• CRISPR_ID: NZ_CP048429_6
• CRISPR_location: 1408236-1408309
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_6

Consensus_repeat	Method
AAGTGGAAAAAGGTTAACTAATT	CRISPRCasFinder

spacers of NZ_CP048429_6

>6.1|1408259|28|NZ_CP048429|CRISPRCasFinder
TACTTGAGCTATCTGTTCTCCGCAGATG

CRISPR arrays and Neighbor proteins around NZ_CP048429_6

CRISPR arrays

The CRISPR arrays of NZ_CP048429_6

>merge|NZ_CP048429|6|1408236-1408309|CRISPRCasFinder
AAGTGGAAAAAGGTTAACTAATTTACTTGAGCTATCTGTTCTCCGCAGATGAAGTGGAAAAAGGTTAACTAATT

>NZ_CP048429|6|6|1408236-1408309|CRISPRCasFinder
AAGTGGAAAAAGGTTAACTAATT	TACTTGAGCTATCTGTTCTCCGCAGATG
AAGTGGAAAAAGGTTAACTAATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062521213.1|1401162_1402674_-|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl|CDD|236448
NZ_CP048429.1|WP_020426793.1|1419010_1420078_-|peptide-chain-release-factor-1	unknown	unknown	gnl|CDD|234801
NZ_CP048429.1|WP_062521265.1|1413942_1414701_-|stage-II-sporulation-protein-R	unknown	unknown	gnl|CDD|378205
NZ_CP048429.1|WP_062521204.1|1405021_1405399_-|ATP-synthase-subunit-I	unknown	unknown	unknown
NZ_CP048429.1|WP_082722564.1|1410061_1410715_-|TIGR01440-family-protein	unknown	unknown	gnl|CDD|377271
NZ_CP048429.1|WP_062521214.1|1400134_1401010_-|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl|CDD|235535
NZ_CP048429.1|WP_062521191.1|1416185_1417370_-|rod-shape-determining-protein-RodA	unknown	unknown	gnl|CDD|274033
NZ_CP048429.1|WP_020426089.1|1403233_1403722_-|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl|CDD|349951
NZ_CP048429.1|WP_074648509.1|1417989_1418985_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl|CDD|236467
NZ_CP048429.1|WP_062521200.1|1405840_1406995_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl|CDD|223458
NZ_CP048429.1|WP_025709067.1|1403821_1404046_-|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl|CDD|180739
NZ_CP048429.1|WP_167529885.1|1408719_1409967_-|serine-hydroxymethyltransferase	unknown	unknown	gnl|CDD|234571
NZ_CP048429.1|WP_062521206.1|1404148_1404991_-|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl|CDD|235617
NZ_CP048429.1|WP_074648499.1|1412562_1413825_-|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl|CDD|223088
NZ_CP048429.1|WP_020426095.1|1407076_1407706_-|uracil-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234653
NZ_CP048429.1|WP_062521196.1|1411036_1411624_-|low-molecular-weight-protein-arginine-phosphatase	unknown	unknown	gnl|CDD|319972
NZ_CP048429.1|WP_062521210.1|1402685_1403237_-|F0F1-ATP-synthase-subunit-delta	unknown	unknown	gnl|CDD|365949
NZ_CP048429.1|WP_062521192.1|1414792_1415959_-|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl|CDD|274033
NZ_CP048429.1|WP_143013521.1|1411676_1412249_-|manganese-efflux-pump	unknown	unknown	gnl|CDD|308338
NZ_CP048429.1|WP_062521202.1|1405391_1405646_-|AtpZ/AtpI-family-protein	unknown	unknown	gnl|CDD|378198

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062521213.1|1401162_1402674_-|F0F1-ATP-synthase-subunit-alpha	gnl|CDD|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NZ_CP048429.1|WP_020426793.1|1419010_1420078_-|peptide-chain-release-factor-1	gnl|CDD|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP048429.1|WP_062521265.1|1413942_1414701_-|stage-II-sporulation-protein-R	gnl|CDD|378205	pfam09551, Spore_II_R, Stage II sporulation protein R (spore_II_R). SpoIIR is designated stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. SpoIIR is a signalling protein that links the activation of sigma E to the transcriptional activity of sigma F during sporulation.	3.92842e-69
NZ_CP048429.1|WP_082722564.1|1410061_1410715_-|TIGR01440-family-protein	gnl|CDD|377271	pfam04260, DUF436, Protein of unknown function (DUF436). Family of bacterial proteins with undetermined function.	5.98473e-96
NZ_CP048429.1|WP_062521214.1|1400134_1401010_-|F0F1-ATP-synthase-subunit-gamma	gnl|CDD|235535	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated.	3.46767e-155
NZ_CP048429.1|WP_062521191.1|1416185_1417370_-|rod-shape-determining-protein-RodA	gnl|CDD|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	4.00506e-94
NZ_CP048429.1|WP_020426089.1|1403233_1403722_-|F0F1-ATP-synthase-subunit-B	gnl|CDD|349951	cd06503, ATP-synt_Fo_b, F-type ATP synthase, membrane subunit b. Membrane subunit b is a component of the Fo complex of FoF1-ATP synthase. The F-type ATP synthases (FoF1-ATPase) consist of two structural domains: the F1 (assembly factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha (or A), beta (B), gamma (C), delta (D) and epsilon (E) subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons through the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Candidatus Methanoperedens.	5.31899e-30
NZ_CP048429.1|WP_074648509.1|1417989_1418985_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl|CDD|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	1.40049e-104
NZ_CP048429.1|WP_062521200.1|1405840_1406995_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl|CDD|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	1.46338e-177
NZ_CP048429.1|WP_025709067.1|1403821_1404046_-|F0F1-ATP-synthase-subunit-C	gnl|CDD|180739	PRK06876, PRK06876, F0F1 ATP synthase subunit C; Validated.	1.97784e-20
NZ_CP048429.1|WP_167529885.1|1408719_1409967_-|serine-hydroxymethyltransferase	gnl|CDD|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP048429.1|WP_062521206.1|1404148_1404991_-|F0F1-ATP-synthase-subunit-A	gnl|CDD|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	5.77323e-59
NZ_CP048429.1|WP_074648499.1|1412562_1413825_-|threonylcarbamoyl-AMP-synthase	gnl|CDD|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	3.31643e-78
NZ_CP048429.1|WP_020426095.1|1407076_1407706_-|uracil-phosphoribosyltransferase	gnl|CDD|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	1.65152e-131
NZ_CP048429.1|WP_062521196.1|1411036_1411624_-|low-molecular-weight-protein-arginine-phosphatase	gnl|CDD|319972	cd16344, LMWPAP, low molecular weight protein arginine phosphatase. Low molecular weight protein arginine phosphatases are part of the low molecular weight phosphatase (LMWP) family. They share a highly conserved active site motif (V/I)CXGNTCRS. It has been shown that the conserved threonine, which in many LMWPTPs is an isoleucine, confers specificity to phosphoarginine over phosphotyrosine.	3.48919e-62
NZ_CP048429.1|WP_062521210.1|1402685_1403237_-|F0F1-ATP-synthase-subunit-delta	gnl|CDD|365949	pfam00213, OSCP, ATP synthase delta (OSCP) subunit. The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.	1.14333e-53
NZ_CP048429.1|WP_062521192.1|1414792_1415959_-|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl|CDD|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	2.01111e-92
NZ_CP048429.1|WP_143013521.1|1411676_1412249_-|manganese-efflux-pump	gnl|CDD|308338	pfam02659, Mntp, Putative manganese efflux pump. MntP is a family of bacterial proteins with a signal peptide and four transmembrane domains. It is a putative manganese efflux pump, since deletion of the gene leads to profound manganese sensitivity and elevated intracellular manganese levels in bacteria. Manganese is a highly important trace nutrient for organisms from bacteria to humans, and acts as an important element in the defense against oxidative stress and as an enzyme cofactor.	1.13029e-35
NZ_CP048429.1|WP_062521202.1|1405391_1405646_-|AtpZ/AtpI-family-protein	gnl|CDD|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	6.16911e-07

Protein sequences

>NZ_CP048429.1|WP_020426095.1|1407076_1407706_-|uracil-phosphoribosyltransferase
MGKLVICDHPLIQHKLTFIRDVRTNTKEFREHVDEVATLMAYEITRDIPLETITVQTPVAETQSKVISGRMLGLIPILRAGLGMLEGVLKLLPAAKVGHVGLFRDPETLQPVEYYIKLPTDVQERELIVIDPMLATGGSAIAAITSLKNRGCTQIKMMNLIAAPEGVAAVQAAHPDVDIYVAALDDHLNEHGYIVPGLGDAGDRLYGTK
>NZ_CP048429.1|WP_062521200.1|1405840_1406995_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MSKIKVMTIFGVRPEAIKMAPLVLELAKHPEHIESVVCVTAQHRELLDQVLEVFKITPDYDLDVMKDRQTLNEITIRVLEGLEPVLREAKPDLVLVHGDTLTTFLASYASFLQQIQVGHVEAGLRTWNKLSPYPEEMNRQLTGVLADLHFSPTDWSAGNLRHENKKESSIYITGNTVTDVFQYTVQPDYRHPVLDFASGKRLILMTAHRRESQGEPHRHIFRAVKRIADEFEDVAIVYPVHPSPAVKEPAHEILGGHPRIKLIDPLDVVDLHNFYPHTHLILTDSGGLQEEAPSFGVPVLVLRDTTERPEGIEAGTLELVGTDEEKVYQRTHALLTDQELYQSMSRAANPYGDGKASERIVNAILHHFGVVQDRPEEFHRMFTK
>NZ_CP048429.1|WP_062521202.1|1405391_1405646_-|AtpZ/AtpI-family-protein
MKGPNKPAEPHKQTGHALKAVSLVSAVGINLAAFTLGGYFLGAWLDDKWNSSGLGVALGVIVGVLCGVTGVIFIIKAVMEESDG
>NZ_CP048429.1|WP_062521204.1|1405021_1405399_-|ATP-synthase-subunit-I
MDDLSRYRKVLALATLCFVVLCVLAAGIFPDFRSVGFGMALGGAIGCINVTYLGYKVRQVADTMAGEGKRRVSLGYLTRAALSLLGVMVAFKAPQVFNMIAVAGSLLLAPILLIIIGIGFSRRES
>NZ_CP048429.1|WP_062521206.1|1404148_1404991_-|F0F1-ATP-synthase-subunit-A
MHKSPIIMLGGLHIDLSIVLMLLVTCTIVFVLALLATRNLSVENPGKLQNFLEWAVEFVQGLISSTMDLKKGKPFLSLGMALIMFLFVGNLLGLPLGIVTDYHDAEHAKVFGKEIVSVTKELDKLHADAEAGTVNSDSHEEPEVGVAWWKSPTADPAVAMGLAVMIFLMTHIVGMTRNTKNYFKHYFEPYPFFFPINLIEQVSKLLTHGMRLFGNIFAGEVLISVILKLAALGVGGWIASVLGLIVWQGFSIFIGTIQAFIFVMLTMVYFSQMLETHDEH
>NZ_CP048429.1|WP_025709067.1|1403821_1404046_-|F0F1-ATP-synthase-subunit-C
MGVMAYLAAAIAVGLGALGAGIGNGLIVSKTVEGIARQPEAKSTLQTTMFIGVALVEALPIIGVVLAFMFYVGA
>NZ_CP048429.1|WP_020426089.1|1403233_1403722_-|F0F1-ATP-synthase-subunit-B
MSFVWESSVLAIIAFGILYFLLNKYAFGPLFSVMEKRRELVLQQMNEAAQTREQAVSYVEEQKQALQTARKEALEIIEQSRQTSSKQTEQLIDQAKVEASRIKEEAVRDIQNEKNKAVEELRGELGAASVKIASKLLQKEVSSDPEQEALVDQYLKEVGGRS
>NZ_CP048429.1|WP_062521210.1|1402685_1403237_-|F0F1-ATP-synthase-subunit-delta
MSQDTIVAKRYAKALFEVAFEERQIMEVEEDLKSLVAALNSDVELQRFISSPRITGEHKLAVLKKALEGKLSGAVINTLEILMKRGRMDILPDLLDSYIKIEGDSLGLADATVYSTYSLSSSEQTQVAEEFGRLSGRNIRITNVVDKSLLGGLKVIIGDTLYDGSLSGKLTRLEKSFNDKHRR
>NZ_CP048429.1|WP_062521213.1|1401162_1402674_-|F0F1-ATP-synthase-subunit-alpha
MSIRPEEISSLIKSQIEQYKADIEVAEIGTVIQVGDGIARVYGLENAMAGELLEFSNGVVGMALNLEESNVGVVILGEYTEIREGDQVKRTGQIMQVPVGEAMLGRVVNALGQPLDGKGPIATTEFRPVENNAPGVIDRKSVHEPMQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAIAIDAIINQKGNGMKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPSPLLYIAPYAGCAMGEYFMYKGEHVLVIYDDLSKQASAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDELGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLESDLFNSGQRPAINVGISVSRVGGSAQIKAMKKVAGSLRLDLAQYRELQAFSQFGSDLDKSTQARLNRGARMMEILKQGVNQPLSVEHQVISLYTAVKGHLDDIPVKDVKRFEKEFLAYMDSNAAAVAKSITDTKDLTADNEAALKEAIEKFKRGFATS
>NZ_CP048429.1|WP_062521214.1|1400134_1401010_-|F0F1-ATP-synthase-subunit-gamma
MARSMRDIKRQIKSVQNTRQITKAMEMVAASKLRKAQEKAEAARPYSEKLKEVVASIAAGSQGATHPMLVSRPVKKTAYLIVTSDRGLAGGYNANILRKVTMLLAERHKSKDEYALFVIGRKGRDFLRRREYPIVEEITELSDTPKFADIKSIAYSAVQQFETGVYDELYLCYNRFVNAISQVPTVERLLPMEPVENQEKKAEGLHAAYEYEPSPEGVLEVLLPKYAETLIYSAILDGKASELGAKMTAMGSATKNASKMIGNLTLTYNRARQAAITQEITEIVAGANAQS
>NZ_CP048429.1|WP_167529885.1|1408719_1409967_-|serine-hydroxymethyltransferase
MEQLRKSDPAVLEAMGLELSRQRANIELIASENIVSEAVMEAMGSVLTNKYAEGYPGKRYYGGCEDVDIVENLARDRAKQLFGADHANVQPHSGAQANMAVYLAALNPGDTVLGMNLAHGGHLTHGSPVNASGLLYNFVAYGVQEDTFLIDYDEVRKAAFKHRPKLIVAGASAYPRTIDFEALGSIANDVGALFMVDMAHIAGLVAAGLHPSPVPHAHFVTTTTHKTLRGPRGGMILCRQPWAAAIDKAVFPGSQGGPLMHVIASKAVSFGEALQPSFKTYAENVVKNAKVLAETLIGEGVNIVSGGTDNHLMLLDTRNLNITGKDAEKVLDSIGITVNKNAIPFDPTSPFVTSGIRIGTPAVTSRGMNEQAMVTIGRIIASVLKNPKDEAKLAEAAREVAALTEQYPIYPGLQY
>NZ_CP048429.1|WP_082722564.1|1410061_1410715_-|TIGR01440-family-protein
MDHVMKQDSRVNPANSNAAGDAGQPAAAELSLTAATAAVVRELSDTGKLGPGKILVVGASTSEVAGVHIGTGGALEVAQQLLEGIVQVAEERGFDPVYQCCEHLNRSLVMERSLLEKLGLREVSAVPIPGAGGSMAAAAYRSMADPVLAETVEAHAGIDIGETLIGMHLRRVAVPFRPSLRYIGSARVNAAWSRPPLIGGERAVYRNPETSGSRSCD
>NZ_CP048429.1|WP_062521196.1|1411036_1411624_-|low-molecular-weight-protein-arginine-phosphatase
MLHILFVCTGNTCRSPMAEGLLRKLAKERGIDVEVRSAGVSAISGTSMSRHAAAILRDEGIHDHILSTQLNAETVAWADLVLTLTGGHKRHLLQYFPEAVAKTYTLKEYVYDEEAVNADIRELDSLYADAELSLALGAEPKSADLQRIIEIRQRIPSFDISDPFGGPREDYELAAAEIRTALYSLLDKLESLRRL
>NZ_CP048429.1|WP_143013521.1|1411676_1412249_-|manganese-efflux-pump
MDMGGVYAGWGQIVTIAIMAIALGMDAFSLGVGIGMKGIRLLHVLQLSLLIAFFHVLMPLLGLFTGSYVGHLLGQVTTYAAGGLLVLLGGHMVFNSFRADHSRRDPVNHRTFWGMLLISLSVSVDSFSVGVSLGMFVNSIALTVLAFGACGGLMSISGLLLGRRVSRGLGDYGEALGGSILLAFGLLFIF
>NZ_CP048429.1|WP_074648499.1|1412562_1413825_-|threonylcarbamoyl-AMP-synthase
MTKPQDSSFAVQRRSGQIDSTRYWKLSPAEEPGADSALYPQSEGDRQAIAEAAALLREGSTVAFPTETVYGLGADATSTAAVEAVFAAKGRPSDNPLIVHIARRSDLDGLVTEVHPSAAALIDAFWPGPLTVVLPVRPGVLSPLVTAGLDTVGVRMPDHPLALALIRAADCPVAAPSANRSGRPSPTLAAHVLEDLAGYIGGVLDGGAAGVGLESTVVQVQPDGTAAVLRPGGITAEQLAAVLGPGAVAAAPATAVDYAAGPGGASTAPAEAPAAASAQPPGAAQAAGDSSPAPRAPGMKYTHYAPRGALGVVRGASARRVAEAAAGLLQAAQRAGEITGLLLFEEHKALYPAGAAACVVSLGSLASPEEGARSLYAALRRFDEAGATYILAEACPDTGLGAAIMNRLMKAAGGTVIDAD
>NZ_CP048429.1|WP_062521265.1|1413942_1414701_-|stage-II-sporulation-protein-R
MEWSKTGKQDSLRVTFKYTAILICFFMILMMAWEGQKTDAAVADALIPQDSIRLRILANSDAAGDQLVKRQIRDRIVEQMNQWVALLEDPQSLEQARKLIRSHLPELNALVAGELKERGIDYGYTVELGVVPFPTKMYGGTVYPAGEYEAVRVTLGAGQGQNWWCVLFPPLCFIDAGSGDAAAPAAAKARTVSAAAAGEGAKVNGAAKGAVTTASDSSKADVASGEAETPKVRFFFLELLQNIWSWISGLFR
>NZ_CP048429.1|WP_062521192.1|1414792_1415959_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MLQRFKKIDGVIVVVLLMLMAISILSIYSVTHGRKDDGLHIQMIKWYGVGFVAFFGLSLFDYRLLVKYAHYIYILGVGILVVVSFVGKVKNGARGWLEIGGLSLQPAELFKLILILALAALLVRKNKGELLFWRDVVPLSLVALLPFAVVIIQNDLGNALSYMVILVGLLWIGRIKWSHALIGLIIFGGAIFGFIYSYINYHEQMTNFLSETIGRKHFVARFDPWLVPELASSDDSYQTRNAKIAIASGGLSGEGYMKGGSVQSGKIPVLYTDAIFAQIAEEFGFVGAALLLLLFFILIHRMIMIALECRERAGPFLIIGMVAMLLYQIFENIGAYIGLMPLTGITLPFISYGGTSIVINMASMGIAMSVLLYGQDVEENLPAPAVYF
>NZ_CP048429.1|WP_062521191.1|1416185_1417370_-|rod-shape-determining-protein-RodA
MLQKIKKIDGVIVIILVLLMVVSIFSIYSVTHGRDKLDGAHLRMIKFYVLGIIAFFGLTFVDYRLLVKYALYIYVTGIGILVLVSFIGKEQNGAQGWIKFGGFSLQPAELFKLILILFLAAVLVRKHKNKLMFWQDVVPLGLLTLLPFLIVISQNDLGNALSYIVILVGLLWIGNIKFTHALIGLLVIGGVAAGGITSYIHYHDEIKDFLTDIGRSHWVERFDPWLVPDEATAKASYHTKNAKLAIASGGMSGEGYMEGSSVQTDRVPYTYSDSIFVQIAEEFGFVGSALVLLLYFILIHRMILIALESKDRGGPFLIVGIVAMMLYQIFENIGAFIGLMPLTGITLPFISYGGTSLMINMASIGLVMSVRLHGQEVEEDLPSPSVYTSPAKQG
>NZ_CP048429.1|WP_074648509.1|1417989_1418985_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MPDVQSIREAFAEASSFLDKSGCNEPQRSSQLLLEHVLGLSGAAYYMALADPFPPAARAAWEAGVTRRAAGEPVQYIIGEQEFYGRVFEVTPDVLIPRPETELLVEAVLKYGAELWPDGLAAPLGGAAREGGCAASGAAQRRDEAGGMAARRMNGAADTRAPRPLTAVDIGAGSGAISVTLAAEAPAWRVCAGDISPGALAVAGRNAQRHGTAVDLRLGDLLEPFAGMETDILVSNPPYIPGGDIAGLQREVRDHEPRTALDGGDDGLDPYRRMMEQLPLLPAPPRLVGFELGQGQAEQVAELLRAAGHWSEIVTIDDLAGIPRHVLGIAR
>NZ_CP048429.1|WP_020426793.1|1419010_1420078_-|peptide-chain-release-factor-1
MLDRLQSLADRYEKLSELLCDPDVASDSKKLRDYSKEQSDLQPAFEAYAEYKNVMEELEAAKMMQGEKLDDEMKEMVKMEIEDLSSRQTALEEKIRLLLLPKDPNDDKNVIVEIRGAAGGDEAALFASDLYRMYTRYADAQGWRVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVSVMPEAEEFEIEILDKDIRVDTFCSSGAGGQSVNTTKSAVRVTHVPTGIVATCQDGKSQNSNKEKALQVLRARISDMKRQEEEAKYAGERKSKVGTGDRSERIRTYNFPQSRVTDHRIGLTLHRLDQVMNGDITEIISALSIAEQAELMEKGE

Crispr_ID: NZ_CP048429_7

• CRISPR_ID: NZ_CP048429_7
• CRISPR_location: 1446862-1446936
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_7

Consensus_repeat	Method
CAAGTGGAAAAAGGTTAACTAAT	CRISPRCasFinder

spacers of NZ_CP048429_7

>7.1|1446885|29|NZ_CP048429|CRISPRCasFinder
GGCTCGGGCAACATCCGTACCCCACCGGC

CRISPR arrays and Neighbor proteins around NZ_CP048429_7

CRISPR arrays

The CRISPR arrays of NZ_CP048429_7

>merge|NZ_CP048429|7|1446862-1446936|CRISPRCasFinder
CAAGTGGAAAAAGGTTAACTAATGGCTCGGGCAACATCCGTACCCCACCGGCCAAGTGGAAAAAGGTTAACTAAT

>NZ_CP048429|7|7|1446862-1446936|CRISPRCasFinder
CAAGTGGAAAAAGGTTAACTAAT	GGCTCGGGCAACATCCGTACCCCACCGGC
CAAGTGGAAAAAGGTTAACTAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062521178.1|1434502_1435813_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NZ_CP048429.1|WP_143013524.1|1439025_1440540_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|224089
NZ_CP048429.1|WP_062521164.1|1446018_1446684_-|molybdenum-cofactor-guanylyltransferase	unknown	unknown	gnl|CDD|133000
NZ_CP048429.1|WP_163704297.1|1449091_1450120_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_143013519.1|1447630_1448905_+|MFS-transporter	unknown	unknown	gnl|CDD|340893
NZ_CP048429.1|WP_062521259.1|1436472_1437810_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NZ_CP048429.1|WP_062522548.1|1452283_1452832_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NZ_CP048429.1|WP_062522549.1|1453914_1454559_-|MOSC-domain-containing-protein	unknown	unknown	gnl|CDD|225167
NZ_CP048429.1|WP_062522544.1|1450079_1451780_-|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	unknown	unknown	gnl|CDD|235424
NZ_CP048429.1|WP_062521176.1|1438043_1438661_-|amino-acid-transporter	unknown	unknown	gnl|CDD|224198
NZ_CP048429.1|WP_062522550.1|1454539_1455070_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_CP048429.1|WP_062521162.1|1447244_1447478_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062521167.1|1443453_1444131_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP048429.1|WP_062521166.1|1444060_1445926_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP048429.1|WP_062521169.1|1442391_1443453_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|274368
NZ_CP048429.1|WP_062522552.1|1455146_1456358_-|MFS-transporter	unknown	unknown	gnl|CDD|340887
NZ_CP048429.1|WP_062522546.1|1452010_1452256_+|DUF2164-domain-containing-protein	unknown	unknown	gnl|CDD|378315
NZ_CP048429.1|WP_062521172.1|1441017_1441623_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380062
NZ_CP048429.1|WP_062521171.1|1441651_1442395_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187620
NZ_CP048429.1|WP_082722622.1|1456476_1458582_-|molybdopterin-oxidoreductase-family-protein	unknown	unknown	gnl|CDD|239167

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062521178.1|1434502_1435813_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.00133879
NZ_CP048429.1|WP_143013524.1|1439025_1440540_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	8.11953e-121
NZ_CP048429.1|WP_062521164.1|1446018_1446684_-|molybdenum-cofactor-guanylyltransferase	gnl|CDD|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	2.73482e-57
NZ_CP048429.1|WP_062522548.1|1452283_1452832_+|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.496e-30
NZ_CP048429.1|WP_143013519.1|1447630_1448905_+|MFS-transporter	gnl|CDD|340893	cd17335, MFS_MFSD6, Major facilitator superfamily domain-containing protein 6. Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.28897e-54
NZ_CP048429.1|WP_062521259.1|1436472_1437810_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.00898757
NZ_CP048429.1|WP_062522549.1|1453914_1454559_-|MOSC-domain-containing-protein	gnl|CDD|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	2.62171e-68
NZ_CP048429.1|WP_062522544.1|1450079_1451780_-|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	gnl|CDD|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
NZ_CP048429.1|WP_062521176.1|1438043_1438661_-|amino-acid-transporter	gnl|CDD|224198	COG1279, COG1279, Lysine efflux permease [General function prediction only].	2.41316e-60
NZ_CP048429.1|WP_062522550.1|1454539_1455070_-|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.01882e-19
NZ_CP048429.1|WP_062521167.1|1443453_1444131_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.59499e-80
NZ_CP048429.1|WP_062521166.1|1444060_1445926_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.23618e-174
NZ_CP048429.1|WP_062521169.1|1442391_1443453_-|sensor-histidine-kinase	gnl|CDD|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	6.45286e-66
NZ_CP048429.1|WP_062522552.1|1455146_1456358_-|MFS-transporter	gnl|CDD|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.15157e-39
NZ_CP048429.1|WP_062522546.1|1452010_1452256_+|DUF2164-domain-containing-protein	gnl|CDD|378315	pfam09932, DUF2164, Uncharacterized conserved protein (DUF2164). This domain, found in various hypothetical prokaryotic proteins, has no known function.	2.70953e-24
NZ_CP048429.1|WP_062521172.1|1441017_1441623_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|380062	pfam17935, TetR_C_27, Tetracyclin repressor-like, C-terminal domain. This is the C-terminal domain present in putative TetR transcriptional regulators.	1.03305e-20
NZ_CP048429.1|WP_062521171.1|1441651_1442395_+|SDR-family-oxidoreductase	gnl|CDD|187620	cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs. 1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	4.87591e-116
NZ_CP048429.1|WP_082722622.1|1456476_1458582_-|molybdopterin-oxidoreductase-family-protein	gnl|CDD|239167	cd02766, MopB_3, The MopB_3 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0

Protein sequences

>NZ_CP048429.1|WP_062521164.1|1446018_1446684_-|molybdenum-cofactor-guanylyltransferase
MPQFTGILLSGGYSRRMGRDKALLDLEGRPVIARLADELSKVAAGPVIACGEQEREEYRFLGLPQVPDLYPGCGPLAGLHAALHQSPTEWSVVAACDLPFASAEFMRYMMSAVAGPSRDLTPDYTGGGLQIDAAVPESVTGRVQPLLGLYHKRVLPVLEQALHGRRFKVMECLDALEVLYIPEACFTGGPSGPSPLYNMNTPEDYAAAVKLVSTPADDSSV
>NZ_CP048429.1|WP_062521166.1|1444060_1445926_-|ABC-transporter-ATP-binding-protein
MNNNQSGKKQGASLKSFLKLLHGTKPSYGLLAFAVALSVISTLVGLVIPMFTKNLVDGFSLASVSKLQIAGIAGAFIAQTIAGGVSIYLLNYVGQKAVAGLRDRLWRKFLVLPVAYYNDNRTGESVSRMTNDTGIIKTLISEHLASLFTGVISIVGSIAVLLYLNWQMTLVLFTVLPLSALILVPLGRQMYKISKGTQDETASFTATLSGVLSEIRLVKSSGAEQKEYEAGRTGIMNLLSFGIREGKISAMISPLVSFVFMMLLVVVIGYGGMQVSSGALTAGELVAFILYLIQIVMPLTQLTQFFTQMQKAKGASERIIETLAADEEIYEGVEEAKGAEEPIVIDNLSFGYTIGDPVLSGVSFSMLPGQVTAIVGPSGGGKTTLFSLLERFYEPQSGVIKLGAKPISNFSLRSWRKQIGYVSQESPLLSGTIADNLAYGLNREVGVDELRRAAAMAYADGFISELPHGYDTDVGERGVKLSGGQRQRIAIARALLRDPKILMLDEATASLDSQSEAVVQKALSNLMKGRTTIVIAHRLATVVNADQIIFMEKGRITGRGTHAELLREHELYREFAEQQLQLNIPVLPDGGEKEGSAKNGQNPGSGRRSAHPRIGGSLFES
>NZ_CP048429.1|WP_062521167.1|1443453_1444131_-|response-regulator-transcription-factor
MAKILVVDDDPHIRELVEVFLRAEGMEEVYGASDGIEALRLLEDNGVDLAVIDVMMPNMDGWELCKALRRSYDIPILMLTAKGETSQIVKGFELGTDDYLVKPFEPPVLIARVKALLKRYQISAAQSVNVGNLRMNRKTYEVTADQGSITLPLKEFELLFKLASYPGQTLTRDRLIEEIWGYDFEGNERTLDVHVGRLRDRFPAEDYGFAIRTVRGLGYRLEGDK
>NZ_CP048429.1|WP_062521169.1|1442391_1443453_-|sensor-histidine-kinase
MSRSRAGEIVRAVMGIIMIIAGFYLSWNGGYFGLKLLEKHFNWSLTPYRFQLLTMVLQFLILMLLAGIAGLIGRLRGDERAFYIPIITAIRQISKGNFKVELENDRRYGQFGSIVEGINEMASELSRMETMRQDFISNVSHEIQSPLTSIRGFARALRDEGLSAESRAHYLDIIEAEGSRLSGLSDNLLKLSALEAESFPFERTAYRLDKQLQEMILACEPQWLGKNIDVEAELDEVTVQAVKDLLSQVWTNLLHNSIKFTPQGGMITVRLRPLDNRVEVEIKDNGIGIAEDELPRIFERFYKVDKARSTSGGGSGLGLSLVKKIVDIHDGSITITSRPGEGTACVVVLPMQS
>NZ_CP048429.1|WP_062521171.1|1441651_1442395_+|SDR-family-oxidoreductase
MSQSLQGKVAIVTGSSRGIGRSVAERLAQEGASVVINYSSSPKQAEEVVQGIQAQGGTAAALQADISKPAQIEQLYKDTKALFGKIDIVVNNAGIMINSLIGEATEEQFDKQFAINVKGTYFSCQQAFFHLEQGGRIINFSTSVNGQMFPAYSIYAGTKGAVEQFTRQLAKEFGSKGITINAVAPGPVATDLFLEGKSEAQLEGLKKSNAFGRLGQPEDIAGVVSFLAAEQSGWITGQTLRVNGGFI
>NZ_CP048429.1|WP_062521172.1|1441017_1441623_+|TetR/AcrR-family-transcriptional-regulator
MSKSSSFLSKTEIMDAAEQTLRRFGPDKTSVTDVAKLLGVSHGTLYRHFPSKAALREAVTERWLEEQIVAPLEQIVKAPADNALAQLKVYIARLIELKLHYAEQDSEMFKMYTDVTMEAAELIEVHIQRIMEQMGILIDRGIQQKRIAQSAATSSLARSLFHATSRFHHPAHAHEWRSASIEQEFEQVWQLLEQGLTASIH
>NZ_CP048429.1|WP_143013524.1|1439025_1440540_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MDKIRSGAWPPGMRLAPQRELCRQLGVNRSTVVTALGELAALGLIEGRRGGGTRVADLRSTADGAVSPGDRASASERTASSGDGAALAGDRAPSSSDGAGMDILPIQPAGSWNSYVEEGVHYPNLPTVQDINRLEYEQGLIRLGTGEPSPGLLPGEAMTRMLAELSRKTLPPLSYEEPLGSPGLRSAVSSELAKNGIQADPDSILITSGALQGLQLIAVGLLPRGSTILLEKPSYLYSIHAFQSAGVKFSGLPMDEHGLLTDRLAREARRTKAAMLYSIPSFHNPTGILMDAQRRQKLMDVTGGLGLPILEDGAYQELWLDTPPPLPLKALDREGRVLHLGTLSKSASPGLRIGWIVGPEPVVRRLADIKMQTDYGASSLSQLAAARWLEGGYHEEHLQRLRAKLRVRRDAALALLERHFAGLAAWNVPAGGFYIWLALDKPVPLRTLFRAAHKAGLLLNTGDLYDRGDSRHLRLSYVYASPTELETGLPILAGLIRKLRQPGS
>NZ_CP048429.1|WP_062521176.1|1438043_1438661_-|amino-acid-transporter
MLEAIVHGILLAFGLILPLGVQNIFVFNQGALQPRFRRVVPVVLTAAVCDTLLIAAAVGGISLVLLSVEWVTPIVYGAGILFLCIMGWKIWNAAPGEGDGEVRVLSLKGQVGYALSVSLLNPHALLDTVGVIGTNSLQYTGAERWAFAAAAAGVSWMWFVSLAAAGRVLGRLDSSGRVIRLLNTVSALLIWAIAVYMGVQLWRSF
>NZ_CP048429.1|WP_062521259.1|1436472_1437810_-|helix-turn-helix-transcriptional-regulator
MSINQFADRCGINSGTLSRIVKGNQPIAMSHLELMTKGMGEVEDHFFSLYVDECFYYSAPTWRRLRPFMIRCAELGRMDCIERMVQILLDNLNNVPTLFEVAEGLFGQGQWQAAALLYKNVSASEKYQYSERLAVCQYRLFRIALGDDQSENLRAATLFEPYVPRLDEADQLDALKHLMNVYYSLQQWGKMEELAQELLRLAKIRYDLQYNSEGRFKEEKKPEKPLCLYILYAHLMRSIVYEECGDYNSALDLVPIYTDGSWIQEENEEVKRTLAQFQEWGRANTYLYRLLSGQLEVLPDYVDYISTRKGEIFTALFNVIKSANRYSWNVDHILERFSAYIPYRVHQTEFGEYSQQVIANQYASFLAELAEYYLHSQRKEGIYYILHSLKYSTKINNEAIVIRCVDLFERYRHIAAEAEKAQYKLLIREVQNLYGKKNHIAVSFM
>NZ_CP048429.1|WP_062521178.1|1434502_1435813_-|helix-turn-helix-transcriptional-regulator
MEHSVTIRDEIWAYFAQEDLSINRFAALSGIHSGTLSRIMKGRQAMAMSHLERITQTMGLAEDYFYSKYVNECLYDSAPTWRRLRPFILRSAQLKRLDCIEQLVNSLLDNLVYAPLLFDLAEELFQQDKHQAAAIIYKNVAASEKYQHSERLALCQYRLFVMALGDDPQQNLIEATLFEYYVNRLDEAHQLDAIKKLVHVYYSLHHWEKAEELTQELHRLASIQYNLRSRANHKHNNTTALERPLYFYILYAQLMRSCTYEERGDYKTALEIVPLYTDGSWIQEEGEEVNRIVAQFKEWGTANTYLNRLMDGQKEVLDEYVDFVSKRENEIFTALYKIVETANRYHWDVDHILKRFSSYIPYRRYSGIFTKRDKHVTDDHHARFRSELATYYLARRRFGAKEIAMRSVDLSAEVDHDRNVIKGTISVDFEINIAST
>NZ_CP048429.1|WP_062521162.1|1447244_1447478_-|hypothetical-protein
MCRSGFGFAANRHRTQKGSSAAFLCHWRIAALPLSASMAEQAGSSKIRVPVSGTVGSDAWVASRSGCRMTAFPPNIE
>NZ_CP048429.1|WP_143013519.1|1447630_1448905_+|MFS-transporter
MNNVRHLAGKECPILRENLDKQFSFTSLKWFNFFLYGTVVLFSSFFPLYLQEVGMNKLEIGSLMSVGALVSIIANPFWGIWTDRYQNIRRIVLLMLTGTLVLSQVVFQANTYEMIYVSILFFYFFQGPLFAESNTMILSYIDGTKHRFSSFRLWGSLGWAFTAILAGPVIEWAGVSVLSYLFAALLCAAMISLIVLPRLDHSIGIAPLPFKGFRQIFYHPFFLSFIFFGILVSIPNTMNNTFVSLYITELGGSKTMIGLAVFLSSILEVAVLVLCDRYLKRSIPVLLGWLALVSALFVLRWWLMADATTPLQVAFIQILHCVTFGGFFYVGTRLTMLLVPKPYRSSGQALYTLTWSGISGIMGGVLGGWLYQYLGAQSMYLSGVFLSLIGTLGFGAMWLLVSRGGYHPQDEHKEEDWNEIELNR
>NZ_CP048429.1|WP_163704297.1|1449091_1450120_+|hypothetical-protein
MPAAIRLIKGIFTFVSATSGLGGPIKGIFTFVSATAGLGGPIKGIFTFVSATSGLGGPIKGIFTFDFATSGLGGPIKGIFTFDFATSGLGSPIKGIFTFDFATSGLGGPIKGIFTFDFATSGLGSPIKGIFTFDLATSGLGSPIKGIFTFVSATAGLGGPIKGIFTFVSATAGLGSPFKGIFTFDSATSGLGGPIKGIFTFVSATSGLGSPFKGIFTFDSATSGLGGPIKGIFTFVSATSGLGGPIKGIFTFDLATSGLGSPIKGIFTFVSATSGLGGPIKGIFTFDFATSGLGSPIKGIFTFDSSHAKRLPTSYDDFGQPLVAYRSFSLIWQAGMSFLEKR
>NZ_CP048429.1|WP_062522544.1|1450079_1451780_-|glutamine--tRNA-ligase/YqeY-domain-fusion-protein
MENRGTPSNFIKNVITEDLSSGKVKEVVTRFPPEPNGYLHIGHAKAIWINFTLADEFGGKTHLRFDDTNPLKEDTEYVNSIQEDVKWLGYEWDELRFASDYFGEMYERAELLIQKGKAYVDDLTADQIREYRGTLTEPGVNSPYRERTTEENLDLFRRMRAGEFKDGEKVLRAKIDMSSPNINLRDPVIYRISHSHHHNTGDAWCIYPMYAFAHPLEDAIEHVTHSLCSLEFEDQRPFYDWVVAECEMPASPHQYEFGRLNLAQTVTSKRKLKLLVDEGHVDGWDDPRMPTISGLRRRGYTPEAIRSFVHETGISKSQGLVDLQMLEHFIREDLKLTVPRTMSVLRPLKVVITNYPEGQTEWFEIENNVENEAMGTRQIPFSREIYIERDDFMENPPNKYFRLFPGNEVRLKNAYFIKCTDFVKDENGEVVELHCTYDPETKSGSGFTGRKVKGTLHWVDAGQAVPAEFRLYEPLISAEEADQEAEVEGMDSAADKPEPSFLDQLNPKSIEILHGFVEPGLKGSVPQDKFQFFRHGYFNVDSRYSTPGHPVFNLIVSLKSSFQPAK
>NZ_CP048429.1|WP_062522546.1|1452010_1452256_+|DUF2164-domain-containing-protein
MKPIKLPKEQREMITENIRAYFEAERGESIGHLAADNLLEFFLQELGPAIYNGALGDCRTLVGQRMQSLEDDIYALEWKKR
>NZ_CP048429.1|WP_062522548.1|1452283_1452832_+|GNAT-family-N-acetyltransferase
MFNYVIDEELTLKLLMPEHARHMFALVERSRARLRQWLPWVDGVTEQAHLQTFIKNSVKQGSENGGFSAGLWVREELAGIIGYHEIDWHNRSVGIGYWLGEGYEGKGYMTSACRVFVDYALLEMDLNRVEIRCATGNRTSRAIPERLGFVFEGVIRQAEKLPSGYVNHAVYGLLRSEWKLLG
>NZ_CP048429.1|WP_062522549.1|1453914_1454559_-|MOSC-domain-containing-protein
MEVISLNVGKPKTVDYRGKPLETGIYKMPAPGKVQLHLEGFDGDGQADLVNHGGADKAVCVYPIEHYAYWEQWLGKKLEYSAFGENITASGLLETEVCIGDVYEIGTTLLQVSQPRFPCYKLAQKHGPADMPAQVLQTGYSGFYFRVLREGQVATGDPIIKQESGKGSFPIKQVLYLMEHGRKDQTGLAELAALETLSAVTREKFQGWLDTAGR
>NZ_CP048429.1|WP_062522550.1|1454539_1455070_-|GNAT-family-N-acetyltransferase
MPQLNRDALTIRPSEIKDARELIVLDNMIWTEDTSPGPLMWRSREDYLMHAPPGSQLVALKDGELCGYVGFGCPSGMESNRHVCEVNIAVHPKFQRMGIGGQLIEAIKSHAAENRIRKLRLRVLSCNEPALAFYRKCGFVEEGRLREEFFLGGRYVDEVFMSCMLTGGKEDGSHLA
>NZ_CP048429.1|WP_062522552.1|1455146_1456358_-|MFS-transporter
MKFLQAYPKEIKVFLIASLINATGSALMWPLVTMYVFDELGRSMKDAGFVLLIQALGGIAGQLLGGSLYHKVGVNRLIVGALALTALSLFSIPAASSSWHLFIILMGLFGLFNSLSLPAIQAFVGFRFAEQRAELFNIIYVCNNIGVALGTSLSGFLGNYMLSFVLNGVTSAVFAVFFFFYLRKVGTAPPHEQTRKKHPQPAQSGWRLMGQIRIYLFMSVGSMFLLIGNSIWNTGVSPFIISEGWPKQTYGFLWTLNGILIFAAQPLVSLIKRWFAATSTAQMTASAVFYLSGYAVILFMPSYAGLFLAMLLATLGEMLISPAMPSFISDHADRNAPFYLGLSGGIGAVGRVVGPYLMGVQFDSGGLAPTGWLACGMAVLSVGFFGLHAYINRTARTLGRNAA
>NZ_CP048429.1|WP_082722622.1|1456476_1458582_-|molybdopterin-oxidoreductase-family-protein
MSYSGDGVFPAVCPLDCPDTCGLLVHKQNGKIIKVEGNPEHPVTKGAICNKVRHMAERVHHPERLLQPLRRVGPKGSGSFTPISWEEAIGEIAGRFKELSAAYGPESILPYSFYGNMGVLSVDGMDRRFFNALGASRLEQSICNSAGSAGWKYTMGFNGGTSPEDTVNADLIIVWGGNIVSTSMHQVVYAEQARKRGAKVVVIDVHRNRTAQWADWFLPLYPGTDTALALGLMHILFRDGMTDDAFLERYTTGHEELRAHVLAYPPERVAEITGIAAEDIEKLAKLYGEAKVSHIHIGNGLQHHDNGGMNVRTIACLPALTGAWLKTGGGAFKSNSGYSSTNDRALTRPDLRPNRRTRTINMNRIGEALELKEQPVMGMFVYCSNPVVVAPDAERVRKGFAREDLFTVVHDLFMTDTALYADIVLPATSTFENVDLYASYWHHYIQLQEPVLDAPGECKSNVEVFSLLGRAMGFDAEAFSESPYDMIRQALDYPRNPYLNGVTLERLTAERFVKLDMSPQADYLEHLPTPSGRIELYSKAMELAGLPPLPTYTPLKEGYDGKRRPQPGTAYPLMFVSPPNHNFLNSTFSNVEKHQRMEKRPTLQIHPEDAAVRGIEEGDELTVYNGRGSVELWAMVTDKMLPGTVISQGLWWEGKGHKQRVNVLTPDRLSDMGNGATFFSATVEVKRRGEAKSSGESIAFK

Crispr_ID: NZ_CP048429_8

• CRISPR_ID: NZ_CP048429_8
• CRISPR_location: 1453340-1453476
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP048429_8

Consensus_repeat	Method
TAAGTGGAAAAAGTACCACTAATC	CRISPRCasFinder

spacers of NZ_CP048429_8

>8.1|1453364|27|NZ_CP048429|CRISPRCasFinder
CAAGCTTCTAGGCCCCTCCACCAACAT
>8.2|1453415|38|NZ_CP048429|CRISPRCasFinder
TGAACCCATTGGCCTTCCAGCACTGGATTTGCCGAAAT

CRISPR arrays and Neighbor proteins around NZ_CP048429_8

CRISPR arrays

The CRISPR arrays of NZ_CP048429_8

>merge|NZ_CP048429|8|1453340-1453476|CRISPRCasFinder
TAAGTGGAAAAAGTACCACTAATCCAAGCTTCTAGGCCCCTCCACCAACATTAAGTGGAAAAAGTACCACTAATCTGAACCCATTGGCCTTCCAGCACTGGATTTGCCGAAATTAAGTGGAGAAATTCCCACTAAAT

>NZ_CP048429|8|8|1453340-1453476|CRISPRCasFinder
TAAGTGGAAAAAGTACCACTAATC	CAAGCTTCTAGGCCCCTCCACCAACAT
TAAGTGGAAAAAGTACCACTAATC	TGAACCCATTGGCCTTCCAGCACTGGATTTGCCGAAAT
TAAGTGGAGAAATTCCCACTAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062521164.1|1446018_1446684_-|molybdenum-cofactor-guanylyltransferase	unknown	unknown	gnl|CDD|133000
NZ_CP048429.1|WP_163704297.1|1449091_1450120_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_143013519.1|1447630_1448905_+|MFS-transporter	unknown	unknown	gnl|CDD|340893
NZ_CP048429.1|WP_062522548.1|1452283_1452832_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NZ_CP048429.1|WP_062522556.1|1459950_1461315_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|181958
NZ_CP048429.1|WP_062522549.1|1453914_1454559_-|MOSC-domain-containing-protein	unknown	unknown	gnl|CDD|225167
NZ_CP048429.1|WP_062522544.1|1450079_1451780_-|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	unknown	unknown	gnl|CDD|235424
NZ_CP048429.1|WP_062522550.1|1454539_1455070_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_CP048429.1|WP_062521162.1|1447244_1447478_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_074648497.1|1464158_1465178_-|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274646
NZ_CP048429.1|WP_062522557.1|1461635_1463276_-|formate--tetrahydrofolate-ligase	unknown	unknown	gnl|CDD|376511
NZ_CP048429.1|WP_062521167.1|1443453_1444131_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP048429.1|WP_062522563.1|1465379_1465718_-|DUF3243-domain-containing-protein	unknown	unknown	gnl|CDD|378681
NZ_CP048429.1|WP_062521166.1|1444060_1445926_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP048429.1|WP_062521169.1|1442391_1443453_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|274368
NZ_CP048429.1|WP_062522554.1|1458858_1459686_-|formate/nitrite-transporter-family-protein	unknown	unknown	gnl|CDD|376497
NZ_CP048429.1|WP_062522552.1|1455146_1456358_-|MFS-transporter	unknown	unknown	gnl|CDD|340887
NZ_CP048429.1|WP_062522546.1|1452010_1452256_+|DUF2164-domain-containing-protein	unknown	unknown	gnl|CDD|378315
NZ_CP048429.1|WP_062522559.1|1463569_1464046_-|glutathione-peroxidase	unknown	unknown	gnl|CDD|223463
NZ_CP048429.1|WP_082722622.1|1456476_1458582_-|molybdopterin-oxidoreductase-family-protein	unknown	unknown	gnl|CDD|239167

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062521164.1|1446018_1446684_-|molybdenum-cofactor-guanylyltransferase	gnl|CDD|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	2.73482e-57
NZ_CP048429.1|WP_062522548.1|1452283_1452832_+|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.496e-30
NZ_CP048429.1|WP_143013519.1|1447630_1448905_+|MFS-transporter	gnl|CDD|340893	cd17335, MFS_MFSD6, Major facilitator superfamily domain-containing protein 6. Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.28897e-54
NZ_CP048429.1|WP_062522556.1|1459950_1461315_-|FAD-dependent-oxidoreductase	gnl|CDD|181958	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed.	2.74342e-136
NZ_CP048429.1|WP_062522549.1|1453914_1454559_-|MOSC-domain-containing-protein	gnl|CDD|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	2.62171e-68
NZ_CP048429.1|WP_062522544.1|1450079_1451780_-|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	gnl|CDD|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
NZ_CP048429.1|WP_062522550.1|1454539_1455070_-|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.01882e-19
NZ_CP048429.1|WP_074648497.1|1464158_1465178_-|LLM-class-flavin-dependent-oxidoreductase	gnl|CDD|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	3.76402e-150
NZ_CP048429.1|WP_062522557.1|1461635_1463276_-|formate--tetrahydrofolate-ligase	gnl|CDD|376511	pfam01268, FTHFS, Formate--tetrahydrofolate ligase.	0
NZ_CP048429.1|WP_062522552.1|1455146_1456358_-|MFS-transporter	gnl|CDD|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.15157e-39
NZ_CP048429.1|WP_062522563.1|1465379_1465718_-|DUF3243-domain-containing-protein	gnl|CDD|378681	pfam11588, DUF3243, Protein of unknown function (DUF3243). This family of proteins with unknown function appears to be restricted to Firmicutes.	5.88044e-32
NZ_CP048429.1|WP_062521166.1|1444060_1445926_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.23618e-174
NZ_CP048429.1|WP_062521169.1|1442391_1443453_-|sensor-histidine-kinase	gnl|CDD|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	6.45286e-66
NZ_CP048429.1|WP_062522554.1|1458858_1459686_-|formate/nitrite-transporter-family-protein	gnl|CDD|376497	pfam01226, Form_Nir_trans, Formate/nitrite transporter.	7.61309e-87
NZ_CP048429.1|WP_062521167.1|1443453_1444131_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.59499e-80
NZ_CP048429.1|WP_062522546.1|1452010_1452256_+|DUF2164-domain-containing-protein	gnl|CDD|378315	pfam09932, DUF2164, Uncharacterized conserved protein (DUF2164). This domain, found in various hypothetical prokaryotic proteins, has no known function.	2.70953e-24
NZ_CP048429.1|WP_062522559.1|1463569_1464046_-|glutathione-peroxidase	gnl|CDD|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	3.85318e-88
NZ_CP048429.1|WP_082722622.1|1456476_1458582_-|molybdopterin-oxidoreductase-family-protein	gnl|CDD|239167	cd02766, MopB_3, The MopB_3 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0

Protein sequences

>NZ_CP048429.1|WP_062522548.1|1452283_1452832_+|GNAT-family-N-acetyltransferase
MFNYVIDEELTLKLLMPEHARHMFALVERSRARLRQWLPWVDGVTEQAHLQTFIKNSVKQGSENGGFSAGLWVREELAGIIGYHEIDWHNRSVGIGYWLGEGYEGKGYMTSACRVFVDYALLEMDLNRVEIRCATGNRTSRAIPERLGFVFEGVIRQAEKLPSGYVNHAVYGLLRSEWKLLG
>NZ_CP048429.1|WP_062522546.1|1452010_1452256_+|DUF2164-domain-containing-protein
MKPIKLPKEQREMITENIRAYFEAERGESIGHLAADNLLEFFLQELGPAIYNGALGDCRTLVGQRMQSLEDDIYALEWKKR
>NZ_CP048429.1|WP_062522544.1|1450079_1451780_-|glutamine--tRNA-ligase/YqeY-domain-fusion-protein
MENRGTPSNFIKNVITEDLSSGKVKEVVTRFPPEPNGYLHIGHAKAIWINFTLADEFGGKTHLRFDDTNPLKEDTEYVNSIQEDVKWLGYEWDELRFASDYFGEMYERAELLIQKGKAYVDDLTADQIREYRGTLTEPGVNSPYRERTTEENLDLFRRMRAGEFKDGEKVLRAKIDMSSPNINLRDPVIYRISHSHHHNTGDAWCIYPMYAFAHPLEDAIEHVTHSLCSLEFEDQRPFYDWVVAECEMPASPHQYEFGRLNLAQTVTSKRKLKLLVDEGHVDGWDDPRMPTISGLRRRGYTPEAIRSFVHETGISKSQGLVDLQMLEHFIREDLKLTVPRTMSVLRPLKVVITNYPEGQTEWFEIENNVENEAMGTRQIPFSREIYIERDDFMENPPNKYFRLFPGNEVRLKNAYFIKCTDFVKDENGEVVELHCTYDPETKSGSGFTGRKVKGTLHWVDAGQAVPAEFRLYEPLISAEEADQEAEVEGMDSAADKPEPSFLDQLNPKSIEILHGFVEPGLKGSVPQDKFQFFRHGYFNVDSRYSTPGHPVFNLIVSLKSSFQPAK
>NZ_CP048429.1|WP_163704297.1|1449091_1450120_+|hypothetical-protein
MPAAIRLIKGIFTFVSATSGLGGPIKGIFTFVSATAGLGGPIKGIFTFVSATSGLGGPIKGIFTFDFATSGLGGPIKGIFTFDFATSGLGSPIKGIFTFDFATSGLGGPIKGIFTFDFATSGLGSPIKGIFTFDLATSGLGSPIKGIFTFVSATAGLGGPIKGIFTFVSATAGLGSPFKGIFTFDSATSGLGGPIKGIFTFVSATSGLGSPFKGIFTFDSATSGLGGPIKGIFTFVSATSGLGGPIKGIFTFDLATSGLGSPIKGIFTFVSATSGLGGPIKGIFTFDFATSGLGSPIKGIFTFDSSHAKRLPTSYDDFGQPLVAYRSFSLIWQAGMSFLEKR
>NZ_CP048429.1|WP_143013519.1|1447630_1448905_+|MFS-transporter
MNNVRHLAGKECPILRENLDKQFSFTSLKWFNFFLYGTVVLFSSFFPLYLQEVGMNKLEIGSLMSVGALVSIIANPFWGIWTDRYQNIRRIVLLMLTGTLVLSQVVFQANTYEMIYVSILFFYFFQGPLFAESNTMILSYIDGTKHRFSSFRLWGSLGWAFTAILAGPVIEWAGVSVLSYLFAALLCAAMISLIVLPRLDHSIGIAPLPFKGFRQIFYHPFFLSFIFFGILVSIPNTMNNTFVSLYITELGGSKTMIGLAVFLSSILEVAVLVLCDRYLKRSIPVLLGWLALVSALFVLRWWLMADATTPLQVAFIQILHCVTFGGFFYVGTRLTMLLVPKPYRSSGQALYTLTWSGISGIMGGVLGGWLYQYLGAQSMYLSGVFLSLIGTLGFGAMWLLVSRGGYHPQDEHKEEDWNEIELNR
>NZ_CP048429.1|WP_062521162.1|1447244_1447478_-|hypothetical-protein
MCRSGFGFAANRHRTQKGSSAAFLCHWRIAALPLSASMAEQAGSSKIRVPVSGTVGSDAWVASRSGCRMTAFPPNIE
>NZ_CP048429.1|WP_062521164.1|1446018_1446684_-|molybdenum-cofactor-guanylyltransferase
MPQFTGILLSGGYSRRMGRDKALLDLEGRPVIARLADELSKVAAGPVIACGEQEREEYRFLGLPQVPDLYPGCGPLAGLHAALHQSPTEWSVVAACDLPFASAEFMRYMMSAVAGPSRDLTPDYTGGGLQIDAAVPESVTGRVQPLLGLYHKRVLPVLEQALHGRRFKVMECLDALEVLYIPEACFTGGPSGPSPLYNMNTPEDYAAAVKLVSTPADDSSV
>NZ_CP048429.1|WP_062521166.1|1444060_1445926_-|ABC-transporter-ATP-binding-protein
MNNNQSGKKQGASLKSFLKLLHGTKPSYGLLAFAVALSVISTLVGLVIPMFTKNLVDGFSLASVSKLQIAGIAGAFIAQTIAGGVSIYLLNYVGQKAVAGLRDRLWRKFLVLPVAYYNDNRTGESVSRMTNDTGIIKTLISEHLASLFTGVISIVGSIAVLLYLNWQMTLVLFTVLPLSALILVPLGRQMYKISKGTQDETASFTATLSGVLSEIRLVKSSGAEQKEYEAGRTGIMNLLSFGIREGKISAMISPLVSFVFMMLLVVVIGYGGMQVSSGALTAGELVAFILYLIQIVMPLTQLTQFFTQMQKAKGASERIIETLAADEEIYEGVEEAKGAEEPIVIDNLSFGYTIGDPVLSGVSFSMLPGQVTAIVGPSGGGKTTLFSLLERFYEPQSGVIKLGAKPISNFSLRSWRKQIGYVSQESPLLSGTIADNLAYGLNREVGVDELRRAAAMAYADGFISELPHGYDTDVGERGVKLSGGQRQRIAIARALLRDPKILMLDEATASLDSQSEAVVQKALSNLMKGRTTIVIAHRLATVVNADQIIFMEKGRITGRGTHAELLREHELYREFAEQQLQLNIPVLPDGGEKEGSAKNGQNPGSGRRSAHPRIGGSLFES
>NZ_CP048429.1|WP_062521167.1|1443453_1444131_-|response-regulator-transcription-factor
MAKILVVDDDPHIRELVEVFLRAEGMEEVYGASDGIEALRLLEDNGVDLAVIDVMMPNMDGWELCKALRRSYDIPILMLTAKGETSQIVKGFELGTDDYLVKPFEPPVLIARVKALLKRYQISAAQSVNVGNLRMNRKTYEVTADQGSITLPLKEFELLFKLASYPGQTLTRDRLIEEIWGYDFEGNERTLDVHVGRLRDRFPAEDYGFAIRTVRGLGYRLEGDK
>NZ_CP048429.1|WP_062521169.1|1442391_1443453_-|sensor-histidine-kinase
MSRSRAGEIVRAVMGIIMIIAGFYLSWNGGYFGLKLLEKHFNWSLTPYRFQLLTMVLQFLILMLLAGIAGLIGRLRGDERAFYIPIITAIRQISKGNFKVELENDRRYGQFGSIVEGINEMASELSRMETMRQDFISNVSHEIQSPLTSIRGFARALRDEGLSAESRAHYLDIIEAEGSRLSGLSDNLLKLSALEAESFPFERTAYRLDKQLQEMILACEPQWLGKNIDVEAELDEVTVQAVKDLLSQVWTNLLHNSIKFTPQGGMITVRLRPLDNRVEVEIKDNGIGIAEDELPRIFERFYKVDKARSTSGGGSGLGLSLVKKIVDIHDGSITITSRPGEGTACVVVLPMQS
>NZ_CP048429.1|WP_062522549.1|1453914_1454559_-|MOSC-domain-containing-protein
MEVISLNVGKPKTVDYRGKPLETGIYKMPAPGKVQLHLEGFDGDGQADLVNHGGADKAVCVYPIEHYAYWEQWLGKKLEYSAFGENITASGLLETEVCIGDVYEIGTTLLQVSQPRFPCYKLAQKHGPADMPAQVLQTGYSGFYFRVLREGQVATGDPIIKQESGKGSFPIKQVLYLMEHGRKDQTGLAELAALETLSAVTREKFQGWLDTAGR
>NZ_CP048429.1|WP_062522550.1|1454539_1455070_-|GNAT-family-N-acetyltransferase
MPQLNRDALTIRPSEIKDARELIVLDNMIWTEDTSPGPLMWRSREDYLMHAPPGSQLVALKDGELCGYVGFGCPSGMESNRHVCEVNIAVHPKFQRMGIGGQLIEAIKSHAAENRIRKLRLRVLSCNEPALAFYRKCGFVEEGRLREEFFLGGRYVDEVFMSCMLTGGKEDGSHLA
>NZ_CP048429.1|WP_062522552.1|1455146_1456358_-|MFS-transporter
MKFLQAYPKEIKVFLIASLINATGSALMWPLVTMYVFDELGRSMKDAGFVLLIQALGGIAGQLLGGSLYHKVGVNRLIVGALALTALSLFSIPAASSSWHLFIILMGLFGLFNSLSLPAIQAFVGFRFAEQRAELFNIIYVCNNIGVALGTSLSGFLGNYMLSFVLNGVTSAVFAVFFFFYLRKVGTAPPHEQTRKKHPQPAQSGWRLMGQIRIYLFMSVGSMFLLIGNSIWNTGVSPFIISEGWPKQTYGFLWTLNGILIFAAQPLVSLIKRWFAATSTAQMTASAVFYLSGYAVILFMPSYAGLFLAMLLATLGEMLISPAMPSFISDHADRNAPFYLGLSGGIGAVGRVVGPYLMGVQFDSGGLAPTGWLACGMAVLSVGFFGLHAYINRTARTLGRNAA
>NZ_CP048429.1|WP_082722622.1|1456476_1458582_-|molybdopterin-oxidoreductase-family-protein
MSYSGDGVFPAVCPLDCPDTCGLLVHKQNGKIIKVEGNPEHPVTKGAICNKVRHMAERVHHPERLLQPLRRVGPKGSGSFTPISWEEAIGEIAGRFKELSAAYGPESILPYSFYGNMGVLSVDGMDRRFFNALGASRLEQSICNSAGSAGWKYTMGFNGGTSPEDTVNADLIIVWGGNIVSTSMHQVVYAEQARKRGAKVVVIDVHRNRTAQWADWFLPLYPGTDTALALGLMHILFRDGMTDDAFLERYTTGHEELRAHVLAYPPERVAEITGIAAEDIEKLAKLYGEAKVSHIHIGNGLQHHDNGGMNVRTIACLPALTGAWLKTGGGAFKSNSGYSSTNDRALTRPDLRPNRRTRTINMNRIGEALELKEQPVMGMFVYCSNPVVVAPDAERVRKGFAREDLFTVVHDLFMTDTALYADIVLPATSTFENVDLYASYWHHYIQLQEPVLDAPGECKSNVEVFSLLGRAMGFDAEAFSESPYDMIRQALDYPRNPYLNGVTLERLTAERFVKLDMSPQADYLEHLPTPSGRIELYSKAMELAGLPPLPTYTPLKEGYDGKRRPQPGTAYPLMFVSPPNHNFLNSTFSNVEKHQRMEKRPTLQIHPEDAAVRGIEEGDELTVYNGRGSVELWAMVTDKMLPGTVISQGLWWEGKGHKQRVNVLTPDRLSDMGNGATFFSATVEVKRRGEAKSSGESIAFK
>NZ_CP048429.1|WP_062522554.1|1458858_1459686_-|formate/nitrite-transporter-family-protein
MAYNKPQGIAEVTVENGIKKAHNPLSTVLILGFLGGAFIALGFLLDIRVIAGAPKEWGSIANFIGASVFPVGLIMVLLAGGELLTGNMMAVPLAFMSKKISLWEMIKNLVLITISNFAGALFVAYFFGHIVGLTADGVYLDKLVDMAGHKIDATFLQAFVSGIGCNWLVALAVWLSYGADNFSGKILGIWFPTMAFVAIGFQHVVANMFLIPAAIFEGHFTWSQYLSNFAPVWLGNLTGGAIFVAFAYWMAYLRKAPAAAHSVDTIVPAGVKKHA
>NZ_CP048429.1|WP_062522556.1|1459950_1461315_-|FAD-dependent-oxidoreductase
MKVAVIGCTHAGTAAIVNTAQLYPEAEITVYERNDNISFLSCGIALYVGGVIKDPQGLFYSSPEKLAELGVKTNMRHEVIQVDTDRKTLRARNLATGQEFDDSYDKLIMTTGSWPIVPKLEGMELDGILLSKNYSHSNTIIERAQQVDRITVVGAGYIGVELVEAFQMNGKQVTLIDGEDRILSKYLDEEFTTPIQKSLEDHGITLALGEKVSSFAGENGKVTKVITSKGEHETDLVILCIGFRPNTELLKGKVDMLPNGAIIVNDYMQTSLPDIYAAGDSCAIHYNPTGKNAYIPLATNAVRMGTLVARNLVSPTIAYMGTQGTSGIKIYEDNIAGTGLTEDAAKAEGMDVESVLLTDNYRPEFMPTFEQVQLKVVYDRLTRRILGAQIMSKMDLTQSINTVSVCIQNKMTVDQLAFIDFFFQPHYNKPWNFLNTAGLQALPVTVPHKETVTV
>NZ_CP048429.1|WP_062522557.1|1461635_1463276_-|formate--tetrahydrofolate-ligase
MRLITEVASAAGIHEEHLELYGKYKSKLSPSLWDELKHKQDGKLVLVTAMNPTPAGEGKTLTTIGLSQALNAAGVKTVAALREPSLGPTLGMKGGATGGGKAQIVPADEINLHFTGDIHAVTSAHNLLSAMIDNHIFQGNLLGLDPQRIVWKRVMDMNDRSLRSIVTGLGDGNGPVRESGFQITTASEIMAVLCLCDGLADLKKRLSRMLVGYDQLGQPVTAKDIGAVEAMAALLKEAVKPNLVQTLEGTPVIVHGGPFANIAHGCSSVIGTRYALKLGDVVVTEAGFGADLGAEKFMDIKCRQAGLTPAAAVLVVTVKSLKYNGGVRKDELHTANRAALLSGLSNMERHIENLGKFGVPVLVALNHFEGDAPSEINDVLEACRRLGVPAAVSKVWAEGGAGGLELAMELKKLLEQGEGQPAAFAPLYEDNLDIPAKINTIVTEIYRGAEVAFSPAAKRSLGIIEKLGLHQLQVCMAKTPYSFSDQPRLLGAPEGFTLGVRDITLSLGAGFAVIITGNIVTMPGLPAKPAAEGIQVDLDGVINGLE
>NZ_CP048429.1|WP_062522559.1|1463569_1464046_-|glutathione-peroxidase
MSIYSFAGVKPSGAEVPFKDYEGKVLLIANTASKCGLTPQYGDLQELYEQYGDQGLVVLGFPCNQFAGQEPGTSEEAEEFCQINYGVTFPIFAKVDVNGPDASLLFQYLKGQQPGEGGSSDIQWNFTKFLVDRSGSVVARVEPKESPESMKEQIEALL
>NZ_CP048429.1|WP_074648497.1|1464158_1465178_-|LLM-class-flavin-dependent-oxidoreductase
MKLSILDQSPVPEGSTPAEALAETASLAIEADRLGYHRFWVSEHHAARGLAGSSPEVLMAHLAAVTTRIRIGSGAVLLPHYSAYKVAENFRVLEALYPGRIDLGLGRAAGGGALAARALQENRTGGAELYELQIQDLLSYLYGAPDESHRFAGLETSPQVSTAPELWLLGSSRDSAALAARLGTGYAYARFINNDGGGMAVRSFWSSFRPSPAASAPQALVSVFAVCAETSAEADRLAASMDLSLVQLEKGHVSTGTPSVETALGYNYTPYDRFRIEDNRRRMVIGSPDEVRRQFTALMEEYQCEEIMFATLVHRYEDKLKSLRLIADACGLHGGAGVN
>NZ_CP048429.1|WP_062522563.1|1465379_1465718_-|DUF3243-domain-containing-protein
MSEHNHVVNKDGNVTMAKVSDALDRIDPEQKELILKNFEDFRAYLGKRIQLAQKIGLGEEQLAAAAEKIADYLAAHEEPRNSEEKLLLELWKAGSKEERHQLAHMLVKLARN

Crispr_ID: NZ_CP048429_9

• CRISPR_ID: NZ_CP048429_9
• CRISPR_location: 1510571-1510647
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: DinG

Consensus repeat of NZ_CP048429_9

Consensus_repeat	Method
GTGGAAAAAGGATCACTAATTCGCTC	CRISPRCasFinder

spacers of NZ_CP048429_9

>9.1|1510597|25|NZ_CP048429|CRISPRCasFinder
CAGCACCATGCGCTCCTGAGATGAG

CRISPR arrays and Neighbor proteins around NZ_CP048429_9

CRISPR arrays

The CRISPR arrays of NZ_CP048429_9

>merge|NZ_CP048429|9|1510571-1510647|CRISPRCasFinder
GTGGAAAAAGGATCACTAATTCGCTCCAGCACCATGCGCTCCTGAGATGAGGTGGAAAAAGGATCACTAATTCAGCT

>NZ_CP048429|9|9|1510571-1510647|CRISPRCasFinder
GTGGAAAAAGGATCACTAATTCGCTC	CAGCACCATGCGCTCCTGAGATGAG
GTGGAAAAAGGATCACTAATTCAGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062522634.1|1519044_1519926_+|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197666
NZ_CP048429.1|WP_062522631.1|1516322_1518467_+|bifunctional-diguanylate-cyclase/phosphodiesterase	unknown	unknown	gnl|CDD|238923
NZ_CP048429.1|WP_062522636.1|1520018_1520495_+|sulfide-reductase	unknown	unknown	gnl|CDD|379334
NZ_CP048429.1|WP_062522623.1|1510790_1511792_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP048429.1|WP_062522615.1|1502123_1503818_+|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl|CDD|223910
NZ_CP048429.1|WP_062522619.1|1506255_1507911_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062522641.1|1522121_1522766_-|TVP38/TMEM64-family-protein	unknown	unknown	gnl|CDD|223475
NZ_CP048429.1|WP_062522732.1|1508974_1510333_+|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl|CDD|366058
NZ_CP048429.1|WP_062522621.1|1507903_1508704_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP048429.1|WP_082722625.1|1520510_1522136_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|223594
NZ_CP048429.1|WP_062522730.1|1495155_1495836_+|CidB/LrgB-family-autolysis-modulator	unknown	unknown	gnl|CDD|377236
NZ_CP048429.1|WP_062522617.1|1504013_1506023_-|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|236645
NZ_CP048429.1|WP_062522625.1|1511885_1512839_-|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	unknown	unknown	gnl|CDD|237373
NZ_CP048429.1|WP_062522611.1|1499514_1501401_+|LTA-synthase-family-protein	unknown	unknown	gnl|CDD|224287
NZ_CP048429.1|WP_062522605.1|1495922_1496891_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP048429.1|WP_062522613.1|1501481_1501913_-|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP048429.1|WP_062522632.1|1518597_1518921_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062522627.1|1512991_1515358_+|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|227334
NZ_CP048429.1|WP_062522608.1|1496945_1499255_-|ATP-dependent-DNA-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl|CDD|224120
NZ_CP048429.1|WP_062522629.1|1515478_1516102_+|hypothetical-protein	unknown	unknown	gnl|CDD|224500

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP048429.1|WP_062522608.1|1496945_1499255_-|ATP-dependent-DNA-helicase	DinG	COG1199_DinG_CAS-IV-A	1.1e-86	286.2	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062522631.1|1516322_1518467_+|bifunctional-diguanylate-cyclase/phosphodiesterase	gnl|CDD|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.41226e-101
NZ_CP048429.1|WP_062522636.1|1520018_1520495_+|sulfide-reductase	gnl|CDD|379334	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family. DsrE is a small soluble protein involved in intracellular sulfur reduction. The family also includes YrkE proteins.	1.85467e-62
NZ_CP048429.1|WP_062522623.1|1510790_1511792_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.16286e-80
NZ_CP048429.1|WP_062522615.1|1502123_1503818_+|methyl-accepting-chemotaxis-protein	gnl|CDD|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.65433e-62
NZ_CP048429.1|WP_062522641.1|1522121_1522766_-|TVP38/TMEM64-family-protein	gnl|CDD|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	7.04711e-29
NZ_CP048429.1|WP_062522732.1|1508974_1510333_+|dicarboxylate/amino-acid:cation-symporter	gnl|CDD|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	3.38759e-112
NZ_CP048429.1|WP_062522621.1|1507903_1508704_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.69303e-83
NZ_CP048429.1|WP_082722625.1|1520510_1522136_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	3.07519e-73
NZ_CP048429.1|WP_062522730.1|1495155_1495836_+|CidB/LrgB-family-autolysis-modulator	gnl|CDD|377236	pfam04172, LrgB, LrgB-like family. The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control of murein hydrolase activity and penicillin tolerance.	5.46768e-81
NZ_CP048429.1|WP_062522617.1|1504013_1506023_-|EAL-domain-containing-protein	gnl|CDD|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	5.64903e-112
NZ_CP048429.1|WP_062522625.1|1511885_1512839_-|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	gnl|CDD|237373	PRK13387, PRK13387, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional.	7.21015e-82
NZ_CP048429.1|WP_062522611.1|1499514_1501401_+|LTA-synthase-family-protein	gnl|CDD|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	9.74181e-90
NZ_CP048429.1|WP_062522605.1|1495922_1496891_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.24244e-47
NZ_CP048429.1|WP_062522613.1|1501481_1501913_-|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.43615e-18
NZ_CP048429.1|WP_062522634.1|1519044_1519926_+|AraC-family-transcriptional-regulator	gnl|CDD|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	2.9593e-28
NZ_CP048429.1|WP_062522627.1|1512991_1515358_+|EAL-domain-containing-protein	gnl|CDD|227334	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms].	7.9399e-107
NZ_CP048429.1|WP_062522608.1|1496945_1499255_-|ATP-dependent-DNA-helicase	gnl|CDD|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	2.52793e-72
NZ_CP048429.1|WP_062522629.1|1515478_1516102_+|hypothetical-protein	gnl|CDD|224500	COG1584, COG1584, Predicted membrane protein [Function unknown].	3.18817e-21

Protein sequences

>NZ_CP048429.1|WP_062522732.1|1508974_1510333_+|dicarboxylate/amino-acid:cation-symporter
MDNNLLSAIETNWHGFVISIVVFGILFLLARKRIGFGTRVLAGLGIGLTAGIFLQYFDLETEAIKTFGSIYVSLIRMLVIPLVFVLVLNSISSLTNLEYLRKIGIKTFAWFLGTTGVASIIGLSVALLFNPGKGIQQTVPEGFEAREIPTFSQVILDLVPSNPVNEAATGKVVPLLIFAIFLAVAIIKVGSKKPEAVKPVRDLIESLTIVLHQVVKFVIRLTPYGVFALIAGITARYGWETLQELGSVIITSYVALIIHFVLIFGGLVLLVAKINPLRFFRKIYPTLTVAFTTRSSYATLPINLEVITKRLHVSPRIASFVAPLGASVNFNGCGGIWPAIVAVFTAQVFGIQLTGTDYVTLVLVSIISSIGVAGVPGPAVISTTVVLTALGLPLEGIAIVAGVEALIDMGRTAVNATGTTVTALLVANSEGEFDREAFNRGDDDEEILLNTV
>NZ_CP048429.1|WP_062522621.1|1507903_1508704_-|ABC-transporter-ATP-binding-protein
MGLPEEPVISISGLWMNYSDRMVLRGIDLEVYRGQIIGYIGPNGAGKSTTVKIMLGLVEGYTGTVRIFGRDIADGDAAYKRRIGYVPEIAELYDSLTAREYLTFIGELYGMERTEADAKAERLMDLLNLKKAYDMRIASYSKGMKQKVLLISSMLHDPDILFLDEPLSGLDANSVMVVKEIFASLAAQGKTIFYSSHIMDVVEKISSRIILINGGDIVADGTFAQLQEQNREGSLEDIFNQLTGFDKYRDIAGEFVAVLGEGAPHE
>NZ_CP048429.1|WP_062522619.1|1506255_1507911_-|hypothetical-protein
MNDFWVLKLLDRLQGGFRRAGVDYKMLRSILQVKLTMDGRRTPTVLRTQKGSQGTEGSPLRVQWIYLLLGLMLILFVVPGSNYMLMMSVLFAVIMFMITTTLISDFSSVMLDLRDKNILFSKPVDRRTLNMAKSLHILIYLVTLTLTLTAPSLVVALFKQGVLFFLVYAAMILLMDCFILVITALLYLLILRVFDGEKLKDIINYIQIILSVGIAVGYQLVPRLFDMTDLTASFQPAWWQYFIAPVWFAAPFEVLVGGNHGVDFTVLAAMSVIVPLVVLLGYIKLMPLFEQSLQKLAEQGAAGKENGRYSGLLSGWLCRDKAEAMFFRFTWSMMRNERDFKLKVYPTVGLSLILPFIFIFNQAWTSDHSLNTESKAYLFIYLCALLLLTAVQMLRYSSSYKGAWIYTAIPLPETAPVYRGMLKAVLLRLMLPLFVLESAVFLWLFGPRILPDLAGVMLVLPLFAVICFRMLPRALPFSEKYEAAKQKDFTGSGFVLLFILMGLAGLHYVVSLLPLGIYIYLVILAAVNVWAWRAAFPHEGSRPGQIPTLGA
>NZ_CP048429.1|WP_062522617.1|1504013_1506023_-|EAL-domain-containing-protein
MDQMGTHYNLWIVLLSFALAATAAYSALNLILQVFHSAGRVRRLWLLSSACVLGSGIWAMHFVGIMASYLPFKVSYHPGIAGFSLLISLCACYLSLWIATMSRLRTGRLLLGGLILGGGISMMHYMGMYSMKLQDKIHYEALIQGLSVAVACLASYTAVFLFHKFKDYAGFSRWKLYSAVFIGLAVTGMHYISLRASFLEVGSWTGARPLLMERDVVLLTGVSLVTLFMLAVSCGAVFLDRHVLERMAYHDPLTELPNRHGLERYFKGEFFSGHSGAVFFVDLDRFKSINDTLGHDIGDMLLQEVAGRLRCVISAKGKVFRLGGDEFLIALPVCTMEDAREEAQHILREVKKAYSIEGNELYVTASVGISMTPLHGTDRSALMKAADTALYTSKDSGKNKFSVFDQEMNRHQLRRMSLEKDLRKALARSEFMVVYQPKWDSLMNVTVGLEALLRWRHPEHGIISPAEFIPIAEETGLIVPITYWMLHDVCGQNKLWHKACVANVAVSINMSARMFEGGSLYDVVEEALVRSGLEPHFLELEITESIAMNNMEETVAQLSKLRNLGVRVSLDDFGTGFSSLGNLDEIPVNTLKIDQVFIRKSKMHSKKAIISNIIAIASNLNMEVVAEGVETPEQIELLQSLGCRVMQGFYYGRPMPVSELGQWFIENTA
>NZ_CP048429.1|WP_062522615.1|1502123_1503818_+|methyl-accepting-chemotaxis-protein
MKLATKLTWMILTVLLLVGSSIGFFGYRAAYHQVDEAAGIELVGCANITTGLIDPADITALVSGDSSKVSAIEDRIGWIVEHKPIFKEAFILSLDGKILAADASLKKRGYKAGDAFYFAEEDKAMITTMKHSAYSKVYTYQGTSLKTGYGPIYQDHDPTKPIIALMAINFDGPLIQERTMDIIVQPFIIGGSILIVAILAAYLMIRRMVSPLTKLSASVNTIARGDLTHEPLLFNSKDEIGTLARDFNDMTLNLRDIITQVNDTSMQVASSSQELSASAQETNRAGEHSANVTIELAEGAGTQLKDLEGSYQAVQDMSRFISEIAGNADSAKDTAANNAQKARLGRQSLDSTTSQIGIVSESIHDLSDIIDMLGSHSKEIENIVGTISGIAEETNLLALNAAIEAARAGEEGRGFAIVAGSVRKLAERSAASAGQIGELVSLIISQMDNAGETMKRSTEEIQQGKEMILSAGRSFSEIETSVSDMSSQSQQISETVGELGLIAGRLVESIQKIVTVSNYTAEGAMTLSASSQEQLAAMEEVESSAGFLSSLAEKLQVLVERFKV
>NZ_CP048429.1|WP_062522613.1|1501481_1501913_-|MarR-family-transcriptional-regulator
MSQQIDPLVERLGLSMWKVQRKIASQMSLHQEIGLTVPQFGLLRMIAQEQNARVIQLADKMEVKSSAVTVMLDRLELLGLSAREQDEHDRRAVIVTLTDKGEKLLEEGKNRFLLLLSEHLAILKPEELQNFADYYQMLDQQER
>NZ_CP048429.1|WP_062522611.1|1499514_1501401_+|LTA-synthase-family-protein
MQKEGEAVSSLTIKRWLIKPFVFFSILFVLKSFLAWGVIFGDLLSWKTLLTEIPFVWALFALIERFASKRKLGYYMTVNLLVTAIFFAAIMYFKYYGVIVTYHAAEQVNQVTAVRNSVFSLMDPYYLLIFADIIVLGIYFFFNKKGRAYKKDNINHRGGKLSHSLLFAVSLALCLFNILPNKASMNEIKKAQEMGILNYEAYTIFAKDKPALVNASEITQEAINKLKGIDPAAVSPLQGAAKGKNLIIIQLESFQSFLLGLKVDGHEITPNLNRLMENSLYLPNFYQMVGQGNTSDAEFVVNSSFYIPPQGAATMAYVDKELPSLPRLLKENGYQTATFHTNDVEFWNRGELYSSLGWEHYYDHKFFGDEDTFFFGPSDEALYRKTADKLKEMDADSKPFYAQVISMSAHHPFTIPEEKYKMKLPERYEGTFVGDYIRSQNYADFAFGQFVDELKADGVWDNSLIMVYGDHMGLPIYSLDHDDKELMKEIYGHEYEYADMLNIPLIIHAEGKIGTQTLDHVGGEVDIMPTAASLLGVSMDNNIHFGQDLTSQSYNLLPQRYYLPTGSFISSSGLLIPGNSFEDNTQFTLASGNKAPAGTEDEYNRALRLRQLSDSYVTQLPDKVKDTE
>NZ_CP048429.1|WP_062522608.1|1496945_1499255_-|ATP-dependent-DNA-helicase
MDNAEIALSVRTLVEYAFSSGSLEPGFRSGAAMAEGTRIHQHIQKQYKEGDRKEVYLKTEIPYEGLLFIIDGRCDGLLAGEDGRLIVEEIKSIAGPLDSTMEGKEVHWAQGFMYAYMIAVDQELSSIEVKLTYVMRGSDEQHSLYRTATREELEAFAAGTVARYAPYAKLRVRHEARRGESIRRLSFPFQDYRQGQRHFAAAVYKTVAEGVNLFAQAPTGIGKTMSTLFPAVKALGEGIAAGIFYLTAKTVNRFAAQEAVLLLIGGGLQLHAITLTAKEKACFREEGLCSKEGCPFAEGYYDRVNAAVLDMLEHETLMTQEVIAVYARRHMVCPFEFSLDAAYACDLVICDYNYIYDPRISLKRLPEERKKKTVLLVDEAHNLVDRGREMFSASLTKAPFLNLQRQYKTVTPALSAAAKAVNGFFIALRKNCNENGEGQWAEYPGELPQLLEAFAAEAEMELASPSSALIALPEDGEGGLLDTYYAVQGMLRTFKTYDERYVTYAEVRRGDVFLKLFNLDPSHLLQQMAKGFRSQILFSATLSPMSYYRDMIGAAEEDYSLRVASPFHKEQWEVSVVPVSTRYHDRADSLIPLSDALRGMVGRKGNYLVFFPSYAYLQNVFEVFTDKYPEITTLVQGSGMSEQAREAFLASFRPDNPQTLLGFAVLGGIFSEGVDLPGDRLNGVMIVGVGLPQVGLERNLLRGYFGSQGKNGFDYAYVYPGMCKVQQAGGRLIRSESDSGIIVLADDRFLQQSYADLLPEEWRDYLIRT
>NZ_CP048429.1|WP_062522605.1|1495922_1496891_-|Gfo/Idh/MocA-family-oxidoreductase
MTLNIGIVGTGWFSKVHADLLSGMEDVKLRAVCGSSKQKGEDMAGPYGAEGYGEITEMLDAHKLDAVYICVPPQSHGAIERALIRREIPFFVEKPLGSSTEIPASLLQDIQEHGLLTSVGYHFRYEENIARLKQLLSGDKVGMIVGQWMGSMPGVAWWRDQEQSGGQFTEQTTHIVDLLRYLGGEVTEVYGMFGNRIMHEQHEGVTVADVGTVSLKLDNGIVANISNTCVLPGEVGQVGLSFYNDKGLLDWNPDRLMEVRSGDSKEYVSSGNPYAAESEAFLHAVRTGDRSRILSDYEDGYKTLKVTCAAYESAKSGLPVKL
>NZ_CP048429.1|WP_062522730.1|1495155_1495836_+|CidB/LrgB-family-autolysis-modulator
MTGLLLLVLTVAVYLLAKRIYASSSKMYASPLIITPLLIISFLLLTGIPYESYNAGGKWLTDLLQPATIAFAIPLHKNFKVLKKHAAEIAAGVLSGTVMAVLSSMLLAKWMHLSGDLATSLVPRSVTTPIAMSISQSIGGVPSITAVFVILTGVLGTLMGPSVLRLFRIDNEIARGVSLGTAAHGTGTSKAFELSSLTGTISSIAMILTALLSIGLAPALLAVFLH
>NZ_CP048429.1|WP_062522623.1|1510790_1511792_-|Gfo/Idh/MocA-family-oxidoreductase
MTQKLRWGIMGCAQIATGSVMPAIRESETGIIQAVASRGLDKSSAVAEEFGVAQAYGSYEELLADPDVDAVYIPLPNHLHREWVIRAAEAGKHVLCEKPIALNSREAAEMVEACRKAGVHLAEAYMYRHHPRIAEVQEIIASGEIGDLRSIRGTFTYNDAGDTSNIRFKSAWGGGSLYDVGCYPLSAARLLFGAEPEAATVQAIFSPEHDNVDMMASGLVEFPGGVSLIFDCGMWAYNRQLLEVLGTEGRIELPMPFNARFDDAEFFVYSGGEVRRARATGANPYVCQADDFAAAVFGAAPVIAAEDPVLNMTLIETCLASARTRQRISLKQG
>NZ_CP048429.1|WP_062522625.1|1511885_1512839_-|1,4-dihydroxy-2-naphthoate-polyprenyltransferase
MNVKSFLQFVELPTKVASMLPFLLGTLYALYRFEDFYVLRFALMLVSLLSFDMATTAINNYYDYKKAAKTHGYGYETHNAIVRYRLKESTVVAAIAVLLALAVGGGIALVAETGLLVFLLGGLSFLIGILYSFGPIPISRMPLGELFSGLFMGFVIIFISAYIHSDQTVVTLLFSEGWASLHVHIAEVLYLFWFSVPAILGIAGIMLANNICDIEDDMDNRRYTLPVYIGRKNALLLFRLLYYVSFADLAVLLLLGVNPVLVALLLLTLIPLRRNIARFEEKQEKASTFILSVKNFMLMSVARIVVLGAAILLKVLL
>NZ_CP048429.1|WP_062522627.1|1512991_1515358_+|EAL-domain-containing-protein
MKLRKKMIFFTCVVALVTLGINYLLLHLIMLNRFEKLDEAALKHSLGDALSSYQKELLDMKTGMLNYSLRDETYRFVEASRSADRPPAADDRFIRSTFNSTAFEVNHLDMMALLDKSGQPLYGGTYDTLRRSISPLTPELHTLFRLMNSRLPALASANDSQTGIVLLDQGPMLITLTPIAGSSTDKPVIGTAVAGRKLKQEEVTPVWEDGTASIQITRATSEMLAQSGGEDRWMGPVSGSMMSIHTVVDDLFGNPGVVFTVKQPRQIYESGQESVYSFRLVFFIVTLLSCIGSMLFVNRSILGRMTSLIKNIRAIGSSKDLSIRIISTGRDEFSDVEHEFNRMIDSLQQAQEELQQQSMLDPLTQLPNRSLFFAKLNAAIGAAKGSNRQIALVFIDLDHFKTVNDTLGHDFGDAMLQEIAFRLTQVVGTHDVVSRLGGDEFTILLSDIPDSAAISAQLSSIQDALSMPHQIQGHLFYCTASIGISMYPQNGDDADYLVKQADLAMLHVKGTGRNHIFQYSEDLEESIRRKKVLSQQLLSAAANAEFEVHYQPILNAERLQVHKVEALLRWTSPSYGPVSPAEFIPLAETSGSIVSIGGWVLRQVCADMQRFRENGLFLTAAVNISALQLMQPGLLELLLKLLHEYELPPSSLELEITESVLVSGDSISESLQQLRAHGFRISLDDFGTGFSSLSYLRRFPVDVIKIDRSFVSEMTPYPQGDVLVKAIIELSHNLGLSVVSEGIELQEQFDMLRRLGSDELQGFYISKPVNAGEIQSVLSQKKLFFGEK
>NZ_CP048429.1|WP_062522629.1|1515478_1516102_+|hypothetical-protein
MSAQSPHTQSVKIVTADPSAIGLFGLAIVTLVASSQKLEITTGLSYCIPWAIFLGAFAQLFASIQDAKHNNTFGMTAFGAYAFFWFGMAGSWLIKLGVFGTVLAEGVDPKQLGFVFLGYLVFTLFMTLGAVEANRVLLVIFVLIDFLFLGLTMDSFGFAAEFFHKLAACSELAIGIVSLYGCGASVLNAHFGRQFLPVGAPLGIFKK
>NZ_CP048429.1|WP_062522631.1|1516322_1518467_+|bifunctional-diguanylate-cyclase/phosphodiesterase
MAFINKKPLTIILGFVVVLQLSLFYYYSLSVDREYRAEKADLSSQAVMLTSNIEERASIVKGVSSFIQTVGFDADPNLINEYLHTAYNNNSSNVMNIMIAPDGLIRYLYPLSGNTAILGKSLLLDSALSSPGMVQETIRSGGITIDGPRTLAQGEYGMVIRQAIYHNNSFTGIVSVTLKIENIVDQLLLKDTQIFVRTEDHTFLFGTPTRKEDKQLVVPVTVYNQHWLMGIPTPSHKKWEVLRSVLWIDMAILLIIAFILYIFWHQSRFNRELERVVSIRTRDLRVSKRLYEKLAHYDSLTEIPNRLYFMDEFERLLQSAEPTQTYTLFFFDLNRFKEINDTLGHSIGDQVIKTLAHRLKNGKVPFKLFARTGGDEFVMVFSGLPREHIPLIAGDISGLISETLLISGAHLSLSTSIGVSLYPEHSLNKDDLLKFADMSMYQAKSQEEANYFIFDWELREKLEQKTMIAKYLHSALEREEFVLHYQPQINAVTGKMIGMEALVRWNHPEKGLIGPGTFITAVEEAGLMIQLTDWVLREVCRQLCEWRSMGLPLHRTSINISNSWFYNRNLIENLLAVLDQYGLETSMLEFEITESTALLEEHYPLLQQMRDHGIVVSIDDFGTKYSSLNYLKHFPVNKIKIDRTFITGIGVSSIDETIIKSIVYVASQLGYDLIAEGVETQEQLDFLIKHNCPHIQGFLFFPPLPAEDIHKVAS
>NZ_CP048429.1|WP_062522632.1|1518597_1518921_+|hypothetical-protein
MNALSTPEWMATLVFALILAIIAYRVIRSMPHMAGNITAFRKRTLVWTQVALVLAVLQLNFKAGDWRFGIILGLIVLFTGSVWLAARYYDLRRPEAADPAEQKTGKE
>NZ_CP048429.1|WP_062522634.1|1519044_1519926_+|AraC-family-transcriptional-regulator
MNNSSSYGVYGFRFSEPDHLPLCNLFAVGHDVVTDASYHWNGMDRTDGPLLLFQYTAEGSGIFETEQETFRIGSGRAFLAEIPGSHRYYHPGDSVPWEFYFLLFRPQPLLPLWEDIKAKLGTAPAIVPGSRPIRILRDIVHEAYSGRISDPYIASSLLHQFMMELGRLSSSGPRDAAEWPTAVRDSVQFIEERYSSMIGQEQLAEQMGLSKFHLLRTFSKYVGLTPNEYLNRTRIERAIELLTATDLSVEAIASRVGYSSGSYFIKVFQKLTGQTPGSFRSGSGSLNYSRLFF
>NZ_CP048429.1|WP_062522636.1|1520018_1520495_+|sulfide-reductase
MNKRMNLLMFSGEYDKAMAALILANTARDIDVEVTMFFSFWGLFLVRDPDKMTLEDKSIYEKLMDVITPKGPEQLPLSRMNFSGLGKLMLEEMIEDQGAPKLIHFLKGARKKNIKFYACKLSVDIMGFKPEELLPEVEIIDAAAYLKDALESDMQLFI
>NZ_CP048429.1|WP_082722625.1|1520510_1522136_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MLLGFNLFPPAGIYWAIRRNGFAVDYRTVSNHWLEGLSVLSINRASTAEEPASLLEHFAPFREHTIGGRHVISTPYGRHPLLYADWTASGRLYEPIERKIQEMFGPYVSNPHTESNTTGLTMTLAYNEARKIIKNHVNAGPGDALLFCGNGTTGAVNKLQRLMGLKLPEWLREDYLCAPEDRPVIFVSHMEHHSNLLPWQEGIGDVVTVPAGADGTADLRELERLLMLYRNRRFKIGSFTACSNVTGIHIPYHRLAAAMHRHGGVCFVDFAACAPYASINMHQADPLEKLDAIFFSPHKFLGGPGTGGVLLFDSGLSRGQLPDEPGGGTVVWVDAWGGRRYIHSVEVREDSGTPGFLQAFRTALCLKLKEAMNGDGGFMLAREQQLCSRLLTGLHSIPGCTILAGEHTRRHGIVSFNLEDIHYNLVVRLLNDRFGIQARGGCSCAGPYGHHLLGLDRELSREFIQAIHAGDQSRKPGWVRLSLHPIMTDGEVEFMIHAVHSIVRHISVWRQDYRYNRSTNSWVHPADEAGNEAAVSGLFAL
>NZ_CP048429.1|WP_062522641.1|1522121_1522766_-|TVP38/TMEM64-family-protein
MFFLDSMSWLTEERLLQLLEQYRSLGPLPGIGLTFMKSFVPPLPTIAIVGLNGAVYGLWLGFLYSWLGLVAGCVTTFLIIRRIASHPYLRKWALRPKVARGMKWVRNSGFSYVFLLSLFPVGPFVVINMAAGLAQMRLRSYLLALCAGKAIMVFAVSYIGNDVDRFIRHPGEIIYVLLFIGVSLWGVKAIEARFTRAAQAREEQLPAGGPLQRK

Crispr_ID: NZ_CP048429_10

• CRISPR_ID: NZ_CP048429_10
• CRISPR_location: 1688326-1688399
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_10

Consensus_repeat	Method
AAGTGGAAAAAGGGAAACTAATT	CRISPRCasFinder

spacers of NZ_CP048429_10

>10.1|1688349|28|NZ_CP048429|CRISPRCasFinder
TGCTCGTGCACCATATTCCGCGCAGGTT

CRISPR arrays and Neighbor proteins around NZ_CP048429_10

CRISPR arrays

The CRISPR arrays of NZ_CP048429_10

>merge|NZ_CP048429|10|1688326-1688399|CRISPRCasFinder
AAGTGGAAAAAGGGAAACTAATTTGCTCGTGCACCATATTCCGCGCAGGTTAAGTGGAAAAAGGGTAACTAATT

>NZ_CP048429|10|10|1688326-1688399|CRISPRCasFinder
AAGTGGAAAAAGGGAAACTAATT	TGCTCGTGCACCATATTCCGCGCAGGTT
AAGTGGAAAAAGGGTAACTAATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062525806.1|1688604_1689387_-|MerR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|133400
NZ_CP048429.1|WP_062525801.1|1685281_1685866_-|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl|CDD|225158
NZ_CP048429.1|WP_062525812.1|1696225_1698349_-|carbohydrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|379528
NZ_CP048429.1|WP_062526152.1|1690706_1692338_+|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NZ_CP048429.1|WP_062525810.1|1694315_1694858_-|hypothetical-protein	unknown	unknown	gnl|CDD|368573
NZ_CP048429.1|WP_062525798.1|1684381_1685224_+|NAD(+)-diphosphatase	unknown	unknown	gnl|CDD|234699
NZ_CP048429.1|WP_062525791.1|1680316_1681138_-|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133378
NZ_CP048429.1|WP_062525813.1|1698369_1699053_-|DUF4956-domain-containing-protein	unknown	unknown	gnl|CDD|379819
NZ_CP048429.1|WP_143013515.1|1693519_1694299_+|AAC(3)-family-N-acetyltransferase	unknown	unknown	gnl|CDD|376807
NZ_CP048429.1|WP_062525794.1|1681297_1682395_+|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl|CDD|234792
NZ_CP048429.1|WP_074648480.1|1686585_1686870_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_CP048429.1|WP_062525796.1|1683256_1684114_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187578
NZ_CP048429.1|WP_062526150.1|1685985_1686411_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224759
NZ_CP048429.1|WP_062525809.1|1692419_1693310_+|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl|CDD|224513
NZ_CP048429.1|WP_163704308.1|1682339_1683071_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062525805.1|1686877_1688092_-|chromate-transporter	unknown	unknown	gnl|CDD|273350
NZ_CP048429.1|WP_062525803.1|1686435_1686657_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062525811.1|1694972_1695887_+|phosphatidate-cytidylyltransferase	unknown	unknown	gnl|CDD|226955
NZ_CP048429.1|WP_062525814.1|1699045_1699789_-|polyphosphate-polymerase-domain-containing-protein	unknown	unknown	gnl|CDD|143622
NZ_CP048429.1|WP_062525808.1|1689613_1690471_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062525806.1|1688604_1689387_-|MerR-family-DNA-binding-transcriptional-regulator	gnl|CDD|133400	cd04773, HTH_TioE_rpt2, Second Helix-Turn-Helix DNA binding domain of the regulatory protein TioE. Putative helix-turn-helix (HTH) regulatory protein, TioE, and related proteins. TioE is part of the thiocoraline gene cluster, which is involved in the biosynthesis of the antitumor thiocoraline from the marine actinomycete, Micromonospora. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Proteins in this family are unique within the MerR superfamily in that they are composed of just two adjacent MerR-like N-terminal domains; this CD mainly contains the C-terminal or second repeat (rpt2) of these tandem MerR-like domain proteins.	3.53998e-40
NZ_CP048429.1|WP_062525801.1|1685281_1685866_-|NAD(P)H-dependent-oxidoreductase	gnl|CDD|225158	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only].	1.21001e-38
NZ_CP048429.1|WP_062526152.1|1690706_1692338_+|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.74426e-56
NZ_CP048429.1|WP_062525810.1|1694315_1694858_-|hypothetical-protein	gnl|CDD|368573	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. Amidase_YiiX is a family of permuted papain-like amidases. It has amidase specificity for the amide bond between a lipid and an amino acid (or peptide). From the structure, a tetramer, each monomer is made up of a layered alpha-beta fold with a central, 6-stranded, antiparallel beta-sheet that is protected by helices on either side. The catalytic Cys154 in UniProtKB:Q74NK7, Structure 3kw0, is located on the N-terminus of helix alphaF. The two additional helices located above Cys154 contribute to the formation of the active site, where the lysine ligand is bound.	0.0015034
NZ_CP048429.1|WP_062525798.1|1684381_1685224_+|NAD(+)-diphosphatase	gnl|CDD|234699	PRK00241, nudC, NAD(+) diphosphatase.	7.61299e-104
NZ_CP048429.1|WP_062525791.1|1680316_1681138_-|MerR-family-transcriptional-regulator	gnl|CDD|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	7.73371e-18
NZ_CP048429.1|WP_062525813.1|1698369_1699053_-|DUF4956-domain-containing-protein	gnl|CDD|379819	pfam16316, DUF4956, Domain of unknown function (DUF4956). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.	2.16519e-14
NZ_CP048429.1|WP_143013515.1|1693519_1694299_+|AAC(3)-family-N-acetyltransferase	gnl|CDD|376807	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase. This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.	5.77757e-108
NZ_CP048429.1|WP_062525794.1|1681297_1682395_+|GIY-YIG-nuclease-family-protein	gnl|CDD|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	2.58446e-67
NZ_CP048429.1|WP_074648480.1|1686585_1686870_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.82498e-09
NZ_CP048429.1|WP_062525796.1|1683256_1684114_-|SDR-family-oxidoreductase	gnl|CDD|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.49511e-90
NZ_CP048429.1|WP_062526150.1|1685985_1686411_+|MarR-family-transcriptional-regulator	gnl|CDD|224759	COG1846, MarR, Transcriptional regulators [Transcription].	3.88036e-15
NZ_CP048429.1|WP_062525811.1|1694972_1695887_+|phosphatidate-cytidylyltransferase	gnl|CDD|226955	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only].	2.00859e-72
NZ_CP048429.1|WP_062525809.1|1692419_1693310_+|diacylglycerol-kinase-family-lipid-kinase	gnl|CDD|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	3.02371e-83
NZ_CP048429.1|WP_062525805.1|1686877_1688092_-|chromate-transporter	gnl|CDD|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	7.09266e-100
NZ_CP048429.1|WP_062525812.1|1696225_1698349_-|carbohydrate-binding-domain-containing-protein	gnl|CDD|379528	pfam14262, Cthe_2159, Carbohydrate-binding domain-containing protein Cthe_2159. Cthe_2159 from Clostridium thermocellum is the first representative of a novel family of cellulose and/or acid-sugar binding beta-helix proteins that share structural similarities with polysaccharide lyases.	5.46821e-75
NZ_CP048429.1|WP_062525814.1|1699045_1699789_-|polyphosphate-polymerase-domain-containing-protein	gnl|CDD|143622	cd07750, PolyPPase_VTC_like, Polyphosphate(polyP) polymerase domain of yeast vacuolar transport chaperone (VTC) proteins VTC-2, -3 and- 4, and similar proteins. Saccharomyces cerevisiae VTC-1, -2, -3, and -4 comprise the membrane-integral VTC complex. VTC-2, -3, and -4 contain polyP polymerase domains. For S. cerevisiae VTC4 it has been shown that this domain generates polyP from ATP by a phosphotransfer reaction releasing ADP. This activity is metal ion-dependent. The ATP gamma phosphate may be cleaved and then transferred to an acceptor phosphate to form polyP. PolyP is ubiquitous. In prokaryotes, it is a store of phosphate and energy. In eukaryotes, polyPs have roles in bone calcification, and osmoregulation, and in phosphate transport in the symbiosis of mycorrhizal fungi and plants. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	3.00634e-56
NZ_CP048429.1|WP_062525808.1|1689613_1690471_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.86498e-06

Protein sequences

>NZ_CP048429.1|WP_062525805.1|1686877_1688092_-|chromate-transporter
MDTGSQKPVEAGGTKSRGAALLEVLGVSLKLGLTSFGGPVAHLGYFHNEYIRRRKWMDERSYADLVALCQFLPGPASSQVGIGIGVVRAGLLGGVIAWLGFTMPSVIALAVFALVLQGIDIADAGWIHGLKIVAVAIVAQAVLGMGQKLTPDRGRVTIAVTAAVVALSWHAAYAQIIILTAAGVIGLFLYRGQPDRGPDLPIRISRTVAVCCLALFFLLLIALPLLRPSAGTGGFALFDSFYRSGSLVFGGGHVVLPLLEREVVPAGWVSREDFLAGYGAAQAVPGPLFTFASYLGVMAAGFKGGIIATLGIFLPAFLLVIGALPFWNGLRSSPNVQGALAGINAAVVGILLAALYDPLWTSAILKPLDFALAAILFVMLMFWKLPPWVIVLAGAAGGVLMQLI
>NZ_CP048429.1|WP_074648480.1|1686585_1686870_+|GNAT-family-N-acetyltransferase
MSQPATAIGHYGDKHCWIGLFILHHSYAGQGIGSIALNALERRLRQENAAQVRLAVQLENLAGAAFWQKNGYAVIKSTKDQRGNKVEVYEKPLL
>NZ_CP048429.1|WP_062525803.1|1686435_1686657_-|hypothetical-protein
MKNKKTDPAMLVTIMTYSGGGLGQTSDVHSLIHGMNVASMVTAGSAVIALILAFFIKRKEAPIESLTNSIPVK
>NZ_CP048429.1|WP_062526150.1|1685985_1686411_+|MarR-family-transcriptional-regulator
MDKELFQKFVAFTTAVHQITSDISKDIKAEALTPLQYKILEYIAVSQPVTLSEISDCMHMSMPNTSRELKKLSEKQLCDKITDPADRRKQGITLSPAGEAMMNEAFQHIAIRFTERIGDLTEEQRKEIERALDLLQEKVFY
>NZ_CP048429.1|WP_062525801.1|1685281_1685866_-|NAD(P)H-dependent-oxidoreductase
MNTLVIYTHPNHQSLSYAFLQEVLRGSRENAKVAEIQVLDLYEEGFDPVLVFNEHKRRRDMHIDPALAKYREQLQWADKIVLVYPIWWGRPPAMLMGYIDQMFASGFAYRDKGGLLPEGLLKGKSVVCISTMQGPTHYPLLMLHNAHKVLMRKALFNFVGIRNVKFFEFGSMESKRGKHAQKLERIYQYFKTAS
>NZ_CP048429.1|WP_062525798.1|1684381_1685224_+|NAD(+)-diphosphatase
MSKPRASIYKRYIPAVTPPPEFSGSAYWLIFHSGKLLVTETAGTAGVPFVPALEQLSMVPLRTLYLGTFEGLPCFAAQVQAETPEPAGMAFRPLRSLYESLDEDLFHLAGKGIQMLAWDETHQFCGRCGTATELAQTEHSRSCPACGLVSYPRIAPAVITAILKDNRILLAHSPHFVSNMYGLIAGFVEPGETLEDCVQRETMEEVGIKVKNIRYFASQQWPFPHSLMVGFLAEYESGEITVDGEELDHADWFELDRLPVIPSPVSIARKLIDWVVEHHS
>NZ_CP048429.1|WP_062525796.1|1683256_1684114_-|SDR-family-oxidoreductase
MKIALTGATGHLGSIVAETLLKSVAPENLVVSVRNPEKADNLRARGVDVRHGDFDQPETLDTAFAGVDRLLIVSADGDNDTRIRQHKAAVDAAVRAGVGFIVYTSVGHADSSPLFLAPVHRATEEFIRESGIPYSFLRNNWYLENEIGSIQAVQAGAPWLTSAGDGKVGWATRRDYAEAAAAVLAGEGHENTVYELSGTPATQAELAAVVGGVLGKEVPVQQVDDAAYADIMAKAGVPEAALPIVVAIQQAIREGALDIASSDFAKLLQRPLTPLSEGVRDLLGN
>NZ_CP048429.1|WP_163704308.1|1682339_1683071_+|hypothetical-protein
MLKRSGSCWKAIPKSRHAKVQKGNHKHKPAGGASTTVFLPLFRGKPAGGASTTAFLPLFWGKPAGGASTTVFLPLFRGKPGGGASTTAFLPLFRGKPAGGASTTAFLPLFRGKPAGGASTTAFLPLFRGKPAGGASTTAFLPLFRGKPAGGASTTAFLPLFWGKPAGGASTTAFLPLFRGKPAGGASTTAFLPLFRGKPAGGASTTAFLPLFRGKPAGGAPILVRRHHNFLNNKRGFPPVHRP
>NZ_CP048429.1|WP_062525794.1|1681297_1682395_+|GIY-YIG-nuclease-family-protein
MNLAEKVAGLPLSPGVYLMKDSLGHIIYVGKAKQLKKRVQSYFYNAKGHSPKVKQLVRNIRDLDYKLTDTEFEAFMLECQLIKEIKPMYNKKMKNPLAYSYIVIRTDTAYRQLAVTYDSAEYGDSLYFGPYTSRSTVERAVQGIKESQRILCSTPHARNALCLNHSLGLCLGMCGGGEALERYEQIMHSVAGLLNGNDLRILDELQQRMNLAAENFEFETAAKYRDYCTAVRSLLQKEKVIGFTEQNKNIVVLEPMQEQMFKLILIRGSEILDRARLDAGQMSAEQLCGVIQSAIKNSFSMPPHGDPGVISRHKLDEAQIIYSYLTGSSGSYSVIPQEWLEAEDGAAVAEAVRELLEGYSEVAPR
>NZ_CP048429.1|WP_062525791.1|1680316_1681138_-|MerR-family-transcriptional-regulator
MKYSIGEFASILGVTADTLRLYEKHDIVRPMKDQHNNYRYFSDLDARNLLSSRWYRSMQIPLQDVAGLINDAPAEQVIQSIADARQQLEEEIRRSVMLLDKINEIHAELGRIGEAFYTCRIREVPGMYRIQQTDKNQLLQKECLKQTVQAWMELLPFTFYSFRIENSENIPGAAELEYSWGLALLEEDQRKLEVGVNESMEYIGPSTCITAVIASSYEEDLGRESFQFMLDYAEAEGLAITGDIRGKILFTERMSKGNQTYLEIDIPFENNFT
>NZ_CP048429.1|WP_062525806.1|1688604_1689387_-|MerR-family-DNA-binding-transcriptional-regulator
MQYYKPVEIASLLSISTSALRHYESWGVVPAPERAANGYRMYTKLHLAYFRCLRAMIPGFGYKITYEVLRNIQQGNMDQALWLTGAEQARLQEEKAAADQTLALLQDPEISLIKGRPVSHRMPIGEAAAIAGVQPSAIRHWEKEGLLTPLRNPENGYRMYTAVHLRQILLIRTLRRTVYFLERMKELVEAVEQHSLEKAKEVTEQALGRLHQRNRQQYSGVHQMVELCAQAGLMRPEDTAAPSMSTYPGKEKVMYKAGGK
>NZ_CP048429.1|WP_062525808.1|1689613_1690471_+|alpha/beta-hydrolase
MLRVQMHDASWIEVEIQGEGPSLLLPVNPRPIDGQQAAEMMKWGVDPALGRSLIDRLSGSCRVIAFDYEGHVQSCAKPDTLTPDNLSSDFMAIADAASAQQFAYYGYSWLALSGMQLALRTDRLSALIMGGFPPVGGPYKEMLRVTLAAYHLSVAAQKNPNPSPAAWDGNADEFDWSQVEVTMSEAQTKQFVTLYQALQAFDDRTAQERITCPRLCFAGSADLIEYGERWGAVSVDIAGPLVREQAVLETLGWDVAVLEGLDHTQAMQPAHVLPLLKPWLDANLH
>NZ_CP048429.1|WP_062526152.1|1690706_1692338_+|diguanylate-cyclase
MGFVVWIDLILFFVLFALFVYIFVSVNITNLHKVYLAFHFTMMIWPFCQFAIKTTGNPTYQLFYVKAAFVDSALLSTGWVFFTILLTGQTRFLRRKILLLLSTPAIFSAACIIFSHHRWFVQPVNGGYIQRTYGPLFWLFIAVIIIQVVTSLYVISTALVRDLVPRVRKQVMLVLKGILAVTVFILLDIVLNVVLDPYLPVIPGMTSLGILLSAVFFVISINRDNVFDITTIAHQDVMDTIGHGILVLDEYDNVVEINRFLGPHMHLNRGEQFNIRMIFPESSPAIEAFILGYYERPLERIEIEILHTVIQRYIKIQATAIMVSGLQVGRIVTFQDITELQRLIHETHQQNRALQERNHSLIMVQKELSETNRQLQQMAITDSLTGCYNRHYLTQQLEDEVILNREKHIPFALILLDIDFFKNVNDTYGHLAGDEVICQTVEVLKQELRQTDVLARYGGEEFIIYLPDTREAEALHVAEQLKARVEMNQVTIANAAGPVSVTISMGLLTINDFSLNSNLFEDVDQALYQAKNKGRNRIVHIAR
>NZ_CP048429.1|WP_062525809.1|1692419_1693310_+|diacylglycerol-kinase-family-lipid-kinase
MTQATIIVNPSSGKEEALDYLSSVEELLQSQGYEVTVKETQQEGDATGYSIAACEAGADMIVSIGGDGTLHETINGLSGQAHQPKLGIIPLGTVNDFARALQIPLIPEEAIRTLASSRVQLVDAGRLNSRLFINVVAAGKLAESLTSVSSDDKSRFGALAYFKEGIKELAGNASHPLTIQHDGKTWVGETPLFLAALTNSVGGFEKLAPEAAVDDGLIHCYIIKNLHFFNTLTVSLSVLLGNLKNHKDVDYFTAREVTVSSPDTVRTNVDGEEGPALPIKLSVLPRHIRVVVPDSL
>NZ_CP048429.1|WP_143013515.1|1693519_1694299_+|AAC(3)-family-N-acetyltransferase
MIFTKEDLINQFTNCGLTKGQHIFVHTSLSKFGFIIGGAETFIRSLLEIVGEEGTLMMPSQTWKNLDPSTGVHWEEPAEWWPMIRQHWPAYDKEITPAIGMGVVAEMFRKWPGAARSDHPARSVAAVGKHAEYLTQDHDLSNIFGIGSPLDKLYQLNGYVLLAGVGYDKNTSLHLAEARADFPAKKRVYDSSAIMVKGRREWVTYETQAVNDEDFVRLGEEYDKEMNLKVHKAGKAEIRFMEQRPLVDWATAWMEKNRS
>NZ_CP048429.1|WP_062525810.1|1694315_1694858_-|hypothetical-protein
MEADHSVFILLTNTGTLFTKLIQGYTKAPYNHASIGFDRELKELYSFGRKNPSNPLNGGFVHEDLRTGTFSKYPDTTCVIYELRVSGREVEKMRRVLHVFIRSRQKYLYNMLGVIGIALKEPVEFSNSYFCSQFVAEILDRSGIKLWNKLPALVTPDDFRQSDRLELIYQGKLREYVPGQ
>NZ_CP048429.1|WP_062525811.1|1694972_1695887_+|phosphatidate-cytidylyltransferase
MNSSLVKLILIFAALSAVHLIYMLVSRLQKDKDYTGIGFRIKTWWGMVFIFCLATLFNPVVSLLSLMVLAFFALKEYFSMIRTRKADRRLFLWAYLSIPLQFYWIYIEWYGMFIVFIPVYVFLLLPLPRLINKGTLGFLRSVSATQWGLMLMVFGLSHLAYFQFATPEYGAGLVLFLVVLTQLNDAVHYLASIYFGKRKVVPTANPNLTWEGFACAFAVTTGVSYLIYPYLTPLTPIFGLFSGVLISLAGFFGSLTVSVLKRDLLIGDDDKFAALQKSYLSRVDSLAYTSPVFFHVIRYFFDFM
>NZ_CP048429.1|WP_062525812.1|1696225_1698349_-|carbohydrate-binding-domain-containing-protein
MKNFLTGSKIGMVLLSAALMTACSTNTGANTNAAELANVKTTDLVEYDADDTTTAWTADASTDIALAGTNAEIKGAGATAKGGSVTITEAGTYILSGTLSDGQIIVDEQAEGTVRLVLNGVTLKDSDSAPVYIKEAGKVVITLQEGTENSVADGGTYVFADAGTEEPSAAIFSKADLTINGTGKLTVTGSYKDGISSKDDLKIAGGTIDITAADDGIVGKDLVAVQDGNLTIKAEGDGIKSTNDEDAAKGFVAIAAGTFDITAGNDGIQAETAEVIDGGTFSLVTNGGYENAEAKTGEQGPGGMGMGGNRGGGFGDQGAADGTSAATTDAAPVVDTAAAATNTAAVTTTAVTTAVATAEATAATAETESTSAKGLKAGGDLTVNGGSFTINAADDALHSNSNVSVTDGEFKITAGDDGIHADSLTSLSGGTIDITKSYEGIEGGNITISGGDIHVVASDDGVNVAGGNDSNAAQGTAQQDQFTSSGSGLLTISGGSVTVDSTGDGLDSNGSISMTGGTAIVNGPTNDGNGPLDYDGTFDMTGGLLVAAGSSGMAQAPGEDSSQYSVGMSFTEAQQAGTLVHLEDGDGNNILTFAPSKNFSSVVVSSPDLKQGRSYTLSTGGTSTGTAVDGLYTDGDYTGGTQVVAFDISGSVTWLNESGVTTANTGRGPGGFGGGDGGTRPERGAGGTPPQGGAGGTPPDAAGETAN
>NZ_CP048429.1|WP_062525813.1|1698369_1699053_-|DUF4956-domain-containing-protein
MLDSIFSAALTSADLTFTEAILTIFISIVLGGLISFTYMKTNPGGYSQSFTLTMVLLPVIVAIIILLIGSNVARAFSLAGAFSIIRFRSAPGDPKDITFVLFTMASGLACGVGSFGYAALFTLILCVLMFILNRTGFGARKSQQKTLKVTIPENLGYEEAFAEVFNTFNVRYELKKIRTTELGSLYELVYEVTIDEHTSQKELLDAVRTRNGNLDLSLTMCPATTDY
>NZ_CP048429.1|WP_062525814.1|1699045_1699789_-|polyphosphate-polymerase-domain-containing-protein
MAIEVFNRYENKYLLDHAAYLKLYNDLLEYMEPDDYNKQHEFYSITNLYYDTAHDSLIRSSLAKPKYKEKLRLRAYGVPDQDTKVYLEIKKKVFGLVNKRRTSLKLQEAYDFVATGVEPEYREYMNKQVIEEIKYFLSRYDLMPKVYLSYERKALFCKNNRDLRITFDTNIRSRRYDLKLEHGTHGEYLMPQGQWLMEVKAEKTIPVWLAKMLSEHRMYRTSFSKYGNEYKKMLKASKIERESALYA

Crispr_ID: NZ_CP048429_11

• CRISPR_ID: NZ_CP048429_11
• CRISPR_location: 1938769-1938870
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_11

Consensus_repeat	Method
GTCAAGCGATTCCCGGAGGGAGAGCG	CRISPRCasFinder

spacers of NZ_CP048429_11

>11.1|1938795|50|NZ_CP048429|CRISPRCasFinder
TTCCAATGCACCTAAAGTGGCTCACCCGCCAGTAACCAGCAAGCGCCGTC

CRISPR arrays and Neighbor proteins around NZ_CP048429_11

CRISPR arrays

The CRISPR arrays of NZ_CP048429_11

>merge|NZ_CP048429|11|1938769-1938870|CRISPRCasFinder
GTCAAGCGATTCCCGGAGGGAGAGCGTTCCAATGCACCTAAAGTGGCTCACCCGCCAGTAACCAGCAAGCGCCGTCGTCAAGCGATTCCCGGAGGGAGAGCG

>NZ_CP048429|11|11|1938769-1938870|CRISPRCasFinder
GTCAAGCGATTCCCGGAGGGAGAGCG	TTCCAATGCACCTAAAGTGGCTCACCCGCCAGTAACCAGCAAGCGCCGTC
GTCAAGCGATTCCCGGAGGGAGAGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_020427905.1|1933602_1933932_+|hypothetical-protein	unknown	unknown	gnl|CDD|283747
NZ_CP048429.1|WP_062520113.1|1947462_1948317_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl|CDD|234652
NZ_CP048429.1|WP_019914493.1|1946703_1946979_+|Veg-protein	unknown	unknown	gnl|CDD|226872
NZ_CP048429.1|WP_062520102.1|1944585_1945470_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl|CDD|234708
NZ_CP048429.1|WP_062520091.1|1939871_1941155_+|HD-domain-containing-protein	unknown	unknown	gnl|CDD|224004
NZ_CP048429.1|WP_039833496.1|1936381_1936747_+|DNA-replication-initiation-control-protein-YabA	unknown	unknown	gnl|CDD|377617
NZ_CP048429.1|WP_074648811.1|1931206_1932841_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|224893
NZ_CP048429.1|WP_020427902.1|1930804_1930990_+|hypothetical-protein	unknown	unknown	gnl|CDD|378490
NZ_CP048429.1|WP_062520098.1|1944037_1944589_+|ribonuclease-M5	unknown	unknown	gnl|CDD|273019
NZ_CP048429.1|WP_062520096.1|1942697_1943858_+|DUF348-domain-containing-protein	unknown	unknown	gnl|CDD|270620
NZ_CP048429.1|WP_062520078.1|1932841_1933483_+|dTMP-kinase	unknown	unknown	gnl|CDD|234814
NZ_CP048429.1|WP_062520081.1|1934435_1935410_+|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl|CDD|181214
NZ_CP048429.1|WP_062520105.1|1945539_1946442_+|sporulation-peptidase-YabG	unknown	unknown	gnl|CDD|377528
NZ_CP048429.1|WP_062520094.1|1941209_1941980_+|TatD-family-hydrolase	unknown	unknown	gnl|CDD|238635
NZ_CP048429.1|WP_062520084.1|1935550_1936351_+|stage-0-sporulation-family-protein	unknown	unknown	gnl|CDD|224688
NZ_CP048429.1|WP_025706632.1|1933974_1934418_+|YaaR-family-protein	unknown	unknown	gnl|CDD|377152
NZ_CP048429.1|WP_062520088.1|1937612_1938509_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl|CDD|381175
NZ_CP048429.1|WP_062520109.1|1947110_1947284_+|small,-acid-soluble-spore-protein,-alpha/beta-type	unknown	unknown	gnl|CDD|365990
NZ_CP048429.1|WP_062520086.1|1936842_1937616_+|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	unknown	unknown	gnl|CDD|226608
NZ_CP048429.1|WP_020427913.1|1939309_1939564_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|131898

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_020427905.1|1933602_1933932_+|hypothetical-protein	gnl|CDD|283747	pfam06153, CdAMP_rec, Cyclic-di-AMP receptor. CdAMP is a family of bacterial cyclic-di-AMP receptor proteins. Cyclic-di-AMP (c-di-AMP) is a bacterial secondary messenger involved in various processes, including sensing of DNA-integrity, cell wall metabolism and potassium transport. CdAMP_rec has a ferredoxin-like fold and is structurally related to Pii-signal transduction proteins.	4.50538e-60
NZ_CP048429.1|WP_062520113.1|1947462_1948317_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl|CDD|234652	PRK00128, ipk, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	5.72091e-180
NZ_CP048429.1|WP_019914493.1|1946703_1946979_+|Veg-protein	gnl|CDD|226872	COG4466, Veg, Uncharacterized protein conserved in bacteria [Function unknown].	2.32646e-34
NZ_CP048429.1|WP_062520102.1|1944585_1945470_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl|CDD|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	4.00115e-138
NZ_CP048429.1|WP_062520091.1|1939871_1941155_+|HD-domain-containing-protein	gnl|CDD|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	4.86806e-135
NZ_CP048429.1|WP_039833496.1|1936381_1936747_+|DNA-replication-initiation-control-protein-YabA	gnl|CDD|377617	pfam06156, YabB, Initiation control protein YabA. YabA is involved in initiation control of chromosome replication. It interacts with both DnaA and DnaN, acting as a bridge between these two proteins.	2.61657e-35
NZ_CP048429.1|WP_074648811.1|1931206_1932841_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|224893	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].	2.01879e-125
NZ_CP048429.1|WP_020427902.1|1930804_1930990_+|hypothetical-protein	gnl|CDD|378490	pfam10764, Gin, Inhibitor of sigma-G Gin. Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB.	9.43096e-17
NZ_CP048429.1|WP_062520098.1|1944037_1944589_+|ribonuclease-M5	gnl|CDD|273019	TIGR00334, Ribonuclease_M5, ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases. [Transcription, RNA processing].	2.62265e-54
NZ_CP048429.1|WP_062520096.1|1942697_1943858_+|DUF348-domain-containing-protein	gnl|CDD|270620	cd14667, 3D_containing_proteins, Non-mltA associated 3D domain containing proteins, named for 3 conserved aspartate residues. This family contains the 3D domain, named for its 3 conserved aspartates, including similar uncharacterized proteins. These proteins contain the critical active site aspartate of mltA-like lytic transglycosylases where the 3D domain forms a larger domain with the N-terminal region. This domain is also found in conjunction with numerous other domains such as the Escherichia coli MltA, a membrane-bound lytic transglycosylase comprised of 2 domains separated by a large groove, where the peptidoglycan strand binds. Domain A is made up of an N-terminal and a C-terminal portion, corresponding to the 3D domain and Domain B is inserted within the linear sequence of domain A. MltA is distinct from other bacterial LTs, which are similar to each other. Escherichia coli peptidoglycan lytic transglycosylase (LT) initiates cell wall recycling in response to damage, during bacterial fission, and cleaves peptidoglycan (PG) to create functional spaces in its wall. PG chains (also known as murein), the major components of the bacterial cell wall, are comprised of alternating beta-1-4-linked N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), and lytic transglycosylases cleave this beta-1-4 bond.	3.9832e-34
NZ_CP048429.1|WP_062520078.1|1932841_1933483_+|dTMP-kinase	gnl|CDD|234814	PRK00698, tmk, thymidylate kinase; Validated.	1.50512e-99
NZ_CP048429.1|WP_062520081.1|1934435_1935410_+|DNA-polymerase-III-subunit-delta'	gnl|CDD|181214	PRK08058, PRK08058, DNA polymerase III subunit delta'; Validated.	2.54374e-104
NZ_CP048429.1|WP_062520105.1|1945539_1946442_+|sporulation-peptidase-YabG	gnl|CDD|377528	pfam05582, Peptidase_U57, YabG peptidase U57. YabG is a protease involved in the proteolysis and maturation of SpoIVA and YrbA proteins, conserved with the cortex and/or coat assembly by Bacillus subtilis.	3.86629e-156
NZ_CP048429.1|WP_062520094.1|1941209_1941980_+|TatD-family-hydrolase	gnl|CDD|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	4.22096e-126
NZ_CP048429.1|WP_062520084.1|1935550_1936351_+|stage-0-sporulation-family-protein	gnl|CDD|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	3.79795e-105
NZ_CP048429.1|WP_025706632.1|1933974_1934418_+|YaaR-family-protein	gnl|CDD|377152	pfam03885, DUF327, Protein of unknown function (DUF327). The proteins in this family are around 140-170 residues in length. The proteins contain many conserved residues. with the most conserved motifs found in the central and C-terminal region. The function of these proteins is unknown.	1.42515e-43
NZ_CP048429.1|WP_062520088.1|1937612_1938509_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl|CDD|381175	cd11648, RsmI, Ribosomal RNA small subunit methyltransferase I (RsmI), also known as rRNA (cytidine-2'-O-)-methyltransferase. RsmI is an S-AdoMet (S-adenosyl-L-methionine or SAM)-dependent methyltransferase responsible for the 2'-O-methylation of cytidine 1402 (C1402) at the P site of bacterial 16S rRNA. Another S-AdoMet-dependent methyltransferase, RsmH (not included in this family), is responsible for N4-methylation at C1402. These methylation reactions may occur at a late step during 30S assembly in the cell. The dimethyl modification is believed to be conserved in bacteria, may play a role in fine-tuning the shape and functions of the P-site to increase the translation fidelity, and has been shown for Staphylococcus aureus, to contribute to virulence in host animals by conferring resistance to oxidative stress.	9.78244e-123
NZ_CP048429.1|WP_062520109.1|1947110_1947284_+|small,-acid-soluble-spore-protein,-alpha/beta-type	gnl|CDD|365990	pfam00269, SASP, Small, acid-soluble spore proteins, alpha/beta type.	0.000966635
NZ_CP048429.1|WP_062520086.1|1936842_1937616_+|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	gnl|CDD|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	1.78358e-93
NZ_CP048429.1|WP_020427913.1|1939309_1939564_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl|CDD|131898	TIGR02851, stage_V_sporulation_protein_T, stage V sporulation protein T. Members of this protein family are the stage V sporulation protein T (SpoVT), a protein of the sporulation/germination program in Bacillus subtilis and related species. The amino-terminal 50 amino acids are nearly perfectly conserved across all endospore-forming bacteria. SpoVT is a DNA-binding transcriptional regulator related to AbrB (See pfam04014). [Regulatory functions, DNA interactions, Cellular processes, Sporulation and germination].	6.52901e-17

Protein sequences

>NZ_CP048429.1|WP_062520088.1|1937612_1938509_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MTISCQSSFQNKNQQAGTGSLYLVGTPIGNLEDMTYRAVRTLQECEIIAAEDTRMTRKLLSHFEITPSMLFSYHEHNKAASGPELIRYIIEGKNLALVSDAGLPAISDPGADLVALAVSHGIPVIPIPGANAALSALIASGLPTTSFTFIGFLPRERKDIRNVLSGLRSAQGTLLFYESPHRVSKTLAHLQEAFGNRRIVLARELTKRYEEFLRGTIEECLVWLSEHPPLGEYVIVLEGESKEEAELAESSWWRELSIEEHVTHYETSGQTRKDAMKKAASDRGLAKRDIYNALLERE
>NZ_CP048429.1|WP_062520086.1|1936842_1937616_+|tRNA1(Val)-(adenine(37)-N6)-methyltransferase
MTNFYNNGPVPLHPAERVDDLLTHDLRIIQSDEVFSFSMDAVLLARFASVPPRGRVLDLCTGNGVIPMLLTTRTKASIEGIEIQPRLADMARRSVVMNNLAERVTIHEGDLRELHLTAGYGVYDAITVNPPYMPLNGSDLKLNNHQAMARHELGCTLEEVIQACVRLVRTGGKVSMVHKPQRLVDIISLMRQYRLEPKLIRFVHPRAHLEANMVLIEAARDGKPEVRLQPPLIVYNEDNQYCPEILDIYYGSKEGKS
>NZ_CP048429.1|WP_039833496.1|1936381_1936747_+|DNA-replication-initiation-control-protein-YabA
MEKMNIFAHMQEMEAQMESMRASLGEWKLTVKELMEANQRLSLENEQLRKILKREAPLDPAAHSAEAEALLAASEGAEEVVGEGYDNLARLYHEGFHICNVYFGHLRTEGDCLFCLSFLNK
>NZ_CP048429.1|WP_062520084.1|1935550_1936351_+|stage-0-sporulation-family-protein
MYSVVGVRFKKAGKIYYFDPLDFPIERDQCVIVETARGVEYGKVVVGKKEVEEADVVLPLKKVMRIAGETDARVVEENKGAAKDAFTTCLNKIRDHGLKMKLVDVEFTFDRNKIIFYFTAEGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMLGGLGPCGRVLCCSSWLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKFEHDNYESTKEEMPAVGKLVVTSLGDGKVVGINAGSRTVHVQLFEVGKVKELPMDDVVVK
>NZ_CP048429.1|WP_062520081.1|1934435_1935410_+|DNA-polymerase-III-subunit-delta'
MSFHDILGQEDAKRLLQNALRKDAVSHAYLFTGPSGSGQMKTALMFAQAIFCTACEDDACGECLECRKVEHGNHPDLSLLKPDGASIKIDQIRELQRMFSYRSEGVNPKVYIIEGADRMTVQAANSLLKFLEEPPAPAVGILISDNSSSLLPTIQSRTQRIPFSPLHPDIMLQALSSEGVPVPLARCAVSLTSGLDGCRELLAQNWFAEMRNLVLQLAKESLGKGSSAVATAGQKLFKTGLGEHLDILFSMFHLWFKDMLYFLYRKHESIVFIDQLDFISRHARQRSTEQWVAYMEFAAESKGKLRSNANAQLCLEQFLIRLES
>NZ_CP048429.1|WP_025706632.1|1933974_1934418_+|YaaR-family-protein
MKINPGYRPLKSELPTAEGTGRPVQQKTFTDIFQQQGEQKTMDELNQKIKDIQQQGDRLAKSMTVRELAIYRNMIKKFLEETARRGVTLKETKGWDRRGRGKRYKLLEEIDAALLNLADDLLESEQGRIDLLGRVGEIRGLLINLSF
>NZ_CP048429.1|WP_020427905.1|1933602_1933932_+|hypothetical-protein
MNLIIAIIQDKDSNRLSSELVKANFRATKLASTGGFLRAGNTTFMIGVDDSQVEAVLTVIRNSCKVREQLVTPVTPMSGTTDSYLPLPVEVQVGGATVFVLPVDRFEHY
>NZ_CP048429.1|WP_062520078.1|1932841_1933483_+|dTMP-kinase
MAREGFFITLEGGDGSGKTTVLGRVAAYLQNHSMPYLITREPGGIEIAEKIRSIILDPAHTAMDARTEALLYAASRSQHLAEVVEPALKEGLTVLCDRFVDSSLVYQGYARGLGIEQVRSINQFATGGRMPDLTFYLDVDPEVGLSRIAANQDREVNRLDLESMAFHRKVREGYRQVVESDPQRIVVLDANRPIHMVEQDIVQTLKDRILKDF
>NZ_CP048429.1|WP_074648811.1|1931206_1932841_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MDRILPGRAPVYEMLEQYRMKGNISYHVPGHKNGEAYRGSETAGFLSEVMGYDVTEITGTDDLHHPEGVIREAQELAADCFGAEESFFLVGGSTAGNLALILTVCSEPGMTLILQRNVHKSVIHGLMLAGVQAIFIEPQIDPLSGLAVAPAAEAVQAALAAYPEAAAVLVTMPNYYGMGSDLAPLARVCHTSGVPLLVDEAHGAHYGQHPALPAGALMCGADGVVQSTHKMLAALTMGAMLHVQGPWLDRALLRQRLAMVQSSSPSYPVMASLDLARRLVHSQGAGAFTAGLAAVDVLRRGLATLPRYGLLQPAAPLQGVCGGAGSAAAAGTPPQGQAAYSTQDPFKAVIYDAAGGLGGFELQRRLEEKGMVPEMSDDRHVVLAFSLGSKAEDAQQLLAALREIAEETSGGSANPPESTAKQELSTEYLHTEPAEGQVQASVKYSTWNNFANDLISSPVLFSMKPVNPLETEGVRLEYSAGRTAAEMVIPYPPGIPLLYPGERISEHICNRLINLRQGGAKFQACADPALQHIQVYNIKKGGDA
>NZ_CP048429.1|WP_020427902.1|1930804_1930990_+|hypothetical-protein
MEQQTEQACIICGQMKEEGIVIVSHFICEDCEAEMVRTEAEDAKYRFFVGRMKKIDLQKNA
>NZ_CP048429.1|WP_020427913.1|1939309_1939564_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MMKSTGIVRKVDELGRVVIPIELRRTLGIGEKDALEIYVDGERIMLKKYEPACIFCGNAENVTYFKGKIVCHDCISAIPTPVTN
>NZ_CP048429.1|WP_062520091.1|1939871_1941155_+|HD-domain-containing-protein
MKQLLTEEKVFKDPVHNYIHVQDTIIWRLINTREFQRLRRIRQLGTSYLTFHGAEHSRFSHSLGVYEITRRIISQFERSGYKDWMPEESLLTLCAALLHDLGHGPFSHSIEEAFEMNHEDWTCRIIQENTEITAILREVGEDFPQKVASVIAKTYEHEIVVNLVSGPLDADRMDYLLRDAYYTGVNYGTIDIDRILRMLRPYNGRVVVKESGMHAIEDYLMSRYQMYWQVYFHPVTRSSEIILRQIFRRAKELFQEGYSFRFMINPLSDLFGGEINVEQYLLLDEALVQTAFMQWTLEDDEILANLCSRFIHRKLYKYVEMDHLDSETIDEIRRSFAGAGLHPDYDLEIDYPTDLPYDVFRPGEGFDSKQILLLDRHDKLREISEVSDIVRSISGIHRGRYHLYFPQDKLQEALTQLPVSIGRIFAK
>NZ_CP048429.1|WP_062520094.1|1941209_1941980_+|TatD-family-hydrolase
MRLFDTHTHLDAPQFDEDREEAIARALEAGVSKMINIGFNRETIPTTMKLAETYDYIYAAVGWHPVDAIDMKEGDMDWIASLCSHNKVVAIGEIGLDYYWDTSPKEVQHEVFRKQIGLARELKMPICIHNRDAHEDVVRILREEKANEIGGVMHSFSGSWETAKMCLDLGFHLSFGGPVTFKNARVPKEVLAQTPMDRLLIETDSPYLTPHPFRGKRNESAYVKLVAEAAAEIKGIDLQELAEITYANALERFGIV
>NZ_CP048429.1|WP_062520096.1|1942697_1943858_+|DUF348-domain-containing-protein
MGVFQPEVSHDSQSSSRSFAFRWKQVNPRVLSLAGAASIVIALVILLYVHGQSIKEITLVIDGKAQTLETRDALLSDVLAKEQISLQPHDALSIGLSDEIKDGDRVVINRAQAIKITTDGTTKTLYTTEDTIGQAIDKLGIGLESYDKIYPSLGTAVSADMEVKIVRINKQVVQRTTDLPFRVIKTADPSLTKGTVRVAQAGKPGVMIQHIEKIYQDGELASMRMVGKEVQTVTKDKIIAIGTKPLPKAAVATTVTSKSTTTPKSSKVSAKSNNVASKAGVDFEYKKIIRNVSMTAYSSEEPGIGTRTASGTRVTEGRTIAVDPSVIPIGWWVYIEGLGFRRAEDTGGAIKGNKVDVYYDSLSHARNFGRKSRTIYVIGPVKPELN
>NZ_CP048429.1|WP_062520098.1|1944037_1944589_+|ribonuclease-M5
MIKELIVVEGKSDTVAIKRAVEADTIETGGSAVDRKVIAKIALAMERRGVIILTDPDHAGERIRKIVSSKVPGCKHAFIPEKDATRKGDIGVENASPEAIRHALEHVHTSFEGAPALIGLEDLMAAGMMVHPRAAERRMALGNLLGIGYCNGKQLYKRLAMFGITREEFTIALAQIDQGGITS
>NZ_CP048429.1|WP_062520102.1|1944585_1945470_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MSGNNNISSPARTKEIIQRYGFSFKKSLGQNFLIDQNILDKIVDAAGLDQAAGALEIGPGIGALTERLASAAGAVTAVEIDRRLIPILRDVLASYPHVNIRNDDVLKVNLRELFAEDFAEVERVSVVANLPYYVTTPILMKLLEEKLPLDNIVVMIQKEVAERMAASPGGKEYGSLSIAVQYYSEPELVCIVPRTVFIPQPNVESAVIRLKVRERPPVEVADEKHFFEVVQASFTQRRKTIANNLKARFFPEEGRERLESLLAEAEIEPSRRGETLSLEEYARLSAVLLAAGIV
>NZ_CP048429.1|WP_062520105.1|1945539_1946442_+|sporulation-peptidase-YabG
MNLGDLVVRKSYGGDVTFRVENIVQNGAVIKGTEFRLLADAPLDDLVQVPPSRITERGQQAQIKATESLTKLRKDRQEQSQRSGESLTGVWPQSPREAAYFEVPGKVLHLDGDALYLKKSLSLYEQLRIPAEGHHVHESKMAETLYRLLPRVRPDIVVITGHDGVLKQQHTYDLYSLNSYKNSQNFVTAIQVAREYERNFDTLTIVAGACQSHFEALLGAGANFASSPGRILIHALDPVYIAAKASFTSIRESVSLGDVLNNTISGSQGMGGIETRGSFRIGMPRLQNLSTLKVAPSVML
>NZ_CP048429.1|WP_019914493.1|1946703_1946979_+|Veg-protein
MANNALLEIKRSLEAHVGHKITLRANGGRRKTVERTGVLEETYPSVFIVKLDQEQQTFKRVSYSYADILTESVEITVCEDDGQMRIMYIKA
>NZ_CP048429.1|WP_062520109.1|1947110_1947284_+|small,-acid-soluble-spore-protein,-alpha/beta-type
MSRRKRGMMSEELKTELAKELGFYETVERDGWGGIRAKDAGNMVKRAIQLAEEARRS
>NZ_CP048429.1|WP_062520113.1|1947462_1948317_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MKMYEKAPAKINLMLDVLSKRADGFHEVEMIMTMVDLADRLELSELKRDSIIISSQAGYIPLDEKNLAFQAARLIKDRYNVKSGVHIHLDKRIPVAAGLAGGSSDAAATLRGLNRLWRLDIPAQELQELGAELGSDVPFCVTGGTALATGRGERLTPIQSPPQCWVVLAKPPINVSTAEVYGRVRANSIAVHPSASRMQAAIEAGDFAAVCAGLGNVLEDVTLKLHPEVQQLKEAMVKLGADGVLMSGSGPTVFGLVSKQSKVARIYNGLRGFCKEVYAVRSLS

Crispr_ID: NZ_CP048429_12

• CRISPR_ID: NZ_CP048429_12
• CRISPR_location: 2300313-2300386
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: WYL

Consensus repeat of NZ_CP048429_12

Consensus_repeat	Method
AATTAGTGTACCTTTTTCCACTT	CRISPRCasFinder

spacers of NZ_CP048429_12

>12.1|2300336|28|NZ_CP048429|CRISPRCasFinder
CACCTGCGGAGAATAGGGTGCTGGGGCA

CRISPR arrays and Neighbor proteins around NZ_CP048429_12

CRISPR arrays

The CRISPR arrays of NZ_CP048429_12

>merge|NZ_CP048429|12|2300313-2300386|CRISPRCasFinder
AATTAGTGTACCTTTTTCCACTTCACCTGCGGAGAATAGGGTGCTGGGGCAAATTAGTGTACCTTTTTTCCACT

>NZ_CP048429|12|12|2300313-2300386|CRISPRCasFinder
AATTAGTGTACCTTTTTCCACTT	CACCTGCGGAGAATAGGGTGCTGGGGCA
AATTAGTGTACCTTTTTTCCACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062520745.1|2293861_2294857_+|DnaJ-domain-containing-protein	unknown	unknown	gnl|CDD|223560
NZ_CP048429.1|WP_062524905.1|2308651_2309581_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224048
NZ_CP048429.1|WP_062520744.1|2292991_2293459_+|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl|CDD|107228
NZ_CP048429.1|WP_062524909.1|2310683_2311511_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293840
NZ_CP048429.1|WP_074647925.1|2294971_2295340_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524887.1|2295448_2295796_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062525280.1|2300700_2301960_-|MFS-transporter	unknown	unknown	gnl|CDD|340891
NZ_CP048429.1|WP_062524893.1|2304147_2305764_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173853
NZ_CP048429.1|WP_062524899.1|2305846_2306797_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NZ_CP048429.1|WP_062524901.1|2306801_2307647_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224094
NZ_CP048429.1|WP_062525278.1|2299116_2299902_+|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|293786
NZ_CP048429.1|WP_062524890.1|2296111_2298754_+|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl|CDD|274529
NZ_CP048429.1|WP_062524907.1|2309664_2310111_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524888.1|2295770_2296103_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_082722740.1|2302026_2303562_-|glycosyltransferase	unknown	unknown	gnl|CDD|133005
NZ_CP048429.1|WP_062520739.1|2290725_2292159_-|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl|CDD|224089
NZ_CP048429.1|WP_062524903.1|2307663_2308680_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223521
NZ_CP048429.1|WP_062520742.1|2292261_2292828_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NZ_CP048429.1|WP_062520738.1|2289499_2290525_+|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl|CDD|225253
NZ_CP048429.1|WP_062524912.1|2311735_2312575_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187632

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP048429.1|WP_062520738.1|2289499_2290525_+|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	4.7e-64	211.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062520745.1|2293861_2294857_+|DnaJ-domain-containing-protein	gnl|CDD|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	9.88233e-65
NZ_CP048429.1|WP_062524905.1|2308651_2309581_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	3.88081e-125
NZ_CP048429.1|WP_062520744.1|2292991_2293459_+|Hsp20/alpha-crystallin-family-protein	gnl|CDD|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	6.40138e-38
NZ_CP048429.1|WP_062524909.1|2310683_2311511_+|MBL-fold-metallo-hydrolase	gnl|CDD|293840	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.07039e-17
NZ_CP048429.1|WP_062525280.1|2300700_2301960_-|MFS-transporter	gnl|CDD|340891	cd17333, MFS_FucP_MFSD4_like, Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins. This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.05507e-27
NZ_CP048429.1|WP_062524899.1|2305846_2306797_+|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.50033e-116
NZ_CP048429.1|WP_062524901.1|2306801_2307647_+|ABC-transporter-permease	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.97046e-97
NZ_CP048429.1|WP_062525278.1|2299116_2299902_+|ankyrin-repeat-domain-containing-protein	gnl|CDD|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	2.50491e-14
NZ_CP048429.1|WP_062524890.1|2296111_2298754_+|ATP-dependent-chaperone-ClpB	gnl|CDD|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_CP048429.1|WP_062524893.1|2304147_2305764_+|ABC-transporter-substrate-binding-protein	gnl|CDD|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.4107e-133
NZ_CP048429.1|WP_082722740.1|2302026_2303562_-|glycosyltransferase	gnl|CDD|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	2.97636e-16
NZ_CP048429.1|WP_062520742.1|2292261_2292828_+|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	2.73374e-30
NZ_CP048429.1|WP_062524903.1|2307663_2308680_+|ABC-transporter-ATP-binding-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	0
NZ_CP048429.1|WP_062520739.1|2290725_2292159_-|PLP-dependent-aminotransferase-family-protein	gnl|CDD|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	6.44543e-130
NZ_CP048429.1|WP_062520738.1|2289499_2290525_+|YafY-family-transcriptional-regulator	gnl|CDD|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.48046e-60
NZ_CP048429.1|WP_062524912.1|2311735_2312575_-|SDR-family-oxidoreductase	gnl|CDD|187632	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs. 17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	3.91068e-80

Protein sequences

>NZ_CP048429.1|WP_062525278.1|2299116_2299902_+|ankyrin-repeat-domain-containing-protein
MPFVSKDNPLVVSVIKAIRTGDVPSLRRLLAGSSGLVTSRITGIDDEYNSRGESRTLLHVVTDWPGHFPNNVAIAAALIEAGADVNARFTGPHSETPLHWAASCDDIEVLDMLLDSGADIEAPGAVIAGGTPLDDAVAFAQWRAAHRLIERGAKFALWHAAALGLLDAMEAHFAGESLSQRYPWGAGHPSPPDEVTVAFWCACHGGQRHAAKYLLDRKAELNWIAVWDRLTPLDAAMRSNAADLAQWLRGLGAKSAQELVP
>NZ_CP048429.1|WP_062524890.1|2296111_2298754_+|ATP-dependent-chaperone-ClpB
MDFNKLTQKLQEAVAAAQSLAAAAGHQEIDNLHLLKALLQQHEGLLPRLLQKMNIPVPELLQGTEALLQRKPSVSGSGAGTMRRYASPSLIAVLEQAEKEAAQMQDEFVAVEHAVLAMVSDSSSGNRELRGLFTSRGVTRDKLLEVLAEIRGHQRVTSREPEATYEVLEKYGRDLVAEVRAGKIDPVIGRDGEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAHRIVRKDVPEGLKDKTIFSLDMSALIAGAKYRGEFEERLQAVLKEIRESDGRIILFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLVSEPDVEDTISILRGLKERFEVHHGVKIHDSALVAAGVLSNRYITDRFLPDKAIDLVDEACAMIRTEIDSMPGEMDEVTRRLMQMEIEEAALKKETDDASKRRLETLQRELADLKEKHLEMTARWEKEKSAIQGLRELKKKLEQARKDLVDAQEVYDLNKSAELSYGIIPDLERQLKAAEEAASQDQESRLLREAVTEEEIADIVSRWTGVPVSRLVEGERDKLLRLEDTLHERVVGQEEAVRLVADAVLRARAGIKDPNRPIGSFLFLGPTGVGKTELAKALAVSLFDREDGMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRQPYTVVLLDEVEKAHPDVFNILLQLLDDGRLTDSQGRMVDFKNTIIIMTSNIGSPHLIQGTDDNGELTNAVKDRVMKELSSHFRPEFLNRVDDIVMFKPLQLDEIEQIVVKLVDGLRLRLADRGVGLALSESAVRFIAREGFDPVYGARPLKRFIQRSLETRVARALIAGEAEEGSVMEVNEAGGELSVTITHPKPAEALNSI
>NZ_CP048429.1|WP_062524888.1|2295770_2296103_+|hypothetical-protein
MNSPGTTIDCLSFGRSVAAGFGANNGRSAAVWCVVVGFGGNNGKSAVVWRVVAKFGANNGKNAFVGSVVAGFGGNNGRNAVVGRIGRPKRPAIDAGGGPESRASKQITER
>NZ_CP048429.1|WP_062524887.1|2295448_2295796_+|hypothetical-protein
MRGKSTLDFGAGGRYEEMKGKSTFEFAAGGRYERMRGKSTLEFAAGGRYEEMKGKSTFEFAAGGRYERMRGKSTFEFGAGGRYEGMRGKSTLESAAGGRYEGMRGKTFEFSGDDY
>NZ_CP048429.1|WP_074647925.1|2294971_2295340_+|hypothetical-protein
MTGTKEIRGKATLEFGAGGRYEGMRGKSTFELAAGGRYEEMRGKSTLEFVAGGRYEGMRGKSTFDFGAGGRYEEMKGKNTLEFAAGGRYERMRGKSTFELAAGGRYEEMRGKNTLDFGAGGR
>NZ_CP048429.1|WP_062520745.1|2293861_2294857_+|DnaJ-domain-containing-protein
MAANYYEALGVGEKASKQEIKKAYQRLAKKWHPDVNKAPEAEAKFKEAAEAYEVLGNDEKRKAYDQELHYGFGGAASSGARRSGASSSAYGDSPFGAGWGGSSSFGGSIPDDDLFGMFFGSRGAADRAGFDFFSGSTAAGSPFGEARSTMQAQLEVSLEQAYKGGSIRVQVGGRDVNVSIPPRSAEGTVIRIPGSSGNGAVQGGDLLISLHLLPHDIYEPDAGDLYGTVEIAPWQAVLGGEAKVPLPDGSSVKLKIPAGMAGGQTLRLSGKGLKRPDGANGDILFAVEIVIPAGLTEAEKKLYRQLAEAGSFQAGPKRKGPGASRRKAAMG
>NZ_CP048429.1|WP_062520744.1|2292991_2293459_+|Hsp20/alpha-crystallin-family-protein
MFDLVPFGKRRDDAFGVLAKSLNEVFNDDFFAPIKSSTMSFRTDIRENEQAYLIEAELPGFKKEEIDIDYASPYLTIKAVRKEDNSEENKDHQVVRRERRYGEYVRRFYVQDVAEDGIRASLKDGLLTLSVPKQQKPLGKRIEIQDDGSSGERLQ
>NZ_CP048429.1|WP_062520742.1|2292261_2292828_+|GNAT-family-N-acetyltransferase
MSRNSGMLWGEKVYLRPLNGEDAELYYHMFYDAEARRLTGTQKHITKEQIAAYIERKAEDDSGVLLLIALKDTDETIGDIAIQDMDRNNRTANLRIAIGDEAHQGKGYGREALLLMLDYGFGILNLHRIELEVYAYNKRAAHVYESIGFVREGVRRQTLFYNHQYHDVVMMSMLENEYRERYISMKVK
>NZ_CP048429.1|WP_062520739.1|2290725_2292159_-|PLP-dependent-aminotransferase-family-protein
MLLVPNLSDTGGVPYYIQLYDYLKKEIISGSLPTGTRLPSIRIMAAQLQLSTTPVELAYQQLLSEGFIVSRPRSGYYVQQVHGLGGTAAEPDRPPLPVRSITPRDSRTYPYDFHISRNDFSLFPDKIWRSLYQEQLANPDLLQYGDPQGEPALRESIAAHLRQFRGLRCTAEQVVIGGDQYTLCSLLALLLQEKAMKLAIENPGYHLLPAAFQRHGFQILPLQLQEDGLDVTQLYASGANCVYISPSHQFPRGMVMPIANRLALLEWARRNSSYIIEDDYDGEFRYHGRPIPALQGLLEDSPVIYMCSFAQSLAPALCIHYMVLPKSLVPDYHSLKSELYLEHSASRLNQIALHYFMERGHFAKHLRRMRLVYQRKHDLLLSAIQRNFGEKAAVHGQGAGFHILLTLHSGGSARQLAEKAAAAGIRVTPMSYTWWSRPEHDEPEFILGFGGIAEERIEEGIRRLAGVWDKGLEATAF
>NZ_CP048429.1|WP_062520738.1|2289499_2290525_+|YafY-family-transcriptional-regulator
MSKSKRLLDLMMTVNRKRKFTVKELAEEFGVSSRTILRDLQELGELGVPLYSEVGPHGGYQVLNERILPPIAFTEEEAVAIFFASHALRHYKYLPFKEESVAALQKFYHYMSGDVRDRIDEMKHRIDFVTPARQAEFPYLAILLEAATGQKVLQIDYETKGKRMERAIQPIGIYASSGLWYCPAYCFLRGGIRVFRCDRMHAVKVDTAGLAPLDLRHVHLGNREAYSHFQQGAEQEERKEPGQEADERPGRVPTNGKEQSRLHIELTQEGVQACEAELWSASLLHIREDGTGWLGGQVPRNDLRFFARFVIGLCNEAEVQEPPELAGRVRELLAGMLARYK
>NZ_CP048429.1|WP_062525280.1|2300700_2301960_-|MFS-transporter
MLKADSSLNSASSKRNYTLQLLTVFIGFLVFGFSENIKGPAIPRIQSDLRLDEMQLGTLLSLNSLGYLLACTFTALLIRKIGIKAVSLLSFGSMAISGVFIFLSHSYPALSGSFFLMYIGNGMLEIGLAVLGARIFVKNTGTMMNLSHFFYGLSSTVAPLISSGLMTVTLFGHMLDWRGVYLLILMLSVIPMIPAVLGKFPGDATLTEDRIPLSAISRDPVIWLLVAVLSFGVISELAVGGWLVNFLEKAYGWPSSSAAGMLSAFFLCFTLARLVLGPVTDKIGFALSLILFSAFSGICTFAAILWGESGAILFAIAGVGIAPIYPTIMALIADRYRQGSDTAITFIVTLMGVASVLGNYFIGAITEGIKQLFSGGQEDGTGLLRGLQAGYGFIGLCALLCSVSAYWLYRHLKVRGQLM
>NZ_CP048429.1|WP_082722740.1|2302026_2303562_-|glycosyltransferase
MIRRAEAFSYDYLFLIDSDLILHPDTLLHLIGTGRDIISEVFWTQWQPGTILQPQVWMHDEYNQWEAEPGEQLSREEINRRFHAFLAKLQVPGIYEVGGLGACTLISSRAIASGASYDRIRNISYWGEDRHFCIRAAALGIPLYVDTHYPALHLYRDSDLDKVPDFIRLTTVVEPDDPSRKAAIHERTAEDVQGSKAGSADKADAPGRTEANTVTVTAADAEEEQAAPSAAEDGTRPWTEAAARQRLSKDPLQQEETGGQKAGRAAAEFAAASTERGTSPRPKLTLTMVVKNEGQRFLRQVLQVHRKYIDEAVIIDDGSTDDTAEICREVLQGIPLHLVRNSVSKFSNESELRKQQWEEVVKSDPEWILCLDADEIFEDRFASDIDSLLREESCDLFCFRLYDFWDDRHYREDEYWRSHLRYRPFLLRYRKDFNFEWNDLPQHCGRLPENIFELPHLLSNLRLKHLGWSKAEYRLDKYLRYMLLDPDGQYGWKEQYRSILDPHPNLVPWTE
>NZ_CP048429.1|WP_062524893.1|2304147_2305764_+|ABC-transporter-substrate-binding-protein
MRRGLSGVIAIVLLTFLISACSGGNNAASPAASGTPAESQQPAAGEGPKDGGSLIIGVAADPVVLNPNYAGDRVSLTIDQALYAPLFQVNNGKKTFYLADSLTPSADNLTYTLKLKSGLTWHDGEKLTADDVVFTVEKILDEKQNSFLRANFLINDKPVTATKVDDLTVEFKLPQVSPAFEATLVQVTPIPKHIFENETDIEKSTKNAAPVGSGPFKFKEYKAGEYLTLERFDNYFGGKPHLDSVTYRIAKDTNAANLALQNGEINVQYLDPKDVSTIQATNNFEILPYAEGRLSYLMFNANSDTGALAKKEVRQALSLALSRDEIIQTAYTSGEYADPAKSFLTPDALYFTNDVPTYDNDPAKAKELLQSAGVSNLKLRFIVQSGNKAQEAISLYVQQKLKAIGVEVELQNMDSSAWVQKFIDLKSTDYELALTGYIMGYDPDAYRILFTSGASSNYSHYANPEVDKLLNEGAGEADTAKRAEIYKKAQELVAQDAPIYPIAYTKTVVAVSKNYGGLEEAVLKPVVIFEDLSKIYQK
>NZ_CP048429.1|WP_062524899.1|2305846_2306797_+|ABC-transporter-permease
MRQLIVRRLLQTLPMLFFVSVVCFTMIKLAPGDPVLSFVTPNMHADDIERIRHNLGLDKPAYIQYFIWLKEMAKGNFGYSLVNHQPVLGQILERLPATAGLMGSAIALAVMLAVPLGLIAGANRNRWADKLINFISYVGISIPLFWLAILLIYLFAIKLHLLPSMGMRTIGVESAADVLKHGILPCSVLAFGFLAGYVRYIRSSTIGQLKEEYVQIQYAFGSKKSTILFRHVMKHVLLPVITLLGMSMGDLVAGAIVTETVFSWPGIGSLGMTAVKGMDYPVIMGITLFSSLMLIFGNMAADILYSFVDPRIKLKG
>NZ_CP048429.1|WP_062524901.1|2306801_2307647_+|ABC-transporter-permease
MNRSKWKNVKDELFANGLGVAAVLILTVFTLGAVFAFLSGYDPNAMDAMARLTPPGAGHWFGTDDYGRDYLARALYGGRISLLVGFASMIVATGIGVTIGVISGYFGGWLDNLLMRMLDVVLSIPSFLILLLLSVYLKPSVGNIIIIIALLMWMNVARVVRAETMTIKEREYVLYAKASGQSASGIIWRHILPGLVPVIIVGATNNIASAIMMESSLSFLGFGVQPPNATWGSMLNSAQGYIAQAPYLALFPGLLILLTVLSFNVLGDILRVGFEPKLTRR
>NZ_CP048429.1|WP_062524903.1|2307663_2308680_+|ABC-transporter-ATP-binding-protein
MTKRLLSVENLQVSFATRDGENQAVRGVSFHIDAGETVGIVGESGSGKSVTAKAVMSLITPPGRITAGNIRFRGGSLTGLSEKEWRSLRGNRIAMVFQDPMTSLNPVKKIGQQLTEVIRRHRGLNKEAAFAEAAKLLRQVGIQQPEQRLKQYPHEFSGGMRQRVMIAMALSCQPELLIADEPTTALDATIQAQILDLFKELKENSETAIALITHDLGVVAQVCTRVIVMYGGLIMEEGTVEDIFYRPQHPYTQGLLRSIPKRGGGSRERLIPIEGTPPDLLDPPPGCPFMERCPHAFGRCSERPPVVEHAAGHRSMCWLAEGTQNQAAAYAEGRTSGE
>NZ_CP048429.1|WP_062524905.1|2308651_2309581_+|ABC-transporter-ATP-binding-protein
MPRGGLPVSESKVLVDVNNLQKHFSKGKDLRGRDTAVVKAVDGVSFQIRQGETFGLVGESGSGKSTVGRCLLRLYDYTGGEVFFDGQPLGKLGEKGLKPFRRRIQSIFQDPYSSLNPSLNVLELISEPMKIHGIYQGEERKEAAAALLERVGLKREHLYRFPHEFSGGQRQRISIARALSVRPEFVVCDEPISALDVSVQAQVVNMLEDLQSEFGLTYLFIAHDLSMVRHISDRIGVMYAGRLVEVADSDELYDNPLHPYTRALLSSILETDPRKGSQRIRLEGYSRASGADAQAVLREVSPGHYVAVD
>NZ_CP048429.1|WP_062524907.1|2309664_2310111_+|hypothetical-protein
MTETLDKVKLSQWDALLVESLRSLGWSDEELLRRVEAGELPVDESEYHFDYAQLTHLAGEQPEVFRQAVTQGYQIKYNTIRGIRSWIFVALGKEADLELEEGKEAAEVTLTEPEHDRLESVLSFGWRITGGPSGTDGTGVYRIEPIQR
>NZ_CP048429.1|WP_062524909.1|2310683_2311511_+|MBL-fold-metallo-hydrolase
MLKWKRGEITLFQSELYETNSLVIESAGHVLVVDPCWLPREVEEIRQYVSGILGGKRLLLLFTHSDFDHIIGYGAFPEAEIIASRGFADKSLEVRETILEEIRIFDDDYYLRRPYAIAYPAVDHIMEQDGQEMVFGELRLTGYMAPGHTNDGLFTVVDSPGVVIAGDYLSDVEFPYIYDSSTAYEATLDKVGQIIARHPVPLLIPGHGEAAESLLEIECRRAAGLGYIRRLRAAVAAGDQSAADQLITGCAFPRNMRKFHRSNQELMEQELYGTG
>NZ_CP048429.1|WP_062524912.1|2311735_2312575_-|SDR-family-oxidoreductase
MGKIICITGASSGIGLSSALKFAKEGWTVYAGTRNLERDQERYREVEHLKFVELEVTKPESIQRVIDQIEQEQGTLDVLFCNAGFGYLRALGQAPVEDIHRVFDTNVYGVMHTIRAGLPLLRKTGYGHIVATSSVGGLVGQPMNEIYCASKFALEGLLESMATYYKPQFNIDISLLEPGAIATEFNNTVLGHVSETGGVLDDEYKPVIEAYTQAFLERNVEPQSADSVAEVMWNLVHMEPKPLRIRTSEHAENFVSRKVSTDPTGLEGVLSTRKIQLNM

Crispr_ID: NZ_CP048429_13

• CRISPR_ID: NZ_CP048429_13
• CRISPR_location: 2333317-2333390
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_13

Consensus_repeat	Method
AATTAGTTACCCTTTTTCCACTT	CRISPRCasFinder

spacers of NZ_CP048429_13

>13.1|2333340|28|NZ_CP048429|CRISPRCasFinder
AACCTGCGGAGAATGGGGTACTCGGGCA

CRISPR arrays and Neighbor proteins around NZ_CP048429_13

CRISPR arrays

The CRISPR arrays of NZ_CP048429_13

>merge|NZ_CP048429|13|2333317-2333390|CRISPRCasFinder
AATTAGTTACCCTTTTTCCACTTAACCTGCGGAGAATGGGGTACTCGGGCAAATTAGTTGCCCTTTTTCCACTT

>NZ_CP048429|13|13|2333317-2333390|CRISPRCasFinder
AATTAGTTACCCTTTTTCCACTT	AACCTGCGGAGAATGGGGTACTCGGGCA
AATTAGTTGCCCTTTTTCCACTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062524966.1|2342652_2343468_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_074647913.1|2337858_2338026_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein	unknown	unknown	gnl|CDD|378175
NZ_CP048429.1|WP_062524935.1|2323912_2324689_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223673
NZ_CP048429.1|WP_062524947.1|2329688_2330732_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NZ_CP048429.1|WP_062524965.1|2341466_2342567_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NZ_CP048429.1|WP_062524945.1|2328787_2329588_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224098
NZ_CP048429.1|WP_062524949.1|2330956_2331838_+|PglZ-domain-containing-protein	unknown	unknown	gnl|CDD|224441
NZ_CP048429.1|WP_074647917.1|2333617_2335945_-|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl|CDD|223288
NZ_CP048429.1|WP_062524938.1|2324788_2325226_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP048429.1|WP_062524957.1|2336144_2336630_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524959.1|2338190_2339063_-|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl|CDD|319818
NZ_CP048429.1|WP_062524953.1|2332689_2332926_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524933.1|2323116_2323893_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224041
NZ_CP048429.1|WP_082722729.1|2336659_2337115_-|hypothetical-protein	unknown	unknown	gnl|CDD|373945
NZ_CP048429.1|WP_062524969.1|2343763_2346922_+|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|274362
NZ_CP048429.1|WP_062524962.1|2339330_2340572_+|DUF445-domain-containing-protein	unknown	unknown	gnl|CDD|377281
NZ_CP048429.1|WP_062524944.1|2327867_2328791_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226616
NZ_CP048429.1|WP_062524942.1|2326656_2327769_+|solute-binding-protein	unknown	unknown	gnl|CDD|270267
NZ_CP048429.1|WP_062524940.1|2325297_2326416_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|223489
NZ_CP048429.1|WP_020433554.1|2340935_2341262_-|P-II-family-nitrogen-regulator	unknown	unknown	gnl|CDD|198006

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_074647913.1|2337858_2338026_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein	gnl|CDD|378175	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein. Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure.	4.10175e-06
NZ_CP048429.1|WP_062524935.1|2323912_2324689_+|ABC-transporter-permease	gnl|CDD|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	8.12353e-62
NZ_CP048429.1|WP_062524947.1|2329688_2330732_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.92425e-132
NZ_CP048429.1|WP_062524965.1|2341466_2342567_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	8.60246e-70
NZ_CP048429.1|WP_062524945.1|2328787_2329588_+|ABC-transporter-permease-subunit	gnl|CDD|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.47971e-43
NZ_CP048429.1|WP_062524949.1|2330956_2331838_+|PglZ-domain-containing-protein	gnl|CDD|224441	COG1524, COG1524, Uncharacterized proteins of the AP superfamily [General function prediction only].	8.4167e-32
NZ_CP048429.1|WP_074647917.1|2333617_2335945_-|UvrD-helicase-domain-containing-protein	gnl|CDD|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	3.71471e-137
NZ_CP048429.1|WP_062524938.1|2324788_2325226_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.31641e-22
NZ_CP048429.1|WP_062524959.1|2338190_2339063_-|Cof-type-HAD-IIB-family-hydrolase	gnl|CDD|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.25471e-67
NZ_CP048429.1|WP_062524969.1|2343763_2346922_+|PAS-domain-S-box-protein	gnl|CDD|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	3.77158e-91
NZ_CP048429.1|WP_062524933.1|2323116_2323893_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	1.36585e-115
NZ_CP048429.1|WP_082722729.1|2336659_2337115_-|hypothetical-protein	gnl|CDD|373945	pfam15565, Imm30, Immunity protein 30. A predicted immunity protein with a mostly alpha-helical fold and a conserved DxG motif. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbor of the toxin gene, usually containing a domain of the Tox-SHH family of HNH/Endonuclease VII fold nucleases.	1.01491e-28
NZ_CP048429.1|WP_062524962.1|2339330_2340572_+|DUF445-domain-containing-protein	gnl|CDD|377281	pfam04286, DUF445, Protein of unknown function (DUF445). Predicted to be a membrane protein.	2.07589e-57
NZ_CP048429.1|WP_062524944.1|2327867_2328791_+|ABC-transporter-permease-subunit	gnl|CDD|226616	COG4132, COG4132, ABC-type uncharacterized transport system, permease component [General function prediction only].	2.18383e-82
NZ_CP048429.1|WP_062524942.1|2326656_2327769_+|solute-binding-protein	gnl|CDD|270267	cd13549, PBP2_Fbp_like_3, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. This periplasmic domain (Fbp) has high affinity for ferric iron and serves as the primary receptor for transport. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.35044e-58
NZ_CP048429.1|WP_062524940.1|2325297_2326416_+|alpha/beta-fold-hydrolase	gnl|CDD|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.1007e-11
NZ_CP048429.1|WP_020433554.1|2340935_2341262_-|P-II-family-nitrogen-regulator	gnl|CDD|198006	smart00938, P-II, Nitrogen regulatory protein P-II. P-II modulates the activity of glutamine synthetase.	5.9608e-34

Protein sequences

>NZ_CP048429.1|WP_062524953.1|2332689_2332926_+|hypothetical-protein
MEATAQEVAEWMVKEIRFTGTLYQTAAIEYVKANFGEQFVYVNENGNASLSKDVKKAFRKLHGGRIAWDRDGFLWAWT
>NZ_CP048429.1|WP_062524949.1|2330956_2331838_+|PglZ-domain-containing-protein
MTETASKLIVVVLDGLRYDAARKYLGYMEHLVEQGQLSCYKVQSELPSLSRPLYEVLLTGTPVSRNGITANHIARLSREQSVFHLAVAANLRTAAAAYHWVSELYSSVPFNPVSDRHQHNVLKPIQHGSFYFEDHYPDSHVFADAEYLRAAYDPHFLYIHTMNIDDAGHRYGGESKEYELAVRRVDGLLATLLPQWMEQGYTVLVTADHGMNVNGCHGGVTPAERHVPLYAFGEKVLSPEQEIQALPQLRLAPLMCHCLGIQPSAAMTTEGLPPMVPPAPQPQEEVTALQQLR
>NZ_CP048429.1|WP_062524947.1|2329688_2330732_+|ABC-transporter-ATP-binding-protein
MNDYLKLQGIRKRFGDAPVLAGVDLNIGEGELVTLLGPSGCGKSTLLRCIAGLTELDSGSILLAGKELTKLPPRSRDVGMVFQSYALFPNLTVSQNVEYGMRMRGVAPAARRSRCEELLALVDLEDKRDVYPQSLSGGQQQRVALARSLAVQPKLLLLDEPLSALDAKIRKNLRAEIRDIQRRLGMTTLFVTHDQEEALILSDRICIMNQGRMVQEGSPEQLYTAPRTEFAARFMGSYNVFNRAEALKLFRRIDSRADRFAIRPEAVTLLAEGEAIQDDADGMMDVHGQVQAVSILGNIIRAAVVAEGVHLTVDLLNDGRWLRVREGDRVTLLLDPAQLLHLEQEGA
>NZ_CP048429.1|WP_062524945.1|2328787_2329588_+|ABC-transporter-permease-subunit
MNTRKAGIAPRTFMLLLMVYLLLPLLATGLYAFAQDWQNTLLPRSWTLGWFRDMFQDIRFLEALWTSLYLCVISVLLSLAVMLPAVFVITVYFPRWESFMKGVVVLPYAVPGVVAAVGLIRAYSSGPFDISGTAYLLVGAYFVVILPYMYQGIRNSLLSVSAVELLNAAELLGARRRSAFVNVILPNIWPGVMVSALLSFSVLFGEFVLTNMLVGGHIQTIQVYLFRRVGESGHLASAIAISYFVFILLLSAVLMKLGMKIKGQAK
>NZ_CP048429.1|WP_062524944.1|2327867_2328791_+|ABC-transporter-permease-subunit
MKQRERGLILALAPFVLMVLAFQVVPVFSMLTGSFRDADGAGFTLGNYQHALSSAYYQQAIKNSLLISALSSLIGLAVGLVCAYCITRFAPAVRDRLLMLSNMTSNFAGVPLAFAYIILLGNNGVFTLLFKQWGWNVFDGFNLYSWSGLILVYVYFQIPLALLLLYPAFYGIREQWKEAAALLGAGTWQFWRTVGLPMLSPAIFGTLGILFANAMGAYATAYALVGGNYNLLAVRIGSLVAGDVVTQPQMGSTLAVLLALSTLLAVFLNQRMVRRMEGFGGRSPAGRERSSGLFRRRWPAVREEAGQ
>NZ_CP048429.1|WP_062524942.1|2326656_2327769_+|solute-binding-protein
MKKRFTQFLSMGLLLSLLVLLLTACADSEAKADEGNGNAPAKELNLSEIEAEATKEGAVVSVGMPDSWANWKDTWNDITSKYEITHTDTDMSSAEEIAKFEAEKDKPTADIGDVGIAFGPVAVDKGVTLPYKTSYWDEIPAWAKDKDGHWVVGYQGSIAFLTNTKLVADPPKSWEDLKNGSYKIIVGDVTKAAQSQMAILAAAIAFGGDESNIEPGIAFFEDLAKKGRLSNAEASLANIEKGEVEVTLLWDFNALNYKDQIDKNGFDVAIPQEGSVVSGYATVINKWAPHPNAAKLTREYILSDEGQINLAKGYARPIRDSVKLPEDVAAKLLPQEEYANVKPVGDYKVWEETAKSLPQLWQERVLVHLN
>NZ_CP048429.1|WP_062524940.1|2325297_2326416_+|alpha/beta-fold-hydrolase
MTELTVKERFAFRFIFNEKRVYQRWYGRFLLFGTDYGRLRRVVARIGDWRKWCEVWTAEGDEVYRTAERALAQGSQGKARALFHEAVACYHAGQHIFFIDSRQKEATQEKARESYTRALSLYNETEKPVRVDIPYRGVSIPGYLRKADTEGRPLIIFVNGMDNIKEAEGHHFGSVFNRQGFNFFTFDGPGQGEMWSSLKFDARDYHTAVSAVIDWFEQQPPCGIDLGRIGLVGFSLGGYLAPEAAARDSRVKCTAGNSGLVYIGGIRGLKQLNPIWQRGVTYITGCETLEEALPQFNYDIEDAPALRSPLLFFHAGRDEVMPSPKRHADKMVSWAKGETTLKYMEDAEHCTMNYLDEVFPEILDWFMRELRM
>NZ_CP048429.1|WP_062524938.1|2324788_2325226_+|MarR-family-transcriptional-regulator
MPNGFDYTELIGFQIIKGEVLVKRRMLAIFMEKGYDLTFEQWTVLNVLYAEPGIIQSEIAARTFKDKTNVTRILDVLAKKGYVAREAHGKDRRSFQIYLTAAGQEMFADLIPHVQQLNEQFKQDIPDEEMAQFIHTLEKICRNAQ
>NZ_CP048429.1|WP_062524935.1|2323912_2324689_+|ABC-transporter-permease
MKWVEKKWVSVSLLWLAAFCIWQLGALLYGPDVIPGPWATLKGGRELIEDGTLIQYIGISFYRVFVGWVLGSLLAVPAGLIIGKVNAIRIFAEPFLNFIRFIPPIAFITLFLVWFGIGEQSKIALIMYATFFIVVLNTLTGVMSVEEDKIRSARSMGANEWQILLHVIVPATIPYIFTGVRLAMGTSYMAIIGAEMIASNEGVGYLIWNSRLFFRTDWIFVGLFCLGFMGFATDRLFGWFGRKALYRYGVVSVAARRR
>NZ_CP048429.1|WP_062524933.1|2323116_2323893_+|ABC-transporter-ATP-binding-protein
MSLPAKQNAIHIEQLRKSYSEPAAGDVHYIIKDVNLVIRGGEFFVLLGPSGCGKSTLLNMIAGFVSKSGGNLRVDNVEVDKPGRDRAVVFQQADSSLFPWLTVRENVEFGLRMKKTPRAERRAISDRYIGLVGLNGHEDKFPKELSGGMKQRVQLARVLANDPAILLMDEPFGALDAMTRRTMQKELVHIWRETHKTVIFVTHDIQEALLLGGRIGIMSVGPSSNITDIYDNALPFPRDVASPEFYALYNQIQSHFEE
>NZ_CP048429.1|WP_074647917.1|2333617_2335945_-|UvrD-helicase-domain-containing-protein
MNKLLFHNIPLGASGERIPQAKTASARTSREMVKPGDSDAAYFRRLEEGGILLNSPQIAAVRHHLGPLLTLAGAGSGKTSVLICRTGYLLSVRGISPSQLLLLTFSNKAAAEMRERIALLPGVRESDAARLQARTFHSFFLYFLRRQGLQQEIFNETRRQHILLKQIMRELGLPKDAYPPETLLALLSTCKMNLGEPEKLPETSTAEKEMKAVLLLYEQWKTDNFKIDFDDVLLIAYRMLREKPALLLELQMRFLYVMVDEFQDTNALQYELVKMIAHPQHNLMVVGDDDQTIYSFNGARSEFILEFEKLYPGARVITLDINYRSGPAIVGLGNGIIRHNMRRRPKTLQAAQGSGRQPRYLRPQTADEEAEQIVEHILNEVASGARAYSDFALLYRASSSNRALLERLLLRDVPYVDYGEGQLLYEHWLISPVLDHLRLSLNRRNFAAMENILPTLYLNREKGMNHIRRMEAVQPKQGPLIHLLSLPGMEDFKSGKLRERLELIRGLIRLTPVQAIRQIRSSFYDYFIEANDRHQATLHREMLKEMLDELEASAERFDSLPVFLEFIGNVTERNELSRQPGLKEQGNRVALMTIHKSKGLEFPVVFLIGASEGILPHSSALEGERLKDRKTSPPPGARDSKVIVGNTAGPAALEEERRLAYVAVTRAREELFISSPARHRGKKAEVSRFMLSAFRSAVPAAPAPAAANRTPAAVRHTSARSSGGRTHTVPVWKCTGSSCPGWTRMKAGGAEDHLSSKPCPLCSSPMEKSMREVPV
>NZ_CP048429.1|WP_062524957.1|2336144_2336630_+|hypothetical-protein
MKPIARTRKLAVQRNRSVPRTGSPRTLLYRNSKYGFSIRLPRRWKCYTVVRRSSRLDDAEYAVYFLFKYKGKIYESALTLLVYRMTLKKWIEEGYDESPIIRLAVRNGRIYAYALPSELPEEFLNAKGDDYDYKRYGRPIRILSSMVNDDVPKIVKTFKLR
>NZ_CP048429.1|WP_082722729.1|2336659_2337115_-|hypothetical-protein
MNMYPGIAQLYHNRLLRTELECEAFDLALEGLAGDTEDAVIHQIFNVFDDDTEQEDVMFGLVHFVESYQMEMYLTQLLESLPDMLENARNWAIVLNQRILEDDLCRREYADIAAGMTPRIKRSLAFLLEEIKEDNPRLYERKVNAILGQLK
>NZ_CP048429.1|WP_074647913.1|2337858_2338026_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein
MHNNEKMVLLHVESAREKLYQALKKYGFLTHPKVIEQSVALDHLLNQYSSQKTVC
>NZ_CP048429.1|WP_062524959.1|2338190_2339063_-|Cof-type-HAD-IIB-family-hydrolase
MLIALDMDGTLLNGEGKISPENREAIVHAQSLGHIVIIATGRSYMDAERQLRLVDLECPVVSLNGAVVTLPDRTLAASKPLNKEDIIPALRWMSEIPELYYEVYTEDNVYVELDKRVRLEKLSELNDEDVPGELRWLLKAMIAEQFQQASVTYVESMEEIWSKDEYVIYKTLAFSLNRELLKEASTRFAAIPGLIITASHVNNIEINHKDANKGSGVGMLAAHYGIPAEQVAVMGDSYNDLPMFEMAGYRIAMENAAPILKETADFVTGNHAENGVAEGLRHLLEKREGQ
>NZ_CP048429.1|WP_062524962.1|2339330_2340572_+|DUF445-domain-containing-protein
MKSRNLATISLAIMACGFLITLFLPENLAVVLLRGGFEAGLVGGIADWFAVTALFRHPLGLPIPHTSLLLKNRDKIIQSLISAMENELLNKASIENKLRKIRIVSLGSTMLTRLFARKKARAEMLEQVSAFVQKLPVEQAVPYIQSAAAGYIREAKLGTAVDTIVTKLMNDGKDVAALDFALEGISGWVERPETRAMLGKIASEKLAEVKLGGLKGMAFQAFVGFVDAEMLGGMLQGMVQSGINDFRSEDSPYREEIIREIRVAIFQTVNDEARIAAIKEWGLNELQSEAAASFLREQLEHFRGRAVAWLEEERSAGGRKLFGLYAMLARRIGKEQQWIQEWEERIRASLISFVEANHYRVGLLVKENLDLMDDASLVNMLEDKVGKDLQWIRVNGAVCGFVVGLVLTVIQLF
>NZ_CP048429.1|WP_020433554.1|2340935_2341262_-|P-II-family-nitrogen-regulator
MLMIKAIVRPEKADAVMAELLLAGFPSISKMDLLGRGKQKGIQVGTNHYNQISKKLLMIVINDDEKEDVISIIMRTARTGEQGSFGDGKIFVLPVQEAYTISNGKSQL
>NZ_CP048429.1|WP_062524965.1|2341466_2342567_-|glycosyltransferase-family-4-protein
MHICMIAPEQYPVPGDGSVEICIWAIARKLARRHKVTIVSRKAPGLPDTDEQEQVRIVRLVSGTPARYLASVLDYLETEHFDVIQVDNRPLLMSSVKRRHPYTPVILFLHSLTFVPAESRIARSLARANLIAVNSRSLQRRLARRFPGLGGIIRVVPLGADLSRFSPAELPEKQQMRRLYRLSPVFTVLFVGRVIPRKGVPVLIRAMRLLHKRLPAQLIIAGHGKPPYIRQLKAMARRLGVRAVFIGRIAHEDIHDLYHAADVFVCPSQRHESFGLVNVEAMASGLPVIASNNGGIREIIVSGHNGYLVQRYREASPFAKALLQLGREPQLAARIGLQGRRDALQNFGWQHTAAALEELYRFLLLN
>NZ_CP048429.1|WP_062524966.1|2342652_2343468_-|hypothetical-protein
MTTLKNSVLTLLSLLLLMLPLAGKAAASGTELTPSIQAAFDLTAAVADSSSRSQLNSQYSELSVLSAQYNSREEQIRKLHESNAQSLLTVKEKIKNIDQDTVARLTAAAASTKARYQPLFDQYSALNKRISLLRGMRDKSLNSVLRAQSDAMKILVQMARQDIRDQEARLKAAKEARAKKIAAARKTLAGIDSPQTSIKSQKSVISSLNKRLSADWSDFKSAIRKQNPSLTSLSLNSLLSGHRQIAASKQRIIELEQKIAGVITAASKQIT
>NZ_CP048429.1|WP_062524969.1|2343763_2346922_+|PAS-domain-S-box-protein
MDENNRELLDYAFLMSPLGTGVLSPEGKWLKVNPAFCHTIGCSEQEFLAGGLLHNTVAQQEEIQQMDIDLIIGELDSSAERSLVKEKKLLTRSGRTVWLLLTCVKAPAGQAGSHIIVYAQDITDRKIADQLTVDSRDLYDLFIKDDQTMISFTLPDGTLSFISPSSQLQIGFAPEEMVGRNRLEFYHPDDIEGMDQSQGLLESKTYIRRLRHKDGHYLWFETSFHVIHDENNEIVRIMGIGRNVTSRKQNEEALAAAQRVAKIGSWVWDLSKGTLVFSEELQRMLHYSTGTDVKYETFLSLVHPDDLELLKAEVERAVKKGESGESAYRLVLPDTALLTVHIQWDVMRGPDGKPVQLIGMMQDITERRQMEQQLRESEQRYKSLFEYNPSAVYSMNLNGEYLTANANLEELTGYTLDELIGMYFGPIVHEKDIEKTLHHFRLASQGEPQSYDLTLIHKDGHLVEINTLNIPIIVDRQVVGVYGISRDITERIRYTEQIEKLSNEYTLILNAVSEGIFGLDTEGRITFINPAGAYMLGFEQDEIMGRSYLNHIRQTASDAVHYRTEASPLLRVIQAGESQRSMDAVLWRKDGSSFLAEYQATPLFDKGERKGAVVVFRDITDEQEIIRAKESAEKADQAKSEFLAVMSHELRTPMNGIIGMTDLLAETDLNEEQRGYAEIISQSSSSLLYILNEILDFSKIEAGKMTLMHELVSVESVMGIVTELFSPKAKEKNVLLSSRIAEDVPELIMGDADRLRQILVNLVSNAVKFTEEGQVSIGVETEFCPNAKKFSLKFSVQDTGIGIPSEKQPLLFQSFSQLHPSINRKYGGTGLGLAICKRLVELMGGAIGMESVEGKGSNFYFTLPIVSGREWEENGAEDHEPPQVLNTPDSGANTAACAGGKHLEQVGGGGLLPAGELPPGLPEAKYGPLRILVAEDHPVNQKLILTMLEKRGYRADLAENGQQALQAVLGQPYDLVFMDVQMPVMSGLTAAARIREQAPVSHQPFIVAVTAYARPEDRERCLAAGMEDFMSKPFLSSDIERILRERMEKISL

Crispr_ID: NZ_CP048429_14

• CRISPR_ID: NZ_CP048429_14
• CRISPR_location: 2439950-2440023
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NZ_CP048429_14

Consensus_repeat	Method
ATTAGTGATCCTTTTTCCACCTA	CRISPRCasFinder

spacers of NZ_CP048429_14

>14.1|2439973|28|NZ_CP048429|CRISPRCasFinder
ACTCCCATCTAGGGGGCGGGCGAGAGGA

CRISPR arrays and Neighbor proteins around NZ_CP048429_14

CRISPR arrays

The CRISPR arrays of NZ_CP048429_14

>merge|NZ_CP048429|14|2439950-2440023|CRISPRCasFinder
ATTAGTGATCCTTTTTCCACCTAACTCCCATCTAGGGGGCGGGCGAGAGGAATTAGTGATCCTTTTTCCAACTA

>NZ_CP048429|14|14|2439950-2440023|CRISPRCasFinder
ATTAGTGATCCTTTTTCCACCTA	ACTCCCATCTAGGGGGCGGGCGAGAGGA
ATTAGTGATCCTTTTTCCAACTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_082722742.1|2442983_2445011_+|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl|CDD|223910
NZ_CP048429.1|WP_062525094.1|2434045_2435476_+|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP048429.1|WP_062525096.1|2436446_2437163_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226663
NZ_CP048429.1|WP_062525108.1|2447586_2448642_+|lactonase-family-protein	unknown	unknown	gnl|CDD|378416
NZ_CP048429.1|WP_062525104.1|2445093_2446056_-|L-lactate-dehydrogenase	unknown	unknown	gnl|CDD|133427
NZ_CP048429.1|WP_025705626.1|2438045_2438411_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|238042
NZ_CP048429.1|WP_039838979.1|2433374_2434049_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP048429.1|WP_062525106.1|2446336_2446843_-|cytochrome-c-biogenesis-protein-CcdC	unknown	unknown	gnl|CDD|377808
NZ_CP048429.1|WP_062525306.1|2451934_2453047_+|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|224529
NZ_CP048429.1|WP_082722734.1|2438500_2439556_-|cation-transporter	unknown	unknown	gnl|CDD|224151
NZ_CP048429.1|WP_082722735.1|2449170_2451501_-|hypothetical-protein	unknown	unknown	gnl|CDD|372282
NZ_CP048429.1|WP_062525301.1|2435535_2436450_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213235
NZ_CP048429.1|WP_062525114.1|2454241_2455105_+|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl|CDD|226665
NZ_CP048429.1|WP_062525112.1|2453159_2453999_+|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl|CDD|131194
NZ_CP048429.1|WP_062525091.1|2430238_2431699_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_082722733.1|2431961_2432402_+|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl|CDD|226389
NZ_CP048429.1|WP_062525102.1|2440472_2442797_+|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319847
NZ_CP048429.1|WP_074647900.1|2428525_2430211_+|response-regulator	unknown	unknown	gnl|CDD|274362
NZ_CP048429.1|WP_062525098.1|2437165_2437906_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226663
NZ_CP048429.1|WP_020426595.1|2447052_2447313_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP048429.1|WP_025705626.1|2438045_2438411_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	2.3e-22	74.3	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_082722742.1|2442983_2445011_+|methyl-accepting-chemotaxis-protein	gnl|CDD|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.40853e-61
NZ_CP048429.1|WP_062525094.1|2434045_2435476_+|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.11452e-32
NZ_CP048429.1|WP_062525096.1|2436446_2437163_+|ABC-transporter-permease-subunit	gnl|CDD|226663	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown].	8.25425e-19
NZ_CP048429.1|WP_062525108.1|2447586_2448642_+|lactonase-family-protein	gnl|CDD|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	1.22553e-137
NZ_CP048429.1|WP_062525104.1|2445093_2446056_-|L-lactate-dehydrogenase	gnl|CDD|133427	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	4.23084e-166
NZ_CP048429.1|WP_025705626.1|2438045_2438411_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.66493e-20
NZ_CP048429.1|WP_039838979.1|2433374_2434049_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.03013e-67
NZ_CP048429.1|WP_062525106.1|2446336_2446843_-|cytochrome-c-biogenesis-protein-CcdC	gnl|CDD|377808	pfam07301, DUF1453, Protein of unknown function (DUF1453). This family consists of several hypothetical bacterial proteins of around 150 residues in length. The function of this family is unknown. Members of this family seem to be found exclusively in the Order Bacillales.	2.53043e-58
NZ_CP048429.1|WP_062525306.1|2451934_2453047_+|sulfate-ABC-transporter-substrate-binding-protein	gnl|CDD|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
NZ_CP048429.1|WP_082722734.1|2438500_2439556_-|cation-transporter	gnl|CDD|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	2.2418e-102
NZ_CP048429.1|WP_082722735.1|2449170_2451501_-|hypothetical-protein	gnl|CDD|372282	pfam12740, Chlorophyllase2, Chlorophyllase enzyme. This family consists of several chlorophyllase and chlorophyllase-2 (EC:3.1.1.14) enzymes. Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll (Chl) degradation and catalyzes the hydrolysis of an ester bond to yield chlorophyllide and phytol. The family includes both plant and Amphioxus members.	2.557e-05
NZ_CP048429.1|WP_062525301.1|2435535_2436450_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	3.42871e-96
NZ_CP048429.1|WP_062525114.1|2454241_2455105_+|sulfate-ABC-transporter-permease-subunit-CysW	gnl|CDD|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	7.26935e-149
NZ_CP048429.1|WP_062525112.1|2453159_2453999_+|sulfate-ABC-transporter-permease-subunit-CysT	gnl|CDD|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	3.2194e-140
NZ_CP048429.1|WP_082722733.1|2431961_2432402_+|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl|CDD|226389	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only].	4.10704e-30
NZ_CP048429.1|WP_062525102.1|2440472_2442797_+|cadmium-translocating-P-type-ATPase	gnl|CDD|319847	cd07548, P-type_ATPase-Cd_Zn_Co_like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis CadA which appears to transport cadmium, zinc and cobalt but not copper out of the cell. Bacillus subtilis CadA/YvgW appears to transport cadmium, zinc and cobalt but not copper, out of the cell. Functions in metal ion resistance and cellular metal ion homeostasis. CadA/YvgW is also important for sporulation in B. subtilis, the significant specific expression of the cadA/yvgW gene during the late stage of sporulation, is controlled by forespore-specific sigma factor, sigma G, and mother cell-specific sigma factor, sigma E. This subfamily also includes Helicobacter pylori CadA an essential resistance pump with ion specificity towards Cd(2+), Zn(2+) and Co(2+), and Zn-transporting ATPase, ZiaA(N) in Synechocystis PCC 6803. Transcription of ziaA is induced by Zn under the control of the Zn responsive repressor ZiaR. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP048429.1|WP_074647900.1|2428525_2430211_+|response-regulator	gnl|CDD|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	3.42323e-87
NZ_CP048429.1|WP_062525098.1|2437165_2437906_+|ABC-transporter-permease-subunit	gnl|CDD|226663	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown].	9.12069e-29
NZ_CP048429.1|WP_020426595.1|2447052_2447313_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	8.09983e-11

Protein sequences

>NZ_CP048429.1|WP_082722734.1|2438500_2439556_-|cation-transporter
MNNHSHQGHTHEHNEHQEHYEHHDHNQHQEHHEHNDKQKHVHNDRHGHSHSGHSHSGHSHSHAPNNKKGLLIALIITGGIMFLEFFGGLVTGSLALLSDSGHMLSDTASLALSLVAMIFAVKPPSLKNSYGYYRFEIMAALFNGVTLFVIAGFIIWEAWQRFFEPPAVASGTMMIIAAVGLLANLISAWSLMRKSDTKDNINIRSAYLHIMGDALGSVGALLAGLIMNLFSWYVADPIISVLVALLILRGAWGVLKQAFHILMEGTPVSVNTNDIKEALLKIDGVEDVHDLHVWTITSGLDALSGHLLIKDHADPHSILQQAIIVVEENFAIQHTTLQIENSSLKHGELRV
>NZ_CP048429.1|WP_025705626.1|2438045_2438411_+|winged-helix-turn-helix-transcriptional-regulator
MEPAALEECDNTCNGSELEPESMALILPDRGTTDKMAEMFKALGDPTRVRMIYALSQRELCVHDLSSILDMGQSAVSHQLRYLRNLRIVKRRKEGKTVYYSLNDAHVEQIFLQTHEHIRHE
>NZ_CP048429.1|WP_062525098.1|2437165_2437906_+|ABC-transporter-permease-subunit
MGIFWRVLSAERLKMSKSFVWLLVIGSPAVAMLIGALANMEEEGQMITWEVLLSVMSLFHAMFFLPVLSGVFAALICRAEHADGGWKQLLALPVTRTSVYLAKYTMIMALLAAVQLLFFAAVLGVGALRGVDVPIPWTMFLASIFGGWLACMPLAALQLAISQSWSSFGAPLALNVTLTMPNMLIANSSTYGPYDPWLQPMLAMSPFGEDRFGAFNLPLESLITVVLGSLILFLAVGLFSFRRKAV
>NZ_CP048429.1|WP_062525096.1|2436446_2437163_+|ABC-transporter-permease-subunit
MMWRSLSADWLKIRGKGLWFLVFLGPVGLLAMQGLNFGMRYDYLTGQYQSDLWGGLLSNLADFVPVALYLGGTLVCSLLANVEHQMSSWKQLLALPISRTSVFMAKLLICLLLVAVSCALLSAGTVALGLLLGFGTQPVPYADVLRIGFASYAAALPVIALQLWLSLSSRNQTLPVSLGLILSLLSLFSTFLSEWVPLSWPALAWSTSRPWLFSGAGLLLGLLVLLPGAVHFARKDVN
>NZ_CP048429.1|WP_062525301.1|2435535_2436450_+|ABC-transporter-ATP-binding-protein
MTQAVIETTNLLKEYRGRAAVEHLNLNIGKGEIYGFLGPNGAGKTTTIRMLLGLIKPTSGSIKIFGQDLKRNKLQILRKVGSLVESPSYYGHLSALDNLEAIRRILNVPKSRIAEVLDIVSLTGEEKRPVKGFSLGMKQRLGIAAALLGSPELLILDEPTNGLDPSGIQEIRSLIKRLPVEEGITVLVSSHLLSEIEQMAGTVGIIRSGRMVYQDTIAHLQQQAAGDLRLAVSEPEEALILANRRGCGGTLQEGRITLPRMSDVRVALLIKELVENGHAIYRVEEHRQSLEEFFLQVVEGGQSV
>NZ_CP048429.1|WP_062525094.1|2434045_2435476_+|HAMP-domain-containing-histidine-kinase
MRQPGFFRKLHASLLSRYLLIIMTALLFIPAVLVIIPLTLNMAQEDVPKEYEKYQDIKELEKIWHKEAAGLLGSSPERINNRLKALSSAYSLAAMFWVDGEGRTRLSLESADPRLWQQNERRPIPPVWTAAQAISFMKKSMAYNPKPMNIVAFVGDRAEAGEGFMVMQIPDAIIERHYFDGMSLRFTLVMFVLFTGFMVVSLLFFIQIRKRLLRLETAMAFTGEDGVPQLIDPGKPDEIGRLETAFNTMVTELAASRAREAEEEGLRKRLVSDLSHDLRTPLTVIRSHLHILGKEQLTGRGQESLKLMDERIESLGVLIENLLSYNLLSSGRMTLKPERKDVLRLLRESAAAWYPLWEKEGFQIEIDLEGEPLHWNVDESWFRRILDNLFQNIVRHARSGLYVGVAVEDREGERVIVIRDHGQGLGSGSESKGAGLGLSIVDLLLKRMELGWKVDSTKQGTTIVILSLPHGNLNKI
>NZ_CP048429.1|WP_039838979.1|2433374_2434049_+|response-regulator-transcription-factor
MSVTLLYIEDDREIGSAVSADLREREYAVRWLESGEGAVEAAAGCQLVILDVMLPGLDGFTVGQRLKRAYPNLPVLMLSARTSIDDKLQGLEFADDYLTKPFHPDELAARIEVLLRRTGAVLSIPLKLKHLMVYEGDNRIIEAASGKEILLTGKQFQIFSYLLRHLGQILTKEQIYEAVWGESYIEGDKTLMVHIRYLREKLELDPAAPEIIETVRGIGYRVRA
>NZ_CP048429.1|WP_082722733.1|2431961_2432402_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MDNRELEQTIIKTLDDNKFGSFGTIEAGNKPKVRYMAVFHEGLQIYLATNRKTHKVEELRDNPNAFLLLGYEQGGGKDVLEIEATVAVTKDESLRSKVWNKELEKWFKGPDDPDYVILELQPTRIEYMGKDQQHGVWQGSAAVSGK
>NZ_CP048429.1|WP_062525091.1|2430238_2431699_-|hypothetical-protein
MPELNPADAEPTLHTALLQFIFPFSLKEGEDMNLIRQLTQDGFTRFFLSNKELEDAYYGEGYCVSHEKMERSYLPFAAHVLFPREKDRDSFRRFSRANNLSCRLDMPAQSVHFQVLSTDVFICPFELGFLTIRIRIEEEMLPFSVALEFADRFRTLEDVSYQDKQTTIHCHDRTFEQVEDFVFRHLARGLEPFLDPSEINGAYFETLPFFVDERMLVQAFYGFDRREDTGGISEALRYRASQLDGLTPEGKPHISASDPGYIEDYCREHSYSRWGPETYYMTNEQTFCCLSRAEPGLATQLVNQMYGEYYYGLLLSIFHKIVLLKLANMHSRLRINHDYDEIEKLIFLINKFSAKFYFLELISQSQGREIFFQLRKVYGNDALFEEVKMTLNDLFQYQDKFQAKRRDTLLMILTVFTVVSGIYGMNQVIEDLKGKIEWSKMLEYSPFEYLALFVALTGIAVSIGLSLKQLWSGIRSRRRKRYQGHD
>NZ_CP048429.1|WP_074647900.1|2428525_2430211_+|response-regulator
MADHEQEVRKLRETIEQLSHQVIQGQHREEQTLAEFSAMNNELITMHRLLAKNSAGLKEMKEEAEEANRAKSLFLATISHEIRTPMNGILGMTELLEAEGATDGQRAHLEVIRESAQYLLQMINNLLDISKIEASRMELEKTPLNLRDLLEHVARLLSTAAAKRGNVLKWQIADRVDHTLSGDSSKILQVLINLVGNGLKFTQNGEVEMIVSLLREDAARQHLCFEVRDEGIGISLQDQAALFRPYSQISSELAMAGEGTGLGLSICKSMVELMGGTITVDSAPGRGSTFRFEIALDKTLSLKESSPEGEAVLPEPRFSTQPVLVAEDNGLNSTLLLLQLKKLGIMDVRLVSSGKEAIEAWQQGEYGLILMDSGLPGMNGGEAVRRIRQLESSGTRPRIPIIGVTGDGSEESRAQFFQAGLDDWAVKPLNLERLRQLLDRWFSPEAYIPVLDEDMISGIREMDGEEAPQLLQALVEMFKNDTPLRLAALEAAFAARDLPEMAAAAHGLKSGSLSIGAQYFAHLCAAVERHAREGEYEPAALVLPKLAPAYAEACRELESLL
>NZ_CP048429.1|WP_062525102.1|2440472_2442797_+|cadmium-translocating-P-type-ATPase
MNVVQGNVRRQWMLEGLDCANCAMKIENKVKKIEGVTSCSVNFTMKMMTLETAAADAEAVSAEARRTVNILEPHVKVKEVKPAGLRRNPQPGASPQHGHSREAHAHADAHGHSREAHAHADAHGHSHEAHTHADAHGHSREAHAHADAHGHSHEHGEGDTRRILLRLGAGGILAAAGMFLPVSGILELLVFLAAYLIVGGEVVWSAARNIVRGQVFDENFLMALATIGAFAIGEYPEGVAVMLFYQIGELFQGMAVNRSRRSITALMDIRPEFANLKEAGNLRRVAPDEVGIGDHIVVKPGEKVPLDGTILEGSAMMDTSALTGESVPRAAEPGSKVLSGFINRNGVVTIEVTETFGESAVSKILELVQNASNNKAKTENFITKFARGYTPVVVTTALLLAVIPPLVLSGATFSDWIYRALVFLVISCPCALVVSIPLGFFGGIGAASKSGILVKGSNFLEALNDVKVVVFDKTGTLTKGEFKVTGTYPSEGFKENDLLRTAAYAESHSSHPIAESIRAAYGQEIPGDVIADYNEISGHGIAVMVEGKAVLAGNARLMEREGIASRTPEQNGTVVHIAIDQQYAGYLVIADEVKEDSLQAVQALGRLGIHRTVMLTGDASPVAEAVGQQLGIEEVHAELLPQHKVEAIEKLEREKSQREKIIFVGDGINDTPVLARADVGIAMGGLGSDAAIEAADIVIMTDEPSKIATAVSIAKRTRTIVWQNIIFALAVKALFLLLGAFGIATMWEAVFSDVGVTVLAVLNSVRALQVPKSV
>NZ_CP048429.1|WP_082722742.1|2442983_2445011_+|methyl-accepting-chemotaxis-protein
MDKTDVPEKMKMKAKERKSASVQTKWSLVILAIAIVPLLGTTIFFMQYFGGVTRSNSEELATKILEMNTSRIDEWLKSRTSAVQELIAQHPEFDTAQPQSIFPVVKILEESDKQSEGYSVINKEGLLTNTMNLTADMAKSAYFLKAKESLAPAVGDMSYLEPLKKYIIPLIVPVVDKKQQFSGAIAFSVTPDILNEMSKSIHVAESGYGYVVSGKGDYYAYSDMSRIGKNMADYAKEPELKKAVTAMLSRESGSETYRGEDGKTIITYYKTIPGTDWKLMINVPKSEIFAKVNAAQRLATLLIIGTILLVTLISLYLTRMAVKPLVAISGVMKRVAEGYLSERVEVRSGDEIGQMSKSINDTVSSLSGIVGTIDATVLQVAAAAEGLLEYANHSSNTSAEIATVIQEVAHGMEEQFKGSEQSARATEEMAVGLQRIAESSVSVSDQAEAVSTEVQNGYLEIQSTLEQMTVITTTAGQTADLIQTLTQQSEHIGQIIDVISEIANQTGLLSLNASIEAARAGEHGRGFGVVANEVKKLAERTNASIVDIVELIKQIQTSTTNAAQSMEKSIAEIGDGMGKMKNVGSSFEHIRSSIREVSMQIQDVSAINEEMSAGTEEITASVSDMLTIAKDSAENAQAVSHASSEQMELMKKVVSSAQSLNEMMSALKGEIEKFR
>NZ_CP048429.1|WP_062525104.1|2445093_2446056_-|L-lactate-dehydrogenase
MKSKSRKVAIVGSGMVGSSCAYSMVNQAICDEIMMIDRTYDRAMAQALDLSHCMDFTGTRTKVYAGTSSDCAGMDVVILTAGANPKPGQSRLDVLDAAAVITKDIVTEIMAGGFDGIFVIAANPVDIVTYMVWKISGLPRHRVIGTGTSIDSSRLKTLLSEVFTIDPRSVNGYALGEHGESQFVAWSHVTIGGKPILQIIEQHRERFSTLDLEDIARKTKDAGWEIFTRKGSTHFGIGSALAYITRSILNDEHKIIAVSAILDGEYGQSGVCAGAPAIIGRGGIQELLELNLSAEESKKLEASCSIIRRGIESLHLEEKV
>NZ_CP048429.1|WP_062525106.1|2446336_2446843_-|cytochrome-c-biogenesis-protein-CcdC
MGNINPSLLHVGSTLGAVFMALMVIFIRLKASARPVTIRKIWIPPLGMSTGFAMFVVPEVRFPWWWAVAAFLVGWFIFAYPLIRSTKFEAREGLVYARRSKSFAFILLGLLLIRTVLHEFINQYVSIPQSGGLFFILAFGMILHWRVFMYKRYIRMVPPQTPIPEPRG
>NZ_CP048429.1|WP_020426595.1|2447052_2447313_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MSFLWMLIVGGVIGWLAGLIMGRDIPGGVIGNIIAGILGSWLGGMLLGSWGPKISDFYVFPSLIGAIVLIFIVSLILRSVGGRSRS
>NZ_CP048429.1|WP_062525108.1|2447586_2448642_+|lactonase-family-protein
MHQPNEVLFYAGTYNSVDRDAIILGALNKDTGEMRILNSTKGIENPSYLAVNSAGTVLYAVSEKDKGEVYAYAIEPGSKALRLLGSRPTDGGAPCYVSISPQEDYIFVSNYSGGNVNIFPVNADGSLQEMSAQVKHEGSGLREDRQEAPHPHSVIPDRSGQHVLVCDLGLDQIVFYRVEAGKLATRREVLLPPGSGPRHLAGHPSGQWLYLINELNSTITVFANDEQSADLKILQSISSLPDHYAAGSDDTAADIHVSPCGRFLYASNRGHDSIALFHIDASTGLLEAQDWVISGGRTPRNFAIIGGMLLAANQNSDNIVSFRIDSETGRLIPTGNELDLTSPVCLKPLNL
>NZ_CP048429.1|WP_082722735.1|2449170_2451501_-|hypothetical-protein
MMGMNLEYAPVPVPSPAPQRPRLHKRILGELARRILDTYCYDTQLWRTALAGPWLICFLVFTAAVLGIPTGLGTAADVMLATCAATLVLACAGNILAVLLALSGLRIPRLYAGSLLSASGAVLLVFYYADLELEAAAAVAGTAALLGGLGGLAIGLLRRRRFIMGLLLAAVVLASPFALSTRGNGDTSPEVSLSGGSPAPLNAENPGAPGNYTYHSFTYGSGRDLHRTEYGDEAGLITSAVDASAYITSWPKLRTLFWGFDYSALPVNARVWMPDGDGPYPLVLMVHGNHMMEDYSEGGYAYLGEQLASRGYIAVSLDENFLNYSAWSGIPDNDFKVRTWMILKHLQQIGIFAEESGNPFYQKVDYSRTALLGHSRGGQAVAMAADAGRWFKNDPALAATTQFHIASVIALAPTDKAIDNQQARLVDVNYLTLQGARDGDVHDFYGDRQYIRSSFTGAASSFKSSLYIADANHSQFNTSWGLYDQSLPAGLFLDRKDIMDGDAQRQIAKVYVTAFLEATLDGKEVYQNLFRDYRSGLQWLPGTAYYNRFQSGGDIVVATFDEDRNKNTVTGGTVEAAGLTWSEEAAKDRESKSKATYGLLLEHSAKDGGESYYSIKLKNSVVSGLAESGAAGLTFSMANRNADGKDTPVAAKASASPDVEVELKDSNHAAARLPLNEVMDILPLPQTRFTLLPWLEERMSDGKYGDLSEAVFQTYELPFERFIEVEPGLDPDKLSEITFYLQGEGDKIMLDDIGFYLKSTSMEGSKQTAIIQRTEK
>NZ_CP048429.1|WP_062525306.1|2451934_2453047_+|sulfate-ABC-transporter-substrate-binding-protein
MRKGIKKGLITGFALLLTAGLAACGNNNSGNGAAAATDAPAASNAAGAAEAAKAPAKDPVELLNVSYDPTRELYENYNKAFSAYWEKETGQKVTVKQSHGGSGAQSRAVQEGLEADVVTLALGYDIDALKDKGLINEGWESKFEHNSSPYTSTIVFLVRKGNPKGIKDWPDLLKEGVEVITPNPKTSGGARWNYLAAWGYALDHNNNDEAKAQEFVQELFKHVPVLDTGARGATTTFVERGIGDVLIAWENEAYLSIKELGPDKFEIVNPSESILAEPPVAVVDKVVDKRGTREVAEAYLKYLYTEEGQKIAADNYYRPTLESVKEEYKDKFPVIKLFTLADKFGTWKETQEKHFNDGGIFDKIYVPGAK
>NZ_CP048429.1|WP_062525112.1|2453159_2453999_+|sulfate-ABC-transporter-permease-subunit-CysT
MNVTTTAAVRRKVLPGFGLTMGYSVLYLSLVVLLPLSALLFNSTGLSWAKFWDIATDPRVLASYRVSLSTAAMAALADAFLGLLLAWVLVRYEFPGKRIFDALIDLPFALPTAVAGVSLTALYSQNGWIGSMLEPLGLKIAFTPLGITLALMFIGIPFVVRTVQPVLEDLDRDMEEASATLGAGRWRTFRSIVLPELIPPLLTGFALAFARGIGEYGSVVFISGNMPMRTEIAPLLIMSKLEQFDYAGATAVALLLLLISFLMLLVINTLQRWARKTSR
>NZ_CP048429.1|WP_062525114.1|2454241_2455105_+|sulfate-ABC-transporter-permease-subunit-CysW
MAGTVPMAAPRPHRSAASPATTEASAVKWVLVAAAGLVLFWLIALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNTLFGVMAAWAVTKFRFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDVKIVFALPGIVLATLFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLLYGIILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQFSASFAVASLLLLLALVTMIVKSWLTRKNAH

Crispr_ID: NZ_CP048429_15

• CRISPR_ID: NZ_CP048429_15
• CRISPR_location: 2448983-2449058
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NZ_CP048429_15

Consensus_repeat	Method
AATTAGTGGTCCTTTTTCCAACTT	CRISPRCasFinder

spacers of NZ_CP048429_15

>15.1|2449007|28|NZ_CP048429|CRISPRCasFinder
AGGCTGCAGAGATCAGTGTGCTGGGACC

CRISPR arrays and Neighbor proteins around NZ_CP048429_15

CRISPR arrays

The CRISPR arrays of NZ_CP048429_15

>merge|NZ_CP048429|15|2448983-2449058|CRISPRCasFinder
AATTAGTGGTCCTTTTTCCAACTTAGGCTGCAGAGATCAGTGTGCTGGGACCAATTAGTGGTCCTTTTTCCACTTG

>NZ_CP048429|15|15|2448983-2449058|CRISPRCasFinder
AATTAGTGGTCCTTTTTCCAACTT	AGGCTGCAGAGATCAGTGTGCTGGGACC
AATTAGTGGTCCTTTTTCCACTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062525104.1|2445093_2446056_-|L-lactate-dehydrogenase	unknown	unknown	gnl|CDD|133427
NZ_CP048429.1|WP_025707393.1|2455653_2455962_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_082722735.1|2449170_2451501_-|hypothetical-protein	unknown	unknown	gnl|CDD|372282
NZ_CP048429.1|WP_062525096.1|2436446_2437163_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226663
NZ_CP048429.1|WP_062525108.1|2447586_2448642_+|lactonase-family-protein	unknown	unknown	gnl|CDD|378416
NZ_CP048429.1|WP_082722742.1|2442983_2445011_+|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl|CDD|223910
NZ_CP048429.1|WP_062525116.1|2455205_2455427_+|YezD-family-protein	unknown	unknown	gnl|CDD|378371
NZ_CP048429.1|WP_062525102.1|2440472_2442797_+|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319847
NZ_CP048429.1|WP_062525117.1|2456695_2457328_+|NAD(P)H-binding-protein	unknown	unknown	gnl|CDD|225462
NZ_CP048429.1|WP_062525121.1|2459713_2460169_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062525106.1|2446336_2446843_-|cytochrome-c-biogenesis-protein-CcdC	unknown	unknown	gnl|CDD|377808
NZ_CP048429.1|WP_062525306.1|2451934_2453047_+|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|224529
NZ_CP048429.1|WP_082722734.1|2438500_2439556_-|cation-transporter	unknown	unknown	gnl|CDD|224151
NZ_CP048429.1|WP_062525112.1|2453159_2453999_+|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl|CDD|131194
NZ_CP048429.1|WP_062525114.1|2454241_2455105_+|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl|CDD|226665
NZ_CP048429.1|WP_074647897.1|2457682_2459596_+|bifunctional-ADP-dependent-NAD(P)H-hydrate-dehydratase/NAD(P)H-hydrate-epimerase	unknown	unknown	gnl|CDD|182554
NZ_CP048429.1|WP_062525309.1|2456217_2456625_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379228
NZ_CP048429.1|WP_025705626.1|2438045_2438411_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|238042
NZ_CP048429.1|WP_062525098.1|2437165_2437906_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226663
NZ_CP048429.1|WP_020426595.1|2447052_2447313_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP048429.1|WP_025705626.1|2438045_2438411_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	2.3e-22	74.3	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062525104.1|2445093_2446056_-|L-lactate-dehydrogenase	gnl|CDD|133427	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	4.23084e-166
NZ_CP048429.1|WP_082722735.1|2449170_2451501_-|hypothetical-protein	gnl|CDD|372282	pfam12740, Chlorophyllase2, Chlorophyllase enzyme. This family consists of several chlorophyllase and chlorophyllase-2 (EC:3.1.1.14) enzymes. Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll (Chl) degradation and catalyzes the hydrolysis of an ester bond to yield chlorophyllide and phytol. The family includes both plant and Amphioxus members.	2.557e-05
NZ_CP048429.1|WP_062525096.1|2436446_2437163_+|ABC-transporter-permease-subunit	gnl|CDD|226663	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown].	8.25425e-19
NZ_CP048429.1|WP_062525108.1|2447586_2448642_+|lactonase-family-protein	gnl|CDD|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	1.22553e-137
NZ_CP048429.1|WP_082722742.1|2442983_2445011_+|methyl-accepting-chemotaxis-protein	gnl|CDD|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.40853e-61
NZ_CP048429.1|WP_062525116.1|2455205_2455427_+|YezD-family-protein	gnl|CDD|378371	pfam10055, DUF2292, Uncharacterized small protein (DUF2292). Members of this family of hypothetical bacterial proteins have no known function.	1.01341e-14
NZ_CP048429.1|WP_062525102.1|2440472_2442797_+|cadmium-translocating-P-type-ATPase	gnl|CDD|319847	cd07548, P-type_ATPase-Cd_Zn_Co_like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis CadA which appears to transport cadmium, zinc and cobalt but not copper out of the cell. Bacillus subtilis CadA/YvgW appears to transport cadmium, zinc and cobalt but not copper, out of the cell. Functions in metal ion resistance and cellular metal ion homeostasis. CadA/YvgW is also important for sporulation in B. subtilis, the significant specific expression of the cadA/yvgW gene during the late stage of sporulation, is controlled by forespore-specific sigma factor, sigma G, and mother cell-specific sigma factor, sigma E. This subfamily also includes Helicobacter pylori CadA an essential resistance pump with ion specificity towards Cd(2+), Zn(2+) and Co(2+), and Zn-transporting ATPase, ZiaA(N) in Synechocystis PCC 6803. Transcription of ziaA is induced by Zn under the control of the Zn responsive repressor ZiaR. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP048429.1|WP_062525117.1|2456695_2457328_+|NAD(P)H-binding-protein	gnl|CDD|225462	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only].	3.94579e-72
NZ_CP048429.1|WP_062525106.1|2446336_2446843_-|cytochrome-c-biogenesis-protein-CcdC	gnl|CDD|377808	pfam07301, DUF1453, Protein of unknown function (DUF1453). This family consists of several hypothetical bacterial proteins of around 150 residues in length. The function of this family is unknown. Members of this family seem to be found exclusively in the Order Bacillales.	2.53043e-58
NZ_CP048429.1|WP_062525306.1|2451934_2453047_+|sulfate-ABC-transporter-substrate-binding-protein	gnl|CDD|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
NZ_CP048429.1|WP_082722734.1|2438500_2439556_-|cation-transporter	gnl|CDD|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	2.2418e-102
NZ_CP048429.1|WP_062525112.1|2453159_2453999_+|sulfate-ABC-transporter-permease-subunit-CysT	gnl|CDD|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	3.2194e-140
NZ_CP048429.1|WP_062525114.1|2454241_2455105_+|sulfate-ABC-transporter-permease-subunit-CysW	gnl|CDD|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	7.26935e-149
NZ_CP048429.1|WP_074647897.1|2457682_2459596_+|bifunctional-ADP-dependent-NAD(P)H-hydrate-dehydratase/NAD(P)H-hydrate-epimerase	gnl|CDD|182554	PRK10565, PRK10565, putative carbohydrate kinase; Provisional.	1.66372e-83
NZ_CP048429.1|WP_062525309.1|2456217_2456625_+|GNAT-family-N-acetyltransferase	gnl|CDD|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.07038e-09
NZ_CP048429.1|WP_025705626.1|2438045_2438411_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.66493e-20
NZ_CP048429.1|WP_062525098.1|2437165_2437906_+|ABC-transporter-permease-subunit	gnl|CDD|226663	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown].	9.12069e-29
NZ_CP048429.1|WP_020426595.1|2447052_2447313_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	8.09983e-11

Protein sequences

>NZ_CP048429.1|WP_062525108.1|2447586_2448642_+|lactonase-family-protein
MHQPNEVLFYAGTYNSVDRDAIILGALNKDTGEMRILNSTKGIENPSYLAVNSAGTVLYAVSEKDKGEVYAYAIEPGSKALRLLGSRPTDGGAPCYVSISPQEDYIFVSNYSGGNVNIFPVNADGSLQEMSAQVKHEGSGLREDRQEAPHPHSVIPDRSGQHVLVCDLGLDQIVFYRVEAGKLATRREVLLPPGSGPRHLAGHPSGQWLYLINELNSTITVFANDEQSADLKILQSISSLPDHYAAGSDDTAADIHVSPCGRFLYASNRGHDSIALFHIDASTGLLEAQDWVISGGRTPRNFAIIGGMLLAANQNSDNIVSFRIDSETGRLIPTGNELDLTSPVCLKPLNL
>NZ_CP048429.1|WP_020426595.1|2447052_2447313_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MSFLWMLIVGGVIGWLAGLIMGRDIPGGVIGNIIAGILGSWLGGMLLGSWGPKISDFYVFPSLIGAIVLIFIVSLILRSVGGRSRS
>NZ_CP048429.1|WP_062525106.1|2446336_2446843_-|cytochrome-c-biogenesis-protein-CcdC
MGNINPSLLHVGSTLGAVFMALMVIFIRLKASARPVTIRKIWIPPLGMSTGFAMFVVPEVRFPWWWAVAAFLVGWFIFAYPLIRSTKFEAREGLVYARRSKSFAFILLGLLLIRTVLHEFINQYVSIPQSGGLFFILAFGMILHWRVFMYKRYIRMVPPQTPIPEPRG
>NZ_CP048429.1|WP_062525104.1|2445093_2446056_-|L-lactate-dehydrogenase
MKSKSRKVAIVGSGMVGSSCAYSMVNQAICDEIMMIDRTYDRAMAQALDLSHCMDFTGTRTKVYAGTSSDCAGMDVVILTAGANPKPGQSRLDVLDAAAVITKDIVTEIMAGGFDGIFVIAANPVDIVTYMVWKISGLPRHRVIGTGTSIDSSRLKTLLSEVFTIDPRSVNGYALGEHGESQFVAWSHVTIGGKPILQIIEQHRERFSTLDLEDIARKTKDAGWEIFTRKGSTHFGIGSALAYITRSILNDEHKIIAVSAILDGEYGQSGVCAGAPAIIGRGGIQELLELNLSAEESKKLEASCSIIRRGIESLHLEEKV
>NZ_CP048429.1|WP_082722742.1|2442983_2445011_+|methyl-accepting-chemotaxis-protein
MDKTDVPEKMKMKAKERKSASVQTKWSLVILAIAIVPLLGTTIFFMQYFGGVTRSNSEELATKILEMNTSRIDEWLKSRTSAVQELIAQHPEFDTAQPQSIFPVVKILEESDKQSEGYSVINKEGLLTNTMNLTADMAKSAYFLKAKESLAPAVGDMSYLEPLKKYIIPLIVPVVDKKQQFSGAIAFSVTPDILNEMSKSIHVAESGYGYVVSGKGDYYAYSDMSRIGKNMADYAKEPELKKAVTAMLSRESGSETYRGEDGKTIITYYKTIPGTDWKLMINVPKSEIFAKVNAAQRLATLLIIGTILLVTLISLYLTRMAVKPLVAISGVMKRVAEGYLSERVEVRSGDEIGQMSKSINDTVSSLSGIVGTIDATVLQVAAAAEGLLEYANHSSNTSAEIATVIQEVAHGMEEQFKGSEQSARATEEMAVGLQRIAESSVSVSDQAEAVSTEVQNGYLEIQSTLEQMTVITTTAGQTADLIQTLTQQSEHIGQIIDVISEIANQTGLLSLNASIEAARAGEHGRGFGVVANEVKKLAERTNASIVDIVELIKQIQTSTTNAAQSMEKSIAEIGDGMGKMKNVGSSFEHIRSSIREVSMQIQDVSAINEEMSAGTEEITASVSDMLTIAKDSAENAQAVSHASSEQMELMKKVVSSAQSLNEMMSALKGEIEKFR
>NZ_CP048429.1|WP_062525102.1|2440472_2442797_+|cadmium-translocating-P-type-ATPase
MNVVQGNVRRQWMLEGLDCANCAMKIENKVKKIEGVTSCSVNFTMKMMTLETAAADAEAVSAEARRTVNILEPHVKVKEVKPAGLRRNPQPGASPQHGHSREAHAHADAHGHSREAHAHADAHGHSHEAHTHADAHGHSREAHAHADAHGHSHEHGEGDTRRILLRLGAGGILAAAGMFLPVSGILELLVFLAAYLIVGGEVVWSAARNIVRGQVFDENFLMALATIGAFAIGEYPEGVAVMLFYQIGELFQGMAVNRSRRSITALMDIRPEFANLKEAGNLRRVAPDEVGIGDHIVVKPGEKVPLDGTILEGSAMMDTSALTGESVPRAAEPGSKVLSGFINRNGVVTIEVTETFGESAVSKILELVQNASNNKAKTENFITKFARGYTPVVVTTALLLAVIPPLVLSGATFSDWIYRALVFLVISCPCALVVSIPLGFFGGIGAASKSGILVKGSNFLEALNDVKVVVFDKTGTLTKGEFKVTGTYPSEGFKENDLLRTAAYAESHSSHPIAESIRAAYGQEIPGDVIADYNEISGHGIAVMVEGKAVLAGNARLMEREGIASRTPEQNGTVVHIAIDQQYAGYLVIADEVKEDSLQAVQALGRLGIHRTVMLTGDASPVAEAVGQQLGIEEVHAELLPQHKVEAIEKLEREKSQREKIIFVGDGINDTPVLARADVGIAMGGLGSDAAIEAADIVIMTDEPSKIATAVSIAKRTRTIVWQNIIFALAVKALFLLLGAFGIATMWEAVFSDVGVTVLAVLNSVRALQVPKSV
>NZ_CP048429.1|WP_082722734.1|2438500_2439556_-|cation-transporter
MNNHSHQGHTHEHNEHQEHYEHHDHNQHQEHHEHNDKQKHVHNDRHGHSHSGHSHSGHSHSHAPNNKKGLLIALIITGGIMFLEFFGGLVTGSLALLSDSGHMLSDTASLALSLVAMIFAVKPPSLKNSYGYYRFEIMAALFNGVTLFVIAGFIIWEAWQRFFEPPAVASGTMMIIAAVGLLANLISAWSLMRKSDTKDNINIRSAYLHIMGDALGSVGALLAGLIMNLFSWYVADPIISVLVALLILRGAWGVLKQAFHILMEGTPVSVNTNDIKEALLKIDGVEDVHDLHVWTITSGLDALSGHLLIKDHADPHSILQQAIIVVEENFAIQHTTLQIENSSLKHGELRV
>NZ_CP048429.1|WP_025705626.1|2438045_2438411_+|winged-helix-turn-helix-transcriptional-regulator
MEPAALEECDNTCNGSELEPESMALILPDRGTTDKMAEMFKALGDPTRVRMIYALSQRELCVHDLSSILDMGQSAVSHQLRYLRNLRIVKRRKEGKTVYYSLNDAHVEQIFLQTHEHIRHE
>NZ_CP048429.1|WP_062525098.1|2437165_2437906_+|ABC-transporter-permease-subunit
MGIFWRVLSAERLKMSKSFVWLLVIGSPAVAMLIGALANMEEEGQMITWEVLLSVMSLFHAMFFLPVLSGVFAALICRAEHADGGWKQLLALPVTRTSVYLAKYTMIMALLAAVQLLFFAAVLGVGALRGVDVPIPWTMFLASIFGGWLACMPLAALQLAISQSWSSFGAPLALNVTLTMPNMLIANSSTYGPYDPWLQPMLAMSPFGEDRFGAFNLPLESLITVVLGSLILFLAVGLFSFRRKAV
>NZ_CP048429.1|WP_062525096.1|2436446_2437163_+|ABC-transporter-permease-subunit
MMWRSLSADWLKIRGKGLWFLVFLGPVGLLAMQGLNFGMRYDYLTGQYQSDLWGGLLSNLADFVPVALYLGGTLVCSLLANVEHQMSSWKQLLALPISRTSVFMAKLLICLLLVAVSCALLSAGTVALGLLLGFGTQPVPYADVLRIGFASYAAALPVIALQLWLSLSSRNQTLPVSLGLILSLLSLFSTFLSEWVPLSWPALAWSTSRPWLFSGAGLLLGLLVLLPGAVHFARKDVN
>NZ_CP048429.1|WP_082722735.1|2449170_2451501_-|hypothetical-protein
MMGMNLEYAPVPVPSPAPQRPRLHKRILGELARRILDTYCYDTQLWRTALAGPWLICFLVFTAAVLGIPTGLGTAADVMLATCAATLVLACAGNILAVLLALSGLRIPRLYAGSLLSASGAVLLVFYYADLELEAAAAVAGTAALLGGLGGLAIGLLRRRRFIMGLLLAAVVLASPFALSTRGNGDTSPEVSLSGGSPAPLNAENPGAPGNYTYHSFTYGSGRDLHRTEYGDEAGLITSAVDASAYITSWPKLRTLFWGFDYSALPVNARVWMPDGDGPYPLVLMVHGNHMMEDYSEGGYAYLGEQLASRGYIAVSLDENFLNYSAWSGIPDNDFKVRTWMILKHLQQIGIFAEESGNPFYQKVDYSRTALLGHSRGGQAVAMAADAGRWFKNDPALAATTQFHIASVIALAPTDKAIDNQQARLVDVNYLTLQGARDGDVHDFYGDRQYIRSSFTGAASSFKSSLYIADANHSQFNTSWGLYDQSLPAGLFLDRKDIMDGDAQRQIAKVYVTAFLEATLDGKEVYQNLFRDYRSGLQWLPGTAYYNRFQSGGDIVVATFDEDRNKNTVTGGTVEAAGLTWSEEAAKDRESKSKATYGLLLEHSAKDGGESYYSIKLKNSVVSGLAESGAAGLTFSMANRNADGKDTPVAAKASASPDVEVELKDSNHAAARLPLNEVMDILPLPQTRFTLLPWLEERMSDGKYGDLSEAVFQTYELPFERFIEVEPGLDPDKLSEITFYLQGEGDKIMLDDIGFYLKSTSMEGSKQTAIIQRTEK
>NZ_CP048429.1|WP_062525306.1|2451934_2453047_+|sulfate-ABC-transporter-substrate-binding-protein
MRKGIKKGLITGFALLLTAGLAACGNNNSGNGAAAATDAPAASNAAGAAEAAKAPAKDPVELLNVSYDPTRELYENYNKAFSAYWEKETGQKVTVKQSHGGSGAQSRAVQEGLEADVVTLALGYDIDALKDKGLINEGWESKFEHNSSPYTSTIVFLVRKGNPKGIKDWPDLLKEGVEVITPNPKTSGGARWNYLAAWGYALDHNNNDEAKAQEFVQELFKHVPVLDTGARGATTTFVERGIGDVLIAWENEAYLSIKELGPDKFEIVNPSESILAEPPVAVVDKVVDKRGTREVAEAYLKYLYTEEGQKIAADNYYRPTLESVKEEYKDKFPVIKLFTLADKFGTWKETQEKHFNDGGIFDKIYVPGAK
>NZ_CP048429.1|WP_062525112.1|2453159_2453999_+|sulfate-ABC-transporter-permease-subunit-CysT
MNVTTTAAVRRKVLPGFGLTMGYSVLYLSLVVLLPLSALLFNSTGLSWAKFWDIATDPRVLASYRVSLSTAAMAALADAFLGLLLAWVLVRYEFPGKRIFDALIDLPFALPTAVAGVSLTALYSQNGWIGSMLEPLGLKIAFTPLGITLALMFIGIPFVVRTVQPVLEDLDRDMEEASATLGAGRWRTFRSIVLPELIPPLLTGFALAFARGIGEYGSVVFISGNMPMRTEIAPLLIMSKLEQFDYAGATAVALLLLLISFLMLLVINTLQRWARKTSR
>NZ_CP048429.1|WP_062525114.1|2454241_2455105_+|sulfate-ABC-transporter-permease-subunit-CysW
MAGTVPMAAPRPHRSAASPATTEASAVKWVLVAAAGLVLFWLIALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNTLFGVMAAWAVTKFRFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDVKIVFALPGIVLATLFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLLYGIILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQFSASFAVASLLLLLALVTMIVKSWLTRKNAH
>NZ_CP048429.1|WP_062525116.1|2455205_2455427_+|YezD-family-protein
MAKPLKVDEVWLARIVELLDNMEFGSLHIVVHEGQIVQMERTERKRFENSTANARYSGEAGSRRTDSRSAGRG
>NZ_CP048429.1|WP_025707393.1|2455653_2455962_-|hypothetical-protein
MTPIGKLFKWGTFAYEAFLALPFIGGAFVVANAWAPLGVAFLLHAVAVVLLLRERGPIVGNVVGIVTSVVALIPFVGWIMHAVTAIILLIEGISASRRTPRY
>NZ_CP048429.1|WP_062525309.1|2456217_2456625_+|GNAT-family-N-acetyltransferase
MEDKLELRHERPSVEQYLALRMEAGLSAMSAEGAEIGLPRSIFAVTLYEEGSLVGMGRVVGDGGCFFQVTDIAVKPSCQGRGLGKIIMREIRSFLDTVPDRSYISLIADGEAARLYVQYGFEPVMPASQGMFLRR
>NZ_CP048429.1|WP_062525117.1|2456695_2457328_+|NAD(P)H-binding-protein
MDVVVFGATGTIGRAIVQEALKRKHEVTAVVRNPASLELEDERLQVTTADILDPAAVAEAVRGHHEVISAFGPAAGRENDLLRAAESLLEGLQAAGLKRLLVIGGAGTLKTESGEWLMDTPGFPEKFRPLAEAHGHAYEIYSASSLDYTYLSPPAVIRPGRRTGQFRIGLDRLVVDENGDSSISVEDFAVAVIDELEEGNFSRTRFTVGY
>NZ_CP048429.1|WP_074647897.1|2457682_2459596_+|bifunctional-ADP-dependent-NAD(P)H-hydrate-dehydratase/NAD(P)H-hydrate-epimerase
MYIVTAQDMRELDRQTIERLGIPAVALMENAGRAIAEEIIKLCRRRFGGADTSAAWTLGTSRTVQDGGARQPGRTEAGALDRSPDGGAYSPGGTRGDGVYGPDGTWVGRVYGPDGAWAGRVYGPDGAWGDGVYGPDGAWAGRVYGPDGTQGTGGGPGIKPPGFTVSGDAALTLGRAGAEHWLVLVGKGNNGGDGIAAARHLREAGIAVTLVYAAAPESLAGEAALQRDAAAAMGLPAVVYGRDRVDFAACSGILDALLGTGSAGAPRGAYAELIAAANGSGKPVVSADIPSRLDADTGQTHKPCIHAAVTVCLAFLKRGLLQYPGAGNAGQVVVRSIGIPAALAREGGVPASLLTPEVLRTRLQVDVSRRRSPEGHKGTYGHVLLAAGSLSMSGAGLLAARAALRAGCGLVTWALPSMLLPYVIGAAPELMLAAAGGENGTWSAGTAAEVLRLSTGRDVTAVGPGLGRFPGDQEWLRALWEGIDAPMVIDADALNMLADSDYSSWTSRRHPVILTPHPGEMARLAGISTAEVQRDRIGLALAYAREHGVTLVLKGAHTVVATPEGEAYVNITGHPGMGTGGAGDVLTGIIAGLLAQGLNAAQAAAFGVYLHGLAGERAARQRHDPSALIAGDIIEAL
>NZ_CP048429.1|WP_062525121.1|2459713_2460169_-|hypothetical-protein
MNKLKDYDLPSVRLSAGMYALTKLSAAGLTFMLVSLAMLAFPHTDGVPEGWPASVPYAIYAYGLPAALVSDALLRVFRFASLTPALVLYAACGYGAGVWLAAEQGGDAVTCGIAGIFALLLFRLAQLAGERQPLLLPVFALFVPLICLVLF

Crispr_ID: NZ_CP048429_16

• CRISPR_ID: NZ_CP048429_16
• CRISPR_location: 2733515-2733588
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_16

Consensus_repeat	Method
AATTAGTTATCCTTTTTCCACTT	CRISPRCasFinder

spacers of NZ_CP048429_16

>16.1|2733538|28|NZ_CP048429|CRISPRCasFinder
AGGCTGCGGAGATCGGTGTGCTGGTGCA

CRISPR arrays and Neighbor proteins around NZ_CP048429_16

CRISPR arrays

The CRISPR arrays of NZ_CP048429_16

>merge|NZ_CP048429|16|2733515-2733588|CRISPRCasFinder
AATTAGTTATCCTTTTTCCACTTAGGCTGCGGAGATCGGTGTGCTGGTGCAAATTAGTTATCCTTTTTCCACTT

>NZ_CP048429|16|16|2733515-2733588|CRISPRCasFinder
AATTAGTTATCCTTTTTCCACTT	AGGCTGCGGAGATCGGTGTGCTGGTGCA
AATTAGTTATCCTTTTTCCACTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062524161.1|2724719_2726216_+|amidophosphoribosyltransferase	unknown	unknown	gnl|CDD|223112
NZ_CP048429.1|WP_062524174.1|2739963_2740794_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|366166
NZ_CP048429.1|WP_062524171.1|2737723_2738674_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524172.1|2738717_2739380_-|DUF1129-family-protein	unknown	unknown	gnl|CDD|368981
NZ_CP048429.1|WP_062524158.1|2720489_2721380_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl|CDD|133469
NZ_CP048429.1|WP_062524175.1|2740972_2741749_+|dioxygenase	unknown	unknown	gnl|CDD|153375
NZ_CP048429.1|WP_062524167.1|2731875_2733192_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|376935
NZ_CP048429.1|WP_062524176.1|2741924_2743034_+|DUF3048-domain-containing-protein	unknown	unknown	gnl|CDD|378618
NZ_CP048429.1|WP_062524159.1|2721821_2722511_+|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	unknown	unknown	gnl|CDD|235140
NZ_CP048429.1|WP_019913657.1|2721570_2721816_+|phosphoribosylformylglycinamidine-synthase-subunit-PurS	unknown	unknown	gnl|CDD|235659
NZ_CP048429.1|WP_062524170.1|2736385_2737648_+|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl|CDD|236318
NZ_CP048429.1|WP_062524160.1|2722488_2724735_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl|CDD|234921
NZ_CP048429.1|WP_062524177.1|2743238_2743856_+|DUF47-domain-containing-protein	unknown	unknown	gnl|CDD|224310
NZ_CP048429.1|WP_062524169.1|2735590_2735848_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein	unknown	unknown	gnl|CDD|378175
NZ_CP048429.1|WP_062524168.1|2733947_2735357_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524164.1|2727914_2728532_+|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl|CDD|235544
NZ_CP048429.1|WP_062524166.1|2730334_2731600_+|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl|CDD|234856
NZ_CP048429.1|WP_062524173.1|2739562_2739763_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524165.1|2728764_2730312_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl|CDD|234854
NZ_CP048429.1|WP_062524163.1|2726877_2727918_+|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062524161.1|2724719_2726216_+|amidophosphoribosyltransferase	gnl|CDD|223112	COG0034, PurF, Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism].	0
NZ_CP048429.1|WP_062524174.1|2739963_2740794_+|alpha/beta-fold-hydrolase	gnl|CDD|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	2.94667e-14
NZ_CP048429.1|WP_062524172.1|2738717_2739380_-|DUF1129-family-protein	gnl|CDD|368981	pfam06570, DUF1129, Protein of unknown function (DUF1129). This family consists of several hypothetical bacterial proteins of unknown function.	6.35536e-12
NZ_CP048429.1|WP_062524158.1|2720489_2721380_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl|CDD|133469	cd01414, SAICAR_synt_Sc, non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. Eukaryotic, bacterial, and archaeal group of SAICAR synthetases represented by the Saccharomyces cerevisiae (Sc) enzyme, mostly absent in metazoans. SAICAR synthetase catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.	7.95765e-137
NZ_CP048429.1|WP_062524175.1|2740972_2741749_+|dioxygenase	gnl|CDD|153375	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine. This subfamily is composed of plant 4,5-DOPA Dioxygenase, the uncharacterized Escherichia coli protein Jw3007, and similar proteins. 4,5-DOPA Dioxygenase catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine (4,5-DOPA). The reaction results in the opening of the cyclic ring between carbons 4 and 5 and producing an unstable seco-DOPA that rearranges to betalamic acid. 4,5-DOPA Dioxygenase is a key enzyme in the biosynthetic pathway of the plant pigment betalain. Homologs of DODA are present not only in betalain-producing plants but also in bacteria and archaea. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.	7.70118e-116
NZ_CP048429.1|WP_062524167.1|2731875_2733192_+|tetratricopeptide-repeat-protein	gnl|CDD|376935	pfam02810, SEC-C, SEC-C motif. The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some SWI2 ATPases and also solo in several proteins. The motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain.	1.94402e-10
NZ_CP048429.1|WP_062524176.1|2741924_2743034_+|DUF3048-domain-containing-protein	gnl|CDD|378618	pfam11258, DUF3048, Protein of unknown function (DUF3048) N-terminal domain. Some members in this bacterial family of proteins are annotated as YerB. However currently no function is known. This entry represents the N-terminal domain.	5.3804e-64
NZ_CP048429.1|WP_062524159.1|2721821_2722511_+|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	gnl|CDD|235140	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ.	1.45175e-150
NZ_CP048429.1|WP_019913657.1|2721570_2721816_+|phosphoribosylformylglycinamidine-synthase-subunit-PurS	gnl|CDD|235659	PRK05974, PRK05974, phosphoribosylformylglycinamidine synthase subunit PurS; Reviewed.	9.07047e-41
NZ_CP048429.1|WP_062524170.1|2736385_2737648_+|threonine-ammonia-lyase-IlvA	gnl|CDD|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NZ_CP048429.1|WP_062524160.1|2722488_2724735_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl|CDD|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_CP048429.1|WP_062524177.1|2743238_2743856_+|DUF47-domain-containing-protein	gnl|CDD|224310	COG1392, COG1392, Phosphate transport regulator (distant homolog of PhoU) [Inorganic ion transport and metabolism].	3.4209e-35
NZ_CP048429.1|WP_062524169.1|2735590_2735848_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein	gnl|CDD|378175	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein. Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure.	2.41697e-06
NZ_CP048429.1|WP_062524164.1|2727914_2728532_+|phosphoribosylglycinamide-formyltransferase	gnl|CDD|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	1.1445e-99
NZ_CP048429.1|WP_062524166.1|2730334_2731600_+|phosphoribosylamine--glycine-ligase	gnl|CDD|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_CP048429.1|WP_062524165.1|2728764_2730312_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl|CDD|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_CP048429.1|WP_062524163.1|2726877_2727918_+|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0

Protein sequences

>NZ_CP048429.1|WP_062524167.1|2731875_2733192_+|tetratricopeptide-repeat-protein
MSKVGRNDLCPCGSGKKYKKCCLDKESSAVESILRLVTTEEAAAAQELAAARPEMEQAVQETSIQPEGKLTLTKLKKMVARELKWEHPAHEQLALQLIESMRNQYERELIFEALVLWNGYSRQTRPAVKKTGSFCAAIEYLLSEEYGFNVSQAELADKYEVTAATISRKVKEMLNYIEEYGMGGEADELMMLNGPGTPKDKAQALLYKAMEASSSKRRIQLAETALEMYPDSSDAYLILAEESDNEHDARAYLKAGIAAGERELGELFFEKNKGYFWGLHETRPYIRVCKSYAESCWFGGNAKEAAQILEHILELNTEDNTGARYLLTAVYLYSNQLKQAEQVLEKYGKDDAAAAFAYDRIILEYKKNGITSQLKMLYRVARGVNKHVPDYLLGVKRLPHNLPDFVGMGDSNEAIEYVIMHSRLWASVPDLLKWMLKQ
>NZ_CP048429.1|WP_062524166.1|2730334_2731600_+|phosphoribosylamine--glycine-ligase
MDILVVGGGGREHAIIWSLSRSPKAGKIYCAPGNAGIAQLAECVPIGMFEFDKLTAFAKEKSIDYVVIGPDDPLAAGIVDAFEAQHIPVFGPRKNAAEIEGSKTFMKDLLHKYSIPTAAYEKFSEYEAALSYLRSQGLPIVIKADGLAAGKGVTVAYSREEAELALRDIMVTKVFGEAGAQVVIEEFLAGQEMSILAFVDGETVRPMAAAQDHKPVFDGDKGPNTGGMGTYSPLPHIDEAIIQEAVETIIKPTARAMVAEGRPFSGVLFAGLMISPDGKPKTIEFNARFGDPETQVVLPRLKSDLLEIFLAVTEGRLAEADIEWSEEAAVCVVLASEGYPGPYPKGVPITGLENSSNDLVFHAGTERDEDGTWVTNGGRVLGVVGMGASIAEARSAAYASVAKISFPGMHSRSDIAMKALI
>NZ_CP048429.1|WP_062524165.1|2728764_2730312_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MSIKRALVSVSDKQGIVDFCRGLSALGVEIISTGGTSTLLAKEGVPVIGISDVTGFPEIMDGRVKTLHPAVHSGLLAVRDNEEHTRQMQELGLDYIDLVVVNLYPFAETIAKPDVSYEEAIENIDIGGPTMLRSAAKNHAFVSVVVDAADYATVLEEVRAGGDTTLETRKRLAAKVFRHTAAYDALISDYLANVTGEPLPERYTVTYEKIQDLRYGENPHQKAAFYRKPLAAQDSLTSAEQLHGKELSYNNINDANAALQIVKEFEEPAVVAVKHMNPCGVGVGASVYEAYQKAYNADPTSIFGGIVAANRIIDADTANMLKDIFLEIVLAPGFTEEALEILTKKKNIRLLKLGNLSTAAARKSSFVVTSIEGGMVVQESDVHSVNPEELQVVTNRKPTEEELKQLLFGWKVVKHVKSNAIVLAADDMTVGVGAGQMNRVGAAKIAIEQAGEKAKGSVLASDAFFPMGDTLEMAAKAGITAVIQPGGSIKDEESIKVANEYGIAMVFTGVRHFKH
>NZ_CP048429.1|WP_062524164.1|2727914_2728532_+|phosphoribosylglycinamide-formyltransferase
MMQWSRIAVFASGQGSNFAALAEAERAGRLGGGRIELLVSDRPEAPVAKRAEEAGIPALLLRPKDFASRELYEAEIVAELQRRNIGLIVLAGYMRLITPVLLAPYAGRIVNIHPSLLPAFAGKDAIGQALDYGVKLTGVTVHFVDGGMDTGPVIAQRSVAVEPGDSAESLAERIHQVEYELYPEIVRALAEGRVMLDERKTVIRE
>NZ_CP048429.1|WP_062524163.1|2726877_2727918_+|phosphoribosylformylglycinamidine-cyclo-ligase
MSEAYKNAGVDIAAGNEAVERMKKHVKRTFRPEVMTELGGFGALFGLNKDKYEEPVLVSGTDGVGTKLKIAFAADRHDTIGIDAVAMCVNDIVVQGAEPLFFLDYLACDKVVPEKIEAIVAGIAEGCHQAGCALIGGETAEMPGMYSAGEYDIAGFTVGVADKAKLVTGADIAPGDTVIGLASSGVHSNGFSLVRKLLLEEDGYGLNDVVPELGAPLADVLLAPTKIYVKPLLGLLEQLPVKGMAHITGGGFIENIPRVLPEGVNVDINYGSWPVLPIFDLLQKKGGVSNRDMFTTFNMGVGLVLVVAEADGERALELLKAAGEEAYRIGRVTEGERIVTFTGAEV
>NZ_CP048429.1|WP_062524161.1|2724719_2726216_+|amidophosphoribosyltransferase
MSYEIKTGNRQENPILWTGDFYNEGTGSGDIFDTLKEECGVFGVFGHPEAASMSYYGLHALQHRGEESAGICVADGRDFHYHRGMGLVKEVFDKDKIASLIGNMSIGHVRYSTSGDSRLTNAQPLVFKYRDGDLAIATNGNIVNEPLIRKQLEQSGSIFQTTSDTEVLAHLIARSQKEFVEATKDALRQLVGGFAFLLMTNDKLIVASDTHGLRPLVMGRVGEAYIFASESCALEVIGAQFVRDIEPGELLVLDRNGFLEDRFAEPQRKALCAMEYIYFARPDSDLNGSNLHSARKRMGSRMALEAFVDADIVTGVPDSSISAAIGYAEQTGIPYELGLIKNKYTGRTFIQPSQELREQGVKMKLSAVRRVVEGQRVVMIDDSIVRGTTSRRIVNLLREAGATEVHVRITSPPFKNPCFYGIDTPDRRELIASYKTIEEMCKEINADSLAFLTPEGLIQSIGGYNSGDYKGGLCLSCFDNDYPTQVDFGGEEKDGCSC
>NZ_CP048429.1|WP_062524160.1|2722488_2724735_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MTQQVSAKEPTAEQIAEQKIYNQFGVSDSEYELITSFMGRKPNYTEIGVFSVMWSEHCAYKNSKPLLGRFPTSGPRVLMGPGEGAGIVDIGDNQAVVFKIESHNHPSAVEPYQGAATGVGGIIRDIFSMGARPVALMNSLRFGKLESDRVKYLFEHVVSGIAGYGNCIGIPTVGGEIMFDNSYDGNPLVNAMCVGLIDHDKIQRGVAKGVGNPVFYVGPPTGRDGIHGATFASVELSEESEAKKTAVQVGDPFMEKLVMESCLELIDSGIVLGIQDMGAAGLTCSSAEMASKAGNGLELYLDQVPQREDGMTPYEMMLSESQERMLFVVEPKDEAQAQEIFDRWGVICRKVGKVTDDGRLKLFHHGEVVGDMPVTALVDECPIYKKPSAVPAYYEENASVDTLRYEEVKDLGGALHTVLASPTVASKAWVYNQYDYMVRTSTAVRPGSDAAVVTIHGTRKGLAMTTDCNGRYVYLDPEVGGRIAVSEAARNIVCSGAKPLAITDNLNFGSPEKPEIFWQMERAVDGMAEACRVLDTPVIGGNVSLYNENASGAIYPTPVVGMVGLVEDTDHITTQAFKQEGDAILLLGVTKAELGGSEFQYAVHGLTEGRPPELDLATEQKLLDAVLAAIRSGLVRSAHDLSEGGLAAALAESCISGSIGANVEWSAGGLRRDVALFSESQSRIVLTAAPGRAEELRAAVAAYGVPAEIIGTVGGGRLRVSLDGEAVLDETVAALKTTWEDAIPCLMK
>NZ_CP048429.1|WP_062524159.1|2721821_2722511_+|phosphoribosylformylglycinamidine-synthase-subunit-PurQ
MKFAVLVFPGSNCDIDCYKAVEDSLSEPVEYVWHTATDLSAYDCILVPGGFSYGDYLRCGAISRFAPVMGEVAKAAEQGKFVLGICNGFQILTEAGLLPGALRRNMSMKFRCHDTVLKVVNNTTPFTVDYAKDEEIVIPIAHGEGNYYCDEETMAGLKANNQIVFTYSDNPNGSVEHIAGICNVQGNVVGMMPHPERAANSLLGSEDGKRMFTSILKTWRDRYDAASIR
>NZ_CP048429.1|WP_019913657.1|2721570_2721816_+|phosphoribosylformylglycinamidine-synthase-subunit-PurS
MLKATVYVTIKKSVLDPQGVAVQGALHSVGFQEVESLRIGKYMELTLDTDNRAEAEGRLKEMCEKLLANTVIEDYRYELED
>NZ_CP048429.1|WP_062524158.1|2720489_2721380_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MTYPAVSTAVDLVNAPLLYKGKVRELYDLGEEVLIVVTDRISAFDYVLDPAVPEKGNVLNRLSAFWFGKTSELMENHVVHIDVDQLGGIVKDREALRNRIMVVRKAERIDIECVVRGCITGGGWRQYQETGKVNGIGLPAGLRKNAQLSQPIFTPAAKNDVGHDEDIPFEKMQELIGAELALELKEKSLKLFSFAREYCEERGIILADCKFEFGLLDGKVILIDEIFTPDASRFWAKDKYALDIEIDSMDKEPVRTYLSASSWDKNSTPDPLPAEVVEETTRRYLDIYHRLTGKSL
>NZ_CP048429.1|WP_062524168.1|2733947_2735357_+|hypothetical-protein
MNHATTIRTELESFIEREALSFSQLGRLAGLNAGTVSSILKGNRIMGVDQLDRMTAVLGMPKGHFYEQYIQECMVEAVPNWRRVRPFLYRCAELDKLDCIRRILPLLLDNLTYSPLLFETAEEFFAEGRRAAAALLYESVALSERRQHSERLAFCQYRLFTLRLSDNQEDNLQCALQFEPFVDRLDEIDQLDALRDLANTYRSLRRWDKVERIAEEMGRLAKIQLFTTPKPARAKREQPKKPKKPMFVYLAFSYLLRGSVCDSRNDYEQGIQYTYAYEDLSWVKETDEETLHWLKLYKGWAQANIYVSKLMRGDESVLADYVSYIEKNKDELLVGLLNITTAANLFDLNVDVILQYFDSEIKGYMQIKHQEAVGVYTKQVASEQHARFLYGVAQYYLKQGLYQVGFEYLLASLSKSSLINNETRILACVRLFEKYRVLASPETQNRYQNLLKEEEEEHEKNIGIPIGRS
>NZ_CP048429.1|WP_062524169.1|2735590_2735848_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein
MREEECLKQVLEQARQDLNNLQYQYDLDHPAVLHQSMVLDELINQYTRSNITQVKKRSGAAGSRLASEELWPTRSQLYRTANSAS
>NZ_CP048429.1|WP_062524170.1|2736385_2737648_+|threonine-ammonia-lyase-IlvA
MREGEDRIVGMEDIVRAHHVLREVIVRTPLQLDAVLSARYGCSVYLKREDLQIVRSFKIRGAYNMIRSLSAEDRAKGIVCASAGNHAQGVAYSCKALGIKGKIYMPSTTPNQKIKQVRKFGGEFVEVILKGDTFDDAYDEALQACIDHSMTLIHPFDEPRIIAGNGTIAMEVMESLDKPADFVFVTIGGGGLAAGVATYVKTVSPSTKVIGVEPSGAASMSEALQRGEVVTLEEINKFVDGAAVKRVGGLTYDICSRRLDDVVKVPEGKACTTILELYNENAIVVEPAGSLPIAALDLYRDQIRGKTVVCIVSGGNNDIDRMQEIKERSLIYEGLKHYFMVNFPQRAGALREFLAEVLGPGDDITRFEYTKKNDKENGPALVGIELQHKEDYTPLIERMKQKGVDYLEINKDPNLFNMLI
>NZ_CP048429.1|WP_062524171.1|2737723_2738674_-|hypothetical-protein
MKIKTTILTAAVAAALGLQAGLPGHVLAEGSGSSTSGSAAAGSKPAASANSHAEAVYKAALPLLSSSARLPEAIKYLNSNIYALTPYQATVLTLKLENLHKAALKAWESKFMNSIVQRKLTSVYKAGISMAKLAESTDDTSLRSLLKSAGESGYKLETAEGSFFPVIDYAAYRKYRVYVTADIRYYISIMGTETDLPSSKDNGLVISWGDVAARALSQEEFIQSYPKSNRISAVKALYSTYVINTFYGQNNTPLFHYDNLEMDLEAQKAYSGLLTKNNGSSPFLQKLDGLMKLLKDNGYKLDDGVTEYLKSEVPQS
>NZ_CP048429.1|WP_062524172.1|2738717_2739380_-|DUF1129-family-protein
MKVKAMIKQNNALREQMTPFNRSYYEDMLLGLRASKVDPVRTEELLLEAAALLLEGQGKGKNAKQIFGEHPEDYFKEIAGSAPARKVRSKLNYYLMIPWAALTGLFSVYAISGLLLLWSTGEAGMFGQISIFTILAVGAGSIVLIEIIMKWLSSLSEDDAPKPKPFDIKGLGIYVGIAIIVVFLGIFLDNLFPVISLSPWVSLVVAVAGGLGLKFIFFKS
>NZ_CP048429.1|WP_062524173.1|2739562_2739763_+|hypothetical-protein
MDTEKREEPGKFVGDGFAPALAGEVGDWGNSDGFSLWDSAQGEPDNGLGDWEGRQETHDMFHQSYE
>NZ_CP048429.1|WP_062524174.1|2739963_2740794_+|alpha/beta-fold-hydrolase
MERNIIIRHNGEEITASIHYPAREKGTSGRCKDRVPLAVICHGFVGSRIGVDRIFVKAARELAADGYMVIRFDYVGCGESSGNYGSEDMESMIAQTRAVLDYGISSADVDPQRITLIGHSLGGAVALLTGVRDRRIKNLVLWAAVGYPFNDIVKIVGREAYDRAVTSGSADFAGYSFTPVYFNSLAAFQPFQEAGKFSGDVLVIHGTSDDVIPVDYAFLYQKLFWTRPEGRCDKEVIFQADHTFSSGPAQAQVLKRTKDWMNQQEHIQEEWQNWMI
>NZ_CP048429.1|WP_062524175.1|2740972_2741749_+|dioxygenase
MKLPAFFIAHGSPLLALEDNEYTRFLERLGADLGTPRGIVVFSAHWDSPEQLITVDGQHETLHDFYGFPDEMYSLTYPAPGDPALSRRISELFTANNLPHQPVLGRGLDHGIWVILKKMFPAADIPVVALSVDSLRSPEEQYNIGKMLAPLRDEGVLLIGSGGLVHNLRLLKQDDQPEQWALDFDAWIANGLTTWDLPSLFAYEKKAPHVRDAVPTYGREHFVPLFYVMGTADEGRRAQLMIQAYQYGTLSLNCWMVD
>NZ_CP048429.1|WP_062524176.1|2741924_2743034_+|DUF3048-domain-containing-protein
MTLSRYSSRLISGCVLAALLLTACGAQQAETVPAPTAAPVPAPSPSPAPSAGPSPTAEPAAGLITSGLTGLPLEEMSLPRPLAVMINNAPAARPQSGISEADILYEVLAEGGITRLVGIFQSHTGVVKIGPIRSIRPYLIDIGESYGGVTVHAGGSPAAYAILQKEKKDDMDEIGRAGAYFWRDKERKAPHNLYSNAAKLREGADKLGYAGTAEVPGYLFTDKNDVLTEGEPAAEFKINFLLKSYTVGYKYSSERGTYLRWVNGKPHLDLNNGNPVEAANVIVMGADHKVLDDVGRLQIDIELGGEAVLFQRGQAVKGRWSRKPEDVIRFVKSDGTEAAMYPGVTHILIVPNSPTFSSHMEVSRVPVST
>NZ_CP048429.1|WP_062524177.1|2743238_2743856_+|DUF47-domain-containing-protein
MKLRKKDIFFETLENMADTIVQAADYFAQNITTLRENVENFAGVMKKYESQCDTYTHTVIKELNKTFITPLERDDIMDLITSMDDVIDGLEASASRFYMYNLLEPDEYIVQFAEILRQSAYEIQKAVHLLSQKKLLAIREYTIRLNDLENQGDEVLRICTKALFETVKDPIELIKRKELYERLETTTDKCEDVANMLESIIMRNS

Crispr_ID: NZ_CP048429_17

• CRISPR_ID: NZ_CP048429_17
• CRISPR_location: 3002845-3002981
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP048429_17

Consensus_repeat	Method
TTAGATGGAATTTCTCCACTTCAT	CRISPRCasFinder

spacers of NZ_CP048429_17

>17.1|3002869|27|NZ_CP048429|CRISPRCasFinder
GGTGCCCTGTTGAGCTGGTGCAGAGCT
>17.2|3002920|38|NZ_CP048429|CRISPRCasFinder
TCAGCGAATTTTGGCCTGAAAGGGTTGTAATCGCCGAA

CRISPR arrays and Neighbor proteins around NZ_CP048429_17

CRISPR arrays

The CRISPR arrays of NZ_CP048429_17

>merge|NZ_CP048429|17|3002845-3002981|CRISPRCasFinder
TTAGATGGAATTTCTCCACTTCATGGTGCCCTGTTGAGCTGGTGCAGAGCTTTAGTTGGAATTTCTCCACTTCATTCAGCGAATTTTGGCCTGAAAGGGTTGTAATCGCCGAATTAAGTGGATTTTTTCCACCTATT

>NZ_CP048429|17|17|3002845-3002981|CRISPRCasFinder
TTAGATGGAATTTCTCCACTTCAT	GGTGCCCTGTTGAGCTGGTGCAGAGCT
TTAGTTGGAATTTCTCCACTTCAT	TCAGCGAATTTTGGCCTGAAAGGGTTGTAATCGCCGAA
TTAAGTGGATTTTTTCCACCTATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062520817.1|3004549_3006871_+|alpha-xylosidase	unknown	unknown	gnl|CDD|236731
NZ_CP048429.1|WP_062520800.1|2992517_2993801_-|hypothetical-protein	unknown	unknown	gnl|CDD|225306
NZ_CP048429.1|WP_062520796.1|2990358_2990853_+|CYTH-domain-containing-protein	unknown	unknown	gnl|CDD|143626
NZ_CP048429.1|WP_062520825.1|3010650_3012483_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519
NZ_CP048429.1|WP_062520809.1|2998724_2999600_+|radical-SAM-protein	unknown	unknown	gnl|CDD|223609
NZ_CP048429.1|WP_062520805.1|2996758_2997532_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|181295
NZ_CP048429.1|WP_062520819.1|3007138_3008320_+|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl|CDD|238141
NZ_CP048429.1|WP_062520798.1|2991031_2992420_+|threonine-synthase	unknown	unknown	gnl|CDD|236418
NZ_CP048429.1|WP_062520815.1|3003405_3004323_-|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225117
NZ_CP048429.1|WP_082722549.1|3014391_3015699_+|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|224567
NZ_CP048429.1|WP_025705410.1|3012616_3013498_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP048429.1|WP_062520829.1|3015784_3016015_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062520807.1|2997698_2998685_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP048429.1|WP_062520804.1|2995896_2996706_+|acetoacetate-decarboxylase-family-protein	unknown	unknown	gnl|CDD|377649
NZ_CP048429.1|WP_062520813.1|3000617_3002744_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|180751
NZ_CP048429.1|WP_062520811.1|2999714_3000515_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062520802.1|2993932_2995873_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274912
NZ_CP048429.1|WP_062520821.1|3008408_3008717_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062520823.1|3009013_3010654_-|response-regulator	unknown	unknown	gnl|CDD|381091
NZ_CP048429.1|WP_062520827.1|3013497_3014331_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062520817.1|3004549_3006871_+|alpha-xylosidase	gnl|CDD|236731	PRK10658, PRK10658, putative alpha-glucosidase; Provisional.	0
NZ_CP048429.1|WP_062520800.1|2992517_2993801_-|hypothetical-protein	gnl|CDD|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	6.7482e-15
NZ_CP048429.1|WP_062520796.1|2990358_2990853_+|CYTH-domain-containing-protein	gnl|CDD|143626	cd07761, CYTH-like_CthTTM-like, Clostridium thermocellum (Cth)TTM and similar proteins, a subgroup of the CYTH-like superfamily. CthTTM is a metal dependent tripolyphosphatase, nucleoside triphosphatase, and nucleoside tetraphosphatase. It hydrolyzes the beta-gamma phosphoanhydride linkage of triphosphate-containing substrates including tripolyphosphate, nucleoside triphosphates and nucleoside tetraphosphates. These substrates are hydrolyzed, releasing Pi. Mg++ or Mn++ are required for the enzyme's activity. CthTTM appears to have no adenylate cyclase activity. This subgroup consists chiefly of bacterial sequences. Members of the CYTH-like (also known as triphosphate tunnel metalloenzyme (TTM)-like) superfamily have a unique active site located within an eight-stranded beta barrel.	1.00555e-33
NZ_CP048429.1|WP_062520825.1|3010650_3012483_-|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.87786e-41
NZ_CP048429.1|WP_062520809.1|2998724_2999600_+|radical-SAM-protein	gnl|CDD|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	1.43454e-18
NZ_CP048429.1|WP_062520805.1|2996758_2997532_+|SDR-family-oxidoreductase	gnl|CDD|181295	PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional.	1.73229e-81
NZ_CP048429.1|WP_062520819.1|3007138_3008320_+|SGNH/GDSL-hydrolase-family-protein	gnl|CDD|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	1.10784e-14
NZ_CP048429.1|WP_062520798.1|2991031_2992420_+|threonine-synthase	gnl|CDD|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_CP048429.1|WP_062520815.1|3003405_3004323_-|AraC-family-transcriptional-regulator	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.04367e-26
NZ_CP048429.1|WP_082722549.1|3014391_3015699_+|carbohydrate-ABC-transporter-substrate-binding-protein	gnl|CDD|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	1.76032e-43
NZ_CP048429.1|WP_025705410.1|3012616_3013498_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	9.84116e-73
NZ_CP048429.1|WP_062520813.1|3000617_3002744_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|180751	PRK06922, PRK06922, class I SAM-dependent methyltransferase.	0
NZ_CP048429.1|WP_062520804.1|2995896_2996706_+|acetoacetate-decarboxylase-family-protein	gnl|CDD|377649	pfam06314, ADC, Acetoacetate decarboxylase (ADC). This family consists of several acetoacetate decarboxylase (ADC) proteins (EC:4.1.1.4).	1.49836e-53
NZ_CP048429.1|WP_062520807.1|2997698_2998685_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	6.17831e-63
NZ_CP048429.1|WP_062520802.1|2993932_2995873_+|FAD-dependent-oxidoreductase	gnl|CDD|274912	TIGR03997, NADH:flavin_oxidoreductase, mycofactocin system FadH/OYE family oxidoreductase 2. The yeast protein called old yellow enzyme and FadH from Escherichia coli (2,4-dienoyl CoA reductase) are enzymes with 4Fe-4S, FMN, and FAD prosthetic groups, and interact with NADPH as well as substrate. Members of this related protein family occur in the vicinity of the putative mycofactocin biosynthesis operon in a number of Actinobacteria such as Frankia sp. and Rhodococcus sp., in Pelotomaculum thermopropionicum SI (Firmicutes), and in Geobacter uraniireducens Rf4 (Deltaproteobacteria). The function of this oxidoreductase is unknown.	1.86051e-146
NZ_CP048429.1|WP_062520823.1|3009013_3010654_-|response-regulator	gnl|CDD|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	7.94081e-42
NZ_CP048429.1|WP_062520827.1|3013497_3014331_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.27109e-71

Protein sequences

>NZ_CP048429.1|WP_062520813.1|3000617_3002744_+|class-I-SAM-dependent-methyltransferase
MLKSLQAIEAYREDGKLSGGNYPWLDYIVQAEETIVNLERVDSLQELEYINPVLEYVERSLRLLDSLPLSYWIKELVEETLIWAETAKGGTLRQRRLWQAEGINIFVHNIGSAELYLRHTGGTGVGAYGGQAVPALEPGGTEAAKQEIVHRLIGTHGLIGQQIRGEVPPSVNRPLAALVEEGLLTADELERLLFALNHCIISAVSPELWQAVRTEVMGLIAVISSGDLHAGVPMKERLRRMRAGAIAGGEDYDAEWSSLMEEGFNPDILEPMQPITFWYVESALQTFSLEQFLKIMALTACGSKLSGLNHISYEAVMNSIYYDYKGTKKINVYKKRIIEKYLSGLAWEDILNGATPSGNPHLVHRLRREEHLPDTLFFHFEFSPAAEKLIEFCMEAEKSALYERAVLMLFDLFELRRDAFDRFHNEDTYLSQMNETADYKAVILEYVTGRKVLDIGPGGGVLLDLIEERLPGVIPVGIDISSNVVEALRQKKQREGRLWEVLQGDALNLKDFVEPGTVDTVIFSSILHELYSYVPLNGTKFNHATVAAALVSSFEVLADGGAIIIRDGIMTEPLDQRRRVRFLEADGMAALERYAKDFAGRVIQYERIDEQEVLMPVNDAMEFLYTYTWGEEAYIHEVQEQFGYFTPSQYKTFIQQTLGGQAKLEVFRHYLQEGYTDALRGRVMVMDESGQEVPLPDSTCFIVIRKKG
>NZ_CP048429.1|WP_062520811.1|2999714_3000515_+|hypothetical-protein
MNVSRSIQRPPFPVADHDRQQRRGTEQNPGSNMRIPGKPESKLLDHLNKQKQSLMDRRSEYLGNALKRGESQEAIQAELASMDEQIQQLEQQIQKQAIDNQSKTKGLDEDNPKKKDGTLQESWSPENQTPEQQQLANTTYTMNGVISAGNDLKQSGAVRIAQTTLRTEAKSWENSNSGKSAGLLQKVTNLDQKLISIAKDIQEQMKENVQSAPSPVIRDESPANVQDKEDPAADTAEGSPSRPELEIYAEANKTTVPPGSQIDKVV
>NZ_CP048429.1|WP_062520809.1|2998724_2999600_+|radical-SAM-protein
MKTFKKVYIEITSVCNLACSFCPPTERQKNFMKLDTFNTILDEIKPHSNHIYLHVKGEPLLHPKLGELLDAAHAKGFKVNITTNGTLIHKAGPKLLGKPALRQMNFSLHSFDGHAGSENREGYVSEIISFVREVTAQGVIVSFRLWNLTEDNRTNLEKQRNRETLALLKEAFNLDFNIEEKVVPGSGVKIAPRVYLNQDHEFRWPALSEPEDDGKGFCHALRSQAAVLVDGTVVPCCLDGEGVINLGNLHEKPFSEIIEGERANNLFYGFSRREAVEELCRKCGYRQRFGT
>NZ_CP048429.1|WP_062520807.1|2997698_2998685_+|Gfo/Idh/MocA-family-oxidoreductase
MTIRFGVIGTNWITDRFIQAGLENEEFILTAVYSRTEEKGRVFAAKYAGASIYTNLEEMVAGGEVDAVYIASPNSMHAEHALVCMNHGKHVICEKPAASNSAELRAMIEAARSNDVLFMEAMKSTFMPNFGVIKDNLYKLGQVRRYFAGYCQYSSRYDAYRQGTVLNAFNPAYSNGSLMDLGIYCLYPMVALFGIPESVRAVGLMLASGVDGEGSIVMRYPDMDAVVMHSKIADSYLPAEIQGENGTMVIDKINQPYQVKIHYRDGTVEELTLPQVFEPMYYEVEEFISLIKNGQRESHVNSHANSLAVAEVMEEARAQIGLRYASDL
>NZ_CP048429.1|WP_062520805.1|2996758_2997532_+|SDR-family-oxidoreductase
MTNLFDLTGKKAVIAGASSGIGVQFAEMLAGQGADVAILARRYDKLAAVAEEIGAKYPERRMIPIQCDVRKEDQIIEAVRKVMDAFGQIDILLNNAGVVDAVPVEALEEEAWDRVLDTDLKGVFLMSKHVIRQMKERKYGKIINTASMLGLTASASVPTHSYNAAKGGVIHLTRGVAATYAKYGITVNAIGPSLFRSEMTENTLFTEQALKMYNAVCPMGRPGNPGELNGAVLYFASDASSYTTGQTLFVDGGWTII
>NZ_CP048429.1|WP_062520804.1|2995896_2996706_+|acetoacetate-decarboxylase-family-protein
MGSFVKRITDIQKYGGKPTTFYDAEMLTVYWETKPEIIARLLPKPLKPASRPLVNAFVANYPATNFCPPYREAGLFVLADYNGQLGNYCLSMPITSDIGMAMGREVCGLPKKMADISLNHAEGFMGGTISRHGIDFVSMEARIEDKFNDSAAGEILDEYYGKDIPLYNIKYANAIDGSGFDLMPTLVTQRLVSDVKVYKAAEAAITFQDSPHDPWSELEVVNMLGAVYTVSTNVLEKGRVLELLNPMEYLPYCYLRWDWWENKLQSGSL
>NZ_CP048429.1|WP_062520802.1|2993932_2995873_+|FAD-dependent-oxidoreductase
MKYEKLLAAGKIGRLELKNRIVMPAMGTSLAAASGEASDEMIAFYEERAAGGCGLIITEITRVDNETGVGTPNQLNASDLLFVPRLEKLARAVHRHDSKIFLQLQHPGRQNHGRLIGGRQIVAPSAVMSSAIGEMPRELSTQEVEELVRKFVFAAHIAKTAGIDGVEIHGAHGYLVGQFLSPLTNLRTDKYGGSLEGRMLFLTEIVLGIKQACGAGFPVSVRIDGDEFVPGGITLDEALETAKHLESLGVDCINVSSGTYESSNTIIEPISYPQGWKKHLAAAMKQAVQIPVIACDVIRKPEFAESLLQEGNTDFVAVGRAQLADPEWGSKAAAGKEAEIRTCISCLYCIQEVMECKVIKCAVNARAGRELELAGPAKDGGSRAVAVIGGGPAGMEAARILAQREFKPVLFEARDVLGGSVELGSRPPLKEKLNWFLGNMQHQLEQLEVDVRLSTKPTLDQLRELEPYAVVVATGAQPVIPAIPGVNKAAVCTVVDVLGGKAVIGNQQAVVIGSGMTGLETAEYLVDRGNRVTVVEMQPRIGPDAYLPNLIDIVTRLKKSGVELLASTKLVEVKDGSIVLENTSTGEVMEREADAVVLSIGVAPESSFTEELKQALPNVKVIGDAGRPGRIGQAIQSGFETAYMLR
>NZ_CP048429.1|WP_062520800.1|2992517_2993801_-|hypothetical-protein
MDVSLDELRPDQIEQEHYTASLFTAYISGAGLSAIVQTAAALLRNPVIVFDSSFKIVAHSDPDEITDYLWSGNIRKGYCSYDFIAAVNKLDSVRRGKQTGGSYEVTCEETANTKLISKIKIGSKPVGNVLLLGCKHPLRPQDKELLAITATILGEEMGKSSYYRNTRNMKVEDFICGLLDQQFQDSHIIRDRMKSAGLRFGQHLLVLLFDLSRYENSGHYDDFLRERLQQLFPGSPFTYYEGHIVMIHDGVLSKEHIPAHLREFLAQSGIMLGVSSRFSSLSQCRTHFLQSLSAIRIGGIVSPEQHLTFYSDIRLYELLSADALSMEEPGYRDPELLKLQEYDAAHQSNLYHTFFVYLKNNRNMQLTAEELYIHRNTLRYKLDHISRLLDTSFSDSEKMLGYYISYKIADYCQKSRKRQNPSSLPMR
>NZ_CP048429.1|WP_062520798.1|2991031_2992420_+|threonine-synthase
MEYISTRGNVEAKGFIDTVLMGLADDGGLMVPFQIPVVSPEKLAEWRSLSFQELFLEIFSYYTNDEIPYDDLKEMVYTSYANFRAPEVTPLHQVNDSLYVLELFHGPTFAFKDVALQFMGELYSYISRKRGEVIHILGATSGDTGAAAIQGVRGKEGIKICILHPHGKVSKVQELQMTTVDDSNVLNLSVEGNFDDCQKVIKELFADLDFKGKYHLRAINSINFVRILAQTVYYFYAYLQIEGSDKKKINISVPSGNFGNIFSGYLAKKMGLPVNKLIIATNENNILERFVNTGEYKPGSFTSTYSPSMDIQVASNFERYLYYLVGGDAEKLSAYMLELQTEGKITIAGEALQQVQADFAALGVRNQQCLDTIGKYNKEYDYLLDPHTACGIAAYEQFNGAGETAITFATAHPAKFDEAIALVDIKQEFPEQISALFSLPQHQTVVKHDKDVIVRELQAFYE
>NZ_CP048429.1|WP_062520796.1|2990358_2990853_+|CYTH-domain-containing-protein
MDMEIERKFLLPEYPERLIQEGQVQVLTRHSIDQTYLAIEDGQELRVRKITDLDSGEITYTHTFKDGKGISRKEIEYSISEGLYNQMIEAVKAVPLVKTRITGIWNGTTIEIDLYTQLELTVVEVEFDSLEAAESFVAPEWFGKDVSVEKKYSNKTVWKELQNK
>NZ_CP048429.1|WP_062520815.1|3003405_3004323_-|AraC-family-transcriptional-regulator
MDRTSQRLLKEDRVHGDVMFPLAAYWIELPAGTPVLDTHWHEEAEFFLLLEGEIMFQVDTDYFPLRPGEAVFIESGDIHAAYALKDSPCRFCALVFHPDLLASAQYDTIQQTVILPLLEKRQSFPRHISPDIPWQLELLRHLERMMEAYDNKMPGFEAFMKGTLLIMLSQIAIEGRSVNRSQSESADTTKINRLKKVILYIQDNYQEPIRTRDLSELIPMSEGQFCRFFKAMTRKTPVDYINSYRIRQAADLLQQTERKISDIALEVGFDNVSYFIKVFRKAMKCSPSEFRKGQGQVSAQGQLYP
>NZ_CP048429.1|WP_062520817.1|3004549_3006871_+|alpha-xylosidase
MKFTDGLWLVRDGININGAVQNYVVEKTSEGLTAVTQTTPITGRAATLNSTLLTVKFHSPLPGVVGVKIIHNDGVVDHGPAFELTKGTGDHVQIEETETQTVLISGGLRVVINKGTHWSVDFYRGDERITGSGFKSMAYITDQDGNTFMREELDLGVGEFVYGLGERFTAFVKNGQVVDIWNKDGGTSSEQAYKNIPFYVTSKGYGVFVNHPELVSYEIASEKVKKAQFSVAGESLEYFVIEGPSIKEVITKYTSLTGKPALPPAWTFGLWLTTSFTTDYDEATVNSFVEGMAERDLPLHVFHFDCFWMREYQWTDFQWDPRVFPDPVGMLKRLKEKGLKICVWINSYIGQRSPLFEEGKKNGYLIKKANGDVYQTDLWQAGMGLVDFTNPAACEWYAGYLRDLVDMGVDSFKTDFGERIPTDVVYFDGSDPQKMHNYYTQLYNKVVFEVLEEKLGKNEAAVFARSATAGGQQFPVHWGGDCYADYESMAESLRGGLSLGLSGFGFWSHDIGGFENTAPAHVFKRWLAFGLLSSHSRLHGSTSYRVPWAYDDEAVDVTRFFTKLKCSLMPYLYDVAGQAHEQGWASMRAMVMEFPEDPTCEILDRQYMLGDSLLVAPIFQENGEVKYYLPAGRWTHLLSGETVQGGSWRKETYDFFSLPLFVRQNSLLATGSVDTRPDYDFADGVKFGLYSLEDGAVTTATVRDIKGAPELAVKAERKGSTISVTAEGSGKAFTLAVKDLGTIASVDGAELADASTVSVKAGAASVSFTITLN
>NZ_CP048429.1|WP_062520819.1|3007138_3008320_+|SGNH/GDSL-hydrolase-family-protein
MHSQENQAGVFSQSEYTSAMALSTAANYIMNWAEPFTHTYRTYIRLRENGRLALKFWHSNAVDSTWDMGLESRGSEPGGKWSIEAAYIADGGLEPDGTVIPGTQVPVTFSDEAEKQVAPGESFWSDEAVLDLPEGHYLAFTWTLRTAAPGKSFPYNVEGMLVTAYDTPGNHAGQESNAAFSESDKLLVLPSYIGYKKKVHKKLVFLGDSITQGVRTAKDGYSYWAARIAEGLGTGYGLWNLGSGWGRAYDAATDGAWLNKAKQGDEVLIVLGVNDLDIGKRSAAELLADLSHIVSLIKEANPEAGIILGTVPPFNFEGEREEAWRRVNAQILTAPPAGVNRVFNIAAVLSMPAPLDHRVRAEYMSNTDDPHPNGTAGRAVADAFLEWYRETVG
>NZ_CP048429.1|WP_062520821.1|3008408_3008717_+|hypothetical-protein
MGIQMASQQKVLYQADNNYVQNLTSVRKHLHSICRQHANQFVRVQTLDGQVVTGRILGCDRGLFYLGVKNYGGQRSFFGSSSDEAILTLVLYELLVITLLYT
>NZ_CP048429.1|WP_062520823.1|3009013_3010654_-|response-regulator
MKALIVDDEARVRKAVRLLVDWDAHQIREILEAGNGNEAIELIRKEKPALVIMDMLMESGNGIELMSWVNEFAGNTKFIVVSGHNDFDFVRQTVRHGGIDYILKPIEPEMINNAVAKAVTAWRSEEEERSHRQRQSIRLNEIRPIYGEKLLSALIDDPINAEASLRRLWDDGIIPHTATVSRLILVQTDPGNNPLIKRFGGDSELLYYAIVNICNEFLHLQGKGIAFRYWGGPPEIAIILWDVQESVAELINRINQGIYMTLQFRMHFGISSVGALPGGLPAERTEAAEALLRRNLLRHEDYCHFPSSSSSSKTVVTGSEPPIIFADVQEEWRMAVISGNPEVLSAAARHWTQELSRRGVVTPEMLNSWKADALLFRSRLVREALGGQADSALAELERADSLNPAPLPSGYSFSLFAWRDWSFAVLQRLSQELTARAVKERNPMTEIVKYIEQNYPSDLSLQEVAGKFYVSREYISRKFKQEYGINFSDYIGSVRIEKAKLLLQNPNLKLSQISEMVGFHDVKYFSKVFKKQVGLSPKDYRTRITL
>NZ_CP048429.1|WP_062520825.1|3010650_3012483_-|sensor-histidine-kinase
MKWNSIRTKLIVFLLLPTLVCIIATMFISYSYTTKSLRTRAVDENTNLLYQGSKNISSFIQDVNRLSLTIYSDSDFYRQLEAGYDDMSAGIRIYSSLNYILTSMPDIFQVYLYRVKDSKATLLSHNATPKRWQGIPPYSDSRITDAYPLSIQSTHISNTYGLNSPIPQLTPEPVFTLHRRIERIPSTEALGYLSIDVKLTAFTDIMNQLYEQDKENIYLVDDSGTIVYSHDEADLGKPLNASWYNKPIAGNGLSQGYFEKDGAVFIYQKIDSPGLNWTLVKQIPVSYLFREAKEAARINILLLVVLMLMIIALTILISFRITAPIKQLTRYMNQVQTGNLEIDIRPAGKDEIGLVTERFRSMMDTINNLILREYRLELSNKTNELRALQSQINPHFLNNTLQIIGTLALELKVPQIYALLSALAKMMRYSMYNDEKIVTVQDELDHVKAYVELQKERFENKFTFRYDMEESLLKALMPKMILQPIVENYFKHGFNLARTDGLIEIKAARLASGRMEIAIRNNGSSIPAAKLEALREELLHPGRLDIDTLKVMDSKDSKRDAPGARIGLPNVLARLRLVCGDSAMLTVDNDKAGGVIVRLEIDIVVESEAI
>NZ_CP048429.1|WP_025705410.1|3012616_3013498_+|sugar-ABC-transporter-permease
MRGSKLSQLGQQTFFVGPALLFFTLITIIPFLMGMYYSFTDWNGVSGNVSWVGADNFTAIFTNDPDFWSSFWFTVRFTVLGVVLTNIVGFFLAYFLTKPLKTRNMLRTIFFMPNVIGGLLLGFIWQFIFIKGFATMGDITGWSFFNLPWLGDATTGFWAIVMVFVWQSSGYLMVIYIASLSNVSKEVLEAAEIDGASRMQVLRSIIVPLIMPAVTIGLFLAISWSFKMFDLNLSLTKGGPFKSTESVAMNIYNEAFLNNRYGLGTAKALLFFLIVAIITVIQVRVTKSKEVEA
>NZ_CP048429.1|WP_062520827.1|3013497_3014331_+|carbohydrate-ABC-transporter-permease
MKAKSKGRWNIGIEVLMILLALLFLSPFYFLLANSVKSFGEILSNAASWPQEFMWSNYSNAWKLARFSEAFRNSLIVTIISVVLISLFSAMAAYRMVRANTRFNQILLLLFVAAMVVPFQTIMIPILKVVNILGVNNSFAGLIISNLGLSIPMAIFLFHGFIKSVPLEIEEAATVDGCNPISAFFRIVLPLLKPMLMTIIVLNALGIWNDYLLPSLILQAPGLRTIPLATFSFFGQYTKQWDMALPALTLGVAPIVIFYLFMQRYIVEGIAAGSVKG
>NZ_CP048429.1|WP_082722549.1|3014391_3015699_+|carbohydrate-ABC-transporter-substrate-binding-protein
MMKKRSALMLSSVMLMSVMLAACGGNSNNTASNNASNGSAGNTSGAVKTVKIFQFKTEIVEGLNELKVEFEKEHPSIKLDIQTVGGGADYAAALKTKFASGDAPDIFSNGGYAEMDLWGDKLEDLSDQPWVKDLIPLAAEPMTKDGKTYGMPMNLEGIGYVYNKDLFTKAGITETPKTITELEEAAKKLQAIDVTPFGNAYQEWWLLGNQGISVAFAQQDNVDEFIKGLNGGTASIVGNPVFKDWSNLLNLTVKYGQKNPLTTDANTHLAMFAKGETAMMQEGNWAQTLVDNITPNMNIGMFPMPINDDPAKNDKMTVGIPANLVVNKDSGSKEEAKTFLNWLVTSDMGKEYITKKWKFIPALKTIEATPEDIGALGSDVWKYVQDGKVYGLQSSKFPDGVTQEFASVIQELIAGKTDEAGWEKGMQAAWDKLKK
>NZ_CP048429.1|WP_062520829.1|3015784_3016015_-|hypothetical-protein
MENKNWCFKVPGDPDGREKVINTSEVKSVYDLLDLLHRDELQGPQKKQAAGLKDNPQAVLLPFISRMMKKRRHPSA

Crispr_ID: NZ_CP048429_18

• CRISPR_ID: NZ_CP048429_18
• CRISPR_location: 3155464-3155649
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers
• Cas_protein_info: WYL

Consensus repeat of NZ_CP048429_18

Consensus_repeat	Method
AGCAACCCCGGNNNCAAC	CRT

spacers of NZ_CP048429_18

>18.1|3155482|30|NZ_CP048429|CRT
CCCGGTGCAAACACCGGTAGCAACGCCGGT
>18.2|3155530|18|NZ_CP048429|CRT
GCCGGCAGCAACACCGGT
>18.3|3155566|30|NZ_CP048429|CRT
ACCGGTAGCAACCCCGGTGCCAACGCCGGC
>18.4|3155614|18|NZ_CP048429|CRT
ACCGACAGCAACGCCGGT

CRISPR arrays and Neighbor proteins around NZ_CP048429_18

CRISPR arrays

The CRISPR arrays of NZ_CP048429_18

>merge|NZ_CP048429|18|3155464-3155649|CRT
GCCAACACCGGTAGCAACCCCGGTGCAAACACCGGTAGCAACGCCGGTAGCAACCCCGGCAGCAACGCCGGCAGCAACACCGGTAGCAACCCCGGTGCCAACACCGGTAGCAACCCCGGTGCCAACGCCGGCAGCAACCCCGGCGCCAACACCGACAGCAACGCCGGTAGCAACCCCGGCGCCAAC

>NZ_CP048429|18|1|3155464-3155649|CRT
GCCAACACCGGTAGCAAC	CCCGGTGCAAACACCGGTAGCAACGCCGGT
AGCAACCCCGGCAGCAAC	GCCGGCAGCAACACCGGT
AGCAACCCCGGTGCCAAC	ACCGGTAGCAACCCCGGTGCCAACGCCGGC
AGCAACCCCGGCGCCAAC	ACCGACAGCAACGCCGGT
AGCAACCCCGGCGCCAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062523451.1|3146781_3147975_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NZ_CP048429.1|WP_062523447.1|3142122_3142896_+|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl|CDD|377136
NZ_CP048429.1|WP_082722662.1|3156308_3157871_+|glycosyl-hydrolase	unknown	unknown	gnl|CDD|366944
NZ_CP048429.1|WP_062523453.1|3149211_3150312_+|glycosyltransferase	unknown	unknown	gnl|CDD|340833
NZ_CP048429.1|WP_062523459.1|3163096_3163801_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062523457.1|3160797_3162273_+|potassium/proton-antiporter	unknown	unknown	gnl|CDD|235410
NZ_CP048429.1|WP_062523454.1|3150316_3151657_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|223936
NZ_CP048429.1|WP_062523450.1|3145940_3146795_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133005
NZ_CP048429.1|WP_062523456.1|3158075_3160622_+|hypothetical-protein	unknown	unknown	gnl|CDD|366285
NZ_CP048429.1|WP_062523455.1|3152074_3153448_+|cupin-domain-containing-protein	unknown	unknown	gnl|CDD|273648
NZ_CP048429.1|WP_062523449.1|3144324_3145704_+|oligosaccharide-flippase-family-protein	unknown	unknown	gnl|CDD|240533
NZ_CP048429.1|WP_062523452.1|3147968_3149111_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NZ_CP048429.1|WP_062523463.1|3166358_3167324_+|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl|CDD|225253
NZ_CP048429.1|WP_062523462.1|3165442_3166126_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062523448.1|3142892_3144359_+|O-antigen-ligase-family-protein	unknown	unknown	gnl|CDD|377422
NZ_CP048429.1|WP_062523446.1|3140779_3142126_+|O-antigen-ligase-family-protein	unknown	unknown	gnl|CDD|377422
NZ_CP048429.1|WP_062523461.1|3164571_3165258_+|M50-family-metallopeptidase	unknown	unknown	gnl|CDD|315961
NZ_CP048429.1|WP_062523458.1|3162512_3162968_+|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NZ_CP048429.1|WP_062523464.1|3167577_3168567_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223521
NZ_CP048429.1|WP_062523460.1|3163832_3164300_-|hypothetical-protein	unknown	unknown	gnl|CDD|275056

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP048429.1|WP_062523463.1|3166358_3167324_+|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	7.3e-33	109.1	0.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062523451.1|3146781_3147975_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.83568e-66
NZ_CP048429.1|WP_062523447.1|3142122_3142896_+|WecB/TagA/CpsF-family-glycosyltransferase	gnl|CDD|377136	pfam03808, Glyco_tran_WecB, Glycosyl transferase WecB/TagA/CpsF family.	1.20522e-85
NZ_CP048429.1|WP_082722662.1|3156308_3157871_+|glycosyl-hydrolase	gnl|CDD|366944	pfam02156, Glyco_hydro_26, Glycosyl hydrolase family 26.	1.71933e-49
NZ_CP048429.1|WP_062523453.1|3149211_3150312_+|glycosyltransferase	gnl|CDD|340833	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbaZ in Salmonella enterica has been shown to possess mannosyltransferase activity.	2.40317e-143
NZ_CP048429.1|WP_062523457.1|3160797_3162273_+|potassium/proton-antiporter	gnl|CDD|235410	PRK05326, PRK05326, potassium/proton antiporter.	0
NZ_CP048429.1|WP_062523454.1|3150316_3151657_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl|CDD|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NZ_CP048429.1|WP_062523450.1|3145940_3146795_+|glycosyltransferase-family-2-protein	gnl|CDD|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	3.0266e-62
NZ_CP048429.1|WP_062523456.1|3158075_3160622_+|hypothetical-protein	gnl|CDD|366285	pfam00754, F5_F8_type_C, F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.	2.76766e-16
NZ_CP048429.1|WP_062523455.1|3152074_3153448_+|cupin-domain-containing-protein	gnl|CDD|273648	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	7.69428e-73
NZ_CP048429.1|WP_062523449.1|3144324_3145704_+|oligosaccharide-flippase-family-protein	gnl|CDD|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.64351e-34
NZ_CP048429.1|WP_062523452.1|3147968_3149111_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	4.93156e-52
NZ_CP048429.1|WP_062523464.1|3167577_3168567_+|ABC-transporter-ATP-binding-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	0
NZ_CP048429.1|WP_062523463.1|3166358_3167324_+|WYL-domain-containing-protein	gnl|CDD|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.99205e-29
NZ_CP048429.1|WP_062523448.1|3142892_3144359_+|O-antigen-ligase-family-protein	gnl|CDD|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	1.39018e-09
NZ_CP048429.1|WP_062523446.1|3140779_3142126_+|O-antigen-ligase-family-protein	gnl|CDD|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	1.27875e-09
NZ_CP048429.1|WP_062523461.1|3164571_3165258_+|M50-family-metallopeptidase	gnl|CDD|315961	pfam13398, Peptidase_M50B, Peptidase M50B-like. This is a family of bacterial and plant peptidases in the same family as MEROPS:M50B.	2.74841e-28
NZ_CP048429.1|WP_062523458.1|3162512_3162968_+|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	1.84601e-56
NZ_CP048429.1|WP_062523460.1|3163832_3164300_-|hypothetical-protein	gnl|CDD|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.0002961

Protein sequences

>NZ_CP048429.1|WP_062523455.1|3152074_3153448_+|cupin-domain-containing-protein
MKLVLLSGGSGKRLWPLSNDSRSKQFLKVLQSPAGEPESMVQRVWRQLQETGMADSSYLATGRSQVEMIQSQLGAEVPIIVEPERRDTFPAIALTAAYLYSMAGVSPSETVAILPVDPYVEASFFETVVQLEATMQESGANLALMGVVPELASEKYGYIIPTSDEAAASGYMQVSHFQEKPDRAQAEELISRGALWNCGVFAFRLGYLLDILQRKGLPLNYEELQKQYKLLSSISFDYEVVEKEENIVVQPYAGFWKDLGTWNTLTEEMSSNHVGKGFVTADSEGTCLINELDIPVTVIGAKDLIIAASPDGILVTHKTESPRIKEVLKSFEQRPMYEERRWGHYKVIDYVKYDEGNEVLTKRIFISEGKNISYQLHHKRSEIWTIVSGEASIVLNEKMHNVKAGDVVRIPEGTKHAILALTDVEFIEVQTGSELVEEDNIRITLEWEDIALQQFIS
>NZ_CP048429.1|WP_062523454.1|3150316_3151657_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MKLAVIGTGYVGLVSGVCFTLNGNHVICVDKDEEKIKKLSQMESPIYEPGIEALIEMNLREGRLSFSSDLHESVRRSDIVILAVGTPSLPGGEADLRYIEGAATEIAQAMEGYKIVMTKSTVPVGTNEKIRKIIASHTNHPFDIVSAPEFLREGSAIQDTLHPDRIVIGLDNPELEPAMRQLHQGFTENVFVTDIRSAEMIKYASNAFLATKISFINEIANICEKVGADVTEVAEGMGMDRRIGSTFLQAGIGYGGSCFPKDTNALIQIAGNVDYEFKLLKSVVEVNKDQRFMIISKLHESLGSLRGAVIGIWGLAFKPNTDDVREAPAREIVESLVAEGATVKLYDPIAAENFRQQYDHPQLRWCGLPEEAAEGSDAVCLLTDWSVFKDIDLHKLAESMRRQVLIDGRNVYSKEQIEGTGFEYHSVGRPQMGGLSGYSPSVAGAI
>NZ_CP048429.1|WP_062523453.1|3149211_3150312_+|glycosyltransferase
MKIAIAHDYLIQMGGAERVVEVFHHMYPDAPIFTTVFNGSRLTENLKDADIRASWLQKIPGVKTNFKGVLPLYPMAIRDLDFRGYDIVLSSSSAFMKSIQVPESTFHLCYCHTPMRFAWDYDTYMERQSNSGLFKRLLKVYMQRLKNWDQRTSKNVNQFVANSSVVKTRIQNYYHRDADVIFPPINTARFSSSSSIGDYYLIVSRLVSYKRIDLAVEAFNRNGLKLFIVGDGPDRKRLEGMAKDNVSFLGRLEDAEVTGLMSKCRAFIFPGEEDFGITPLEANAAGRPVIAYQAGGALDTIVPYVNGVFFQRQEVDDLLKAIYEVESYAWDIGQIMGHARKFDEQAFMVQFKQYVEQAYVNFLKGG
>NZ_CP048429.1|WP_062523452.1|3147968_3149111_+|glycosyltransferase-family-4-protein
MLKVAYIDHTAKWSGGEVALFNILTNIGNQIEPLVILAEEGALAERLREKGIDVRVIPLDESIRNRGRNAVNLGAPAAALGLLAYGRKLAPILKQEKVDCVHTNSLKSAFYGAVAAKKAGVPLIWHIRDHIGAPYLKPVVAKAIRLLSRLLPNGVIANSHSTLNALELPRTKKTLVVYSAFAKAIGEGIGKREQQKDFNVLLVGRLAQWKGQHIVLEAAKAFKNDSRVKFWLAGDALFGEEAYKNELIQKMQQDKLTNVSLLGHVEDIQGLMSKADLLIHTSITPEPFGQVIVEGMAAGLPVIASNEGGPVEIVVPGVTGLLIQPGDPVVLADSITWMLNHPEDRRRMADSGMKRVKEHFVIENTVKDIVDYYKGLLAAT
>NZ_CP048429.1|WP_062523451.1|3146781_3147975_+|glycosyltransferase-family-4-protein
MPYSDGLNIMTTGLSWPSLQPGGLNTYFKSVCEQLSSRNKVHALICSQETPSTPKELIIHNAGDPKQTIWKRKDAFQRKAADLMGNGSGRIDILYSHFAPYGIGPAIEAKKRGIPVVMTFHGPWNEEMKIEGQGIKHRVKTTIAKSIEHKAYKLADKFIVLSEYFRDMLHSLHGVPLHKITVIPGAANVERFVPAANRLAIRRTLNLPEGATTVLTVRRLMNRMGLLQLLEAWKQVSERFPNAILLIGGKGPLRGELEEKISDYGLANKVRLLGYIPDHELASYYQAADMFVVPSQALEGFGLITVEALSSGLPVMATPVGGNKEILQGFRPELLFKGSTSDDMAEGMIHMLSNRKLLPGRDECRNHVLEKYTWQHVGDQVESVFLETLGKGVAAGC
>NZ_CP048429.1|WP_062523450.1|3145940_3146795_+|glycosyltransferase-family-2-protein
MDSVKSVLGGPGSYPISAVIIAQDDEVRISKAIQSCRLFADEVVVIDGGSKDGTVQLAESLDCRVFVNPWPGYAKQREFGVERAVHDWVFLIDTDEVVSEELAQDILDRKPGLTDRAVAFSLYRIGDFLGRWLDKGEYLVRLYNRKEYGIRNSLVHEMPEVSEEKTVKLNGVLWHQGFRSINDHVARFNKYTDLEAQAAFASGKPFKISHLLLRPPARFLQKYFLHGLFKKGISGFAVSIFWVMYEFMVGFKHYELNSSGRLARHNALGQAEKEKKGERSYAVQ
>NZ_CP048429.1|WP_062523449.1|3144324_3145704_+|oligosaccharide-flippase-family-protein
MQPLNAKSLPTNTVWSSLRRFTKSKDNSSAAVKTMFVSVLILLVNMLTGVLTARYLGPTGRGEQTAMVNWSQFLAFSMSFGIPSALIYNAKKNPEEAGVLYRMALLIALAFGTLAMIVGIVVLPYWLNSFSPNVVLFAQCSMILCPLIVVSQINNAAFQFRGDYKTFNWLRYLLPLLTLAAIGILILTRSINPFTTALAYLVPSVPIFIWMTITLLRTYRVKMNNAYLNFKRLFTYGLGSYGNDLLGQFSYYIDQIIIAGLLRPADLGLYAVAVSLSRMVNFFSNSITVVLFPKASELSKDQAIALTFKAFRISTTCTLLGSLFLMLVAPFVIPLLYGKDFNTALTVFRLLLLEVTISGGTLILAQVFMALGKPKFVSILQGVGLILVIPLLFLLVPKFGLFGAGVAMLSSAVLRFLFIILNIRYNLKVKLPRLLINGDDIQWMKTTMNSYIRKKPMDT
>NZ_CP048429.1|WP_062523448.1|3142892_3144359_+|O-antigen-ligase-family-protein
MNVSLPSMKSAGTLLLVCGICLGLPLIIGFASAKLSSSNSLQGVILAGILFPAFLLALLKPKALIAYTLLVWAVAPELRRIADWSEGVYHSVSLLSLAPLLTGATLAIPVLKEIHRIRKSSTRIILLFSVALAYGALIGLAKNGIGSVYDLANYIVPLLLIPFFAVTRFRPKDIDRLLYAFANIAVLVSIYGIIQYLTVPPWDAFWMKNADMMSIGTPYPLEIRVFSTLNSPGPAATFLVFALVPMILEKRWQGTLRWIGVMLVVICLLTTLVRSAWLVMLVMLLVYIASSPSKGKWKALLQLVFVAAALFWIVPKLPGAEGLVARMETLTSVQEDHSYNERLSLWQNMLPMVAANPVGQGIGSVGQGTKIGNGGELGEYGNMDNGVIALLLTFGVLGALFFFGALGAVIKQIVVRVTSRDSLQPYARLSLAAWMGAVISLVSDNGFPGLKGYLVWMLIGLGLGAKEIIESRKKGTPHAAIEREITSH
>NZ_CP048429.1|WP_062523447.1|3142122_3142896_+|WecB/TagA/CpsF-family-glycosyltransferase
MNQVNMFDVNFDNYDFMDLLDYIDKTIQERSQSYILTCNVDHVIKLRKDKEFQTVYSQAGAVVADGMPLIWASKMLGKPLKQKVSGADLFSRLGNAFEQRKYRLFFLGSAQGVPEQATKNLKAAYPGMNIVGCYSPSYGFEHNDEENQRIIKMLTESQPDIVFVGVGAPKQEKWIYRHYNSYRAPISIGVGATFDFLSGSVKRAPNFMQKTGLEWFWRLSQEPGRLWKRYLVDDAQFLVLLLKELRKRDKVKGGRRE
>NZ_CP048429.1|WP_062523446.1|3140779_3142126_+|O-antigen-ligase-family-protein
MMNFEWGSKMNVLPYGMLYLMSALFLGAAVIYQPVIAVAIVLLIMLLVVSISRPELISYFVLLTTAISINFLYPGSMFGVEILSLYKLVILMLLVPCILVNGLKFRLSQPLWAMVGLLFITFGSSIWLPEMSGSIAVKAFIGLSLPFVFLLINWKKEVAERQIRIITMLPLVSVLAGIVLQVVHLHSFLDVEFTGAVRVQGANIPAHLAMLAFMGVGIAFIEIKRSTQHIRFFYTMLALNFLILIGTGTRGPILALLLMVLYYFYDISRQYLKGRTQYLIPLLCSVILIFSAVYLQLDNIKKRSFERTTDTAVDLSGRAEAWEYFLNKAADSPWSGRGLGAVTVANDGTLYKGFVVPHNEYIRFYFDGGYIGAILLLISLLAVFILVYRALAPPVKPYYLLFIAGFMIYSFSDNTLSTVQSIIPFCWYLNCLYRSSQPTDSPQKEVIR
>NZ_CP048429.1|WP_082722662.1|3156308_3157871_+|glycosyl-hydrolase
MCELEATYGWREEITLNTYRKYRLFITMLPIIFILSLLPWSEARSLSIERNVIIPPEAVTPVNPSASQEAADLLDYLADLGGKGIISGQHDYLESPDEYNNKLKNATGEYAVLHGYELGAINNQSRGTIARQRQAVVDSAIQWHEDGGIVAMTFHQNLPGTSPEWANVHMSLSQEKFDAYVTPGTPEYKSLLASLDEIAVYLGELRDAGVPVLWRPYHEMNGNWFWWGQKDNFSKLWDITYDRLVNQHKLNNLLWVWNPNAPNEWADPYSAYYPGADKVDVLAADIYNNDYKQSYYEGLLELANGKPIGIGESGELPDPAILSQTQSKWVYTMTWGKMLTENNNLQKIRSFMTNQHTVSRQDYLQSLNTKTNNAAGIISKNGLKGQYFNNAELSGTPVLTRNDKKIDFNWHGDSPAAGVNKDSFSVRWTGKMKAVYSEEYTFTASSDDGVRVWIGDKLIIDSWKKQSGVSRVGSIQLTAGTSYNLKVEYYENRGDASIRLMWKSPSQKPGLIPQNALTLP
>NZ_CP048429.1|WP_062523456.1|3158075_3160622_+|hypothetical-protein
MSELSAANDAGPELPEGTTLWQFGRHDGSDAEFAETGAPDGDEVINVASTTLKASALQSIPSGLRGDTNPELRIKYKLDKIPENGVLFRVSILDAYKSVPQMSVFSNRQLSGIIQIAGIDGTDSKYNFRKTYELYIPKEQLVAGINELKLQTTRGMYSSDMEDKYNWWTWDNLSLEALKTPIKEPIHGSYTLTGTMVNNKQFYFDEGAVTHLPYIMKWLGVAYSGNIMRTSCASDVGRSCSNMEEYYKVLKDYNMQAVALYLYTGDIKLNEDGSLPETAEKKLTDYFEKYSPYFQYYEVDNEPGLFNRSKAVNLAIADWLNKKGKTIAPHLQTVAPGWAYWPDYSDDSCGNQKGTVRQCGDPDGWERDPEQRNELEEVTDLTNGHSYGESYIFSNGGSFTENLKTFGGAADGLGKKMLTTEFGTSDSHVDAYQYGASERTAAVFDRIMRAHIGYADMFVQHAAFFKNFSLFKYGFNLEDHDPVKTEIYYTKKGEDSRVSIMRRLDLAYATHGAPLSYEITNKEALADKLVYVRAVDTSTLEPLAGTGATSNKVLVNFVNFEETPQTVTVKVNMPKKTVYEGERFGNGDTYEEARSYVSGKSAAPTLEFNETLAPGEAVQYILEPSSEVADVAPQGLKAAAVKGPSVKLNWLEAPGASYEVLRADSPGSELKVIATGIKQTEYTDGKLQEGTLYTYAVRTAGSSVMSEKTQITATGLVPLDRSEWKVSSNVNTEASGPANAIDGDRRTRWDTGKHQASGEYIQIDLAGVHSVEAVDLDYTLSSYDYPRGYELYISDDAKSWNKIASGKGKLEKTKIEFPAVKTRYLRIVQTSSGGNYWSIHEMQVYSRE
>NZ_CP048429.1|WP_062523457.1|3160797_3162273_+|potassium/proton-antiporter
MTHLADNIILLLAALLLVGVLSTKFSTRFGMPALVLFIAAGMVLSRFVYFNNASLTQVAGIFALIIILFEGGMQTSIKDIRPIIAPALSLATVGVLLTTAIVGVFARFVLDVPWAESLLFGAIVGSTDAAAVFSVLGGKNIDKRLTSTLEAESGSNDPMAVFLTVSLIEWIQHPDTAIWSLLLSFVWEMGIGLVMGIAVGKLAVYLINRINLDSTGLYPVMAIGFAVLTYGLAAMVHSSGLLAVYVIGLTLGNSELMYHRTIMNFNHGFAWMMQIAMFILLGLLVFPNELADIAWQGLLLSVILMLVARPVGVFLSLLFARFSIREKTLISWAGLRGAVPIVLATYPLLAGLPQGRLFFNVVFFVVLTSAVIQGTTISPLASRLRLVGKDDAQPSLMELVALGKTDSEFNHIAIDQHMPIAGMQIAQIGLPEDILFTAIIRNKSIVTPHGSTVIEPGDTVYVLSPKSKRDEMRAIFRSGKGKVAESHLPIM
>NZ_CP048429.1|WP_062523458.1|3162512_3162968_+|DNA-starvation/stationary-phase-protection-protein
MSTQIKSHTELHAALNRQTANWTLLGVKLHHYHWYVSGPQFFTLHTKFEELYTEAATYVDDLAERLLAIGGQPASTMTQYLALSDLKEAAGGETAQEMVAQLVKDFAVVTEELKSTISAAEELSDQPTADLLIGIRNSVEKSAWMLNAFLA
>NZ_CP048429.1|WP_062523459.1|3163096_3163801_-|hypothetical-protein
MNIDVQDEGDSGSGQAVAFTVDENEEIHVLHPQQIIAYQGPSSGRADRLMDVKGMYRKRKLIRSDMTGPCRFVAALPPGYRVKTFQLDGKSDLLYDFRHLFFYSKGITMQTRVLSMKNMLVTRDVIKVKFSGPGSIGILTEGTVCEAELHPLDPLYVDAGSIIAYPENAKLELTVYGNHLASQHMSYHWKMTGHGPVMFQAGRQSRRFERDNNEDGIIKRFLREALPFGGVFIK
>NZ_CP048429.1|WP_062523460.1|3163832_3164300_-|hypothetical-protein
MKPKVKHTYTKLLCSVLMLLGLSVIFPAPAAKANYFSDLYNGLQNFSELPGEVNQLQESYRQTTEELQQTKEQLGQTLQQMADYQAQNAALQEQNRQLSQVVDELKNDRTARENYYNRIKVTVVTGLALVLGYFVLIRLLRLGMRHRSRKSDRLL
>NZ_CP048429.1|WP_062523461.1|3164571_3165258_+|M50-family-metallopeptidase
MNKWLKTLLFLAGSALLTRLIPFSSLFRNLDTMFHEFGHALVTLLLSGSVLRIELYADHSGVTYSAIEAGGKAVLVSLAGYTLASLFSLLLFYLYNKGRYRWGLLLASGVALVMLVLYVRGGFGMLWLGGFILLNLVMLFVWPKAGKYYYLFLAFLTLEESVMGSLFLVSAAAVTPGRAGDAANLARLTPLPAIVWALLFFVFSLLCAKWALGFFFKGERSRRSTASY
>NZ_CP048429.1|WP_062523462.1|3165442_3166126_+|hypothetical-protein
MQASFQPTFTWSQERIFAAGAQNVVLLIEWKGISNPEESRKRTRKVVAREIELRIWLEAHVTFNGCHGCNAETGEGRSILLKLGKLYSKARKYIALEFTMAAKPAGIHEALWLQWQYKQPPVERIRELPLKKLSMEYTHHTDVLSERCCFHVEKHLVLLKTEKLLEEVAVQRTKGNTQTEFEHLRRQADDLLLLAARSGDMQLVKEAETVYKQLDAESQVWWRTATR
>NZ_CP048429.1|WP_062523463.1|3166358_3167324_+|WYL-domain-containing-protein
MTDRLIRLMRIITLVQAKPGILARELAERCGNSERTIYRDMDALSAMHIPIIHLGHGKGYAFIGNFALYPLDWSEEESAAFSQLRGIMDDIKNILPPSFESAYEKVMAAAYKQKAEREETMETAKREAGQLWMERSGYQDDPPPFLTEVLNAIMKQNSILADYSENAYAERNIQIDPYCLVPLENRYHLIGFCHRFGIIRTFHLHGFSNVQPTNLWFSKEQFDLQAFMEQKWSLDRDSLQVEFKIRFSERMLDRIKYEDMFVKPNKVDLQTRCLHFKVAIEQDIGFVRWILNFEEEAEIMEPLYYREMLRNQLEKWLSLYK
>NZ_CP048429.1|WP_062523464.1|3167577_3168567_+|ABC-transporter-ATP-binding-protein
MVQPILKVEELHTHFFTERGEVPAVDGVDLYINPGEVLGVVGESGCGKSVTSLSILKLVPNPPGKIVSGRILLKGQDIVPLKEKEMRSIRGGAVSMIFQEPMTSLNPLFTVGQQIIETVRLHRGLSKKDARTHAVDMLRKVGIPRPEAIIGEYPHQLSGGMRQRVMIAMSISCSPELLIADEPTTALDVTIQAQILDLIRKLNEEQGTAVMLITHDLGVVAEMCQRVAVMYAGKVVEEGSVRDIFKNPLHPYTRGLIQSVPRMGETRERLYSIPGNVPILSKELQGCRFAPRCSHVMELCRQSLPQLKLQEDNHSCRCWLHDSQQEDAV

Crispr_ID: NZ_CP048429_19

• CRISPR_ID: NZ_CP048429_19
• CRISPR_location: 3375975-3376236
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP048429_19

Consensus_repeat	Method
AAAGTGGGTTACAGCACGGAATGAGAGGTAAAAGTACCTTTGATTTCTCCAAAAGTGGG	PILER-CR

spacers of NZ_CP048429_19

>19.1|3376034|43|NZ_CP048429|PILER-CR
TAACAGCACGGAATGAGGGGTAAAAGTACCTTTGATTTCTCCA
>19.2|3376136|42|NZ_CP048429|PILER-CR
TTGCAGCACGGAATGAGAGGTAAAAGTACCCTTGAATTCTCC

CRISPR arrays and Neighbor proteins around NZ_CP048429_19

CRISPR arrays

The CRISPR arrays of NZ_CP048429_19

>merge|NZ_CP048429|19|3375975-3376236|PILER-CR
AAAGTGGGTTACAGCACGGAATGAGAGGTAAAAGTACCTTTGAATTCTCCAAAAGTGGGTAACAGCACGGAATGAGGGGTAAAAGTACCTTTGATTTCTCCAAAAGTGGGTTACAGTGCGGAATGAGAGGTAAAAGTACCTTCGATTTCTCCAAAAGTGGGTTGCAGCACGGAATGAGAGGTAAAAGTACCCTTGAATTCTCCAAAGTGGGTTACAGCACGGAATGAGAGGTAAAAGTACCTTTGATTTCTCCAAAAGTGGG

>NZ_CP048429|19|1|3375975-3376236|PILER-CR
AAAGTGGGTTACAGCACGGAATGAGAGGTAAAAGTACCTTTGAATTCTCCAAAAGTGGG	TAACAGCACGGAATGAGGGGTAAAAGTACCTTTGATTTCTCCA
AAAGTGGGTTACAGTGCGGAATGAGAGGTAAAAGTACCTTCGATTTCTCCAAAAGTGGG	TTGCAGCACGGAATGAGAGGTAAAAGTACCCTTGAATTCTCC
AAAGTGGGTTACAGCACGGAATGAGAGGTAAAAGTACCTTTGATTTCTCCAAAAGTGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062519603.1|3373038_3374025_+|SIS-domain-containing-protein	unknown	unknown	gnl|CDD|225132
NZ_CP048429.1|WP_062519608.1|3369439_3370324_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP048429.1|WP_062519675.1|3368020_3369331_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270452
NZ_CP048429.1|WP_062519588.1|3382255_3383404_+|glycerate-kinase	unknown	unknown	gnl|CDD|376844
NZ_CP048429.1|WP_062519596.1|3376589_3377816_+|MFS-transporter	unknown	unknown	gnl|CDD|340883
NZ_CP048429.1|WP_074648687.1|3383462_3384488_-|sugar-diacid-utilization-regulator	unknown	unknown	gnl|CDD|226355
NZ_CP048429.1|WP_062519606.1|3370326_3371154_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP048429.1|WP_062519605.1|3371179_3371998_+|carbohydrate-kinase	unknown	unknown	gnl|CDD|238915
NZ_CP048429.1|WP_025708964.1|3366970_3367252_+|CopG-family-ribbon-helix-helix-protein	unknown	unknown	gnl|CDD|223932
NZ_CP048429.1|WP_062519586.1|3384713_3385505_+|hypothetical-protein	unknown	unknown	gnl|CDD|237874
NZ_CP048429.1|WP_062519602.1|3374145_3374706_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_074648689.1|3380867_3382220_+|GntP-family-permease	unknown	unknown	gnl|CDD|225330
NZ_CP048429.1|WP_019913013.1|3367255_3367606_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl|CDD|367091
NZ_CP048429.1|WP_157243747.1|3380652_3380802_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062519604.1|3372070_3372790_-|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225099
NZ_CP048429.1|WP_143013575.1|3377912_3380135_+|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|225094
NZ_CP048429.1|WP_062519582.1|3386995_3387787_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|235546
NZ_CP048429.1|WP_062519584.1|3385919_3386912_-|S-layer-homology-domain-containing-protein	unknown	unknown	gnl|CDD|306825
NZ_CP048429.1|WP_074648684.1|3388142_3390122_+|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	unknown	unknown	gnl|CDD|223556
NZ_CP048429.1|WP_062519599.1|3374985_3375594_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062519603.1|3373038_3374025_+|SIS-domain-containing-protein	gnl|CDD|225132	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane].	5.1527e-84
NZ_CP048429.1|WP_062519608.1|3369439_3370324_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.18642e-78
NZ_CP048429.1|WP_062519675.1|3368020_3369331_+|extracellular-solute-binding-protein	gnl|CDD|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.22987e-62
NZ_CP048429.1|WP_074648684.1|3388142_3390122_+|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	gnl|CDD|223556	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis].	4.51949e-175
NZ_CP048429.1|WP_062519596.1|3376589_3377816_+|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.94753e-71
NZ_CP048429.1|WP_074648687.1|3383462_3384488_-|sugar-diacid-utilization-regulator	gnl|CDD|226355	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms].	5.18596e-75
NZ_CP048429.1|WP_062519606.1|3370326_3371154_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.70457e-83
NZ_CP048429.1|WP_062519605.1|3371179_3371998_+|carbohydrate-kinase	gnl|CDD|238915	cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.	1.66182e-78
NZ_CP048429.1|WP_025708964.1|3366970_3367252_+|CopG-family-ribbon-helix-helix-protein	gnl|CDD|223932	COG0864, NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain [Transcription].	5.83309e-19
NZ_CP048429.1|WP_062519586.1|3384713_3385505_+|hypothetical-protein	gnl|CDD|237874	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau.	7.21228e-08
NZ_CP048429.1|WP_074648689.1|3380867_3382220_+|GntP-family-permease	gnl|CDD|225330	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism].	4.10693e-55
NZ_CP048429.1|WP_019913013.1|3367255_3367606_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	5.60702e-40
NZ_CP048429.1|WP_062519588.1|3382255_3383404_+|glycerate-kinase	gnl|CDD|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP048429.1|WP_062519604.1|3372070_3372790_-|GntR-family-transcriptional-regulator	gnl|CDD|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	6.09222e-57
NZ_CP048429.1|WP_143013575.1|3377912_3380135_+|S1-RNA-binding-domain-containing-protein	gnl|CDD|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP048429.1|WP_062519582.1|3386995_3387787_-|SDR-family-oxidoreductase	gnl|CDD|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	5.43329e-91
NZ_CP048429.1|WP_062519584.1|3385919_3386912_-|S-layer-homology-domain-containing-protein	gnl|CDD|306825	pfam00395, SLH, S-layer homology domain.	1.00119e-05
NZ_CP048429.1|WP_062519599.1|3374985_3375594_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.45927e-18

Protein sequences

>NZ_CP048429.1|WP_062519599.1|3374985_3375594_+|TetR/AcrR-family-transcriptional-regulator
MVRIKGRSDGEETKKRIVQKAAQLFVQKGYGAVTMNEVCSAAKVSKGSLYHHFPSKDELFLYVVEDDTEQWLSQWAEKSSSISGLEERFYALGEHYANDFQNPLIRALEEYARSRPHSDEVHQRLAQLCESASEACRNLLQEGMDTGYLIKGNLDNYVIIVSGLLEGVARVSEIMAAAKAPEDIMQYYREAIGLLLQGIRAR
>NZ_CP048429.1|WP_062519602.1|3374145_3374706_+|hypothetical-protein
MSIYHSIDDFLHRLESTLISNKEPVDANRILAELRASYHEVGGNGGKLYLKYADEIRAMLEYPEEVVISKAMYCEFKQGFRQLKKLWQAKRNVESFYIHCCCQIRQLLIFNRMSEERCRSCQGALLYYYEENSQMVIKECQACRRIYSSRTGTLISASKGLKLSRASKQNLQEVVSPAEWIGYGGE
>NZ_CP048429.1|WP_062519603.1|3373038_3374025_+|SIS-domain-containing-protein
MNQEHVQQLEAAIQAVAQRKVTNFYFVACGGSLANVTPAQYILDREIEIPSAAYSSNEFIHRSPKALGPNSVVITCSHSGNTPETVAATTFAREKGALTICLTNLVDSPLWEAAEFKLHYNYAPYGEELRGEETSMAILYRLVFGILQTLYPNEKYANAISSIENGLHGVYERNKALTLEAAKAFGRNYKREKLIYTMASGINYSVAYSFAICLLQEMQWIHSSAIHSGEYFHGPFEITDFDVPFIVIKGLGETRPLDDRAYDFCVKYSDKTILIDAETFDLEGISPDVRPYFTNLVAGIVLRQYAQHLSEETGHALSVRRYMWKMEY
>NZ_CP048429.1|WP_062519604.1|3372070_3372790_-|GntR-family-transcriptional-regulator
MRQLQPDSIIPLYVQLKDIIKSDIEAGIIKPGQKIPTEFELCEMYSISRRTVRTAISELIEEGLLDRKQGKGTFITTPKIQAKFGPSVLGFTEICKLNNLRPSSKLVEQRQISATSKLAEALNVPVNSSLVAIRRIMLADEVPVMMDYAVFTEAYNFLLQENMDNRSLYAAIKAKRDVSFMRQRKSIQTVFADSAQAQYLEIPVGYPLLLSQGTVVSSTMEIIHYGEQHIVGDKFVLYI
>NZ_CP048429.1|WP_062519605.1|3371179_3371998_+|carbohydrate-kinase
MRIIAVGDNVADCYLDQGLYYPGGNAVNVAVNCKRNGCEEVSYIGVFGNDKKSDHIMDSLDKEGISYRYSRRVYADSGSPGVKLVGNDRVFVRGAQDTAQHLLRLRLMPADLEYIAGHDVCHTSCYSSIERELPVIKEHCDISFDFSTRTDEDYLGQVCPHIKYAFFSGAELDSAQIEALIKTCHRLGTEIVGVTKGSEGALFSRNGVLYKQGVTPAEVVDTMGAGDSFIAGFLVSYLKKGVMEEALQSGANSAAYTCTFYGGFGYPKPIGE
>NZ_CP048429.1|WP_062519606.1|3370326_3371154_+|carbohydrate-ABC-transporter-permease
MAGKLSIYRLIVLLPLLVGVVLVVYPLFWMVSSSFKSYDEIFGSVWNLPSEWLFSNYVTAWTKGIGNYFMNSVIVTVSTIAGVVIIASLCAYGLSRFRFRYSKTLFLFVLGGMMLDPQVCLVPLYKLLQNLNIHNTYFALILPYIAFRLSIAVLLIRSYFLGIPKEIEESATMDGCSVFRTYLSIFLPMSLPIIMTTIILTSYYAWNEFLFSIIFIDSDKYRTIPAGLMNFKDALSTDWGVLLAGLVISSMPLIILFIFMQKYFIQGMSDGSVKG
>NZ_CP048429.1|WP_062519608.1|3369439_3370324_+|sugar-ABC-transporter-permease
MRTRRTIAPYLFVLPCVLMLAVFVYMPLIQNFFYSFQNISLLSGKSSFAGFDNYKTLFSDPVVGKALINNVKYAVISLIFQVGFGLVLAAILEEEFLRKVSAVFRTIFFIPVIISITVICLLFSFVYNPTDGLLNMFLQAVGLDSWAKPWLGSGTTAIYAVIAVSQWQSIGYCMMLFIVAIQKIPRDLYEAAKIDGAGKIKIFFSITLPQVKEMIFVNSLLTITGAFMVFNEPFILTKGGGPGTSSITIAVLMYQNGFVRDSMGYAATISLLIFAITAVLALIQTLSFRTGKGD
>NZ_CP048429.1|WP_062519675.1|3368020_3369331_+|extracellular-solute-binding-protein
MGRKLGLLMLAGLLVVLTACSSNNSSTAANGNGNGESEGKTTTLKFFHRWPNEPRNSYFNYIKEEFEKQNPGVKIEMESVLNDNYKEKIKVLVSSGDIPDVFSSWSDSFAESLVSSGRVEDLSSMYDSDPDWAKTLVQNQLKSFTFDDKIYGVPFTMDGKVFFYNKKIFSKLGLEKPKTWDEFIALLDKLKAAGYDTPIIEGLQDSWAVGHYLGTMNQRMLSPEVLATDYAVGTGQFTDPGYLQVLKYWQKLSSYMGPNATSVNHEATRNMFIAGEVPIHYLQFAELGYLKDKPDLEFDYFNFPQFSEGKGNAEGLTGAPEGFMISKETANKELAEKFVKFIVSPENAAKFQQDVGSMTTVIGAATKENSPPGTLEAIDVIQNAAETTPWLDNAVDASVADAFMRGGQAIAADIETPENVLKEVQAAAAKLKAVKK
>NZ_CP048429.1|WP_019913013.1|3367255_3367606_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MIVKRGDVFFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTVIVAAITAQIQKAKLPTHVEIDAAAHGFDRDSVILLEQVRTIDKQRLTDKITHLDDETMKLVDDSLQISLGLIDF
>NZ_CP048429.1|WP_025708964.1|3366970_3367252_+|CopG-family-ribbon-helix-helix-protein
MANLQNTKRIMISLPDHLLQEVDGIVQLENSNRSELIRQAMKLYLSERRKRTIRDSMQRGYMEMAKINLTMACEAFLAEEDADSTLGRLVSGV
>NZ_CP048429.1|WP_062519596.1|3376589_3377816_+|MFS-transporter
MTLLLRNRGAMLLLMLNIFLAFTGIGLVVPIMPTYMNELGIGGSIVGLLVAAFSLTQLILSPFAGGVSDRVGRKKIIVGGLVVFALSELLFGLAESSWLLFASRMLGGAGAAMIMPAVMAYVADTTSMEERAKGMGLINAAITTGFIIGPGLGGYLAELGIRVPFFAAAGAAAFVAVVTFAVLPESRSSAELGAAKSIQENKDSKDSLITQLVRSYREPYFFGLLIVFVLSFGLANYETVFGLFVDHKFGFTPKDIAFVITFGSISGAVIQVTAFSWILNRCGENKVISASLLVSGLSIFLTLFVHGYWAIVTVTFIVFLAMDILRPAVGTQLSKMATESQQGFVMGMNSAYTSLGNIAGPIVAGVLFDLDINFPYAVAALVLMLCFLLSLGSRKRMGRPDQQAIHGD
>NZ_CP048429.1|WP_143013575.1|3377912_3380135_+|S1-RNA-binding-domain-containing-protein
MDTNQAGPAAEEALARQEQETITQAIAKELGISVKQVRTTVGLLDEGNTIPFIARYRKEMTGELDENVLRDIEERLSYLRNLGDRKKDVLRSIEEQGKLTKELQEQILKAVKLQEVEDLYRPFRQKRKTRASVAKEKGLEPLADWVMEQRRQGQPLEEAAKYIDAEKGVESAELALQGAMDIIAENIADDPAIRSWVRQYTASQGILVSEAKDTEQESVYENYYNYREPVHKMPPHRILAINRGERENVLKVGIEVTADKIHAFILRKLVKGPSPVKELLEAVTEDAYKRLIAPSVEREVRGEMTEKGETQAISIFSGNLRSLLLQPPVKGRNVLGVDPAYRTGCKLAVVDDTGKLLEVAVTYPTPPNNKKREAAAKFKELIAKYGIQLIVIGNGTGSRETEQFTAEVIAEIGDPGLAYLIVNEAGASVYSASKLAQEEFPDLDVAERSAASIARRVQDPLAELVKIDPKAIGVGQYQHDVSQKHLEESLKGVVESAVNHVGVDVNTASASLLSYVAGVNATIAKNIVKFREENGKFTTRKQLQKVPRLGAKSYEQCIGFLRIPGGDNTLDRTPIHPESYPVVDRLFRELGLDVASLGSKEVAEQLQAQDAAELAVKLDVGVPTLRDILESLQRPGRDPREELPQPIFRTDVLKIEDLVPGMEMQGTVRNVIDFGAFVDIGIKNDGLVHISQLSGSYVKHPMDVVSVGDNVTVWVMGVDLKKGRVSLTMRPPRGNDGGAK
>NZ_CP048429.1|WP_157243747.1|3380652_3380802_+|hypothetical-protein
MNETVIRNFRQEDMAALGGFYQAVTASGPALAYDALTTEDNLPLISASG
>NZ_CP048429.1|WP_074648689.1|3380867_3382220_+|GntP-family-permease
MRTAFILKACSTRVIGGCTMEGLTIGWYGALAGLALAIILILRKLNPVYSLFLGAIAGALIGGANLEQTVSVLVSGTQSVMGTVLRVLAAGVLAGVMMESGAAETIAQAIVKKFGGSKAILALALATMIITAVGVFIPVAVLIVAPIALSVGNKMGISKTALLLALSGGGKAGNIISPNPNTIAAARGFDLDLSHVMLAGFIPAVCGLIVTVIVASLLKNKGVRVLDGEAVYNEIDTSKYPPLGKAIVAPLVAVILLMVNPIGSITGIDALSRIKVDALYILPVAGIIGLLAMGQGNKILAYTSSGLNKMTATVLILIGAGGIAGLIAASDLSVQIVSLIQASGISGTFLAPISGILMAAATGSTSTGVILATGSFGQAILNMGTAPLAAAVMVHTGATVIDSLPQGNYFHVTADSMKMSIKQRMGLIPYEAIVGGTMAVAATVIYGFLL
>NZ_CP048429.1|WP_062519588.1|3382255_3383404_+|glycerate-kinase
MSEKEKTFILAPDSFKESMTAKEVCIAMEKGLRKVYPAARYIHVPMADGGEGTVQSLVDASGGEIHYKEVTGPLGQKVTAKYGILGGGQTAAIEMASASGIHLVSKETRNPLVTTTYGTGELIRECLDRGIRKIIIGIGGSATNDGGVGMAEALGARFLDESGAELPRGGGSLDRLASIDISALDERLHHVQMIVACDVTNPLCGEQGASRVFGPQKGATPEMVQKLDVNLAHYAEVVKQQLHKDVRDLPGAGAAGGLGAGLLIFTRAVLQKGIEIVIEYTGLKEKLAGADVVFTGEGGIDYQTKFGKTPYGVARAAKASGQKVIAVAGYIGEGIDALYEEGFTAIFGIVPGASGLEKLLAEGPQNVERTCENIARVLKLSE
>NZ_CP048429.1|WP_074648687.1|3383462_3384488_-|sugar-diacid-utilization-regulator
MFQLSENQAQEIVDKMMMDIPYNINIMNADGIIIGSGRRERVGTVHQGAVQALSTGRMVEVWEDSRFEKKGTNEPIVIGHTRVGVIGISGNPDEVRPFCNIVRTTVSLLIEQRNSLETLAHEANRKKAFLELLLNHQGAYSQKLRKEAAPYQIDLLLKTVVLYIKHFSTDADPDKLLLRYPSFAMDEDTQLLILQESGDPRPLIRELLQVQPQVLIAAGKQEASIAESYRQARSAMNILLALKPASQVIAFENVEFLVKLSHAPLAPFNTAAKLEDAVDMIETLRSFINHNCSVSHTADDLNIHRNTLQYRLKRIQSLTGKDPRNLLQLFELTHGLLALYK
>NZ_CP048429.1|WP_062519586.1|3384713_3385505_+|hypothetical-protein
MITVKKILGHSALAALMLVLAACNSASEAEPEATLAPGQTQGSPSPSASASAAPSASVSAAPSASASAPASAAPASSEPAESQVPQATDAPEEGMPPTAKEAASTVLRALSRGDMETLASWAHPDKGVRFSPYAYVDTATDLVFTRDQLKGLMKDSKPYVWREFAGSGEVIKLTFAEYFKRFVYDADFMNKAKTALNKGLGQGTTLNNINEVYPKDSYDFVEYHIAGVDPSAEGMDWRSLRLVFEKMGEDRALVGIVHDQWTP
>NZ_CP048429.1|WP_062519584.1|3385919_3386912_-|S-layer-homology-domain-containing-protein
MNKYSFQMSAKKMTIACGILAASVSFGASAFAFSDIKGDPAESKINALHNKGVVNGVTTDRFAPKSKVTFAQGIQFIVNGLQLSPKASGGGSTVTSSVYFDKVKDKAWYASAFLIAKQNGLTLDKSVDPNAAMTRIQFAHLMTQALQSKGNFPVTLMYADISDGSKLSNAEMNSLQILVNTHLVTLEKNNTFRPNDAVTRAEAAVWIYDAAEFAQTVITPEVTPPDEGTAAPAQLYEGAITLEKAGQGVNKATLTVNDLPNPGYGLTINRIEFGKDKTAVIYFSVTKPAPGKMYPMVITKGTAVTYLPEGYTATAKSLTTAPSSSGSSVR
>NZ_CP048429.1|WP_062519582.1|3386995_3387787_-|SDR-family-oxidoreductase
MADKRLKDKIAVVTGGASGIGKATAIRFAQHGAAVYILDLTPENLAETKQEIESIGGTATVIECDVSNPGLVEESINRIGGENGRINVIFANAGINGTMAPIETLEMDDWDQTIHTNLRSTFATVKYAIPYMKEDGGSMIITSSINGNRVFSNIGAAAYSTSKAGQTAFMKMAALELAQYAIRVNAVCPGSIDTNIGENTYKSEDLKEVQIPVEFPDGNHPLEQAPGKPEQVANLVLFLASDESFHVTGTEIFVDGAESLLRG
>NZ_CP048429.1|WP_074648684.1|3388142_3390122_+|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein
MVQQQGMERINVGIFAHVDAGKTTTTEHILYESGRIKAVGSVDSGTALTDSMEVERQRGISVRAALASFEWRGVLVNLVDTPGHVDFLSEVERSLRVMDCAVLILSAVEGVQAQSEMIWNALRKLGIPTLIFLNKMDRTGADPAAVLAQARTYLSGDILPVQQALGQERNYAGAVDLWAEAADPAARTELLESLAERDEALLETYMSGAPLDLTAWKNQLKAGAAAGKWFPLVYGVAAKGLGITQLLDAMTDYFPRACGSLELPVSGIVYNIQRDKSMGRMAFVRLYQGTIRNRDTVMNYTQDVQGKVTQIRKVEGGRTEDVGALEAGDIAVVYGLSGVRIGDVLGVPDAIPQEAKLAVPLLTVRVHWDAAVDEHEVIGAFQELADEDPLLDTQWLQDERELHIKVMGPIQLEILDSVLESRYGLKVTFGQPSVIYRETPSRTGEGYVAYLMPKPCWAILRFRIEPGPPGSGLVYESLVRSSDLLPQYQNETARRVPEALMQGLYGWEVTDLKVTLTEGQHHVWHTHPLDFAVATPMAIMDGLNRVGTKLLEPILQVRIVVPEENGGRVMNDLVQMRGTFEPPVLQGERMIIEGRLPLATSLDYPVSLSSYTKGRSTFTSFFAGYEECPPDVRAERTRRGVNPLDQARYILSVRKALQG

Crispr_ID: NZ_CP048429_20

• CRISPR_ID: NZ_CP048429_20
• CRISPR_location: 3517213-3517288
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_20

Consensus_repeat	Method
AATTAGTGATCCTTTTTCCAACTT	CRISPRCasFinder

spacers of NZ_CP048429_20

>20.1|3517237|28|NZ_CP048429|CRISPRCasFinder
AGTCTGCGGAGATCCGTGTGCTGGGGCC

CRISPR arrays and Neighbor proteins around NZ_CP048429_20

CRISPR arrays

The CRISPR arrays of NZ_CP048429_20

>merge|NZ_CP048429|20|3517213-3517288|CRISPRCasFinder
AATTAGTGATCCTTTTTCCAACTTAGTCTGCGGAGATCCGTGTGCTGGGGCCAATTAGTGATCCTTTTTCCACTTG

>NZ_CP048429|20|18|3517213-3517288|CRISPRCasFinder
AATTAGTGATCCTTTTTCCAACTT	AGTCTGCGGAGATCCGTGTGCTGGGGCC
AATTAGTGATCCTTTTTCCACTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062523900.1|3518976_3520086_-|FAD:protein-FMN-transferase	unknown	unknown	gnl|CDD|224394
NZ_CP048429.1|WP_062523905.1|3526852_3527575_+|DsbA-family-oxidoreductase	unknown	unknown	gnl|CDD|239322
NZ_CP048429.1|WP_074648106.1|3514144_3515596_+|RtcB-family-protein	unknown	unknown	gnl|CDD|376465
NZ_CP048429.1|WP_062523901.1|3520333_3520906_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP048429.1|WP_062523898.1|3517545_3518052_+|metallophosphoesterase	unknown	unknown	gnl|CDD|223695
NZ_CP048429.1|WP_062523895.1|3513528_3513789_+|YqkE-family-protein	unknown	unknown	gnl|CDD|315655
NZ_CP048429.1|WP_062523891.1|3502828_3503923_-|aminopeptidase-P-family-protein	unknown	unknown	gnl|CDD|223085
NZ_CP048429.1|WP_062523899.1|3518119_3518833_+|HAD-family-hydrolase	unknown	unknown	gnl|CDD|223943
NZ_CP048429.1|WP_062523894.1|3513105_3513450_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|224647
NZ_CP048429.1|WP_062523893.1|3511585_3512431_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|212492
NZ_CP048429.1|WP_062523907.1|3529482_3530052_-|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|379534
NZ_CP048429.1|WP_062523963.1|3504558_3505755_+|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl|CDD|369642
NZ_CP048429.1|WP_062523903.1|3524043_3524976_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|132997
NZ_CP048429.1|WP_062523904.1|3525356_3526643_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NZ_CP048429.1|WP_062523897.1|3515598_3516885_+|ATP-binding-protein	unknown	unknown	gnl|CDD|223540
NZ_CP048429.1|WP_062523890.1|3501632_3502358_+|queuosine-precursor-transporter	unknown	unknown	gnl|CDD|224652
NZ_CP048429.1|WP_074648108.1|3521008_3523102_+|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl|CDD|224428
NZ_CP048429.1|WP_062523906.1|3527717_3529298_-|oleate-hydratase	unknown	unknown	gnl|CDD|237575
NZ_CP048429.1|WP_039838207.1|3512558_3513062_+|N-acetyltransferase	unknown	unknown	gnl|CDD|224168
NZ_CP048429.1|WP_062523892.1|3506103_3511383_+|S-layer-homology-domain-containing-protein	unknown	unknown	gnl|CDD|375063

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062523900.1|3518976_3520086_-|FAD:protein-FMN-transferase	gnl|CDD|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	2.96198e-106
NZ_CP048429.1|WP_062523905.1|3526852_3527575_+|DsbA-family-oxidoreductase	gnl|CDD|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	1.53265e-93
NZ_CP048429.1|WP_074648106.1|3514144_3515596_+|RtcB-family-protein	gnl|CDD|376465	pfam01139, RtcB, tRNA-splicing ligase RtcB. This family of RNA ligases (EC:6.5.1.3) join 2',3'-cyclic phosphate and 5'-OH ends. They catalyze the splicing of tRNA and may also participate in tRNA repair and recovery from stress-induced RNA damage.	1.04924e-128
NZ_CP048429.1|WP_062523901.1|3520333_3520906_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.16303e-14
NZ_CP048429.1|WP_062523898.1|3517545_3518052_+|metallophosphoesterase	gnl|CDD|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	7.85915e-43
NZ_CP048429.1|WP_062523895.1|3513528_3513789_+|YqkE-family-protein	gnl|CDD|315655	pfam13025, DUF3886, Protein of unknown function (DUF3886). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There are two completely conserved L residues that may be functionally important.	1.45158e-08
NZ_CP048429.1|WP_062523891.1|3502828_3503923_-|aminopeptidase-P-family-protein	gnl|CDD|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	1.70473e-107
NZ_CP048429.1|WP_062523899.1|3518119_3518833_+|HAD-family-hydrolase	gnl|CDD|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	7.77007e-36
NZ_CP048429.1|WP_062523894.1|3513105_3513450_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	4.20505e-33
NZ_CP048429.1|WP_062523893.1|3511585_3512431_+|SDR-family-oxidoreductase	gnl|CDD|212492	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs. Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	7.99708e-111
NZ_CP048429.1|WP_062523907.1|3529482_3530052_-|TetR-family-transcriptional-regulator	gnl|CDD|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	3.68573e-37
NZ_CP048429.1|WP_062523963.1|3504558_3505755_+|PQQ-dependent-sugar-dehydrogenase	gnl|CDD|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	4.09022e-114
NZ_CP048429.1|WP_062523903.1|3524043_3524976_-|glycosyltransferase-family-2-protein	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	5.66656e-15
NZ_CP048429.1|WP_062523904.1|3525356_3526643_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	6.91531e-57
NZ_CP048429.1|WP_062523897.1|3515598_3516885_+|ATP-binding-protein	gnl|CDD|223540	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].	3.88547e-24
NZ_CP048429.1|WP_062523890.1|3501632_3502358_+|queuosine-precursor-transporter	gnl|CDD|224652	COG1738, yhhQ, Uncharacterized member of the PurR regulon [General function prediction only].	4.309e-55
NZ_CP048429.1|WP_074648108.1|3521008_3523102_+|YhgE/Pip-domain-containing-protein	gnl|CDD|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	6.62211e-120
NZ_CP048429.1|WP_062523906.1|3527717_3529298_-|oleate-hydratase	gnl|CDD|237575	PRK13977, PRK13977, myosin-cross-reactive antigen; Provisional.	0
NZ_CP048429.1|WP_039838207.1|3512558_3513062_+|N-acetyltransferase	gnl|CDD|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	1.23103e-51
NZ_CP048429.1|WP_062523892.1|3506103_3511383_+|S-layer-homology-domain-containing-protein	gnl|CDD|375063	pfam17228, SGP, Sulphur globule protein. Sulphur globules are membrane-bounded intracellular globules, used by purple sulphur bacteria to transiently store sulphur during the oxidisation of reduced sulphur compounds. This proteobacterial family contains structural proteins of these sulphur globules, and includes sulphur globule protein CV1 (SgpA) and sulphur globule protein CV2 (SgpB).	2.58637e-07

Protein sequences

>NZ_CP048429.1|WP_062523897.1|3515598_3516885_+|ATP-binding-protein
MEKENKTHTVIYKYDENTTGMIKGYDAYARLVDGILEALHSRYGVRYELYASDDPNSEYWKLLENDVQSGHPGVEHVARIFDRLEDRTFVYDDDKEQPEYSIHLSIRNNVLAYPDMGVALARVPVFQENGINFQDYVFAASDGQLQGFLGNVRKRQREQNINKVTVFTDRRNGIFREDEPITRSVGREAVVLEAGIKKEIYRSLDQFFDSDRSFYVTYDIPYKRGILLYGHPGNGKTTLVKSIAGSVPGPVVYWQITEYTSSESVNEVFEAAARLAPMVLVIEDIDSMPQEVRSFFLNTLDGATSKEGIFLIGTTNYPEKIDPGLMNRAGRFDRAYEIKMPDEELRLEYLKLRGFTAFAGEEGVALAARLTADFSLTQLGELYVSAALEWHENGRADVEALVRGMRGELDKGRKREWMKDASSTIGFY
>NZ_CP048429.1|WP_074648106.1|3514144_3515596_+|RtcB-family-protein
MNFNEQQAGGYVPRYKHELALPGGDLKVYASEQLFAALDYKVLEMANNNLQIPNIEYMSYTPDVHVGVGTCIGTTAVWDATDGYVSPSIVGSDIGCGMRVHLTTLHKDDLREVKLRRKLVRAIEKYLPMEQQQRGTYSDIRLENIVRKGLHGLPNKYVPDSYTPKKSSALSHVEISKLNFDEEILNELPEMAWHRGHRQLGTLGGGNHFVEIQAIEIEEEQRELAEAWGLRDGQIAVMIHSGSRAWGGMVNQFCTPAFAKVMGQLGLGSADPRLIYAPLAHPQAQRYVNLMYSALNYAVVNRHLIAYAVREGFRDVFGPKCELRTLYDLMHNYAWQEQTVAGTKFVHRKGATRALPAGHPDNPRPYAATGHPALIPGSMGTASYIMVGQPGGEENYYSICHGAGRIRSRSATKRLVSVNDFSKSLRVGQEDEIVVNQHSLESIIDESPQAYKNVDEIIASVTGAGLAAVVAKCKPLAAIKGTK
>NZ_CP048429.1|WP_062523895.1|3513528_3513789_+|YqkE-family-protein
MAKKKKTIPTPRPVASDAPATLKDLLSSDVLDKLKAQSDALKAEENEKKEAARKAVEDQRKAEQKRLENDFAHLLENSSQDWHKFK
>NZ_CP048429.1|WP_062523894.1|3513105_3513450_-|helix-turn-helix-transcriptional-regulator
MKSTDLCPRLQKSMDIIGRRWTGLIIYQLLQGPQRFSVIEAALPVSGRLLSERLKELEQEGIVLREVFPETPVRIQYSLTDKGRALESVIRDLQQWSDSWITAEECQPEPIQPQ
>NZ_CP048429.1|WP_039838207.1|3512558_3513062_+|N-acetyltransferase
MTAQNYSIEDAAAGDLAAIVDIYNSTVAGRMVTADLEPVSVADREKWFQEHNSHHRPLWVLKKDGEIAAWFSFQSFYGRPAYNGTAEISVYVNEKFRGTGAGSLLLAKALEECPRLGLQNLVGFVFGHNEPSLSLLRKFGFEEWGLLPGVAEMDGVLRDLVIIGRKL
>NZ_CP048429.1|WP_062523893.1|3511585_3512431_+|SDR-family-oxidoreductase
MVGKTVLVTGGNSGMGLATTIEMARRGAEVIMACRSRKRGEEALAEAKRQSGSDNIRLMLCDLASFDSVRAFAEEFTGGYPVLDVLINNAGVVALKRQLTADGYELDFGVNHLGHFLLANLLLERLIAAEQGRIVVVASGAYKIVKLHLEDHTLSRGYNPAKAYARSKLANILFTRELAAQLRGTQVTVNAVHPGAVGTSIGVNRDTGFGRSLLKLLSHFFLTPEQGVDTAIWLATAPELRGVTGQYYYRRKIQELSPRARDAAAAAQLWQWSVEHTGLQL
>NZ_CP048429.1|WP_062523892.1|3506103_3511383_+|S-layer-homology-domain-containing-protein
MYSKRLRSAVSMVLVFILSFMGVLEVSAASLKATVVTSEKMLNGTQKISVNSVLDVTYGDYNKLNEVKFSLMKDGNVLATQIKQKDQGERISAADSVYSLKYPDISFEGLTAGEEVVLQAEYQGESGLIVTDPQSIKVPAASEIQIVVERMAKDSDTYNISPTGEVRSDDKNIRLTILSKGVPLANEAISVGTYSSYNNLTTDEAGQVQIIGNPKVSLTSPVLFVSVRQGKPDYEATPLYVNNLMKEGTYTAAIRYLDGNGKLIQQKSDNTSLPSGVSQSFGTSGLDVLVLKTGEISGTYPALIRSVENEVYMFQTSQTALYSAADGARLEIVQDSSEYSRLGFEYSWEGAPVEIESFSIVPNNQYKQVNLSNPFQNIASSSLYVKKDVEYDITAVAGIPGTNSKVVLRNQVKPAEDQFTVQYAAKAADFSALKVQVPERGQGLGDLFISYLNNKFNHNELSLKVQAADSTLYVRKGEEIHRLTTTVSGAAKNSSYNDEIVLNSFFTPTDNEYAFKGGSKYTSQVTLKVLSSDYYDQDEVRNQIVLGENLQLRVDMRDEYNNAIDLTSEYTIQILDASGAIVEDNGLSWTSEEEDGKLMRISQRQWKPAKSGDYTIQFLPHHYVSGTGYVKGAVIAEAALKVLPKQELEVEIRDKSGNLVDLVNKPYITLDQAEKVTVTVREHVTGGLGKVLPGVKVTRYGEDIGVTDEQGQLILPARLGTYFGEFFFKKTDYLSRTESVAVIDPKIQAVVRVRGLDKAEGAYDGGVPLDYAYVQAVIKKSDDSYTRQSKFIGTGGEQTFLVVESPSTVGVDFMRYNRSHLGVESKYGYYMYGSIHTEPGKDYSLLLDAREPLQAVSKVNLTKYIEELSVIRKDLPGVDYVPYVMDSNTSEDNYFYATEGTYSALAHTKGDIFIYRDDVAVNAGDNIWDYNDSAAGLATLLAPDSGSIYGVEYITPARSQLRGYSYDARQIQLTPGEVIVKVDQLVGSLEYQFNIHFAAGALKAGTISELAPGAIAGLDIFGLQNGKLVRTSGNEQLQIGLVDTAGNQIGQLSKPRILVTDYGSSRGYKLLYPEAASYEIQDEAGLKLYEATSTGYPISVNRIFPNGTYVLKASVTIEGQTYSLDKKFVLDTAAGTVIDPGVPVPGGNGGSGGTDPGNGSNPDNGSGNGNGNGNGNGNGNGNGNGSGNGNGGVTAPVTTTPVNVNVNEQNTKLQDLVKNSSGTQAERAAAAQKALGSIAESLKAGATAQEAEQNSKSMSQALDSAAQLLASIQDPAEKQKIVSSINTLIDSASYVLNKLDTADKALAFAQTLIQNAAAVMNNTQGVAAAEIEQLKQGILSSSQAALNKAGEVTISKEHVTLEGNTVSSQLTEELVSKQIESSKKALSAVSEQLTAKLGAGLASELKVSLTVEVPAMGAGVNKLNTSLPSEILKVLQDNDVDGLKLQMGTTAFTIEPDTFGKVEAGQKITLAAEVVENAVIGKPSQAEPLATLPVMEFSARVGDKAVKNFEKPINVTFDVSAMDTSKYPAENLEHLTVYVLNETSLTWEAVGGKYDPVTQTVSALRGHFSRYTVMIGTAAFKDVADNHWAKKEINYLLTKGILEQTAEFNPSGKVTRAQFANWISRAYGLDGSGLTLPFKDVAAGSAGYNGVAAAYEAGIITGKSASAFDPGATISRQEIATMLARALTLYNGAKTVADPGAVNAAYTDGGKIAKWAAAGVALAKRTDLFKGFEDGTFRPAQTATKAEAAALIYRLYQLK
>NZ_CP048429.1|WP_062523963.1|3504558_3505755_+|PQQ-dependent-sugar-dehydrogenase
MNSAAPEVNEAGMSAGENRPAKTPSASASPEPVPSAAEPSKDGGGKPENSQPAFSSSSFPYTARTLASGLNVPWEMAFAPDGRIFFTERPGTLRVFEEGELRKKPLLELPAPFISEGEGGLLGLALDPAFEDNGFAYAYHSYRSDSGGVENRVLRLSISGSKAEIDKVLLDGIPGDTNHNGGRIKFGPDGYLYITTGERYEPELAQDQESLGGKILRISKDGTLPADNPFPHSPVYSWGHRNPQGLAWQPESGVLYSSEHGQSSHDEINLIEAGGNYGWPLIEGDEAGTGSVAKMKLPLLHSGEVTWAPSGMAFITQGPWSGELLVANLAGQQLLHVSPGTGDKKPSAEALFHEKWGRIRNVAEGPDGTLYVMTNNRDGRGSPGAADDQLIALRPNWK
>NZ_CP048429.1|WP_062523891.1|3502828_3503923_-|aminopeptidase-P-family-protein
MNEALSTLEQGMAGGGLDALLVTDPKHVYYLTGFASNPHERFLGLLLIRGGEPVLIVPALDAEAAHAASSVTKILTHSDTDNPYELLKSCFAGSKPGTVGIEKEHFTVHRYEQLAEAVPAEAFRDIGHLLRSMRAKKTPDEISRMKHAAELVEEVLRQGLTHVKAGVSEIELVAELDYLMKKVGASGPSFDTMVLSGPNTALPHGVPGSRIIQPGDFLMFDLGVYAAGYASDITRTFAVEEADPKLAEIYNTVLAANEAGIAASRAGATFGSVDRAARDVIEAAGYGEYFMHRVGHGLGMDTHEYPSLHGMNGDFIDIGNVFTVEPGIYVAGLGGVRIEDDVWITPEGPQTLTTMSKALTVLHL
>NZ_CP048429.1|WP_062523890.1|3501632_3502358_+|queuosine-precursor-transporter
MFNLLWGILFVVVNFGFYLLCYRLFGKKGLYAWVGVATVIANIQVAKTIAMPFDIVMTLGNTMYVTLYMTSDLLNEKYGRAEARHAVWFGFFTLLMTTAIMQMVLLFEPQETDIAQSSLETIFGLMPRLALGSLTAYFISQFLDVRLYAWIRKYYGSSRQLWVRSNGSTMVSSFVDTLVFCTIAFAGTYDLRVWTEILLTTYVVKFLLTGAGTPILYIARSFKFTEDELPVRTSPDTRSVS
>NZ_CP048429.1|WP_062523898.1|3517545_3518052_+|metallophosphoesterase
MKVGVVSDTHLSSRAKGLPSVLMEAFSKVDMILHLGDWVSLEIYDLLAELAPVEGIAGNNDGAEIIRRLGERKIVTLEGVRIGMIHGHAPHSRKGTDGNALLAFEGEEVDCILFGHSHQPLLRQEGDILLFNPGSPTDKRREKQYSFGLLDIKEGKISARHIFYDSRE
>NZ_CP048429.1|WP_062523899.1|3518119_3518833_+|HAD-family-hydrolase
MDNSNDKLAIFFDLDDTLYDHLIPFREAVREVLRPDEGHLNYADLFYKVRHHSDLLWPKYLSGELELEETRVRRLELAFAEYGLELSREQAARVQAAYIGRQYSIEMIEGAAEQLQRFISLGHKVGIITNGPQDHQMSKLRGLGVDRLIPEEMIFISDAVGLAKPDPAIFAHVNRVTGTTAGQSLYVGDTWDNDVVGALEAGWKVCWYNPRGRQPGTEHKPSYIFTSYREFSGLPLI
>NZ_CP048429.1|WP_062523900.1|3518976_3520086_-|FAD:protein-FMN-transferase
MLKNKKSTLLLVVVVIIIALSVTACGSNKDKNSSPEETAGGAKISTDGGTKSLEQTFYIYDTVVNIKVFGDKAEQKNMDDIQQMLERMDKEFSRTKEDGELYAVNKAAGKEAVAVSDETLDIVKQSLKYAEEMDGLFDPTIGPLVDLWNIGNGGESVPPQAEIDKAKALTNYKDVIVDEAAKTVKLAKEGMVLDMGGIGKGYAADRIADYLKEQGLDSAMINLGGSSIIALGNKPNGSPWNIGLQDPDQSRGTQLGTIKISDEVIDASGVYERFFMQDGVRYHHILDPRTGFPSQNGLKSITIMSPNATDADALSTGVFLMGLEDGMKYLESLPEKVDAFFITDDNKIYATSDLKKRLQLTDPTYTFAN
>NZ_CP048429.1|WP_062523901.1|3520333_3520906_+|TetR/AcrR-family-transcriptional-regulator
MSIDRKALILQAATKSFVQFGYKATTMDQVSKIANVGKGTIYTFFKTKEELFEEILDKASQELTSVMNRLAAEDNTFIQKLFNLLDSILEFRSDHELFVKLAQEVRDIGTVQALEGVKRMEEYALDFLRRQIEQAMERGEVKPCDASVAAFMIFRLYLALTTEWNKEHEPLDKNRIKEHMILFISNGILV
>NZ_CP048429.1|WP_074648108.1|3521008_3523102_+|YhgE/Pip-domain-containing-protein
MKAITVFLKDMKILLTKPMLVLTLLGVAALPMLYSSFLVDASWDPYGNTSKLPVAVVNLDKGAVYEGKSMEVGKDFVDELKDNDDFKWNFVNAAEAEDGMAHNRYYMTITIPANFSENATTLTEEHPVQAEIVFEPNSDYNFVAGQIGNSAMSKLKAKLSTQITAAYTRSMFEQVDTISDGLGDAGEGATKLKDGAGKLQGGLSTLKTNLNKLASGTTELQSGLKLLYNGAGSLKQGTGTLTQGTTDLASGLSQLVKAEQQLQAGAVKSQKGAAELNEGLLASMTGSSQLKEGLTASEAASSQLAAGADQVAKGLEQMMVATPGLQENEQFQQLLAASRQVAAGSQQLHTGQEQLLAGSTKLDAGQQQLAAGAKQLSDGGSQLATGLQTFGQKLNQASAGGSKLAAGAAALNTGAVQLGQGLTQLAGGVDGLSEGAVKLKDGAGELKDGAGKLASGSGELAAKLTDAAADTSSVKSGDDTVNMFAEPVKLTEKTDHKLDHYGLGIAPYFLSLALFVGALVFSTVFSLRDSNVPGASPMGRFLSRTLTFVMVSVLQSLLADVVLLYGLKLEVQSAPLFFLFTLIVSFSFTMIVQALVTWLDNPGRFLAIVLMIFQLTSSAGTFPLEMLPGWMQKVNPWLPMTHSIVGYKAIIGSGDYALMREQIVYLLIYAVIFLALTFLYFARQNKRTAAPSKELAV
>NZ_CP048429.1|WP_062523903.1|3524043_3524976_-|glycosyltransferase-family-2-protein
MHDVSIVIPTRNRIKDLTLCIESIGRQTDLEDVSIELLIVDDGDIEEQVLEYFRKVLNRMPQAELRYYRKTKPGVWLSRYEALGLIDGDILLSFDDDAELDDPLYIRRMLDTYAADKSIVGVGGIAKGMSSSRSGKLLGMLTCQMSASPGRLSASTLAGSLLLWGETEDTFETDFFHGCNMSFRASALKDMKPYPWMTSYAVADDIYMCHLASKYGKLVINPDMKITHHESPSSRDKAGRVARATAVNHYYLLNLRKAPVKNYAALLWTLTYLTGKSTLKRNFNAVSGYLSGILFVLNPRKNKYREYMLD
>NZ_CP048429.1|WP_062523904.1|3525356_3526643_+|glycosyltransferase-family-4-protein
MHVGIFMHTNYFEDFFVKGLGLSEEEYVSSYHNDFSFDYARLLHTKGIRTTIYNFTRVGDEVRTYQHGIVDCTIKFIPVGRLYKSYCLIPLSHRTPIGKFISQYISTIQKDLAGILRGDGISLIYAQEYASGRFERLASTAKELNIPIIAAYHGGSIHKWILPIKKHTLHKASFLTTLNQDEQNSMVSHFPHLAERIRLLPNFVNSAIFYKRDKEQALAALGLDPKNRYLITVGRLFEYQKGHSLLVQAVEQLRHIPDLKVLIAGGGPDEQSLRALIKEKNLEDRIILLGTIRNKDILASYYSISELFVLPSRYEGLPLVILEAGACGLPTVAFNVMGVRGLVQHGVNGLLAEGLEPSALAASLDTLLGNPELRAEMGEAALQIVRSDYSEEIIGARLYNLLQESLGVDPSAAHTGGDSFAPELSTPV
>NZ_CP048429.1|WP_062523905.1|3526852_3527575_+|DsbA-family-oxidoreductase
MRIDIWSDNACPFCYIGKRRLEHALSQFEGQDKVEVVFRSFQLDPNAPVQATQDVYDMLAAKYGMTREKAIATNAQLAEQAKGVGLEFNFDTVQNTNTFDSHRLAHYAAAKGKGAEMSERLLGAYFTDGHNLADHEELASLAAEVGLDEAEAAAMLKTDAYADAVKADIAEGQRLNITGVPFFVFNNKYAVSGAQPGPVFSEVLDTVWAEEKNTPELQVIGQPQSKAPDAEGCDDGSCSI
>NZ_CP048429.1|WP_062523906.1|3527717_3529298_-|oleate-hydratase
MKKEYGNSQVYFVGGGIASLAGAAYLVRDCDFPGQNIHIIEEMKILGGSNDGAGSGEQGYVIRGGRMLNDEAYENLWELLSTIPSIDHPGQSVREEITAFDDANPTHANARLINKNGEVEDVLSMGFDMADRLAMGKLIITPEDKMGKARINDWFAPHFFQTNFWYMWATTFAFQPWHSAVEFKRYMLRFMHEFPRIQTLEGVTRTPYNQYDSIILPLHKYLEPFGVDFTLKCTVTDLDFKDGDGITVTKMHVLRQGVPDVIEIAEGDRVIVTNGSMTEGSSLGSMTTAPRLNGKGSSWKLWENIAAKKPGLGNPSSFDDHVDGSKWESFTVTFQDSVFFDLMEKFTRNRAGTGALVTFKDSSWFMSVVLAFQPHFRNQPEHVKVFWGYGLYPDKVGDFVKKRMCDCTGEEIMQELIGHLHFEAHKEEIMATANCIPCMMPYITAQFMPRLNSDRPKVVPEGSTNLAFISQFCEIPDDVVFTEEYSVRAARIAVYTLMGVNRPVEPINQYQYDVRTLFSSFVTSFR
>NZ_CP048429.1|WP_062523907.1|3529482_3530052_-|TetR-family-transcriptional-regulator
MSNSLLTKKALAHSLKTLMEHVPLNKISVKHLVDDCGLNRQTFYYHFQDIFGLLGWIYQTEAVESIAQYRSYNTWTDGFYRIFCYIEANKAFCCNTLDSLGRTHLDAYLYDVTNDLIMGVIEELAGEMEVDVEDKRFIANFYTLAFTGLVIQWMRGGMKDDPKVMIGKLSVLIEGNFTKALHQYEKKLS

Crispr_ID: NZ_CP048429_21

• CRISPR_ID: NZ_CP048429_21
• CRISPR_location: 4017882-4018032
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_21

Consensus_repeat	Method
GGCGTATGGTGAAAGTAACTGAGAAGTAGCTCTA	CRISPRCasFinder

spacers of NZ_CP048429_21

>21.1|4017916|83|NZ_CP048429|CRISPRCasFinder
ACCCTGGCGTATGGTGAAAGTAACTGAGAAGTAGCTCTAGCCCTGGCGAATGGTTTAAGTACTAAGAAGTAGCTCTAGCCCTA

CRISPR arrays and Neighbor proteins around NZ_CP048429_21

CRISPR arrays

The CRISPR arrays of NZ_CP048429_21

>merge|NZ_CP048429|21|4017882-4018032|CRISPRCasFinder
GGCGTATGGTTAAAGAAACCTAGAAGCGGCTTTAACCCTGGCGTATGGTGAAAGTAACTGAGAAGTAGCTCTAGCCCTGGCGAATGGTTTAAGTACTAAGAAGTAGCTCTAGCCCTAGGCGTATGGTAAAAGTAACTGAGAAGTAGCTCTA

>NZ_CP048429|21|19|4017882-4018032|CRISPRCasFinder
GGCGTATGGTTAAAGAAACCTAGAAGCGGCTTTA	ACCCTGGCGTATGGTGAAAGTAACTGAGAAGTAGCTCTAGCCCTGGCGAATGGTTTAAGTACTAAGAAGTAGCTCTAGCCCTA
GGCGTATGGTAAAAGTAACTGAGAAGTAGCTCTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062519869.1|4016791_4017754_+|family-43-glycosylhydrolase	unknown	unknown	gnl|CDD|226449
NZ_CP048429.1|WP_062519865.1|4019110_4021789_+|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl|CDD|224428
NZ_CP048429.1|WP_025705470.1|4010208_4010367_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062519856.1|4028061_4028727_+|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl|CDD|238872
NZ_CP048429.1|WP_020429502.1|4013217_4014096_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP048429.1|WP_062519882.1|4011934_4013137_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270451
NZ_CP048429.1|WP_062519858.1|4026937_4027333_+|hypothetical-protein	unknown	unknown	gnl|CDD|319924
NZ_CP048429.1|WP_062518962.1|4009294_4010065_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NZ_CP048429.1|WP_163704254.1|4023658_4023925_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062519861.1|4023964_4024957_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381302
NZ_CP048429.1|WP_062518966.1|4007872_4008220_+|ribosome-silencing-factor	unknown	unknown	gnl|CDD|376779
NZ_CP048429.1|WP_062519881.1|4026366_4026813_+|DUF3888-domain-containing-protein	unknown	unknown	gnl|CDD|379024
NZ_CP048429.1|WP_062519859.1|4025199_4025859_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP048429.1|WP_062519853.1|4029288_4031118_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519
NZ_CP048429.1|WP_062519864.1|4021938_4023336_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|197775
NZ_CP048429.1|WP_062519871.1|4015093_4016572_+|alpha-N-arabinofuranosidase	unknown	unknown	gnl|CDD|226064
NZ_CP048429.1|WP_062518964.1|4008216_4009152_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225543
NZ_CP048429.1|WP_062519867.1|4018360_4018888_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062518960.1|4010513_4011467_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|226652
NZ_CP048429.1|WP_062519873.1|4014147_4015062_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062519869.1|4016791_4017754_+|family-43-glycosylhydrolase	gnl|CDD|226449	COG3940, COG3940, Predicted beta-xylosidase [General function prediction only].	0
NZ_CP048429.1|WP_062519865.1|4019110_4021789_+|YhgE/Pip-domain-containing-protein	gnl|CDD|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	7.76154e-116
NZ_CP048429.1|WP_062519881.1|4026366_4026813_+|DUF3888-domain-containing-protein	gnl|CDD|379024	pfam13027, DUF3888, Protein of unknown function (DUF3888). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 111 and 149 amino acids in length.	3.27628e-21
NZ_CP048429.1|WP_062519856.1|4028061_4028727_+|SGNH/GDSL-hydrolase-family-protein	gnl|CDD|238872	cd01834, SGNH_hydrolase_like_2, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	7.10892e-42
NZ_CP048429.1|WP_020429502.1|4013217_4014096_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	5.4398e-66
NZ_CP048429.1|WP_062519859.1|4025199_4025859_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.58468e-09
NZ_CP048429.1|WP_062519858.1|4026937_4027333_+|hypothetical-protein	gnl|CDD|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	5.96772e-09
NZ_CP048429.1|WP_062518962.1|4009294_4010065_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.18802e-16
NZ_CP048429.1|WP_062519861.1|4023964_4024957_-|aldo/keto-reductase	gnl|CDD|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	1.43686e-170
NZ_CP048429.1|WP_062518966.1|4007872_4008220_+|ribosome-silencing-factor	gnl|CDD|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	8.42325e-49
NZ_CP048429.1|WP_062519853.1|4029288_4031118_+|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	4.10346e-56
NZ_CP048429.1|WP_062519864.1|4021938_4023336_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	0.000574243
NZ_CP048429.1|WP_062519871.1|4015093_4016572_+|alpha-N-arabinofuranosidase	gnl|CDD|226064	COG3534, AbfA, Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism].	0
NZ_CP048429.1|WP_062518964.1|4008216_4009152_+|MarR-family-transcriptional-regulator	gnl|CDD|225543	COG2996, COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only].	2.20186e-87
NZ_CP048429.1|WP_062519882.1|4011934_4013137_+|extracellular-solute-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.53452e-59
NZ_CP048429.1|WP_062518960.1|4010513_4011467_-|helix-turn-helix-domain-containing-protein	gnl|CDD|226652	COG4189, COG4189, Predicted transcriptional regulator [Transcription].	5.56411e-120
NZ_CP048429.1|WP_062519873.1|4014147_4015062_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.0871e-81

Protein sequences

>NZ_CP048429.1|WP_062519869.1|4016791_4017754_+|family-43-glycosylhydrolase
MSRKKEYSNPLVEQRADPWVYKHTDGYYYFTASVPEYDRIEVRRAGTIEGLRDAEPVVAWRKYETGPLSANIWAPEIHYIHGKWYIYFAAARTTETKEGLFDHRMYALENESANPLEGRWVEKGQVKTAWESFALDATAFQHKGVLYYVWAQKDPDIPGNSNLYISEMENPWTLTGPQTMIARPEHPWETIGFSVNEGAAVLKRNGKIFMSFSASATDHNYCMGLLTADEDSDLLDAASWSKHPEPVFQTSEENGQFGPGHNSFTVNEDGEDVLIYHARNYKEITGDPLYDPNRHTRAQVLEWNEDGTPNFGAPVKDGRK
>NZ_CP048429.1|WP_062519871.1|4015093_4016572_+|alpha-N-arabinofuranosidase
MTTKARILSDMPKSKINKNIYGHFAEHLGRCIYEGIWVGEDSPIPNTDGIRNDVITALKRLNIPVLRWPGGCFADEYHWKDGIGKPETRKRMINTHWGGVVENNHFGTHEFFRLCELLECEPYICGNVGSGTVQEMSEWVEYMTFDGESPMAGLRAGNGREQPWLLKYFGVGNENWGCGGNMRPEYYADLYRRYQTYARNYGDNKLYKIAGGANVDDYNWTEVLMREAGQFMDGLSLHSYTIPGSWEEKRFALGFDNGEWFETMKKSLHMDELITRHSNIMDKYDPEQRVGLIIDEWGTWFLSEPGTNPGFLYQQNTLRDALVAGIHLNIFQNHSKRVQMANIAQMVNVLQALILTEGDKLLLTPTYHVFDMYKVHQDNELLEVSLESPVYSMGGESIPQLSVSASRDEAGRVYISLCNLSHEDSAGLRMELAGTSAGTVTGQILTHSDLNAHNTFEAPVTVAPAAFGGASLKNGVLDCQLPPASVVVLTLE
>NZ_CP048429.1|WP_062519873.1|4014147_4015062_+|carbohydrate-ABC-transporter-permease
MSNQVAQQYDKRPRIKEQDTVKRKSPGISISKYISYLFLIVLCIIWIIPVVFGITTSFRSQSEVVSSGFRLFPKEWIFDNYVSILENTSTAPILRWLMNSLFIATMHTLLVVVVISITGYGYSRMKFKGRDTLFFTLLGISFFPGVVNLIPSYKIIDALGWVNTSWAMIIPGLAGMGNIFLVRQFMNGIPKDLDESAHVDGAGHFRIYFSIILPLIKPVLIVCALFSFTGSWNDFLWPVIVFTDVDKMPVTAGLLLLQDIYGNYRMIGQLMGSAVLAIIPTLLLFLFAQKYFVQSINLNSGIKG
>NZ_CP048429.1|WP_020429502.1|4013217_4014096_+|sugar-ABC-transporter-permease
MKKKLNLAPAFFVGPHVILFAVFILLPTFYGIYASFTKWNLMNEPVWVGLDNYKTILFDSGSTFHTQFNNGLKNTFIFVLLSVPLLIVIPLLVAVALEHKKVKGKSLIQSIIYVPGLISISAGALIWLLLFNKQLGMAGNVFGSDVSWPANQPYAWILIIIITIWGGVGGNMIIYRASISGVSQDLYESAEMDGAGTIRRFTSITLPSIRFPLIYTFVMTTAGAFNVFGQPLMMTDGGPRQSTHVLMMYIRQLAFGNGESIAGMASAMAVLLGLVILVISALQYYVMNRNAA
>NZ_CP048429.1|WP_062519882.1|4011934_4013137_+|extracellular-solute-binding-protein
MLSTLLAGCGEDNSKTITFWTPLTGDDGAYMDQLVKDYNATNPEIKVKHVITSDMYTKLSTVLNSGKGVPDLTIIHADRVPGYVKQGVLEPMTAVTTAQPEIKQENYLPQAWSTGTIDGTQYTVPLDIHSNVMYYNKDLLKKYHAESFLDDNVVTIDEMLSLQGKLDEGDYVVNDALLGWVILAQIQDLGGDIQENGKPAVNTPVMKQAFENVKKINDAGLMTPFGEDGYLMFQSGNVLFSTDGTWSSTAHAGVEGLNFGVTNVYSPTADKFTNRSSSHLFSMMKNKDRSEEKVAGIGNFLEFIRENSIEWAKAGQIVASKQVNESPDFKNYIQSFFTSSEKEIESLYIYTYEYYPYIAEAVDTYCGDIVRGNVDIDETLQTMQKFVEDKIAEGTGGAAK
>NZ_CP048429.1|WP_062518960.1|4010513_4011467_-|helix-turn-helix-domain-containing-protein
MIYIKDLMSGIDIFKALSSEIRIQILELLATNQALNLNEIAKKLNLSNGAITMHIKKLEESGLIEINTSVGKHGIQKVCYLNKDKLMVDLRSKETDNLYEVEIQVGHYSNYHAVPTCGLATKDSIIGDFDEPRYFADPQRIDSEIIWMAEGFLEYRIPNYLKANQSFREIQFSMEIGSEAPGFNDNYPSDLYFYVNGIEIGFWTSPGDFGDARGTFNPDWWPPHLNQYGMLKLIRINNEGSFIDGCRISDITLDDIKLDYKSELTFRIAVTDKPANKRGLTIYGKHFGNYSQDLLARVLYDVHEVEEVAGPTLTRAE
>NZ_CP048429.1|WP_025705470.1|4010208_4010367_-|hypothetical-protein
MREGMIPTVLGTVVTASSAAFLGSRYKMAATGILGFGLAHIVLGAIDLFEHR
>NZ_CP048429.1|WP_062518962.1|4009294_4010065_+|class-I-SAM-dependent-methyltransferase
MSSYGKFAYVYDELMADMPYPDWLAFAETAWSKYGKPLTVAELGCGTGSITIPLAASGYHMTGIDLSSDMLSVAQMKMERHPQGRRFLREGSVRWVRQNMKEWELPEPVDSVISFCDCLNYVLEEQDIRSVFECTYAGLKTGGTFLFDVHHPNTLIRYEEEQPFVLDEPAVSYIWTCEMDVPRREIEHHLSIFAREEGGSGLYRRFEETHIQRAYDPEWMTEELRKAGFSEVKVYADFEWVEADDSAGRLFYVAVK
>NZ_CP048429.1|WP_062518964.1|4008216_4009152_+|MarR-family-transcriptional-regulator
MSLIAGTTVTLEVLREVSPYGYFLGEGGQDVMLHYTELVGSKPKIGDKVEVFIFFDTEDRLAATMKKPFLTLGEMALLEVADIHPRLGCFLEMGLGRQLLLPIRELPELIELRPQVGDKVFVLMEHDKQGRLRAKLAGEQELAPLALPAPASWMGQTVKARVYKPLQMGTFVLVDGGVLGFGIIGMVHSSERSRLLRLGEEFEARVSHIREDGRVNLSMSQRKEIGRDVDSAALLDFLKERPGGAMPYSDATPPEIIKQRFGISKSAFKRALGKLMKEGLVTQKENWTYLARSEEDGTDQEQSKENGLPES
>NZ_CP048429.1|WP_062518966.1|4007872_4008220_+|ribosome-silencing-factor
MTIESSKLLQLALKAADDKKAMNVVALDLRSVSPISDYFVICHGNSDTQVQAIATEVRKVVHEAGGVIRGIEGMDAARWVLMDLGDVIVHVFHRDEREYYNIERLWSDAKVVEPV
>NZ_CP048429.1|WP_062519867.1|4018360_4018888_-|hypothetical-protein
MFKRKSVYLFPALVLLLLSLVTTASTVGTRAEAQSGDKSQELTVYIHALKSKDGHTVMTADQIEWYEGAEADRIFAEREPDAAAELGGTPDGYYIVNDSDSLTSYPIADNAGVTMQIYDHTGHMEDLDINWNESISLHKFIGEFAKTGIIDLSQSPYHITIQAGKVTSIVQQYTP
>NZ_CP048429.1|WP_062519865.1|4019110_4021789_+|YhgE/Pip-domain-containing-protein
MAAVWRIYKKDWLGLFKAPVALLLIAALALLPSVYDWVNVAAVWDPYSNTSGIQIAVASVDQGAAVDGKSFNIGDEVLESLRSNKSLGWRFTDVKSAERGVQRGDYYASIVIPAEFSQRMAGVLEGELVKPEVDYTVNEKINAIAPKITAKGASTITAQISERFTETLSSTVLTALSAIDREFQAELPVIRKVEQGLFQLEASLPEIEKAGRLVLKLQHDWPQLADSAGRMAALTDKLPEVEQAGQAAELLDEHWGQISDAAGRLQELQGRLPDLARAAELLSGLDVDFSRVGEILDRASDRLEEAGKVVAAAAQALPQTDRIAAAGPAFGQELQQYLAQNRAAFTAVPQVLQQNLHLLQQNADSAALLASQLAEGTAPPDAAAASRLQLAADRLTAGSGALQHTAALFAAVNTLAPGAVPGSELRALAGARASWAAGAAQAARLAAALRGGGGLDPAALAQLGRDSAKGAAALGGILARYSAEGQSALQGTLQQLTSVAGTAATALQQAPQRLAALGAVLDEAGTAIQYGQAGLAALRDNLPAAAGEVSAAAAGMNSRLAAFTGFVTEVLPRIQNGLPAAGDNIHEAAEFARNDLPGAEEKFRRASEWITAGLPRADRGVNRAAELVRNDLPALEHAVRRAADTVREIKREVNLEEIAQLLGGDIKGTSDFLASPVVLKEKALYPIPNYGSAMTPFYVVLSLWVGGTLLISLLRTAVDTGGIPYRRYQLYFGRLLTFLTVGIFQALIAVLGNMYLLNCYVADKLWFTLFAVLISIVFVTIVFTLVYVFGNIGKGIAIVFMVLQFSSSGGAFPISTTGRFFQILNPYMPFTYAISLLREAVGGILPEVAVRDALYLVLFGILALVLALTLQKPLERFIRRAAEQAEASKLIS
>NZ_CP048429.1|WP_062519864.1|4021938_4023336_+|helix-turn-helix-transcriptional-regulator
MQLKNTIQAKLDAYLKREGITINQFAGISGVNSGTLSSIINGNRPVAVKQLDRITAGMGLPEGEWYELYIDEYVVRSTPDWRRLGPFLQRCAELDKLECIRQVVRIIMDNISYAQAVFEMGEEWFAQGKRQAAALLYESVAESEKYQHSERLALCQYRLFKIALGKDQEANLRAAMHFEYFVERLDEADQLNALKDLANIYASLHRWNNVDVIAEVMGRKASIQYQNKYHKASRRAVSKETGRPLCFYILYSYLLRSAVCAEHGDYGQALHYVSRYSDFSWVQERTEEARQIMEQFREWAEANTYLYRLMSGETAVLADYVEFISTRENEIIPGLTKIMQAANRFGLNVDPIIERFESRAGFKEQRTRMGKRNVQVTEDQYAVLLYELSVYYLKNQRVHRGLVYLFQSLDLSVRMNSDSGIVGCVALFEQYRHLSSVEDRERYKILIGEVQKINEKKIGAAAGNR
>NZ_CP048429.1|WP_163704254.1|4023658_4023925_+|hypothetical-protein
MKSWVSDNICLGRNLTLKLTLFIAIDKQTGERLHTSIPQPSERIKEAATKLDQAVYQVKLRLRVVTPTLVFRQSCVDKKTANYDYVLS
>NZ_CP048429.1|WP_062519861.1|4023964_4024957_-|aldo/keto-reductase
MQTRILGQQGLKVSSIGLGTMGMTMAYGPSNENEGIATIRRAYELGVNFFDTAELYGYGNGHNEQLLGKAVKDFRDKVVLATKFGFDMTAEQLGTRFNSRPENIRKVAENSLRYLQTDYIDVFYQHIPDPDVPIEEVAGVVGDLIKEGKVKYFGLSNTGSKTIRRAHAVTPVSVLQTEYSIFEREIEDDILPTLNELGIGLVPYSPLGRGFLTDAVKPSHEYAEDDMRRFDERWQGENYIYNLKATEQLKELASNKGISVAELALAWLLNQGENIVPIPGTRSVTRVEQNINAVNVNLTEADLGRIKEILPHGSAGSRYPAGMIENFTRD
>NZ_CP048429.1|WP_062519859.1|4025199_4025859_+|TetR/AcrR-family-transcriptional-regulator
MERQIEKQHQMRQKLTNRLLLHVRKNGFQGLKMDEISKIMNISRATLYKYFSTKEDIITFIVSSFVEYIHEIIEDSGSDQVFVQRFQQTFEQTILLKEYITDIFLRELENSYPENYERLKEAMKQREYQELAFYDEGIKEGFFNKIDGRLIIMQDEILSNVLDVKYLMENHLTVYQVLFDYYNLKKFQLFKPDKIKMMDDNLMIPRIEHMAQKISKNLY
>NZ_CP048429.1|WP_062519881.1|4026366_4026813_+|DUF3888-domain-containing-protein
MIRVIIAVVLTVTLSLSSPLQSNAEASYRVPQEDSEELRLQDMLLNFLTPYINDAVRDYYRRLLVESPLVYPYFVNVVDSMRINGFRGFNLSITLDVTPVVGPHISVGEDRLTFQISVGPEVKLVNYTHLKSYELPPHWQNIVKKPVK
>NZ_CP048429.1|WP_062519858.1|4026937_4027333_+|hypothetical-protein
MINGRILGIAYNVVPVKDAKKSAKWFVSHFGFNVRNDRGNYISLFRDNRPIIDLIESDNDTRAIFEVNGRSRWIVTFFTDDIESLHTRLISEGVNARQVSDEGIYGKFFVFEDLDGNLFDVWEHKDCELIF
>NZ_CP048429.1|WP_062519856.1|4028061_4028727_+|SGNH/GDSL-hydrolase-family-protein
MSTFSGKSKVFLFQGDSITDGNRGRDEDPNHILGHSYAYIIGGRLGNELAEQKPVFYNRGISGNRISDLYARWNEDAIYLQPDVLSILIGVNDLWRMMKGEPSGVTDRFERAYRHVLEETREVLPQTKLVLCEPFILKTGAPAEAWDEWSKHMTFYQQVVRALAEEFGAVHVPLQAAFDAAASRADAAYWLWDGVHPTHAGHDLIANEWLSVAGKAGLLNS
>NZ_CP048429.1|WP_062519853.1|4029288_4031118_+|sensor-histidine-kinase
MKLLRQWGGLIWSKWSERFYQVSIKQRVLLSFIVLITLSISAMGVLTYRIAGKEIQNNAFDTSQETVDKTLQLLDYRLNDVAMSVQSLMLSDAYRQMMIDVQAHDVTNYYVHLSEMQYVLSQATFNEPMIENVLIATPIGDFYSTTQVRAQDNSFYGSELYDNSKKSPGGYWAKGHYDRLFTGSQRVVSFVVRGIYENTPITNVFIVVNLRENKIASLLGQGTSGNDRKYLLLNTEGETVVQTGWPAQGEPPKAPEFLQASTEDSEGNFFYPFDGENYLVNYKQSAVAPNWILAGMQSKDQLLGQLKGVQRAVLYVILVFLLTTWFFSNKLTAALLRPLFKLSRLMRRVEENQLSVSFESKYNDEIAQVGFQFNRMMTEIKTLIEDVRQKEKGKRHAEIRALTAQMEPHFLYNTLNTIYCKSVMGENDDVNEMILALSQMFQLGLGGGQDLITLEDELSHVQQYCAIQQKCYENLFEYHAEAEAEELLSCLIPKILLQPLVENSIQHGFSDRRSGGCIHVRISLEQSMLHIVVEDNGKGMDAAKVEQGMAKREISKKGYALVNIRHRLQLYYGDEARMELSGQAGVGSRTDLWIPLSPLREEGGNYGIS

Crispr_ID: NZ_CP048429_22

• CRISPR_ID: NZ_CP048429_22
• CRISPR_location: 4068487-4068561
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_22

Consensus_repeat	Method
AGGATACTCCATAAGTCGAATGAG	CRISPRCasFinder

spacers of NZ_CP048429_22

>22.1|4068511|27|NZ_CP048429|CRISPRCasFinder
TCTGATTAGTGAACCTTTTTCCCACAT

CRISPR arrays and Neighbor proteins around NZ_CP048429_22

CRISPR arrays

The CRISPR arrays of NZ_CP048429_22

>merge|NZ_CP048429|22|4068487-4068561|CRISPRCasFinder
AGGATACTCCATAAGTCGAATGAGTCTGATTAGTGAACCTTTTTCCCACATAGGATACTCCATAAGTCGGATGAG

>NZ_CP048429|22|20|4068487-4068561|CRISPRCasFinder
AGGATACTCCATAAGTCGAATGAG	TCTGATTAGTGAACCTTTTTCCCACAT
AGGATACTCCATAAGTCGGATGAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062519188.1|4066391_4068059_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270299
NZ_CP048429.1|WP_062519201.1|4077934_4079194_+|tyrosine--tRNA-ligase	unknown	unknown	gnl|CDD|237360
NZ_CP048429.1|WP_082722508.1|4064431_4065379_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
NZ_CP048429.1|WP_062519203.1|4079550_4080132_-|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|129813
NZ_CP048429.1|WP_062519205.1|4080386_4081253_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062519206.1|4087752_4088940_+|MFS-transporter	unknown	unknown	gnl|CDD|341030
NZ_CP048429.1|WP_157243751.1|4055258_4055777_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062519193.1|4069989_4072317_+|glycoside-hydrolase-family-95-protein	unknown	unknown	gnl|CDD|379625
NZ_CP048429.1|WP_062519197.1|4073789_4075289_-|amidase	unknown	unknown	gnl|CDD|180608
NZ_CP048429.1|WP_163704367.1|4073038_4073506_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_CP048429.1|WP_082722529.1|4052597_4054229_-|MFS-transporter	unknown	unknown	gnl|CDD|129794
NZ_CP048429.1|WP_062519811.1|4060173_4062462_+|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225117
NZ_CP048429.1|WP_074648776.1|4081571_4087739_+|non-ribosomal-peptide-synthetase	unknown	unknown	gnl|CDD|341301
NZ_CP048429.1|WP_083351124.1|4055990_4059878_+|hypothetical-protein	unknown	unknown	gnl|CDD|269893
NZ_CP048429.1|WP_062519199.1|4075565_4077206_-|cellulase-family-glycosylhydrolase	unknown	unknown	gnl|CDD|365907
NZ_CP048429.1|WP_062519817.1|4054436_4054955_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP048429.1|WP_062519822.1|4051447_4051882_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP048429.1|WP_062519820.1|4051971_4052445_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP048429.1|WP_062519185.1|4065394_4066300_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP048429.1|WP_062519190.1|4068660_4069803_+|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl|CDD|238141

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062519188.1|4066391_4068059_+|extracellular-solute-binding-protein	gnl|CDD|270299	cd13581, PBP2_AlgQ_like_2, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	5.77325e-163
NZ_CP048429.1|WP_062519201.1|4077934_4079194_+|tyrosine--tRNA-ligase	gnl|CDD|237360	PRK13354, PRK13354, tyrosyl-tRNA synthetase; Provisional.	0
NZ_CP048429.1|WP_082722508.1|4064431_4065379_+|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.38098e-118
NZ_CP048429.1|WP_062519203.1|4079550_4080132_-|TIGR00730-family-Rossman-fold-protein	gnl|CDD|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	2.69449e-57
NZ_CP048429.1|WP_062519206.1|4087752_4088940_+|MFS-transporter	gnl|CDD|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.18022e-67
NZ_CP048429.1|WP_062519193.1|4069989_4072317_+|glycoside-hydrolase-family-95-protein	gnl|CDD|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	2.07448e-56
NZ_CP048429.1|WP_062519197.1|4073789_4075289_-|amidase	gnl|CDD|180608	PRK06529, PRK06529, amidase; Provisional.	0
NZ_CP048429.1|WP_163704367.1|4073038_4073506_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.64137e-11
NZ_CP048429.1|WP_082722529.1|4052597_4054229_-|MFS-transporter	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.16843e-60
NZ_CP048429.1|WP_062519811.1|4060173_4062462_+|AraC-family-transcriptional-regulator	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.19684e-23
NZ_CP048429.1|WP_074648776.1|4081571_4087739_+|non-ribosomal-peptide-synthetase	gnl|CDD|341301	cd17646, A_NRPS_AB3403-like, Peptide Synthetase. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	8.36517e-156
NZ_CP048429.1|WP_083351124.1|4055990_4059878_+|hypothetical-protein	gnl|CDD|269893	cd14792, GH27, glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.	1.17828e-91
NZ_CP048429.1|WP_062519199.1|4075565_4077206_-|cellulase-family-glycosylhydrolase	gnl|CDD|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	3.96941e-31
NZ_CP048429.1|WP_062519817.1|4054436_4054955_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.18654e-09
NZ_CP048429.1|WP_062519822.1|4051447_4051882_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.34387e-17
NZ_CP048429.1|WP_062519820.1|4051971_4052445_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.20272e-13
NZ_CP048429.1|WP_062519185.1|4065394_4066300_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.60104e-60
NZ_CP048429.1|WP_062519190.1|4068660_4069803_+|SGNH/GDSL-hydrolase-family-protein	gnl|CDD|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	2.70803e-22

Protein sequences

>NZ_CP048429.1|WP_062519188.1|4066391_4068059_+|extracellular-solute-binding-protein
MKKNLLVLLMLVTVCTLVISGCSGKNNTQSPSGTATGSGNTADASKPVEVSVFAVQESGIDIPTNKFTAFVQDKFGIKFNWQINPSDGAKEKRQISLASGDYPDAYLLTAYIDEFSQGDVLKYGQQGVLVPLNDLIDKYAPNIKAAMEKHPEMKTLNTAPDGNIYGLGAYAECFHCSYPNKMWINTEWLKKLNLKEPKTTEEFKQMLEAFKTKDPNGNGKADEVPLSGSTEDFGVRIIPYLMNSFVYDDDRNYLNMTDGKVESAAIKPEWKEGLTYIKSLYDAGLIDPGAFTQNAEAFKKIGENADAEILGAGAGMHPAIFINIDPGNTRSAHYNALAPLTGPKGISYTTHDAGGVSPGAKFVITNKASEEAKVALIKMVDYMFTPEGQTNAASGMKGIDWTDPAEGDVALGKDVKPVIKQIPMAEGEAPRNAGWSGMGHFYMPKEYRDTFVQATDIYASNGYERRLYNASLLYQGHEPKELFPIWSIWIDPAEIDEASMLQTNLRNYIEQNELQFITGNKDLNKDWDAYVQGLKDLKLDRYLEILQKAYDASVK
>NZ_CP048429.1|WP_062519185.1|4065394_4066300_+|carbohydrate-ABC-transporter-permease
MAASAAVPPKIRESVGDRIFLAVVYTVLILVVIVVLYPLIFIISSSISSPAAVTSGRVWLWPVDISFKGFKVLFSTHEIISGYANSIFYTAAGTLISVTLTIMIAYPLSRRAFFGRNALMMIITFTMIFSGGLIPTYMVVRELHLIDTRWALLIPNAIWVWQVIIARSFFQSSIPEELLEASEIDGCSDMRFIRSVVLPLSKPIIAVLVLMYAVGQWNSYFDALIYLKSADLFPLQLVLRSIIIQNNSAGAMDAMAMVERQQMAELLKYALIVVATLPVLVIYPFVQRYFVQGMLVGSVKG
>NZ_CP048429.1|WP_082722508.1|4064431_4065379_+|sugar-ABC-transporter-permease
MSTRTVPRSKGQGWLHTAGKNMMKHWQLHLLVIPPLLFFLIFKYYPMANAVLAFKDYNVIKGIWGSPWVGLKHFELFFENPLFWTLVKNTILLSGYLLLAGFPIPILLALMINEIRGGRFKRFVQLISFAPYFISTVVMVSIIMLFLAPRLGFANIALNFFGLNSVNFLGEPDMFRSIYVWSDIWQTAGYSAVIYLAALAGIDPTLYEAAKVDGASRFQKIRHVDLPGIVPTIVIILILNVGNVMAIGFEKVYLLQNPLNIANSEIIATYVYRIGLLNANYSFATAVGLFNSLINLVLLVTVNGLAKRITNNSIW
>NZ_CP048429.1|WP_062519811.1|4060173_4062462_+|AraC-family-transcriptional-regulator
MLKYSKVFRRFLISYIVILIIPSIGGYMSYRTSIAVTESISIENSVIQLQKSQEILERRMAEVEGLTRQLAVNPELNVLLNERGRETNVYGIWRTMRNVLTFGQTNDFLQDYYIYLANYDLVLTPGSSYRPEHYYEIFHYNDLPQAEWKKQVLEKTHRSEIRPLSAFVSKGAQTSVITYMQSLPLDSFNDSSPAVVVVIIDEKIIASLLSGLTERYGGWVHISDADGKTIVLQGKDEPYMSRLNADSSFDKGKVSQFYQDDLVITTRSDTNGWVYQAGIPRSILLENANKIKYMSWLITGGALFLGLLAGLVLAYRNSAPINRMLSVMKEQFGKEETVEQSEFDFLSGNIANMITKNKLLESELHRQLPLVRDAFIKRLIAGEFESREEIVSAAAQADIGLNQGTGYAGIIQINGYSGMDSVEILNELNAARLLVKQALAALTGPLPMADMGSDKMVCLFFSGSGESAADQEVAVTHIMENLTQLVLKEYRISVQAGFGSYFASVTEVSGSFEQAKQALEYAVYMNKKGILWNHEAQIENTTYYYPLDTEQRLISTLRAGELAEATRIIDAIFAQNLGERELSIEMKHQLIGEMKGTFLKLLDQKTFMESPLFESAKRRIIDISSTEPLDHIQAGFHAIMEGLCGYITNKKKDAHTQIIKQIYQYTEDMYSDSELTLYRVAEHVERPEKYISQLFKEVTGVNYSDHLIKVRMDQAAVLLKDSRYTVDEIAARVGYNSSHSFRRAFKRLTGISPSTYRQSHAE
>NZ_CP048429.1|WP_083351124.1|4055990_4059878_+|hypothetical-protein
MAKKIGISLLLFMMVAVQAGVAGTARNAAEAADKALAQKPYMGWSSYSMQVYDPAGNWISAESIKKQSDAMHEKLQAHGYEYINIDAGWNGGMDEYGRPLPNTERYPDGFQEVIDYVHNNGQKIGIYLIPGLSIEAYNNDLEIYGTNGECRVRDIAVQPLKIMDYWNSYTYKIDFSNPCAQKYIDSIADLLREWGIDFVKFDSVTPGSGINNLSRDARGDVEAWSKALAKHDIWFELSWALDHNYVDFWKKYANGWRIQWDVESYDSSVGLTQWANIARLFPDAAIWWRDAGPGGWNDFDSLNVGNGAMDGLTKDERKTAMTFWAVSAAQLYLGNDMTRLDDYGLELLTNDEVIAVNQAGHPAHPVSMDTQQQVWFANNGDGTYNVALFNLGSRSAAVDVKWSDIGLAGPASVRDLWSRSELGTFDTGYSGGVLEPHASRMLKVTAKSGTSIVNDDDTNVRYTGAWQRNGGKEQTPGSQDITVKITDSAGAPGDGQPGGELPPNPVTRSVYINDNDSGIVYNGTWSSQSGRTAGDYGADVHYTETEGDSFVYTFKGTGIDLLTEKDSSQGDVLVYLDDAASPQTVSTYTPGTKEVQQVVYSATGLADGEHTLKVVKGSGQYMLLDALKISVNQLLNPVTGTFDKAPDKQADVAVTLPAGSDSLLEIKNGGSALVKGSDYTVSGGVVKIKKEYLFNLPSGAAELMFFFDGGASGGLMVNITGSALVRYSMINNDDPAIVYNGSWSRSTGRGMGDYKDDVQYTEKNGDSFEYTFRGTGIQLYTETDTSQGDMDIYVDNQFQQTVSAYHDGRQAQQNLFSITGLPEAFHTLKAVKKSGTFMLLDMLKVEIPDLVSPVEAAFDKAAPADIEVKLLRQPELFGGISQGAYKLAEGTDYTLTGDTVTLKAAYLDAQSGGSLQLKFSFNGDYQNDVHFTETDGDYFEYTFSGTGIALLGPKGPDMGNMEIYLDGAPVQTVSAYSDNRQILQNLFSLEKLTDGAHVLKAVKKSGTLMFADQLKFTVSAGGTDPGEQPTPTPTPSPTPTSTPISTPTPSADSTETPGRVNPGPVATAAPSAAPSASPSATPAPSASPQAEQDAVMKHSAYMSGYPDGSFKPDQKITRAEMAALLFKAAAGEKQGAAAAFSDVPAGYWAAEAIAGAVEMGLMTGYPDGSFKPKEQITRAEMASLAAQLSKSNDVPGGGFTDVAAGHWALSAILQAQGAGILNGYADGTFRPGKALTRAEAVTAVNRALGRGPLFGAKASPWSDVPLTHWAFKDILEASTAHAYKDRAGGGEELSE
>NZ_CP048429.1|WP_157243751.1|4055258_4055777_+|hypothetical-protein
MAGKHVVLLNGEMRGINTSEFGVSGLRGEMRGINTFEFGVSGVRSEMRGINTSEFGVSGVRSEMRGINTFEFGASVPRSEMRGINTFEFGASGLRSEMRGINTYEFGVSGVRSEMRGINTSEFGVSGVRSEMRGINTSEFGASGPRSEMRGINTFEFGVSGVRSEMRGINTS
>NZ_CP048429.1|WP_062519817.1|4054436_4054955_+|MarR-family-transcriptional-regulator
MDTQDSQERKLLIALENIKRLTTRPQLFASIPRAEFLTMFVIHASMQKAEQEKEASPGVMISKLSELLQISRPTASQMISSMEEKGYTRRVMSTSDRRVIYICLTEKGQAVLQMNLARYSSVLNEIIEKVGRKEIDQLIFLCDRFQEVVNEVKPRLLHNLQSAEEHPVEEPV
>NZ_CP048429.1|WP_082722529.1|4052597_4054229_-|MFS-transporter
MEHLTQKKKVTIMIALMAAMFFAAINQTIVGTAMPRIIAMLGGIEHYTWVITIYMLTSTIATVLVGKLSDIYGRKPFLLAGIIIFVIGAFLSGLSANIFQMITYRGIQGIGGGILMSATVTAVGDLFAPRERAKWTGIMMAMFGFSSVIGPTLGGFMIDHMAWKWIFWIFLPLGIVAFVMIWRMFPKTTRAASESIDYLGSVFLSLSIVALLLGFSWAGTQYDWGSPQILSLFAAAVVFAVILILIERKAKSPVLPLSLFKNSIISLSMIIGFLMNAGMMGAMIYLPFFVQGVEGVSPTNSGFINMPMSLMMIVLSTLVGRWISKSGKYKRYALIGMPFMVAAMLIMAFMNSIAMAVASMIIFGIGLGLAMPVFTLTVQNAVAPAMLGVATATSTLFRNLGGTIGIAIMGTVMNTTLTHKLENAVHSGQGPDMSKLDAESARQLSAFMNPQMLLDQPKLKELHATLPEQIRPLFNQLIEMLRSALSDSLTVVFLSGTALLVIAALLVVFLKEIPLRSSEARTEVKAGENAADSKLKEQAPAVQ
>NZ_CP048429.1|WP_062519820.1|4051971_4052445_+|MarR-family-transcriptional-regulator
MTDEMDDYENIDALIEAFQQFSRLNWRRNSISSLKPSELRMLVSIRQGNEREGRKGQTVSDLSKQLKVTSPTVTQMVNSLISQGYAIRTTDAQDRRISEITLTDRGEHLAELVTVRTHETFKGMIDYLGKEPSDTLRQLLNSVYDYFEQLNNRQDEF
>NZ_CP048429.1|WP_062519822.1|4051447_4051882_+|MarR-family-transcriptional-regulator
MNNAVDVIELEMAILVRRLVSMTTYKKTGNLDRSAYLLLYQIDSYGSAGVKALSDEFHLDISTVSRQAAALEQKGYVRRIPDPIDGRAYSLEMTEAGLEVLNENKKARQDSIGKMLSNWSDGERVIFGELLRKFNTAILEEASE
>NZ_CP048429.1|WP_062519190.1|4068660_4069803_+|SGNH/GDSL-hydrolase-family-protein
MVYVNSSGSSSISLRRGLPGMRSKLAGTAPLTVAFLGGSITEGAGASDADAASWRALTGQYLQSVYAGHPVRCINAGAGGTTSTFGAHRLEEHVLREGPVDLLFVEFSVNDGEDREESVRGMEGIVRQCRRLSPDTELCFVYTAADKNLTGYKPFNIAVHEEVAEHYGIPSVDCAARVYTMIHTGELNWQKFAPDGYHPLDAGHALYAGLVREYLEQALVQDRVLPDGGLEKRTTIPVPLDSRNYEYGRMLDFSTADYSAAFHVRELQSDEPLMNWRFSTSHAWTDDPQAAFTFTVYGQCAGLVLLCGPDTGIFEYSLNGEPFTEVNLFDDWCLQAYRPVLALFPLRGKRGELLIKVRNTERKDSRSTGTGFRVLKLLCS
>NZ_CP048429.1|WP_062519193.1|4069989_4072317_+|glycoside-hydrolase-family-95-protein
MNDFKLWYSTPASGWSQGLPLGNGRIGAVVMAAPNREVWSMSEATYWSGQTDPEPAFAGGKDVLEEMRQQFFAGNYEAGDRLAKQYLQPQKQNFGTNLGVCEVVIAFAEQGQESWEAGSFRRELDLTNAVAGAVCQGNGSTMYREVFASHADHLVASRIWSGHPGGVSFTLGLEGGTASFSVLGVDDGTLEFKGQATETVHSNGACGVWAKGMVKVSVSGGTVHSRDGRFTVTGADEAHIYFAVSTDYRRNGADWEAESRQMLEQAMAKGYDQLRKEHIADYSQQYSKVNIQLGFSGRASLPTDQRIQLLAKEGGADDPQLFALFLQYGRYLTIAGSRGDSPLPMHLQGIWNDGEACRMGWSCDYHLDINTQMNYYPAEITNLGDSHLPLMRYIEDLAQAGRSTARNLYGSGGWVAHVFSNIWGFTLPGWETSWGLNVTGGLWLAIHLIEHYEYSQDREFLERQAYPVLKEAAAFFLDYMSIHPKYGWLVTGPSNSPENSFYPGDPGEGAQQLSMGPTIDQILVRDLFEFCLKSAELLERDEELRRKLQEAIFKLPPLQIGKRGQLQEWLEDYAEAQPEHRHLSHLVALYPGNQITPDRTPELSRAARVMLENRMLQDELEDVEFTAALFGLGFARLHDGEKAYKHISHLIGSLCFDNLFTYSKSGIAGAETNIFVIDGNFGGTAVIAEMLLQSRADELHLLPALPEAWNTGSVSGLRAKGNMEVDIFWEEGQLSTAQFRTFSPGMVTVRSGGHRITFYAEAGGSYTLNRRLERL
>NZ_CP048429.1|WP_163704367.1|4073038_4073506_+|GNAT-family-N-acetyltransferase
MLSICAAGIEDLEAMSALLSELFALEADFAGACNTDKQKAGLELILNHPDRGVLMLLKRDVKVVGMVNLAFGFSTFEGGPVIMLEDFIVSAEERGRGSGRFFMERIVGYAKANGFLRITLLADAGNARALHFYETAGYRYSNMKCLRLGLNEDSS
>NZ_CP048429.1|WP_062519197.1|4073789_4075289_-|amidase
MTLSAYSTYDALGLAALVRAREVSPRELVEAAFARLDEVNPLLNAVVRTRREAALKEADAMPADDPARPFAGVPFLLKDISQAIGGEPLTSGALLLKDNIAKRDSNYVARIRAGGFIPLGHTNTPEFGLKNITEPLLHGPARNPWNTDRSPGGSSGGAAAAVASGIVPAAGASDGGGSIRIPASFTGLFGLKPTRGRTPVGPGVGRQWQGASIDFALTRSVRDSAAMLDLLQTLQPEAAFQTPLYPGVYRDDLMKPLQRKLRVAYTTASPVGTPVSGEAVAAVLKTVKWLQAEGHEVEEKLSPVNGVRLMENYYTMNAGEVAAMFLSLENGLGRSIEAHEVDIVTWVLGEAGKKVSAAEFVHSLNEWDVAAAQMAGLLNRYDLYITPANADSAPEIGELTQQPEEIEALLHVSELPKEAQQRMIYEMFEPSLTYTPFTQLANLTGQPAMSIPLHLTPAGLPIGVQVMASKGREDLLLQLAAQLEQSELWVGMKGNPLFP
>NZ_CP048429.1|WP_062519199.1|4075565_4077206_-|cellulase-family-glycosylhydrolase
MQASKHFSFRITGILALTFILILSLSIPQKQAAAAGTSVKGFHVSGTNLIDATGSPFVMRGVNHAHTWYKNDLAAAIPAIAATGANTVRIVLSNGGQWSLDSLSDVQNILALCDQYKLTAMLEVHDATGSDNVSTLNAAVNYWISIKDALIGREDRVIVNIANEWFGSWSTPAWASGYQSAIPALRAAGIKNTLVVDAAGWGQYPSSIFTSGNAVFHSDPLENTIFSIHMYEYSGGSAATVKSNIDNALAIGVPVIIGEFGWKHSGGDVDEAAIMSYSQEKGVGWLAWSWYGNGGGVEYLDLASGPAGSLSDWGTSVVNGPYGTKATSVLNKIYTTPGYVPVPDNGTTPTPTPTATVTPTATPTATPTATATATPTPAATATPTATATPSATPTATPGALALYYRAADTNVNDNQIKPHFNIKNNGSSAVSLSGLKIRYYFTKDGTQALNGATDWAQPGAAHITLAFGTANAAAADSYVEVGFTPEAGSLQAGEQTGDIQLRLFKSDWSNFNENNDYSFDAAKTAYSLWDHITLYQNGTLVSGVQP
>NZ_CP048429.1|WP_062519201.1|4077934_4079194_+|tyrosine--tRNA-ligase
MNIIDELEWRNAINQQTDAEGLRELTNTKSVSLYCGVDPTGDSMHIGHLIPFMVLKRFQLAGHRPVILIGGATGTIGDPSGRQSERSLQTLEQVQANVDALTAQMKKLFVTESDNQVRMVNNYDWTHKINVIEFLRDYGKNFSINTMLAKDVVSSRLDSGISFTEFSYQILQSLDYLHLYQHEDVQLQVGGSDQWGNITSGLDLIRKKEGADAKVFGLTIPLMLKSDGTKFGKSAGGAIWLDPKKTTPYEFYQFWANSDDRDVVKYLKYFTFLTREEIEALAEKVQTEPHKREAQKALAEEMTRFVHGEELLEQAKRITAALFSGDIRSLTAEEIEEGFKEMPTYTSGKESKNIVDWLVDLGIEPSKRQAREDITKGAISLNGERVTELGVEVTAEDAIGGRFIIIRKGKKNYSLVKLA
>NZ_CP048429.1|WP_062519203.1|4079550_4080132_-|TIGR00730-family-Rossman-fold-protein
MKSIAVFCGSRDGASPVYKESAHALGKVLAEHGITLIYGGATVGLMGEVADAALEAGGDVIGVIPHFLKSREIEHKHLTELILVDSMHERKLKMSELAEGFIALPGGPGTMEEYFEIFTWAQLGLHRKPCGILNVHHYYDPLIALFDQMAREQFMPDKHRSMVLTDVSPGGMVRQFLNYSPPPVKTYLTDERT
>NZ_CP048429.1|WP_062519205.1|4080386_4081253_-|hypothetical-protein
MPQKLAVIVIHGLGNQHKDFADKFIEEMHKTFSAVSGEKEPGQRIVIKPVYWASVFANREEELMKCLVGSPYNLRYKELREFMIHYLADAVAYQPLEDGKDNYEAVHKTISTQLNILSAEAGPDAPLCVISHSLGTVIASNFFYDLQYGHRKPPILNPDSALERGDTLSLFYSCGTTLPLWGLRFPELDKPIQVPSKGFSAQHPQIPGEWINFYDKDDVLAYPLKSIHPAYDKVVTEDRDVNVGTLIKSWTPLCHNGYLKSSSVITPIAEGLDRLWQQINVKALQPQE
>NZ_CP048429.1|WP_074648776.1|4081571_4087739_+|non-ribosomal-peptide-synthetase
MFVRSSSASSGTSQAVYQLVSNVTGHRIEDLNPDMYLEDDLGLDSIKMITLMNELIGLVPAEQMDAFTAAYPVTALMGLQSVGELVQIFEEWEHARRLGAEVQTAASTVLQAQEETWSELAAVQIQSAAPDLREQLKIEVCRLISSITGHKSEDLHSDMELERDLGLDSIKMITLMSGMVSLLPADSSGGHSESNLVTSLMSMHTVGDIVEMLAVRKEGNSGNLTVAGDENPVVTEIPENDPEFLEILHSQYLFLITYLSVANLTITSGVRLRGRLDAESLRKSWSEVILRHPVLRAVFIAERADASLKGYRLQLLKTAVPPEIPVLDIRHLDEQARRQWTSERFEASLNEKIDITRWPLHSLSVIQTADLEYELILDISHMISDGLGNQQILRELLEIYGAKSHNKAAKLRPALPAGEYNRIVSEINAWNAPGEMEALDRYLQQQGRGAYFFNPFGTSRKADAAGTAGAVIHSRKYWVGEEITARLIASTKTWRTSLFILLVSAYLKTIKQQGEERNRIILNLPTSGRLYPHTDASEVLSAFAQNLALSFTCGDASEEWESLIDRTHEEFTNQLSSGIDRAQTYRAAQYAKDTIHLQNGVMPEAVASMIRSTLKSNLYLSFVGNTSIHKQYGNYEVYDYEAYTGTNPGTIDCLAELFQGRLMFTANYDSSFFDDDYIGEHMDRFMDNLSQLAGMEPAGKPVPATVDTGEPQSAEIRERLYGIAREICGTALDEEALFKDMEAELGMDSLQRIRLITRLGKVFGHADKASLLECRTLNEIITQITHVNNAIEPAGRDSAVEIPYLHISRQCKATPDAVAILDGTGEVTYRELDEQSNRLAHYLISQGVRSQSLVGILTLPGRLMLTGILGILKAGAAYVPLDPMYPADRIEYIAEHAQLSILLTEQSLQKQADPIVQKSPSIQKVVYLDEGYEARGHFEQSGTEEWQNCPAGDLRVDSAPHDLMVVLYTSGSTGKPKGVMLNHRGYMNRLEWHQQTFNLQPGERVAQKTSCCFDISVWELLWPLMYGGTVCPVRQEVVKNPWSLARWMTDTGINVMHFVPSLFGEFVDSLEDESYTFPALRWLIFSGEGLPLSPVQKWMDRYGRKTKLANLYGPTEASIDVTFHIISGRPGSAGELSIPIGKPIPGVYIKNLDEHMREVPEGELGELWIGGIQLAKGYLYNPEKTREAFHPNPFPEIPGEFIYRTGDLTVKKADGSYEYHGRIDNQVKLRGFRVELGEIEAVLGSHDQVAEAAVIVTQPAPGQQVLLACLAGKQVPDQEIKDFAVRKLPYYMIPHRLEWLPRLPKNPNGKLDRKALSVMFSGTGQAPQASQAPQASQAPQAPQASELLVPPAEREPLSAGDLLPLAPAQSWLMNYFEDPYCWAGYTRFLYKQPLDFQQFKQAAMMLNRRHDALRSILERKDHGFEQRFLQGELGGNVDFYDGSHMEEAERNEEIQLILTKAVQGFRVDQWPLWRIIVVQVSEAVYEIAAVGHHLISDVVTNQLLLQEVWQIYASLSPGARHISLPDAKPFADFVRAVQEKKRIHGKEYAGYWSTHFPPESVCRLPADFIKGPNDEQSAATQRFTFDREQTSLLLTKAKKHFKSNVYPILLAPLYKEMSVFFGQPEVVVSHRVHGRELGGGQNFMQTPGNFAVNFPLGINVEKDSPWSNLIASIRKGLENVPLGGVSYDLVSENLPRYMYPDVKLTPIRANYLGNRDAPRLPDLEFSREGMDRRFSLPGQKRISVIEFFFSIEEGKLTVEIEYSANLYAAATIQGLAEQYMEQALELMASIQDTPVLPPARREGLLANKVAVITGGSRGIGRSIALSMAGEGADIVLVSRSGQQLRETADEIRRLGVKAMSVSADVSDAPSVNKAVEQIIERFGLIDILVNSAGITGMAAMADMSPEVWESIIQVNLLGTYHFCYAVIPYLIKQKQGKIINIGSDSSFIGYPMMSAYAASKHGVLGLTRALSEELKNSNIQVNAVCPALVDTGMAPAAFKGRAIPPSGVADSVVFLASPRADYITGEAVQINGKQDMHWFGAQQMQLLQAVQRRQP
>NZ_CP048429.1|WP_062519206.1|4087752_4088940_+|MFS-transporter
MEQKTHVTGRLGDLFGGGKAVIYGIALLVGTSVGVINPLSTTHMTANHGQEIWIGVISSSYFFFMALGSMVADRTMRGTDMKLVITSGLLLTAVCSALFPLFTVNAVWLLLMSLMGIGISCNMMGLQTALHSLTGEKSLGMVSGIYSLCFALGLIASSALAPQVYDRVAWLPFAFSSFCLVLASAIIYFKLPGALVIPGRSGEKVLSKVNLPLFGAFVYGFGETIVVSLYPLYLIREHVAVAQTGYGLSIFAVGSILGLLPVTYLADRIGCKRCLILCAAISIFTLLGIVTSGSMPLRLLFSFASGFIIGPLYPLAMALTAQELTPGERSSGNALFTTFYGFGSAAGPFLSSVAMNAWGNQHLFTVCVLLFCLFLAHAAITRKGSKVRVTKEEIL

Crispr_ID: NZ_CP048429_23

• CRISPR_ID: NZ_CP048429_23
• CRISPR_location: 4153285-4153466
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NZ_CP048429_23

Consensus_repeat	Method
CCGCNAGCCCCGTCCGTC	CRT

spacers of NZ_CP048429_23

>23.1|4153303|20|NZ_CP048429|CRT
TGCTAGCTCTGGCCATCCAC
>23.2|4153341|31|NZ_CP048429|CRT
GCGGGCCCCAACCGTCCCCCAGCCCCGTCCG
>23.3|4153390|20|NZ_CP048429|CRT
TGCCAGCTCCGGCCATCCAC
>23.4|4153428|21|NZ_CP048429|CRT
GCGAGCTCCAGCCCCGTCCGT

CRISPR arrays and Neighbor proteins around NZ_CP048429_23

CRISPR arrays

The CRISPR arrays of NZ_CP048429_23

>merge|NZ_CP048429|23|4153285-4153466|CRT
CCGCCAGCCCCGTCCGTCTGCTAGCTCTGGCCATCCACCCGCGAGCCCCGTCCGTCGCGGGCCCCAACCGTCCCCCAGCCCCGTCCGACGCGAACCCCGTCCGTCTGCCAGCTCCGGCCATCCACCCGCGGGCCCCGTCCGACGCGAGCTCCAGCCCCGTCCGTCCGCCAGCCCCGTCCGTC

>NZ_CP048429|23|2|4153285-4153466|CRT
CCGCCAGCCCCGTCCGTC	TGCTAGCTCTGGCCATCCAC
CCGCGAGCCCCGTCCGTC	GCGGGCCCCAACCGTCCCCCAGCCCCGTCCG
ACGCGAACCCCGTCCGTC	TGCCAGCTCCGGCCATCCAC
CCGCGGGCCCCGTCCGAC	GCGAGCTCCAGCCCCGTCCGT
CCGCCAGCCCCGTCCGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062518919.1|4150714_4151452_+|NAD-dependent-protein-deacylase	unknown	unknown	gnl|CDD|234777
NZ_CP048429.1|WP_062518917.1|4149908_4150682_+|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|372595
NZ_CP048429.1|WP_062518911.1|4145894_4147580_-|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|234861
NZ_CP048429.1|WP_062524846.1|4160821_4161358_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524854.1|4155754_4156741_+|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl|CDD|224012
NZ_CP048429.1|WP_062524858.1|4153481_4154339_-|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380391
NZ_CP048429.1|WP_062519358.1|4139286_4141092_+|penicillin-binding-protein-2	unknown	unknown	gnl|CDD|274573
NZ_CP048429.1|WP_062524850.1|4158638_4158899_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062518913.1|4147882_4148923_-|hypothetical-protein	unknown	unknown	gnl|CDD|226122
NZ_CP048429.1|WP_062524852.1|4156805_4158386_+|UDP-glucose--hexose-1-phosphate-uridylyltransferase	unknown	unknown	gnl|CDD|235382
NZ_CP048429.1|WP_062518909.1|4145551_4145827_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_143013446.1|4161357_4162899_+|flotillin-family-protein	unknown	unknown	gnl|CDD|225177
NZ_CP048429.1|WP_062518915.1|4149127_4149868_+|hypothetical-protein	unknown	unknown	gnl|CDD|315383
NZ_CP048429.1|WP_062524856.1|4154574_4155753_+|galactokinase	unknown	unknown	gnl|CDD|235407
NZ_CP048429.1|WP_062518921.1|4151589_4152591_+|L-glyceraldehyde-3-phosphate-reductase	unknown	unknown	gnl|CDD|381377
NZ_CP048429.1|WP_062524845.1|4162991_4163699_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP048429.1|WP_062524843.1|4163691_4165308_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062519362.1|4142499_4143879_+|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|200582
NZ_CP048429.1|WP_062524848.1|4159355_4160519_+|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341466
NZ_CP048429.1|WP_062519360.1|4141052_4142258_-|AI-2E-family-transporter	unknown	unknown	gnl|CDD|274334

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062518919.1|4150714_4151452_+|NAD-dependent-protein-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	2.70314e-114
NZ_CP048429.1|WP_062518917.1|4149908_4150682_+|HAD-IA-family-hydrolase	gnl|CDD|372595	pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase.	2.9008e-23
NZ_CP048429.1|WP_062518911.1|4145894_4147580_-|dihydroxy-acid-dehydratase	gnl|CDD|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP048429.1|WP_062524854.1|4155754_4156741_+|UDP-glucose-4-epimerase-GalE	gnl|CDD|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP048429.1|WP_062524858.1|4153481_4154339_-|AraC-family-transcriptional-regulator	gnl|CDD|380391	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain. This family contains bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included is MmsR, a bacterial transcriptional regulator thought to positively regulate the expression of the mmsAB operon. The mmsAB operon contains two structural genes involved in valine metabolism: mmsA which encodes methylmalonate-semialdehyde dehydrogenase, and mmsB which encodes 3-hydroxyisobutyrate dehydrogenase. The cupin domain of members of this subfamily does not contain a metal binding site.	2.95831e-28
NZ_CP048429.1|WP_062519358.1|4139286_4141092_+|penicillin-binding-protein-2	gnl|CDD|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	1.30495e-87
NZ_CP048429.1|WP_062518913.1|4147882_4148923_-|hypothetical-protein	gnl|CDD|226122	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism].	5.67298e-17
NZ_CP048429.1|WP_062524852.1|4156805_4158386_+|UDP-glucose--hexose-1-phosphate-uridylyltransferase	gnl|CDD|235382	PRK05270, PRK05270, UDP-glucose--hexose-1-phosphate uridylyltransferase.	0
NZ_CP048429.1|WP_062518921.1|4151589_4152591_+|L-glyceraldehyde-3-phosphate-reductase	gnl|CDD|381377	cd19151, AKR_AKR14A2, Salmonella enterica aldo-keto reductase (AKR) and similar protein. Salmonella enterica AKR is a founding member of aldo-keto reductase family 14 member A2 (AKR14A2).	0
NZ_CP048429.1|WP_143013446.1|4161357_4162899_+|flotillin-family-protein	gnl|CDD|225177	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown].	2.15526e-88
NZ_CP048429.1|WP_062518915.1|4149127_4149868_+|hypothetical-protein	gnl|CDD|315383	pfam12695, Abhydrolase_5, Alpha/beta hydrolase family. This family contains a diverse range of alpha/beta hydrolase enzymes.	4.44957e-69
NZ_CP048429.1|WP_062524856.1|4154574_4155753_+|galactokinase	gnl|CDD|235407	PRK05322, PRK05322, galactokinase; Provisional.	0
NZ_CP048429.1|WP_062519360.1|4141052_4142258_-|AI-2E-family-transporter	gnl|CDD|274334	TIGR02872, UPF0118_membrane_protein_YtvI, sporulation integral membrane protein YtvI. Three lines of evidence show this protein to be involved in sporulation. First, it is under control of a sporulation-specific sigma factor, sigma-E. Second, mutation leads to a sporulation defect. Third, it if found in exactly those genomes whose bacteria are capable of sporulation, except for being absent in Clostridium acetobutylicum ATCC824. This protein has extensive hydrophobic regions and is likely an integral membrane protein. [Cellular processes, Sporulation and germination].	4.91188e-44
NZ_CP048429.1|WP_062519362.1|4142499_4143879_+|polysaccharide-deacetylase-family-protein	gnl|CDD|200582	cd10959, CE4_NodB_like_3, Catalytic NodB homology domain of uncharacterized bacterial polysaccharide deacetylases. This family includes many uncharacterized bacterial polysaccharide deacetylases. Although their biological function still remains unknown, members in this family show high sequence homology to the catalytic NodB homology domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), which is an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Like SpPgdA, this family is a member of the carbohydrate esterase 4 (CE4) superfamily.	2.09091e-79
NZ_CP048429.1|WP_062524848.1|4159355_4160519_+|iron-containing-alcohol-dehydrogenase	gnl|CDD|341466	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction is 50-fold lower than that in the forward direction. The NADH-BDH has higher activity with longer chained aldehydes and is inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases. This family also includes E. coli YqhD enzyme, an NADP-dependent dehydrogenase whose activity measurements with several alcohols demonstrate preference for alcohols longer than C3. The active site of YqhD contains a Zn metal, and a modified NADPH cofactor bearing OH groups on the saturated C5 and C6 atoms, possibly due to oxygen stress on the enzyme, which would functionally work under anaerobic conditions.	0
NZ_CP048429.1|WP_062524845.1|4162991_4163699_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.25574e-54

Protein sequences

>NZ_CP048429.1|WP_062518921.1|4151589_4152591_+|L-glyceraldehyde-3-phosphate-reductase
MVYVASDERYEGMRYNRTGRSGLKLPAISLGLWHNFGGIDTYEKGREMITRSFDLGITHFDLANNYGPPAGSAEEMFGKVLARDLAPYRDELIISTKAGYYMWPGPYGDWGSRKYMLASLDQSLKRLGLDYVDIFYSHRPDPETPLEETMGALDTAVRSGKALYVGLSNYTAEQTVEAIRILNSLGTPLLIHQPRYSMLDRWIEGGLQDVLEEHGVGSIAFTPLAQGLLTSKYLNGIPEGSRAAGPSAFLNESRITPEVLRKIHALNQLAVSRGLSLAQFALLWTLRGGRVTSALIGASRVSQIEENIAALSHGEFSQEELDRIETILKTDSE
>NZ_CP048429.1|WP_062518919.1|4150714_4151452_+|NAD-dependent-protein-deacylase
MDPLQTLVSWIKDSGSIVFFGGAGTSTESGIPDFRSAAGLYQTQHNSPYPPEVMLSRSFFMSSPDIFFDFYRSKMIHPEAKPNGAHQLLAQLERDGKLKAVITQNIDGLHQLAGSQRVLELHGSIHRNHCMDCSRYYGLDQVLASGTGVPRCPECGGIIKPDVVLYEEELDHDVLVESVAAIAAADLLIIGGTSLTVQPAASLITYFRGRHTVLLNGDPTPYDHQADLIITDRIGAVMGKVQELL
>NZ_CP048429.1|WP_062518917.1|4149908_4150682_+|HAD-IA-family-hydrolase
MAVLHVNDLAIPCKGILFDKDGTLLDLLATWGTWADLVLKGLENQLAFIGKDNSGSGRGLARVLGTVHDDAGQVIGYDPAGPLSMATAEETNGILAWQLYTAGVPWNEALAKVTAIGKEAMNELRRLRKAQPLPELLPFLRQCAAASLKLGVVTSDGAVTTSEQLEWMGITGYFDTIVTRDRVTHGKPAPEMAETACRELGLDPGETVIIGDSNADMQLGKGAGLRLSIGISPAGSTAHLLEADTVISGYHQLRLTI
>NZ_CP048429.1|WP_062518915.1|4149127_4149868_+|hypothetical-protein
MGKKLTKRRVLLGIFAILIAAGFFLWRYLTPYAPEEKAESALVSANGVRVEQNDNWISFEPSVTLGAAVIFYPGALVAAEAYAPLAKKIAAAGHPFYIAKMPLNLAVIKSDAAGEIIRVHPKLSFVLGGHSLGGVMASRYAAEHADQLKGVYFLASYPDEKGSLKDTTLSVLSILGTEDQVVDQDKYNKGRSYLPGNTVYYSVKGGNHAQYGSYGEQKGDGKAAISEEEQQTLTARAMLDWMGNLR
>NZ_CP048429.1|WP_062518913.1|4147882_4148923_-|hypothetical-protein
MVANSSLTARGETFFLNLRFMLIVTVFAGNAIEPLIHSLSGMHSLYLWIFSFHMPLFVLVTGYFAGKSLTGAAGRKVLLQIGLQYLIFQTLYSVLDVSVFHAANIHHSFFAPYLLLWFLASHACWRLLMLGMGRWSRAAQIIFSVSAGVAVGYLQLDGIWFSISRTFVYLPFFVIGYHFSFEAFARLYNKYVKIAAAAASVLLLLLLGTLGSELPLGWLYGSMTYMQLDAPEWYAGVYRLGMYGLQLAASLAFLGWVPHRLSRMTDWGRRTLYVFLLHGFVVRLAAVSGIYAYLGNAAGATLVLLCAVAFTVLLAQPAVKRWLHPLVEPSVDWMISLQRAALRRSL
>NZ_CP048429.1|WP_062518911.1|4145894_4147580_-|dihydroxy-acid-dehydratase
MAVKKMRSDMIKKGFDRAPHRSLLRAAGVKEEDFGKPFIAVCNSYIDIVPGHVHLQEFGKIVKEAIREAGGVPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADSLETVVSAHWFDGMVCIPNCDKITPGMMMGALRVNIPTIFVSGGPMKAGVDSKGKKLSLTSVFEGVGAHQVGKINDDELLELEQYGCPTCGSCSGMFTANSMNCLAEALGLALPGNGTILAVAEERKEFVRKSATQLMELIKLDLKPRDIVTKESLDNAFALDMAMGGSTNTVLHTLALAQEAEIDYPLERINEVANRVPYLSKLAPASDIFIEDVDRAGGVSAVLNELLKKPGAIFGDCMTVTGKTLAENVTGHEILDTTVIHPLDNPYSEVGGLSVLYGNLAPEGSIIKVGAVDASVGGYHKGPAICFDSQEEALEGIANGKVKEGHVVVIRYEGPKGGPGMPEMLAPTSQIVGMGLGAKVGLITDGRFSGASRGISIGHISPEAAEGGPIAFVENGDIIELDLNNRKIELLVDEEVLAVRRAGWKGFEPKVKTGYLARYSKLVTNASKGGVLKI
>NZ_CP048429.1|WP_062518909.1|4145551_4145827_-|hypothetical-protein
MCFKGFLAKTPARRITDVGSQELRNNGISAVVTELFCCGGTNNGISAVVTGLWRCDGTNNGISAVVTGVWRCAGTNNGIFAVIAGGAMAAG
>NZ_CP048429.1|WP_062519362.1|4142499_4143879_+|polysaccharide-deacetylase-family-protein
MQTLLLWLFYISTFYAFIPGMISRIFGYRVFRKGMGRREFALTFDDGPDSLYTPLLLDLLKRYGAKATFFVVGSHAEQNPEIIKRMHDEGHLIGIHNYVHKTNWLMRPATVKRQIQRTDDIIFSITGERSTYYRPPWGIVNLFDFSKRRQVQIVLWSAMFGDWKEKLGAERLTEKLLAKLNPGEVMLLHDCGTTLGADLKAPEHMLIALERLLQEAERRGLRSIRIDEMIKMVQSSPIQKLSFGKRLIVGLWLAWEQVFQLMLRIKTISPADPFLHYRIRKYQGGPIQMEGGELLTKGDKVIELHIDNRQLFELGIHSRSSAQLAIRMIRRMEKDMPVLAQRIAGDIDLAEAKALYGVSMINRGPEKFGFMVLDLPKGWFARSAKFYLSVLLSVIHPAGGSRLKERSEVLVPKMMLMPVSQLLDQMNQQRPQKQVKPREQLREEDLSLEAELPAATVIH
>NZ_CP048429.1|WP_062519360.1|4141052_4142258_-|AI-2E-family-transporter
MLPLYKKYWRTIFDIGLVVLTVYLVMFAFSTVYRLAAPVFLSFFVFLMIEPLARFLNRRGMAKPFASAISVILFLIVLLGVLFGAGLLITMQALKFQDDLPRYTYIVQQQFAETTTYLQHKIDALPPDLTDKINGYFKQATNVLSGWLVIFLKYMIGVLGSFSSFMANFGIAIILAFFLSMEIKDWRKIAHDKMPKTFKTAYAFLQGNVFKAIGSYLKAQLILISITFVIVLVGLFILRSGNEITMALVCAIFDVLPLLGVSTILIPWIVYLFIIGNTSLAIGLIVLLAVVLIVRQLLEPKITGNSIGVSSAFLMLSFVILSSSIFGFAGLILSPILLILLKELLQQGYLQRWIFLPKEEFIVSPFAAPGEPSTPGGDAVSGSGEPDGIHAPEGSASSSNT
>NZ_CP048429.1|WP_062519358.1|4139286_4141092_+|penicillin-binding-protein-2
MALHKLIHKRIFWGSLILCLLVAVLIVRLAWVQLLLKDRKVPGAEYSMARMAAIQSEREVVLDSGRGRLYDRNGQPLAGETVWTAAFFPRDEAEADAEESAAGREKLQQLATVLGVTYEQLQAGRSGLKEPLLWPSGSGKNPLELTPGQAEAVDALGVGGVRALPFARRYSGEATGRQWLGYLSEAKAAEVKKSPTGLRIPWTGTDGLEKTLEPLMQGVGHTEAYAQVDARGNRLPDSPIKVRAPGNPYYPLSLYTTIDKKLQENIEKLAVKSGVKEGAVVVLDTKTGDIEAMVSLPFYNPAQISPEGGEWNNRALQAAVPGSIFKIVTAAAALEAGVTSPEEKFYCSGHYGKYGLSCLKGKGHGTLTMAQGFAVSCNTVFASLAERLSGAQLQSAALALGLGRDISWQAENTLGLPLLRPLSGEQPGAVFTTLLPDDGGARVQTAIGQRDVRVTPLQAANLLVTLLHGGEVHAPRILQRVAFANGQTLKELPGHLAPSAQGRISPPTARVLLSLLRKVVTGGTGKSLQGTKWPLAGKSGTAQTWVKGMPRNNQWFIGYGPAGQPRFAVSVLVENVAPGSPHAATRLFGQVFELLAEPSGA
>NZ_CP048429.1|WP_062524858.1|4153481_4154339_-|AraC-family-transcriptional-regulator
MEHTYSVGSNPVVYDRQHLHVLFAGESQTLPLHQAGPKIYDYYLMHFIESGFGAFRTEERKYELGPGDCFLIHPGQLVSYVSDEAQPWRYRWAAFTGTDADALVLQTGFTPQKPVLSTTEGSVFPGALAGMMRAFYTGKESAHLTSLGYLYLLVGEAAELLLASSRLPGAESQVKRTVKQMIHYMAAQYAHPVSIEQMCASLGYNRAYLSRIFKQETGLSPVTYLLKLRIEKSRLLLRERPELSVEQVAASVGLTDALYFSRQFKRFCAQSPTAYRIATARHGEK
>NZ_CP048429.1|WP_062524856.1|4154574_4155753_+|galactokinase
MSVQDLKGKFIEKYGESTEEARVFYAPGRVNLIGEHLDYNGGYVFPAALDFGTTLIVRPRSDGKVQFASTNFPYEASIDYSEIGKAKTGEWVDYPVGVMVELAKKDLPVAAGYDLLFHGEIPNGSGLSSSASIEVVTGFAFLTLLGGNTDTVEIALLSQRAENQYVGVNSGIMDQFAVANGKRDQAILLMCDTLEYSLVPFVTGSYKLVISNTNKKRGLVDSKYNERRSQCEEALAILKQEVPGLSYLAELAPEQFEAHKDKITDETVQRRARHVVEENQRVLDSVEVLKQNDLKQFGLYMNDSHVSLRDLYEVSCEELDVMVEEAQKIPGTLGSRMTGAGFGGCTVSLVHENDVERFIREVGEAYRTRTGLTGEFYVCGIGNGVEELKGVE
>NZ_CP048429.1|WP_062524854.1|4155754_4156741_+|UDP-glucose-4-epimerase-GalE
MAILVTGGAGYIGSHTVAELLERGEEVVVIDNLLTGHREALLGGKLYEGDLRDKVTLNKLFSENKIDAVIHFAASSLVGESMKDPVKYYDNNVYGTQCLLEAMQQAGVDKIVFSSTAATYGEPEKVPIEETDRTEPANVYGETKLTMERMMAWFDKVLGIKYVALRYFNAAGAHASGKIGEDHRPESHLIPLVLQTALKQRESIAVFGDDYPTEDGTCVRDYIHVSDLADAHVRAVNYLRSGSASNIFNLGNGLGFSVKQVIETAKKVTGLDIPVVIQERRAGDPAVLVASSDKARSVLGWNPQHADVEGIIQSAWNWHSANPQGYGE
>NZ_CP048429.1|WP_062524852.1|4156805_4158386_+|UDP-glucose--hexose-1-phosphate-uridylyltransferase
MDNEKSAAPAAQKALHAIEQLVLFASHQQLIQPADADYSRNALLDQFGFSEPYAAEFTEAPLESPQAPLDVLIDYGFETGLIPENTDTYRDLLDAKIMGLLMARPSEVNSEFYRLSAEKGIEAATDRFYKLSIDSNYIRMDRISKNVFWLQDSPYGDIEMTINLSKPEKNPKEIAMARLLPPPVYPKCLLCRENVGYAGRLNHPPRQNLRVIPLKLNNENWFLQYSPYVYYNEHCIVFHHDHVPMKLTKDSLKRLLSFVEAFPHYFIGSNADLPIVGGSILTHDHFQGGRHTFPIQKAPKEVTFTHAAYPGVSLSIVKWPMSVLRLNGTDPAVLLECGNEIYEAWKVYSDPEAEVLAASEVDGEQTRHNTVTPIVRRSEDGGFEMDLVLRNNRTSEAHPEGIFHPHREMHHIKKENIGLIEVMGLAILPGRLKEELDAIAGILAGDTALLEGVQSQADHVLAQHASWVQELVSRFGTAMEREEAVKAVQNEVGIKFTHILEHAGVYKRTPEGQAAFRRFAHSLGFR
>NZ_CP048429.1|WP_062524850.1|4158638_4158899_+|hypothetical-protein
MPGNNGRNAVVGESKAGLPRNNGRNAVVGASKAGLPGNNGRNTVVGVPKASLPGNNGRNAVVIALKAGLPGNNGRNTVVGVPKAEF
>NZ_CP048429.1|WP_062524848.1|4159355_4160519_+|iron-containing-alcohol-dehydrogenase
MRKFEFYNPTKLIFGQGTLSALQTEVPKYGKNVLLMYGGGSIKRSGLYDNVISGLKAAGAVVTELSGVEPNPRLSTVHKGVALCRENNIELILAVGGGSVLDCAKAVAVGAKYDGDMWDFVERKAAPQGALPLGTVLTMAATGSEMNNGSVITNEVTKEKMGWGSVHAFPAFSILDPENTFSLPRDQTVYGMVDIMSHVLEHYFHTDGNTPVQDGFCETLLRTVIETAPKLIEDLNNYELRETIMYCGTMALNGMVSMGFAGDWATHNIEHAVSAVYDIPHGGGLAILFPHWMKYNLSTNPARFRQLAVNVFGIDAAGRSDEEVGLEGIEALRRFWDSIGAPKSLGDYDIDGSEIGSMADKAVRFGPFGNFRKLQREDVVEIYTMAL
>NZ_CP048429.1|WP_062524846.1|4160821_4161358_+|hypothetical-protein
METLYLGCLALGVIFAVVSVLLGDLIGSALDGIFDVVSFHFISPAVLAGGITVFGGAGILLTRYSSLDNGPILALSLLTAAFMSVVMYLGVVKPVNKSEMSSGFSMNELPGKIGEITVPVPAQGYGEIMVKFGAGNSLHTAASFDHHPLPAGSKVVVVEVEDGVALVSEFEQRRGVDA
>NZ_CP048429.1|WP_143013446.1|4161357_4162899_+|flotillin-family-protein
MFGLPDFLFIPAVVIAVLLVLGIAFWARYKTVGPDEGMIVTGSFLGSNHISDDGSGRKIKIVRGGGAFILPVFQKAEFMSLLSHKLDVTTPEVYTEQGVPVIADGVAIIKVGSSTEDVATAAEQFMGKPIDALKSEAQEVLEGHLRAILGSMTVEEVYRNRDRFAQEVQGVAARDLKKMGLQIVSFTIKDVRDKHGYLEALGKPRIAAVKRDAEIAEAEALRDARIQKANAEEQGQKAELLRDTNIAEASKDNQLKVAAFKRDQDTAKAEADQAYHIQEARAKQTVVEEQMKVELVRKEREIDLQAKEIQVREKQYDAEVKKKAEADRYAVEQAAEADKAKRMREADALQYSIETQARATSEQKRLEGQAVADAELAKGKAESEVIRLRGLAEAEAKEKLAEAFQKFGEAAVLDIIVKMLPELAGRIAEPLASIDKLTVVDTGNGEGAARVSNYVTQLMSTAPEMLKSVSGIDVEALIKGLTKGKTHTPASSGPAVTQPAASAPVALAEKREE
>NZ_CP048429.1|WP_062524845.1|4162991_4163699_+|ABC-transporter-ATP-binding-protein
MQLVLDNIRKSFENKTVLKGIDFTFEQGKIYGLLGRNGAGKTSLFNCLSGETRMDSGGAFLRRNEVSLPLREEEIGYVFSLPILPEFLTGYEFVKFYMDINQDKIQSGRTIDDYFDIIRFEQEDRHRLIKGYSHGMKNKIQMLCFIITRPPLILLDEPLTSFDVVVALEIKKLLREMKQDHIIIFSTHILQLAADLCDELVILNNGVLQEIPADTLHSPEFEEQIIALLKDGSHD
>NZ_CP048429.1|WP_062524843.1|4163691_4165308_+|hypothetical-protein
MISTLNTIMKIRGASGANRLLYYFGRLPLIGKLMNDSVYSKTSLKKTFTIVVLILKIIWGFLTKFAYLGLVVYLPIQLAVKELQLADQYDLYLYVLVLLSFGVGTVSNAIILEPKRDKYICVKLMRLPADKYMHAVLALRALTFFIYFVPAMLVFAEAYGAPLWQGLLLSLLLSLWRIAGEALHLWIFDRQGIVLVKKNGFVWIVIGAGYLLAFVPLYMGNSLLDMDSVLFSLPLSLALVVLGAVSALYIARYAGYRNAVDAVTKIDDPLLDMGRMMKEANMKQVETKVKDFSAEKLRPGQFAGKSGFAYLNAIFFSRHKRFLIQPIQRRLVIIGALSAAGLLATYASPDTFSKLARYLISSLPVLVIAMNFTSIGERVCKAMFFNCDLSLLRYGFYRERSAILSNFRTRLLRISGLNLIPAAAISVAVNLLLFLSGERWGVGEALSVSGAVLGLSLFFSVHHLFMYYIFQPYSTELNVKNPFFSIVNSIVLAVGVVCMQFQSTPARFAIVVVLAAAAYMLIALFLVYRYSDRTFRVK

Crispr_ID: NZ_CP048429_24

• CRISPR_ID: NZ_CP048429_24
• CRISPR_location: 4174071-4174144
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_24

Consensus_repeat	Method
AATTAGTTACCCTTTTTCCACTT	CRISPRCasFinder

spacers of NZ_CP048429_24

>24.1|4174094|28|NZ_CP048429|CRISPRCasFinder
AACCTGCGCGGAATATGATGCACGAGCA

CRISPR arrays and Neighbor proteins around NZ_CP048429_24

CRISPR arrays

The CRISPR arrays of NZ_CP048429_24

>merge|NZ_CP048429|24|4174071-4174144|CRISPRCasFinder
AATTAGTTACCCTTTTTCCACTTAACCTGCGCGGAATATGATGCACGAGCAAATTAGTTACTCTTTTTCCACTT

>NZ_CP048429|24|21|4174071-4174144|CRISPRCasFinder
AATTAGTTACCCTTTTTCCACTT	AACCTGCGCGGAATATGATGCACGAGCA
AATTAGTTACTCTTTTTCCACTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062524841.1|4165443_4166313_+|PRD-domain-containing-protein	unknown	unknown	gnl|CDD|170086
NZ_CP048429.1|WP_062524846.1|4160821_4161358_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524816.1|4188444_4188864_+|DUF350-domain-containing-protein	unknown	unknown	gnl|CDD|226289
NZ_CP048429.1|WP_062524840.1|4166639_4168703_+|PTS-transporter-subunit-EIIC	unknown	unknown	gnl|CDD|273923
NZ_CP048429.1|WP_039790804.1|4168802_4169078_+|HPr-family-phosphocarrier-protein	unknown	unknown	gnl|CDD|237503
NZ_CP048429.1|WP_074648268.1|4180945_4183117_+|hypothetical-protein	unknown	unknown	gnl|CDD|173412
NZ_CP048429.1|WP_062524830.1|4176929_4177964_+|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|234780
NZ_CP048429.1|WP_062524823.1|4183727_4184120_-|cytochrome-C-oxidase-subunit-II	unknown	unknown	gnl|CDD|224537
NZ_CP048429.1|WP_062524814.1|4188995_4189541_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_163704371.1|4184427_4185465_+|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NZ_CP048429.1|WP_143013446.1|4161357_4162899_+|flotillin-family-protein	unknown	unknown	gnl|CDD|225177
NZ_CP048429.1|WP_062524838.1|4169070_4170783_+|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl|CDD|224006
NZ_CP048429.1|WP_062524818.1|4186046_4188413_+|endonuclease-MutS2	unknown	unknown	gnl|CDD|234750
NZ_CP048429.1|WP_062524845.1|4162991_4163699_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP048429.1|WP_062524843.1|4163691_4165308_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524836.1|4171418_4173815_+|type-I-pullulanase	unknown	unknown	gnl|CDD|273975
NZ_CP048429.1|WP_062524820.1|4185545_4185893_-|phage-holin-family-protein	unknown	unknown	gnl|CDD|377198
NZ_CP048429.1|WP_062524834.1|4174283_4175888_-|GGDEF-domain-containing-protein	unknown	unknown	gnl|CDD|143635
NZ_CP048429.1|WP_062524848.1|4159355_4160519_+|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341466
NZ_CP048429.1|WP_062524827.1|4178305_4180750_+|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl|CDD|234804

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062524841.1|4165443_4166313_+|PRD-domain-containing-protein	gnl|CDD|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	5.0309e-46
NZ_CP048429.1|WP_062524816.1|4188444_4188864_+|DUF350-domain-containing-protein	gnl|CDD|226289	COG3766, COG3766, Predicted membrane protein [Function unknown].	3.81019e-31
NZ_CP048429.1|WP_062524840.1|4166639_4168703_+|PTS-transporter-subunit-EIIC	gnl|CDD|273923	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for glucose transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, glucose-specific IIABC component" while the B. subtilus enzyme also contains an enzyme III domain which appears to act independently of the enzyme II domains. This family is most closely related to the N-acetylglucosamine-specific PTS enzymes (TIGR01998). [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP048429.1|WP_039790804.1|4168802_4169078_+|HPr-family-phosphocarrier-protein	gnl|CDD|237503	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional.	3.2335e-29
NZ_CP048429.1|WP_074648268.1|4180945_4183117_+|hypothetical-protein	gnl|CDD|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	1.18013e-12
NZ_CP048429.1|WP_062524830.1|4176929_4177964_+|phenylalanine--tRNA-ligase-subunit-alpha	gnl|CDD|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP048429.1|WP_062524823.1|4183727_4184120_-|cytochrome-C-oxidase-subunit-II	gnl|CDD|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	1.68391e-12
NZ_CP048429.1|WP_163704371.1|4184427_4185465_+|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	8.45928e-53
NZ_CP048429.1|WP_143013446.1|4161357_4162899_+|flotillin-family-protein	gnl|CDD|225177	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown].	2.15526e-88
NZ_CP048429.1|WP_062524838.1|4169070_4170783_+|phosphoenolpyruvate--protein-phosphotransferase	gnl|CDD|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP048429.1|WP_062524818.1|4186046_4188413_+|endonuclease-MutS2	gnl|CDD|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_CP048429.1|WP_062524845.1|4162991_4163699_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.25574e-54
NZ_CP048429.1|WP_062524836.1|4171418_4173815_+|type-I-pullulanase	gnl|CDD|273975	TIGR02104, pulA_typeI, pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.	0
NZ_CP048429.1|WP_062524820.1|4185545_4185893_-|phage-holin-family-protein	gnl|CDD|377198	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV. These proteins are predicted transmembrane proteins with probably four transmembrane spans. The 1.E.40 is represented by the mycobacterial 4 phage holin, but it also contains many cyanobacterial. proteobacterial and firmicute proteins. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as in those of the bacteriophage of these organisms. The primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded the enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases.	1.13111e-11
NZ_CP048429.1|WP_062524834.1|4174283_4175888_-|GGDEF-domain-containing-protein	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.15091e-52
NZ_CP048429.1|WP_062524848.1|4159355_4160519_+|iron-containing-alcohol-dehydrogenase	gnl|CDD|341466	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction is 50-fold lower than that in the forward direction. The NADH-BDH has higher activity with longer chained aldehydes and is inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases. This family also includes E. coli YqhD enzyme, an NADP-dependent dehydrogenase whose activity measurements with several alcohols demonstrate preference for alcohols longer than C3. The active site of YqhD contains a Zn metal, and a modified NADPH cofactor bearing OH groups on the saturated C5 and C6 atoms, possibly due to oxygen stress on the enzyme, which would functionally work under anaerobic conditions.	0
NZ_CP048429.1|WP_062524827.1|4178305_4180750_+|phenylalanine--tRNA-ligase-subunit-beta	gnl|CDD|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0

Protein sequences

>NZ_CP048429.1|WP_062524836.1|4171418_4173815_+|type-I-pullulanase
MNSNYINTEKEIETYTGKDLGLTYTAGYSLFKVWVPTAFTVSLVLYQTDGNNIESAVSGDRDSGRIVNMQRQEGGIWQARLHEDLKGMYYMYRAVFEDGTLNEAADPYAKAVSANGVRSAIVDLQDTDPEGWDRDVSPALPHPADAVIYELHVRDFSSAADSGMRYKGKFKAFTEFGLTNSAGQAIGVDHLAELGITHVHLMPVADFQTVNELGMNSERSAEPFFTEYNWGYDPQHYNVPEGSYSTNPSDPGTRIREMKEMVQALHSKGISVIMDVVYNHTYSVEKGPFQPLVPDYFYRHDYTGRLSNGSGVGNELATERPMVRKYIKDSLAYWASEYHIDGFRFDLMGLMDSVTMREIAEELRLEANSDLLLYGEPWTGGDSPLATKTLKGVQKGKGYAVFNDNFRSAVKGDSDGWGKGFATGEYGKEGAVASGIKGAIHEFTDSPVEAVNYVTAHDNLNLWDKMLATQGLRQAARLPELENGRLKYGGSVEAAVAAADPYIGIDPDDILGNETVRRTLLANGIILTSQGIPFLQAGDELLRSKYGDHNSYRSPDAVNAIRWENKGKFLPVFEYYKGLIALRRGHPAFRLHGRQEIERSLEFLRCDSGVVAYLLKNNAGGDAWNNIVVIFNANPGPVSQRLPDTDGCWNIVVDHTAARADAFRSIQDPEVEIEGLSMMVLYDKYGQPEPRSKMIEIRYERPDGDYRGWNLWVWGTGIQDGQHDFRQMENGYAVARIEVLPETSSVGYILRLNDWEEKDGAGDRFIDCSGSKDLVQVTVREREQENSGDKNDPLPMTS
>NZ_CP048429.1|WP_062524838.1|4169070_4170783_+|phosphoenolpyruvate--protein-phosphotransferase
MSKISGIAASAGIAVARAFILEHPDYTITKTAAADVEAEIAKLTDALEKSKAELQSIKERTLAELGEKKAEIFESHLLILDDPELISPVMDKIREEMVNADYALNEVATQFIEMFENMKSAYLQERAADMRDVTKRVLNHLLGIHYVSPAEISEEVIVIAQDLTPSDTAQLNRNFVKGFTTNIGGRTSHSAIMARSLEIPAVVGTKNVLSEVKAGDLVIVDGLSGDVLINPSDAEVAEYKAKQAAYDLQIAEWKKLRDEPTVSADGKHVELAANIGTPNDVNGVIDNGGEGVGLYRTEFLYMGRDKLPSEEIQYNAYRTVLENMKGKPVVVRTLDIGGDKELPYLDLPKEMNPFLGFRAIRLCLDRQDIFRTQLRALLRASAHGDLRIMFPMIATLGEFRAARDLLLEEKAKLREEGKEVSDSIQLGIMVEIPSTAVLADQFAKEVDFFSIGTNDLIQYTMAADRMNERVSYLYQPYNPAILRLVKTVIDAAHAEGKWAGMCGEMAGDSTAIPLLLGLGLDEFSMSATSILPARSQISKLSAAEMKDMAAKALQLSTAEEVAALVQSSVK
>NZ_CP048429.1|WP_039790804.1|4168802_4169078_+|HPr-family-phosphocarrier-protein
MQKTFRIIDEDGIHARPATALVNTATKFKGTESFAEAKGKKVTLKSILGVLSLGLEAGDTLTLITEGSEEAEALSALQEVMVKEGLGELHE
>NZ_CP048429.1|WP_062524840.1|4166639_4168703_+|PTS-transporter-subunit-EIIC
MFKKLFGVLQRVGKALMLPVAILPAAGLLLGIGNMLVNPDFLQYVPALENDVVQAIATVLMNSGQIVFDNLSLLFAVGVAIGLAGGEGVAGLAAIIGFLVMNVTMGTVVGVNAYVLSWKDFAYSSVLGIPTLQTGVFGGILVGILASAMYKRFFRIELPSYLGFFAGKRFVPIMTAVTSLLLGLLLTLIWPPIQHGLNYVSQSMINTNLTLSAFIFGVIERSLIPFGLHHIFYSPFWYEFGSYVDKAGELIRGDQRIFMQQLRDGVEFTAGTFTTGKYPFMMFGLPAAALAIYHEARPENKRVVGSLMISAALTSFLTGITEPLEFSFLFVAPLLFAVHAVFAGLSFMTMHILNVKIGMTFSGGFIDYMLFGVIPNRTAWWLVIPVGLVLAVIYYFGFRFVIRKFNLRTPGREDPSDDIEETNTENVSRSGDDLPRNILSALGGKENITHLDACITRLRVEVKDKAGVDKNRLKKLGASGVLEVGNNVQAIFGTRSDTIKSQIQDVMDGRTPAASPAAAAPQPELEKQAGEEGAAIIPEDIVSPVNGELLDITQVPDAVFSQKMTGDGFAFLSDDGKIASPVYGKVFNVFPSKHAVGIMSDGGKEVLVHIGVNTVKLKGKGFTVLVEEGDLVAAGQPIMEVDLEYVKANAPSVISPVIFSNLPEGSAVTLKKPGKVVIGDKDIISIV
>NZ_CP048429.1|WP_062524841.1|4165443_4166313_+|PRD-domain-containing-protein
MSSITVAKVLNNNVIIAQHPQYAEVVVIGKGIGFNRKVRDLINLSSVEKMFILRNQEEQEQYKQLVPQVDEKLIEVMQEIVLHILQSSRQPLNEHIHIALTDHISFAIRRNEQNIAIHNPFLYETKEIYPEEYSLAEYAVGRINEAMGVRLPPDEIGFVALHIVSALSNRHISEVKEHSLLIGDLVNLVEDHLEYRIPRDSLDYSRLVTHLRFVLERLRRGETVRETSSLDGLMKREYPEMYMLAWKLTKVIEKRVRIPVYAAEVSYLTIHLQRLAQKKEDEADMQQPD
>NZ_CP048429.1|WP_062524843.1|4163691_4165308_+|hypothetical-protein
MISTLNTIMKIRGASGANRLLYYFGRLPLIGKLMNDSVYSKTSLKKTFTIVVLILKIIWGFLTKFAYLGLVVYLPIQLAVKELQLADQYDLYLYVLVLLSFGVGTVSNAIILEPKRDKYICVKLMRLPADKYMHAVLALRALTFFIYFVPAMLVFAEAYGAPLWQGLLLSLLLSLWRIAGEALHLWIFDRQGIVLVKKNGFVWIVIGAGYLLAFVPLYMGNSLLDMDSVLFSLPLSLALVVLGAVSALYIARYAGYRNAVDAVTKIDDPLLDMGRMMKEANMKQVETKVKDFSAEKLRPGQFAGKSGFAYLNAIFFSRHKRFLIQPIQRRLVIIGALSAAGLLATYASPDTFSKLARYLISSLPVLVIAMNFTSIGERVCKAMFFNCDLSLLRYGFYRERSAILSNFRTRLLRISGLNLIPAAAISVAVNLLLFLSGERWGVGEALSVSGAVLGLSLFFSVHHLFMYYIFQPYSTELNVKNPFFSIVNSIVLAVGVVCMQFQSTPARFAIVVVLAAAAYMLIALFLVYRYSDRTFRVK
>NZ_CP048429.1|WP_062524845.1|4162991_4163699_+|ABC-transporter-ATP-binding-protein
MQLVLDNIRKSFENKTVLKGIDFTFEQGKIYGLLGRNGAGKTSLFNCLSGETRMDSGGAFLRRNEVSLPLREEEIGYVFSLPILPEFLTGYEFVKFYMDINQDKIQSGRTIDDYFDIIRFEQEDRHRLIKGYSHGMKNKIQMLCFIITRPPLILLDEPLTSFDVVVALEIKKLLREMKQDHIIIFSTHILQLAADLCDELVILNNGVLQEIPADTLHSPEFEEQIIALLKDGSHD
>NZ_CP048429.1|WP_143013446.1|4161357_4162899_+|flotillin-family-protein
MFGLPDFLFIPAVVIAVLLVLGIAFWARYKTVGPDEGMIVTGSFLGSNHISDDGSGRKIKIVRGGGAFILPVFQKAEFMSLLSHKLDVTTPEVYTEQGVPVIADGVAIIKVGSSTEDVATAAEQFMGKPIDALKSEAQEVLEGHLRAILGSMTVEEVYRNRDRFAQEVQGVAARDLKKMGLQIVSFTIKDVRDKHGYLEALGKPRIAAVKRDAEIAEAEALRDARIQKANAEEQGQKAELLRDTNIAEASKDNQLKVAAFKRDQDTAKAEADQAYHIQEARAKQTVVEEQMKVELVRKEREIDLQAKEIQVREKQYDAEVKKKAEADRYAVEQAAEADKAKRMREADALQYSIETQARATSEQKRLEGQAVADAELAKGKAESEVIRLRGLAEAEAKEKLAEAFQKFGEAAVLDIIVKMLPELAGRIAEPLASIDKLTVVDTGNGEGAARVSNYVTQLMSTAPEMLKSVSGIDVEALIKGLTKGKTHTPASSGPAVTQPAASAPVALAEKREE
>NZ_CP048429.1|WP_062524846.1|4160821_4161358_+|hypothetical-protein
METLYLGCLALGVIFAVVSVLLGDLIGSALDGIFDVVSFHFISPAVLAGGITVFGGAGILLTRYSSLDNGPILALSLLTAAFMSVVMYLGVVKPVNKSEMSSGFSMNELPGKIGEITVPVPAQGYGEIMVKFGAGNSLHTAASFDHHPLPAGSKVVVVEVEDGVALVSEFEQRRGVDA
>NZ_CP048429.1|WP_062524848.1|4159355_4160519_+|iron-containing-alcohol-dehydrogenase
MRKFEFYNPTKLIFGQGTLSALQTEVPKYGKNVLLMYGGGSIKRSGLYDNVISGLKAAGAVVTELSGVEPNPRLSTVHKGVALCRENNIELILAVGGGSVLDCAKAVAVGAKYDGDMWDFVERKAAPQGALPLGTVLTMAATGSEMNNGSVITNEVTKEKMGWGSVHAFPAFSILDPENTFSLPRDQTVYGMVDIMSHVLEHYFHTDGNTPVQDGFCETLLRTVIETAPKLIEDLNNYELRETIMYCGTMALNGMVSMGFAGDWATHNIEHAVSAVYDIPHGGGLAILFPHWMKYNLSTNPARFRQLAVNVFGIDAAGRSDEEVGLEGIEALRRFWDSIGAPKSLGDYDIDGSEIGSMADKAVRFGPFGNFRKLQREDVVEIYTMAL
>NZ_CP048429.1|WP_062524834.1|4174283_4175888_-|GGDEF-domain-containing-protein
MAGFPEIKNTRRLILLFTAISVLLVGISVASLLYLNHTMNKLSGSLYSGVYQNSQLILNADRDLYQASLAFHTAMNGNLTTGEHSRLSQDFQENNAQAEQRLRMASDNINSVKNPFSGMKQSELLLSKLREVLDSIDAPFQIWKDTGTKLMAERVRSGWNAESYSALEANVLLKNVREPLDNCEQLIDDYALQVTQEFRDQKSSLFALYSLFLFLLVLVIIYLCRKLIDLQNEMLEEKSLYQLIGETMSDFIILTDPNGQIMYASPSHSSLLGYLPGRGTPLSNYIREAEITWAKLKSVVQSTPRISELRMRAADGHWVWLETKVTPIKGGGAVPAQFMLVSREITERKQYEERLHKLAFYDHLTAIPNRAHFKMYMENLISQPEERKQDIALALLDCDRFKQLNDTLGHLAGDEFLQLLSRELQQTVKGSGQAFRIGGDEFAVVLHRFTSPEMLDEILDRLLQLFNKSWSINKGSSFHTSASIGVALYPQHGSSINELLRAADLAMYRSKKHGGNEANLYSELVDEDYKNQPK
>NZ_CP048429.1|WP_062524830.1|4176929_4177964_+|phenylalanine--tRNA-ligase-subunit-alpha
MKEKLEALKVEALAKLQEVTDPQVLNDLRVKYLGKKGELTEVLRGMGGLSAEERPVIGQVANLVRGAIEEIISTKQEAFQQQETLNRLNAEKVDVTLPGRSLPQGGIHPLSRVVQEIEDIFIGMGYRVAEGPEVETDYYNFEALNLPKNHPARDMQDSFYLTEDILMRTQTSPVQIRTMQAMKGETPVKIICPGKVFRRDDDDATHSFQFHQVEGLVIGRHIRMSDLKGTLQQFVQEMFGPNTSIRLRPSFFPFTEPSVEVDVSCFKCGGHGCRLCKQSGWLEILGAGMVHPNVLEMGGYDPAEYSGFAFGVGAERIAMLKYGIDDIRYFYTNDMAFVKQFKGI
>NZ_CP048429.1|WP_062524827.1|4178305_4180750_+|phenylalanine--tRNA-ligase-subunit-beta
MKVSTSWLTDYISLEGVTAAELADRITTAGIEIDGVERRNKGLSGIVVGYVKSKEKHPDADKLNVCIVDAGQGEDLQIVCGAKNVAAGQKVPVALVGAKLPGLDIKKAKLRGVLSQGMICSAKELGLNDKLLPKEIQEGILVLPENTEIGQDILKVLGLDDEILDFDLTPNRSDCLSMIGAAYEVSAILGRDLKLPDPAADLVEAGGSASDSISVKIEDEAYCAHYSVRYISGVKPGPSPLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDGDKVKGGVLGVRFAREGELLTTLDGQERKLEPQMLVIADGAKAVALAGVMGGLETEVTADTVNLVLESAKFDGGTVRKTSRQLGLRSEASLRFEKEVDPNAVIPALNRAAALIARYAGGTVHTGIVQAGTETVEEKVLTLSLEKLNRYLGTDLSLLEVKTLLTRLHFKCGDADQGLVEVQVPTRRGDISYDVDLIEEVARLYGYDNIPTTLIEGVTTPGALTSRQSQRRELRRLLADGGYQEVMGYSFIRPEQSKLFPALADGLLSVKLAMPMSEERSVLRTSLIPQLLDIARYNTNRRQSDLALFEIGNVFFTDEEQLTRQPRELPVLGLLLSGSRAAKQWNVEEQPVDFFDLKGALETVFNYLGLADSVSYEGDAPENYHPGRSASVYLQGTEGRVKLGTLGQLHPELQRELDLEDTYVAELLLQPLYSAARTNLQYTELQRFPGMERDIAVVVDSAVPAGHLLASIRENGGTLLQNVQVFDVYTGGKMESGKKSIAISLLYRHTDHTLTDEEVVEVHDKVVSALQQTFGAELRK
>NZ_CP048429.1|WP_074648268.1|4180945_4183117_+|hypothetical-protein
MAMDRTRVAVEIYGTSYKLVGSSTEYMKQVARYVDEHMRAISKSHTRLDTPRIAVLAAVHMAEQAIQVQDFKNELNMLTGERTELRVEVARLTEAQKERQEEYERLEAAAKEEAARLAAEAEEERRRHLEIQEQERKLHAEALLEAERTAAAAREQLAEELKAREAELKSLRERYEQEQAAGRESHRQELAAAEAARLQQLADLQAEHQQELEQLRETLDKEKAESLFRLEQELAETRESLGGEIVEIRSSLSKELADTKSALEKELAEEREVLQKELAKNKELRQSQGTQEHRHKQQLQEMEKQLGELRGGTGQLQSRLRAAEAGLKSEREARSTLLAQYEAVLKREEQLTEELRAAAEQGALRQEELEALRQRYEAVQQEAAGLKESLQETAENLSRVEAELHSANELGDLLSDELEELRQRHSRKQEEAAVLHQSLEETKSSLHQLEGELTQAASEAATWHELADKHMEDIGELEMKLLEAEEKSSVLQTEIDTLRGQADGMVQQLDRESGLRAEAEAESRQYRAEAEAARKELAALRGRYEELIAQYDEVLQDGEQLKERYELLEAEGEETARRLEELYEAGREAAAAAAEQQEALRETREIEASWKRKYEELLQSQQEWSETEAQLREEIEIWEQEASKAEAEAESMNREHTQVQQQLDEIGESYELVQGQLRLMQAQSEMRQGELNKLTQEHQSLQAEYAKLQREYNEWIQLIEQDS
>NZ_CP048429.1|WP_062524823.1|4183727_4184120_-|cytochrome-C-oxidase-subunit-II
MIRRFAMLLSISFLLILAACGGTGNNTGTANSKDGAAEAGITADEELIISATNYSFDQNEYHLKKGVPVNIVFKNESGNHGILVPELNLRLDGKDSSKVIVPEEAGTFEMTCAIMCGSGHSGMSAKVIVE
>NZ_CP048429.1|WP_163704371.1|4184427_4185465_+|diguanylate-cyclase
MFVLSNHVIEIRSILLPSKGHLFIGCNLMIVIAMATAEMWLRSTSQYHKQAVVVCGFAVSYLMYFVLEPFVDGAQMTLMMPIMISLVYFDRRLLNALGAFSLLFYAVIYLGLEQRLLDKPLLEFLMVECVFIVFVVMAQAVIVRAREVREHLEQLTKSEQELMVERAISDKLLKIDALTGLYNHKTFHEYLVSLLEQCESNGLRLQLALFDIDNFKRVNDTYGHWVGDLVLKEVAAKVGGLIGLNDFAARYGGEEFAVIFTDKSVHEAYAAAEEMRLKIAAMEHPYAGGKPITVSIGLCDYQLGDGKEKLFRKTDHALYAAKHSGKNAVVTASATHEDDNILSYA
>NZ_CP048429.1|WP_062524820.1|4185545_4185893_-|phage-holin-family-protein
MRFLGHVVRFIVAAIVLMVVGWIVPQFTVGGFWSALILALVIALLGWVIEGIFGKKTTPFGRGIVGFLVSALVIWIAQFIVSGVSVTVLGALLAALVIGIIDLFLPVSTPFEAGK
>NZ_CP048429.1|WP_062524818.1|4186046_4188413_+|endonuclease-MutS2
MDDKILHTLEYRKILNKLTQYTQTPMGRQQAESLKPSGDFEGVKKLLQATDEAANVDRLKGIPSFGGVTDIKMALKRASIGGLLGTSELLSVGNTIGGARRVKRFLAAMHEDENIPLLFAQSDLLSEQKHVEDAIRACIDENADVLDTASPELAAIRRELRGGETRIREKLDSMIRSSSVAKMLQDQLVTIRGDRFVIPVKAEYRAHFGGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEIILHRLTALVGDIAEEMAYDVDILGELDFIFAKARLARDMKATQPRMNDRGYLKLRKGRHPLIPAEQVVPLDVELGNQYSSIIVTGPNTGGKTVTLKTIGLLSLMSMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIISILRRMTPKSLILLDEVGAGTDPAEGSALAIAILENIHRTECRMVATTHYSELKAYAYERKGVINASMEFDVQTLSPTYRLLIGVPGRSNAFAIAERLGLPDAILEHARGEVKEEDLRVEHMIASLEENRLGAESERERAEAVRREAEEFRKRQQLELEKLESQRDKRLEKAEKDASAILDKARKEAEQIISDLRRLALEEGASVKEHKLIEARRRLDEAEPAPRKKTAARSSVKAPRKIQPGDEVKVQNVNQKGYVVELSGPKEAIVQFGIMKMKVNLEDLEFLASAPDSPPPALRRATTVKRTRDENIRSELDLRGTNLEEAIMETDRFIDEAFLGNLGQISIIHGKGTGVLRTGIQEYLRKHKHVKSYRLGNYNEGGAGVTVAELQ
>NZ_CP048429.1|WP_062524816.1|4188444_4188864_+|DUF350-domain-containing-protein
MQENIDLLLDHPLGALLGYFTVAILGLVVFLSFFEMVTKYNCWDEIRKGNVAVAMATGGKIFGICNILRFSISAGVSIYETMKWSVVGFLLLILAYFLFEFLTPVFSIDDEIAKDNRAVGLTAMMISVSLSYVIGAAIF
>NZ_CP048429.1|WP_062524814.1|4188995_4189541_+|hypothetical-protein
METTVCPWCHTEIVWDEEFGPEDTCPHCNNELSGYRTVTLGIDDLEDEDEPEEAGEPDQDSVSDDDLWDDEDKDSVVPIFNTLVQFGEDYDLKQYESKVAAILAAQLEAPECPQCHELMLLSGTQKVDGFEPSSPEELGGPVLKPPFALNLFVCPSCFHVQHSLAQEDRVQLVRNLSTKAK

Crispr_ID: NZ_CP048429_25

• CRISPR_ID: NZ_CP048429_25
• CRISPR_location: 4183446-4183519
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_25

Consensus_repeat	Method
AATTAGTGATCCTTTTTCCACTT	CRISPRCasFinder

spacers of NZ_CP048429_25

>25.1|4183469|28|NZ_CP048429|CRISPRCasFinder
AAGCTGCGGAGATCGGTGTGCTGGGGCA

CRISPR arrays and Neighbor proteins around NZ_CP048429_25

CRISPR arrays

The CRISPR arrays of NZ_CP048429_25

>merge|NZ_CP048429|25|4183446-4183519|CRISPRCasFinder
AATTAGTGATCCTTTTTCCACTTAAGCTGCGGAGATCGGTGTGCTGGGGCAAATTAGTGATCCTTTTTCCACTT

>NZ_CP048429|25|22|4183446-4183519|CRISPRCasFinder
AATTAGTGATCCTTTTTCCACTT	AAGCTGCGGAGATCGGTGTGCTGGGGCA
AATTAGTGATCCTTTTTCCACTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_074648268.1|4180945_4183117_+|hypothetical-protein	unknown	unknown	gnl|CDD|173412
NZ_CP048429.1|WP_062524816.1|4188444_4188864_+|DUF350-domain-containing-protein	unknown	unknown	gnl|CDD|226289
NZ_CP048429.1|WP_039790804.1|4168802_4169078_+|HPr-family-phosphocarrier-protein	unknown	unknown	gnl|CDD|237503
NZ_CP048429.1|WP_062524840.1|4166639_4168703_+|PTS-transporter-subunit-EIIC	unknown	unknown	gnl|CDD|273923
NZ_CP048429.1|WP_062524841.1|4165443_4166313_+|PRD-domain-containing-protein	unknown	unknown	gnl|CDD|170086
NZ_CP048429.1|WP_062524830.1|4176929_4177964_+|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|234780
NZ_CP048429.1|WP_062524810.1|4192463_4193180_+|response-regulator	unknown	unknown	gnl|CDD|226931
NZ_CP048429.1|WP_062524823.1|4183727_4184120_-|cytochrome-C-oxidase-subunit-II	unknown	unknown	gnl|CDD|224537
NZ_CP048429.1|WP_062524814.1|4188995_4189541_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_163704371.1|4184427_4185465_+|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NZ_CP048429.1|WP_062524820.1|4185545_4185893_-|phage-holin-family-protein	unknown	unknown	gnl|CDD|377198
NZ_CP048429.1|WP_062524838.1|4169070_4170783_+|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl|CDD|224006
NZ_CP048429.1|WP_062524812.1|4189619_4190834_+|MFS-transporter	unknown	unknown	gnl|CDD|369468
NZ_CP048429.1|WP_062524843.1|4163691_4165308_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524836.1|4171418_4173815_+|type-I-pullulanase	unknown	unknown	gnl|CDD|273975
NZ_CP048429.1|WP_062524818.1|4186046_4188413_+|endonuclease-MutS2	unknown	unknown	gnl|CDD|234750
NZ_CP048429.1|WP_062524834.1|4174283_4175888_-|GGDEF-domain-containing-protein	unknown	unknown	gnl|CDD|143635
NZ_CP048429.1|WP_074648270.1|4190842_4192474_+|two-component-system-sensor-histidine-kinase-DcuS	unknown	unknown	gnl|CDD|236839
NZ_CP048429.1|WP_143013448.1|4193224_4193407_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524827.1|4178305_4180750_+|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl|CDD|234804

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_074648268.1|4180945_4183117_+|hypothetical-protein	gnl|CDD|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	1.18013e-12
NZ_CP048429.1|WP_062524816.1|4188444_4188864_+|DUF350-domain-containing-protein	gnl|CDD|226289	COG3766, COG3766, Predicted membrane protein [Function unknown].	3.81019e-31
NZ_CP048429.1|WP_039790804.1|4168802_4169078_+|HPr-family-phosphocarrier-protein	gnl|CDD|237503	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional.	3.2335e-29
NZ_CP048429.1|WP_062524840.1|4166639_4168703_+|PTS-transporter-subunit-EIIC	gnl|CDD|273923	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for glucose transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, glucose-specific IIABC component" while the B. subtilus enzyme also contains an enzyme III domain which appears to act independently of the enzyme II domains. This family is most closely related to the N-acetylglucosamine-specific PTS enzymes (TIGR01998). [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP048429.1|WP_062524841.1|4165443_4166313_+|PRD-domain-containing-protein	gnl|CDD|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	5.0309e-46
NZ_CP048429.1|WP_062524830.1|4176929_4177964_+|phenylalanine--tRNA-ligase-subunit-alpha	gnl|CDD|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP048429.1|WP_062524810.1|4192463_4193180_+|response-regulator	gnl|CDD|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	9.87196e-84
NZ_CP048429.1|WP_062524823.1|4183727_4184120_-|cytochrome-C-oxidase-subunit-II	gnl|CDD|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	1.68391e-12
NZ_CP048429.1|WP_163704371.1|4184427_4185465_+|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	8.45928e-53
NZ_CP048429.1|WP_062524820.1|4185545_4185893_-|phage-holin-family-protein	gnl|CDD|377198	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV. These proteins are predicted transmembrane proteins with probably four transmembrane spans. The 1.E.40 is represented by the mycobacterial 4 phage holin, but it also contains many cyanobacterial. proteobacterial and firmicute proteins. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as in those of the bacteriophage of these organisms. The primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded the enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases.	1.13111e-11
NZ_CP048429.1|WP_062524838.1|4169070_4170783_+|phosphoenolpyruvate--protein-phosphotransferase	gnl|CDD|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP048429.1|WP_062524812.1|4189619_4190834_+|MFS-transporter	gnl|CDD|369468	pfam07690, MFS_1, Major Facilitator Superfamily.	7.46737e-09
NZ_CP048429.1|WP_062524836.1|4171418_4173815_+|type-I-pullulanase	gnl|CDD|273975	TIGR02104, pulA_typeI, pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.	0
NZ_CP048429.1|WP_062524818.1|4186046_4188413_+|endonuclease-MutS2	gnl|CDD|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_CP048429.1|WP_062524834.1|4174283_4175888_-|GGDEF-domain-containing-protein	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.15091e-52
NZ_CP048429.1|WP_074648270.1|4190842_4192474_+|two-component-system-sensor-histidine-kinase-DcuS	gnl|CDD|236839	PRK11086, PRK11086, sensory histidine kinase DcuS; Provisional.	0
NZ_CP048429.1|WP_062524827.1|4178305_4180750_+|phenylalanine--tRNA-ligase-subunit-beta	gnl|CDD|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0

Protein sequences

>NZ_CP048429.1|WP_074648268.1|4180945_4183117_+|hypothetical-protein
MAMDRTRVAVEIYGTSYKLVGSSTEYMKQVARYVDEHMRAISKSHTRLDTPRIAVLAAVHMAEQAIQVQDFKNELNMLTGERTELRVEVARLTEAQKERQEEYERLEAAAKEEAARLAAEAEEERRRHLEIQEQERKLHAEALLEAERTAAAAREQLAEELKAREAELKSLRERYEQEQAAGRESHRQELAAAEAARLQQLADLQAEHQQELEQLRETLDKEKAESLFRLEQELAETRESLGGEIVEIRSSLSKELADTKSALEKELAEEREVLQKELAKNKELRQSQGTQEHRHKQQLQEMEKQLGELRGGTGQLQSRLRAAEAGLKSEREARSTLLAQYEAVLKREEQLTEELRAAAEQGALRQEELEALRQRYEAVQQEAAGLKESLQETAENLSRVEAELHSANELGDLLSDELEELRQRHSRKQEEAAVLHQSLEETKSSLHQLEGELTQAASEAATWHELADKHMEDIGELEMKLLEAEEKSSVLQTEIDTLRGQADGMVQQLDRESGLRAEAEAESRQYRAEAEAARKELAALRGRYEELIAQYDEVLQDGEQLKERYELLEAEGEETARRLEELYEAGREAAAAAAEQQEALRETREIEASWKRKYEELLQSQQEWSETEAQLREEIEIWEQEASKAEAEAESMNREHTQVQQQLDEIGESYELVQGQLRLMQAQSEMRQGELNKLTQEHQSLQAEYAKLQREYNEWIQLIEQDS
>NZ_CP048429.1|WP_062524827.1|4178305_4180750_+|phenylalanine--tRNA-ligase-subunit-beta
MKVSTSWLTDYISLEGVTAAELADRITTAGIEIDGVERRNKGLSGIVVGYVKSKEKHPDADKLNVCIVDAGQGEDLQIVCGAKNVAAGQKVPVALVGAKLPGLDIKKAKLRGVLSQGMICSAKELGLNDKLLPKEIQEGILVLPENTEIGQDILKVLGLDDEILDFDLTPNRSDCLSMIGAAYEVSAILGRDLKLPDPAADLVEAGGSASDSISVKIEDEAYCAHYSVRYISGVKPGPSPLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDGDKVKGGVLGVRFAREGELLTTLDGQERKLEPQMLVIADGAKAVALAGVMGGLETEVTADTVNLVLESAKFDGGTVRKTSRQLGLRSEASLRFEKEVDPNAVIPALNRAAALIARYAGGTVHTGIVQAGTETVEEKVLTLSLEKLNRYLGTDLSLLEVKTLLTRLHFKCGDADQGLVEVQVPTRRGDISYDVDLIEEVARLYGYDNIPTTLIEGVTTPGALTSRQSQRRELRRLLADGGYQEVMGYSFIRPEQSKLFPALADGLLSVKLAMPMSEERSVLRTSLIPQLLDIARYNTNRRQSDLALFEIGNVFFTDEEQLTRQPRELPVLGLLLSGSRAAKQWNVEEQPVDFFDLKGALETVFNYLGLADSVSYEGDAPENYHPGRSASVYLQGTEGRVKLGTLGQLHPELQRELDLEDTYVAELLLQPLYSAARTNLQYTELQRFPGMERDIAVVVDSAVPAGHLLASIRENGGTLLQNVQVFDVYTGGKMESGKKSIAISLLYRHTDHTLTDEEVVEVHDKVVSALQQTFGAELRK
>NZ_CP048429.1|WP_062524830.1|4176929_4177964_+|phenylalanine--tRNA-ligase-subunit-alpha
MKEKLEALKVEALAKLQEVTDPQVLNDLRVKYLGKKGELTEVLRGMGGLSAEERPVIGQVANLVRGAIEEIISTKQEAFQQQETLNRLNAEKVDVTLPGRSLPQGGIHPLSRVVQEIEDIFIGMGYRVAEGPEVETDYYNFEALNLPKNHPARDMQDSFYLTEDILMRTQTSPVQIRTMQAMKGETPVKIICPGKVFRRDDDDATHSFQFHQVEGLVIGRHIRMSDLKGTLQQFVQEMFGPNTSIRLRPSFFPFTEPSVEVDVSCFKCGGHGCRLCKQSGWLEILGAGMVHPNVLEMGGYDPAEYSGFAFGVGAERIAMLKYGIDDIRYFYTNDMAFVKQFKGI
>NZ_CP048429.1|WP_062524834.1|4174283_4175888_-|GGDEF-domain-containing-protein
MAGFPEIKNTRRLILLFTAISVLLVGISVASLLYLNHTMNKLSGSLYSGVYQNSQLILNADRDLYQASLAFHTAMNGNLTTGEHSRLSQDFQENNAQAEQRLRMASDNINSVKNPFSGMKQSELLLSKLREVLDSIDAPFQIWKDTGTKLMAERVRSGWNAESYSALEANVLLKNVREPLDNCEQLIDDYALQVTQEFRDQKSSLFALYSLFLFLLVLVIIYLCRKLIDLQNEMLEEKSLYQLIGETMSDFIILTDPNGQIMYASPSHSSLLGYLPGRGTPLSNYIREAEITWAKLKSVVQSTPRISELRMRAADGHWVWLETKVTPIKGGGAVPAQFMLVSREITERKQYEERLHKLAFYDHLTAIPNRAHFKMYMENLISQPEERKQDIALALLDCDRFKQLNDTLGHLAGDEFLQLLSRELQQTVKGSGQAFRIGGDEFAVVLHRFTSPEMLDEILDRLLQLFNKSWSINKGSSFHTSASIGVALYPQHGSSINELLRAADLAMYRSKKHGGNEANLYSELVDEDYKNQPK
>NZ_CP048429.1|WP_062524836.1|4171418_4173815_+|type-I-pullulanase
MNSNYINTEKEIETYTGKDLGLTYTAGYSLFKVWVPTAFTVSLVLYQTDGNNIESAVSGDRDSGRIVNMQRQEGGIWQARLHEDLKGMYYMYRAVFEDGTLNEAADPYAKAVSANGVRSAIVDLQDTDPEGWDRDVSPALPHPADAVIYELHVRDFSSAADSGMRYKGKFKAFTEFGLTNSAGQAIGVDHLAELGITHVHLMPVADFQTVNELGMNSERSAEPFFTEYNWGYDPQHYNVPEGSYSTNPSDPGTRIREMKEMVQALHSKGISVIMDVVYNHTYSVEKGPFQPLVPDYFYRHDYTGRLSNGSGVGNELATERPMVRKYIKDSLAYWASEYHIDGFRFDLMGLMDSVTMREIAEELRLEANSDLLLYGEPWTGGDSPLATKTLKGVQKGKGYAVFNDNFRSAVKGDSDGWGKGFATGEYGKEGAVASGIKGAIHEFTDSPVEAVNYVTAHDNLNLWDKMLATQGLRQAARLPELENGRLKYGGSVEAAVAAADPYIGIDPDDILGNETVRRTLLANGIILTSQGIPFLQAGDELLRSKYGDHNSYRSPDAVNAIRWENKGKFLPVFEYYKGLIALRRGHPAFRLHGRQEIERSLEFLRCDSGVVAYLLKNNAGGDAWNNIVVIFNANPGPVSQRLPDTDGCWNIVVDHTAARADAFRSIQDPEVEIEGLSMMVLYDKYGQPEPRSKMIEIRYERPDGDYRGWNLWVWGTGIQDGQHDFRQMENGYAVARIEVLPETSSVGYILRLNDWEEKDGAGDRFIDCSGSKDLVQVTVREREQENSGDKNDPLPMTS
>NZ_CP048429.1|WP_062524838.1|4169070_4170783_+|phosphoenolpyruvate--protein-phosphotransferase
MSKISGIAASAGIAVARAFILEHPDYTITKTAAADVEAEIAKLTDALEKSKAELQSIKERTLAELGEKKAEIFESHLLILDDPELISPVMDKIREEMVNADYALNEVATQFIEMFENMKSAYLQERAADMRDVTKRVLNHLLGIHYVSPAEISEEVIVIAQDLTPSDTAQLNRNFVKGFTTNIGGRTSHSAIMARSLEIPAVVGTKNVLSEVKAGDLVIVDGLSGDVLINPSDAEVAEYKAKQAAYDLQIAEWKKLRDEPTVSADGKHVELAANIGTPNDVNGVIDNGGEGVGLYRTEFLYMGRDKLPSEEIQYNAYRTVLENMKGKPVVVRTLDIGGDKELPYLDLPKEMNPFLGFRAIRLCLDRQDIFRTQLRALLRASAHGDLRIMFPMIATLGEFRAARDLLLEEKAKLREEGKEVSDSIQLGIMVEIPSTAVLADQFAKEVDFFSIGTNDLIQYTMAADRMNERVSYLYQPYNPAILRLVKTVIDAAHAEGKWAGMCGEMAGDSTAIPLLLGLGLDEFSMSATSILPARSQISKLSAAEMKDMAAKALQLSTAEEVAALVQSSVK
>NZ_CP048429.1|WP_039790804.1|4168802_4169078_+|HPr-family-phosphocarrier-protein
MQKTFRIIDEDGIHARPATALVNTATKFKGTESFAEAKGKKVTLKSILGVLSLGLEAGDTLTLITEGSEEAEALSALQEVMVKEGLGELHE
>NZ_CP048429.1|WP_062524840.1|4166639_4168703_+|PTS-transporter-subunit-EIIC
MFKKLFGVLQRVGKALMLPVAILPAAGLLLGIGNMLVNPDFLQYVPALENDVVQAIATVLMNSGQIVFDNLSLLFAVGVAIGLAGGEGVAGLAAIIGFLVMNVTMGTVVGVNAYVLSWKDFAYSSVLGIPTLQTGVFGGILVGILASAMYKRFFRIELPSYLGFFAGKRFVPIMTAVTSLLLGLLLTLIWPPIQHGLNYVSQSMINTNLTLSAFIFGVIERSLIPFGLHHIFYSPFWYEFGSYVDKAGELIRGDQRIFMQQLRDGVEFTAGTFTTGKYPFMMFGLPAAALAIYHEARPENKRVVGSLMISAALTSFLTGITEPLEFSFLFVAPLLFAVHAVFAGLSFMTMHILNVKIGMTFSGGFIDYMLFGVIPNRTAWWLVIPVGLVLAVIYYFGFRFVIRKFNLRTPGREDPSDDIEETNTENVSRSGDDLPRNILSALGGKENITHLDACITRLRVEVKDKAGVDKNRLKKLGASGVLEVGNNVQAIFGTRSDTIKSQIQDVMDGRTPAASPAAAAPQPELEKQAGEEGAAIIPEDIVSPVNGELLDITQVPDAVFSQKMTGDGFAFLSDDGKIASPVYGKVFNVFPSKHAVGIMSDGGKEVLVHIGVNTVKLKGKGFTVLVEEGDLVAAGQPIMEVDLEYVKANAPSVISPVIFSNLPEGSAVTLKKPGKVVIGDKDIISIV
>NZ_CP048429.1|WP_062524841.1|4165443_4166313_+|PRD-domain-containing-protein
MSSITVAKVLNNNVIIAQHPQYAEVVVIGKGIGFNRKVRDLINLSSVEKMFILRNQEEQEQYKQLVPQVDEKLIEVMQEIVLHILQSSRQPLNEHIHIALTDHISFAIRRNEQNIAIHNPFLYETKEIYPEEYSLAEYAVGRINEAMGVRLPPDEIGFVALHIVSALSNRHISEVKEHSLLIGDLVNLVEDHLEYRIPRDSLDYSRLVTHLRFVLERLRRGETVRETSSLDGLMKREYPEMYMLAWKLTKVIEKRVRIPVYAAEVSYLTIHLQRLAQKKEDEADMQQPD
>NZ_CP048429.1|WP_062524843.1|4163691_4165308_+|hypothetical-protein
MISTLNTIMKIRGASGANRLLYYFGRLPLIGKLMNDSVYSKTSLKKTFTIVVLILKIIWGFLTKFAYLGLVVYLPIQLAVKELQLADQYDLYLYVLVLLSFGVGTVSNAIILEPKRDKYICVKLMRLPADKYMHAVLALRALTFFIYFVPAMLVFAEAYGAPLWQGLLLSLLLSLWRIAGEALHLWIFDRQGIVLVKKNGFVWIVIGAGYLLAFVPLYMGNSLLDMDSVLFSLPLSLALVVLGAVSALYIARYAGYRNAVDAVTKIDDPLLDMGRMMKEANMKQVETKVKDFSAEKLRPGQFAGKSGFAYLNAIFFSRHKRFLIQPIQRRLVIIGALSAAGLLATYASPDTFSKLARYLISSLPVLVIAMNFTSIGERVCKAMFFNCDLSLLRYGFYRERSAILSNFRTRLLRISGLNLIPAAAISVAVNLLLFLSGERWGVGEALSVSGAVLGLSLFFSVHHLFMYYIFQPYSTELNVKNPFFSIVNSIVLAVGVVCMQFQSTPARFAIVVVLAAAAYMLIALFLVYRYSDRTFRVK
>NZ_CP048429.1|WP_062524823.1|4183727_4184120_-|cytochrome-C-oxidase-subunit-II
MIRRFAMLLSISFLLILAACGGTGNNTGTANSKDGAAEAGITADEELIISATNYSFDQNEYHLKKGVPVNIVFKNESGNHGILVPELNLRLDGKDSSKVIVPEEAGTFEMTCAIMCGSGHSGMSAKVIVE
>NZ_CP048429.1|WP_163704371.1|4184427_4185465_+|diguanylate-cyclase
MFVLSNHVIEIRSILLPSKGHLFIGCNLMIVIAMATAEMWLRSTSQYHKQAVVVCGFAVSYLMYFVLEPFVDGAQMTLMMPIMISLVYFDRRLLNALGAFSLLFYAVIYLGLEQRLLDKPLLEFLMVECVFIVFVVMAQAVIVRAREVREHLEQLTKSEQELMVERAISDKLLKIDALTGLYNHKTFHEYLVSLLEQCESNGLRLQLALFDIDNFKRVNDTYGHWVGDLVLKEVAAKVGGLIGLNDFAARYGGEEFAVIFTDKSVHEAYAAAEEMRLKIAAMEHPYAGGKPITVSIGLCDYQLGDGKEKLFRKTDHALYAAKHSGKNAVVTASATHEDDNILSYA
>NZ_CP048429.1|WP_062524820.1|4185545_4185893_-|phage-holin-family-protein
MRFLGHVVRFIVAAIVLMVVGWIVPQFTVGGFWSALILALVIALLGWVIEGIFGKKTTPFGRGIVGFLVSALVIWIAQFIVSGVSVTVLGALLAALVIGIIDLFLPVSTPFEAGK
>NZ_CP048429.1|WP_062524818.1|4186046_4188413_+|endonuclease-MutS2
MDDKILHTLEYRKILNKLTQYTQTPMGRQQAESLKPSGDFEGVKKLLQATDEAANVDRLKGIPSFGGVTDIKMALKRASIGGLLGTSELLSVGNTIGGARRVKRFLAAMHEDENIPLLFAQSDLLSEQKHVEDAIRACIDENADVLDTASPELAAIRRELRGGETRIREKLDSMIRSSSVAKMLQDQLVTIRGDRFVIPVKAEYRAHFGGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEIILHRLTALVGDIAEEMAYDVDILGELDFIFAKARLARDMKATQPRMNDRGYLKLRKGRHPLIPAEQVVPLDVELGNQYSSIIVTGPNTGGKTVTLKTIGLLSLMSMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIISILRRMTPKSLILLDEVGAGTDPAEGSALAIAILENIHRTECRMVATTHYSELKAYAYERKGVINASMEFDVQTLSPTYRLLIGVPGRSNAFAIAERLGLPDAILEHARGEVKEEDLRVEHMIASLEENRLGAESERERAEAVRREAEEFRKRQQLELEKLESQRDKRLEKAEKDASAILDKARKEAEQIISDLRRLALEEGASVKEHKLIEARRRLDEAEPAPRKKTAARSSVKAPRKIQPGDEVKVQNVNQKGYVVELSGPKEAIVQFGIMKMKVNLEDLEFLASAPDSPPPALRRATTVKRTRDENIRSELDLRGTNLEEAIMETDRFIDEAFLGNLGQISIIHGKGTGVLRTGIQEYLRKHKHVKSYRLGNYNEGGAGVTVAELQ
>NZ_CP048429.1|WP_062524816.1|4188444_4188864_+|DUF350-domain-containing-protein
MQENIDLLLDHPLGALLGYFTVAILGLVVFLSFFEMVTKYNCWDEIRKGNVAVAMATGGKIFGICNILRFSISAGVSIYETMKWSVVGFLLLILAYFLFEFLTPVFSIDDEIAKDNRAVGLTAMMISVSLSYVIGAAIF
>NZ_CP048429.1|WP_062524814.1|4188995_4189541_+|hypothetical-protein
METTVCPWCHTEIVWDEEFGPEDTCPHCNNELSGYRTVTLGIDDLEDEDEPEEAGEPDQDSVSDDDLWDDEDKDSVVPIFNTLVQFGEDYDLKQYESKVAAILAAQLEAPECPQCHELMLLSGTQKVDGFEPSSPEELGGPVLKPPFALNLFVCPSCFHVQHSLAQEDRVQLVRNLSTKAK
>NZ_CP048429.1|WP_062524812.1|4189619_4190834_+|MFS-transporter
MKDSAHKQEVLLLAVNGLCSLASVLAGTFLNVYLWKNQQNFAMIGWFTVAQQIAVGLSFWLAGKWVKEHNKMNALRLGLAVSGLFYLLVLWLGNRAVHYIWPLGLVLGIAIGLFWLAYNIVYFEITDAGNRDFFNGWMGLLGSFTGILGPWVSGWIISALHGERGYRLVFLLSLSIYGIAVVLSFFLKKRKSEGAYLWMEPWRELHRKGSAWRPAAAALVFQGLREGVFSFLIGLLVYIAAKQESKLGQFALITSAVALISYWAAGKWFTPKLRSGGMLVGGILLVAVITPLLWSVSYGTLLIMGIGTSLFLPLYMLPMTSSVFDLMGESKESAGKRVELVVLRELCLMSGRMLGVFVFIAVLSVNDSPRVITWLMLLLGAAPLGSWVTLHHLLKRKADASLSQ
>NZ_CP048429.1|WP_074648270.1|4190842_4192474_+|two-component-system-sensor-histidine-kinase-DcuS
MNRGKSVLVKTKDYGLRTKVTLMVSAVVMLVMVVLYIVFRNQIIPQTRHALEDKATAIARTIALIPLVSEGLNEGRSKEIQAYTSKITRRNDIMFVVVIDMHSIRYSHPDPSRIGKSFVGGGQKAALHGEESISEGEGLLGKSLRAFVPVYNNRGAQVGVVVVGLSMERVHRLIRQNEWTIIAILLSGAVLGAAGAMVLARKIKQMMFGMEPSDISKLLQERSAMLQSTREGIIAVDHAARISMINREAERLLGTAGITGNGMTRHIADYWPELRLEQVLSSGESRQDQELELNGITLLVSSVPIQVNGMIAGAIATFRDKTELAVLAERLSGISVYADALRAGAHEYMNKLHVIMGMTHMGLYDELQQYISGTVSNYQNEIGSITRQIKDPVMAGFLLGKLSRAREAGTDLQLAEDSYLPESADPQVIHQLITIVGNLLDNAMEVLEGQRMKEIGLSFQYERGRLICTVRDNGPGIPEPLREQIFVQGFSTKGERRGMGLYLVRKSVEKLQGQLQIIPGPEPGTTFMADVPYAVKGDETNDH
>NZ_CP048429.1|WP_062524810.1|4192463_4193180_+|response-regulator
MTIKVLIVEDDPMVAKFNRHYVEQVQGFEFAGWAASVDEARKLLAELKVDLILLDIYMPRTSGLQLLSSLREQGSVVDIIVISAASDNASIRKALQLGAVDYLIKPFEFARFQAALSAYREDYMLMKHREHLSQEQLDKLLRHSIGMEEEKSGTLPKGLTEGTLESIWSTIQKLENPVFSTEEITAEAPISRISVRKYLAFLTEAGVLEMEVSYGAVGRPVYMYTVTASGHEIIATYI
>NZ_CP048429.1|WP_143013448.1|4193224_4193407_+|hypothetical-protein
MKIWLAEMPTGGGTVLLRRLMLSLQNDGEGVPKKGVVAIVKDGKIQSMMPSDPKSFGKLE

Crispr_ID: NZ_CP048429_26

• CRISPR_ID: NZ_CP048429_26
• CRISPR_location: 4237756-4237895
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_26

Consensus_repeat	Method
CTTCAGGAAACAGGCGGGCAAGATGCACAGGAACCTCCGGGTGTACTGCCAGC	CRISPRCasFinder

spacers of NZ_CP048429_26

>26.1|4237809|34|NZ_CP048429|CRISPRCasFinder
CGCCGCACATTATCCTGCGGCAGCTGCTAAGATC

CRISPR arrays and Neighbor proteins around NZ_CP048429_26

CRISPR arrays

The CRISPR arrays of NZ_CP048429_26

>merge|NZ_CP048429|26|4237756-4237895|CRISPRCasFinder
CTTCAGGAAACAGGCGGGCAAGATGCACAGGAACCTCCGGGTGTACTGCCAGCCGCCGCACATTATCCTGCGGCAGCTGCTAAGATCCTTCAGGAAACAGGCGGGCAAGATGCACAGGAACCTCCGGGTGTACTGCCAGC

>NZ_CP048429|26|23|4237756-4237895|CRISPRCasFinder
CTTCAGGAAACAGGCGGGCAAGATGCACAGGAACCTCCGGGTGTACTGCCAGC	CGCCGCACATTATCCTGCGGCAGCTGCTAAGATC
CTTCAGGAAACAGGCGGGCAAGATGCACAGGAACCTCCGGGTGTACTGCCAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062524735.1|4244392_4245322_+|homoserine-O-succinyltransferase	unknown	unknown	gnl|CDD|235433
NZ_CP048429.1|WP_062524742.1|4239200_4240082_+|ROK-family-protein	unknown	unknown	gnl|CDD|366120
NZ_CP048429.1|WP_062524728.1|4248169_4252552_+|bifunctional-2',3'-cyclic-nucleotide-2'-phosphodiesterase/3'-nucleotidase	unknown	unknown	gnl|CDD|236505
NZ_CP048429.1|WP_062524738.1|4241787_4242732_+|1-phosphofructokinase-family-hexose-kinase	unknown	unknown	gnl|CDD|238570
NZ_CP048429.1|WP_062524733.1|4245361_4246561_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|181320
NZ_CP048429.1|WP_062524751.1|4230655_4231330_+|precorrin-8X-methylmutase	unknown	unknown	gnl|CDD|376825
NZ_CP048429.1|WP_062524758.1|4225107_4225896_+|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl|CDD|274139
NZ_CP048429.1|WP_082722726.1|4234259_4235036_+|precorrin-2-C(20)-methyltransferase	unknown	unknown	gnl|CDD|381172
NZ_CP048429.1|WP_062524753.1|4229866_4230646_+|precorrin-6A-reductase	unknown	unknown	gnl|CDD|376826
NZ_CP048429.1|WP_062524875.1|4225967_4226846_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192
NZ_CP048429.1|WP_062524745.1|4235828_4236944_+|cobalamin-biosynthesis-protein-CbiG	unknown	unknown	gnl|CDD|235610
NZ_CP048429.1|WP_062524724.1|4252998_4253841_+|SPFH-domain-containing-protein	unknown	unknown	gnl|CDD|259800
NZ_CP048429.1|WP_062524747.1|4235032_4235836_+|precorrin-4-C(11)-methyltransferase	unknown	unknown	gnl|CDD|381168
NZ_CP048429.1|WP_082722721.1|4231376_4232666_+|cobalt-precorrin-5B-(C(1))-methyltransferase	unknown	unknown	gnl|CDD|234615
NZ_CP048429.1|WP_062524726.1|4252653_4252836_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524740.1|4240438_4241458_+|HRDC-domain-containing-protein	unknown	unknown	gnl|CDD|366173
NZ_CP048429.1|WP_082722727.1|4229000_4229861_+|hypothetical-protein	unknown	unknown	gnl|CDD|239507
NZ_CP048429.1|WP_062524731.1|4246749_4247886_+|dehypoxanthine-futalosine-cyclase	unknown	unknown	gnl|CDD|274731
NZ_CP048429.1|WP_062524749.1|4232658_4233888_+|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase	unknown	unknown	gnl|CDD|381171
NZ_CP048429.1|WP_062524736.1|4242802_4243738_-|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl|CDD|213356

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062524735.1|4244392_4245322_+|homoserine-O-succinyltransferase	gnl|CDD|235433	PRK05368, PRK05368, homoserine O-succinyltransferase; Provisional.	0
NZ_CP048429.1|WP_062524742.1|4239200_4240082_+|ROK-family-protein	gnl|CDD|366120	pfam00480, ROK, ROK family.	2.40345e-76
NZ_CP048429.1|WP_062524728.1|4248169_4252552_+|bifunctional-2',3'-cyclic-nucleotide-2'-phosphodiesterase/3'-nucleotidase	gnl|CDD|236505	PRK09419, PRK09419, multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase.	0
NZ_CP048429.1|WP_062524738.1|4241787_4242732_+|1-phosphofructokinase-family-hexose-kinase	gnl|CDD|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	4.56589e-111
NZ_CP048429.1|WP_062524733.1|4245361_4246561_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|181320	PRK08247, PRK08247, methionine biosynthesis PLP-dependent protein.	0
NZ_CP048429.1|WP_062524751.1|4230655_4231330_+|precorrin-8X-methylmutase	gnl|CDD|376825	pfam02570, CbiC, Precorrin-8X methylmutase. This is a family Precorrin-8X methylmutases also known as Precorrin isomerase, CbiC/CobH, EC:5.4.1.2. This enzyme catalyzes the reaction: Precorrin-8X <=> hydrogenobyrinate. This enzyme is part of the Cobalamin (vitamin B12) biosynthetic pathway and catalyzes a methyl rearrangement.	1.01143e-98
NZ_CP048429.1|WP_062524758.1|4225107_4225896_+|cobalt-ECF-transporter-T-component-CbiQ	gnl|CDD|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	1.45479e-27
NZ_CP048429.1|WP_082722726.1|4234259_4235036_+|precorrin-2-C(20)-methyltransferase	gnl|CDD|381172	cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL. Precorrin-2 C20-methyltransferase (also known as S-adenosyl-L-methionine--precorrin-2 methyltransferase) participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. Precorrin-2 C20-methyltransferase catalyzes methylation at the C-20 position of a cyclic tetrapyrrole ring of precorrin-2 using S-adenosylmethionine as a methyl group source to produce precorrin-3A. In the anaerobic pathway, cobalt is inserted into precorrin-2 by CbiK to generate cobalt-precorrin-2, which is the substrate for CbiL, a C20 methyltransferase. In Clostridium difficile, CbiK and CbiL are fused into a bifunctional enzyme. In the aerobic pathway, the precorrin-2 C20-methyltransferase is named CobI. This family includes CbiL and CobI precorrin-2 C20-methyltransferases, both as stand-alone enzymes and when CbiL forms part of a bifunctional enzyme.	6.92722e-97
NZ_CP048429.1|WP_062524753.1|4229866_4230646_+|precorrin-6A-reductase	gnl|CDD|376826	pfam02571, CbiJ, Precorrin-6x reductase CbiJ/CobK. This family consists of Precorrin-6x reductase EC:1.3.1.54. This enzyme catalyzes the reaction: precorrin-6Y + NADP(+) <=> precorrin-6X + NADPH. CbiJ and CobK both catalyze the reduction of macocycle in the colbalmin biosynthesis pathway.	7.35081e-96
NZ_CP048429.1|WP_062524875.1|4225967_4226846_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.70154e-90
NZ_CP048429.1|WP_062524745.1|4235828_4236944_+|cobalamin-biosynthesis-protein-CbiG	gnl|CDD|235610	PRK05788, PRK05788, cobalt-precorrin 5A hydrolase.	9.92175e-81
NZ_CP048429.1|WP_062524724.1|4252998_4253841_+|SPFH-domain-containing-protein	gnl|CDD|259800	cd03402, SPFH_like_u2, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease, and in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	5.27165e-129
NZ_CP048429.1|WP_062524747.1|4235032_4235836_+|precorrin-4-C(11)-methyltransferase	gnl|CDD|381168	cd11641, Precorrin-4_C11-MT, Precorrin-4 C11-methyltransferase (CbiF/CobM). Precorrin-4 C11-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. In the aerobic pathway, CobM catalyzes the methylation of precorrin-4 at C-11 to yield precorrin-5. In the anaerobic pathway, CibF catalyzes the methylation of cobalt-precorrin-4 to cobalt-precorrin-5. Both CibF and CobM, which are homologous, are included in this model. There are about 30 enzymes involved in vitamin B12 synthetic pathway. The enzymes involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Most of the enzymes are shared in both pathways and several of these enzymes are pathway-specific.	3.53027e-129
NZ_CP048429.1|WP_082722721.1|4231376_4232666_+|cobalt-precorrin-5B-(C(1))-methyltransferase	gnl|CDD|234615	PRK00075, cbiD, cobalt-precorrin-6A synthase; Reviewed.	2.55018e-157
NZ_CP048429.1|WP_062524740.1|4240438_4241458_+|HRDC-domain-containing-protein	gnl|CDD|366173	pfam00570, HRDC, HRDC domain. The HRDC (Helicase and RNase D C-terminal) domain has a putative role in nucleic acid binding. Mutations in the HRDC domain cause human disease. It is interesting to note that the RecQ helicase in Deinococcus radiodurans has three tandem HRDC domains.	1.58746e-16
NZ_CP048429.1|WP_082722727.1|4229000_4229861_+|hypothetical-protein	gnl|CDD|239507	cd03414, CbiX_SirB_C, Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.	4.54038e-49
NZ_CP048429.1|WP_062524731.1|4246749_4247886_+|dehypoxanthine-futalosine-cyclase	gnl|CDD|274731	TIGR03699, menaquin_MqnC, dehypoxanthine futalosine cyclase. members of this protein family are involved in menaquinone biosynthesis by an alternate pathway via futalosine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_CP048429.1|WP_062524749.1|4232658_4233888_+|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase	gnl|CDD|381171	cd11644, Precorrin-6Y-MT, Precorrin-6Y methyltransferase (also named CbiE). CbiE (precorrin-6Y methyltransferase, also known as cobalt-precorrin-7 C(5)-methyltransferase, also known as cobalt-precorrin-6Y C(5)-methyltransferase) catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. It participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. CbiE functions in the anaerobic pathway, it is a subunit of precorrin-6Y C5,15-methyltransferase, a bifunctional enzyme: cobalt-precorrin-7 C(5)-methyltransferase (CbiE)/cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) (CbiT), that catalyzes two methylations (at C-5 and C-15) in precorrin-6Y, as well as the decarboxylation of the acetate side chain located in ring C, in order to generate precorrin-8X. CbiE and CbiT can be found fused (CbiET, also called CobL), or on separate protein chains (CbiE and CbiT). In the aerobic pathway, a single enzyme called CobL catalyzes the methylations at C-5 and C-15, and the decarboxylation of the C-12 acetate side chain of precorrin-6B.	1.23982e-73
NZ_CP048429.1|WP_062524736.1|4242802_4243738_-|magnesium/cobalt-transporter-CorA	gnl|CDD|213356	cd12822, TmCorA-like, Thermotoga maritima CorA-like family. This family belongs to the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the Thermotoga maritima CorA_like family are found in all three kingdoms of life. It is a functionally diverse family, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.13228e-109

Protein sequences

>NZ_CP048429.1|WP_062524745.1|4235828_4236944_+|cobalamin-biosynthesis-protein-CbiG
MAKRYAAVAITVNGIRLALKLGERLGDTEVFCCAKYYGNVQQAAGHGQVFAEPVRELLPKLFRQYEGLILFFSLGAAVRLIAPLLADKRTDPAVIVIDERGEHVISMLSGHLGGANRLTRQVAQLLDSHPVITTASDVQGTFAVDLLGSEFGWRAESFAAMKTVSAALVNGEAVAFLQESGERGWLPPGAVLPEHVRLCGSMAELLEAPFSAAVVVTDRQLPVPETAVLGERTVVYHPRSLVIGLGCNRGTPQEELEAVVLGTLAELGLSLLSVRNVATAAIKGDEAGLLALCAKYGWELALFSPEQLNTVVLERPSEIVFKATGAYGVCEPAALLSSGARDLVLKKKKSGNATIAVARVSFAETEGNQNE
>NZ_CP048429.1|WP_062524747.1|4235032_4235836_+|precorrin-4-C(11)-methyltransferase
MTAAGLEPKVYIVGAGPGDPELITVKGSRILRSADVVLYADSLVSGELIASVRPEAEVLQSSGMDLEQQVEIMTAAVKAGKSVARIHTGDPSMYGAILEQMSLLKLCGVSYEIVPGVSSVFASAAALGAELTVPELTQTVILTRAEGRTPVPEREQLRQLAAHHCTVALFLSASLAEHAAAEFLAAGWSPDTPIAVVKRATWPDQQILRTTVARLAADLREAGITMHAMILAGWALDPALTDRDQHRSKLYDKTFTHGCREGIEADG
>NZ_CP048429.1|WP_082722726.1|4234259_4235036_+|precorrin-2-C(20)-methyltransferase
MQTAVEAYHADDEYPLVETELAPIGTGTLYGVGVGPGDPELITLKACRLLRECPVIAYPATKKGGKSYAHEIVEMHIKADEKVMLGLVFPMTKDPGLLVSGWNRTAELCWNELKQGRDVAFVTEGDPNLYSTFIHLARLMQELHPGVPVVSIPGISSVLGAAAALGQPLADGDQRVGIIPATEDREALKEALLHHDTVVFLKVAKVLDLLLDVLDELGLAGKASVVTKVTSPNETVWRDARDLRGQELEYLSLMVVSK
>NZ_CP048429.1|WP_062524749.1|4232658_4233888_+|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase
MADIIYIIGIGEDGAGGLTPDSLSKVQRSEVLLGGERQLSFFGGYQGEKIVLKNGLKAFADKLEEVWKERRAVVLASGDPLFFGIAGYLVRRFGPEHVEVIPHYSSVQLAFARLGDSWQDAELVSLHGRPIRGLAQRIDGKHKIALLTDETNTPAVIGAYLREFGMTEYEAFVCERLGGGEEVCRFWELDELEKGTFAPLNVVILRWKPGSGTAALRRGFAYPDEAFHQRRPEKGLITKREVRALVLSELNLFEEAVVWDIGSGSGAVAAECARIARCGKVYALEKNAENLPNMEANRREFRADFEIIHDKAPQGLERLPDPDAVFIGGSGGELQHIIAHCAQRLRPEGRIVIGAITIETLYTGLEALKLAGMATGVTQLQASRGKPILGMTRFEGMNPVYVVSGYRQD
>NZ_CP048429.1|WP_082722721.1|4231376_4232666_+|cobalt-precorrin-5B-(C(1))-methyltransferase
MVMEHRESQDVQDHKRSGDLQLGHKGQAVGEQQGSRAATELQGSQAVPEPRENQGVPEPRGSQPAASGPAAPLRRGYTTGACAAAAAKGAALLLVTGEAPPSVEIDLPAGFRHTFKLTGGQRSSRETAVCATVKDAGDDPDATHQARIEAAVSWRDGPGVEIDGGKGVGRVTKPGLPVAIGEAAINPVPRRMILEAVSEVLEEHGAARGMRVVISVPEGEAIALKTLNPRLGILGGISILGTRGVVTPFSTEAYKASVVQAISVAAAMGNKQIILTTGGSSEKYAMAMFAELPEEASIQMGEYVGFSLEHAKAFGVRKITLVGMAGKFSKVAQGAMLIHSKNAPVDFSFLAKTAAESGADNELVEEIAAANTASQVVDLMTAAGNSAFFEQLCLHACRHCLKHMNGGLTVEMVLITMKGRVLGRAEIRG
>NZ_CP048429.1|WP_062524751.1|4230655_4231330_+|precorrin-8X-methylmutase
MEFGTDFKPLTVQPQEIESLSFQMITRELGEHEFSALQYPVVQRIIHASADFELGRSLVFHPRAMEAGISAILEGQPIIADVRMVEAGIAKERIHKYGGEVRVHISDPDVIEAAKAQGTTRAILATRKACAEAPGGIYVIGNAPTALLELIRLIKEGAAQPGLIIGMPVGFVSAAESKDELRKLDIPYITNIGRKGGSTVVVAAVNALSLLAARQAGESQNQGG
>NZ_CP048429.1|WP_062524753.1|4229866_4230646_+|precorrin-6A-reductase
MIFMLCGTSDARELALALSREQLPLLASVVTPSAAEQLEAAGITTRIGRLDQQGMIACLRELDCSAVIDASHPFAQEAHNHAVGAAAVLGLPYLRYERPSLKYEQHPRLLVVSSYEEAARRAKQLKGSVMLTTGGKTLEIFAEALLGDPAIRLTVRLLPCLENMQKCQLLGIEQRNIIALQGPFSRELNEALYRQYGTQVMVTKESGAEGSLDEKVYAALDMGIYVILIARPQAFYGEYGRVYGSFEEIVSAVTAFNKK
>NZ_CP048429.1|WP_082722727.1|4229000_4229861_+|hypothetical-protein
MGRGGSDPDANSDFYKLTRLLWERTPYKSVEACFIAITKPSLPAGLERCLALGARKIIVLPYLLFTGVLMKQFNETVNRFAAAHPEIEVEAGTYLGSHPLLSDMLLERIEETLAGRTAANCDNCKYREEASAHHHHHHHDHHHHDDHHHHHNHHSHGEEGHGHGCHGGEGHGHCGHQGGNHGHGHGYGQGHESEHEHVDGHHAGHGKGHGHGHGEKHECGHGEEHGCEHGHQVGHQERGQQAAYDGHKSGRNSQPASADAEGRVPQQPGASYSEVAVHPANAPKEH
>NZ_CP048429.1|WP_062524875.1|4225967_4226846_+|ABC-transporter-ATP-binding-protein
MDYILAFEDVVFHYPDTVEPALRGLTAAIPRGCKTALLGHNGSGKSTLFLHAVGLLRPQRGRVLQAGLPVSYAKKELAALRRRVGLVFQDPEQQLILGTPQDDISFGLRGAGMDEAEIAARCAVVLELLNLSAIQDKPIHQLSLGQKKRTALAGVMAMEPELLLLDEPTSYLDPLSEAQLLDGLDSIHRKGTTVVMATHDMNLAYRWADWIIILDQGVCRAAGAPEGIFAGGELLQRLGLALPLLAELWHSLPPSVTAGHTAPRNAGEFKALLNSLLGEGMGERARVAGRQQ
>NZ_CP048429.1|WP_062524758.1|4225107_4225896_+|cobalt-ECF-transporter-T-component-CbiQ
MIRRIDAISCSNALSRMSPMWKSLFAAIMFALAYVLHPALQVLITLWMMLWCLQYAKIPPRAYGQLFGTALLFYGLSLPALLVELGRPAAGEAVLYLRIPGTAQFLYMTPAGGMRAALLLARVSACLACCLFIMLTTPFGELLQVLRRLRMPQIVLELMLVMYRFLFLLDDAAHGLLLARRLRGGHRGFRSRLREAASMAASLFANTMHRYYGLSQGLAARGFTGEILLPPYVKREVPRRFAFEAYAGIVLLAAAQLWMLWT
>NZ_CP048429.1|WP_062524742.1|4239200_4240082_+|ROK-family-protein
MKVLGAIEAGGTKFVCGIGNEDGTIIDRVSFPTTTPEETMGLVLDYFTGKNVEAIGIGSFGPIDPVIGSPTYGYITTTPKPHWGQYNLVGTVAGHFSVPIGFDTDVNGAALGEYTWGAAQGLDSCLYITVGTGIGAGAVVGGKLVHGLSHPEMGHILVRRHPEDQFEGFCPYHSDCLEGLAAGPAIGKRWGKPAGELPADHPAWAMEAHYLAHALMNYVLILSPQKIVMGGGVMKQSQLFPLIHTKLQELLGGYVQHPALNEGIGSYIVPPQLGDNAGLSGALGLAKLALDRE
>NZ_CP048429.1|WP_062524740.1|4240438_4241458_+|HRDC-domain-containing-protein
MQIVFMNRLSRMSGADQEVFAQLWIGEEEGIWRLGWRDFSGSEETGDSLWYEGGSWNEMLCVYRHELAVKMGDGYRPLIDGAFHDEDSLSGSRNQEQLKLQYFSEQHSNESVYDELCSWRRGKASSERKAPYILASNRLLRMLSAFLPRTLEELLQIPGVGEGKASQYGEDWLGITSAAEREHGFPLGWVHEAVDEERFVSWQYKQKELKYKKQLERLRLRRVLLQGIGEGLGLEQLKAVSGVSRREVLEAVEELEKDGYSVEKLIALELAEVSSSEQASVWTAYELMGDTFLKPVLYKAYGEGFSPAEGLDMYYERLRLIRIRYRRGQAAQLEAATNL
>NZ_CP048429.1|WP_062524738.1|4241787_4242732_+|1-phosphofructokinase-family-hexose-kinase
MIVTLTVNPSVDASTGIDKVVPDHKLRCREASYKPGGGGVNVSRAIHRLGGESLALYASGGLHGQLLHEMLEQEGVSHQEIPISGQTRENLIVVEESTGQQFRFDMPGPHFIEGDWQQCLQQLKSLSGKPDYIVASGSLPPGCPVDFYGRVIEAVKPWQARVIVDTSGEALQKAADAGVYLLKPNARELEELAGHSITGDAEVRAAALELIEQGRTEVVVVSLGGEGALLITREGCEHLKAPEVPVLSVVGAGDSLVGGLVYSLERGWPLRRAVQFGIASGAAAVMNPERQLCKREDTERLFMQIEAADAETQR
>NZ_CP048429.1|WP_062524736.1|4242802_4243738_-|magnesium/cobalt-transporter-CorA
MKIRLVNAGVFTPVDDIEETLTAPAEGFYWIDADVEDLELLQPLYNLHDLAVEDCLSEEDQRPKLEIYESHYFIVVNSIRFDDEEIFLRALNVFLGRNFIITVTKQKIHELRVLKPLLWEQEVSEPDRFLYLLVDLVVDNYFSVGDRIEARIEKLEEDILMHTKKSHLSEIIGLRSEILWLKKMLGPQKEVINTLNKKDLRLIDDQLQKYFSDIYENAVKISETFETYRDLMGNLREAYQSSIANRANEIMRVFTAITTIFMPLTVITGIYGMNFDNIPELHTRYGYYGVIAVMVTLGCGMLFIFRKKEWL
>NZ_CP048429.1|WP_062524735.1|4244392_4245322_+|homoserine-O-succinyltransferase
MPIKIPDSLPAKEVLSGENIFVMDESQAFHQDIRPLRIAILNLMPTKETTETQLLRLVGNSPLQVDVVLLHPSSHTSKNTSAEHLKSFYKTFDEISDRRFDGLIITGAPVEQLEFEEVNYWEELKVIFEWSKHNVTSTMHICWAAQAGLYHHFGVRKVNLDEKCFGVFPHTVNQNNVKLLRGFDEVFHVPHSRHTDVSREDILANPELQILAESEEAGVYLVSTLDGKQIFVTGHSEYDPFSLKWEYDRDIAKGMDIAIPKHYYPKDDPLRTPPAVWRAHANLLFSNWLNYYVYQETPYDIDQADYLVF
>NZ_CP048429.1|WP_062524733.1|4245361_4246561_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MDEKLRIESRLAQIGSQEDPATGAINYPIYNATAFRHPRLGQSTGFDYIRTKNPTRLVLEEAVAELESGDAAFACSSGMAALTTIFALFGQGDHLVVSLDLYGGTYRLLERILSKYGISASYVDTNDLDGLEASRRPNTKAVFIETPTNPLMMITDIEAVCTWSRRHGLLTIVDNTLLSPFFQRPLELGADIIVHSATKYLGGHNDVLAGLIITKGTELSAEMAVLHNSLGAVLAPNDSYQLMKGMKTLALRMERHESNALALARYLLEHPAVAEVFHPGLPDHPGYEIQKRQSSGNTGIFSFKVKDARYVEPLLRHIRLIAFAESLGGVESLMTYPAVQTHADIPVEIRDAVGVDDRLLRFSVGIEHADDLIADLGQALEAARTELEEASAGTTLAAE
>NZ_CP048429.1|WP_062524731.1|4246749_4247886_+|dehypoxanthine-futalosine-cyclase
MSAIDLILDKTLKGERLGLEDTVRLFESNEIEKMGAAADVIMKRWHPDPLATFVIGRNINYTNVCDVYCRFCAFYRRPGSEEGYVLPDETIFQKIQETIDVNGTEILMQGGTNPNLPFSYYTDLLRGIKQRFPEITMHSFSPAEIMKMVEVSGLPLEQVVREIHAAGLDSLPGGGAEILDDRTRRKISRLKGSWREWMDVMQTAHKIGMNTTATMVIGLGESMEERALHLLRVREAQDECIANKYDSEGFLAFISWTFQPDNTNLKLDRQTPEEYLKTVAISRLVLDNIKNFQSSWVTMGPEVGKLSLQYGCNDFGSTMIEENVVSSAGATHKVNIESITQLIREAGKIPAQRNTRYDILRVFDDADAKIDNDFVMQN
>NZ_CP048429.1|WP_062524728.1|4248169_4252552_+|bifunctional-2',3'-cyclic-nucleotide-2'-phosphodiesterase/3'-nucleotidase
MGERSWNKPIASILATTVLAAQVLGGVFAVPVLGAGKAEAAGVETVDPGTPGTINLRLMSTTDVHTNVMGWDYFKNNPSLTVGLDRTATLVKQAKAEPKGTYNLLLDNGDLIQGTPLGTYMSKQADPEGKLNQIHPMIAAMNIMGYDAATLGNHEFNYGLNYLESVTSATYATYSHSNNFPKFPYLNANVYVDDKDNNPGNDENYFTPYKILDKKVKDSNGVEQTIKVGLLGLVTPQIMDWDKANLEGKVITKDIAATASKFVPQMKAEGADIIVAMAHTGFDGSAVEGDFSENDINALSKVAGIDAITFSHTHKVFPAADVKSLDASFKDAAGNELPGIDNAKGHINGVPAVQAGYGGGYLGLIDLAISPDPAKSGHWKVDKSASTSSTRSIYRTENKVNISNVEPDPEVDAAVAANHQATIKYVNEPLGTTTVPMNSYFALVQDDPTVQIVTYAQKRYVENLINTDPSLAQYKGKAILSVGAPFKAGRNGPEEYTEIEAGPLTIRSASDLYLYDNTLKAVEVSGATVKEWVEMSAGAFNRIDPAVTTPQELLNSKFAVYNFDVIDGIKYKIDVTKNAKYNTDGTINDGSSSRVTSITYNDQPLNMDQKFIVVTNNYRASGGGNFPIKDGKLIIDTLEENRQVLMDYIKEAGTVNQPADNNWSIAPIKGDVKVTFTSSPKANKVLLKDDRISDTGTQNDRGFEIYNLDLSGDVKVHILGINDFHGQLDTTSYVGDNAVGTAAILATYLKTARAQYANSLLVHNGDSVGASAPVSSMERDKPTLEWMNLMKFDVGNLGNHEFDQGVAALKAQIYGGVDPVNKTITHAPVNFDYINANAVDKDTGKPIIKPYTVKEVGGVKIGFIGVVTKATPSKVSPAGTAGVRFLSAEEEVAAIGKYAAELQKQGVETIIVLAHDPATTKGDVTTGEAADLAKALPADSPVDVIVAGDNHALANGVVNGKLIVQAYSYGTAFEDIKLVIDPITKDVKSKSATVTSTIQKNVTPDKETQDLVNYYLKKYPVLTLPVGTTDGSVTRTDAYNNETPLGNLIADAMRQADFKDGSKDIADFAFMNPGGIRADLPKGNVSFGDLAKVQPFGNTLVKLTLTGEQIKTLLQQQWGTKADGTADTKTLQISGLKYTANMYLPVADRIASLTKTDGTPISMTQSYTAVVNNFMAAGGDNYSVLTQASESLAGPIDLDVFYEYVKNTFKGGPITAAIEGRITNNLTASTPAPGQGGGGGGGTAPTATPKPTATPAPTATATPAPAATATPAPTPTPVITFGDLGKVAWAQEAINALAAKGIIKGIDGKNFAPNKTVTRAEFVTMLVRALNLPSGASTNFSDVKQGVWYTDAIAAAVNAGIVKGSGNGKFEPGREVTREEMALMIAAALKDQLQPIDSASLLAGFGDKSKIASYAQEAVAQLTQLGIVNGVDGKKFAPKSDATRAQAAVIIYRMLEKKAS
>NZ_CP048429.1|WP_062524726.1|4252653_4252836_-|hypothetical-protein
MSVKEQVFDIIKASETPLSAGEVEKLSGLERKAIDKAFTELKKENAIVSPIRCKWEAAVK
>NZ_CP048429.1|WP_062524724.1|4252998_4253841_+|SPFH-domain-containing-protein
MKEKTLHPVSGFLVIALIAICVAGGIYGAAHDYAVIPVVLFVLAGVLCTSITVVQPNKSVVVTFFGKYVGTIATSGLFAVIPFSVRKNVSLRVRNFNSATLKVNDVEGNPIEIAAVIVFKVVNSAKALFDVDKYMAFVEIQSETALRHVASRYPYDNFNESGMSLRANSDEIAKELATELQERLSLSGVEVIEARLTHLAYSTEIASTMLQRQQASAILSARQIIVEGAVGMVDMAIRQLKESGVVELDEERKAAMINNLMVAIVSERGASPVINAGSLY

Crispr_ID: NZ_CP048429_27

• CRISPR_ID: NZ_CP048429_27
• CRISPR_location: 4286298-4286494
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP048429_27

Consensus_repeat	Method
GAATCCGGCACCTTGACCGCCGCCGAGCTG	PILER-CR

spacers of NZ_CP048429_27

>27.1|4286328|54|NZ_CP048429|PILER-CR
CGCCTGTACCTGTGCGCCGAGGCCATTGTCCCCGCCGAGCTGAAGCCCGGTATT
>27.2|4286412|67|NZ_CP048429|PILER-CR
TTAGACCTAAGTGGCCTTCTGCATTGGCCTGCAGACCATAATCTCCTCCGACCTGTGCCCCCGTTTG

CRISPR arrays and Neighbor proteins around NZ_CP048429_27

CRISPR arrays

The CRISPR arrays of NZ_CP048429_27

>merge|NZ_CP048429|27|4286298-4286494|PILER-CR
AAGCCTGCTCCCTGACCGCCGCCGAGCTGCGCCTGTACCTGTGCGCCGAGGCCATTGTCCCCGCCGAGCTGAAGCCCGGTATTGAATCCGGCACCTTGACTTAGACCTAAGTGGCCTTCTGCATTGGCCTGCAGACCATAATCTCCTCCGACCTGTGCCCCCGTTTGGAATCCGGCCCCTTGACCGCCGCCGAGCTG

>NZ_CP048429|27|2|4286298-4286494|PILER-CR
AAGCCTGCTCCCTGACCGCCGCCGAGCTGC	GCCTGTACCTGTGCGCCGAGGCCATTGTCCCCGCCGAGCTGAAGCCCGGTATTG
AATCCGGCACCTTGACTTAGACCTAAGTGG	CCTTCTGCATTGGCCTGCAGACCATAATCTCCTCCGACCTGTGCCCCCGTTTGGAATCCGGCCCCTT
GACCGCCGCCGAGCTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062524672.1|4288219_4290610_-|transglutaminase-domain-containing-protein	unknown	unknown	gnl|CDD|376628
NZ_CP048429.1|WP_062524691.1|4279496_4280714_+|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl|CDD|224089
NZ_CP048429.1|WP_062524669.1|4292714_4293728_-|bifunctional-glycosyltransferase-family-2/GtrA-family-protein	unknown	unknown	gnl|CDD|133022
NZ_CP048429.1|WP_062524670.1|4290852_4292247_-|SpoVR-family-protein	unknown	unknown	gnl|CDD|377285
NZ_CP048429.1|WP_062524678.1|4287029_4287518_-|DinB-family-protein	unknown	unknown	gnl|CDD|378981
NZ_CP048429.1|WP_062524689.1|4281588_4282284_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP048429.1|WP_062524665.1|4294843_4295572_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP048429.1|WP_082722720.1|4287675_4288116_+|hypothetical-protein	unknown	unknown	gnl|CDD|226231
NZ_CP048429.1|WP_157243826.1|4276554_4276701_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524661.1|4296646_4297564_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213235
NZ_CP048429.1|WP_062524687.1|4282309_4283083_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524697.1|4277023_4278091_-|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl|CDD|378342
NZ_CP048429.1|WP_062524684.1|4283155_4283980_-|hypothetical-protein	unknown	unknown	gnl|CDD|227769
NZ_CP048429.1|WP_062524663.1|4295568_4296504_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|340423
NZ_CP048429.1|WP_062524659.1|4297556_4298255_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|378937
NZ_CP048429.1|WP_062524693.1|4278773_4279430_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NZ_CP048429.1|WP_025706451.1|4276262_4276517_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|131898
NZ_CP048429.1|WP_062524695.1|4278087_4278495_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062524667.1|4293724_4294702_-|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl|CDD|378342
NZ_CP048429.1|WP_062524681.1|4284155_4286051_+|PrkA-family-serine-protein-kinase	unknown	unknown	gnl|CDD|225357

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062524691.1|4279496_4280714_+|PLP-dependent-aminotransferase-family-protein	gnl|CDD|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.17412e-104
NZ_CP048429.1|WP_062524670.1|4290852_4292247_-|SpoVR-family-protein	gnl|CDD|377285	pfam04293, SpoVR, SpoVR like protein. Bacillus subtilis stage V sporulation protein R is involved in spore cortex formation. Little is known about cortex biosynthesis, except that it depends on several sigma E controlled genes, including spoVR.	0
NZ_CP048429.1|WP_062524678.1|4287029_4287518_-|DinB-family-protein	gnl|CDD|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	5.48716e-10
NZ_CP048429.1|WP_062524689.1|4281588_4282284_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.01542e-65
NZ_CP048429.1|WP_062524665.1|4294843_4295572_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.91593e-87
NZ_CP048429.1|WP_082722720.1|4287675_4288116_+|hypothetical-protein	gnl|CDD|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	2.29183e-20
NZ_CP048429.1|WP_062524672.1|4288219_4290610_-|transglutaminase-domain-containing-protein	gnl|CDD|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	3.50243e-09
NZ_CP048429.1|WP_062524661.1|4296646_4297564_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	6.99901e-97
NZ_CP048429.1|WP_062524669.1|4292714_4293728_-|bifunctional-glycosyltransferase-family-2/GtrA-family-protein	gnl|CDD|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.00469e-33
NZ_CP048429.1|WP_062524697.1|4277023_4278091_-|phosphodiester-glycosidase-family-protein	gnl|CDD|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	1.95955e-31
NZ_CP048429.1|WP_062524684.1|4283155_4283980_-|hypothetical-protein	gnl|CDD|227769	COG5482, COG5482, Uncharacterized conserved protein [Function unknown].	2.16163e-53
NZ_CP048429.1|WP_062524663.1|4295568_4296504_+|sensor-histidine-kinase	gnl|CDD|340423	cd16947, HATPase_YcbM-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis YcbM. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis YcbM, a HK of the two-component system YcbM-YcbL. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA).	1.10771e-56
NZ_CP048429.1|WP_062524659.1|4297556_4298255_+|ABC-transporter-permease-subunit	gnl|CDD|378937	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	2.45854e-05
NZ_CP048429.1|WP_062524693.1|4278773_4279430_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.31317e-29
NZ_CP048429.1|WP_025706451.1|4276262_4276517_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl|CDD|131898	TIGR02851, stage_V_sporulation_protein_T, stage V sporulation protein T. Members of this protein family are the stage V sporulation protein T (SpoVT), a protein of the sporulation/germination program in Bacillus subtilis and related species. The amino-terminal 50 amino acids are nearly perfectly conserved across all endospore-forming bacteria. SpoVT is a DNA-binding transcriptional regulator related to AbrB (See pfam04014). [Regulatory functions, DNA interactions, Cellular processes, Sporulation and germination].	7.47932e-12
NZ_CP048429.1|WP_062524667.1|4293724_4294702_-|phosphodiester-glycosidase-family-protein	gnl|CDD|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	2.49166e-42
NZ_CP048429.1|WP_062524681.1|4284155_4286051_+|PrkA-family-serine-protein-kinase	gnl|CDD|225357	COG2766, PrkA, Putative Ser protein kinase [Signal transduction mechanisms].	0

Protein sequences

>NZ_CP048429.1|WP_062524681.1|4284155_4286051_+|PrkA-family-serine-protein-kinase
MDIFERIASYRAENDRLAWSGTFKEYIELLKKDPSPAKTAHSRVYDMIKSHGVEDINGRKRYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVTLLKRGLEQYSRTDEGAVYAIEGCPMHEDPLHLIPLELRPEIERELGVRIEGNLCPSCQMRLKNEYHGDIEQVKVVRVLLSEEERVGIGTFSPSDPKSQDIADLTGSIDFSTITEFGSESDPRAYRFDGELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADEMIIAHTNETEYKSFISNKKNEALQSRMIVMPVPYNLRVSEEEKIYAKLIAQSDMKHVHIAPHALRAAAIFSILTRLKESKKQGMDLIKKLRMYDGEEVEGYKEADLKEMQTEYLDEGMSGIDPRYVINRISSALIKNDLKCMNALDVLRAIKDGLDQHPSITKEERERYLNFISIARKEYDILAKSEVQKAFVYSFEESAKTLFENYLDNIEAFCNWTKIRDPLTDEEMEPDERLMRSIEEQIGISENAKKAFREEILIRISAYSRKGKKFEYNNHDRLREAIEKKLFTDLKDIVKITTSSKTPDESQLKRINEVSRRLIDEHSYCPICANELLKYVGSLLNR
>NZ_CP048429.1|WP_062524684.1|4283155_4283980_-|hypothetical-protein
MAVKHETELYAPLKSFFEKQGYDIKGEVRTCDLVGLRGDEEQPLIVEMKKSFNLALLLQGVERLRLSPNVYLAVERVRDKKGAVNQRWGELTGLCRRLGLGLVTVVFYKTKAPLVEVLAEPGDAPPQARGGARRRERLLYEFRERSGDYNTGGSTRVKLVTAYREKALRVALALQAAEAEAAHAAGLAQARRAARSGAPEADPAAERSRAEAPPGVTPAELRKRSGVPGAAAFLQKNYYGWFFRVGRGRYTLTAAGTAALIEYAAIAEISAGKL
>NZ_CP048429.1|WP_062524687.1|4282309_4283083_+|hypothetical-protein
MVQLNQFKLECRKHCAVFATFTGISVLTNLYFLFSQDQDLSFVFLLVNMVIGILLPVYIYLDYYREFFTGTMPINHLLPLRTSALFGVKSAVFMLGLILVWLPSLLDVFVNPAGLYQQRIMHSDSPALGIAYLVLSKLCSIPAGLAVMGLALAAAKRLRKPVLSHLCIALVMVLVVGIQFALVVRNSWHWSIGTSAAETFKQYANLLTVSPVSQVQPADINESIRWSSVGMNLLVALVAGTAGRYLFNSRKYEIFGK
>NZ_CP048429.1|WP_062524689.1|4281588_4282284_+|ABC-transporter-ATP-binding-protein
MENVLECSNLTKRYGKKVALDNLNLTLPKGRIVGLLGPNGAGKTTLMKLIVSLLRDYKGSITVCGRQPGLDTKRIVSYLPDREFLYPWMTIEECISFFRNSFEDFQLDMAYAMIEELSLNPAEKVKNLSKGMQERVSISLVFARKAKLYVLDEPLAAVDPSTRDKIMRIILDHFDPESSILLSTHLIHDVESLFTDIAIVNEGRVQLYGGIGELQKDYGMPIEEIFKQLVG
>NZ_CP048429.1|WP_062524691.1|4279496_4280714_+|PLP-dependent-aminotransferase-family-protein
MKYEFSARAHTLHSSPLLSIRTETRRGTLISLAEELPAEELFPLSLLAETASTVISADAGALQYGDPEGYGPLREWLTGDWLKAKGVAVAAGGVLLTTGSQQAIDLLSRVYIDPGDRVLVENPTSPGILQALRMQGAVIIPVRGDQDGLLPEHLRTQIRQHRPKMLFATPSFTNPSGILWSLARRKEVLELCTTHNVLIVEDDSYGDLHFQKYTEHHSVKYPSLYALENVSEGGHVLYIGSFSKTVAPALRTGWAAGSRELIGMMAAAKQMADWQSSSLNQRLLHHLLDVTAFDLREHIALLNREYNTRLKLMAELLKRPAWKSSSYCLPAGGMFLWVTLPEGLDAMALLKASLAKGVAFLPGPLCSVSGGSGRIRLNFSHPGRDELLLGMNLMSEAVTEFTARS
>NZ_CP048429.1|WP_062524693.1|4278773_4279430_+|response-regulator-transcription-factor
MMKVWRVIIVGCHPTSMLGTKLILEESKEIEVVGMFSNWSEGVYTVQQQQPDLVLTDYQMPEGNVEGALVEMKQSSKSTHFIIMTEEEDKELFQPLIELGASGVLSKGASPRQLLQMINGLREGFLSIPLEWARDGFRPVASSRGLDGVLQLTQTEMFIMERIVQGITYDKIAHEIEVSRRSIDNYLRKIYVKLEVSTRAQAIEKFALFSRQNKQMYA
>NZ_CP048429.1|WP_062524695.1|4278087_4278495_-|hypothetical-protein
MQPLAESTPVHSRTASARSRSSVKWFLLFWILMIGLGFYAVYSYTNHLKEQVLNELSTQSQQQLTVLKTDYESRIGVLSQQVKELQSTVDTFNELLTFTKDNASNKTDNSNKLYTQLNEVRKQLAALQKEMDLLK
>NZ_CP048429.1|WP_062524697.1|4277023_4278091_-|phosphodiester-glycosidase-family-protein
MMTPVKKINRFFMLLTAPFFGLLLCLWWYQPPLDLNLGVGQFAAEPGPVKETAELQNALTTAQAAASYTIHSISASAKLYNQTTNAMNALVQMAKTQAARPELIYNRRISSRLGIPADVARSDRITIELYRLNPGNYTAYAMKIKLKDPAAMKMSLAGDGKGGAETTLQAANRYGATAGINAGGFADRDGKRYPLSTTVIGGEYLYGFESTYKDLSFVGLNASGQLIGGKFYSRTQLDQLQPVFGATFVPVLLKNSVKVPIPTKWQLSPKRAPRTVIGKYKDDQLLVMVADGYNENGNSGATLEELQNKLWNMGVIDAYNLDGGGSSSLIFNGRVINNPSDGNLRKVPTNFLFFK
>NZ_CP048429.1|WP_157243826.1|4276554_4276701_+|hypothetical-protein
MAIVHRKGNNLRSLGGLPIPDFFTKSGLQPSGDCCAMGAVTIHFREEG
>NZ_CP048429.1|WP_025706451.1|4276262_4276517_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MKPAGVVRKVDQLGRIVLPKSLRKRYQMNEGDPVEILVQGDHIILERYRPKCVFCGSMEGVSEYKDRYICADCLTEMTQLPRHA
>NZ_CP048429.1|WP_062524678.1|4287029_4287518_-|DinB-family-protein
MAAKTNEQLVFEFQALIPYIQSLATLEEADWETPVAAGKWTLKEMLCHITQWDKYFYEEAFAKIQNGQPLTIRHQNFDEFNARAIDYAKSLTVQAAIGQFVLYRTKILETTAGLTDEEFTQPCLDGDGKKFSIRGYLRDFIPHDKHHKRQMEQYLKTVKSGK
>NZ_CP048429.1|WP_082722720.1|4287675_4288116_+|hypothetical-protein
MIKSPIGERPGDSVNYSKDIILNPPKHGEVGLCVPAFDSGKAAYLLGVIVEDFSRVTDEMITVDVPEAEYAVFTTPPVDTSGGKAQEEFVQTIKSTWKYIFEEWFPGSGYVYDEGKLNFEFYDERCHSRADTVMEIYVPVRERAGK
>NZ_CP048429.1|WP_062524672.1|4288219_4290610_-|transglutaminase-domain-containing-protein
MKVKQLAMIMFIMCVVLTGCMGGSKDAGQEPSHAPQASAAAETKKPSGNPPPDASQTVYDLKQKYDTDNNPGIMPMYNVEQDMEFIFRFNTDLGPEAIGKTLSVHTDIKALPESKVGTLEDSQLVDGKSVYSIKPLGFGVLSSDSLREAGGSSWGNAPVYYIRLNYDLDAAAPTPLKQPIIIPFTVKSDLPVPNLQPDISPDGRLTLAWSEVPGAESYNIYSASHITMENTNEALSGAEQGYADQRPLLIATVPGTSYNDFMKDGRGALGIVDETITSIQNNNVQGEYYVTAVQGDKESKFSAPVDTVALSKQLPRTVASEDNINLKLFKNAGELPKTVPVQFIDGSKAPGTVIYDTGSITIQQSGPTDVRFSIQGTALKGYVQVEKLTDADIASLAAAQSKGTNQGYVEPQNNTDYVPAPDVPTIIDNNGNGSESESGDNVIDRQKENTRNKVDEGNKQTVPAPTISEDLIHADSALEEYLTLNLMSGKTEIPLQAFPEAQNARTLVDVIEKVVYQNPLILGFRSYGYDYQTLTLHVEYDDPAEVILSKQLEILAEADKVIAATIKDGMSVDEKQMAIYNYLNDNTTYDDAALENAKQQEFKGVDAKFNDSFSTYGILVKKVGVCMSYAHTFQLLSDLAQVPSMVVTGTMDGVNHAWNKVKIGEEWVNVDPTNNETNSGLPYLLYNSSDATAADVDYVMDNSSWLDNELSRFQATSNAHDYYVTHGLEADSLEAYKTKLAGQLKQGKTLVVLRVLADTDSAELTQKTAEVIQQYDPSKLANAGMVELGSYVAVQL
>NZ_CP048429.1|WP_062524670.1|4290852_4292247_-|SpoVR-family-protein
MPGDEIQALERAIAEITEIASGFGLDFYPMRYEICPADIIYTFGAYGMPTRFGHWSFGKTFHKMKSQYDFGLSKIYELVINSNPCYAFLLDGNSLVQNKLIVAHVLAHCDFFKNNMRFSMSNRDMVESMSATADRIADYSVTYGVDTVESFIDSVLAVQEHIDPSLIQPRKLGKAHLLEAKMKERKDAPPGGAGPANPYDELWDLENSKTAGPEPETAGKRRFPPEPEKDMVWFIQQYSTALEDWQRDIMTMLRDEMLYFWPQMETKIMNEGWASYWHQRIMRELDLTPEETVEYAKLNSSVVQPSRQSLNPYYLGLKIFEDIERRWDRDKMFEVRELDSDISFIRSYLSKQLVNDLDLYVFEKKGPEWKITDKAWENVRDQLVLARVNGGSPYLVIEDADYERNGELLIVHRYESIELDLKYLERTLPHIYALWGRTVHLQTVVEDKKALFTYDGKKVQRRFM
>NZ_CP048429.1|WP_062524669.1|4292714_4293728_-|bifunctional-glycosyltransferase-family-2/GtrA-family-protein
MTILIPAYEPDERLLDLIEQLCDYRLGPIVLVDDGSGPAYRGIFNIAEAFGCTVLTHPINFGKGLALKTGFRYIQEAGLTGCVVCADSDGQHLPHDIKRIAEVLQNQAAPGIVLGSRRFSGTIPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQLLDWLCRIPGERFEYEMNMLLTARREGYTITEEFIDTVYLDDNQSSHFRPLADSFRIYLPILMFSTSSLVSALLDFTLLFLFQRLSHNLFLSVTAARLCSSIFNYSMNRRYVFTGGKTSKLQQSLPKYFALVLLVLLFNYGLLYFYNEKLIIPLAAAKLLTEVSIFLFSYWAQRRFVY
>NZ_CP048429.1|WP_062524667.1|4293724_4294702_-|phosphodiester-glycosidase-family-protein
MKNMRTRQAWSFKRKLLVVMIVVLLGLGTVIYSLADRYLIKHVEVVVADDTAANGNSTAAAANTTAAEVKATSDDWNYSSDDIQIQIDQVQTGSGSDQITYFVADVVLKDASSLRSAFADNSFGTNITEDTSEIASSNNAIFAINGDYYGFRNDGVIIRNGTVYRDDPVRDAMALFGDGTMQTYNEEKVSSSDLLAQGAANTLSFGPILIQDGKTASDFSNVKIDTNFGNRSIQNANPRTAIGMIAPNHYVFVVVDGRSEGYSRGMTLTELANVMSDLGATEAYNLDGGGSSTMYFMGRVVNNPQGKNQERGVSDILYIKEGAAS
>NZ_CP048429.1|WP_062524665.1|4294843_4295572_+|response-regulator-transcription-factor
MPQRVLLIEDDEAISEMVRSYLVKEGYEVETAFDGDAAEKLFHRGGAYDLVLLDLMLPKRSGSDVLQTIRRDSLVPVLIMSAKDSDVDKALGLGFGADDYITKPFSMIELAARVKAAIRRAGYAAVGGPGQEAAPVQEKANIISLRGLSVDLDNFSVLKNGEEVKLTAKEFQILGLFVSSPGRVYTKSQIYNSVWEDDYYGDENVINVHMRRLREKIEDDPSKPEYIKTLWGIGYKLGDVLE
>NZ_CP048429.1|WP_062524663.1|4295568_4296504_+|sensor-histidine-kinase
MIAFWSVAVLLLLLVILWQYLRLREHSRQLDYIHTKLTDIMDRGSHERLLLFNSDPHLQKLLTDLNRLLDVNHRGAVELAKLEKSMRSMLANISHDLKTPLTVVLGYIETVLQDPAMSKEEQEKILRMIHVKAGEVIRLMNSFFDLAKLESGDKDIPLSRVELGEVCRRNILSFYEILNAKGSEVDIELPDEALYIMGNEEALDRVLSNLLSNAIKYGDAGGVLGLRLYSDGDQVCIEVWDRGKGITEGDQDKVFERLYTLEDSRNRDYQGSGLGLTITKRLTEQMNGTITLRSKPHVKTAFTLSFRRQTF
>NZ_CP048429.1|WP_062524661.1|4296646_4297564_+|ABC-transporter-ATP-binding-protein
MTTILRTWDLTKEYQGKEAVSGVNMSIKQGEIYGFLGPNGAGKTTVMKMITNLVKPTAGNIEFFGESMTDHSYEMLKRMGCIIEYPVFYDKLTARENLQLHGEYMGYYDAKAMEEALELVKLRGVDKKPVKQFSLGMKQRLGIARAVMTKPELLILDEPINGLDPIGIKELREVFRMLSREYGMTLLISSHILGEIEQVADTIGVIRDGILVEEVAMDMIRSQNTQYIELITGASSKAVYVLEHKLGLTNFKVLDPRTIRIYDAVQQLELNKALIEAGVELDSLSKKNLSLEDHFVELMGGEGIA
>NZ_CP048429.1|WP_062524659.1|4297556_4298255_+|ABC-transporter-permease-subunit
MLKLIQLEIRKNKLTGMLKGVAIAVLMIFGFMLLLTYVDAEGGNGGGEFNTYTEMLEGLYILVKVTFVVFASVVLSKLVIDEYKNNTITLLFMYPISRKKLLGAKIIIVFLFTLLSVFISDILISALLIGINSFTHVIPGQLELTAIPGEVARIGADAIYAAGIGLIPLYIGMRKKSVPATIVTSVLFVGVSSSDFGGFRMSNLVGVSIFFSLLGVAIAYLSIRNIEQKDIA

Crispr_ID: NZ_CP048429_28

• CRISPR_ID: NZ_CP048429_28
• CRISPR_location: 4402808-4402882
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_28

Consensus_repeat	Method
AATCAGTTAACCTTTTTCCACTTA	CRISPRCasFinder

spacers of NZ_CP048429_28

>28.1|4402832|27|NZ_CP048429|CRISPRCasFinder
ACCTGCGGAGAACAGAGTACTGGGGCA

CRISPR arrays and Neighbor proteins around NZ_CP048429_28

CRISPR arrays

The CRISPR arrays of NZ_CP048429_28

>merge|NZ_CP048429|28|4402808-4402882|CRISPRCasFinder
AATCAGTTAACCTTTTTCCACTTAACCTGCGGAGAACAGAGTACTGGGGCAAATTAGTTAACCTTTTTCCACTTA

>NZ_CP048429|28|24|4402808-4402882|CRISPRCasFinder
AATCAGTTAACCTTTTTCCACTTA	ACCTGCGGAGAACAGAGTACTGGGGCA
AATTAGTTAACCTTTTTCCACTTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062524488.1|4412832_4414929_+|alpha-galactosidase	unknown	unknown	gnl|CDD|269892
NZ_CP048429.1|WP_062524503.1|4399884_4400811_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP048429.1|WP_062524860.1|4416867_4417992_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|99738
NZ_CP048429.1|WP_062524519.1|4390388_4390811_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225064
NZ_CP048429.1|WP_062524515.1|4391655_4392684_+|CapA-family-protein	unknown	unknown	gnl|CDD|214858
NZ_CP048429.1|WP_062524521.1|4389787_4390369_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP048429.1|WP_062524505.1|4398940_4399867_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
NZ_CP048429.1|WP_062524500.1|4402992_4405362_+|cellulase-family-glycosylhydrolase	unknown	unknown	gnl|CDD|366567
NZ_CP048429.1|WP_062524491.1|4409374_4411021_+|response-regulator	unknown	unknown	gnl|CDD|381091
NZ_CP048429.1|WP_074648288.1|4397183_4398755_+|response-regulator	unknown	unknown	gnl|CDD|381091
NZ_CP048429.1|WP_039788503.1|4415439_4415697_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|131898
NZ_CP048429.1|WP_062524495.1|4406439_4407330_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP048429.1|WP_062524502.1|4400877_4402458_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270298
NZ_CP048429.1|WP_062524513.1|4392911_4395287_+|glycoside-hydrolase-family-2-protein	unknown	unknown	gnl|CDD|225789
NZ_CP048429.1|WP_062524498.1|4405603_4406440_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP048429.1|WP_082722717.1|4390890_4391556_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NZ_CP048429.1|WP_062524509.1|4395408_4397145_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519
NZ_CP048429.1|WP_062524489.1|4411143_4412484_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270452
NZ_CP048429.1|WP_062524486.1|4415889_4416606_+|HAD-hydrolase-like-protein	unknown	unknown	gnl|CDD|136007
NZ_CP048429.1|WP_143013456.1|4407516_4409382_+|histidine-kinase	unknown	unknown	gnl|CDD|225519

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062524488.1|4412832_4414929_+|alpha-galactosidase	gnl|CDD|269892	cd14791, GH36, glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.	4.75603e-90
NZ_CP048429.1|WP_062524503.1|4399884_4400811_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.51774e-62
NZ_CP048429.1|WP_062524860.1|4416867_4417992_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|99738	cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.	4.20656e-151
NZ_CP048429.1|WP_062524519.1|4390388_4390811_+|GNAT-family-N-acetyltransferase	gnl|CDD|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	6.47811e-15
NZ_CP048429.1|WP_062524515.1|4391655_4392684_+|CapA-family-protein	gnl|CDD|214858	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	7.88344e-93
NZ_CP048429.1|WP_062524521.1|4389787_4390369_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.27779e-11
NZ_CP048429.1|WP_062524505.1|4398940_4399867_+|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.49972e-103
NZ_CP048429.1|WP_062524500.1|4402992_4405362_+|cellulase-family-glycosylhydrolase	gnl|CDD|366567	pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35.	5.188e-55
NZ_CP048429.1|WP_062524491.1|4409374_4411021_+|response-regulator	gnl|CDD|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.46099e-46
NZ_CP048429.1|WP_074648288.1|4397183_4398755_+|response-regulator	gnl|CDD|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.63132e-44
NZ_CP048429.1|WP_039788503.1|4415439_4415697_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl|CDD|131898	TIGR02851, stage_V_sporulation_protein_T, stage V sporulation protein T. Members of this protein family are the stage V sporulation protein T (SpoVT), a protein of the sporulation/germination program in Bacillus subtilis and related species. The amino-terminal 50 amino acids are nearly perfectly conserved across all endospore-forming bacteria. SpoVT is a DNA-binding transcriptional regulator related to AbrB (See pfam04014). [Regulatory functions, DNA interactions, Cellular processes, Sporulation and germination].	5.76599e-16
NZ_CP048429.1|WP_062524495.1|4406439_4407330_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.49584e-77
NZ_CP048429.1|WP_062524502.1|4400877_4402458_+|extracellular-solute-binding-protein	gnl|CDD|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	5.42764e-31
NZ_CP048429.1|WP_062524513.1|4392911_4395287_+|glycoside-hydrolase-family-2-protein	gnl|CDD|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	1.45208e-54
NZ_CP048429.1|WP_062524498.1|4405603_4406440_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.63664e-65
NZ_CP048429.1|WP_082722717.1|4390890_4391556_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.35738e-16
NZ_CP048429.1|WP_062524509.1|4395408_4397145_+|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	4.85194e-45
NZ_CP048429.1|WP_062524489.1|4411143_4412484_+|extracellular-solute-binding-protein	gnl|CDD|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.09721e-38
NZ_CP048429.1|WP_062524486.1|4415889_4416606_+|HAD-hydrolase-like-protein	gnl|CDD|136007	PRK06698, PRK06698, bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated.	1.35508e-38
NZ_CP048429.1|WP_143013456.1|4407516_4409382_+|histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	3.64266e-43

Protein sequences

>NZ_CP048429.1|WP_062524502.1|4400877_4402458_+|extracellular-solute-binding-protein
MTNKKKKLTVTLATMMALGTILSACGGGNNNNTAAEATNAGTTATEGAAANSGAPDTSKEVKLKMLLVGGQPGDYDKVFGELNTKLKEKINATVETEFLDWSDWTQKYPLKFAANEDFDLVYTANWAFYNDQALKGGFLELTDDMLSKYMPQTWKAMPKVNWEQAKVDGKLYMVPNNNVEVTDKVVLYREDLRKKYNLPEINSPETYANYLKTVAKEEKGITAFGAKPADGWKFHELDQTLLEQNNNFNLVDANLLPLAYKLDDASGKIFNIYDTPEFTSLLKYYKDLADNGAWSKNVVSNKNDVWQDIKAGKVSSYAHNLGTVAANLAEMRRDKPDVELGIADLTPDKKKIAAISTQNGMSIHATSKNAERSLMLIDLLQNDKEIHDLTMYGIAGTNYIPEGDDKYKAGPAAANYTGFSNWGWNSPLNRQDAAYPKEADDMFNGWQSSIYHFPLETFVFDSTPVKNEVANIGNVMLRYAIPLEYGLIDDVEKGQADLIKQLKSAGIDKVQTEMQAQIDAFLAAQK
>NZ_CP048429.1|WP_062524503.1|4399884_4400811_+|carbohydrate-ABC-transporter-permease
MSTTTAKIQPAKVRKRVNTDRLVLSIVGYVTLTVLAIFCIFPFILVVSSSLSEESTIIEKGFQLIPANFSTEAYSLLFKYPAEMLRAYGVTISVTLIGTVAGLFLTSMTAYVLSRSDFKWRGRFSFFFFFTTLFSGGLVPWYLMIVNYLHLKDTLLVLILPMLMNVFYIIVMKSFMSSIPDAITESAKIDGAGDFRIFMQLIVPLSKPALATIGLFIALAYWNDWYNALLFISKSELMPLQYYLYKMLGNMDGMRKAMMASGAVVNSDLPTESLKMAMTIVATGPILLAYPFIQKYFVQGLTVGAVKG
>NZ_CP048429.1|WP_062524505.1|4398940_4399867_+|sugar-ABC-transporter-permease
MKQKQHGFWDDVKKYKSLLFMLTPAVLFFLLFAYVPMAGIVLAFKQFNYTGGVFGSPWNGLDNFKFFFDSGDAWRVTRNTALYNIAFIVVNNLLQIFAAILLFEVAGKWFRKLTQTMLFLPYFISWVVVGAIAYNLFNFDVGTVNVLLKGLGMQPIDIYNTAAYWPFILVIVSAWKTLGYGTIMYLAAITSIDTEMYEAAEIDGANIFQRIMKITIPNLFPTVIILVLLAIGNIFRGDFGMFYNMVGNNGLLFSSTDVIDTFVFRSLTTSNEIGMSAAAGFYQSLLGFVTIMLANYAVRKYDKDRALF
>NZ_CP048429.1|WP_074648288.1|4397183_4398755_+|response-regulator
MSINVLLVDDEAVDLEWLRRRVLSSGLNITVVGTAGSGFGALKIMEEAQVDIILSDIRMPIMTGTEFARRAKALSPKTKIVFISGHEDFSYAKEAIEINASGYLLKPVQDKDLYEMLGTLCATMEQEREQDRSFSEALSLVNKELLLRWFDEASPDSAEPHLKSILTPLLQKGAAAAIVEIDDLEWKMRDFSEEDARNITRRIAGVIKAFVEEGKLGTWIAVHHTRFVILSSFPQDSFLSLLEELIRKVAESSPCTVTVGVGRCAADEAGLHESYRQAQAALSAKWLLGKNRLIRDTTQPSTRGTPGTQIELTVERLLEAIIQYDLVSIDDHLLELFTKVLPSAGRKEVYELIIRITSKLHADLQQQNENLYELLQWESHQPDILFQFETIHDILSWLRRRFFELSELLYVKRQRQKRKLIDEIMRYVEEHLEQKITLKEVAAHFDFTPNYLGYLFKEESGLPFSEYVNERKTCRVSELLRDPTLKIYEIAERMGYKNIIYFNRQFKQTTGMTPGEYRKKHKI
>NZ_CP048429.1|WP_062524509.1|4395408_4397145_+|sensor-histidine-kinase
MPKLKKYMPFTYKMMIPYLLLVLLTDVTIGYISYSMLTDSRTEMAESNIRTGMEQARNNIRYQMDEIQRMSDNLFGSQPFQRALELKGTPFEIYLAMLDEIVPQITAPLQLFGNKIRFMLYTPNSDLNIVSGDNLDEPIYDSDYYILPLKDIAGSGWYQSLKDSKRDNLWLQIDTDQKLDNLSHIRRLVNFSDYKTVIGYVRITVSLEDLFGGFDTFPLEEGITLRLAEETTGDILFQRGTANYDDAGGDYLSLHEKIPGSSFVIESLVPDTYLTKDAGRLGRVIFALCALSFLVMTVIGYVVARLSGRKMSRIVGLVRAFQEGNFQKRIRFSGNDEFVQIADSFNVMATNIQELINSVYVQGIQKKQAELEALQAQINPHFLYNTLSTISSLANLGEIEKVTGMVQGLSRFYRLTLNQGNVYIELEKELEQVATYLEIQRVKYADAFTVYVDVEEEVLHLQVIKLVLQPFVENVFKHAWFGETIAIRLTGRRVGNNIELKVIDNGIGMRAEDIKRMMQGPSQAGGYGVKNVNERIKLRYGDDYGVTIASFFGAGTTVKLLLPAGIKVNEDMDEGFAP
>NZ_CP048429.1|WP_062524513.1|4392911_4395287_+|glycoside-hydrolase-family-2-protein
MSTAAGRSRSRFDENWSFYKGDIRIPHAVKAGMTGGITDCGSLQEGEWLDIAFNDKGMGHQQLEWKPVSLPHDWCVEQQYVQDASLGSRDGSHGYLPGGTGFYRKTFELPPDAADRKWTVTFDGASGLSTVWVNGHLIGEHRGGYIGFSYDLTDVLRYGGEGRNVILVKVEAVENEGWWYEGCGIYRHVWLEQTDRLHVAEYGTYITTPEAGKEQALVHISTRICNEYTESRAVSLHTEVYNASGEQVCAEAVQAFADWYGETELEQRFRLEHPALWSPETPHLYRAVSILKVDGIEVDRYETPFGIRSIRFDPEEGFFLNGEPLLIKGTCNHQDFAGVGVALPDSLIAYKLKLLKEMGSNAYRSAHHPPTPELLDLCDRIGLLVMDENRKLDSSRSGLSRLKRMLLRDRNHPSVIIWNLENEEVLEGTVTGRRLLKTLADTVKRMDPTRPTSAAMNHGWYENGYNEVVDITGYNYGHRDHLDIRDHEQHPGRLMIGSECASYTATRGIYENDTVRGYCSEYGTNIPSWGCTPQQAWSDVVNNRFLTGVFMWTGFDYQGEPTPYLWPCVNSHFGLMDTCGFPKDSYYYMQAVWKDEPIVHLLPHWNWPGSEGKPVEVRVFANTETAELMLNGSSLGEQQVDRTGYLSWVVHYEPGELKVTGRNGGKEAAVKKAVTAGQPYQIRLYPDRLAGQADGMDTIPVRVAVLDELGHVVPTADHEIRFEVEGAGILLGVGNGNPSSHEPDKSPVRRAFNGWCLALIQAAPEAGTATLRAVCTGLAPAEVLLDFSAAT
>NZ_CP048429.1|WP_062524515.1|4391655_4392684_+|CapA-family-protein
MRRFAVITLVLFLLIPGQAAFSQGASKPEKINLAFAGDILLDGFVGDQIANYGVNFPFARVGPVLKKADIAFANLETPVSVRGKAAEKSFAFRSKPAALAGLSDAGIDGVTLANNHILDFGQDAMLDTLVHLDKYKIGHTGAGKNSNEAFKPYIQTVKGKKIAILGVSRVLSSPSWYAGKNSPGAASAYTPEPMLGAIKKSAKENDFTIVYIHWNNEFKDYPEPYARSLAKQMIDSGADIIIGAHSHCLMGIEYYKHKPIYYSLGNFVFNRSTRGGDKTIHSMLVNFEISNTSVKSRITPVKIIGGQPNFMGGAYNKDTIKRMNQLSFNAVIAADGAVSEKL
>NZ_CP048429.1|WP_082722717.1|4390890_4391556_+|class-I-SAM-dependent-methyltransferase
MDMPTHPYVSRFFVNTDARRDKLIYDLPESWWSRPYEYEWCTNFVSPHDVVLDAACGISHPLKFYLAGYSAEVHACDIDARILSRDAIIQNIASDISEEAARLVEARRTTRLHLAQANLTALPYEDESFDSIFCISVLEHLSLEDSVRAVREFHRTLNGEGLLVLTFDYPTVNLLRMNEVLLQAGFEYWGETDFKLPADAVRTEQWGGLSCFRAVLKKARI
>NZ_CP048429.1|WP_062524519.1|4390388_4390811_+|GNAT-family-N-acetyltransferase
MRVERVTTQEQLQEAFRIRREVFVEEQGVALADEFDDYEKDAEHILLYQEELPVGTARLRSVDGWAKLERICLSAPYRKSGLGSVLIDTLEKMAVERGHRQAKLHGQKQAEGFYQRLGYVTSSPVFMEDGIPHVLMVKQL
>NZ_CP048429.1|WP_062524521.1|4389787_4390369_+|TetR/AcrR-family-transcriptional-regulator
MTAVAILQAALSQFAEKGFEGASLAGIAQSVGIKKQSIATYFPKKEDLFIAAFQEMARHYIEFLDRLYKEILGTPVEVRLREIVYRTYFYRVEYPVLTAFYKRSVQFPAPFFQEMLEQQISMMEQRSAAFYRAIFEEGMDSGEIRRQHTESLLSAYYCLQDGIAMQMFFYSQEEFGRRLKDIWEIFWAGIKQT
>NZ_CP048429.1|WP_062524500.1|4402992_4405362_+|cellulase-family-glycosylhydrolase
MTYIIQAGIAPKDIYPASLKLGGTNPQGDRISFTNYYMELNGKPYFAVCGEFHYSRYPEDSWETEIRKMKISGINIVATYIFWNHHEEIEGEFEWQGNRNLRRFVELCAQNGMYVILRVGPFCHGEVRNGGLPDWLFGRSFDVRSNDEGYLRYVRRLFQEIGAQAAGQMFKDGGPVIGIQLENEFNAAAALWELTAKQGDEYLSGGIGGGAGSEHMRLLKQYAVEAGMVAPVYTSTGWGAAPLLEDEVLPLYGGYAYTPWSISEQNPDQKPTPEYVFVNYHNETAETGEFNPPYAKTKYPFACCEMGGGMQTWYLSRFQVEPESVMAMSLMKIAGGCNFVGYYMFHGGTNPVGKTGYLNESTTPRITYDFQAPLGEFGQVRDSAHLLRPLHYFFHRFGERLAPMATVLPQGAEAITPEDAHTLRYAVRTDGSAGFLFVNNYQDHVEMDLHEDVRFAVRLAGETIEFPRKSSLTVRKNASFIFPFNFALDGLNLRYATAQPVTLVESAEAATYFFSMPEGVDGEFRIDAHTGITSVSADAGTVEMDAGNHYTVLIPHDRPGMIRITQEGAREIRIYAMNAQEAAMLWEMEEGGLPRIIFSEIPPVQTGEGIELFSSGKSSFSFREYSGGPAAPGKWITANTACSLAQHTEEWFHSYDLELPAKEVGLEFRKIHDHKIALGLASDVLEGVEEVLLSIDYTGNVGYAFAGGKLFHDHFYNGAPWEIGLSRFQDVLKGGEIILETTPLRRGITTVAADAAMAVEKQFTGEATAVFNSVNAVPVYRVALTRQAD
>NZ_CP048429.1|WP_062524498.1|4405603_4406440_-|carbohydrate-ABC-transporter-permease
MKTNNNKAGRIILEVVLVILSLLFLYPLFLTIINSLKSFSEVMTDVIALPKHLALSNYSYVWKFINYPRLFLNNFIITGLGLLGIVFISSIAAYKLARTKSRLSGIIYFLCIMPMLIPFQSIMLTVLQTAKNLNLSGSTWGLGLLYWGFGAPLAVFIYHGFVKGIPTEIDESATIDGASSFRLFFSVIFPLLKSVTTTIVIIDVMWIWNDFLLPLLMVNGSPDTKTLTLAAYTFVGQYTSDWQYAMTAMVMAVLPSIIVFIFLQKYIVKGVVAGAVKG
>NZ_CP048429.1|WP_062524495.1|4406439_4407330_-|sugar-ABC-transporter-permease
MLKTLGRRWREKLDFGLFTLPVLICIAVAFYIPFVMTIRYSMTKWNGISKHPKFVGLDNFQQIFTGDSNFANSAWFTIKYALLYIVIVNVLAILLAVLLDMKLKSTSWLRAAFFIPYILSLVIVGFIWKFIFMQGFNSLGESTGWSFFGLSWLGTPGLAFISILGVSIWQSIGFYLVIYIAGLQSVPDDLKEAATVDGAGAMRRFFSITLPLLAPSITISVFMALTNSIKVFDVILSLTGGGPGGTTYSIAYDIYRDTFQNNLYGYGTAKALILFVAVLVVTIIQLTVFKRREVEA
>NZ_CP048429.1|WP_143013456.1|4407516_4409382_+|histidine-kinase
MIKRTLYKLFEPVLERISRRLANKLILLFTIIIILVVTSLTFISYGMLRKESVNSSISSTRSNLLLVGRNLESYLDGIGQLSLPQISYDEFNYAILHESEDYGSKMYVEDYLKNLYFSRSDLEAIYLYVIKEHKYYYVTKENYNITVRVVEHPPIENLPWYKRALASPFNRSYQSLLKERTPEESQGDYPINSDKSFMGYHRLLRSIVTREPQAVLSLYFNNSVTNEIMKDIPFSEGEHLMYISPDNEPFAVDDREFYLQSEQAGLLQQLTPAQGGRLTWSDNEQKYLVMYDISQKEGWKLVKPIPYKQIYEAATTTRKLSYSIGLLFLIVSVILVSFISNRITNPLKNLSLQMKRFSTGSFDAEAAVEGNDEIAYLSRHFNKMVEKTNELINERYKMKIVEKNAVLKALEAEINPHFLYNALQAISTKALKNDNDDIVEMVDNLALTLRYCISGRDVVQAREELKHIERYLALQKARFGSRMQVEYDWNESLLELRIPKLSIQTLVENCIKHALEKVSNTVTIRIEAHITPAHSVISVLDDGPGITEKRLQQVLSSLQIQWEDRGGEGTEEGDNESIGLKNLNTRLKLLYGEEAALVIASDEHGTRMDMRLPRGGLGQHV
>NZ_CP048429.1|WP_062524491.1|4409374_4411021_+|response-regulator
MYKVLIIDDEEPLREAIHILGDWKGLGVDQVLEAIDGRMGLEMLRKHKIDLALVDMKMPELNGSQLLQIAEREFPDLLLIVISGYNDFEYTRQAIRSKVVDYLLKPVNRSDLNSALRKAVDVLEAKRKRESEFINRNITLNMSLPKLKEKMYLSIIERSFKNQSNEAFLPLIGADKPGNHFAVGVLRMLNLEQVRRDRFHEDRDLLHFAVTNVINENSGGHFEAFSFASPRSEREFIAIFTLKGSYGDDAAFLSLHHMKKTVSTLKELFGILCAGGLGQPYSDVTEIAQSYELAKAALDGTDLLSLKGSTVSNSGYTKSAVKDSPSLTGRMPLIRSSLESGNAGHAKSILSDFTRKWKSSEHFSLGEADRTVQEFIILLGDIALELDAVPERLRSGKSKGLRGLGISGDFASFGEFEAVLSSILDVYAGEISRSLAGDRSSVLENIKAYIDNHYFENIKISMFTDKYFLSREYLMKLFKGQYGYGIHEYVQKVRMDKAKELLSDPALKIQDISERLGYKDKNYFSKAFRNYYDCSPSEFRLQLTEGEK
>NZ_CP048429.1|WP_062524489.1|4411143_4412484_+|extracellular-solute-binding-protein
MKVKRIMALSASLLLAGGLLAGCGGNNGNNTANNAGETNEGANTATPATDSTKPVTINMFTASPEYTDAFNAYIAEYKKVKPNVTINLEIMQADYNTVLKSKIAAGSTPDVFQTTAGGDIDTFAEYSADLTNEPLAAAMTDAVRSNMTSSDGKVLGLPVKGNLFVLMYNKKLLADAGITEVPKTTAEMDDAITKLEAKGITPFANAYKEWWVWKHIFQHFVDAAATDAGIDAKTLVGNFIAGDTTIKDHPALYNNFFNFIDTTVKHGTDKPLERDSNAEVSDFALGKAAFMTGKGAWDEEAIKKITPDFDLGIAGYPVSDKPEQSQIITGADQALRINKDSAVAAQTIEFFNWLYTSEYGKNWFSTVAKVIPPIKDAPMPDLQMPKEMEEILKTEKSGDLSVNYSLDTFHQKFGELMQAYIGGSKTKDQAIDEIQKAWIQFGSAEQ
>NZ_CP048429.1|WP_062524488.1|4412832_4414929_+|alpha-galactosidase
MDSKRIEIAENGLYLTIEITGEQDVRLLHFGAAPLQDGIIAEKNKPGFRLLELQLTGEDRDEYHGRTHRASYPGLRMVYGGHSDSVNAFGRKLEISLVDPVTGITAEQHFQFYTGVQTVRCWTVLKNTGTGEAAVEYVSTFALTGVDKEGSGGRNGKIEVTLAHSGWQSELQWRTYRLPELGMSHLADRGSKRIAASNTGSWSAAELLPMAVLHNKESGTSLFWQIEHNGSWHWELTDQYDQLTLLVSGPTEHDNHWWLKLAPGEEFTSVPVAVGAVQGGFQGAAEQLTAYRRLIRRPNEDNELLRIIFNDYMNCLWGSPTTGKLLPLIDAAADVGCEYFCIDAGWYAPGEWWDGVGQWEPSAERFPEGIKYVLDYIRSKGMIPGLWLELEVMGINSPKLTETDDSWFFMRHGKRVKDRSRYQLDYRNPQVIAHADGVISRLVEQYGVGYIKMDYNINAGIGTETDADSFGDGLLQHNRAYLAWLDSIFARYPDLVIENCSSGGMRMDYAMLSRHSIQSTSDREDYVQYAAIAAGSPAALTPEQSAVWSYPLREGDDEEVIFNMVNALLLRVHQSGHLAELEPRRRELVKEALDYYKSIRVHIPQATAFWPLGLPDSEGEWVSFGLRHGDTRYLAVWRIAGEAAAVKLPIPELQGQAAEVSCAYPQQHHSEWSWNPSEGVLTVSIPQGKTARLFELHA
>NZ_CP048429.1|WP_039788503.1|4415439_4415697_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MMKATGIVRKVDELGRIVIPIELRRTMGIDIKDPLEIFVDGEKIILRKYEPTCIFSGSAENLINFKGKMVSKDVLDELIASFDRV
>NZ_CP048429.1|WP_062524486.1|4415889_4416606_+|HAD-hydrolase-like-protein
MQNTTEGLDHHMSTKLKKPEAIIFDMDGTLFQTESLLLPAYHKMFDILRAEGLYAGPTPPEERILSSLGMLLSQIWKNVMPDADEAVHRRADELLLQLEVEGLEAGGTLLYPKVTETLAALHERGVKLFVASNGLEDYIHSIVVVHELKELFDGLYSAGGQGTATKTELLRILLDEHGIKEAWMVGDRSSDVEAGKGNGQTVIGCAYAGFGRQDELKGSDVIISSFEELIGLYDNSTV
>NZ_CP048429.1|WP_062524860.1|4416867_4417992_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKEESGYIVSAAAPPIYETAPFFFNSYDHYTEAANDEKTHYVYSRGKNPTVQIVEEMLAGLERGGACKCFASGMAAVSAALMSSLAAGDHIILVGHIYETTVSLIKYLTKFNISYTIVHSTSVSSVAGALKPQTRVIFMESPTSFTFDIVNIPEITELAKSKGIRTIIDNSWATPLFLKPLEYGVDIVVHSASKYLGGHNDLVAGAVISSQHIMDRIYEEEYELIGGSLGPFEAWLLIRGLRTLPLRMDAHQKNGLAVARFLSEHPAVSKVNHPGLPSHPQHELASTQFKGYSGLFSFELKDSGYEEIRQMVNKLQLIRIGVSWGSAESQIISPNYGYNQQDLKKQHMPESLIRLAVGHEPAELLIQDLNNALS

Crispr_ID: NZ_CP048429_29

• CRISPR_ID: NZ_CP048429_29
• CRISPR_location: 4490822-4490897
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_29

Consensus_repeat	Method
TATGTTGGAAAAAGTACCACTAATT	CRISPRCasFinder

spacers of NZ_CP048429_29

>29.1|4490847|26|NZ_CP048429|CRISPRCasFinder
GAACTCGTTTAGCTTATGGAAGTTCC

CRISPR arrays and Neighbor proteins around NZ_CP048429_29

CRISPR arrays

The CRISPR arrays of NZ_CP048429_29

>merge|NZ_CP048429|29|4490822-4490897|CRISPRCasFinder
TATGTTGGAAAAAGTACCACTAATTGAACTCGTTTAGCTTATGGAAGTTCCTATGTTGGAAAAAGTACCACTAATT

>NZ_CP048429|29|25|4490822-4490897|CRISPRCasFinder
TATGTTGGAAAAAGTACCACTAATT	GAACTCGTTTAGCTTATGGAAGTTCC
TATGTTGGAAAAAGTACCACTAATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062526278.1|4484764_4485367_+|thiamine-phosphate-synthase	unknown	unknown	gnl|CDD|181086
NZ_CP048429.1|WP_062526306.1|4504493_4505090_+|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NZ_CP048429.1|WP_062526313.1|4505086_4505650_+|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl|CDD|381617
NZ_CP048429.1|WP_062526304.1|4503728_4504484_+|hypothetical-protein	unknown	unknown	gnl|CDD|274321
NZ_CP048429.1|WP_062526275.1|4482405_4482831_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062526286.1|4491405_4494423_+|alpha-amylase	unknown	unknown	gnl|CDD|200459
NZ_CP048429.1|WP_020427951.1|4497674_4498430_+|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224042
NZ_CP048429.1|WP_060860332.1|4498497_4499157_+|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|273990
NZ_CP048429.1|WP_062526297.1|4502694_4503537_+|DNA-formamidopyrimidine-glycosylase	unknown	unknown	gnl|CDD|234899
NZ_CP048429.1|WP_062526288.1|4494687_4496481_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|380161
NZ_CP048429.1|WP_025707058.1|4485444_4485648_+|sulfur-carrier-protein-ThiS	unknown	unknown	gnl|CDD|169065
NZ_CP048429.1|WP_025708182.1|4496718_4497447_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP048429.1|WP_062526277.1|4484389_4484746_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_025707783.1|4483077_4483947_+|glucose-1-dehydrogenase	unknown	unknown	gnl|CDD|235853
NZ_CP048429.1|WP_025706710.1|4486550_4487663_+|2-iminoacetate-synthase-ThiH	unknown	unknown	gnl|CDD|236425
NZ_CP048429.1|WP_082722781.1|4488140_4488776_-|5'-deoxynucleotidase	unknown	unknown	gnl|CDD|378993
NZ_CP048429.1|WP_062526280.1|4485755_4486520_+|thiazole-synthase	unknown	unknown	gnl|CDD|234687
NZ_CP048429.1|WP_074647550.1|4499970_4502643_+|DNA-polymerase-I	unknown	unknown	gnl|CDD|235591
NZ_CP048429.1|WP_062526284.1|4488879_4490547_+|fumarate-hydratase	unknown	unknown	gnl|CDD|377546
NZ_CP048429.1|WP_062526273.1|4481342_4482284_+|malate-dehydrogenase	unknown	unknown	gnl|CDD|180477

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062526278.1|4484764_4485367_+|thiamine-phosphate-synthase	gnl|CDD|181086	PRK07695, PRK07695, thiazole tautomerase TenI.	2.8002e-78
NZ_CP048429.1|WP_062526306.1|4504493_4505090_+|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	4.76571e-90
NZ_CP048429.1|WP_062526304.1|4503728_4504484_+|hypothetical-protein	gnl|CDD|274321	TIGR02840, conserved_hypothetical_protein, putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein. [Cellular processes, Sporulation and germination].	4.08086e-58
NZ_CP048429.1|WP_082722781.1|4488140_4488776_-|5'-deoxynucleotidase	gnl|CDD|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	4.05984e-89
NZ_CP048429.1|WP_062526288.1|4494687_4496481_+|HAMP-domain-containing-protein	gnl|CDD|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp|Q2G2U4.1|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	1.9532e-106
NZ_CP048429.1|WP_020427951.1|4497674_4498430_+|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	6.2791e-172
NZ_CP048429.1|WP_060860332.1|4498497_4499157_+|phosphate-signaling-complex-protein-PhoU	gnl|CDD|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	2.24182e-57
NZ_CP048429.1|WP_062526297.1|4502694_4503537_+|DNA-formamidopyrimidine-glycosylase	gnl|CDD|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	3.72755e-148
NZ_CP048429.1|WP_025707058.1|4485444_4485648_+|sulfur-carrier-protein-ThiS	gnl|CDD|169065	PRK07696, PRK07696, thiamine biosynthesis protein ThiS.	8.79427e-24
NZ_CP048429.1|WP_025708182.1|4496718_4497447_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.02558e-85
NZ_CP048429.1|WP_062526313.1|4505086_4505650_+|lytic-transglycosylase-domain-containing-protein	gnl|CDD|381617	cd16896, LT_Slt70-like, uncharacterized lytic transglycosylase subfamily with similarity to Slt70. Uncharacterized lytic transglycosylase (LT) with a conserved sequence pattern suggesting similarity to the Slt70, a 70kda soluble lytic transglycosylase which also has an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	1.94741e-72
NZ_CP048429.1|WP_025707783.1|4483077_4483947_+|glucose-1-dehydrogenase	gnl|CDD|235853	PRK06701, PRK06701, short chain dehydrogenase; Provisional.	0
NZ_CP048429.1|WP_025706710.1|4486550_4487663_+|2-iminoacetate-synthase-ThiH	gnl|CDD|236425	PRK09240, thiH, 2-iminoacetate synthase ThiH.	0
NZ_CP048429.1|WP_062526286.1|4491405_4494423_+|alpha-amylase	gnl|CDD|200459	cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins. Enzymes such as amylases, cyclomaltodextrinase (CDase), and cyclodextrin glycosyltransferase (CGTase) degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs), consisting of six, seven, or eight glucose residues, respectively. CGTases are characterized depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The maltogenic alpha-amylase from Bacillus is a five-domain structure, unlike most alpha-amylases, but similar to that of cyclodextrin glycosyltransferase. In addition to the A, B, and C domains, they have a domain D and a starch-binding domain E. Maltogenic amylase is an endo-acting amylase that has activity on cyclodextrins, terminally modified linear maltodextrins, and amylose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	6.14759e-157
NZ_CP048429.1|WP_062526280.1|4485755_4486520_+|thiazole-synthase	gnl|CDD|234687	PRK00208, thiG, thiazole synthase; Reviewed.	3.29419e-143
NZ_CP048429.1|WP_074647550.1|4499970_4502643_+|DNA-polymerase-I	gnl|CDD|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_CP048429.1|WP_062526284.1|4488879_4490547_+|fumarate-hydratase	gnl|CDD|377546	pfam05681, Fumerase, Fumarate hydratase (Fumerase). This family consists of several bacterial fumarate hydratase proteins FumA and FumB. Fumarase, or fumarate hydratase (EC 4.2.1.2), is a component of the citric acid cycle. In facultative anaerobes such as Escherichia coli, fumarase also engages in the reductive pathway from oxaloacetate to succinate during anaerobic growth. Three fumarases, FumA, FumB, and FumC, have been reported in E. coli. fumA and fumB genes are homologous and encode products of identical sizes which form thermolabile dimers of Mr 120,000. FumA and FumB are class I enzymes and are members of the iron-dependent hydrolases, which include aconitase and malate hydratase. The active FumA contains a 4Fe-4S centre, and it can be inactivated upon oxidation to give a 3Fe-4S centre.	1.32663e-93
NZ_CP048429.1|WP_062526273.1|4481342_4482284_+|malate-dehydrogenase	gnl|CDD|180477	PRK06223, PRK06223, malate dehydrogenase; Reviewed.	0

Protein sequences

>NZ_CP048429.1|WP_062526284.1|4488879_4490547_+|fumarate-hydratase
MQHFEDSVYDLIVETSTNLPGDVRRAVAKGRALEDRATRSGLALTTIAQNIGMAELQVSPICQDTGMPTFIIHTPVGVNQIEMKKDIHNAIIRATKNGKLRPNSVDSLTGENSGDNLGAGTPVIHFEQWEEAGVDVRLILKGGGCENKNIQYSLPAELEGLGKAGRDLDGIRKCILHSVYQAQGQGCSAGFIGVGIGGDRTTGYELAKKQLFRKVEDVNPNENLAKLEEYIMENANKLGIGTMGFGGEVTLLGCKIGVMNRLPASFFVSVAYNCWAFRRQGILVDPATGHIQEWLYESGTGISVGAEDSTAPVLETVGAAAEGADCGVISGDAVISAAPAVLSAAEAEAKLAGKPAEAAAGEAREVRLTTPISEEDIRSLRVGDVVILSGEMHTGRDALHKYLMDHDAPVDLNGAVIYHCGPVMLKDEEGWHVKAAGPTTSIREEPYQGDIINKFGIRAVIGKGGMGPKTLKALQEHGGVYLNAIGGAAQYYAECIKKVNSVDFMEFGIPEAMWHLQVDGFAAIVTMDAHGNSLHADVEKDSAAKLAQFREPVFK
>NZ_CP048429.1|WP_082722781.1|4488140_4488776_-|5'-deoxynucleotidase
MNYHFSAYLYRLQYIQRWSLMRSTAPENVAQHSFQVALLSHMLCSIGNVHFARSLNADRAAAMALFHDATEVFTGDIATPVKHNNPQLLSSFRDMERIAAERLKGMIPPELTSVYAPLLQPQDSPAGSEDAYLLRYVKAADHLDAYLKCVWEVAAREFAAAKAQTAAKLRGLEMPEMEYFLAHMAPGFELSLDELSAGTDGGQALEGGDTT
>NZ_CP048429.1|WP_025706710.1|4486550_4487663_+|2-iminoacetate-synthase-ThiH
MSFYETLTRLEQLPYESLWQQFQVEDVKRALCKDRLDESDLLALLSPAAEPCLEEIAQRAQRLTRTHFGHVMQLFTPMYLADFCVNHCTYCSFSSIYDFPRKKLTPEEVRQEAIAISSTGLRHLLVLTGESRSDSPASYVKECVEILHEYFPSVSIEVNPLSTEEYRELREAGVDGLTLYQEVYHQETYRKLHVKGPKRVFRNRLDAPERGCQAGFRSVNIGALLGMYDWRQEAFMTAMHARYLQDKYPECEIGLSAPRFRPYLGEFNPDSDVTDRALVQIILAYRLFLPRSGITLSTREPASLRNHLIHLGITKMSAGVSTEVGGHTQDGGTPQFEISDERSVEEITDMLQANGLQPVFKDWDLLRLQA
>NZ_CP048429.1|WP_062526280.1|4485755_4486520_+|thiazole-synthase
MLDPFVIGGITLSSRLFIGTGKYSRNTLIPEVVASSGSQVITVALRRIDPESRDNIVSHIPPHMTLLPNTSGARTAEEAVRIARLARAAGLGNWVKIEVINDQKYLLPDNLETIRATEILAAEGFVVLPYMSPDLSAAIRMKEAGAAAVMPLGSPIGSNRGLRTKELLRILISEVELPVIVDAGIGRPSEAAEAMELGASAVLLNTAIATARDPLLMAEAFREAVSSGRKAYLAGLGPVEETAVASSPLTGFLK
>NZ_CP048429.1|WP_025707058.1|4485444_4485648_+|sulfur-carrier-protein-ThiS
MNLIINGKALEIAEDCRTVADLLSRPEWSGRLVIVERNGEIVNREHYGETSFCEGDRLELVHFVGGG
>NZ_CP048429.1|WP_062526278.1|4484764_4485367_+|thiamine-phosphate-synthase
MAEIHLISDGRLAPGQFINLAAAVYPLVDYIHLREKHRSALELLDMAKQLLLAGVPASSLVINDRLDVALAAGAGAVQLAWNSLPPAAARAAAPGLRLGRSVHSAAEAAEAGLQGADYCLFGHVFPTACKPGQQERGLGPLGEAVRCSRIPLIAIGGIEPGNAGQVIRQGAAGIAVMSGICGAGDAVSAARAYRLAVQEA
>NZ_CP048429.1|WP_062526277.1|4484389_4484746_+|hypothetical-protein
MDLNAGWPGKNGRNAFVEELTAGLSGKNGRNAFVEELTAGLPGKNGRNAFVEGSTAGLSGKNGRNAFVEGAKAGLPGKNGRNAFVEGPKAGLPGKNGRNAFVEGSKAGLFCSRSAQRI
>NZ_CP048429.1|WP_025707783.1|4483077_4483947_+|glucose-1-dehydrogenase
MPDNKQSTKTLPPQVQDRQPGIESEMKPRPEFETSSYKAAGKLLGKAALITGGDSGIGRAVAVHFAKEGADVVISYLNEHSDAEETKRQVEQEGRKCILVAGDIGVEAFCQDLINKTVEGLGKLDILINNAAEQHPQDKIEDITSEQLERTFRTNIFSMFYLTKAAMPHLKKGSTIINTTSITAYRGSPQLLDYSSTKGAILSFTRSLSMNLAEKGIRVNAVAPGPIWTPLIPSTFDAKKVSEFGGTQPMKRPGQPEELAPAYVYLASDDSSYVSGQVMHVNGGEVVNG
>NZ_CP048429.1|WP_062526275.1|4482405_4482831_+|hypothetical-protein
MDRIFFFLHMIGTLALGFYLVLPFILSGTAKLSASAKEGTLSAIGGFNRFAQYGLVIQLLTGGYMISQGDYTVAWMVVVVVLLLAMFALGGIMGKPLRLAAAGMRENRDVSDHTAKLRTLSLLLMALLIVMMFFMVYRHII
>NZ_CP048429.1|WP_062526273.1|4481342_4482284_+|malate-dehydrogenase
MAIKRNKITVVGAGFTGSTTALMLAQKELGNVVLLDIPQLENPTKGKVLDMLEAGPVLKFDARITGTSSYGDAADSDIVIITAGIARKPGMSRDDLVNTNAGIVKSVCENVKRVAPEAIVIILSNPVDAMTYVAFRTLGFPKNRVIGQSGVLDTARYCTFIAEELNVSVEDVRGFVLGGHGDDMVPLVRYSSVGGIPIETLIPAERIAEIVQRTRVGGGEIVSLLGNGSAYYAPAASLVQMTEAVLKDKKRILPVIALLEGEYGYDGLFMGIPALLGADGIEKIFELELTAEEKAALDKSADSVRAVTSVVTV
>NZ_CP048429.1|WP_062526286.1|4491405_4494423_+|alpha-amylase
MKRKLWLIPALITSIVLSITANLFVLPPTQVEAASIGTVTENDTIYQIMVDRFNDGDTSNNATGAAIRYGETSEEDFRYMKGGDWQGVIDKLPYIHNMGYTAIWISPVAEPQVTSRDNNGTGKNTAYHGYNVKNPNAANPYFGTKEKLKELVDSAHALGIKVIIDVVPNHIGDYMLGNQAYYDIPGLQPAEPFNNPAWYHHNGDINWSLVDGRYDQWAQDYMENHDLGGLDDIDLDVPAAKQAIFNSIKGWFDYTGADGARVDAAKLIKPTDIGELQNLLGVNTFGENFDGNAEFVSRWVGPNKEWGMLDFPLFFSVLNSFAYGQSFESNIKSTLAQDSYYNGNANHMVTFIDNHDRNRFLTEAGGNVDKMQNALSFIFTVRGTPVVFQGTEQNKGNGNGQIMTGGIADTWNRWSMVKRDASGQVLENYFNENASTYKHIAKLNEIRKNNPALRTGTQREMWSAQNLYAFSRRIDSGTNVGQEVISVFSNASGGSQTVTIPLRAESSLTPGTVLINQLNTSDKVTVQSGGTTGKQITVTVGANSAKIYSKTQPVADTVAPSVPSNVTATVQNASSVLVNWTASTDAVGVTGYEIYRNGVKVGTSATTSYTDNTVASQTNYSYTVKAFDAAGNLSALSAAALVTTPAGNNVTIYYKQGYTTPYIHYRPVGGTWTTAPGVVMPTAEVSGYNKITINIGSATQLEAAFNNGSGTWDSNGGSNYLFGTGTWTYTPTGNIKSGGPVAPTATPTPTVTPTATATPTPTVTPTATPTPTPTVTPTATPTATPTATPTATPTVTPTATPTATPVGNSVTIYYKNTAFTNSYIHYKLDGSTEWTTSPGVQMQTSSFSGYKAATIELGSAAGLTAAFNNGSGTWDNNGSSNYHFGTGAWSLVNGSIAAGEPQGDSVTFRVSVPGTTPANDPLYLTGSFNSWNAADPAYLLTKGSDGVYSVTLSLPAGTAVQYKITRGSWATVETSSSGADIANRTLTPAGGAQTVNLTVQRWKDQ
>NZ_CP048429.1|WP_062526288.1|4494687_4496481_+|HAMP-domain-containing-protein
MRPFRIRLTFILMALIGISMIGAGITMAKLFKDSHISALEENMSREIKLLSGTFQFTDTDSPGAVSYYTEQAEHIAKLTNSRITFITKDGKVIGDSEKNPLEMDNHSTREEEVLAAKEGIGRAIRYSDTLNREMLYVAGAVVSDQGFDGYIRLSMALDAVTEGLNRAWMIMAGGLVLLFIAATFVSYKVASSMTSPLEQITRVARRITDLDYDARVPMNRRDEIGQLATAINAMADSLQAQLKTIRDNEDLLQSVLDNMTGGIVMINAEGEIALLNRAAERLLDVKNSEMAGHSFKELKHHYELTRLIEEGVSRNEAVHEERSIYNPTERIVRLDGVPMIQDGSNRGMLFLLQEVTEIRRLEKMRSEFVANVSHELKTPVAAVKGFAETLLGGGVKDEKTARSFLQIIYDENERLNRLIGDILELSKIESKRAQLECSPVHLIEFFDSLLETLSKVAEKKNISLNATVPEELFMEGDEDKLRQIFINLISNAINYTQDGGSVNVNVVNGQKADGTETVIFTVRDTGMGIPRKDLPRIFERFYRVDKARSRSSGGTGLGLSIVKHLVELHHGSISVESDLGIGSSFILELPLLQEGSH
>NZ_CP048429.1|WP_025708182.1|4496718_4497447_+|response-regulator-transcription-factor
MAQRLLVIEDEPTLSRLLSYNLTQEGYEVTVEDHGTAGYDRAAREPFDLIVLDLMLPGMNGIDILDKLRGQGIRTPVIVLTAKNAEEDVVRGLKSGADDYITKPFGVSELLARVSAVLRRISGLAEEVQPETAVSASTIILGQLEIYPERYEVSLGGQSINLRPKEFEVLLYLARKPGVVLTRDDLMNAVWGFDYIGGQRTVDVHVSSLRKKLELDPESVHIDSIRGVGYKLVVNKKRTPVI
>NZ_CP048429.1|WP_020427951.1|4497674_4498430_+|phosphate-ABC-transporter-ATP-binding-protein
MKSIIDIEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGTRIEGKVNIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIRGKAELDVLVEQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPVSTLKIEELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFSNPKDSRTEDYISGRFG
>NZ_CP048429.1|WP_060860332.1|4498497_4499157_+|phosphate-signaling-complex-protein-PhoU
MIRRKEFDKDLEELRSLLQQMGEHVTDALEGAILALQTLDTARAQEIVKADLRLNAMEDRIMEIGSRLIITQQPVAKDLRRIIVAFKISSDLERMGDLALDVAKVTMRVQGQQLIKPLVDIPRMAEVVTGMITEAIQSYLDENTDLAYKMAQDDDQVDHLYSGMINELYAFMVEKPESLNQAMLLTLVGRYIERIADHATNIGESVVYLVTGKRPDLNQ
>NZ_CP048429.1|WP_074647550.1|4499970_4502643_+|DNA-polymerase-I
MDKLILIDGNNIIYRAFFAMPPLTNTAGQQTNAVYGFTTMLLRLIEEHKPTHMIVAFDAGKITFRHEGYEDYKGGRQKTPPELSEQFPMLKELLRNLGVPQFEIDGYEADDIIGSISREADEAGRQVMIVSGDKDMLQLASEHTTVALVRKGVTEVEMYGPQQIRDKYDLTPQQIIDLKGLMGDASDNIPGVPGVGEKTALKLLQQFGSVEGVLAGTDELKGKMKEKLEEHADSAIMSKKLATIYREVPLEHAWEDMVFTGIRSDTAGPALAKLEFKSLLERLSLSAYAPSGGNSDEGAEAVEAAVLDITIVREAELPDLIAALPGISALHVESNGENPHRAEVIGIGLSSPERHYFVPFELLKRPAAAKLRDWLGDEKAPKSGYDLHRADLALHWQGIAFAGAANDVQLAAYLLDPTEANQNLYDLTAKYGLPRLSPDEEVFGKGAKYKIPELEILGNHIARKSAAVLGIVQKQQQELTDTDMTGLFVDLEMPLSRILADMEKQGIAVNKEDLIDLGKEFEAQISKLVADIYAICGTEFNLNSPKQLGEILFVKLGLPVVKKTKTGYSTDAEVLEKLAPYHDAVRLILQYRTIAKLQSTYVEGLLKEISPDTGKVHTFYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKIFVPSEPGWSILAADYSQIELRVLAHISGDERMKEAFVEDMDIHTKTAMDVFGVSADQVDSNMRRSAKAVNFGIVYGISDYGLSQNLNISRKEASQFIEQYFEVFKGVRRYMDEIVVEARKQGYVTTLLERRRYLPEINAKNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDKALYERGLRSRMLLQVHDELVFEVPEDELELMKTLLPEVMAGALKLSVPLKAEVSYGSNWYEAK
>NZ_CP048429.1|WP_062526297.1|4502694_4503537_+|DNA-formamidopyrimidine-glycosylase
MPELPEVETVKRTLNALITGKQIQNVTVRLPRIIQRPDDIQAFANMLAGHTVVQVERRGKFLRFVLDGLVMVSHLRMEGRYGLYPGGEPLDKHTHVIFHFTDGTELRYTDVRQFGTMHLFQPGEDLLLPPLKKLGEEPLAPSFTPERFKEIVSGKSTKIKPLLLNQEYVVGIGNIYVDEALHRARIHPETGAKALTGSQLDVLHHAIVATLTEAVNAGGSSVKSYVNGQGESGSYQHQLLIYGRKDQPCASCGTLIEKTVVGGRGTHYCPSCQPQAGIRK
>NZ_CP048429.1|WP_062526304.1|4503728_4504484_+|hypothetical-protein
MLSPFFSLLLLAFALSLDGFGVGITYGLRKMKIPLLSILIISLCSGIVIYVSMQVGVLLAKVVSPHAASSIGAVILVLMGCWSLFQMLTQKEKEHDGESPGAEHGRADHEARLETAAASSGSAAAAELPRAEEGESPKSAVFSLELRHLGVVIQILRTPSSADMDASGSISSAEAMVLGIALSLDAFGAGLGAALLGFSPVSTSLMIALFSGTFLLLGMKTGLKLSGSYWMKHAAALPALLLIAMGIMKLL
>NZ_CP048429.1|WP_062526306.1|4504493_4505090_+|dephospho-CoA-kinase
MIMGLTGGIASGKSTVSAMFVDKGAVLVDADVIAREVMLPGHPVLAAAVQQFGEGILLPDGTLNRARLGEIVFNHSEARQKLNDLTHPAIRREIKNRMYALEQEDPERLTLVDIPLLYESELDNLFQEIIVVYVPRELQLARLMERSGLTHEQAEGRLQAQMDIELKRSRANYIIDNSRDLAYAKQQVDVLWDRLGLL
>NZ_CP048429.1|WP_062526313.1|4505086_4505650_+|lytic-transglycosylase-domain-containing-protein
MKWLRKKRVLLLLFIGFTAVLFLSTNWMSWFYPIYYKNEIRKHSTTYEIDPFLVAAIIRVETNFKTGRESKKGALGLMQLMPDTAKWALEKAKLPDVSLERLKEEPSANIELGTWYLSSLSRKFEGNRIAVIAAYNAGPGKVQRWLDEGDWDGTEAAVKNIPIGETRHYVQRVIYYYDQYSEIYNEF

Crispr_ID: NZ_CP048429_30

• CRISPR_ID: NZ_CP048429_30
• CRISPR_location: 5344173-5344246
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_30

Consensus_repeat	Method
AATTAGTTACCCTTTTTCCACTT	CRISPRCasFinder

spacers of NZ_CP048429_30

>30.1|5344196|28|NZ_CP048429|CRISPRCasFinder
AACCTGCGGAGAACAAGGGAATCGGGCA

CRISPR arrays and Neighbor proteins around NZ_CP048429_30

CRISPR arrays

The CRISPR arrays of NZ_CP048429_30

>merge|NZ_CP048429|30|5344173-5344246|CRISPRCasFinder
AATTAGTTACCCTTTTTCCACTTAACCTGCGGAGAACAAGGGAATCGGGCAAATCAGTTACCCTTTTTCCACTT

>NZ_CP048429|30|26|5344173-5344246|CRISPRCasFinder
AATTAGTTACCCTTTTTCCACTT	AACCTGCGGAGAACAAGGGAATCGGGCA
AATCAGTTACCCTTTTTCCACTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062528033.1|5342283_5342691_+|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133398
NZ_CP048429.1|WP_062528027.1|5338851_5339832_+|MoxR-family-ATPase	unknown	unknown	gnl|CDD|223786
NZ_CP048429.1|WP_062528050.1|5356912_5358340_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP048429.1|WP_062528044.1|5351008_5352397_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223650
NZ_CP048429.1|WP_062528039.1|5346631_5347474_+|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197666
NZ_CP048429.1|WP_062528046.1|5352427_5353516_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NZ_CP048429.1|WP_062528550.1|5350296_5351022_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP048429.1|WP_062528031.1|5340920_5342249_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062528020.1|5333660_5333867_-|DUF1657-domain-containing-protein	unknown	unknown	gnl|CDD|377932
NZ_CP048429.1|WP_020434164.1|5355129_5355633_+|ferritin	unknown	unknown	gnl|CDD|153113
NZ_CP048429.1|WP_062528037.1|5344415_5346470_-|beta-galactosidase	unknown	unknown	gnl|CDD|367090
NZ_CP048429.1|WP_062528029.1|5339835_5340924_+|DUF58-domain-containing-protein	unknown	unknown	gnl|CDD|376643
NZ_CP048429.1|WP_062528549.1|5336111_5337230_+|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062528022.1|5334038_5334899_+|DUF421-domain-containing-protein	unknown	unknown	gnl|CDD|225205
NZ_CP048429.1|WP_062528048.1|5355887_5356751_+|cation-transporter	unknown	unknown	gnl|CDD|223131
NZ_CP048429.1|WP_163704409.1|5331362_5333555_+|hypothetical-protein	unknown	unknown	gnl|CDD|369381
NZ_CP048429.1|WP_062528035.1|5342804_5343725_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|369561
NZ_CP048429.1|WP_062528042.1|5347594_5350255_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062528024.1|5337378_5338359_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381305
NZ_CP048429.1|WP_074647750.1|5353611_5354934_-|beta-N-acetylhexosaminidase	unknown	unknown	gnl|CDD|224389

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062528033.1|5342283_5342691_+|MerR-family-transcriptional-regulator	gnl|CDD|133398	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators. Helix-turn-helix (HTH) heavy metal resistance transcription regulators (HMRTR): MerR1 (mercury), CueR (copper), CadR (cadmium), PbrR (lead), ZntR (zinc), and other related proteins. These transcription regulators mediate responses to heavy metal stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.0908e-29
NZ_CP048429.1|WP_062528027.1|5338851_5339832_+|MoxR-family-ATPase	gnl|CDD|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.01603e-91
NZ_CP048429.1|WP_062528050.1|5356912_5358340_+|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.47079e-41
NZ_CP048429.1|WP_062528044.1|5351008_5352397_+|ABC-transporter-permease	gnl|CDD|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	8.96655e-20
NZ_CP048429.1|WP_062528039.1|5346631_5347474_+|AraC-family-transcriptional-regulator	gnl|CDD|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	5.33785e-28
NZ_CP048429.1|WP_062528046.1|5352427_5353516_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.80444e-23
NZ_CP048429.1|WP_062528550.1|5350296_5351022_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.43651e-110
NZ_CP048429.1|WP_062528020.1|5333660_5333867_-|DUF1657-domain-containing-protein	gnl|CDD|377932	pfam07870, DUF1657, Protein of unknown function (DUF1657). This domain appears to be restricted to the Bacillales.	1.64573e-12
NZ_CP048429.1|WP_020434164.1|5355129_5355633_+|ferritin	gnl|CDD|153113	cd01055, Nonheme_Ferritin, nonheme-containing ferritins. Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.	1.32477e-71
NZ_CP048429.1|WP_062528037.1|5344415_5346470_-|beta-galactosidase	gnl|CDD|367090	pfam02449, Glyco_hydro_42, Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.	1.0172e-147
NZ_CP048429.1|WP_062528029.1|5339835_5340924_+|DUF58-domain-containing-protein	gnl|CDD|376643	pfam01882, DUF58, Protein of unknown function DUF58. This family of prokaryotic proteins have no known function. Caldicellulosiruptor saccharolyticus PepX, a protein of unknown function in the family, has been misannotated as alpha-dextrin 6-glucanohydrolase.	8.1321e-18
NZ_CP048429.1|WP_062528024.1|5337378_5338359_+|aldo/keto-reductase	gnl|CDD|381305	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins. Escherichia coli YajO is the prototype of this family. It is an uncharacterized aldo/keto reductase family oxidoreductase.	0
NZ_CP048429.1|WP_062528022.1|5334038_5334899_+|DUF421-domain-containing-protein	gnl|CDD|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	8.86206e-67
NZ_CP048429.1|WP_062528048.1|5355887_5356751_+|cation-transporter	gnl|CDD|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.36284e-101
NZ_CP048429.1|WP_163704409.1|5331362_5333555_+|hypothetical-protein	gnl|CDD|369381	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.	9.54966e-53
NZ_CP048429.1|WP_062528035.1|5342804_5343725_+|alpha/beta-hydrolase	gnl|CDD|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.684e-59
NZ_CP048429.1|WP_074647750.1|5353611_5354934_-|beta-N-acetylhexosaminidase	gnl|CDD|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	3.55051e-90

Protein sequences

>NZ_CP048429.1|WP_062528035.1|5342804_5343725_+|alpha/beta-hydrolase
MMPSSMEMLNAIKNHLKQNNQTAGKTAVQIRLELAESAKQLPQLPGISAEKAEMPGLQGEWVDASKDHNSEDRRKVILYFHGGGFISGGCEIYRDLAARISAASGVPVLTVEYRLAPEHVYPAANDDCYAAYCRLLETGLQPEDIILGGDSVGATLALMTLITLRDSGGKLPAAAFLLSPHGDLVHLDGDSYDSKAELDPTGSREGNQRILRDYLGGYAGELPALLSPLKLSLRGLPPLLIQAGDQEVLLSDAEKLAERIRAEGGEVTLEIWENMWSVFQMMSAVLPEAQEAIGDIGSFVRKTWKL
>NZ_CP048429.1|WP_062528033.1|5342283_5342691_+|MerR-family-transcriptional-regulator
MVTYLRGELAKEANVNIETLRYYEKHELLPQPQRTASGYRVYTEETLTRIIFIQNAKNCGFTLREIKKALKKSEGGNLSIPDFIMAIERKMTAVDLEIAKREKTRLLLGDLKRNLESAERHPGVQETLQILKMED
>NZ_CP048429.1|WP_062528031.1|5340920_5342249_+|hypothetical-protein
MNALASGSLITALRLWLSCIVEWLLFLPVWIVLQKYLQSGDALLPWIYTLPLVSMTGALLRQKCNRKWKQLLAALILGAVAGVLAGAFSLKEIPLFAGAAICAYLGTTAAGRDNRIRFYVAGMAVYFAATIAFARIPLLQPSVAGLTWSGSLCLILALLDSNTSHLRYSSFSGAGSPLPAGLRRHNRLFVLLFIAVAAALAAGAGKALGMLIWHAAQAFFGWLGRLFSGSGETEPPEAPPPVMPEMPAAETQEPGLLSMLLDYAFYALGAAVLAVVLYYGLRWLYRNTGGLWRRFIDSLLSLLRREAIQNNTAYRDEEKSIFTWEKTVQGVRDYWRNRLAYPSRRDRWDGMNGGRERTRWLYRHWLNAKRAEGYLQRNYLTPQETMADIAEWNAGRKRQRKNEAASAAAASAELLHFYNQARYGEAELSESEVLRLKEKLKL
>NZ_CP048429.1|WP_062528029.1|5339835_5340924_+|DUF58-domain-containing-protein
MTLPWFIISTLLLMMFISAIYQRNALKKVNYIRYFSAQVAFEGETVEMVEEISNGKLLPLPWLRLESSIARGLEFGSQENLGISSGEIYQNHMSLFYLRPYRHIKRTHRVRCEKRGLFRLDTATMTTGDLFGLSRNTQTIPLQLELMVYPLMVDMYELPLPIHSWLGELPVKRWIVHDPFLTAGTREYSPGDSLGSINWKATARTGQMQVHRKDYTADSRLMICLNMEISDSMWRTVTDMERIELGIRYAATIAGYAAGHGIETGFLSNGRLDGESEHEPVNAEPMGRLEDFLSLLARLSLERVLPMSRLLELEAESGSTDTDYLIISCHRGAELQQAAEQLRLSGNGVEWLDIPGEVRDSA
>NZ_CP048429.1|WP_062528027.1|5338851_5339832_+|MoxR-family-ATPase
MMLQEAAALIQAIRENLAKVIVGKAEGVDLLLTALLANGHVLLEDVPGTGKTMLAKTLARSLDCSFKRIQFTPDLLPSDLSGINFYNQKTGEFQFRPGPVFSSILLADEINRATPRTQSSLLECMEERQITIDGITHTLDAPFLVIATQNPVDSQGTFPLPEAQLDRFLMRITTGYPTFEEGVHILQRFRENNPLLETSAVATGSEIQELQRLAAAVAVSDDLLGYITAIVEATRQAPSVKLGASPRAGFALLRAAQGYALIRQRDYVLPDDIKAVAVPVLAHRLLLQRGPGSREGQAAELVQQVLREVEVPAEPAPAAARGGRVE
>NZ_CP048429.1|WP_062528024.1|5337378_5338359_+|aldo/keto-reductase
MEYVKLGSTGLEVSRICLGCMSYGIPERGNHSWTLNEEASRPFIQKALDLGINFFDTANVYSDGTSEEIVGRALKDFTTRDEVVIATKVHGTMRPGPNGGGLSRKAIMSEIDHSLKRLGTDYVDLYQIHRWDPATPIEETMEALHDVVKAGKARYIGASSMHAWQFLKALHAAERHGWTRFVSMQNYVNLLYREEEREMFPLCEAEGIGVIPWSPLARGRLTRDWDEASTRSTSDEFGKQLYAKTVEADRTVALRVKEIAEERRIPRAQVALAWVLQKKPVTAPIVGATKMAHLEDAAAAVSINLSPDEIKRLEESYIPHPVVGFS
>NZ_CP048429.1|WP_062528549.1|5336111_5337230_+|right-handed-parallel-beta-helix-repeat-containing-protein
MGSPTTLRSALTKIAAGGTIYMRGGTYSFSSPVTIERDNSGTSSSRKNIVAYGSEKPVLDFSGESFASTERGLQIFGHYWNVKGLEVKGAGDNGIFIGGNYNIIENVETHHNRDSGLQISRYASTATSMSDWPSYNQVIGVYSHDNFDPDNGEDADGFAAKLTIGPGNVFDKCISAWNTDDGWDLYTKTDTGPIGIVTIKNSVAYKNGQTSDGNTTTNSDGNGFKLGGDKIAVNHIVTNSVAFQNKKHGFTYNSNPGSIQLTNSTSWSNGQSNFAFDTGTHMFTNNLSFAGASSDKTSGTDVSSTNVWWKSNASANGKGLVVSSADFVSLTPSVVRNADGSFTLGNFLKLATGSDLIGSGTPSGTNIGATIQ
>NZ_CP048429.1|WP_062528022.1|5334038_5334899_+|DUF421-domain-containing-protein
MPEWLEVVWRTVFAVVVLFFLTKLLGKRQVSQLSFFEYITGITVGSLAAYISLDTDKTWHLGVIALVVWVAFSLGIEYLQIKSKKARDFIDFKSTVLIKDGKVLEDNMKKERLTTDELLAELRKKDVFKLADVEFAIMESDGAINVLLTRENQPLTPKHLGVKVAPEQETQAVIMDGEIMDEPLDALGLTRGWLQGKLEKLNLSPENVYLGQVDSYGELTVDLYTDSVEVPQTQEKPQLYALLKKCEADLELFSLSTSNEQAKKMYGQCSEQLQSLLKQLKPFVQS
>NZ_CP048429.1|WP_062528020.1|5333660_5333867_-|DUF1657-domain-containing-protein
MTVASQVKTCVSSLKSAQASLEQFAMETQNQEAKTLFTNAAQQTQQIVDQVQSRVTELENEEPQYKGF
>NZ_CP048429.1|WP_163704409.1|5331362_5333555_+|hypothetical-protein
MMKPYFDEQESIYSKLYDRTDEILETVANAYIGRNPALPLEFRSFSREGFLKKNNGRYDMNLEEKLPEAKPGQYAYVFGLLWSNHDGWTDFGVSCYGPTAVYLNREFLYKSDIHEEANPKVNKGIRAKLQKGWNSVCIKFVKTASGFGGIFGTLHTKWNPMEFMSPFQERKGQAGWIYSDAMDADCFSEEHIPEYTVLEEQSGMVWHPELSWDIEQMKLNPCTRIFGNMPHKVAYLWSELSHSSAGSKVCSLKGSSTGKLRVWLDGSEVFSGALKPSDMAEFKLEPGKHEVLVELCSPENGWEYGFDFIIDGENVALSIPRGVKGSCEPWLYLGPFDKQLEEPADSICSLYRLFEQGDSQYFWRVDRPDTWVRPYLDNALFAKWNYPLGVTLYGLLQTGRFLQKQGILDYAVNHITECTRIYKYAKWDAEQYGYPSVNNQLVEMDMLDDCGSFGSAVLEAYSDSQDPHTPYLVEQIANHMEYKQERLEDGAFFRICLNSFQENTLWADDLYMSTPFLIRYYRLTGEAKYLDDAARQFNRFKKYLFIPEFKIMSHVYDFKHNKPTNVPWGRGNGWVFFSLSELLEVMPETHVEREDLLTFYNELAEGYMALQGTSGLWHQVLTHPDSYEETSCTSMFVYGLSRGVRHGWIREDMKSKAVMAVNRGWEALTKYGIDRFGNVHGVCRGSGYSFTPEYYKVELNALTNDTHGIGIVLLAGIETGKLSKWLKQKN
>NZ_CP048429.1|WP_062528037.1|5344415_5346470_-|beta-galactosidase
MSKPVVNEPFELGVCYYPEHWPEELWADDYRRMAETGFTIVRLAEFAWSIFEPEEGVYQFELFDKAIGLAHSYGLKVILGTPTATPPAWLTERYPEVLNVTDEGVVLQHGMRRHYNYSSPKYRELCAGITRQLAQHYANHPGVAGWQIDNELNCEINVFYSESDHLAFRQWVQAKYETLDQLNDAWGTVFWNQTYTSWSQVFLPRPTPTAKQPNPHQALDEKRFISDNTISFAKIQADIIRELAPSQWVTTNGLFGHLDSHELNEKLLDFFSYDSYPQFASIHTDPEEAEPLRDRSWSLSLSAVRSISPNFCIMEQQSGPGGWVNRMNMPSPKPGQMRLWTYQSIAHGADKLLYFRWRTATRGHEIYWHGLNDYHNQPNRRVREAAQIGRELAEAGKHITGTRNQADVAIVRDYDNEWDGEYDVWHGPFMWQSNKEWFKALQKRHIPNDVLYIRSKTTLKDLIPYQVLIYPHPAIMSDETAGLLDQYVQQGGTLIFGCRTGYKDTRGQCYMRPFPGAARDLCGITVEEFTMIQGTRLPTSIRWGNDPEALTSADAFNDILHVEEDTIEVMGTYASDYYAGKPAVTRNRRGMGEVWYYGAVFNAEAAYKIIDSLNLSSPADEWLELPPEVELQIRSNDKSGYAFLLNYSEEAVTITLKEHKTDLLTGETLSGTCELEGFGVRVLY
>NZ_CP048429.1|WP_062528039.1|5346631_5347474_+|AraC-family-transcriptional-regulator
MNKQCYLPKPAYTKYVCYPEFLGHYSNFPQHAERRSEGLLNSYNLHLIFAGEGYVFHEGERIPMGRGKGFLFPRGAYQQYGSALSQPWDVRWVHFGTGLPLPLLEMVDQSRGYFFTFDPDAGLESLFEEMYRLGMSYETRCEPRLSALLYEILITLLQNSEPQDGAVSLEVRHSIRNAANIIHRECAGAWTLESMARLSGYSSYHFLRLFRLIMGKTPNRFLTDCRLARAKLLLVSTGFSVAEIAHQTGFAQSSYFIKVFRQFEGMPPNQYRRAFGTATN
>NZ_CP048429.1|WP_062528042.1|5347594_5350255_+|hypothetical-protein
MRKHRTTYIALLLSTFIIGQMSVYPASAAPAAANNAGSKVTAAPAASAAPKNLGSIPLEAGVKATLEDVSIWSQSGGNILTYTLNYSNTGGSNASLNHYFSRVVTSGGSVIPGNPVTADAAKNKVVSKQTERVTYYVNIGKINSLKGLKVTMYVWDPKSKGYLRHAGALSLPANYSPSAVSGQRQNITISNIPVSAASESLQIYKYGGKVFAKVGINFSNEGNKVLTDPGYTAYLMSAGGTAFELALDNSMAGYKIQPLEKKTIYYVTEIPPYLKTDNMKVQYVQRDETLKFELPKFSSKLPAAVTPDLNVGKGAIKKIGINSNTIELQLTGANVYGEDASGVWTFQFRLKNAGKQAVVLPSYDLSVRTAKGTTFPISSNGVSGVSLKPMEEKVVQLTAQIPLEVEQNSLKLQMIESVSGNSSGNAPGTPAQGTPGTSGSTPEGSGTGGAAGTGGSNSPGTTISPSATAKLSIPVAYFAVPYTLRADTQKAMNYRITNQYGTFDYSLMSLQRFPWKNDDILIAKLNITNTQSVNLTLPDLKGALKLDNNDLSASTDLFMEKEASSIAPGKSAEVYVFSKIPYTTDFKSTRVNLYSVVKEENVPFLSLNTSSVTDAVYKVDRGGSYTIVGKGKNAKVQENKTVIYQGINSNIVYTEMFLSSEEKRQSKMARLQAYFKTADGQLYETTPVQPDMAATPGGKQLVTFWAKLPKSVDASDVTLYLGPGINGNKFTEAGQESTGFINVSALELSPQYITPVNNLSKVTLYPYTLSVLNSEGRNARGSDTINITMNYSLLRDISYDVGSFDHKLVLKMTDPYGQTQEKSLTLGTDLTEGDNNRYSVSFSSEAYKKLAGGTYSIRLYDEFQGERIELANQAYTLKIERATTSD
>NZ_CP048429.1|WP_062528550.1|5350296_5351022_+|ABC-transporter-ATP-binding-protein
MLRVENISHTFKSGSEVTPVLHNISFEVHQGDMVALLGSSGSGKSTMLNLMAGLMKPTEGHIYIADQDIVKMGENKLAVFRRKNIGFIFQAYELITSLTVRENVELPLVFQSVSPSVRKKKSLALLEAVGIPDKSELFPSQLSGGQQQRVSIARSLITEPSIIFADEPTGNLDTTTEEEIIRILIDLNKKMKTTFIVVTHEPEVAQRMQRIFTLRDGHMITEKRGTAESEPAEGVPDSENS
>NZ_CP048429.1|WP_062528044.1|5351008_5352397_+|ABC-transporter-permease
MRILDVTRLAWGQIKRRKVVTGLCMLGLSIGCSAIVVALSLGDSVQSYVSREVTAQFKMDEITVMPNEGVSQGGGPTATKTGANSNVGKLTEQKLDIIRGLKHVTAAAPFQDAGYFELLTADNKISNFNLVVTDLSLLTKYDFSFQQGVPSKQIGSVVLNYGATIGLMDIETQKKLMESLSSNSYDPEVMRQYDELSRMPSNLYRQQVQFRHSDYETSTGGVKSYLSSQLQVAGILKKADGMSADQAMYDKKIYVSQETYDRLKDEFNIKPEKPEMGQTYNQALIRVDSQDNLPQVETLIKKLTLNTSNNLYQLEQLKSQFAMFKMVALGVGGFILIIASISIIVAMTMSTHQRRRQIGIMKVLGSNMRQIRTMFIMEAALLGFMGGVLGIGFSYLIVEGINKLVSSSGQMTMGTGESLVVSIPLNSIPVGIVFAVLTGVLSGIYPAISAARTNALTAIKRD
>NZ_CP048429.1|WP_062528046.1|5352427_5353516_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MKRIIKWIIIVAILAVAGYFIYDKMSKPKEQLQPVEPAQVISFPVTKESMTKSIQIKGTSKYEHETLVYAPFASKVTDWKVENGGQVKKGAVMYTLDTETLKNEIATQEATIRKAKLEAELNAFVSQQTEESAAVGATEAERLKALATQETSRIGDDLNQVNAEIQAREIADKKKKIQSASYRAPSSGIFLFDNASEIPRMVTDNQYLGKIVDLSKLQFIALVGEQDVFNIKPGMKVKVKMTASKDVKLNGVVKKVSKFATTVAAKDTTTTQAPQFEVVISLEPNELLIGGLSLTGEIETLRKDNVTAVSNIAIIHEGDLSYVMLDKGNGQTEKVQVKTGLETTDKVEILSGLKPGDTVVLQ
>NZ_CP048429.1|WP_074647750.1|5353611_5354934_-|beta-N-acetylhexosaminidase
MKNRYYSILTLSAFILLLLLATGCNSNAATPSRTSAPAPSPATGAATEQPVTPSSSPAASQPPAAESSPAPFQAVDELTRKIAGMTLEEKIGQMLLVGIDGTTLEPEAKRMITEDKAGGIILYADNIKDLKGMVNLINALKKSNSANPAPLFMSVDQEGGKVSRMPKEYASIPSNGKVGRSNDTDAAGTMGKLLAREVLAAGFNMNFAPVLDINSNPDNPVIGDRSFGSSASIVSKLGVAEMNGIASEGVVPVVKHFPGHGDTAVDSHLDLPVVDKTAPQLAKLEWIPFQAAIKEQADAVMVAHILFPKIDPDSPASLSRMIIGDQLRGDMGYQGVVITDDLTMGAIMKHFDLGTAAIKTVNAGSDILLIAHGYENAQLARKALLQGVRGGMLDESRINESVYRILALKQKYRLTDKPVPVPDLTELNNEIKIWRSNLSK
>NZ_CP048429.1|WP_020434164.1|5355129_5355633_+|ferritin
MKDELVNALNEQMNFEFYSAHVYLAMAAYCSGESLDGFANFFLIQAEEERFHAMKIYKFLNDRDFRATLAALPEPKNEYSSMLDAFEHAFAHEQQNTTRFYHLADLALDEREHATIYFLKWFIDEQVEEEALFSNIIAKLKRIETDSNAFYMLDAEFAGRTFTAPAE
>NZ_CP048429.1|WP_062528048.1|5355887_5356751_+|cation-transporter
MENYSDIKQSEKGAWLSLFAYILLSAVKLLIGTASGSQALLADGLNNSTDIIASLAILAGLKISRRPPDSNHSYGHFRAETVAALVASFIMIAVGLQVLYQGVNKFIQPALETPDLIAAWTAAGCAVVMFAVYMYNIRLARKLNSNAMLAVAQDNRSDALVSIGAFIGIIGSQFGLPWLDPLTGIIVGLLICKTAWEIFRKATHDLTDGFDADELELMKQTVAEIQGVESIKDIKARIHGNNVLVDTTVCVDSNLNVVQSHDITEEIEDQLKDRHRVSNVLVHIEPV
>NZ_CP048429.1|WP_062528050.1|5356912_5358340_+|extracellular-solute-binding-protein
MNNKSGRQSFRERLDYMVSKLRTDILSGILQPGAFLPAESTLAKQFELSNKSVRRGLDVLVQEGLIVKIDRVGSMVMESVKERIRIHFGCSSSLTKDFRLDDLIAEFHRMHPGIHVLPLALNNFDHVNTATELINNGMLDVLSLNSTQFQELAENGSAGLLETLEPDPGLYPIASEAFLHDGQLLAYPISFSPVVLCYNKAHFREADLPEPDSYWTWDDLIEAARQLSEKRGRHAVYFVPASENRYSVFLLQSGIRTMEDDEHHQTLSPETANSLNVYSRLVNNHQIFPKYLAGNHDDETVSLFVQEQVSMILTTYYNLNDFKDLSLDYDLAPLPTLKAKDPQKTLLVTIGAAVVENSRQKEAARQFVEFLASPEAQRMIRERSVSIPARKRIAEMTVDDHLNRPSRYLMYRELFPTFSYLRDLGLPIAVLQSFRKLLNAYWSRMIDETALYEEMSRLIAEENKVKADKATKTLL

Crispr_ID: NZ_CP048429_31

• CRISPR_ID: NZ_CP048429_31
• CRISPR_location: 5400409-5400483
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_31

Consensus_repeat	Method
TAGGTGGAAAAAGGATAACTAATT	CRISPRCasFinder

spacers of NZ_CP048429_31

>31.1|5400433|27|NZ_CP048429|CRISPRCasFinder
TGCTTGAGCATCCTACGATCCACATGC

CRISPR arrays and Neighbor proteins around NZ_CP048429_31

CRISPR arrays

The CRISPR arrays of NZ_CP048429_31

>merge|NZ_CP048429|31|5400409-5400483|CRISPRCasFinder
TAGGTGGAAAAAGGATAACTAATTTGCTTGAGCATCCTACGATCCACATGCTAAGTGGAAAAAGGATAACTAATT

>NZ_CP048429|31|27|5400409-5400483|CRISPRCasFinder
TAGGTGGAAAAAGGATAACTAATT	TGCTTGAGCATCCTACGATCCACATGC
TAAGTGGAAAAAGGATAACTAATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062528107.1|5398235_5400029_+|alpha-galactosidase	unknown	unknown	gnl|CDD|269892
NZ_CP048429.1|WP_074647762.1|5400830_5401718_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|176112
NZ_CP048429.1|WP_062528122.1|5407418_5408183_+|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|224007
NZ_CP048429.1|WP_062528118.1|5405246_5406071_-|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225117
NZ_CP048429.1|WP_074647765.1|5408203_5409292_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP048429.1|WP_062528113.1|5403079_5403487_-|VOC-family-protein	unknown	unknown	gnl|CDD|319899
NZ_CP048429.1|WP_062528093.1|5384678_5384996_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062528105.1|5396414_5398133_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519
NZ_CP048429.1|WP_062528557.1|5393115_5394726_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270300
NZ_CP048429.1|WP_074647758.1|5387932_5390932_+|hypothetical-protein	unknown	unknown	gnl|CDD|366944
NZ_CP048429.1|WP_062528114.1|5403677_5404268_+|hypothetical-protein	unknown	unknown	gnl|CDD|226472
NZ_CP048429.1|WP_062528120.1|5406231_5407395_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP048429.1|WP_074647755.1|5385474_5387781_+|hypothetical-protein	unknown	unknown	gnl|CDD|374209
NZ_CP048429.1|WP_062528103.1|5394847_5396413_+|response-regulator	unknown	unknown	gnl|CDD|227095
NZ_CP048429.1|WP_062528095.1|5384997_5385204_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|224393
NZ_CP048429.1|WP_062528556.1|5392091_5392997_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP048429.1|WP_062528116.1|5404286_5405141_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|236216
NZ_CP048429.1|WP_062528111.1|5401914_5402991_+|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl|CDD|225411
NZ_CP048429.1|WP_062528101.1|5391080_5392043_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
NZ_CP048429.1|WP_062528125.1|5409329_5410334_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062528107.1|5398235_5400029_+|alpha-galactosidase	gnl|CDD|269892	cd14791, GH36, glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.	2.33163e-63
NZ_CP048429.1|WP_074647762.1|5400830_5401718_-|LysR-family-transcriptional-regulator	gnl|CDD|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.61594e-79
NZ_CP048429.1|WP_062528122.1|5407418_5408183_+|sugar-phosphate-isomerase/epimerase	gnl|CDD|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	4.77439e-18
NZ_CP048429.1|WP_062528118.1|5405246_5406071_-|AraC-family-transcriptional-regulator	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.2102e-26
NZ_CP048429.1|WP_074647765.1|5408203_5409292_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.21662e-26
NZ_CP048429.1|WP_062528113.1|5403079_5403487_-|VOC-family-protein	gnl|CDD|319899	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to bleomycin resistance proteins, glyoxalase I, and type I extradiol dioxygenases.	4.45111e-26
NZ_CP048429.1|WP_062528105.1|5396414_5398133_+|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.33241e-50
NZ_CP048429.1|WP_062528557.1|5393115_5394726_+|extracellular-solute-binding-protein	gnl|CDD|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	7.46619e-95
NZ_CP048429.1|WP_074647758.1|5387932_5390932_+|hypothetical-protein	gnl|CDD|366944	pfam02156, Glyco_hydro_26, Glycosyl hydrolase family 26.	6.74153e-52
NZ_CP048429.1|WP_062528114.1|5403677_5404268_+|hypothetical-protein	gnl|CDD|226472	COG3963, COG3963, Phospholipid N-methyltransferase [Lipid metabolism].	2.32848e-35
NZ_CP048429.1|WP_062528120.1|5406231_5407395_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.88776e-63
NZ_CP048429.1|WP_074647755.1|5385474_5387781_+|hypothetical-protein	gnl|CDD|374209	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,. Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.	1.76976e-06
NZ_CP048429.1|WP_062528103.1|5394847_5396413_+|response-regulator	gnl|CDD|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	3.91677e-62
NZ_CP048429.1|WP_062528095.1|5384997_5385204_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	1.44975e-18
NZ_CP048429.1|WP_062528556.1|5392091_5392997_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.79215e-60
NZ_CP048429.1|WP_062528116.1|5404286_5405141_-|SDR-family-oxidoreductase	gnl|CDD|236216	PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional.	5.2855e-163
NZ_CP048429.1|WP_062528111.1|5401914_5402991_+|YeiH-family-putative-sulfate-export-transporter	gnl|CDD|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	8.9056e-93
NZ_CP048429.1|WP_062528101.1|5391080_5392043_+|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	2.40151e-129
NZ_CP048429.1|WP_062528125.1|5409329_5410334_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.36472e-61

Protein sequences

>NZ_CP048429.1|WP_062528107.1|5398235_5400029_+|alpha-galactosidase
MKTTITAGCVIRLDGQTGSYQASLTSMKDCAEEGVYYVRLLLTAPAPVVPPELSLKWSVPAVDVQGLWHPSVERSRGLVPDWWQGFSSRATSSAPVISLYGNRGNNVFTFACSDVLHPVELHAGLHEETSCFHCSVTVCAEPGPPVAHLEVVLRLDTRSHPYYEALRGVGEWWAGLPGCEPSPVPEAAREPMYSTWYSFHQQLEPEAVEAECCLAAAMGCKTVIVDDGWQTSDEARGYAYCGDWRVSVDKIPDLKAHVAGIHDLGMKFMLWYAVPFIGKHSEAWDRFKDKLLYVNEAMGAGVADPRYPEVREYLTGIYEQAVRDWDLDGFKLDFVDSFYAAKDSPPGKGAGQDTISVPEAVDKLLSGIISRLRRLKPDILIEFRQNYIGPLMRKYGNMFRAGDCPNDALQNRMKTIDIRLICGSTPAHADMLMWNPRETPAAAALQFINVLFSVPQISVRLDRLPQEHAALLFFWLSFWREHREVLLEGRLEPLHPELLYPLVIARTAQQWVIAAYQDTVIPLPGDLPDRVQVVNGTLLTRLVLELDRVSGPLDITVRDCQGTVTAEYTLNWNSGVYSLEVPAAGVITLQRVRGDRA
>NZ_CP048429.1|WP_062528105.1|5396414_5398133_+|sensor-histidine-kinase
MRRKVNIPFGYKLILPYVLCLLMAVLTVGLFAYAHSVNSLREKTRENLQGTLRQMRDNIRYRTDDIERITNSLYYNYSFQNALRRYDQGWYSYETMTKTLMPALENLLNYTASNIGLSLYLQNESLPEIFYKDGEQNPLLSTKRYEIYHLTRIQDADWYRLLQFSGTLPGLSRWQQILRDKKDGNISLLQRLDDVQRGKEIGLVRVSVQIRDLLDSVDYRKIGEYSTLVVLDASGRTVLQSSPEGAEGENPQTMPGRLVLSEPLHGLGWQLQAYIPDSLFDQSAGEVRRMTLLVSLISAVVLAVLGIWVSGYFSRRIQKIVGSLNAFHDGDFHKRIRFKGNDELAQIAIAFNRMGSNMEELIHKNYVADLQKKEAELESLQAQINPHFLYNTLSSINRLAQFGDIDKLHVMVQELAKFYRLSLNRGEILTTVGKEIEHAKAYVAIQCIKYGERLSVYYDVDPEVLEYTTVKLILQPLIENALEHAWFGATLGIRLVVEKREAEIVFKVIDNGVGMNTDTIRQILAPEGPRIGYGIRNVDSRIKLHHGSGYGVTIASRSGIGACILITIPCRM
>NZ_CP048429.1|WP_062528103.1|5394847_5396413_+|response-regulator
MYKVLLVDDELLDLEGLQRFMNWEGLGMEVCAAASSGFEALEVLESQAVDIMVTDIRMPIMSGMELARRALELNPKLKIIFVSGYEDFQYAKQAISMSASGYVLKPVDDADMRRSLEEVRETLDREQEHSHLERYFSESEPLLRRELFMQLLDGNPDEDKMLPLLQRVGIYWSDTRLYTALLEPDDMSWKLNGYSDGAKAEIENMLEAAIERYCAEEQIQACRTERFHYALILEESVDRARLRRLIQQAVAGTPLTVTIGVGPVVSHLRELRNSFRQARNALRLKLFLGKGKLILHSDARGPISASVKDLDSILQSLFAAMSSYRLIDVDDCNEELFVWVVNMETKLEIYQLFLHIISKLDAYLHTINEDFYELLGLERKHLNILYDLETIDDMKSWLRRRMFELSERLQRKRQGKKRKLVEEIQAYIEEHLEHNVMLRDAANHFSFSPNHLGQIFYEETGVYFSDYVGLRRLERVKVLLGDPKLKVYEAANRVGYKNLSHFSKQFKEFYGVSPGDYRRHL
>NZ_CP048429.1|WP_062528557.1|5393115_5394726_+|extracellular-solute-binding-protein
MLLIAGCGGGNNSAAPSAKPSKEPAATQTAAASASPEASSPAAQSTVKPVSFTYYSNYDWDTTEEWGRDSTTKWIADTLKVKMTPVQSSGAAETKFSTMIASGSLPDVIMMDRGANVERLRQPGLLVPLDDYLDRYPNLKKNAGEATLNMLRSEDGKLYQFPNWYTSSPNGNGGWIINRKIYKELGSPKLETYDDLYAYLKLVKEKHPDVVPLEVGAKGRGLETMYGGFAENKPYLPKANPVGNTLQSIFEDQVFIENMQYASKLFREKLITQDLFTQTGDQISEKLKTGRVAVYVDGDVVNPGRGADTTLRTADPDAGYDIIWPIHKAGLDATKITPNNYNSLGWNVLVITKNAKDPEAIFSYLDWVTSEEGQRILNFGRQGLYWDEFDADGVPILNEAGLNTPQGDKDKERIGRFNWVGNTTFIDQTKAKMDAQLPADKQNWTTLAQQKVTWKTSKNFTEFVNLDPLPDSEEGTIATAVNDIFQEAFAKALYAKSDDEVLSILNKANEDAKKAGYEKLLKYQTEKWQDNLSKMK
>NZ_CP048429.1|WP_062528556.1|5392091_5392997_+|carbohydrate-ABC-transporter-permease
MMKLSAGDKVLQVMIYTVLLLLGFITLYPFWNSLVISFNVGSDTALGGITFWPRSPTLDNYEVVFRDSRIGHAFLISILRTIVGTTLSVLFTAILAYGLSRHELMGRKIYMVFCIITMYFSGGLIPTFLLLRGFGMMDTFWVLVIPGMISVYNMIIFRTFFLGLPAGLVESARIDGCNHIGVLTRIILPISGPVVATLSLFTAVYHWNDWFSASIYINDTRLIPIQTLLKQILNSNIVTDQLQKAIGSSAAAQDRLALVQSVTSKSLIMATTMVATLPIITVYPFLQKYFVKGVLIGSLKE
>NZ_CP048429.1|WP_062528101.1|5391080_5392043_+|sugar-ABC-transporter-permease
MTNVEIERKVITRPKGKPFSWWSRWIRQWDIQLMVVPAMLFIFVFSYLPMYGVLMAFQDYQLFGGFFHSPWVGFKHFEAFFNSPDFWNVMRNTIVISLLKLCIGFPAPILLALMLNEVRLMLFKRIIQTVSYLPHFLSWVIVGGFVGSMLSTDNGSVNMLLMSLHLTSEPISFLSVPEYFWGILVGTGIWKEMGFAAIVYLAAIAGIDPHLYEAASIDGAGRFKQIQLITLPCIRPVIIIFLILAVGNILNAGFEDILILATNPILRDVSDVIDTYVYRMGILNNRFSYAAAAGLFKAVVSIGLLALANKAARKMGSSLW
>NZ_CP048429.1|WP_074647758.1|5387932_5390932_+|hypothetical-protein
MVPRMWRKWFHGWLAAVVLSAVFIVQPAPMQAAGENLLGNPGFEAGDAAWEKWGSPVVTTAEKHGGEKSLQVKRNTGGASASVAVKEGKTYRVGLWVKFAAAGVTNATIDMDAFGAQQTKEQLHFSGSTDWEYRQLLYTPGPGVQHIRLSFWNGTGKDYYIDDAVIRENVDIERPTTPGVWQARHDPGALKLTWAGSTDDMGVESYQLAYKRTDAADWNTVAVPHQESVTEYTYTLDNLDPFSVYAIMLRAKDAAGNTSDAVMGLEATPGPNLVINGGLETGITVPWKKTGTVKTTTYDPHSGQYALQLFHNSTARTLKVPADSSTSYLVSYWSKFNAVTPGTFSVTLDVYQGPAVIRYPFYTNATAAWSRSEQIIQTGNGFACLQLRAGNYSGGDMFLDQVFAGKMPDIPTDLNPGAPADFIAGTVDGVSAELQWAASRGPFGVREYKLLYKKAEDTEWASLTIPYVPGQSQYVYKLEGLSPGSLYDIEVKAVSEGTAISAASALQVTTATMAPVNPDASVEAAALLDRLYAATGNSIYTGQHNYYEEPAKWYDKAAELTGYYPALWGSDFAYYIGEDMGELRQSMIDEAILQGQAGTMVTLTYHQTRPMDPATSGWESVTGDVTEAQMTDIVTPGTELYNQWAAQVDEVAGYLEQLQDKGIPVLWRPYHEMNAEFFWWGARPELFKQLWHNMYDRLTNLHGLNNLLWVWNPNAESSWAYDSAPYYPGHDVVDVLAMDIYNNDYRDTYYNKLVQLSGGRPIAIGENGELPDMQMLREKQPKYVYFMTWSDYLTDKNSISAIQALYSDPRALNNGETGNGPYVPPPVDSYLIDDFESYGGSNGSLRSKWQRNISGNAATVTLDTYGLNSGTYGLKLDYTIGNPGYAGVYRSMGKEWPGMQAITFWLQPDGSNRQLAVQFHETNGEVWEAGIKIEGTAARLVTLPFTDFVRPGWSTGGNGVIDLGSIKEFAFYVAQGSGTQGSGTLYIDDVQAVKLPTEE
>NZ_CP048429.1|WP_074647755.1|5385474_5387781_+|hypothetical-protein
MDGDVDGIVEGNVVGIPSGTGKVWSPASLGGGGYITGLIQHPAQSGVLYARCDVAGVFVSLDGGFSWEARNGGLTKAYHHQVQSFAISPHRPEVLFRCSGEVRSRKFYGSVHKSADGGHTWREVCTGMGFYGNGPTRMYGEVIAVDPCHPEVVAAGGYTGGLWISQDEGETWKRTPLPEERFGCVAFHPGIPGMLYAGTISDDDLNMDYAETGEGGVLGLLQDLPRGKAGRLYASSDHGGTWILLHEGPSFAGLAFDSRDPQRLRAACIWNGILSSPDGGRTWQKDMAGLPEDGQRYGTVVQDSHHPQRWYTAPDVRPHMKAVPPIPLYVSGLAGSGSGEWQLLRLHNDDDLSGFPAYMDHFGSGSRAAAAGWAISKIIVDRFIEDRLYLTNWYGVAVSSDGGRTWCAGHFRGLETTCMEAVAAAPQQPGKFCVTMADHPPKVTEDGGRSFWNLPGIPGYSGSTAVVISRSDSRRYLYGLVGHGRTACIALHRDGGANASAVLPLGTGLFVQALREDGVKNGTFYAYVDGPVAAGAGIYRSSDDGMTWEQTAFRPPAYMDTLPYHKNRIEAELLSVVVYQVKNACGANQMLAASPFHQGRVLAGEWTEGIWESRDGGDTWKSIGEGLPFQRSGPASVLNAIAYSTNHPDWIYAGFISEGLWRSSDGGRTWSKLYPLIEGEVFNVSALAVGTDDEGEDLLILASEPMVVNGTDSQAVYSPDGGCNWQAWQQSGIGAVRWKGMALDCEGRQVLGVSCGNGAFHVGLADKI
>NZ_CP048429.1|WP_062528095.1|5384997_5385204_+|helix-turn-helix-transcriptional-regulator
MGEHLVLKNKLREARSEQNLSQTQLAEMVGVSRNTISSIETGQFNPTAKLALILCIALDKKFEEMFYF
>NZ_CP048429.1|WP_062528093.1|5384678_5384996_+|hypothetical-protein
MKKEEILEKSREEKRDEGKEFVFNKGRKSGVIGMVILFGILAVFNLYNNRQETTYALVAMFFGYLGSESFGIYNLTNKKMDLLKTIIGCILSVSFLVLYLNGVRN
>NZ_CP048429.1|WP_074647762.1|5400830_5401718_-|LysR-family-transcriptional-regulator
MIVDALKVYVTVVEQSHFSKAGELLNLSQPGVSLHIRNLENELGTRLLHRSPKQVRMTEAGTILYKYAKQILSLYDDAGREIRLLRDEVTGNLQIGASFTIGEYILPARLAEFARQYPLVSLQVTIGNTEEIIAAVRANQLDVGFIEGETADPELTIIPYMKDEMIVIAPAGHPLADSLAVEQDMLQDQTWVLREHGSGTRAYSDHFLQESGVHVKRSYVFNSSQGVKEAVAAGLGLGMLSRWIVRKELAGGEISELRLRQRLLEREFLIIRHTDNPEGMAVQMFIKKVLAAPEK
>NZ_CP048429.1|WP_062528111.1|5401914_5402991_+|YeiH-family-putative-sulfate-export-transporter
MNHTHKLYRITYWHPGFIQGIGITFLLAVAAKYLALLPLLNIMGQLVLAILLGIALRGVAGVPQKAVTGIQFSSKKLLRAGIILLGMRLNFADILAAGPKVFAIAVINIAITLFTVYGFAKWFGIDRRLGLLTACGTAICGAAAVAAIAPQIQASEHETAVGAATVAILGTIFTLAYSLLYPFLGLSPSGYGIFAGGTLHEVAHVIAAAAPAGKEAADLAVIVKLTRVAMLIPVAVVIGCRESYRQRKQASAEETSKEQQFQEKRKTIEWKRLPIPWFILGFLLMSGVNTLGIIPVKLASGLIALAYLLLAMAMVGMGLGVDLKTFGRMGKKPFLAGLAGSVLLSALGYVLVFAFGLA
>NZ_CP048429.1|WP_062528113.1|5403079_5403487_-|VOC-family-protein
MANFTAYLMSEDAKAQAGFYIQALGGKMNSITTHGELPDAREDLKDKVINLSFNAAGVHFMMSDSIFEPVSYGNSVNLNLEFADEAEAREAFEKLAEDGVVKEAIAPAFWGALYGHVQDKFGILWMITTVPKQVQ
>NZ_CP048429.1|WP_062528114.1|5403677_5404268_+|hypothetical-protein
MMKMSDWVEERAVFLYKFLRFPRQVGSFAPSSAELAAVMTKQVPWHQVQAIAELGAGTGAITRHIQRSATADTKVMLFEKDPFLRKRLRAAYPGYACHADCLRLELALHNDNCGPLDCILSGLPFFNFPQSVRDLLMGQIVSSLKEEGLFIAFQYSKQMKKQLEQHFVIEQICFVPRNLPPAFVYVCRKKRTGLDA
>NZ_CP048429.1|WP_062528116.1|5404286_5405141_-|SDR-family-oxidoreductase
MAELALQPALAGKVAVITGGAGVLGAVMAHELGRQGVKVAILNRTVDKGDSLAAEINAAGGQAISVACDVTEDSSVHRAAAEVLNHWGPCDLLINGAGGNQPSAVTTKEIFTEGDLENPEITSFFDLSATGFRQVMDLNLIGTLIPTQIFAKQMLGRPGASVINISSMSAAAPMTKVPAYSAAKAGVNNFTQWLAVHLAEAGIRVNAIAPGFFLTKQNERLLLREDGELSERSHKIISQTPMRRFGKPEELLGTLLWLADEGMSGFVTGITVPVDGGFLAYSGV
>NZ_CP048429.1|WP_062528118.1|5405246_5406071_-|AraC-family-transcriptional-regulator
MDLLNRQGHLLQNLNVTVTYAQLSTKYPGWNRTNETPSFNRLYFIDCGEGKVIINGVTYYPRPGQLMIMPAGSTQTTETSPNNPYARYFCHFDAHIGEWPLFHSANKLYISDAADPDAVRAVFTEMIRLFQDDSFLSKIRLQAALLNLLALCLEAGGYSDFMDDLLHTSDQGKLAHVLEYIDQRLMRPLEVEELAELVHLHPNYFIPYFKKFMGLTPMHYVQLKRMELAKKQLSYTSFSISDIAEQVGMELAHFSKYFKKTTGVSPSAYRSSTR
>NZ_CP048429.1|WP_062528120.1|5406231_5407395_+|Gfo/Idh/MocA-family-oxidoreductase
MAKVRYGIIGIGNMGRAHALSLGDDVEGAELAAVCDISPERLEWAAEQLPGKVKHFSTAAEMFQSGTIDAVLISTPHYDHPPLAIEALGYGLHVLIEKPAGVYTKAVQEMNEAAAKSDRKFGIMYNQRTNPIYQKLRELIHTGELGEIRRTNWIITNWYRSQNYYDSGGWRATWAGEGGGVLLNQDPHQLDLWQWTTGMMPTRIRAFCHFGKYRKIEVEDDVTAYVEYANGATGLFITTTGEAPGTNRFEITGDNGKIVIEDDTLTFWRLRTPEPVFNAEFKGGFGAPECWKCEIPVKHGNGEQHIGILRNFTNAILHGEPLLAPGEEGIHGLTLSNAMYLSAWTDNWVELPIDSDLFHEKLMEKVQNSTFQKDTTVQKTLNVTGTH
>NZ_CP048429.1|WP_062528122.1|5407418_5408183_+|sugar-phosphate-isomerase/epimerase
MKTSTIAAQMYTLREFTQTPEGLRESFLKVKDIGYQAVQVSGIGPIDPQLVKQYADEAGLAICATHVPWNRLVNDLDALAAEHRLWNCNYVGLGALPGEYQTSQEGYRTFAKKASEIALVLKQKHGLQFVYHNHDFEFERLDGVTGLEVLLQEADPEAFGFELDLYWVQAGGGSPVDWIHRVKDRMRVVHLKDMAVVARKAEFAEIGQGNMNYPAIIEACRETGVEWFVVEQDVCRRNPFESLKISLDYLHTLL
>NZ_CP048429.1|WP_074647765.1|5408203_5409292_+|Gfo/Idh/MocA-family-oxidoreductase
MSRKDGMNYAPRHEAKPVVGPGEFVIAAIALDHGHIYGMCNGLVEAGAQLKWVYDPDPEKVKAFIAAYPGVRAARSEEEVLEDPEVRLVAAAAVPSGRGPLGLRVMAHGKDYFTDKAPFTAMEQLEAARLQSEKTKRKYMCYFSERLHVESAVYAGQLIRQGAIGRVLQVIGMGPHRLNAPSRPGWFFQREKYGGILCDIGSHQIEQFLYYGNCLDAKVLHSKVANYNHAAYPELEDFGDATLVGDNGTTQYFRVDWFTPDGLGTWGDGRTIIMGTEGYMELRKYSDIARSNTPDHVFWVDGQGEHYEHVAGKVGFPFFGELILDCLERTELAMTQAHVFKAAKLCLQAQSQALNLTPDTLR
>NZ_CP048429.1|WP_062528125.1|5409329_5410334_+|Gfo/Idh/MocA-family-oxidoreductase
MSTIGAAIIGCGAIAPLHANAIQSMEGARLVAVVDTDPVRADQAAHDYGCEAAADYRQLLGRTDIGIVHLCTPHHLHAPMAAEFLQAGHHVLTEKPMALDVPSARRMQEAASASKGQLGVVFQNRYNAPSIRIKETIDSGIMGQLICMKGIVTWHRSEDYYTESSWRGKWATEGGGVLINQTIHTLDLLQWFGGEIASVTGSVTTDVLNEVIEVEDTAHACIRFKNNVRGLFYGTNAYSVNSPVEMELIFEQGTLLLRRDCLYLWKDGQETLLSEPVSTAVEGKSYWGTSHKRLILDFYKHVREGRKFWIDASEGIKALEVIAGIYKSAVKPSN

Crispr_ID: NZ_CP048429_32

• CRISPR_ID: NZ_CP048429_32
• CRISPR_location: 5919631-5919719
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NZ_CP048429_32

Consensus_repeat	Method
CGCTTAAGTTTTGTAAGCTTCTGCT	CRISPRCasFinder

spacers of NZ_CP048429_32

>32.1|5919656|39|NZ_CP048429|CRISPRCasFinder
TCGGTGAATCGCTTCGTACAAAACTCACTTCGGAAGCTT

CRISPR arrays and Neighbor proteins around NZ_CP048429_32

CRISPR arrays

The CRISPR arrays of NZ_CP048429_32

>merge|NZ_CP048429|32|5919631-5919719|CRISPRCasFinder
CGCTTAAGTTTTGTAAGCTTCTGCTTCGGTGAATCGCTTCGTACAAAACTCACTTCGGAAGCTTCGCTTAAGTTTTGTAAGCTTCTGCT

>NZ_CP048429|32|28|5919631-5919719|CRISPRCasFinder
CGCTTAAGTTTTGTAAGCTTCTGCT	TCGGTGAATCGCTTCGTACAAAACTCACTTCGGAAGCTT
CGCTTAAGTTTTGTAAGCTTCTGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062528500.1|5917943_5918780_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|223673
NZ_CP048429.1|WP_025704561.1|5923321_5923561_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062528496.1|5911371_5912169_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225928
NZ_CP048429.1|WP_062528504.1|5922515_5923184_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062528510.1|5927919_5928516_-|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|378279
NZ_CP048429.1|WP_062528509.1|5927339_5927798_-|DUF3939-domain-containing-protein	unknown	unknown	gnl|CDD|289820
NZ_CP048429.1|WP_062528503.1|5920902_5921214_+|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|223713
NZ_CP048429.1|WP_062528502.1|5919736_5920744_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|223787
NZ_CP048429.1|WP_074648009.1|5913128_5914562_-|hypothetical-protein	unknown	unknown	gnl|CDD|373045
NZ_CP048429.1|WP_062528499.1|5916784_5917780_-|hypothetical-protein	unknown	unknown	gnl|CDD|378698
NZ_CP048429.1|WP_157243870.1|5910915_5911068_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_020430772.1|5914748_5915306_-|outer-spore-coat-protein-CotE	unknown	unknown	gnl|CDD|371168
NZ_CP048429.1|WP_062528501.1|5918776_5919556_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213260
NZ_CP048429.1|WP_062528506.1|5924930_5926019_-|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl|CDD|234988
NZ_CP048429.1|WP_062528505.1|5924112_5924739_+|FMN-dependent-NADH-azoreductase	unknown	unknown	gnl|CDD|184140
NZ_CP048429.1|WP_062528508.1|5926530_5927202_-|HAD-family-hydrolase	unknown	unknown	gnl|CDD|223943
NZ_CP048429.1|WP_167523072.1|5923661_5923802_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062528498.1|5915531_5916554_-|HD-GYP-domain-containing-protein	unknown	unknown	gnl|CDD|225116
NZ_CP048429.1|WP_074648011.1|5904917_5907020_-|DNA-mismatch-repair-endonuclease-MutL	unknown	unknown	gnl|CDD|234630
NZ_CP048429.1|WP_062528495.1|5907487_5910328_-|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl|CDD|235444

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP048429.1|WP_062528510.1|5927919_5928516_-|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	3.4e-17	57.7	0.3
NZ_CP048429.1|WP_062528503.1|5920902_5921214_+|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	2.7e-13	45.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062528500.1|5917943_5918780_-|ABC-transporter-permease	gnl|CDD|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.01322e-62
NZ_CP048429.1|WP_062528496.1|5911371_5912169_+|GNAT-family-N-acetyltransferase	gnl|CDD|225928	COG3393, COG3393, Predicted acetyltransferase [General function prediction only].	4.45351e-52
NZ_CP048429.1|WP_062528510.1|5927919_5928516_-|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl|CDD|378279	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087). This domain, found in various hypothetical prokaryotic proteins and transcriptional activators, has no known function. Structural modelling suggests this domain may bind nucleic acids.	3.562e-27
NZ_CP048429.1|WP_062528509.1|5927339_5927798_-|DUF3939-domain-containing-protein	gnl|CDD|289820	pfam13075, DUF3939, Protein of unknown function (DUF3939). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 150 amino acids in length.	1.7588e-56
NZ_CP048429.1|WP_062528503.1|5920902_5921214_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	2.50722e-12
NZ_CP048429.1|WP_062528502.1|5919736_5920744_-|ABC-transporter-substrate-binding-protein	gnl|CDD|223787	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism].	7.21938e-44
NZ_CP048429.1|WP_074648009.1|5913128_5914562_-|hypothetical-protein	gnl|CDD|373045	pfam14395, COOH-NH2_lig, Phage phiEco32-like COOH.NH2 ligase-type 2. A family of COOH-NH2 ligases/GCS superfamily found in the neighborhood of YheC/D-like ATP-grasp and the CotE family of proteins in the firmicutes. Contextual analysis suggests that it might be involved in cell wall modification and spore coat biosynthesis.	1.02147e-119
NZ_CP048429.1|WP_062528499.1|5916784_5917780_-|hypothetical-protein	gnl|CDD|378698	pfam11728, ArAE_1_C, Putative aromatic acid exporter C-terminal domain. This region is a presumed intracellular domain found in a set of bacterial presumed transporter proteins. The region is about 160 amino acids in length.	4.98855e-51
NZ_CP048429.1|WP_020430772.1|5914748_5915306_-|outer-spore-coat-protein-CotE	gnl|CDD|371168	pfam10628, CotE, Outer spore coat protein E (CotE). CotE is a morphogenic protein that is required for the assembly of the outer coat of the endospore and spore resistance to lysozyme. CotE also regulates the expression of cotA, cotB, cotC and other genes encoding spore outer coat proteins. The timing of cotE expression has been shown in Bacillus subtilis to affect spore coat morphology but not lysozyme resistance.	3.17299e-83
NZ_CP048429.1|WP_062528501.1|5918776_5919556_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.77579e-107
NZ_CP048429.1|WP_062528506.1|5924930_5926019_-|ribosome-small-subunit-dependent-GTPase-A	gnl|CDD|234988	PRK01889, PRK01889, GTPase RsgA; Reviewed.	1.05714e-167
NZ_CP048429.1|WP_062528505.1|5924112_5924739_+|FMN-dependent-NADH-azoreductase	gnl|CDD|184140	PRK13556, PRK13556, FMN-dependent NADH-azoreductase.	4.32691e-124
NZ_CP048429.1|WP_062528508.1|5926530_5927202_-|HAD-family-hydrolase	gnl|CDD|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	1.31416e-36
NZ_CP048429.1|WP_062528498.1|5915531_5916554_-|HD-GYP-domain-containing-protein	gnl|CDD|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	6.66997e-75
NZ_CP048429.1|WP_074648011.1|5904917_5907020_-|DNA-mismatch-repair-endonuclease-MutL	gnl|CDD|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
NZ_CP048429.1|WP_062528495.1|5907487_5910328_-|DNA-mismatch-repair-protein-MutS	gnl|CDD|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0

Protein sequences

>NZ_CP048429.1|WP_062528501.1|5918776_5919556_-|ABC-transporter-ATP-binding-protein
MLPIVQLKEVTHAYLGDREASLAIENFSLYVEAGEFVSLVGPSGCGKTTLLSIIAGLLQPSRGEVFVSGHMVSGPSPEVGYMLQQDYLFPWRTILDNALLGLELTGRLNENSRQQTIGLLGEMGLGGKEHAYPAQLSGGMRQRVALVRTLSTDPGLLLLDEPFSALDYQIKLQLEDLVSETLRRRGTTAILVTHDLSEAIAVSNRVILLQPNPGKIRKIFTVPEAIRSTPPLYARDLPGFAELFHEVWKEMELAGRDEL
>NZ_CP048429.1|WP_062528500.1|5917943_5918780_-|ABC-transporter-permease
MKPVEQIEIAASRALWLEEKQEEHQKKKRSWHHRVMAVRGSLLVLFFALWEAGARLGWIDKLLFSYPTKVFGQIWGDMASGSLWPHLGMTVGETVVGFLLGTLLGTLLAIVIWWSPFLSAVLDPYMVVFNSMPKVALGPIFIVMFGAGFTAIVVTTLSITVIITTLVVYNSFCSVDPNLVKVARSFGASRVQVFNKVILPSSFPTVVSTLKVNVGMSWVGVIVGEFLVAKTGLGYLIIYGFQVFNFTLVMSSLLIIAAVATAMYQLVVYVEKLILSRR
>NZ_CP048429.1|WP_062528499.1|5916784_5917780_-|hypothetical-protein
MGFRIIKTAAATLLSILLAAAVGIPNAQSAGLLAILGVETTRKRSLRTITARFLASLVGLFFGCILFFFLGFHYWVLGLYVLVGFPMIVKSGYKEGIVTSSVIVFRVFGQAELSVHVLLQQIELLFVGLGSAGLVNLIYMPQTGGVIAGIRKEVDGYFSVIFTQMARTLRDPGYLWDGKELIGAGEAVQRGLTAASREMENHVIHPDEAWNVYFYMRKEQLESIQNMMQLLSQVYRQLPHGDMVADLFDQLSNDVLAEEYTGRTEKLLDGLEKEFQGMELPETREEFEVRSAILQLCRELSLYLNIAKRYKMPVDIKPVKRPVPAKGNSRV
>NZ_CP048429.1|WP_062528498.1|5915531_5916554_-|HD-GYP-domain-containing-protein
MNNSNEQYIGKQLVDNLFNHNGVFVLPAMTLLSSEHVRLITQHRIILQPHDVIQLDSEAFYQLAVDDCTAAMENIFDQLRYTKSKRLPMLELKNEVIPFIQQVSEKNDFFGILAALQTKDDYTYRHNVAVGILSTLLGKWLKLDPEELGMLTIAATLHDIGKIMIPAEILTKPGPLTDEEFDIMKKHTTHGYELVRDTPGTTHMQALVALQHHERMDGSGYPFGVMGHRITDFSKIVAVTDIFHAMTSDRFYSEAAPLYEVLTQMEDYSFGKLDPYICGVFIRKLMQSMIGNEVLLTDGRMGKIIMILAHDPLRPLVNIGEDFIDLSKNRHLGIVRVIPQ
>NZ_CP048429.1|WP_020430772.1|5914748_5915306_-|outer-spore-coat-protein-CotE
MSLSHKRQTREIITKAICGKGRKFSTATHTVTPPHHPTSILGAWIINHQYEAVAAGNGIEVIGTYDVNIWYSYDKNKQTEVAKETVSYVELIPLSYLDPRHRAATVEVSAEATQEPNCVEAGVSPGGGSVTLRVEREFEAELVAETKVRVYVTDQSDDPEDKDYDFDGESFDYDDLDPDALDDEL
>NZ_CP048429.1|WP_074648009.1|5913128_5914562_-|hypothetical-protein
MNEGLPTYLLWSDAQREDRLRRNGLETLLAPAEGSGPGKGITGLSVAARSYKQYYRVRVFNLEVLEIRPLGTGAAMKPAALPPVIRAGVARGNAADEGTALADIALHDPEWMPRLFGEGGAAGEHSRSATPASSGRQRGAAGKIRDTAVRALYTLGLDSGEVLLKTLGGRRYRVDKVTPLRAGSGGVLPEPYRAASLALARSLALEPPGRPGLLMGMDPEFLLLRESTGRAVPASRYLPMDGVAGCDAGPPGTRGAFPVAELRPAPRGEPRALLAQLMSAARTADRLIPDRSLRWRAGGMPLPGWALGGHLHFSGVTLCAPLLRALDNYLALPLLLLEDACAAARRPRYGVLGDFRLQPHGGFEYRTLPSFLVSPVIAKGVVFLAHLIVSRYEDLTLRPLDREDLHAAYYSGDKPPLRAAFPPLAAQLRALPGYAQAARYIEPLFSCIAAEQTWDESRDIRGLWCGKLRTSERDMAK
>NZ_CP048429.1|WP_062528496.1|5911371_5912169_+|GNAT-family-N-acetyltransferase
MIRKLGDADLGPLMTLVSKDPALNLFIIGDVENFGFEQEFMELWGDFREEDGQLIAVLLRFYGNFLPYADGPFDAAGFAELMQAGPKFEMVSGSAETVQAVAEHLNIRKEKQMRFAELRKLNSTLNTTAASAHAIRQATTDDVDAICLLTDQIEEFDNNPEDSRSSLRKTLETGTGRTYFMEQDGKVIATASTAAESSMSAMVVAVATHPAFRGQGLASRLVARLSADMLHEGRTPCLFYNDPQAALIYRKLGYQDIGFWTMLYV
>NZ_CP048429.1|WP_157243870.1|5910915_5911068_-|hypothetical-protein
MTTRKVWTFCRSLSADFLFYTAVGGENPQTADAFDASFPADVFQMDANAP
>NZ_CP048429.1|WP_062528495.1|5907487_5910328_-|DNA-mismatch-repair-protein-MutS
MANYTPMIQQYLKVKEGAKDAFLFFRLGDFYEMFFEDAILASKELEITLTGREGGGEERIPMCGVPYHAAEGYIQRLIEKGYKVAICEQLDDPAVTKGMVRRDIVRVVTPGTVMDGKIIADKNNNYLVCVTEEDGMMALAACDLTTGELYVTSVLSGAEWLRDEIGIYEPAEIIGDAALLDMLRSEASLLAKPVVYTPWEKREEELARRQFGEAAWVRLEKERGQCLALLISYLSETQRRSLGQLSQISPYEPGNYMILDPFTRRNLELTETVRERSKKGSLLWLLDRTETSMGGRLLRRRIDKPLLQRAPIERRLEAVDYLYNQFIVREDLRGALKEIYDLERLVGRIAFGSANGRDMNALKLSLAQIPALKDMCMASGSATLREIGASMDVCAELREDIDRAIVEEAPVSVRDGGIIRAGYHERLDELREASSSGKRWIAELEAKERQATGIKSLKIGYNKIFGYYIEITRSNLSSLPEGRYERKQTLANAERFVTPELKEKEALILEAQDKMTDLEYSLFIELRDRISAQIPRLQALAEKVAEIDVYQCLAAVSAEHRFVKPKLTDGYDLRLTGGRHPVVEAVLKDAAFIANGSTLSKEEGNILLITGPNMAGKSTYMRQVALICILAQIGCFVPAGSAEVPLIDRIFTRIGAADDLIGGQSTFMVEMADIQVMTEKATARSLIIIDELGRGTSTSEGMAIAQAVIEYVHDTIACKALVSTHFHELAHLEQSLRGLRNYSMAVQESGDKVNFLRKLVPGAADSSYGIYCARLAGLPEGIIDRAYGLLQSIEQAAPPGTVSLHYGSGYTEHTGQGIQENQALAVPPNSEEDPDAGGQAYASSRSGSVYSDGGSSDAPLAAARLETAVSLASSAAEEDNEVVQLSIFGEEEPRRNRKGGAAAPAVKENPLVKELISAVQSADLMNMTPLQAMGLLNELKMKAKEL
>NZ_CP048429.1|WP_074648011.1|5904917_5907020_-|DNA-mismatch-repair-endonuclease-MutL
MAKIHVLDEHIANQIAAGEVVERPASVVKELVENAIDAGSTRIEVSVEEGGLQSIRVKDNGSGIDPEDCETAFYRHATSKILNGRDLFQITSLGFRGEALPSIASVSKLSLLTSSNEDGKGRALDIEGGKLIRNEDEPSGKGSDLAVRELFYNTPARLKYMKSVQTELGHISDTMYRVALAHPSISFTLHHNGNQLLHTLGNGDLLQVIAAVYGTSAAKAMLPLAAEDPDYRISGYVSRPEWTRSNRNAVTTIVGGRYIRSNGLNAAIMRAYHTLLPINRYPLLVLQLEMHPSLVDVNVHPAKLEVRFSKEAELYAFVEQEIRKVLLGQSLIPRPSKEIIGAKGSSSFIQEQFAFPKGAVPPPPQEEALGRSAAEPGYPRTGPAPTPGGAVPVSGAGGSGPLRSPGPLSSLPLQPLEGVRSGGNDAPLPGAAAGGAAPYSSSPGLDSQSRERAAAYSGSAPQAAAQRREGAGSESYRQYPPVNSARGQQPSAEELYAPPGTGDAGLPQFPELNYIGQHHGTYIIAQNDSGLYLIDQHAAHERVNYEYYYEKFGRPEDASQELLLPITLEFTPSESKQLSERLHWFQQAGVYLEHFGGQTFLVRSLPYWFPEGDEKAVIEEMAEWVLSERSIDLAKLREKSSILCSCKASIKANQKLTEHEVESLLSRLAACRQPYTCPHGRPIVVSFSAYDLEKLFKRVM
>NZ_CP048429.1|WP_062528502.1|5919736_5920744_-|ABC-transporter-substrate-binding-protein
MKLRKKISLPLMILTLSLSVLAGCGSDSAGVKVKIGEVTRSVFYAPEYVALSQNFFKDEGLEVELQTIPGGDKTMTALLSGAIDVALVGSETSIYVYQQGADDPVINFAQLTQRDGTFLFAREADANFNWDKLKGSTFLGQRKGGMPQMAGAFTLLQKGIDAGKDLTLIQNIDFANIAGAFASGTGDYVQLFEPTASIFEREQRGRVVASFGVESGYLPYTVFMSKQSYISKNGDTVQKFTNAVRRAQVWVKEHSPEEIADAILPYFENTDRDIVISSVKRYKEQDTYAVNPVIDGKEWNNLLDVMDNAGELKERIPEAKIVDNSFAEKAEAGVK
>NZ_CP048429.1|WP_062528503.1|5920902_5921214_+|helix-turn-helix-transcriptional-regulator
MNTNLIFKALSNEVRAQILEWLKEPDENFGPQIFLPPDSDFRGGICVGSIQEKAGLAQSVISSYLTLMKNVGLLESKRFGQWTYYRRDEEKIKAFAEYVKTQL
>NZ_CP048429.1|WP_062528504.1|5922515_5923184_-|hypothetical-protein
MNNNDMIHLAHFLFPETSGNQEVEGVLQKAASADRICRLKFSEGEYTQDLCLQVFKDTVLLSHLKDTDVFNRELKTPEEIKRASFYLLNCFQLTYSSPSDSPALLMSRRKYEELQEQTDAYTLYLLTERLTAETGDVVNSPQLANVMKCPTAEGELKLCSLHEGTWSFQRASYMENSSGGWLVRVSGEAAEDWMIAVPLTRPQLCSIFYRWLLQRSEASNPE
>NZ_CP048429.1|WP_025704561.1|5923321_5923561_+|hypothetical-protein
MRMLITFQNKIVPVYFTTENKQPTQKVLRLLNSTLELKIQKGKSALQKCLNSLISIEIKGSEAILHSYSENDSLALSLY
>NZ_CP048429.1|WP_167523072.1|5923661_5923802_-|hypothetical-protein
MSIDRFIIKKLDSCQEEHTRRNLVKLFKLRIQKAEKQENKYPERIS
>NZ_CP048429.1|WP_062528505.1|5924112_5924739_+|FMN-dependent-NADH-azoreductase
MSKVLFIKANNRPADQAVSVQLYNTFLASYKETHPQDQITELDLFAEQLPYYDNTLITGIYKAAQGYEATPEEAAGAATVKKYVDQFLAADKVVFAFPLWNMTVPAVLHTYIDYLSQAGVTFKYTAEGPVGLITDKKAAILNARGGVYSEGPAASAEMAVNFVSGILGFWGFKETTQVIIEGHNQNPQQSADIIAKGLELAKTAAASF
>NZ_CP048429.1|WP_062528506.1|5924930_5926019_-|ribosome-small-subunit-dependent-GTPase-A
MTIEQYGWNKNWQSKWNERLIGNEGKEYVPGRIVGDFGSKYRVMAENGETWGELAGKLRHSLTGSGEYPAVGDWVVLAMQDGGEHAVIHGVLPRHSVISRKVAGNTLEEQIVASNVDTLFLVSALNDDFNVRRMERYLIMAWNSGANPVILLTKSDLCPDAERKIAEMERVAPGVAIHAVSALQGDGRDELLPYISEGQTVALTGSSGCGKSTMVNWLSGRNLQLTQDVREDDSRGRHTTTHRELFVLPDGGIIVDTPGMRELQLWEDEGGLDLAFGDITRLAAECRFGDCRHEHEEGCAVLEAVASGELEEKRLLNYRKTQRELKYQSSKEVKQKRKTAAATKAGSSRTRNSSWRYELDEY
>NZ_CP048429.1|WP_062528508.1|5926530_5927202_-|HAD-family-hydrolase
MKEVQALLFDLDNTLMDRDHTFRSFTRKFVQDFLGHMDPEEAERTVEDIIVRDADGYRNKDGFFAELSEVLPWKKKVTAADIRAYYDRTYITHGALMKHAVEMLEYCRERGYTLGLVTNGQKDIQDGKIDLLKLRDYFKAIVISGEAGISKPNPEIYRLALERLETTAEKTLFIGDHPVNDIWGAAKAGMETIWLKRNHPWDEKLDAHPWKTIHELDELKSIL
>NZ_CP048429.1|WP_062528509.1|5927339_5927798_-|DUF3939-domain-containing-protein
MIFKRAKKNTPTVPLTVTLPQIKQAVRQFEEDMPAPINRTALIMEDKSIDLSRLKRYLGGVPEQKFYMSRETFEIFEESDKLVPYYLDLVQSAVDNYISDTGKLPLVEDAWLPEVHYRLLATERYLKETPPFPLYITEEEMMLTHRPEHFES
>NZ_CP048429.1|WP_062528510.1|5927919_5928516_-|metalloregulator-ArsR/SmtB-family-transcription-factor
MQLEKIVNYHKALSDPTRLRILLLLSKGEVHGQALAEKLNLSQPTVTHHAAKLREAALIKERRDKNTVYFALNPEFIQAGSEASLKFIFAKGVEELEEVSPDARLKESVLRNFFAKDGRLRQIPSQYKKKLIALQYMIEKLEPGVVYTEKEINDFIKPFHEDYATIRREFIMHQFMYREKDHYELNPPELWTHWENVK

Crispr_ID: NZ_CP048429_33

• CRISPR_ID: NZ_CP048429_33
• CRISPR_location: 6159143-6159218
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_33

Consensus_repeat	Method
AAGTGGAAAAAGTATCACTAATTG	CRISPRCasFinder

spacers of NZ_CP048429_33

>33.1|6159167|28|NZ_CP048429|CRISPRCasFinder
AGTCCAACACTTAGAACTTGGCAGACTT

CRISPR arrays and Neighbor proteins around NZ_CP048429_33

CRISPR arrays

The CRISPR arrays of NZ_CP048429_33

>merge|NZ_CP048429|33|6159143-6159218|CRISPRCasFinder
AAGTGGAAAAAGTATCACTAATTGAGTCCAACACTTAGAACTTGGCAGACTTAAGTGGAAAAAATATCACTAATTG

>NZ_CP048429|33|29|6159143-6159218|CRISPRCasFinder
AAGTGGAAAAAGTATCACTAATTG	AGTCCAACACTTAGAACTTGGCAGACTT
AAGTGGAAAAAATATCACTAATTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_019910375.1|6161864_6162209_-|50S-ribosomal-protein-L19	unknown	unknown	gnl|CDD|235418
NZ_CP048429.1|WP_062523213.1|6156172_6156559_-|YraN-family-protein	unknown	unknown	gnl|CDD|237119
NZ_CP048429.1|WP_062523193.1|6165137_6166004_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|225117
NZ_CP048429.1|WP_157243796.1|6162357_6162654_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062523205.1|6160159_6161020_-|ribosome-biogenesis-GTPase-YlqF	unknown	unknown	gnl|CDD|236570
NZ_CP048429.1|WP_062523215.1|6155623_6156040_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062523223.1|6151983_6152448_-|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP048429.1|WP_039836538.1|6150474_6151632_-|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl|CDD|234813
NZ_CP048429.1|WP_062523219.1|6153126_6154896_-|YifB-family-Mg-chelatase-like-AAA-ATPase	unknown	unknown	gnl|CDD|223679
NZ_CP048429.1|WP_062523209.1|6156854_6159011_-|hypothetical-protein	unknown	unknown	gnl|CDD|236090
NZ_CP048429.1|WP_062523197.1|6162939_6163887_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_020432328.1|6164458_6164656_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062523211.1|6156555_6156858_-|FhlB-domain-containing-protein	unknown	unknown	gnl|CDD|225166
NZ_CP048429.1|WP_062523191.1|6166040_6166616_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062523224.1|6149513_6150443_-|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|180194
NZ_CP048429.1|WP_062523203.1|6161049_6161670_-|signal-peptidase-I	unknown	unknown	gnl|CDD|274044
NZ_CP048429.1|WP_062523217.1|6155097_6155607_-|hypothetical-protein	unknown	unknown	gnl|CDD|277336
NZ_CP048429.1|WP_062523207.1|6159346_6159964_-|ribonuclease-HII	unknown	unknown	gnl|CDD|260003
NZ_CP048429.1|WP_062523221.1|6152595_6153024_+|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl|CDD|274649
NZ_CP048429.1|WP_062523195.1|6163978_6164230_-|hypothetical-protein	unknown	unknown	gnl|CDD|179358

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_019910375.1|6161864_6162209_-|50S-ribosomal-protein-L19	gnl|CDD|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.22539e-72
NZ_CP048429.1|WP_062523213.1|6156172_6156559_-|YraN-family-protein	gnl|CDD|237119	PRK12497, PRK12497, YraN family protein.	1.34813e-40
NZ_CP048429.1|WP_062523193.1|6165137_6166004_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	5.65078e-32
NZ_CP048429.1|WP_062523205.1|6160159_6161020_-|ribosome-biogenesis-GTPase-YlqF	gnl|CDD|236570	PRK09563, rbgA, GTPase YlqF; Reviewed.	1.80409e-156
NZ_CP048429.1|WP_062523221.1|6152595_6153024_+|organic-hydroperoxide-resistance-protein	gnl|CDD|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	5.98073e-66
NZ_CP048429.1|WP_062523223.1|6151983_6152448_-|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.01647e-22
NZ_CP048429.1|WP_039836538.1|6150474_6151632_-|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl|CDD|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP048429.1|WP_062523219.1|6153126_6154896_-|YifB-family-Mg-chelatase-like-AAA-ATPase	gnl|CDD|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	1.1172e-141
NZ_CP048429.1|WP_062523209.1|6156854_6159011_-|hypothetical-protein	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	3.25721e-14
NZ_CP048429.1|WP_062523211.1|6156555_6156858_-|FhlB-domain-containing-protein	gnl|CDD|225166	COG2257, COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown].	3.65345e-29
NZ_CP048429.1|WP_062523224.1|6149513_6150443_-|succinate--CoA-ligase-subunit-alpha	gnl|CDD|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP048429.1|WP_062523203.1|6161049_6161670_-|signal-peptidase-I	gnl|CDD|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	1.09233e-49
NZ_CP048429.1|WP_062523217.1|6155097_6155607_-|hypothetical-protein	gnl|CDD|277336	cd07390, MPP_AQ1575, Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.9171e-33
NZ_CP048429.1|WP_062523207.1|6159346_6159964_-|ribonuclease-HII	gnl|CDD|260003	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like. This family includes mostly bacterial type 2 RNases H, with some eukaryotic members. Bacterial RNase HII has a role in primer removal based on its involvement in ribonucleotide-specific catalytic activity in the presence of RNA/DNA hybrid substrates. Several bacteria, such as Bacillus subtilis, have two different type II RNases H, RNases HII and HIII; double deletion of these leads to cellular lethality. It appears that type I and type II RNases H also have overlapping functions in cells, as over-expression of Escherichia coli RNase HII can complement an RNase HI deletion phenotype. In Leishmania mitochondria, of the four distinct RNase H genes (H1, HIIA, HIIB, HIIC), HIIC is essential for the survival of the parasite and thus can be a potential target for anti-leishmanial chemotherapy. Ribonuclease H (RNase H) is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication and repair.	1.10911e-101
NZ_CP048429.1|WP_062523195.1|6163978_6164230_-|hypothetical-protein	gnl|CDD|179358	PRK02001, PRK02001, ribosome assembly cofactor RimP.	0.00100577

Protein sequences

>NZ_CP048429.1|WP_062523209.1|6156854_6159011_-|hypothetical-protein
MNIGSLIRGLLGDNKMGEPKSVELKEGQVVRGVVLSVSESGREAVVQIQGTPVRAELETPLQPGQTLNLQVAPPGDGGLPVLKPVSNGEAILASPQSMGEALESLGLTDSKAGKEIIQAMVSGGIALTKETAAKLEAVMNAKPPNVPVSEWLEAAVISVKRGLPVTAESVRGLQQAVFGPKLHQLVAQLETAIGLWVQQENDTAGGSTAPGSSSQPASSISAGTAPAPAVSVGGTAAAPAAPATPAAGQAEGVDVSRAPAAPGESVSADEAAELPGKTPAGALKTEPPAGNAAAAPAGNPTADAEPPVAASANRTGVAPAQPPVDGDAAEAAAAPKAGNAQPSAAGLAAAAGGVVPSAEPAEGLEPRSVPQPERSAVPAAETSAAGKGAALLAKLQGVLTELRGTLPQLAAAPPADAAGPAPAPAAAQPQQGTTAPPAAAGQEPAPAPAGQRGDSPSAAVAQQTGTAPAAPTDTESWVGRVLKLLGAEHEQQAVRSGAQQQPQLAVAPPADAAGHAPKAALPQAALASAAEGGDTAADTLKGVLLQVLGSSEVPPAVKEAAGQLVQQLTGQQLLLNTDRTAPFAQVTMFLPLRGPDGQETASVHIQSRRGRRGELDAANCRLWFDLDMKQLGQTLVDVQVVDRIVSLKLHNDTPWVLELLEERKDEIGAAVESIGYQLLSLRTEPLPQPSAASASVAGHAGKLADYVPDSYKGVDYRI
>NZ_CP048429.1|WP_062523211.1|6156555_6156858_-|FhlB-domain-containing-protein
MSEPADEISPNLKKAVALKYSPGQSEAPVVVAKGQGAVADRILQMAKDSGVAVQEDAALVEVLSKLDLDQQIPPQLYQLVAEILSYVYQSDRAAAERRLK
>NZ_CP048429.1|WP_062523213.1|6156172_6156559_-|YraN-family-protein
MSGGPPEEAYSRKQKGAAGEKAAVQYLSAQGYKIIDRNWRCRSGELDIIAEYGEVLIFVEVRSRSGSPLQGTPEESVDERKIRQVRATAQVYLHMKSQEERRVSFDVITVMLNEDLGITSLHHIREAF
>NZ_CP048429.1|WP_062523215.1|6155623_6156040_-|hypothetical-protein
MKNQPFNIQVSFTCQYCDNKIAVELDGEPVSVVCCSKCNKTFTVMRPAIAEEILIDWENEALFQKIRAEKTQSSNSSLLSLVIRVIELLTWRDKGNGQVEAIKEMRQWLIEHEEVPPLAELIKLDTNSQRSAKRNWND
>NZ_CP048429.1|WP_062523217.1|6155097_6155607_-|hypothetical-protein
MPDVFFTSDQHFGHKLIIDFESRPFSSVEEMDQVMIGKWNAVVGAEDTVFHLGDFSFLNMERTRDIVSSLNGYKILVLGNHDRSRGRNWWLKAGFNEVSEYPIVYKDFFFLSHEPMYMNKHMPYVNVHGHIHGQKYEGNNHFNICVEHWDYTPLSFSQITDRVVVKEES
>NZ_CP048429.1|WP_062523219.1|6153126_6154896_-|YifB-family-Mg-chelatase-like-AAA-ATPase
MYGKMHSACLYGIEGVMIGVEIDLANGLPQTSIIGLPDSAIREAVERVRAAVKNCGYRYPQQRVTINLAPADLRKEGSAFDLAIALGILTTSGQLVMPDAENLLLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYAAEHLRELPLPQAKGEPLYAPRKRKQHKPEPKKASDAAGFGCLPEIPSAAAAESSVVPSPALQSGLPFPVTVSSGPAVQEQALVNVLTLEHLKYTAQYKQSNSCSTVENLMKEDYSDVLGQNHVKRALMIAAAGMHNIVLIGPPGTGKTMLIKRLPGILPELCDRESLEVTKIFSAAGKLKDARSGLMRSRPFRSPHHTISAAGLIGGGGVPKPGEVSLAHRGVLFLDELPEFSRNVLEVLRQPLEDGVVTISRARASFTFPAQFLLACSMNPCSCGYLGSTGTHLRCTCSPAKIAQYRGKISGPLLDRIDMQVDVPRPTDWEGQGPSLSSAEMRSEVLKVQAVQAERYRSLPISWNSELSGAALRHYARLQKDGRELLNDILENLGLSMRAHDRIIKLARTIADLEGAADISSAHLAEAVQYRNLDRQVVMDE
>NZ_CP048429.1|WP_062523221.1|6152595_6153024_+|organic-hydroperoxide-resistance-protein
MMTIQQKMYETTVKAVGGRNGYIESESPKLNLTISTPREMGGAGGEGTNPEQLFAAGYSACFDSALNMVARLGKVKIEGSEVTATVSFGKVEDGGFGIAVKLDVLVKGVDKETAARLVEAAHGACPYSRATRGNIVVKLNVL
>NZ_CP048429.1|WP_062523223.1|6151983_6152448_-|MarR-family-transcriptional-regulator
MQETNTTPELLLENQLCFTIYACSREFTKLYQPHLDKIGLTYSQYLVMLVLWERNQCTVKELGEALFLDSGTLTPLLKRLQAAGLILRERSLQDERKVLISLTEQGRKLKSEAACIPGKMAEGTMLSADEFVGLLGQFKDLLARVHEANTQTAK
>NZ_CP048429.1|WP_039836538.1|6150474_6151632_-|ADP-forming-succinate--CoA-ligase-subunit-beta
MNIHEYQGKEVLKKYGVAVPNGKVAYTVEEAVEAAASLGTPVVVVKAQIHAGGRGKAGGVKVAKSSEEVRAYAEEILGKTLITHQTGPEGKVVKRLLIEEGCQIVKEYYIGLVVDRGSGRVVMMASEEGGTEIEEVAATHPEKIFKEIIDPAVGLQTFQARKLAYSIAIPTELVNKAVKFMQALYLAFVDKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALFRHKDILELRDLDEEDVKEIEASKFDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVGGGATTEKVTEAFKIILSDDKVNGIFVNIFGGIMRCDVIASGVVEAARQLGLTKPLVVRLEGTNVALGKEILAGSGLNIVAADSMADGARKIVALV
>NZ_CP048429.1|WP_062523224.1|6149513_6150443_-|succinate--CoA-ligase-subunit-alpha
MSILVDKNTKVITQGITGSTGLFHTKGALDYGTQMVGGVTPGKGGTTVNITLENGKEVSLPVFDTVVAAKAATGATASVIYVPPAFAADSIMEAVDAGLELVICITEGIPVLDMVKVSRFMEGRSTVLIGPNCPGVITPGECKIGIMPGYIHMPGYVGVVSRSGTLTYEAVHQLTERGIGQSSAVGIGGDPVKGSEFIDILKLFNEDPGTKAVIMIGEIGGTAEEEAAEWIKENMTKPVVGFIGGVTAPPGKRMGHAGAIISGGKGTASEKIAVLESCGIKVAPTPAEMGSTLVKVLEERGILNAFTTH
>NZ_CP048429.1|WP_062523207.1|6159346_6159964_-|ribonuclease-HII
MDMLSYEKECWEQNYCRIAGVDEVGRGCLFGDVVAAAVILPEGLIIEGVDDSKKLSAKKREMLFELIMDQALAVSVGHVDSVLIDKINIKQASRLAMRKAVEGLECPPDYMLIDAEKVDLPLPQQAIIKGDANSQSIAAASIVAKVTRDRLCEGLWEELYPDYGIKIHKGYATKLHREQLMALGPTPMHRRSFLGKILSDEPALF
>NZ_CP048429.1|WP_062523205.1|6160159_6161020_-|ribosome-biogenesis-GTPase-YlqF
MAIQWFPGHMTKARRQIEDKLKLIDVCIELLDSRLPLSSRNPMIDDILRDKPRLIILNKADLADPEATRKWLAFFKAEGHVAHPVDAATGTGIKEIPEQVKLLLKDKIDRQIAKGMNPRPSRALIVGIPNVGKSTLINRMAGKNIAATGDRPGVTKGQQWIKTGGNLELLDTPGILWPKFEDQEVGYRLAVTGAIKEEILNIEDIAFFAVKYLVKDYGASFQERFGIEKLPEDLENPDEIVAVMEAVGRKRGCLISGGRVDLEKASRILLHDLRAGKLGRFTLETP
>NZ_CP048429.1|WP_062523203.1|6161049_6161670_-|signal-peptidase-I
MQQDLQQGQGEIVEPDGKNPRKPKNEVLEWIKAIAIALVLVILIRWLLFKPFIVDGPSMQPNFHTGERVIVNEILYDIRSPQRGEVIVFHVPSEGRDFIKRVIGVAGDTVKVEGDVVTVNGQPVNETYIQGAIDEAHNNNALYNDKNFPNEKFTDGTVPEGHVFVMGDNRSDSTDSRMIGYVPLSDIVGRADLIFWPVKDISVINH
>NZ_CP048429.1|WP_019910375.1|6161864_6162209_-|50S-ribosomal-protein-L19
MNILQAITQEQLRKDIPSFRPGDTLKVHVKVIEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPINSPKIEKIEVARRGKVRRAKLYYLRDLRGKAARIKEIRR
>NZ_CP048429.1|WP_157243796.1|6162357_6162654_-|hypothetical-protein
MMQMQYAAIVVVLLVGVIVYFGYRSRKGQPSDPKRSTASNVISMERHRKAKQSAVEQPCSSCKKKNGKLIFYAQDNGTVVGLCKDCKAKAKKRDMLPL
>NZ_CP048429.1|WP_062523197.1|6162939_6163887_+|hypothetical-protein
MNRNHNIAKLAAIAVLSIAMLSGCRELPGKEAADNQLEQRLTGNSQQETAETFKQGLSEVTSNVEQAVQNTAAKVADELNSDSMSKELVTSRKADSSSAIILENSVGEVKITSGGSDSITVKATVVTHLGLNQETERKILDNAEVTIQADGDELKVSTHAKNEPKKDLWAWAQKKYGASNFTIDYEIEVPAAIDEYDISNNVGKIQLQSLQGTFHIASDVGAIVMDNTQFSGKSTVESNTGSIKLDILGMETGSSLKARSDIGKVTAELEGSLKCTVSAKTELGHIKGTGAGNTDINGGGPLVSLSTQIGSITVQ
>NZ_CP048429.1|WP_062523195.1|6163978_6164230_-|hypothetical-protein
MEAYYNCLHCMNKKVRILTTDGKRHEGIIVDVDRNNVYLKTKGNGKMKTSAFNPYGNYYGGFYGYGSEILTLSLFTLLAIALI
>NZ_CP048429.1|WP_020432328.1|6164458_6164656_+|hypothetical-protein
MSAAGKRFINEGVLRIAWFIIFASLTYTVRNYTWVVVLFSAVALYALGSGIVMLARDHREQRGRA
>NZ_CP048429.1|WP_062523193.1|6165137_6166004_+|helix-turn-helix-transcriptional-regulator
MIHKSIDFIEQHLDEELNLDRIAREAGFSKFHFHRIFQKYVGKSPAEYIRTRKLSSAARLLLYSEERILDIAVHYGFESQEAFTRAFKRLYALPPAEYRAQMKLLIQEREEFTMSEIKGWLITGTAPGNYKVSLDMQIYHGGRNSVSLERTAVDSPDEAEFGTLMQQFDAKNYFGKRMRFAGFIRTCEVSGWCGLWMRIDDKLQNLLGFDNMQYRNIKGTNDWNYYACVLDIPEEAACINIGILLTGSGKVWLDDCTFEAVGTDIAVTDIRTRTENFPLEPQNLKFEA
>NZ_CP048429.1|WP_062523191.1|6166040_6166616_+|hypothetical-protein
MFVFIVEIIKIAIQFIADLLSGELPGYFYIWCGVFLVYAFIYACLEMRTRLTAAELAESFFLECASHLAGWIIGILAARVTVYLIEDGISQHHKLVLYKIGLLLLISYDFTAIFSGLTNKAFARRNIAEICTFIVGMATTYLLFMLCRDSILQGLILSQTYVVTLSMLSGIFALLYKISLRSAEAPKNSQL

Crispr_ID: NZ_CP048429_34

• CRISPR_ID: NZ_CP048429_34
• CRISPR_location: 6735256-6735353
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048429_34

Consensus_repeat	Method
GGTGCCGCGCAGAGGCATGGAGGTTCTAT	CRISPRCasFinder

spacers of NZ_CP048429_34

>34.1|6735285|40|NZ_CP048429|CRISPRCasFinder
CCTGCACATACATTTTCACGCTTATATTTGCATCCTCTAA

CRISPR arrays and Neighbor proteins around NZ_CP048429_34

CRISPR arrays

The CRISPR arrays of NZ_CP048429_34

>merge|NZ_CP048429|34|6735256-6735353|CRISPRCasFinder
GGTGCCGCGCAGAGGCATGGAGGTTCTATCCTGCACATACATTTTCACGCTTATATTTGCATCCTCTAAGGTGCCGTGCAGAGGCATGGAGGTTCTAT

>NZ_CP048429|34|30|6735256-6735353|CRISPRCasFinder
GGTGCCGCGCAGAGGCATGGAGGTTCTAT	CCTGCACATACATTTTCACGCTTATATTTGCATCCTCTAA
GGTGCCGTGCAGAGGCATGGAGGTTCTAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048429.1|WP_062527770.1|6730015_6730588_-|NUDIX-hydrolase	unknown	unknown	gnl|CDD|239516
NZ_CP048429.1|WP_020426438.1|6744417_6744987_+|thymidine-kinase	unknown	unknown	gnl|CDD|235272
NZ_CP048429.1|WP_157243862.1|6728428_6728575_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062527762.1|6736746_6737778_-|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	unknown	unknown	gnl|CDD|223997
NZ_CP048429.1|WP_062527755.1|6740433_6742281_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP048429.1|WP_062527764.1|6733145_6734681_-|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl|CDD|237001
NZ_CP048429.1|WP_163704444.1|6727025_6728219_-|IS256-family-transposase	unknown	unknown	gnl|CDD|307151
NZ_CP048429.1|WP_062527766.1|6732368_6733091_-|lipoyl(octanoyl)-transferase-LipB	unknown	unknown	gnl|CDD|319743
NZ_CP048429.1|WP_062527748.1|6745132_6745387_-|hypothetical-protein	unknown	unknown	gnl|CDD|378182
NZ_CP048429.1|WP_062527759.1|6738094_6739516_-|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl|CDD|235660
NZ_CP048429.1|WP_062527746.1|6745433_6745952_-|DinB-family-protein	unknown	unknown	gnl|CDD|378981
NZ_CP048429.1|WP_020429640.1|6732187_6732289_+|stressosome-associated-protein-Prli42	unknown	unknown	unknown
NZ_CP048429.1|WP_062527768.1|6730963_6732091_-|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349932
NZ_CP048429.1|WP_025706662.1|6735756_6736743_-|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl|CDD|223101
NZ_CP048429.1|WP_062527753.1|6742261_6744007_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP048429.1|WP_157243861.1|6730665_6730839_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062522167.1|6726474_6726798_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062527751.1|6744025_6744232_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048429.1|WP_062527757.1|6739682_6739988_+|DUF2627-domain-containing-protein	unknown	unknown	gnl|CDD|378560
NZ_CP048429.1|WP_062527772.1|6728831_6730025_-|hypothetical-protein	unknown	unknown	gnl|CDD|224297

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048429.1|WP_062527770.1|6730015_6730588_-|NUDIX-hydrolase	gnl|CDD|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	3.16503e-52
NZ_CP048429.1|WP_020426438.1|6744417_6744987_+|thymidine-kinase	gnl|CDD|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	4.52186e-110
NZ_CP048429.1|WP_062527755.1|6740433_6742281_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP048429.1|WP_062527772.1|6728831_6730025_-|hypothetical-protein	gnl|CDD|224297	COG1379, COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only].	5.04308e-111
NZ_CP048429.1|WP_163704444.1|6727025_6728219_-|IS256-family-transposase	gnl|CDD|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	1.10064e-103
NZ_CP048429.1|WP_062527766.1|6732368_6733091_-|lipoyl(octanoyl)-transferase-LipB	gnl|CDD|319743	cd16444, LipB, lipoyl/octanoyl transferase. Lipoate-protein ligase B is a octanoyl-[acyl carrier protein]-protein acyltransferase the catalyzes the first step of lipoic acid synthesis. It transfers endogenous octanoic acid attached via a thioester bond to acyl carrier protein (ACP) onto lipoyl domains, which is later converted by lipoate synthase LipA into lipoylated derivatives.	3.43782e-81
NZ_CP048429.1|WP_062527764.1|6733145_6734681_-|2-oxo-acid-dehydrogenase-subunit-E2	gnl|CDD|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	1.25604e-137
NZ_CP048429.1|WP_062527748.1|6745132_6745387_-|hypothetical-protein	gnl|CDD|378182	pfam09413, DUF2007, Putative prokaryotic signal transducing protein. This is a family of putative prokaryotic signal transducing proteins of Pii-type.	0.00192028
NZ_CP048429.1|WP_062527759.1|6738094_6739516_-|dihydrolipoyl-dehydrogenase	gnl|CDD|235660	PRK05976, PRK05976, dihydrolipoamide dehydrogenase; Validated.	0
NZ_CP048429.1|WP_062527746.1|6745433_6745952_-|DinB-family-protein	gnl|CDD|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	8.19132e-19
NZ_CP048429.1|WP_025706662.1|6735756_6736743_-|alpha-ketoacid-dehydrogenase-subunit-beta	gnl|CDD|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	0
NZ_CP048429.1|WP_062527753.1|6742261_6744007_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.99469e-149
NZ_CP048429.1|WP_062527762.1|6736746_6737778_-|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	gnl|CDD|223997	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion].	3.59731e-146
NZ_CP048429.1|WP_062527757.1|6739682_6739988_+|DUF2627-domain-containing-protein	gnl|CDD|378560	pfam11118, DUF2627, Protein of unknown function (DUF2627). This family is conserved in the Bacillaceae family. Several members are named as YqzF. The function is not known.	3.41824e-29
NZ_CP048429.1|WP_062527768.1|6730963_6732091_-|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|349932	cd05683, M20_peptT_like, M20 Peptidase T like enzymes specifically cleave tripeptides. Peptidase M20 family, PeptT (tripeptide aminopeptidase; tripeptidase)-like subfamily. This group includes bacterial tripeptidases as well as predicted tripeptidases. Peptidase T acts only on tripeptide substrates, and is thus called a tripeptidase. It catalyzes the release of N-terminal amino acids with hydrophobic side chains from tripeptides with high specificity; dipeptides, tetrapeptides or tripeptides with the N-terminus blocked are not cleaved. Tripeptidases are known to function at the final stage of proteolysis in lactococcal bacteria and release amino acids from tripeptides produced during the digestion of milk proteins such as casein.	0

Protein sequences

>NZ_CP048429.1|WP_062527764.1|6733145_6734681_-|2-oxo-acid-dehydrogenase-subunit-E2
MSDNTKLTDVIMPQLAESLVSATIGKWLKQPGDSIEQYEPLCDLITDKVNAELPATVDGTLVELLAEEGQTVSVGEVIARIAVAAPAAPSAPAAAAPGAPAADTAPAAGNVPAAQASSRPAASRPAAPSPAPAAGRAAAPAAAFEASAPMRSRYSPAVQTLAAEHGIDLTAVPGTGLGGRITRKDVLTYLDNGGAAAAGATTAPAHAAGATGTPARAAGATAAPGAAAGQQAPEALQQPAFQVIQEEVQEALEPVRQSGLHLSETPRIPTIEVEGGRGSSSEYLIDVTPIRNTIATRMRQSVSEIPHAWTMIEVDVTNLVILRNKLKDEFKRKEGINLTYLAFLMKAVVSAIKDYPIMNSVWAVDKIIVKRDINISLAVGTEDSVMTPVIKKADQKNVAGLAREIDELAMKTREGKLRLEDMQGGTFTVNNTGSFGSILSYPIINYPQAAILTFESIVKKPVVINDMIAVRSMANICLSLDHRILDGVICGRFLQRIKDNVEGYTPDTKLY
>NZ_CP048429.1|WP_062527766.1|6732368_6733091_-|lipoyl(octanoyl)-transferase-LipB
MSSTELSLLEVSYLPLIEYGAAWELQKAAVKAIDAGTGPERLILLQHPPTYTIGSQHHPEHLLLSSEQLKEKGIALFEIDRGGDITYHGPGQLVGYPLLKLGVDGKVDLHGYLRRLEAVIIDFLAGYGIEGSRKPEYTGVWVGDQKICAIGVKFNKSKSRRGFITSHGFAFNVSAGIGEQGFQGIIPCGIAEYGVISLEECTGRSFELREVAGELVPYFLKHFPYEAAAAEEQTDVLQTD
>NZ_CP048429.1|WP_020429640.1|6732187_6732289_+|stressosome-associated-protein-Prli42
MQRQKWFRIVIYVMLLAMIASTVLFVLEPFLAG
>NZ_CP048429.1|WP_062527768.1|6730963_6732091_-|M20/M25/M40-family-metallo-hydrolase
MISQERLIQEFMELVRVDSETGNERQIADVLIEKFSALGLTAIEDDSKERTGHGAGNLFVTWPAEAGTAAPKLLFTCHMDTVVPGKNIKPSLGEDGWITSDGSTILGSDDKAGLAALFEAIRVIQEQKLAHGQIQFVITAGEESGLLGARNMDPSHLDADFGFALDSNGEVGAIAVAAPTQAKVTMQIFGKSAHAGVNPEDGISAIQVASKAISAMKLGRIDNETTANIGKFAGGGPTNVVCDHVQLDAEARSIVQEKVELQIASMREALETTAREYGAESEFRSEIIYPAFSFNEHDPVVQLAERAITSLGLTPRLFPSGGGSDANVFNGLKVPTVNLAVGYENIHTTKERIKAGDIVKVAELVVAIIKESVKG
>NZ_CP048429.1|WP_157243861.1|6730665_6730839_+|hypothetical-protein
MNNILVHTSSSAVTMVGKPEEIRAVMAGWIKQYGRDMPLAYILMLHSESRNSASKAG
>NZ_CP048429.1|WP_062527770.1|6730015_6730588_-|NUDIX-hydrolase
MKKDEINRNPALDEETLSTQPIFEGKIISLQVDTVKLPDGNTATREVVKHPGAVAVLALNQGKMLVVEQYRQPMHRTEVEIPAGKLDPGEDPLAAAGRELQEETGFHSGELKLLKSFYTSPGFADEIIHLYVTDNAQAGDMALDEDEFLEVSELTLEEAYQYIADGRIADAKTMMAVYAWNLYTLTGQWH
>NZ_CP048429.1|WP_062527772.1|6728831_6730025_-|hypothetical-protein
MALGSKLQSFYCDLHVHIGRTSAGQAVKISGSSSLTFAGIAKEAAQRKGMELIGIIDSHAPGVLADIRALLASGEMSEADGGGIAYKGTTIVLGTEIEIREPGRKECHVLAFLPDLAAMEDFSSWMGKHMRNINLSSQRLYVPARELQDEIYGRGGILIPAHIFTPHKGLYGCAAERMADLFDLERIAAVELGLSSDSEMAGYISELDPFTFLTNSDAHSLGKIGREYNLIEMEKPCFNELKLALARQEGRRISGNFGLNPRLGKYHRTYCAGCGSIADEAYATSERCPYCGSQKLVQGVFDRILAIADRGQPLIPAHRPPYHYQVPLEFIPGLGKRKLEALLAAFGTEMRILHAAGEAELAAVAGAELAAHIVKARSGTLELSSGGGGTYGKVVKG
>NZ_CP048429.1|WP_157243862.1|6728428_6728575_-|hypothetical-protein
MRGKSTFDSAVREFWEGMRGKSTFDSAVREFWEGMRGKSTLDFAASEL
>NZ_CP048429.1|WP_163704444.1|6727025_6728219_-|IS256-family-transposase
MTIVPENMLNNLFENLVIQFVKDNLESIMRAEIQEFMATEESGPNNSRNGYYPRNLHTKYGDVEELKVPRDRQSQFQTQLFEPYQRRDGWLEEAVIQMYKSGMGTRDVARFIESMFGSHYSATTVSNITATVLEDIQNWQSRPLAKRYAVIYLDGLYVKLRRGTVSGEVIYFAMGIDEEGHRQILGFYVGGQESSNGWREVLKDLYHRGAQEVLLGVFDGLPGLDAAFKEMYPKADVQHCVVHKVRATFPKIRVEHKTDVIEALKTVYTAPDEELARAAFDTVKAKWSKLYPKEIASWEEQLSTLLTFYKYPVEIHKAIYTSNPIERMNKEIRKRLKPMNSLTNMDAAEKIVYLEATAYNERFAERVVPGFGMDTVKKELSKLFDERYSMAVPPAAE
>NZ_CP048429.1|WP_062522167.1|6726474_6726798_-|hypothetical-protein
MRGKSTFDSAVREFWEGMRGKSTFDFAVREFWEEMRGKSTFDFAASELKEGMRGINTFDSAASELKEGMRGINTFDSAAGELKDGMRGENTLDLDFAVGGLPAPDGN
>NZ_CP048429.1|WP_025706662.1|6735756_6736743_-|alpha-ketoacid-dehydrogenase-subunit-beta
MAIMEYIDAIRLAMKEEMERDESVFVLGEDVGVKGGVFTTTKGLQEQFGEERVMDTPLAESAIAGVAIGAAMYGMKPIAEMQYSDFMLPATNQIISEAAKIRYRSNNDWSCPVVIRAPIGGGIFGGLYHSQCPESIFFGTPGLKIVAPYSAYDAKGLLKAAVRDPDPVLFFENKKCYKLIKEDVPEGDYTVPIGEANLLREGSDITVIGYSLPLHFAMQAAEELEREEGITAHILDLRTLQPLDREAIIAAARQTGKVLIVHEDNKTGGIGGEVAAIIAEHCLFELDAPIFRLCGPDVPAMPISPPMEKFFMLSKDKVKAEMLRLAQY
>NZ_CP048429.1|WP_062527762.1|6736746_6737778_-|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha
MESQGTVETINRHKPLGLSDGQVIDMYRYMQLGRKYDERSLLLQRAGKINFHVSGIGQEAAQVAAAFALDRENDYFLPYYRDYAFVLSVGMTTRELMLSVFAKAEDPNSGGRQMPGHFGSKRLRIVTGSSPVTTQVPHAVGFALAAKMQKKKFVSFVTFGEGSSNQGDFHEACNFAGVNKLPVIIFCQNNQYAISVPAHKQLGGKVSDRALGYGFPGVRVDGNDPLEVYRVVKEARERALAGEGPTLIEAMMYRLSPHSTSDNDLAYRTKEEVDANWAKDGIAAFRTYLTELGLWSDEQEHDLAAEYNLELKAAIEYAENAPFPKPEDTLLHVYSESDLKGGA
>NZ_CP048429.1|WP_062527759.1|6738094_6739516_-|dihydrolipoyl-dehydrogenase
MTISCDVAILGGGTGGYVAAIRAAQLGKSVVVIEMDKLGGTCLHRGCIPSKSLLRSAEVYAEIQESESYGIETSGVQLVFPKVQARKESVVEQLHQGVQFLMRKNKIQVLKGKGRIIGPSIFSPRSGAVAVELENGEMETVVSGHLIVATGSRPRVLPGLKPDGKVILSSEEALTLEELPASIIIVGGGVIGVEWASMLVDFGVQVTVVEAASQLLPLEDEEIARELLRLLKKRGVKVLTGTTVDAETCVITESGVTIEARKGEKTESLSAEKLLVSVGRVANIENIGLENTDIHFGKGVIEVNGNMQTNEPHIYAIGDCIGGLQLAHAASHEGIRAVNHLAGETLHPYHPHLVPRCVYTRPEVASVGYTEKEAKALGADVVTGKFPFSAIGKAIVYGMKDGFVKVVADRSSGDILGVQMIGPHVTDLIGEAALAQLLDATPWEIGEAVHAHPTLSEIIGEAMLAVDGRAIGF
>NZ_CP048429.1|WP_062527757.1|6739682_6739988_+|DUF2627-domain-containing-protein
MKLLTTRFIAILILVVPGLLAMKGFLMMKDDIFNYISMHGDETATPVFAWLHFGGGLLLFLAGMSFLGGWILTRDRKRNYVGPRFREKQKTPQPPSPDATS
>NZ_CP048429.1|WP_062527755.1|6740433_6742281_-|ABC-transporter-ATP-binding-protein
MFQALLEPFRHPKLNVGLGDAASFGSPGGRKPKAKAKDWSATLRRIWSYLAKRKAKLVLVLVMVLLSSGLALLGPYLISRAVDHYLEGDGGRTWGIFLITLALVYLLNSLTSWLQNIWMIEIAQETIYRMRTDLFAHLHRLPISFFNRRQQGEIMSRLTNDIENISSTLNSSAIQIFSSVLTLLGTVGVMLWLSPLLTLLTFIVVPLMILGMRWITRRTGPLFKERQRNMGELNGFIEETLSGQRIIKAFSQEERVISGFRERNTRIMLSGYWAQAISGFIPKLMNGLNNLSFAIVAGVGGLLAVRGLVTVGVIIAFVEYTRQFTRPLNDLANQWNTLLSAIAGAERVFEVLDEEAEAKDERAAVPLDHVEGTVKFSGVSFSYDGGADTLQDISFEAKPGEMIALVGPTGAGKTTLIGLLSRFYDPGKGSITLDGRDLSSIRRESLRSHMAFVLQDSFLFKGTIRDNIRYGRLDASDEEVEAAAKLANAHSFIMRMKGGYERMLSVDGSGISQGQKQLLAIARAILAGPSMLVLDEATSSIDTVTEIKIQEGLQALMKGRTSFVIAHRLGTIRAADRILVLQGGRLVQQGSHEELLQEGGLYSELVRGSSDSAAG
>NZ_CP048429.1|WP_062527753.1|6742261_6744007_-|ABC-transporter-ATP-binding-protein
MNIIFSYLKKYRAAASAALLMMVIELAVELSQPLLISKIIDDGIREQDNRIIWLWGGVLVVSAAVAFIAGVLSSFFASHASQGFAFDLRDQLYGKVQSFAYAVFSRFPTSSLITRLTADVSQLQDTIFMGLRFMTRVPLVVAGSVIMALVVHVKLGLLLAVTLPVLIVFLLWVMKKASVLFRSVQIRLDGVNSVIQENLTGIRLIRVFVRMNHEIARFAAFSGELMKSTVAALRLTETSAPLITLIVNAGILLVLWFGRIEISTGNATLGQTVAVINYSLRTIGALSALSWIMATFSRARASSQRIQEVMSADEREAKEKAAVTAREIAPIRGKVEFRQVSFRYPQSDIAVLEDITFKVQPGERVAIMGATGSGKSSLVGLIPRLYEQSSGDILVDGIPGAEMEISRLRGAIGYVPQEVLLFTGSVRENIAWGNPQATQDEIEQAAMAAQIHETVKELPHGYGTMLGQRGVNLSGGQKQRLTIARALVRKPAILILDDSTSALDAVTEGRLLAELKAMSCTTFLITQKISSTVSADLILLLDEGRLIAQGTHAELVERSELYRKINESQYREGVQYVPSIT
>NZ_CP048429.1|WP_062527751.1|6744025_6744232_-|hypothetical-protein
MTDKMEGYQEKIAALQEKGQLTAEIHSLLMEMLDEMAEMNRSNKALRRVILKGQSSSMSTRLRDALYE
>NZ_CP048429.1|WP_020426438.1|6744417_6744987_+|thymidine-kinase
MAQLFFKYGAMNSGKSIEILKVAHNYEEQGKSVLIFTPSIDNRDEVGYISSRIGLRKQAIPIDENTDIYSIVSSNLPKPHCVLIDECQFLSKDCILQLVRIVDELNIPVMAFGLKNDFQNNLFEGSKYMLIYADKIEEMKTICWFCERKATMALRVENGKPVYSGKQIQIGGNEAYYPVCRKCHKNPPL
>NZ_CP048429.1|WP_062527748.1|6745132_6745387_-|hypothetical-protein
MGLLKGILHFFIPRERTLVYTTFDQTQYFRIKGRLSAAGIPHRSRINGGMKALGQRAQYGGKASVQHDLYVRKEDEHRAAQVIH
>NZ_CP048429.1|WP_062527746.1|6745433_6745952_-|DinB-family-protein
MNQRPQPGEYSEFPARYISLVPPEGELAAVLKEQSSLMYDLLDGLSEEQGNYRYAEGKWSIKQLLGHLTDNDRIMSYRLLAIARGEKAPLPGYEENDYAEAGKFERFSLSEMVQHYKLVRQSTIALLESLPEEAWTRMGTASDNPISVRAIACVIIGHELHHLGVLKERYLK

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP048429_10	10.1|1688349|28|NZ_CP048429|CRISPRCasFinder	1688349-1688376	28	NZ_CP048429.1	245701-245728	1	0.964
NZ_CP048429_18	18.2|3155530|18|NZ_CP048429|CRT	3155530-3155547	18	NZ_CP048429.1	398847-398864	1	0.944
NZ_CP048429_13	13.1|2333340|28|NZ_CP048429|CRISPRCasFinder	2333340-2333367	28	NZ_CP048429.1	4280994-4281021	2	0.929
NZ_CP048429_19	19.2|3376136|42|NZ_CP048429|PILER-CR	3376136-3376177	42	NZ_CP048429.1	3376339-3376380	2	0.952
NZ_CP048429_24	24.1|4174094|28|NZ_CP048429|CRISPRCasFinder	4174094-4174121	28	NZ_CP048429.1	245701-245728	2	0.929

1. spacer 10.1|1688349|28|NZ_CP048429|CRISPRCasFinder matches to position: 245701-245728, mismatch: 1, identity: 0.964

tgctcgtgcaccatattccgcgcaggtt	CRISPR spacer
tgctcgtgcaccatgttccgcgcaggtt	Protospacer
**************.*************

2. spacer 18.2|3155530|18|NZ_CP048429|CRT matches to position: 398847-398864, mismatch: 1, identity: 0.944

gccggcagcaacaccggt	CRISPR spacer
gccggcagcagcaccggt	Protospacer
**********.*******

3. spacer 13.1|2333340|28|NZ_CP048429|CRISPRCasFinder matches to position: 4280994-4281021, mismatch: 2, identity: 0.929

aacctgcggagaatggggtactcgggca	CRISPR spacer
aacctgcggagaacggggtacttgggca	Protospacer
*************.********.*****

4. spacer 19.2|3376136|42|NZ_CP048429|PILER-CR matches to position: 3376339-3376380, mismatch: 2, identity: 0.952

ttgcagcacggaatgagaggtaaaagtacccttgaattctcc	CRISPR spacer
ttacagcacggaatgagaggtaaaagtacctttgaattctcc	Protospacer
**.***************************.***********

5. spacer 24.1|4174094|28|NZ_CP048429|CRISPRCasFinder matches to position: 245701-245728, mismatch: 2, identity: 0.929

aacctgcgcggaatatgatgcacgagca	CRISPR spacer
aacctgcgcggaacatggtgcacgagca	Protospacer
*************.***.**********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048429_31	31.1|5400433|27|NZ_CP048429|CRISPRCasFinder	5400433-5400459	27	MN694763	Marine virus AFVG_250M1123, complete genome	2942-2968	4	0.852
NZ_CP048429_12	12.1|2300336|28|NZ_CP048429|CRISPRCasFinder	2300336-2300363	28	NZ_AP018921	Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence	119239-119266	5	0.821
NZ_CP048429_16	16.1|2733538|28|NZ_CP048429|CRISPRCasFinder	2733538-2733565	28	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	313538-313565	5	0.821
NZ_CP048429_16	16.1|2733538|28|NZ_CP048429|CRISPRCasFinder	2733538-2733565	28	NC_023286	Streptomyces sp. F12 plasmid pFRL6, complete sequence	174738-174765	5	0.821
NZ_CP048429_16	16.1|2733538|28|NZ_CP048429|CRISPRCasFinder	2733538-2733565	28	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	241921-241948	5	0.821
NZ_CP048429_16	16.1|2733538|28|NZ_CP048429|CRISPRCasFinder	2733538-2733565	28	NC_003903	Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence	117335-117362	5	0.821
NZ_CP048429_8	8.1|1453364|27|NZ_CP048429|CRISPRCasFinder	1453364-1453390	27	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	546243-546269	6	0.778
NZ_CP048429_15	15.1|2449007|28|NZ_CP048429|CRISPRCasFinder	2449007-2449034	28	NZ_CP006991	Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence	382993-383020	6	0.786
NZ_CP048429_15	15.1|2449007|28|NZ_CP048429|CRISPRCasFinder	2449007-2449034	28	CP007645	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence	389581-389608	6	0.786
NZ_CP048429_16	16.1|2733538|28|NZ_CP048429|CRISPRCasFinder	2733538-2733565	28	NZ_CP042276	Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence	32660-32687	6	0.786
NZ_CP048429_16	16.1|2733538|28|NZ_CP048429|CRISPRCasFinder	2733538-2733565	28	NZ_CP032928	Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence	42015-42042	6	0.786
NZ_CP048429_16	16.1|2733538|28|NZ_CP048429|CRISPRCasFinder	2733538-2733565	28	NZ_CP010408	Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence	160160-160187	6	0.786
NZ_CP048429_22	22.1|4068511|27|NZ_CP048429|CRISPRCasFinder	4068511-4068537	27	NZ_CP033579	Vibrio mediterranei strain 117-T6 plasmid unnamed, complete sequence	34653-34679	6	0.778
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	MF140422	Mycobacterium phage Nicholasp3, complete genome	16788-16815	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	MN586052	Mycobacterium phage Kahlid, complete genome	16788-16815	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	MK937600	Mycobacterium phage Wigglewiggle, complete genome	16815-16842	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	NC_023732	Mycobacterium phage Rumpelstiltskin, complete genome	16789-16816	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	MN703406	Mycobacterium phage Gabriela, complete genome	16783-16810	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	NC_031124	Mycobacterium phage Gardann, complete genome	16788-16815	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	NC_022071	Mycobacterium phage Crossroads, complete genome	16783-16810	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	KX580962	Mycobacterium phage Wilder, complete genome	16788-16815	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	KU997639	Mycobacterium phage Loadrie, complete genome	16815-16842	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	KX580961	Mycobacterium phage Zakai, complete genome	16777-16804	7	0.75
NZ_CP048429_1	1.1|68257|28|NZ_CP048429|CRISPRCasFinder	68257-68284	28	MH779511	Mycobacterium phage LilDestine, complete genome	16782-16809	7	0.75
NZ_CP048429_7	7.1|1446885|29|NZ_CP048429|CRISPRCasFinder	1446885-1446913	29	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1811259-1811287	7	0.759
NZ_CP048429_16	16.1|2733538|28|NZ_CP048429|CRISPRCasFinder	2733538-2733565	28	NZ_CP020951	Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence	297852-297879	7	0.75
NZ_CP048429_16	16.1|2733538|28|NZ_CP048429|CRISPRCasFinder	2733538-2733565	28	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	1034648-1034675	7	0.75
NZ_CP048429_18	18.1|3155482|30|NZ_CP048429|CRT	3155482-3155511	30	NZ_CP035392	Bacillus subtilis strain SRCM103689 plasmid unnamed1	776-805	7	0.767
NZ_CP048429_18	18.1|3155482|30|NZ_CP048429|CRT	3155482-3155511	30	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	396238-396267	7	0.767
NZ_CP048429_18	18.1|3155482|30|NZ_CP048429|CRT	3155482-3155511	30	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	31189-31218	7	0.767
NZ_CP048429_6	6.1|1408259|28|NZ_CP048429|CRISPRCasFinder	1408259-1408286	28	NZ_CP038637	Cupriavidus oxalaticus strain X32 plasmid unnamed2, complete sequence	132833-132860	8	0.714
NZ_CP048429_18	18.1|3155482|30|NZ_CP048429|CRT	3155482-3155511	30	NZ_CP022118	Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence	48712-48741	8	0.733
NZ_CP048429_18	18.1|3155482|30|NZ_CP048429|CRT	3155482-3155511	30	NZ_AP022611	Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574	24430-24459	8	0.733
NZ_CP048429_18	18.3|3155566|30|NZ_CP048429|CRT	3155566-3155595	30	NZ_CP016620	Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence	305204-305233	9	0.7

1. spacer 31.1|5400433|27|NZ_CP048429|CRISPRCasFinder matches to MN694763 (Marine virus AFVG_250M1123, complete genome) position: , mismatch: 4, identity: 0.852

tgcttgagcatcctacgatccacatgc	CRISPR spacer
tctttgagcatccggcgatccacatgc	Protospacer
* .********** .************

2. spacer 12.1|2300336|28|NZ_CP048429|CRISPRCasFinder matches to NZ_AP018921 (Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence) position: , mismatch: 5, identity: 0.821

cacctgcggagaatagggtgctggggca	CRISPR spacer
ccgcggcggagaagagggtgctggggcc	Protospacer
*  * ******** ************* 

3. spacer 16.1|2733538|28|NZ_CP048429|CRISPRCasFinder matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 5, identity: 0.821

aggctgcggagatcggtgtgctggtgca	CRISPR spacer
tcgatgcggagctcggtgcgctggtgca	Protospacer
  * ******* ******.*********

4. spacer 16.1|2733538|28|NZ_CP048429|CRISPRCasFinder matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 5, identity: 0.821

aggctgcggagatcggtgtgctggtgca	CRISPR spacer
tcgatgcggagctcggtgcgctggtgca	Protospacer
  * ******* ******.*********

5. spacer 16.1|2733538|28|NZ_CP048429|CRISPRCasFinder matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 5, identity: 0.821

aggctgcggagatcggtgtgctggtgca	CRISPR spacer
tcgatgcggagctcggtgcgctggtgca	Protospacer
  * ******* ******.*********

6. spacer 16.1|2733538|28|NZ_CP048429|CRISPRCasFinder matches to NC_003903 (Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence) position: , mismatch: 5, identity: 0.821

aggctgcggagatcggtgtgctggtgca	CRISPR spacer
acgctgcggatttcggtgtgctggtccg	Protospacer
* ********  ************* *.

7. spacer 8.1|1453364|27|NZ_CP048429|CRISPRCasFinder matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 6, identity: 0.778

caagcttctaggcccctccaccaacat	CRISPR spacer
gcagcttctaggctgctccaccaaccg	Protospacer
  ***********. **********  

8. spacer 15.1|2449007|28|NZ_CP048429|CRISPRCasFinder matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 6, identity: 0.786

aggctgcagagatcagtgtgctgggacc	CRISPR spacer
ccgctgccgagatcagtttgctgggtac	Protospacer
  ***** ********* *******  *

9. spacer 15.1|2449007|28|NZ_CP048429|CRISPRCasFinder matches to CP007645 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence) position: , mismatch: 6, identity: 0.786

aggctgcagagatcagtgtgctgggacc	CRISPR spacer
ccgctgccgagatcagtttgctgggtac	Protospacer
  ***** ********* *******  *

10. spacer 16.1|2733538|28|NZ_CP048429|CRISPRCasFinder matches to NZ_CP042276 (Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence) position: , mismatch: 6, identity: 0.786

aggctgcggagatcggtgtgctggtgca	CRISPR spacer
gggttgcggagatcggtgtgatggttgt	Protospacer
.**.**************** ****   

11. spacer 16.1|2733538|28|NZ_CP048429|CRISPRCasFinder matches to NZ_CP032928 (Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence) position: , mismatch: 6, identity: 0.786

aggctgcggagatcggtgtgctggtgca	CRISPR spacer
gggttgcggagatcggtgtgatggttgt	Protospacer
.**.**************** ****   

12. spacer 16.1|2733538|28|NZ_CP048429|CRISPRCasFinder matches to NZ_CP010408 (Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence) position: , mismatch: 6, identity: 0.786

aggctgcggagatcggtgtgctggtgca	CRISPR spacer
acgctgcggatctcggtgtgctggtcat	Protospacer
* ********  *************   

13. spacer 22.1|4068511|27|NZ_CP048429|CRISPRCasFinder matches to NZ_CP033579 (Vibrio mediterranei strain 117-T6 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

tctgattagtgaacctttttcccacat	CRISPR spacer
gttgattaatgaacctttttcccctgt	Protospacer
 .******.************** ..*

14. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to MF140422 (Mycobacterium phage Nicholasp3, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

15. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to MN586052 (Mycobacterium phage Kahlid, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

16. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to MK937600 (Mycobacterium phage Wigglewiggle, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

17. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to NC_023732 (Mycobacterium phage Rumpelstiltskin, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

18. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to MN703406 (Mycobacterium phage Gabriela, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

19. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to NC_031124 (Mycobacterium phage Gardann, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

20. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to NC_022071 (Mycobacterium phage Crossroads, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

21. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to KX580962 (Mycobacterium phage Wilder, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

22. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to KU997639 (Mycobacterium phage Loadrie, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

23. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to KX580961 (Mycobacterium phage Zakai, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

24. spacer 1.1|68257|28|NZ_CP048429|CRISPRCasFinder matches to MH779511 (Mycobacterium phage LilDestine, complete genome) position: , mismatch: 7, identity: 0.75

tgcccgattcccctgttctccacaggtt	CRISPR spacer
ctaacgattcccctgttcagcacaggtg	Protospacer
.   **************  ******* 

25. spacer 7.1|1446885|29|NZ_CP048429|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.759

ggctcgggcaacatccgtaccccaccggc	CRISPR spacer
ggctcgggcaacatcggtaccgacctgat	Protospacer
*************** *****   *.*..

26. spacer 16.1|2733538|28|NZ_CP048429|CRISPRCasFinder matches to NZ_CP020951 (Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence) position: , mismatch: 7, identity: 0.75

aggctgcggagatcggtgtgctggtgca	CRISPR spacer
gatgtgcggcgatcgatgtgctggtgct	Protospacer
..  ***** *****.*********** 

27. spacer 16.1|2733538|28|NZ_CP048429|CRISPRCasFinder matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 7, identity: 0.75

aggctgcggagatcggtgtgctggtgca	CRISPR spacer
gctcttcggagatcgttgtgctggtgag	Protospacer
.  ** ********* ********** .

28. spacer 18.1|3155482|30|NZ_CP048429|CRT matches to NZ_CP035392 (Bacillus subtilis strain SRCM103689 plasmid unnamed1) position: , mismatch: 7, identity: 0.767

cccggtgcaaacaccggtagcaacgccggt	CRISPR spacer
aacgcgtcaaacaccggttgcaacgccgtt	Protospacer
  **   *********** ********* *

29. spacer 18.1|3155482|30|NZ_CP048429|CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.767

cccggtgcaaacaccggtagcaacgccggt	CRISPR spacer
ccgccggcagacaccggaagcaacgccggg	Protospacer
**    ***.******* *********** 

30. spacer 18.1|3155482|30|NZ_CP048429|CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 7, identity: 0.767

cccggtgcaaacaccggtagcaacgccggt	CRISPR spacer
ccgccggcagacaccggaagcaacgccggg	Protospacer
**    ***.******* *********** 

31. spacer 6.1|1408259|28|NZ_CP048429|CRISPRCasFinder matches to NZ_CP038637 (Cupriavidus oxalaticus strain X32 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.714

tacttgagctatctgttctccgcagatg	CRISPR spacer
tacttgcgctatctgttctccaagacca	Protospacer
****** **************. .. ..

32. spacer 18.1|3155482|30|NZ_CP048429|CRT matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

cccggtgcaaacaccggtagcaacgccggt	CRISPR spacer
cccggtgaaagcaccggtagcaaccgtaac	Protospacer
******* **.*************  ....

33. spacer 18.1|3155482|30|NZ_CP048429|CRT matches to NZ_AP022611 (Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574) position: , mismatch: 8, identity: 0.733

cccggtgcaaacaccggtagcaacgccggt	CRISPR spacer
atcatcgtcaacaccggcagcaacgccggt	Protospacer
 .*. .*. ********.************

34. spacer 18.3|3155566|30|NZ_CP048429|CRT matches to NZ_CP016620 (Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.7

accggtagcaaccccggtgccaacgccggc	CRISPR spacer
ggatagagaaaccccggtggcaacgccggg	Protospacer
.   . ** ********** ********* 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1079816 : 1096840	25	Thermus_phage(27.78%)	plate,holin,tail,portal	NA
DBSCAN-SWA_2	1317730 : 1331413	29	Paenibacillus_phage(18.18%)	NA	NA
DBSCAN-SWA_3	1352870 : 1361686	7	Bacillus_phage(33.33%)	holin	NA
DBSCAN-SWA_4	2354129 : 2363369	11	Caulobacter_phage(37.5%)	NA	NA
DBSCAN-SWA_5	2718818 : 2730312	9	Mollivirus(25.0%)	NA	NA
DBSCAN-SWA_6	6325254 : 6356377	26	Staphylococcus_phage(50.0%)	plate,holin,tail	NA
DBSCAN-SWA_7	6636254 : 6645388	10	Staphylococcus_phage(57.14%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP048429|1079816:1096840|DBSCAN-SWA
ATTATTTTTTGGTGGTTCCCGGGTGATCGTTGAAGGCTAATTCAAATAAACCTGTCGCGGATAATCCGGCGAGTCCCCCTGACCATAGCCGGAGCGTAAGCCCCAGATCGGTAAAAGGATACGCAGCAGCTCCAATAAGCAGCCCAATCCCAAGTCCGATAAAAGGCACCGCGTTGCGTGGCAGATTAATATTATTTTTGACCAATTGCACCAAGGCAAGCGTAAATACCGCTAATACCGATGCAAAAGCCAATACATTATCCAGAATACCGGTGTTAATCACTGGAAAATCACTCCTTTCCGTTTCGCGTTTATCGTTCAAAAATGTTAATTCTAGCGGCCACTTGTAATCTCTACGGTTCGGGTAACCGAATCATAACCAACCGAAGCTCCAAGCGCTTCCGCTACAGCACGTACCGGCACATAAGTTACACCGTTCTCCAAACGGCCATCGGCTATTTTTGCGCCATTCACTTTTACTATTGTAACCGCATCACTATTCAGATTCTGTTCCCCCTTAGTCCTTCCGTTGATTAGCTTATACGCCGCTTCCACCGCTTGTACTGAAGGCTGTGCTCCCGCCCGCAGTTTGGAAAGCGTCAATCCGAAGCTCATCTGAAAATGGGGATAATCCTTCAGACTGGTCCAGTCTCCACCCCATTCAAAACCCAGCCGTTTGGCCTGCTGCACCACCTCCAGCCAATCCGCTGTCCGGTCATTGTCTCCGTCACGCGCCATGTCCCAGGACACGCTTGAGCCATTCGGCAGCAGCAATGCAAAATCAATGGCCAGACCATAATTGTGATAGCTCTGTCCACCCCGGGCATTGGTAACAACCGCCCCCGGCTTCGTACGTCCTTGAGCATAGAGCGCATCCTGTTCAGCTATTGTCCGCAGTCCTTGCGTAATCTGGACCGGAACACCACATGTGTAGCAGCATTCGATTAACGCAGTAGCTGCTGCGAGCACGACGGGATGCAGGCCGGTTAAGCGGGGAGCGGACTTATTTTTGATTTGTGTCAGGGTCAGCATGGCTTGCTCCTCCCTTCTTGCCCTCCTGCAGAACAATGAACAAATCTTGACGTTTCGTGAACACCAATAAGGTTAGGATGAGCAGCCCAATCGTGGTTCCGGTCTGGGCAACCGCCCAGGCCTCTGTTTTGAGCGAAGCCAGCACAGTGTCTGCTCCAGACACAGCAGTGCAGCGAATCCACAAAGCGACTGCCATTTGGAAGGTGTAGGCACCCAGAAAGAAAAAAGCTGCCAGCATAAACAGGCTGACCGCCTTTGCCCGCAGACGTCTGCGAAAATACAAAAAAAGCGCAGCTATCAGCAGCAGCGCACAAATCAAAGATACCGAATATGCAATTAACCGCAAAAAATCAATTACGCCCATTGTTGACACCCCGATCATAGATTAGAAATTCGGCAAATCCGTTATTTTGGATCTCCTCCTGAATCTCTTTGGATACGTCCTTATATCGAAGGATAGAGAACATTACCCGGGCCGAGGCTTGGGTCAGCTCCCTTTCCTTTTCCCGGTGCAGGGGCGATAATCGTTTGATCCATCTACTCAGCACGTTATCCTCCCCGATCTTCTTCATTTACTACATTCACACCGCTTGACGCTTGATCAATTTTCAGTCTCTGCAGTACTTCAAGCGTGGGTGCCATGAAATCTGAGCGCTCTTTATCCAAAATATTTTGCAGACGGTCCCGGTCTTCTTCAGCCCGCTCGAGCAGTTCACGCGGCACCAGATTCCCTTTGACAATCGAGCGCAAAAGCACCAGAACAATCACCAGCAGAATCAGAGCCACGATATAAGCCAAACCATATTTATCAGCCAAGGGAAGAATCTTCTCCAAATTCGCTACGTCGTTGCTGTTCATTGTTTCACCCCTTTCTTATTGGACGTTAGATTTTCATATTAGGTCTGGTCGTAACTGCGGAGAATGTTTGGACTTCCGGCCGCTGCCCATCTGCAGATTTCTTGAATTTATACCGCTGCTCGCGGTGGAAATCCGCAGACAAAGGCGGACGCTACCGCTCCTCCAGTTCCAAACTTCTCCTCCGCCACTTTTCCCTTTTTACTCATTTTTCAAGTTCACTATATATTGATGTACAAAAACCCCCGGGACCCGGGGGCAAAATAAAAACGCCGCAGCGGGCGCCAGCATTTACCTATTCTTCTTTGGTCAAATACTCAAGTCCGCTGTCCACCAGGATTTCTTTTACGCCAGCTTTCAATGTCGCCGGAACTTCCGTGAACTTGGTCTTCCCCAAGATTACACGCTGTGCAAAAAACATAGTCATTAAAAATCACCTTCTTCCCATTTTGACCTTCAGCCACATAGAACTGGCTGGTTATTACTGATAAACCCTCGTCGCCATCTCTGCGATAATGTCCTCAATGAAATCCGCCCGCTCCGACAGAGCATTATTTTGCGCCTTCAGCAGTACATTCTCTTTCTGCAGCTGCTCGACTTCCGTCAGCTCCGGCGGCTTGTTCGCTTCAGCTTCCTGGTAGGCCTTCCAGGCTGCTTGCAGCTCTGCTTCTGTGGGCTTGGGTTTGTCCAGGTTCCAGACGGCGATATAGGGTCCACGCTCTACGATATCGTAATCCTCACCCTCAGTGAGTAGGTTGTAGTCGATACCGTAGCGATAATGGACGCCTTCGACTGGCTCCTCGCCTTTTTCCGGCGGCTTGATCTCGTAGCGGACACGGCCTTTTTCTTCGGCTCCGGGCCGCAGGACGGGTTCAGGTCCGTTATCCTGTACGATGAAATCCTGCGTTTGGGCGGCTTGAGGGTATAAGTGCATGATTGCTTGTGCTATATTCATTTTGAATCCCTCCTCATCCGATTCTATCAATATTAAGTGAACATATTGTAGGGTCTGCTAAAGTAATAATGTCTACCCCTTTTTTTTGCTCTATATATATTTCCAAATAATCCCCCGCATTTAACGGTACAGTTTTACTGCCGCCAAGAAAAATAAAAGCCCCGGGAGAGCCCACTTGATCGAAACAAAGCGTCCTACCCGCCTGACCGTTAACATAATAGTATAAACGGGTTTCAAAGTTTCCGTTAGCATTAAGCAGTAAAGATGCATCAACATGATAGAGTCCGCTTTGTTTTACTGTGAATCTACCGATACCATCATATTCCTCGCGTTGGTCCTTGTCTTCTTGCCCATAATTAATTTTTGTTCGCACAGAACTTGAAATTGTTTGCGAAGCATTATGCGCGGCTTGAACATAAGATCGAGAAGTAGATGTATTATCTCCCCATGGGTTAACAACACCGTCACCAAAAGCAATTATACCTCCCGTCTGAGTGCTGCTTATGGCTGCTGTAGCGCTCATTGTCCCAACGCTTCCCCCGATTTTTGCTCCTTCAGTCGCTAGGTAGCCATAGCCGCTGCCACTACCGCTTACACCAACTACAAATACATTTGCTCCACTACGTGCCCATATAGATGTTGTTTTATTGGAATACATCCCTCCACTTATGACAGCCCCACCACCGTATACCATAACTCCGTAATAACTGCCAGCACTTGCAGTCACATTACAGTTTTGCAACCAAGTCCATACATTACTGATCAACTCAATTGCATTGGTAGTCGTTGTAGTAGCCGTGATCCCTGTAATTGTGACCTGAATTGTATTTTCCTGCATCGACAGGCGAGTAACGTTCACGGTCCCTGAGGCATTGATTCCAAGTGTACCTCCCCCACCAAATCCCTTTAAAACAACATCCTCCGCATAGGTTCCAGCTGCGATATTAACTACAACTGCATGATTAACGTTCTGCGGGATCATGCTAACAGCCTTCCCTATCGTCCTAAACGCCCCACCCGCCGTATTCGCCAACCCATTATTGCCATCATTCCCATCCGTCCGCACATAATAGGTAATATCCGCCGTCGTCTGCTGCGGCGTTGTCGCCAAAGGCGCTTTGCTGTTCAGCTGCCCCTGTATCCCGCTGGTCACTCCATCCAAATACCCAAACTCCACATTCGACACCGTGCCGGTTCCGATCTTGCTTGCATCGATCGCTGCAGCCGCGTTAATATCCGCGTTTACAATAACCCCCGGTGCAATGGCGGTAACGCCATCTCCTGTACTGGTCACATCCCCGGTATGATTGGGATGTACATACTTATTCGCTCCGGCTGCTACACCGTCCAGCTTCGCCTTATCTGCTGCGGCCATCAGCCCGGCAGCGGTGGTGGTGGCTGCCGCCGTGGAAGCCTTAGCGTTCCAGGCGGTGCGTTCCGCCGCTGTAATATGCTTTACCGTATCCACGGTATGGTCCTGCACATTTTTAACGGCAGTATCCAAAACATCCATATTGCCGTTCAAATCGGCGATATCGACTATATCTGTGCCATCCGGCTTTTTCAGCCCCAAATTGCCCGTAGTCTGCATAGTTCACACTCCTATTCGTATACTCTTAATTCATTCCATGTTCTGGCGTGCGCTGCATTCCAGGTGAGTGACTTCAGCGAATTCCACCAGGTATAGCTGTACACAAACTTATAATCCAGATGGGCAGGCTTAATCTCTTCTATGATTTGTATTAACCCCGCCATGTTCGCCGGGATGCCCAGCGTCCCTACAAAACGCGCCTCAAAGCTGTACGCTCCCGGCACCTCCACAACCTGAACATCCCCTCCGGAAAAAGCGGACGCCGTCCGCCGGATCATCTCCGGTGTAGTCGTCCCGCTTCCGCGCAGCTTGGCCTTGATCATTTCCCTGCGGATGGCATAGGATTTCGTACTGTCCGTGGTAAGAGCCAGCACCTTCTCCCAGCGCGCAAGCCCCCAGGTTGCCGACTCCACATTCGTCTGCAATGCCGAATCCTCTATCGAATAGGCCAGCTGTCCACATTCCGCAGCATGGCTATCCTGGATCTGCTCCATCTCAAGTACACCCTGATAATACTCCGGCAGGTATTTCATCAGGTCAGGCTTGTTAAATTCCGGCCCCTCTTGTGTGGTGGGGCTGGAAGAATAGCTTATTGTCCCGTAGATATTCTCGCTATAGGCCATAGTTACACCCCTTTAAGCTGATTCCAGCTCAGCGGGCCTTTGGGCATGTACTCATGCGTATGGGCCGCTGGCGGATACACCGCCGGCTTCCCGTCTACCCCTGACCAAGGTACGGTATCCGCCGCCTGTGCGTAATCCACTTTGCCGTTGTTGTTGGTGTCATAGATGCTTTTCAGCATATCGCCGGTGCTTTGTGAAGCTACGAGCAGTTTGTTGACAGTACCCGTACCGATGTAGAGCTTGCCTGTATCGGTGCAGAAACCGAGTTCGCCGGCAGCAAGAGTTCCCAATGCGCTTTCTTGCCCGCGGCGGATTTGAATTAAAGTCTTCAGAGCCATTATCATCGCCCCCTAGAATGTGCCGCCGTCAATAGCACCCACCATCAGCCGGCTGCCATTGGCTGTGTCGTATACGATGCTGCTTCCATCGACATTGGCCGCTACACCGTTCGAATCGACGGTGATCCCTTTGCCGGCGGTCACTGCAATCGCATCGGCGGTCACACCAATCCCATAGCCTGCACCAATGTTCAGTGTCACTGAATCGGCTTGTCCGCCCCCGGTAAGGCCATTGCCGGCTGTAATCGTCTGTAATGCTCCACCCGTACGAACCCAGGTGCTGCCGTTCCAGCTGTAGATTTTCTGCTCGTCGTCAACATAAGCCGTCCAGCCCACAGCCGGTGTATAATACACCCATGCCGCAGATTGATACTCGGCAATTTGATTGGTTTTGCCCGCCCAGACGCCTGTTGCTGCCGCAGGAATAATGTAACGGTCACCCTCCGCAGGACTCGCCGGGGGAACGGCCAGATTCTGGTCCTTCACTGAACTCTGCGGCTCGATGTTATGCTTGGCCAGCTCGATCTCATTCCTGATTTTTTGTGCTGACCACAGATCGGTAATGGCCGTTCCCGCATCATTGATTACACGGTGCTTAGATGCATCGTCGATATGGGTTTTAATCTCAGCTGCAGTTTTGATATTTGTACCGTCGGAGATCTTATTAACATGTCCTGCCGTGATGTCTGCCTTAAGTACCCTGGCATAGGTTGCCCCATCGGCAACGTCATCCACTGACCCGGTCAGATCGCTCAGCTTCTGCGCATTGATCCGGCGCCAGGCCGCGCCATCGTCGAAATACAAATAGCCGCTGTTCGTTCCGCTGGTTACAATGTATACCCGCCCCGCAGAAGCGGCTGCCGGACGTGAAGCCTCCGGACCGGACATCGCCCGGCCCACCATGGAATTGGAAGTGCCGTCACCAATATAGACTTCCTTGGTATCTGTGCAAAAGCCCATCTCGCCCGCATGCAGAACTCCATAAGCAGCAAGCTCCGCCCGGGTGCCGCGTTTTACTTGAATGGTTTGCGCCATTTTACACCTCTCTTCTAAAAGATCCTCCGTCTATGCGTCCCGTTGCCTTGTAGCGTTCCAGCTCCTTTTGGGCAGCAGTCAACCCCGATTGCAGAGCATTGATGTCATCCGCTTCCACAGTATCGCCCGGTGTCTCATAAGTGACATAGACTTCAGGAACCCCGGCAAAAATCTTGATTATCCTCCGCCAAGGCGTTTCATCCGGAAAAGAAACCGAGAAATTCCGCAGCTCCACCCCGCTGTAATGAGAACCTGTATACACCGAGATGCTCTGGTTGTTAATGTTGTCATGCGCGAGCAGACCGCTGTAAACCCCATCTGTAAGTAACAGTTTCTCCTCAACAACATAGCTGCCGCCGTTTGCTTTTTTGTTCAGCTTATCCGTAAATTCATCGACCTGCTGCGGGTATCCCATCCCTACACCTCCAGCACGACACTGCTGAACAGCGGCACTTCTGTTTCACTTAAAGTCACATTACCCGATCCGCCGTTCAGCTTCAGTCCGCTATAGTCTACAACGCCCTCTGTATCCAGCAGCAGTGAGCCTATTACAGATTGGCTGATATAGGAAGCGGTAAAGGCCTTTTCCTTGCGGTATTTCTCCAGTATCTCTTTAAAAGCATCGATTACCGCCTGCAGCGTATATCCGGAAGCAAGGGTAACCTTGGCGCTCACGCTGATGCTTTTCCCGGCTGCAGCCGCTACAGTTACTACTGCTCCTACCGGCGCCTGGCCTTCACCTTGACCCGCAACTGGATCGATATATTGCTGTACCTGCGACACCAGCAGTTCGGAGGCAGGCTGCTTCGCGGCATCCACAATGACCACTTTTACCGTCTTAGGTCCATTCCATAACGGAAAAACCCGCGCTCCCCCTACGCCGTCTATTTGCAGCGCCCATTCCATATAATGATATTTGTTGCCGCTCGTTGACGGACGTCTGGCTGACTCTAAAAAACGCTGGCGCAGCTTTTCGTCATCCTCGGCATTTTCACCGGGAATCAGCAAGGCTGTTATCTCTCCTCGCGCTAGACCAGGGATATAATCAATAGGCAACAATGAGCCAAAATACCGGTTTCCTTCCTCCCCTGCTGTCTCGCTCTCTATCCTGTAGGTTCCCGGAGCCAGCTTCTCCACCGCCGTATAGTGCAGCAAATCTAGTGAAAAACGGCTGCCCAGCGGAATATCCAGCAGTTCGTTAGCGCTGTTATAGAACATTGCTGTAAGCTCGGCCTTGCTTGCGGCACGTCTGGTTATTCCCGACCAGGCAATACTGCGCTCCAAATATTCACCAGTAGCCGTATCCGCAAAAAACAGATTGCTGTTCACATCCAGTTCAATATACATCTGCGCCATCTCAGCCGCCGCCGGAGCCAGCGCATCATAGATGATGCTGCCTTCACGTTTATCCAGACTGGATGGTACCCGGTCCAGCATCCGCTCAAGCAAAGCCTCGAACGTCTGATTTTCATACACCCTCACTCATCTCCTTTCTCAGCTCGAAATTCCCGTACTGAGTAACTACCTTGCAGCTGAAGCTCAGATTATCCCCGTTAAAAGAAACCGCAGTGTCCTCCAGCCTGATAATCCGCTCATCCTGAAGCAATGCTTCACTAACAATACGCCTGATTTCAGCTCTCACCAGCAGTCTGTCTTTTCCCAGCACAAGACCCCATTCAGTCCCGTAATCAGAACTGTAGATCAGATGCTCATAGCGATCGGTCCGCAATATTTTTGCCACTGCCTGCTGTACGGCTTCAAGGCCATCCAACCGGCCCGTAATTCGTTTTTTGTCCCAATCCATTCTGTAGGTGAGACTGGACATTTCAGTGTTCTCAAAGGAGGTGTCTCCATCAGGAGTTGCGATGATAGGGCCAGCATTTCCAATTACGGGTATCATACCGGATCCACCAGCCTGTCCAGTACAACATAACTCTGCCCGCCCTGCATCCGAACCATCAGGACACGGTCACCCTTCTCCAGTCCCCGGCGCAGAACGATTTCCCTTCCATCCCATTCGAGCTTGCTCTCCATGACGGATTCGGGAAGAACCAGCGCGGCTCCTGACAAAACAAACCGCTGGTCCACCTGAATCTGCAGCGGTGCCGCCACGGTTACCGTCCCATACGAAAAAGCCACAGGGTTGGTACTCCCTACGGCGCCGAGACTCGCTTTTTTAATAATATCAAGCATTATTTCTACACCACCTTTATATCAAGAGACATGGTATGCTCCCCGCCGGAAATCTTATGGCTGCATTGCTCCACCAGAAACAGTTTGGTGTTAAGCTCATCCAGCAGCACATAAATCAGGTTGCCTGCACGCACCCGCAGATCGCCTATTGCCTGTACGGAAAGACTTGTTTTTTCCCGGTTATGCAGCTTCAGCAGGTTGTCTGCGTTCTCCCGGATCTGTGCGGCGTTCGCCTTGTCATCGGCTTTTTTGTAGAGATGCAGAATACCCCAGCGTTTCACATTCTCCGGGTCGCTGACCGGGTAGAACTCCCGCTTGCCGCTCTCTTTGTTGTCCTTATAGAGATAGATTGTATTGTAGGTATCGTCATCAATGCTTTTTTTGAGCGAATAGTCATACAGATAATGTCCAGCTCCCAGCACCAGATCAAGCTTCATCGAGTCCATCCCCCGCAGCGTCAGCTGGCCGAAGTCATCATAAAAAGCCATTAGCCGCCCCTTCTTCTCCATCTCACCGCCTATAGCCCCCATAATAATATCCAGCAGCTTCTTATCATTTTCTATTAAAGAAGGCATGCGGTATGTGGTTTCTTCAAGCACTCCGGTCTTCAATCCGTAGTCCTTGGCAATTTTTGTAATGAGCTCACTGGCTGTAACATCCTGAAGCACATAGCTCCCGTTGCCGAGCAGATAGCGGATCTGGTCATAGGCCGTCAGCTTGATCTGCTGATCACTCCCGGTATCAATGCTGAACACGAACCCGTAGAACACATTGATGCCATCTTTGCGGAACTGGACAATATCCCCATTGCTGATCTTAAACTTGGGGTGCTGATAGATGCCACTGTCGATAATCGTCATGTCCAGCGTTGCTGGTTTGCCTGCCCGGGAAGTCTTCCAGGAGAGGTCTGAGACAATGCCGGCAATATCCCACAGGAGCCCTTCTTTATTCTTCAAAAGCAATTCCATACGCTTTCCCTCCTACGGCAGCTTAAGGACTTTGCCGATGGGCAGCTTTTTCAGTTCACTGTCCTTAATGCCGTTAAGCTTCTGTATCACTTTGTATTTCTGGCCGTCACCGAGAATCTTCTTGGCAATGCTCCACAGACTGTCGCCAGCTTTCATCGTGTACGTTTTGGGGGCCGCTTTATCACTCGCCCGCTTGGGCTCTGTTTTCGCTTCACCTTTGACGATTTTTACCGGACTGGCCTGGTAGAACACATATTTTTTGAGCGACAGCGAATATTCAATATCTCCGGAGGTTCCCGCGCTAAGCTTCCAAGTAAAGCTCTCGATGCTCATGGCCATATTCAAGGCCAAATCATTCGGTACGGCGGAGTTATCCTGCTCCCCCTTTAAGGATACCCCGGACAATACAAACCGGATCGGCCTGCGGCTCTTCATCCATTTCTGGATCATCTCCACATATTCAAAGGGCCGCAGCAGCCGGTTTGGTCCCTCACTGCGCACCAGCACAAAAGGATAATGCTGCGCGGGGAAGATACTTTCAATTGTGATCTCCGTCAGCTTCGGATAGGCAATGGCATTGATTTCGCCCAAATCGACAATGGTATAGCTTTTGCTGTCTCCCGACTCTTTGATTTCCAGCGTCTCCGGATTCACAGGCAATCGGAAGAGGTCCTCCAGCTCATTAAAACTCAAGAAAAAACCGTATTCCTCCACGTTACGTATACACCCCCTGGGCCGTAGAGACAAATTCCTCATTCAGCTTTTGCCCGATCTTGTTGATGATCGTATCGATGTCCCCGGCATTGTTGATGTTCCCGGTAGTCACCTGCACCGTGGGCGTCAGCTCCACAAAGTTCTGAATGGCCTGAATCTCCGCCAGCTCGCGCATCATTTCGAGATCCTCGCTGGAGATGTCTACGGTGTCGTTGATGGTTCCGACCTCATTTACCCTGTTCACATTGTTCAGGTTGCCGCCCTGATTGGCAAAAAGACCGGCGGTGTTCTGAATCTGTTGCCCGCTTGCTGGCGGTTTTGTTAATTTCTTGGCATCGCGCCCTTTATCAGAAAATGCACTCGAAATACTTTCGACCTTGTTGTCTGTCCATTCTTTAGCCTGTGTATAGCTGGAGTTAAAAGCATCTTTCGTATCCACATACTCTTTATGCTTCGTTTCCTGCTTAGTGATATCCTCAGGAGGCTCCAGTGTTTTGAATTCTTTACGGTATTTATCCACCAGCTCGCTGGCGGCATGGGGAACCTTCAGCCCGTCCAGATCAAGCTTGATAGTGCCAATCCCCATTTTATCGAAGAAAGGAATTTTGCTTAACGCTTCAGCCATGCCGTTGAACTTGTCAACCACCCAACGGATCGCCTCTACCATAACCTTCACAAAACCATCAGCAAAGCTCTCAACACCAACCGCCATATTATAAAGGACATCCAGCGTACCCATACCTAAGCCATATAACAACTGCTTCACAAAAAGAATAGCAGTATTAAATCCATTAACAATGCCATCCCAAACCACATAAAATCCATTTTGCAGGCCTATCCAAATATTTTGGAAAACCGCCATCAACCAGCTGAACGCTCCCGCGATTGCCCCTACAACCTGCCCCGCCGATATCCCGAGATTCTGAAAGATTAATATCAGAGCCGCGATTACCGCAATCACGATTAGAATCGGCCAGTTCGCAGCCAGCCAGGCAGCAGCAAGTAAATATACCTGAACAATCATTGCCGCCAGATAGACAACCGCTATCGCGATAAGAATCGGCTCAATAATATCCCAATTCTCCTGCACCACACCAACCAGCCATAGCAATCCATCCACAATCATACCGATTACATTGGCTATCACCAGAAAGCCATTTGCCAATGCGTCAATCGTTGGGGCCAGTTGGCCGGAGGTGAGCGCTTGACTCAGTGTATCCATAACAGGCCGCAGGGCCCCCAGCGCCTTTTCACCGATTTTGCCCATTGCCGTATCCACATTTTTATTCAACTTGTTCCAGTCTGCAATATCTCCTGGTTTTACAGCAGCCTTGACTGCCTTCTCCCCGAAAGACTTAATCTTGTTGAACGGGGTAACCCAGTCCGCAGTCTTCAAAAAATTCAGTATCTTGGAATCTGGCTGTGGCGGCGTTGGAGGGGCCGGCGGAACCGGAGGCTCTTTTTTCAAATTGATCTTGGGTGTAGGTACAGGCTCAACTTTAACTTCAGGCTTCTTTTCTTCTTCCTTTTCATCCTTTTTTGCTTTCTTTTCGAACCCTTTCCACCATTCCACTTTTTTGGCCTTTTCTTCTTCCTTCTTAGCCGCCTGTACGGTTGGAGAAGCATTCAGCATACGCACCCCAAGCTGCTGGGACTGGCCGGCCTGCTGACTCTGTCCGACAACAATGTCTCTGGAGACCAGAATCTGCGGCGGCAATCGCTTGAAGCCTTCCAGCAGCGTATCATTAATATCCAGCAAAGATTGGTTGACTTTGTCCAAGGAGCGGTTTAATTCATCACTGGAGCGTGTAAGTACGGCTTGCATTCCCTTAATCGAACGATTGGCAAGATCCAGCTTAACACCAATGCGCAGGGACTGTTTATTTATCACTTTCCAGATCGCAAGCGACTTGACCGGAAGCATCACGGCTTTAGAAACATCTATTCTCATTCTTCCACCCCCTTTATCCCCTATCTTCTCTTCCCCTTGCTCCGCGATTGCTCCCGCTTCTCCCTCTCCACCCGGACAGCAATCATCGCATAGATGGCCGCGCGCTCGCGCGAAGACAGCTTCATCAGCTCATGCGGCAAAATATGCAGCTCATGGAGGGCGTAGTAAGCCAGGTTGGCCTCACTGTCGCCCCCGTTAATTAGTTTTTTACTTCTTCCACCAATTCGTTCATGTCGGTGCCGAAGCCGTTAAGGGCCTGTACCCGTTCACCAAGTGCAGCGAATTCGCCGGGGAGCAGCATTTTACGCAGTAAGGCCTCTGCACCAAGCACATTATAGGAACGCTGCAGTTCCGCATTTTTCAGATCGGGGTGAACTACGCTCGAAGTCATTAACTTGGCCATGTAGTCATTGGGATCAATCTCGGAGGTGTACACCCCACTTTTCCCCTTAACCTTGCGGGTAGCCGCCTTGCGGCATTCCTGGTTCTCATCCTCGGTCATACTGCGCAGTTTCCAGGCCACGGGTTGGCCCTCCTTATCCTTAAAGCGCTGGGAAACCACAAATTCCTCCGTTGTATCACAAGCCACATTTTGCGCAAAAAACATACTTAATTCACTCATGATGAACCTCCTATAAGTTTATGGGCTTAAGTTTTATCGGACAGACAGAGAAGAGACCCGCCGCCTGCTGCGTCCGGGCCGTTCTTGCTCAGATCTGTACTTCTCTTACTACTGCAGAGCAGGGCTGCCAAATGCCTGGGCAATCTGTACATCCTCAAAGGTAAAGCTGACTTCTTCCTCCAGCGCATCCGACTCCGTATCGAGTGAAGCCATAATCACGCTGTCCAGGTTAACACCTTTCAGAATGATCCGCTGCGCCCCGACACTCGATGATGGGTCATCATTGGTAACCTCGATATCGAAGTACTGATCCACACCTGTATGCATGTAGTCAAGCATCATTTGACGGAAACGGCTGGTCATATAAAAAATCGTCATCGTGCCGCTGCCCGACCATCCGGTTGCTTTATGCTGCACACCCCGGCGTCCGAGTGTTTTCACTTCCGCTTTTGTTTTCTCCACGGTAGCTTCAAGCGTTTTTACATAGAACATCTCTTCTGTTTGTGTGCCAATCACAGCATAAGCACGGCCTTCCTGGCCGGAAAGAGTATCGCTAGCCTTCAAAAATGCCATCTTAGACCACCTTCACTTTCATATATACTTTTTCTACCGAATCGACCGGTTTTACAGCTACATCCAGAACGATGCTGTCACTATCCGTACCGGCAGCAACCACAACATCACTCTGAGCCTTAAAATCTTCAATCGCCCCGATATTCTGCAGCTCATTCATATAAGTCGCACATTGCGACCAGAACAAGGCCCGGCCATCTTCATTATTGGCAACCTTGCCGATGTAGTATGTTTCAAAGATAGACTTCAAATCATTAGCAATCCCATCCAGCACACGGAGTACACGGTTTTTGGAAAAGGCTCTGCCTTTATCCGGTGCATAAGCCGTAAAAGTGTTGATATCCTGCTCGACAACCGCCCGGCCGCCGCTGTAAGTGAAGAGGAATTCACCGCTCAGCAGTGCCTCTGTCGTTTCAGAATGGCTGAGGCGCACATCGGCGTCTACGGCATCGTCATAGGATTGATGAGTCAGGGACTCGTTTACGGCAGCTGCTGCCGTGGCACCGGCTACCCAGGCAACCGCATGCTCCCCATCAATTGTAGTCCCATCGCTCAGTACCACCCCATTTTTCACACTAATAATGCCCTCATGGCCGGCAGCAGCATAATCAGACACTACAGCCTGCACCTTTTTGCCTTCCATATCCCGGAGCCGTTTCACAAAAGTGCTATACAGCGCCTTCAGCGAATTGTCCTTGGACAGCAGCCCGACCGTCTGAAACTCTTGAACCTCAAGGGCGCCCAGGAAATCACTATGCGCTGCGTTCGTTACTGTACCATTGGCTCCACCTGCAAGACGCATACCTGCCGTCAGAGTCAAGCCCTCAGTCCCGTTCTTCTGGAACGTAACATAATCGTTAGCTAAGAGATCATCCGCGTTGCCAACAGTTTGTTTATCCAGCTCTGTTCCGCCTAAGAGTGTTTTCACATCGAACAAAACATTATTTTCAATGTTTTTTTCAATGATTACAGAGATATCATTACCACGCTCGCCGCCATACTTGGCCGTAACCTGCAGACCATTATTCGTTATTGTTGCTTTCACACCTTCATTCAAACGGTAGAGCAGCAAGGTGCTGGCCCGCTTCAGCGCTTCCCGCACCGGCAGCAGAGTGGGATGTCCCAAATCGTAGCCAAGCAGCTTTTCAAAATCTTCCTGGGCTGTAATCTTTGTAATGACTCCCGGTGCTCCCCAAGAAAGAGAAAGCGCGAGCGCTGTAATGCCACGTGTCCCCATTTTGCCAATTGTACTTTGATTTGATGCTACATTCACGTACACCCCGGGGCGCACCTTATTTTGTGTTGTCCATGTTCCACCAGCCATTAGATAACCTCCTTAGTTAAAAAGCTCTTCAGTTGCTCTCTTGCTTCTTCCAGCGTGTAGCTCTGATCCTCCAGTAAAATAACATTCAGCACATCTTTTTCCCCGGGGGAAAAGTGCAGCGAGTTTACAATCTGCTTTGTGCTGAAGGCTGTATCACTAACTTCATTTGTATTCATTTCAGCCTTTCTCCTCCCGTCATATGCCTCATAGGCACCCTCTCAACTGCTGCGGTTTGCAGATAGATCATGAAATCAGCCGTAAACAGCGGCCCTTTCCCTTCTGCTCCTGCCTCCCAAGCCTGTCTGATTACGCGAAAAGCCTCGCCTTCACGCTCCATAGAAGCCAAAGCTTCACTTAATCCATCAGCCATATTCTCCGCATTCAAGCGGCTTCCTTGTTCATAACGGATACCAAAACGGTAGACCGCCAGATATCTGCCTTCCCGCTGCCTGTCCAGCGTTGCCGAGATTAACCCAGGCTCAAAATAAGCAGCCTGCGGTTTTTCCCCGCTGACATATACCGGTACATCCGGAAAGTAGCGGCCAAGGGCAGCATTGATATGATTCCGCAATTGTTGTACAGACATAGTAAGCATCCTTTCCTGGCCCTGCTGGCACGGCCACTGATGGCATTAACTTTTAAGTCCATTAATAACTAACCTTGTATTCCCCCTCTCAAGGGTAAATTAAAAACGGATATCCCCCTCTGCAGGAGTAATATCCGCCTTATAGTGTGGCAGGTGCCAGAAGAAGCTTTCACCGCAAAAATCAGTCATTCGCCTTTCAACATGGCTGAATCCTTGGAGCATTCATGCTCCTGCGGTGTTCTTCTGCTTCATTTGCCATGCTAACATCATACCCCCTTTATTTCCGCATGGAGCCGGTATTAGGACGAGATTAGAGAGAACATTGAGCGGATTCAGGGCGGTTTTTAGGCCGTTAAAACTTAAGTCCCTTTCGATGGTCTGCCACACCCTTAATATACGCTGGGCAGTCTCCTGTTCTTCTGCTCCTCTTGCTTCATAGATGATCCGTTTTTCATTAGTGAATCGAGCGATAACAGCCCCAGGTCCGTCAGTGCGAGCGCCATCTTGTAGAATGCCTTAGACCGTATTTTAACATAGGTATCCTTGCTGACCGGCGGATCGAACACATGGTTGTACACGGTGTAATCATATACCTCATCCCTGCGCATATAGCGTTCCCGCACGAGCTGCTGCTCCCGTTTGTCCAGCCTGTCCACTACAGAATCCATGGCAGCACAGTAGGCTCTTCTTGCGGCAGGAACGTCTACATTATGAGCGGCTATGGCAGCAGTCTGGTCAGTAATGGTATGGGTCGGACCGTGGAATCTCTCGGAGTAGGAATACGTTATCCCCGCTTCCTTTGCTTCAAAAGTAACCGTCTTAAAAATGCGGTACTTCTCCAACATGCTCTCTATAGTGGTTTGAGTACGACGGCGGTCCAGTTCAGGTAAAGAAGATAAATTCATCATCATATATGCACTCCTTTGCATTTGGGCTGGTTTCGGATGATTATTGCAGAAGTTTCCCTAGAGATGTGGTAAAATTCTTCTTGTTCGTATATTGTTCGCCTTTTTCAATAATATACCACTCTATTACCAATTCCGTAAAATCCCATATAAGGCCGTTTATAAAGAGAAAATCCCTATTATCACGATTTATCTTAGATACACGACTGGTATTACCTTTTGGCATTATTATTCACTTCATGTTTACCTATTGACAATAATAGCTTATATTATTATTAATAGAGCAATAGGTGATAAGGAGCGATCAACGATGGCAGAAGAATTCGGCAATTACCTGAGACAGCTTCGGGAACACAAAGGGCTGACAATCAATCAACTGGCCTCTCTGGCAGGCATCAGCGGTGCGCAGATCTCCCGGATCGAAAACGGACTGAGAGGGGTCCCAAAACCAGCTACCTTGCGCAAGATCGCAGAAGCTGCTGGTGTACCCTATGAAGAGCTTATGGAACAGGCAGGCTATTTAGCCGAGGATCTGCAGAGCGGTGCTGAGGATAAGGTTCCGGAATGGGCCACAAGTAAGGATAAACGGGATTTCCGCAAAATGCTGGAGGATGACGGGGAGCTTATGTTTGACGGGATTCCTTTGAACAAAGAAGACAAGCAGCGGATTAAAGATGTACTGACCGGCCTTTTCTGGGATGCCAAGCAGATGAATAAAAGAACTATACCCAAGCACGATTCAAGCAGCGGCAAGAATTGA

Protein sequences of DBSCAN-SWA_1

>NZ_CP048429|1079816:1096840|1081197_1081395_-|WP_020426193.1|DBSCAN-SWA
MLSRWIKRLSPLHREKERELTQASARVMFSILRYKDVSKEIQEEIQNNGFAEFLIYDRGVNNGRN
>NZ_CP048429|1079816:1096840|1096390_1096840_+|WP_062522749.1|DBSCAN-SWA
MAEEFGNYLRQLREHKGLTINQLASLAGISGAQISRIENGLRGVPKPATLRKIAEAAGVPYEELMEQAGYLAEDLQSGAEDKVPEWATSKDKRDFRKMLEDDGELMFDGIPLNKEDKQRIKDVLTGLFWDAKQMNKRTIPKHDSSSGKN
>NZ_CP048429|1079816:1096840|1085221_1086244_-|WP_062522772.1|DBSCAN-SWA
MAQTIQVKRGTRAELAAYGVLHAGEMGFCTDTKEVYIGDGTSNSMVGRAMSGPEASRPAAASAGRVYIVTSGTNSGYLYFDDGAAWRRINAQKLSDLTGSVDDVADGATYARVLKADITAGHVNKISDGTNIKTAAEIKTHIDDASKHRVINDAGTAITDLWSAQKIRNEIELAKHNIEPQSSVKDQNLAVPPASPAEGDRYIIPAAATGVWAGKTNQIAEYQSAAWVYYTPAVGWTAYVDDEQKIYSWNGSTWVRTGGALQTITAGNGLTGGGQADSVTLNIGAGYGIGVTADAIAVTAGKGITVDSNGVAANVDGSSIVYDTANGSRLMVGAIDGGTF
>NZ_CP048429|1079816:1096840|1095564_1096083_-|WP_143013545.1|DBSCAN-SWA
MMNLSSLPELDRRRTQTTIESMLEKYRIFKTVTFEAKEAGITYSYSERFHGPTHTITDQTAAIAAHNVDVPAARRAYCAAMDSVVDRLDKREQQLVRERYMRRDEVYDYTVYNHVFDPPVSKDTYVKIRSKAFYKMALALTDLGLLSLDSLMKNGSSMKQEEQKNRRLPSVY
>NZ_CP048429|1079816:1096840|1086661_1087720_-|WP_062522767.1|plate|DBSCAN-SWA
MYENQTFEALLERMLDRVPSSLDKREGSIIYDALAPAAAEMAQMYIELDVNSNLFFADTATGEYLERSIAWSGITRRAASKAELTAMFYNSANELLDIPLGSRFSLDLLHYTAVEKLAPGTYRIESETAGEEGNRYFGSLLPIDYIPGLARGEITALLIPGENAEDDEKLRQRFLESARRPSTSGNKYHYMEWALQIDGVGGARVFPLWNGPKTVKVVIVDAAKQPASELLVSQVQQYIDPVAGQGEGQAPVGAVVTVAAAAGKSISVSAKVTLASGYTLQAVIDAFKEILEKYRKEKAFTASYISQSVIGSLLLDTEGVVDYSGLKLNGGSGNVTLSETEVPLFSSVVLEV
>NZ_CP048429|1079816:1096840|1094761_1095175_-|WP_062522752.1|DBSCAN-SWA
MSVQQLRNHINAALGRYFPDVPVYVSGEKPQAAYFEPGLISATLDRQREGRYLAVYRFGIRYEQGSRLNAENMADGLSEALASMEREGEAFRVIRQAWEAGAEGKGPLFTADFMIYLQTAAVERVPMRHMTGGERLK
>NZ_CP048429|1079816:1096840|1089417_1090119_-|WP_062522759.1|DBSCAN-SWA
MEEYGFFLSFNELEDLFRLPVNPETLEIKESGDSKSYTIVDLGEINAIAYPKLTEITIESIFPAQHYPFVLVRSEGPNRLLRPFEYVEMIQKWMKSRRPIRFVLSGVSLKGEQDNSAVPNDLALNMAMSIESFTWKLSAGTSGDIEYSLSLKKYVFYQASPVKIVKGEAKTEPKRASDKAAPKTYTMKAGDSLWSIAKKILGDGQKYKVIQKLNGIKDSELKKLPIGKVLKLP
>NZ_CP048429|1079816:1096840|1093266_1094589_-|WP_062522754.1|tail|DBSCAN-SWA
MAGGTWTTQNKVRPGVYVNVASNQSTIGKMGTRGITALALSLSWGAPGVITKITAQEDFEKLLGYDLGHPTLLPVREALKRASTLLLYRLNEGVKATITNNGLQVTAKYGGERGNDISVIIEKNIENNVLFDVKTLLGGTELDKQTVGNADDLLANDYVTFQKNGTEGLTLTAGMRLAGGANGTVTNAAHSDFLGALEVQEFQTVGLLSKDNSLKALYSTFVKRLRDMEGKKVQAVVSDYAAAGHEGIISVKNGVVLSDGTTIDGEHAVAWVAGATAAAAVNESLTHQSYDDAVDADVRLSHSETTEALLSGEFLFTYSGGRAVVEQDINTFTAYAPDKGRAFSKNRVLRVLDGIANDLKSIFETYYIGKVANNEDGRALFWSQCATYMNELQNIGAIEDFKAQSDVVVAAGTDSDSIVLDVAVKPVDSVEKVYMKVKVV
>NZ_CP048429|1079816:1096840|1090120_1092070_-|WP_062522757.1|DBSCAN-SWA
MRIDVSKAVMLPVKSLAIWKVINKQSLRIGVKLDLANRSIKGMQAVLTRSSDELNRSLDKVNQSLLDINDTLLEGFKRLPPQILVSRDIVVGQSQQAGQSQQLGVRMLNASPTVQAAKKEEEKAKKVEWWKGFEKKAKKDEKEEEKKPEVKVEPVPTPKINLKKEPPVPPAPPTPPQPDSKILNFLKTADWVTPFNKIKSFGEKAVKAAVKPGDIADWNKLNKNVDTAMGKIGEKALGALRPVMDTLSQALTSGQLAPTIDALANGFLVIANVIGMIVDGLLWLVGVVQENWDIIEPILIAIAVVYLAAMIVQVYLLAAAWLAANWPILIVIAVIAALILIFQNLGISAGQVVGAIAGAFSWLMAVFQNIWIGLQNGFYVVWDGIVNGFNTAILFVKQLLYGLGMGTLDVLYNMAVGVESFADGFVKVMVEAIRWVVDKFNGMAEALSKIPFFDKMGIGTIKLDLDGLKVPHAASELVDKYRKEFKTLEPPEDITKQETKHKEYVDTKDAFNSSYTQAKEWTDNKVESISSAFSDKGRDAKKLTKPPASGQQIQNTAGLFANQGGNLNNVNRVNEVGTINDTVDISSEDLEMMRELAEIQAIQNFVELTPTVQVTTGNINNAGDIDTIINKIGQKLNEEFVSTAQGVYT
>NZ_CP048429|1079816:1096840|1094588_1094765_-|WP_167330777.1|DBSCAN-SWA
MNTNEVSDTAFSTKQIVNSLHFSPGEKDVLNVILLEDQSYTLEEAREQLKSFLTKEVI
>NZ_CP048429|1079816:1096840|1092090_1092270_-|WP_062522756.1|DBSCAN-SWA
MNGGDSEANLAYYALHELHILPHELMKLSSRERAAIYAMIAVRVEREKREQSRSKGKRR
>NZ_CP048429|1079816:1096840|1088442_1089405_-|WP_062522761.1|DBSCAN-SWA
MELLLKNKEGLLWDIAGIVSDLSWKTSRAGKPATLDMTIIDSGIYQHPKFKISNGDIVQFRKDGINVFYGFVFSIDTGSDQQIKLTAYDQIRYLLGNGSYVLQDVTASELITKIAKDYGLKTGVLEETTYRMPSLIENDKKLLDIIMGAIGGEMEKKGRLMAFYDDFGQLTLRGMDSMKLDLVLGAGHYLYDYSLKKSIDDDTYNTIYLYKDNKESGKREFYPVSDPENVKRWGILHLYKKADDKANAAQIRENADNLLKLHNREKTSLSVQAIGDLRVRAGNLIYVLLDELNTKLFLVEQCSHKISGGEHTMSLDIKVV
>NZ_CP048429|1079816:1096840|1079816_1080080_-|WP_062522939.1|holin|DBSCAN-SWA
MDNVLAFASVLAVFTLALVQLVKNNINLPRNAVPFIGLGIGLLIGAAAYPFTDLGLTLRLWSGGLAGLSATGLFELAFNDHPGTTKK
>NZ_CP048429|1079816:1096840|1084259_1084871_-|WP_062522773.1|DBSCAN-SWA
MAYSENIYGTISYSSSPTTQEGPEFNKPDLMKYLPEYYQGVLEMEQIQDSHAAECGQLAYSIEDSALQTNVESATWGLARWEKVLALTTDSTKSYAIRREMIKAKLRGSGTTTPEMIRRTASAFSGGDVQVVEVPGAYSFEARFVGTLGIPANMAGLIQIIEEIKPAHLDYKFVYSYTWWNSLKSLTWNAAHARTWNELRVYE
>NZ_CP048429|1079816:1096840|1086245_1086659_-|WP_062522769.1|DBSCAN-SWA
MGYPQQVDEFTDKLNKKANGGSYVVEEKLLLTDGVYSGLLAHDNINNQSISVYTGSHYSGVELRNFSVSFPDETPWRRIIKIFAGVPEVYVTYETPGDTVEADDINALQSGLTAAQKELERYKATGRIDGGSFRREV
>NZ_CP048429|1079816:1096840|1080818_1081211_-|WP_074648610.1|DBSCAN-SWA
MGVIDFLRLIAYSVSLICALLLIAALFLYFRRRLRAKAVSLFMLAAFFFLGAYTFQMAVALWIRCTAVSGADTVLASLKTEAWAVAQTGTTIGLLILTLLVFTKRQDLFIVLQEGKKGGASHADPDTNQK
>NZ_CP048429|1079816:1096840|1082670_1084248_-|WP_062522775.1|DBSCAN-SWA
MQTTGNLGLKKPDGTDIVDIADLNGNMDVLDTAVKNVQDHTVDTVKHITAAERTAWNAKASTAAATTTAAGLMAAADKAKLDGVAAGANKYVHPNHTGDVTSTGDGVTAIAPGVIVNADINAAAAIDASKIGTGTVSNVEFGYLDGVTSGIQGQLNSKAPLATTPQQTTADITYYVRTDGNDGNNGLANTAGGAFRTIGKAVSMIPQNVNHAVVVNIAAGTYAEDVVLKGFGGGGTLGINASGTVNVTRLSMQENTIQVTITGITATTTTTNAIELISNVWTWLQNCNVTASAGSYYGVMVYGGGAVISGGMYSNKTTSIWARSGANVFVVGVSGSGSGYGYLATEGAKIGGSVGTMSATAAISSTQTGGIIAFGDGVVNPWGDNTSTSRSYVQAAHNASQTISSSVRTKINYGQEDKDQREEYDGIGRFTVKQSGLYHVDASLLLNANGNFETRLYYYVNGQAGRTLCFDQVGSPGAFIFLGGSKTVPLNAGDYLEIYIEQKKGVDIITLADPTICSLNIDRIG
>NZ_CP048429|1079816:1096840|1092269_1092692_-|WP_039833329.1|portal|DBSCAN-SWA
MSELSMFFAQNVACDTTEEFVVSQRFKDKEGQPVAWKLRSMTEDENQECRKAATRKVKGKSGVYTSEIDPNDYMAKLMTSSVVHPDLKNAELQRSYNVLGAEALLRKMLLPGEFAALGERVQALNGFGTDMNELVEEVKN
>NZ_CP048429|1079816:1096840|1080148_1080847_-|WP_062522781.1|DBSCAN-SWA
MLTLTQIKNKSAPRLTGLHPVVLAAATALIECCYTCGVPVQITQGLRTIAEQDALYAQGRTKPGAVVTNARGGQSYHNYGLAIDFALLLPNGSSVSWDMARDGDNDRTADWLEVVQQAKRLGFEWGGDWTSLKDYPHFQMSFGLTLSKLRAGAQPSVQAVEAAYKLINGRTKGEQNLNSDAVTIVKVNGAKIADGRLENGVTYVPVRAVAEALGASVGYDSVTRTVEITSGR
>NZ_CP048429|1079816:1096840|1092800_1093265_-|WP_020426177.1|tail|DBSCAN-SWA
MAFLKASDTLSGQEGRAYAVIGTQTEEMFYVKTLEATVEKTKAEVKTLGRRGVQHKATGWSGSGTMTIFYMTSRFRQMMLDYMHTGVDQYFDIEVTNDDPSSSVGAQRIILKGVNLDSVIMASLDTESDALEEEVSFTFEDVQIAQAFGSPALQ
>NZ_CP048429|1079816:1096840|1081396_1081705_-|WP_062522779.1|DBSCAN-SWA
MNSNDVANLEKILPLADKYGLAYIVALILLVIVLVLLRSIVKGNLVPRELLERAEEDRDRLQNILDKERSDFMAPTLEVLQRLKIDQASSGVNVVNEEDRGG
>NZ_CP048429|1079816:1096840|1087712_1088144_-|WP_062522765.1|DBSCAN-SWA
MIPVIGNAGPIIATPDGDTSFENTEMSSLTYRMDWDKKRITGRLDGLEAVQQAVAKILRTDRYEHLIYSSDYGTEWGLVLGKDRLLVRAEIRRIVSEALLQDERIIRLEDTAVSFNGDNLSFSCKVVTQYGNFELRKEMSEGV
>NZ_CP048429|1079816:1096840|1088140_1088437_-|WP_062522763.1|DBSCAN-SWA
MLDIIKKASLGAVGSTNPVAFSYGTVTVAAPLQIQVDQRFVLSGAALVLPESVMESKLEWDGREIVLRRGLEKGDRVLMVRMQGGQSYVVLDRLVDPV
>NZ_CP048429|1079816:1096840|1084873_1085209_-|WP_074648612.1|DBSCAN-SWA
MALKTLIQIRRGQESALGTLAAGELGFCTDTGKLYIGTGTVNKLLVASQSTGDMLKSIYDTNNNGKVDYAQAADTVPWSGVDGKPAVYPPAAHTHEYMPKGPLSWNQLKGV
>NZ_CP048429|1079816:1096840|1082183_1082657_-|WP_062522777.1|DBSCAN-SWA
MNIAQAIMHLYPQAAQTQDFIVQDNGPEPVLRPGAEEKGRVRYEIKPPEKGEEPVEGVHYRYGIDYNLLTEGEDYDIVERGPYIAVWNLDKPKPTEAELQAAWKAYQEAEANKPPELTEVEQLQKENVLLKAQNNALSERADFIEDIIAEMATRVYQ

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062522939.1|1079816_1080080_-|holin	holin	A0A1W6JQK4	Staphylococcus_phage	3.6e-08	42.2
WP_062522781.1|1080148_1080847_-	hypothetical protein	A0A127AWA8	Bacillus_phage	2.7e-42	55.3
WP_074648610.1|1080818_1081211_-	hypothetical protein	NA	NA	NA	NA
WP_020426193.1|1081197_1081395_-	hypothetical protein	NA	NA	NA	NA
WP_062522779.1|1081396_1081705_-	hypothetical protein	NA	NA	NA	NA
WP_062522777.1|1082183_1082657_-	hypothetical protein	NA	NA	NA	NA
WP_062522775.1|1082670_1084248_-	hypothetical protein	S6B1J7	Thermus_phage	5.9e-05	27.9
WP_062522773.1|1084259_1084871_-	YmfQ family protein	S6BFJ0	Thermus_phage	1.5e-44	50.9
WP_074648612.1|1084873_1085209_-	hypothetical protein	A0A0A7S181	Clostridium_phage	5.6e-06	65.7
WP_062522772.1|1085221_1086244_-	DUF2793 domain-containing protein	A0A1L2C906	Pseudomonas_phage	1.3e-16	52.8
WP_062522769.1|1086245_1086659_-	hypothetical protein	A0A0A7S1G0	Clostridium_phage	4.3e-32	53.7
WP_062522767.1|1086661_1087720_-|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.3e-96	53.7
WP_062522765.1|1087712_1088144_-	DUF2634 domain-containing protein	S6B9X2	Thermus_phage	2.7e-21	43.5
WP_062522763.1|1088140_1088437_-	DUF2577 domain-containing protein	A0A0A7RTJ2	Clostridium_phage	4.5e-15	40.4
WP_062522761.1|1088442_1089405_-	hypothetical protein	S5MNC9	Brevibacillus_phage	2.7e-85	46.9
WP_062522759.1|1089417_1090119_-	LysM peptidoglycan-binding domain-containing protein	S5MUH0	Brevibacillus_phage	3.0e-49	45.7
WP_062522757.1|1090120_1092070_-	hypothetical protein	S5MNW9	Brevibacillus_phage	6.1e-20	28.6
WP_062522756.1|1092090_1092270_-	hypothetical protein	NA	NA	NA	NA
WP_039833329.1|1092269_1092692_-|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	2.5e-11	38.1
WP_020426177.1|1092800_1093265_-|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	3.7e-48	59.5
WP_062522754.1|1093266_1094589_-|tail	phage tail sheath protein	A0A0K2CNL4	Brevibacillus_phage	6.3e-109	48.4
WP_167330777.1|1094588_1094765_-	hypothetical protein	NA	NA	NA	NA
WP_062522752.1|1094761_1095175_-	hypothetical protein	NA	NA	NA	NA
WP_143013545.1|1095564_1096083_-	transcriptional regulator	A0A0C5AFG5	Paenibacillus_phage	3.2e-40	61.2
WP_062522749.1|1096390_1096840_+	transcriptional regulator	S6C481	Thermus_phage	3.6e-24	48.0

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP048429|1317730:1331413|DBSCAN-SWA
ATCATTGATTTTTTTTATTCACGCTCATTTTCATCTTTGCAAGATGCTGAACTAACTCCCTTACAGCTGATTCAACAACAGGATCGTCCCGTAAACTAACCTTGAATTCTTCTTCGGCCTCTTTAATGATACGAACCATAATTTCTTCAGGGAGCGTGTATTCGCTCTCTTTTTTATCCCCTAAAAGCCAATTTGAATCAACTTCATAAAACCTAGCTAACTTATTTAAAGTATTGAAATCAGGTTCGGATGTTCCTCGTTCATATCCTGAATATGTTGTTCTAGGAATAGATAGTTGCAAAGCTGCCTCTTTTTGTGTTAGTCCTTTTTTCTTTCTTAGCTCTTTCAATCTAATTGAGAACAAGTGAATTCCTCCTTCATTTATCATTATAATGACGAAATACTCGACATTAAACAAAATCAGAACTTTTGACTAGATAATAGTATTTATGTGTTGACATGACGACAAACTCGTCATATACTTATAACATCGACAACGACGAGATACTCGTCAGAAAGGAGAATCGATATGCGTCACTGGTTAAAACAAATTAGATTGTCAAAGGGTTTAACACAATTTCAAGTTGCTGAGATGAGTGGAATATCTCGTAGTTACTATGCTGACATTGAACGTGGTACTGCAAATGCTGGTGGGTCCACAGCAAAAAGTATTGCGGATGTACTAGGATTCGAAATGTCTCTTTTTTTTGCCCAACAAGGACGAGTAAGTCGTCAAAAAAGTAAAAAATCAGCCTAAGGAGTGATTATGTATGAACCAGCTACAAAATTTCATTTACGGACAACAGCAAGTTCGCAGCACTGTAATTGATGGAGAACCGTGGTTCATTGCAAAAGATGTTTGTGATGTTCTGGAAGTAGGCAATCCGAGTCAAGCAATATCAAGACTAGATGAAGATGAAAAGAATACCATCATTTTAAATGAGGGTAATCGTGGAAACCCCACAGTAGTGATTGTCAACGAACCTGGCCTATACTCCCTAATTCTCGGCAGCCGCAAACCAGAAGCCAAACAATTCAAACGTTGGATCACGCACGAAGTAATACCAAGCATCCGTAAACACGGAGCTTACATGACACCACAAACCATTGAACAAGCAATCACATCACCAGACTTTCTTATCCAATTAGCAAACAAGATTAAAGACGAGCAAGAGAAAAATAAGTTTCTCGAACAAAAGATAGAATCCGACAAACCAAAAGTTCACTTTGCCGAATCTGTAGAAATCTCTAAAGATTCCATCCTGGTTGCTGATCTCGCAAAGCTACTGAGACAAAAAGGCGTAGAGATCGGTGAGCATCGGCTGTACAGATGGCTACGCGAAGAAGGATACCTTATCAAGTCCGGTACAGAGTATAACCGACCTACACAACGATCAATGGAAATGGGACTGTTTGAAATCAAGACTGGTCACCGAGGAAGTTCAGACGGAACAATCAAGCTGACTTACACCACTAAGGTAACTGGAAAAGGCCAAATTTACTTCATTAATAAGTTTTTGACCGCTGCTTGATAACCGCTCTCACTAATCTAACAAAAATAGTTTCACTATGAAAGGAATTTATTCCCAAGGAGGTTACAGCATGAAAGTACAACCACAAGGCGTAAACCCTGGATTATCACCACAAGCATGGTACAAATTGCACGTAAGACTGGCGCGGATGAACAAGAAGTACAGAGAGCAGCTGATGGAGGCACATATGAAGGGGGAGAAGAAAGTTGGCTAAAAGACGCGAGGATATAAACAAGTTCACATTGATTGAGACGCACAAGCGGTATCACAAGCCAGCGGACAAGCCCAAGCCAAGCCCATACCGTTCCTACACACCAATGTGCGGATGCGGTGAACGAGAAGCCGAATGGGAAGTCTACGAAACGCTACAACCCCATTGCACAGCCTGCAAGGATGAAGCCATGACAAGTACCATCAAGCCGTTTGTACGGCAGCTGGGAGGGTTTGACGATGCAAGTTAAGTACCCACCGCCGCCACCTAGTATAGAGTGGTACATCGAGACAGAATGCGGACATCTACTATCATGGTCTGCGGTTGATCTAGACAGCCTCTTTATTCGTCTTCATGAGAAGGGATTTCGCGCTAAGGAAGTAATGACATGGGAAGAGCATGAAGCAAAAACGAGTGAAAGAGAGCTGAAAGAATCTGCTTAGAACGGTAGCCGACATTATATCACATTATAAAGGAGAGAGTGAAATGGAAGTTAAATATTTGTTCACAATGGGCGGTAAATCAGCAGCAGCTAATAATTACAATAATCATCCGAAAATGGAGATATTCACATTGAGTATCGACAAGGGTGATATCAAAATGGAAACTCACATGAACCTCGAAGATATGGAGAATCTTGCTCAGGAAATGATGGAATATGTTCAGGAAGTAAAGGAACATGCGGCGGTGTTGATAGAGATGGGAAAGGTATGATACCGCAAGACCGGACGTTTTACCTGGAAATGGCGAAGTTGAAACCGAAGGACAGGCGTTGGGTGATGACGTGCTTTAAGAACTACGCAAGGGTGTGGAGACGAGAACAGGCCGCCATGCAGGGCAGCCCGTTGAAAGTCGCATATTAAAATATTCAATCACAGTATACCAAAACTTTAGGAGGAATGGAACATGCCTGAAAGTTGGGAACAGTTACGCGACGAAAACCAACAACTCAAATCCGAGAACGAGGATTTAGCGCGACAGTTGGCGCAGGCCAATGACTATATAGCACATTACGAGGATTCACGCAGATGAAGACCCGTGATGAACGCACAAAGTACATCATTCGCCACAAGGATGGATATTTCATTGATGTTGCAGGTAACCAAACATTTGATTTTATGAAAGTCACTAAGTGGAGCGATGAAGAGTCTCTATATGATTTTTTGAATCACAACAGCTATGCCCCGCCGAATCCACTTGATTACACTGCTCAGCGGGTGCACATCACATACGAATTGATAGGGGTTGATACGAATGTGCAACAAGAGTGAATCCATTGTAAATCTAGCAAAAGCGCTGGTTGCGTTTAACCTTGAAGTGAAAATCATCGAAAAAGACGCGAGTAACCCGCACTTCAAGAACGCATACGCCACATTGGACACCATTGTAAATGAGGTACGGCCTATCCTTGCAAAACATGGGCTTGTGGTAATGCAGTTCCCAGGTGGAGATGGGGAGAAATATACCCTTCGAACCATGCTTGTACATGAATCCGGGGAGTGGATAGAGTCTGAACCACTCACTATGAAGCCTGTGAAAAATGATCCACAGGGCATTGGCAGCTGCACCACGTATGCGCGGAGGTATAGTCTCTCTGCCATGCTTTCACTGAATACCGGGGAGGATGATGACGGCGAGCAATCTTCTAATGCGCCTGCACAGCCACCAGCAGCCCCACCAAGGGCTTCCAATCCACCAGCCAATACAAATACCCAATCAACATCATCTGGTCCAGCAGCACTTATCAGCGATGCTCAGATTAGATACTGCCATAAGATCAAAAGTGAAAAAGGAATACCTGAGGATGATTTCAGAGCCATGATATCGGCAATTCCTGGTAGGGAAAGCATAAAGGAGTTAACCAGTTCAGAGGCCCGTGTGTTCATCAATAAACTAAATTCGATGTGAGGTGTGACCATGCGAAAGAAGCCAAAGAAGAAGGTAGCCCCATGGCGTGAGGGCATACTTGATCACCACAAGCGACACAACCGCCTGAGAGGCGCGATCACCAAAGTTACTGGCGAGGTTAGGGCAGAGGTGAACAGGCGCTCTATGGAGCTTATGGGAACGGACGTAGCGGTCTGTGAGCGCTGCGGTACATCGAAGAATCTCAGCAAGGGGCATATTGTCGAAGCAGCACATATGGGTCCGGGTTACGATCCGGCCAACATCATGAACCTATGCGGTACTCACGGCTTCAAAGGCACATGTCATGATTGGTGCGATAACGAATTCGCCGGACGCACATGGAAGAAACAATACGGCGCAATGTTACGGCTCTACTATAGCGAAGGAAATGGTAAAAACTACTGGTCCTATAAGGAGGAAGCATGATGAAACTTTGGGAACAATTCTTGGACTTGAAATCTCAAATTCACAACATCTACGCAGACGAAGACAAACGTCTCGCTGATGCACGTTTCCTTAGGTCCGTTGAATCTATCGAACGTACGCTGAAACGCTCTCTAAGAGGATCTGAGTACCGTGTGCTATTCACATTTGATGACCATCAGGCTGAACTTATAAAAAATCTACTGAAAGAGGCGCGAAATGGAGAGGAAAGAAGCACTTAAAGAAATGGACGCTTACCTAAAAGTATGCAAAACCTGTACCACACGCAATGACAAGAAATGGGCCAATCCATCCTATAACCGGCTGCAAAAGCACTGTAACACCGAATGTAACACAGGTGAAAAGCTACTCCGCATCGCTGATGTGTTGAAAGACGAGGTCCGGGCGCGGCGGAAGCAGAAAGGGGTGAGCGCATGACCAGTGGCCCCCGCGTTACCGCAAAAACATTTTGGGTATGGACAGAGACAGCCGCCGCAGCGAATCCCTGCCGGATTCCGGGTGCGCCTGTAGAACAGCAATTCTTCCACTACGGCAAAAACGCCCCGGCAGGCTGGCTGGAGCGTGAGTACATCGTTGATGCAGAGGACTACGAGGGACAAGTTGATTTATTCGGGGTGGTGAACTTATGACCAGACAAGAGCAACTCAAAAGCGAATTAGAAGACTGGAAGAGTTGGCTCCCTATCTACGAAGGACGCTTGAACGAATCCCGCACAGTGGCAAATAGGGAGCAATACCTTCACATGGTCGAGTTCTCGAAAGAGAGGATTCAGGCCCTGGAGGCTGAGCTGCAGCAGTTAAAGAGCGCTTAGTCTTCCTTGCTATCCTTCATATGGTTGCGAAGGATGACATTTATCATCGAGCTAACGGATCGGTCATCCTTCTCAGCCAATTCACTAATATATGCTGCTACGTCAAGATCAAGCGTTACGGAAACTTTAACCTTACTATCTGGATTCGGAACATATTCAACATCAGGAAGAATATTGACCCATATGTTTTCTGGAACGTTAGTTAAATCTACAGAGTTATCAATTTTAGGAGCAACGGCAATACCAATCAACTTTTTATCTGATTTATAGGTGTCCAAATAACGCTGTAATTGCACAATGGTATCTGATGTTACAAAATCTCTTTTGATTTCAATAATGTAAATTGTTTCATCGTCTTCACCTAATATATCAATTCTTCCGCCGCGAACTGAGTATTCTGTAGTAATCAATCCGAAGTCGAAATATGTGTTGAAATTATCAATTATAAATTGTTTCAACTGGTTTTCCATTGTGAATTTGAACATTTTCATTCACCCCTATTTTTCGAAAAATGCAGCATGCTTTTTTAGCAAGTCTTCAATAGCTTCATCCATAAGTTTTGATTGAGGAATACGGCTCAACTCTGAAAGTTTAATCAGTTTTTCTTTTAAATCTTTTTCAATTTTTGTTGCGTATGGAACACGTTGTGACATGTCATTACACCTCCATACTTAGTATAACCATAAATACAGTTAATAATAAAGAATGATAAGTATTGACACGTCATGACTAGTCATGATAATATGACGTCAAAGGAACATGAGGGAGTGAGAATATGAACGACACAAAGAAGTTAAAAAACATCCCCTACCGTCTTGATCCTAACGAGCATAAGCGGCTGAAAATGTTCTGCGTAGAGCGCGGCATTCCAATGCAGCAATTGCTAGATAAGGCGGTGCAAGAGTACCTGAAAAAGTGGGCGGTGTAGCCAATGGCAGGTGCATTCCAAACGAGCCGGGAGGTTTTCGAAAATCCGATATGGAAAAACATCGTAGATTTCCGGTTATTCTTCCTGATATATGGTAATGCGATATATGCAGAAGAAGGGTACAAGCAATCCGAAGACTTGTTTTTGCAACGTGGGGAGTGGTGTAGATCCATACGAAAATTGCAAAGCGACTTGGAATACATCGAGAACCGACAAATCAAAACTTACTCAGTTTCTGTGATAAGCCGTTGCATTAAGAGGTTAGAACAGTCGCAGAGGATACGCACGAGAATACATGAACTTGGAACAGTATTCACGGTAGTAAATTACGAGCAATACCAAGGTTTTGAAAGTTACCGAAAACATAACTTGGAACATAACTTGGAACAGTCGGGGAACAGTGGAGGAACAGCAGCGGAACAGTCGGGGAACAATAATAAGAAGGTAAACAAAGATAACAAGGTTAAAAAGGAATCTATTAAAACATATACCCCCGAATTCGATGAATTCTGGAATGTGTATCCACGGAAACTTGGAAAAGTAGAAGCCTTCAAAACTTGGACAAAGGTAATCAAAAATGGCGAAACCCCAGAACTCATTATTAAATGTGCTACAAATTACGCTACTGACTGCGAGAACAAGCAAACGGAGCAGCAATACATCAAGCATCCGAAGACATTTTTAAACGATGAACGATACAAGGATTACACATTAATCGCAGTGGGAGGCGGAAACAGTGGAAAGTATGGGGCAGGTTATGCAGGACCTTCTGAAGCGAGTCGAAAGGCTGCGAGCAGAGGCGCTGAAAACTTCATCGGAAGCCCCGGACGAGAATCAGGACTTACCACCGAAGAAGTACAACGACGCGCCAGCAATTTCGACTGAGGGCTGCGAGAAGTGCGACTACACTGGAACGATTAACACATTCAGGTGGGAGCAGCCGGAAGGATATCAGATCCCAGTGCAGATAGCAGTCGTTGAAAACTGTAGTTGCCACACAGAGCGAATGTTCCAGAAATACAACGCCTCAGAGAGCTTCAACGCAAAAGAGCGCGGCTATACCTTCAAAACGGCAACGATTGACAACATGAACCGCGAGCAGTTTGGAGTGGCTATCGACTTTGTACGAGACATTAAGCGACATCTGGAACTTGGTACATGGCTGTACATCTTTGGCGATGATGCCCGGGTTCCGGGAGCTTCCAAGGAGCAAGGTGCCATTCTAAACGCCTACGGGACCGGGAAAACGTACCTGATGCAGTGCATGGCTAACGCATTTTCATACCGAAAGATACCAGCGATCTATGTCACTGAGGAACGCTTATTCTCAGACATCAAGGCTACATACAACCGGGCGAGCGAAGATTCCGAGGATGAAGTACTACAACGGTATTACAGTGTACCAATACTGATGATTGACGATATTTTCACGGCACAATACAAGGAGTGGGCCGAAGGTAAACTATTCAGCATCATCGACGAGCGCCAGAAGAACAACAAGGTGACCATTATGACCAGCAATTATTCGCTAGGCCGGATACGCGAGCGGTTACCCATGAATGGTGGGAAAATCGGAAGCCGGATAGACGGAAAGGCAATTCAAATTGAAATGTTGGGGCCAGACCGGCGAGCACTTAACAAGAATGAGTCGGCTTAAATCAATCAGTTGAGAGGATGGATGAACAGTGAGTTACTACGATGAGGATTATTACAATGAGCCAAGTGAGTTTGAACAGCAGGTAGACGCATTTAAAGAATCATTGCTGAATGCAGTCAAAGAAGAGCATAAAGCGGAGATTGAACGGTTGCGGAAAGAAAATGCAGAGTTGCAGGAAGTTAAGCAGAACCTTGAATCAATTAAGCGTGAATACAACCAAAAGGTTGCAGAACTGGGAATTCAGAAAAACAATCTGAAAAATGAAGTGCGGCGCGAACGTCTTTTAGAACTAATGGGTGATTTCAAGGCTGAATTATTTTCTCCACGAACGAAATGGATGAGCGGTCCAAAATGTAATAAGTGTGACGATAAGAGACGAATTCCATTCCTATCACCTTCAGGAAAGGAAATGGTAGAAGATTGTTCATGCAAAAATAATATTTTAATCTATGAGCCCCGAACAAATATTTGTTCTTCGTTTGAAGTTAGAAATGGAAAATTTATGGCTTGGTATAAATCGTACTCTGTTGATAGAGCGGACGGAATGGAATTAGAGTCTTTAGGGGTTTCAGACGTTGCAAAGTTCATTTGGGCAGGCGAAAAATTTGAGGACATTAAAGATTATTACAAGGCTTATTTCAAAACCGAAGAAGACTGCCAATCATATTGCGACTGGTTGACTGATCAGGAAAGTAACAAGGTAAAATCATGACCAAACCAATAGACGACTACGACCTATACGACAAAGACTTCGCCTTATGGTGGCGTAAGGGCCTGGAATCCTTCGGAATGGACACTAGTATCGTGGATGAATGGGAACGTGAGCAGGCTGAGGCGGCATAACAAGGGAGGAAACAGGGATGAACATAGACGTCAACAAAGTCGGAAAACGGTGGTTCATTTGCAAAGGTGATGGAATAGATGTTGAAGCTACGTATTCGCACTGGGTGGATTGGAAGAACGGATGGAAGACCAAACGGAAATGGACCATAACCGGGAAGGGCTCTAAAAAGTACCGGACAGAGATAATCGAACAAGCAGAGAAGCAAATGAATCCGTTTCACAGCTAATACAAGCCCCACACAGACGTTATAACCTCAAGGAAAGGTATTTATGAGGGTTACAAATTTTAAGCGCTCTACGGGGCTTACAGGAGGCTAAGAGATGAAGTGTTCCAGATGCCAGCAGGAAAAAGAATCAACATGGATACGCAGAACCAACACGGCGTACGTTGAGGAACCGCTTAACTGGGTGCTTGAATGTGATGAATGTTTTGAACAAACAGAAGATTTTTGGGAAATGATGTGGCGCGATCATGGTAACGGATATTAGGTGAGAGGGTGAAGGTAATGGAAAAGAAGAGTATTAACTTCTGGGAAACAAGTAATATGGCGGTGCAAATTAGAAGAATGTGCTGCCCGGAGTGTGAAGGTGAATTCTATGAGATTGATGATCACGTGTTAGAAGATTGTCCGATATGCCATGTAGCGCTTTTTGATGAACCGGAGACGATGGAATGGGATTCAACAACCTACACACTCATTGTTGATCATAAGACAGGTGTTCCGAGCGTAATCCGCAATGATGAATACGAACCGGTTTTGCGCGATAGCGCCATCGTTCCGACAGAATCCGCTCAGGCTTCAGCCGGGGGCCGTATAGGTGGTTCCCATGAATAAACTAACAGAGATGAAAGCGGCGTATGAAATTTTAGAAGACGGAGTAGCATTGATTCCAGACTATACAATACTTGCAGCAATAGCGTTGAAAGACTTTAAATACCTAATTTCTCTCCTAGAAGAAAAGGACAAAGCCCTATCGTTCTACGCAGACGAAGATATGTACTTTAGGAAGCCACAACATCAATTAACATTCATCGAAGCAGACTTTGGAAAAATGGCCCGTAAAGCCCTTAATACATCCACTAACAACGAAGGAGAGACGTTATGACGCCGAACGAACACATTGAAGAAATGGGAATGACAATATCTATGATGGGAGCCGAACTTTTAGCAACAAAGAAAGAGTTAAAAGGGGCGCTGGCTGCTCTAGAAGAGGCAGAGCAAAAGATCAAGGAATGGCAAGATGAAGCGAAACAATGGCGGGATGACTTTGTAGAAAAGAACGATGAGTTGGCAGAGGCACAACAACAATTTATCGGCACAACTTACAAGTTGGAAGATGCGCAGCAAAAGTTAGAGCGACTTAAGAGGCTGAACAAAAAGTTAGGGTTGGCTATGGACGTGAAGAACGCCAGATTAGTAGAGGCACAACAGACCATAGCCCGGCAACGGGAGGCGCTGGAGAAAATAAAATCAGATGGCGCTTGCGCAGGGAACAACTCTTATTATCACATTGCTAAATCTGCACTTGAAGTTGGGGAGACACAGCCATGACACAGGTACAGACAATGACCAACCCGGAGCTTAACCAGGCGCTGGCGGTGTTGATGGGATGGAAGGCCGGCGGAGATCCAAACAAGAAACGTGACTTTGTTTGGTGGATTGATGAAAATCGCTTCCGTCTGCCGGAGAATTGGGACCCATGCACTGACCCTGCTGCCTCTCTAGAGGTACAGGCAAAGGCTATAGAGGTAAATTACGAACTATATGTTGATCAACTATCAATCGTGGTATATGGCGAAGAAAACTATAACCGCGCCAGCAATTGGAATGAATGGGATATAAGTAGACTGCTGATCGCAAGCCCCAGAGAGAGGGCAGAGGCGGCATATATCACGCTATCGCAGGTGACGACATGAATCACTTAAGCCTGTTCAGCGGAATCGGCGGGATTGATTTAGCAGCTGAGTGGGCCGGCATGAAGACAGTGGCATTTTGCGAACGTGAGCCATACCCAGTTAAGGTGCTACAGAAAAACTTCCCTGGCGTCCCTATATACGATGATGTGAAGACACTAACGAGAGCGAGGTTGATAAAAGATGGAATCGTTGGAAATGGGCGAACAATTGACGTTGTTTCCGCCGGATACCCTTGCCAGCCTTTTAGTGTTGCCGGGCAGCGAGAAGGCGAAAATGATGACCGCCACCTCTGGCCAGAGGTTAAGCGCCTACTGGAAGAGATCAGACCCCGTTGGTTTGTTGGCGAAAATGTTGCTGGACACATCACTATGGGACTCGACTCTGTGCTTGATGACCTGGACAACATCGCGTACTCCGCGCAACCGTTCATTATTCCGGCTGCGGCTTCTGACGCACAATATGAAAGAGAACGGGTTTTCATTCTTGCCTACGCCGATAGCCAGCGATTACCGGGGGGGGAGATCACGAGAAGCAGCAGCGAGATGTGGGAGAGGGCCAAACAACAACTTTCGAGACTATTGCCGCCAAGTACACGACCTAAAGTATCCACCGCCGGATTTGGTAGAGCAACTTATGGGGTTTCCCGAAAACTGGACGAAGCTCGATTAAAGGCCTTAGGCAATGCAGTGAGGCCACAACAGATCTACCCAATCATGGCTGCGATAAAAGCGATAGATGATGCACTAGGCCGGTAGGCCACCATCCGGCGGAATAATCCCAGGCGTAGCCGGGGGCCGAAACAGATCATTAAGGGAGTAGGAGTATCCCTCCTCTCCCACTAAGGGAGGAACAGGATATGACACAAACACCCAAACATACCTTTTACCCAGATACCCCAGCACCCAAGGAGGTCAAATAAATCATGAACGCATATTTTACAAATCAGCAATTGGATGAACTCAGCAAGGAATACCGCACAATGTCCACGGATGGTGAAGGAAACAGCGTGGAGCCGGAATACAACAGCATGGCCGTACGGGGCGATATTACAAAGCTTGTATCTGATGTGAAACTGTCCCGCAGACAGTTCTACGCGGCCGAGAACGTGCTTGCCGTAATAATCCGTAATTACTCACATGTGCTGCCTTATGACATTACGCAGAGGGCATTGGAGGCCATAGGCAAGGTTGAGGAAGGAGATACCAATGACACTCAAAAAAGGTGACTGGATTAAATTTCAGACTGGTGGGGTTGGGTTGATCATTCGTATGGCAAAGGATAGAAGTTGGGCGGATGTTGATTGCGGACGTTGGTCGAAGAGAGTGCCTAATCCAGATAAGCACCTTAAACCACTAGCAGAACAGGAGGCTAACCAATGACACTCACAAGGGAAGAGAAGACAGAGAGCGACAAGATAATCACCCTTGATGTTATCCGACTTGAACGGCACAAACCACGTAAGTGCACATGTGGAGACGAGAAACATTTCACTGTTGATAAGGTTAATCGTGAAATCACCTGCGATTGTGGCATGACGGTAGACCCGTTTGAAGCGATGTTACACCTTGCTGAACATTACGATCAACTCAATAGGCAACATGAGTCTTTAAACCAGCAGCGTCTGCAATGGTTGAAAGAGAAACCACACTCAGTGATGTTCAAAAGCTTAGAAAGGGACTATCAACGTGGGAAAATGCTTCCGTATTGTCCGCGTTGCGAACAGCCGTTTGACTACAAGAACATTAACAGTCATGTGAGCGCAGAGTATTTTCGAAAGTGGCAAGAGAGGCAAAGAGGAATGTAATTGGCCGTCAGGCCTCCGATTCGACCGCAATACTTAGCGTAGCGGAGGCCGTATATGGTCTGGTACTTAACTTATAAGGGGGCAGAGACCCCAAAGGGAGAGGATAACAGATGCAACAGATAACAATCATGGGAGATTACAAGGTAATTGACGGTCCGTGCGCTGGAGTCAGAGGTCAAGTAATGAGCGTAGAAATTAACGTGGATGTGGACGAGGTATGGCTCCAGGTGGACCCGTTCACATCGGTAGTAACTAATTCTGACAATCTGGAAGAGGTATAAGGGGGAGAAGAGGATATGAGGATCGTTAACCGCAAAGAGTTTCTATCCATGCCATCCGGTACCGTGTATTCCCATTACATGCCGCAAGTATCCGAAGGATTGATGATCAAAGGGGACACATGGACAAACGACTGGTTGTATCAAGACCTTCTGTTCAACGTGGATGGAGAAACATGTGATGAAGCAAGCGACAGACTCACAGATGCAGAAGAGAACGGCACATCCTTCAAGCTGGATCTAAACTGTGGAAGTCGTGACGGAATGTTCGATGAAAACCAACTGTTCATGGTATATGAAAACTCCGATATCGAAGCGCTGATTAAAGCGCTGAAAGGTTGTTTGTAGGCCGGAGGCAATCGAAGCGACCGAAATACTCAGGCGGAGCCGGAGGCCGTATAGGGCTTTCTGCTCCCCATAAAGAAAGGAACAACAAACATGAAACTGATAGACGCAGATAAGCTACTGGAATGGCTGAAAGACAAAGAACAGTATTATGGTACACCGGGAGTTGCTGACAAAATGTACTGCGAAGGTAGAGAAGATGCCTACCGATATACGATGCACGCAATCCACGCCGGCACCTTTGACCCCACACCAGTACAGCCAGACACATTATCGAAATTATACAAATGCCCAAACTGCGAACGCGTTAATATTGCAGAAGCTTGGAATTATGCAACCGCTGCAAAGTATGGAGCAATGGAAATCACTCGGATAGACGAAATTGGATGTATGGATGCATCATTCGTATGTCCATCTTGTGAAACTGAAGAAGACTATGGACGTTTGGAGGTAATAAAATGAGTAGTGGACAAAAGAAACACCGCCGTATCACCCCTATGCCGGTAGTATCCAGTTTCCCGCCGCCCAATAGGCAGACAGTCCACAGTGAATGCATAACTACCCCAATGACCGCAGAGGATTGGGAAAAGTACGGACAGCTTAATCCAACACCACGAAACAAGAGTCACTACATGATGAGCAAGAAAGGCGTGAAAAAGGATGGCAAACAAGTACGGAGCAAGAAAGACGCAAGTTAATGGAATATGGTTTGCTTCTGGTGCGGAGGCTCATAGATACCAAGAGCTAATGCTCCTGAAACGCGCTGGAGTGGTCACAGACATCGTCTTGCAGCCGGTCTATACACTTATGGAGGGTAGAGTAAACAAGGCCACAGGGAAGAAAGTAGCGTCCATAAAATACAAAGCGGACTTTTTAGTAACTTATGCAGACGGTCACCAAGAGATTGAGGATGTGAAAGGATTTAAGACTGCTGTCTACCAGCTTAAGAAACGGATGTTCATGATTCAGTACCCGGATCTTTATATCAAGGAGGTCAGCGCATGA

Protein sequences of DBSCAN-SWA_2

>NZ_CP048429|1317730:1331413|1318499_1319261_+|WP_062519495.1|DBSCAN-SWA
MNQLQNFIYGQQQVRSTVIDGEPWFIAKDVCDVLEVGNPSQAISRLDEDEKNTIILNEGNRGNPTVVIVNEPGLYSLILGSRKPEAKQFKRWITHEVIPSIRKHGAYMTPQTIEQAITSPDFLIQLANKIKDEQEKNKFLEQKIESDKPKVHFAESVEISKDSILVADLAKLLRQKGVEIGEHRLYRWLREEGYLIKSGTEYNRPTQRSMEMGLFEIKTGHRGSSDGTIKLTYTTKVTGKGQIYFINKFLTAA
>NZ_CP048429|1317730:1331413|1327612_1327981_+|WP_062519447.1|DBSCAN-SWA
MTQVQTMTNPELNQALAVLMGWKAGGDPNKKRDFVWWIDENRFRLPENWDPCTDPAASLEVQAKAIEVNYELYVDQLSIVVYGEENYNRASNWNEWDISRLLIASPRERAEAAYITLSQVTT
>NZ_CP048429|1317730:1331413|1329356_1329785_+|WP_062519443.1|DBSCAN-SWA
MTLTREEKTESDKIITLDVIRLERHKPRKCTCGDEKHFTVDKVNREITCDCGMTVDPFEAMLHLAEHYDQLNRQHESLNQQRLQWLKEKPHSVMFKSLERDYQRGKMLPYCPRCEQPFDYKNINSHVSAEYFRKWQERQRGM
>NZ_CP048429|1317730:1331413|1322449_1322635_+|WP_062519472.1|DBSCAN-SWA
MTRQEQLKSELEDWKSWLPIYEGRLNESRTVANREQYLHMVEFSKERIQALEAELQQLKSA
>NZ_CP048429|1317730:1331413|1322022_1322241_+|WP_062519475.1|DBSCAN-SWA
MERKEALKEMDAYLKVCKTCTTRNDKKWANPSYNRLQKHCNTECNTGEKLLRIADVLKDEVRARRKQKGVSA
>NZ_CP048429|1317730:1331413|1323132_1323288_-|WP_074648838.1|DBSCAN-SWA
MSQRVPYATKIEKDLKEKLIKLSELSRIPQSKLMDEAIEDLLKKHAAFFEK
>NZ_CP048429|1317730:1331413|1318258_1318486_+|WP_062519497.1|DBSCAN-SWA
MRHWLKQIRLSKGLTQFQVAEMSGISRSYYADIERGTANAGGSTAKSIADVLGFEMSLFFAQQGRVSRQKSKKSA
>NZ_CP048429|1317730:1331413|1330081_1330411_+|WP_062519441.1|DBSCAN-SWA
MRIVNRKEFLSMPSGTVYSHYMPQVSEGLMIKGDTWTNDWLYQDLLFNVDGETCDEASDRLTDAEENGTSFKLDLNCGSRDGMFDENQLFMVYENSDIEALIKALKGCL
>NZ_CP048429|1317730:1331413|1322631_1323120_-|WP_062519470.1|DBSCAN-SWA
MFKFTMENQLKQFIIDNFNTYFDFGLITTEYSVRGGRIDILGEDDETIYIIEIKRDFVTSDTIVQLQRYLDTYKSDKKLIGIAVAPKIDNSVDLTNVPENIWVNILPDVEYVPNPDSKVKVSVTLDLDVAAYISELAEKDDRSVSSMINVILRNHMKDSKED
>NZ_CP048429|1317730:1331413|1320500_1320743_+|WP_062519487.1|DBSCAN-SWA
MKTRDERTKYIIRHKDGYFIDVAGNQTFDFMKVTKWSDEESLYDFLNHNSYAPPNPLDYTAQRVHITYELIGVDTNVQQE
>NZ_CP048429|1317730:1331413|1323410_1323563_+|WP_157243740.1|DBSCAN-SWA
MNDTKKLKNIPYRLDPNEHKRLKMFCVERGIPMQQLLDKAVQEYLKKWAV
>NZ_CP048429|1317730:1331413|1321389_1321806_+|WP_062519483.1|DBSCAN-SWA
MRKKPKKKVAPWREGILDHHKRHNRLRGAITKVTGEVRAEVNRRSMELMGTDVAVCERCGTSKNLSKGHIVEAAHMGPGYDPANIMNLCGTHGFKGTCHDWCDNEFAGRTWKKQYGAMLRLYYSEGNGKNYWSYKEEA
>NZ_CP048429|1317730:1331413|1320726_1321380_+|WP_074648840.1|DBSCAN-SWA
MCNKSESIVNLAKALVAFNLEVKIIEKDASNPHFKNAYATLDTIVNEVRPILAKHGLVVMQFPGGDGEKYTLRTMLVHESGEWIESEPLTMKPVKNDPQGIGSCTTYARRYSLSAMLSLNTGEDDDGEQSSNAPAQPPAAPPRASNPPANTNTQSTSSGPAALISDAQIRYCHKIKSEKGIPEDDFRAMISAIPGRESIKELTSSEARVFINKLNSM
>NZ_CP048429|1317730:1331413|1319467_1319722_+|WP_062519493.1|DBSCAN-SWA
MAKRREDINKFTLIETHKRYHKPADKPKPSPYRSYTPMCGCGEREAEWEVYETLQPHCTACKDEAMTSTIKPFVRQLGGFDDAS
>NZ_CP048429|1317730:1331413|1330501_1330870_+|WP_062519439.1|DBSCAN-SWA
MKLIDADKLLEWLKDKEQYYGTPGVADKMYCEGREDAYRYTMHAIHAGTFDPTPVQPDTLSKLYKCPNCERVNIAEAWNYATAAKYGAMEITRIDEIGCMDASFVCPSCETEEDYGRLEVIK
>NZ_CP048429|1317730:1331413|1329895_1330066_+|WP_157243738.1|DBSCAN-SWA
MQQITIMGDYKVIDGPCAGVRGQVMSVEINVDVDEVWLQVDPFTSVVTNSDNLEEV
>NZ_CP048429|1317730:1331413|1327977_1328736_+|WP_062519446.1|DBSCAN-SWA
MNHLSLFSGIGGIDLAAEWAGMKTVAFCEREPYPVKVLQKNFPGVPIYDDVKTLTRARLIKDGIVGNGRTIDVVSAGYPCQPFSVAGQREGENDDRHLWPEVKRLLEEIRPRWFVGENVAGHITMGLDSVLDDLDNIAYSAQPFIIPAAASDAQYERERVFILAYADSQRLPGGEITRSSSEMWERAKQQLSRLLPPSTRPKVSTAGFGRATYGVSRKLDEARLKALGNAVRPQQIYPIMAAIKAIDDALGR
>NZ_CP048429|1317730:1331413|1328903_1329206_+|WP_062519445.1|DBSCAN-SWA
MNAYFTNQQLDELSKEYRTMSTDGEGNSVEPEYNSMAVRGDITKLVSDVKLSRRQFYAAENVLAVIIRNYSHVLPYDITQRALEAIGKVEEGDTNDTQKR
>NZ_CP048429|1317730:1331413|1326891_1327170_+|WP_062519450.1|DBSCAN-SWA
MNKLTEMKAAYEILEDGVALIPDYTILAAIALKDFKYLISLLEEKDKALSFYADEDMYFRKPQHQLTFIEADFGKMARKALNTSTNNEGETL
>NZ_CP048429|1317730:1331413|1319331_1319475_+|WP_157243742.1|DBSCAN-SWA
MKVQPQGVNPGLSPQAWYKLHVRLARMNKKYREQLMEAHMKGEKKVG
>NZ_CP048429|1317730:1331413|1327166_1327616_+|WP_062519448.1|DBSCAN-SWA
MTPNEHIEEMGMTISMMGAELLATKKELKGALAALEEAEQKIKEWQDEAKQWRDDFVEKNDELAEAQQQFIGTTYKLEDAQQKLERLKRLNKKLGLAMDVKNARLVEAQQTIARQREALEKIKSDGACAGNNSYYHIAKSALEVGETQP
>NZ_CP048429|1317730:1331413|1326080_1326290_+|WP_062519458.1|DBSCAN-SWA
MNIDVNKVGKRWFICKGDGIDVEATYSHWVDWKNGWKTKRKWTITGKGSKKYRTEIIEQAEKQMNPFHS
>NZ_CP048429|1317730:1331413|1322237_1322453_+|WP_062519473.1|DBSCAN-SWA
MTSGPRVTAKTFWVWTETAAAANPCRIPGAPVEQQFFHYGKNAPAGWLEREYIVDAEDYEGQVDLFGVVNL
>NZ_CP048429|1317730:1331413|1317730_1318084_-|WP_082722521.1|DBSCAN-SWA
MRLKELRKKKGLTQKEAALQLSIPRTTYSGYERGTSEPDFNTLNKLARFYEVDSNWLLGDKKESEYTLPEEIMVRIIKEAEEEFKVSLRDDPVVESAVRELVQHLAKMKMSVNKKNQ
>NZ_CP048429|1317730:1331413|1331068_1331413_+|WP_074648835.1|DBSCAN-SWA
MANKYGARKTQVNGIWFASGAEAHRYQELMLLKRAGVVTDIVLQPVYTLMEGRVNKATGKKVASIKYKADFLVTYADGHQEIEDVKGFKTAVYQLKKRMFMIQYPDLYIKEVSA
>NZ_CP048429|1317730:1331413|1325248_1325932_+|WP_062519462.1|DBSCAN-SWA
MSYYDEDYYNEPSEFEQQVDAFKESLLNAVKEEHKAEIERLRKENAELQEVKQNLESIKREYNQKVAELGIQKNNLKNEVRRERLLELMGDFKAELFSPRTKWMSGPKCNKCDDKRRIPFLSPSGKEMVEDCSCKNNILIYEPRTNICSSFEVRNGKFMAWYKSYSVDRADGMELESLGVSDVAKFIWAGEKFEDIKDYYKAYFKTEEDCQSYCDWLTDQESNKVKS
>NZ_CP048429|1317730:1331413|1319958_1320186_+|WP_062519489.1|DBSCAN-SWA
MEVKYLFTMGGKSAAANNYNNHPKMEIFTLSIDKGDIKMETHMNLEDMENLAQEMMEYVQEVKEHAAVLIEMGKV
>NZ_CP048429|1317730:1331413|1324299_1325220_+|WP_082722516.1|DBSCAN-SWA
MESMGQVMQDLLKRVERLRAEALKTSSEAPDENQDLPPKKYNDAPAISTEGCEKCDYTGTINTFRWEQPEGYQIPVQIAVVENCSCHTERMFQKYNASESFNAKERGYTFKTATIDNMNREQFGVAIDFVRDIKRHLELGTWLYIFGDDARVPGASKEQGAILNAYGTGKTYLMQCMANAFSYRKIPAIYVTEERLFSDIKATYNRASEDSEDEVLQRYYSVPILMIDDIFTAQYKEWAEGKLFSIIDERQKNNKVTIMTSNYSLGRIRERLPMNGGKIGSRIDGKAIQIEMLGPDRRALNKNESA
>NZ_CP048429|1317730:1331413|1326569_1326899_+|WP_062519452.1|DBSCAN-SWA
MEKKSINFWETSNMAVQIRRMCCPECEGEFYEIDDHVLEDCPICHVALFDEPETMEWDSTTYTLIVDHKTGVPSVIRNDEYEPVLRDSAIVPTESAQASAGGRIGGSHE

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082722521.1|1317730_1318084_-	helix-turn-helix transcriptional regulator	A0A2P1JU09	Anoxybacillus_phage	5.3e-07	35.2
WP_062519497.1|1318258_1318486_+	helix-turn-helix transcriptional regulator	A0A290G4F8	Caldibacillus_phage	4.9e-06	46.6
WP_062519495.1|1318499_1319261_+	antirepressor	R9VWW9	Paenibacillus_phage	9.9e-75	57.4
WP_157243742.1|1319331_1319475_+	hypothetical protein	NA	NA	NA	NA
WP_062519493.1|1319467_1319722_+	hypothetical protein	NA	NA	NA	NA
WP_062519489.1|1319958_1320186_+	hypothetical protein	NA	NA	NA	NA
WP_062519487.1|1320500_1320743_+	hypothetical protein	NA	NA	NA	NA
WP_074648840.1|1320726_1321380_+	ERF family protein	A0A0M3ULL1	Bacillus_phage	6.3e-46	70.2
WP_062519483.1|1321389_1321806_+	hypothetical protein	NA	NA	NA	NA
WP_062519475.1|1322022_1322241_+	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_062519473.1|1322237_1322453_+	hypothetical protein	NA	NA	NA	NA
WP_062519472.1|1322449_1322635_+	hypothetical protein	NA	NA	NA	NA
WP_062519470.1|1322631_1323120_-	DUF91 domain-containing protein	NA	NA	NA	NA
WP_074648838.1|1323132_1323288_-	ribbon-helix-helix domain-containing protein	A0A0A7RUX5	Clostridium_phage	3.7e-05	60.5
WP_157243740.1|1323410_1323563_+	hypothetical protein	NA	NA	NA	NA
WP_082722516.1|1324299_1325220_+	ATP-binding protein	A0A1W6JP70	Staphylococcus_phage	1.6e-10	33.6
WP_062519462.1|1325248_1325932_+	hypothetical protein	A0A2H4JB05	uncultured_Caudovirales_phage	2.1e-44	46.2
WP_062519458.1|1326080_1326290_+	hypothetical protein	NA	NA	NA	NA
WP_062519452.1|1326569_1326899_+	hypothetical protein	NA	NA	NA	NA
WP_062519450.1|1326891_1327170_+	hypothetical protein	NA	NA	NA	NA
WP_062519448.1|1327166_1327616_+	hypothetical protein	NA	NA	NA	NA
WP_062519447.1|1327612_1327981_+	hypothetical protein	NA	NA	NA	NA
WP_062519446.1|1327977_1328736_+	DNA cytosine methyltransferase	A0A0C5ABP5	Bacteriophage	1.4e-73	55.5
WP_062519445.1|1328903_1329206_+	hypothetical protein	NA	NA	NA	NA
WP_062519443.1|1329356_1329785_+	hypothetical protein	R9TLR2	Paenibacillus_phage	2.6e-56	73.6
WP_157243738.1|1329895_1330066_+	hypothetical protein	NA	NA	NA	NA
WP_062519441.1|1330081_1330411_+	hypothetical protein	S0A240	Cellulophaga_phage	1.3e-20	44.7
WP_062519439.1|1330501_1330870_+	hypothetical protein	NA	NA	NA	NA
WP_074648835.1|1331068_1331413_+	DUF1064 domain-containing protein	A8ASP7	Listeria_phage	7.2e-17	48.0

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP048429|1352870:1361686|DBSCAN-SWA
ACTGAGTAGCCCCACGGCTAGTGCTAGTGGGGCTTACAAAAATTACTACAAAGCATCGGCGGATGCAAAATCAAATCCGAAGAATTATGAAATCGCATCTTCGGCCATATCTCAATCCTTAAGAGCGGCAGGTAAGCCCGCAGAATGGCAGAAACCACTCGAAGAATTGGTTGCTCGGGAGAGCAGTTTTAATCCCAATGCCAAAAATCCTAAATCTACGGCTGCGGGATTATTCCAGTTTTTGAATGGCACTCGTAAAAATTATGGTGGTAACAGCGTAGACTGGTCAGATCCATACCAGCAAGCCAGTAAAGGACTTCAGTATGTAATAGACCGGTATGGAGATCCTTACAAAGCCCTTCAATTTTGGGACAAAAATAAGTGGTACTAAGGAGTTGACCTAATGTCCACATTTGATGCAGTACGCAATCGAAAACGGGGAGAGGATGCAAAACAACGCGTCTTAAATCGCACATATAACCCTCAAACAGAGCAAGAATCAGAAAGTAAGTTTTCAGCCGTGCGAAATCGCCAGATTATTGACACAACCGCAGAAGATAACGCCAGAGGAAAAACTTTATTAGATAGCACACTTGCTAGTGTAGGAAAAGGACCACAGGTGCAGGGATTTAACACTACACCGGAGCCGATGAAGCCAATTGACTTCAAGGCAGATCAAGCTAAGCAAAAGCAAATTGAGGCGTTTCAAGGTAAACTCCCAGCGCCGTCAGCACTGAACATTCCGGTGACGTCTTTGCAGACTCAACTGCAAGGGCGCCTACCGGCAGCAAGTGTACTGAATCAAACTGGCGGAGGTCCAGCTGCTCCGGTTAAACCAGTCACAGAATACGATATCCGGCAAAAAGCGATTGACGAAACAAACATGCCGGACGTCCTTAAAACAGTACCCAGTGCACTAAACTATCTGGCCTTCGGTAACCCCGTGGGCCGTTTTATTTCCAACTCCTTCGCGGGTAACTCTGGTGTAACCCAACGCGACTCTACGGGTAACGCCACGGCTGACAAAGTATCAAATGTCATCAATAATTTAGTCACGCCATTCATTACTCCGACTGGTGCCCCGGTAGGGTTGGGGCCAAATGCGGCGCCATATGAGGCAGCTGGAAAGTTAATGAACACAGGTGCTGCAATGAAGGCGACCAATGCAATTTCTAAGGTAATCCCGAAGGTAAGCCCATCAACGGCTAACAATATCGTACGAGGAGGGCTGACAGAAGGATTGGCAGGAACAGCCCAGAACGTAGCTGCTGGTCTAATGAACCAACAGGATAGTAATAAGGATATTCTGCGTAATGCTTTGATCGGTGGAGGATTTGGGTTAGGCCTGGGCGCTGCGGGAGGCGCTGTGCGCTCGGGGTTTGAGAAGTTCGCCGATGTACGCGCAGCAAGAAAGTCAGGAACGCCAGAAGCTCCTGTGGCGGCAGAAACACCTTCAGCACCTATTGATACGACACCAAGTATGCAGCCGGTTAGAACTGTACAGGAACCGATTACTGAGGCGCCAGAGCCTATTGCAACTGCACCAGAAACCAAAAAACCTGTGGTTGATGAAAATCTCAGCGCTCGGGACCGTGAAATCCTAAGTAAGCCCGTATCCGAATGGACACAAGATGATATTGACTATGCCATGCAGTCTTCTAAGGAAGCTGAAGCAACTTTGAAGTCTACCCCGGCGCCAGAGCCTAAGCCAATTGCTGAACCAGAACCAATCAAAACACCGGTTAAAACAGAGGTTCAGGAAGTCGAGGAAGCGATTCAAGCCGTCAACCATCCAAACGTACGGGATAAGGTTTACACCTACCTTGACGAGGCAGAGAAGGCTGCTAGAGAACGGTTGGCAAAGCGTAGAGGCAACCTGAACTCCAACCCGTTACCAGAATGGGCTGACTATGCGGTTATTATGGCTTCTAAGCTTGGAAAGGGCACCATCAAAGCTGCAAATTTCACGGAAGAACTGGTAAAGGAGTTTGGCGAGGCTGTCCGTCCACACGCAGAGAAGATCCTGCGCATGAGTCGAGAGGAACTACGGCGCCAGGAACGATTGGCAAGCGATGAAGGGAAGGCCGCCGCTGAGTTCAATGCTAAACCCGAAGGCGATTCAGCATCATTCAGAGAGAAAATAAGCCGTAACGTTTCAAAGAAGTCAACGCCATTTTCCGAACGGTGGCAGAAGTGGCGTACACAAACCACAGACGATCTAGCAGCCCTTGAGACGGTAGAAAAGAACGTGCGTGGGGGAAAACTAGCCAGCGCAGAAGACAGCCTATATAAGTCTGCTAGACTCTTCAAGGGTGCGCCGGAAAGAGCAAGCCGTATTGTACAAGATAGACTTGGCCCTGTAATCAGCAAAGTAGAGAGCATGGGTAAGACTGCTGAAGACTTAGAAGATTATGTGCTTGCGATGCATGCAAGAGATGTAAACGCCGCGGGATATAAGTCTGGTTACACCAATCAGGAGATTAAATCAATCATCGATGAACTGGATTCACCCGAAATGAAAGCAGCACAGCAAGAGCTTGTGAAAGTAAACCGCGATATGCTAAAGGAACTGGTAGACAGTGGCGTGGTATCGAAGGAACTGTATGACGTGCTGGGCGAACGCTGGAAGAACTATATCCCACTGTTCCGTGAAATGGATAACGAAAAGGTGGGATTCGGCGGCGGGTTATCGAGTGCTCTCGCCAACGTAACCAGCCCGATTAAGGCATTGCAGGGGTCAGAGCGAAAGGTTATCGCACCACTGGAAAATATGGTGAAGAACATCTTTCAAAGCGTAAATGCTGCCGAACGTAATAATGTGGCCCGGCAGATACCAAAGCTTGCTGAACTGGATGGAAACGGTACATTCTTCCGCAAACTCACCAATGCCGAGCAAGTAGGAGAGAAAAACGTAGTCAAGGTTAAGGTAGATGGCAAGGAAGTCCGGTATGAGGTTCAGCCTGAGGTATACAAGGCACTGATGAACCTGGACAAAGAGTCCAGTAATACGTTGATAAACATCCTTTCCAAACCAGCAAGCTTGCTAAGAGCTGGCGCCACTCTGACACCAGAGTTTGCATTGCGCAACCCAATTCGTGATATCAACAATGCTTTCGTTGTCTCGGAAAGTGGATTCAATCCTATTACCGACTTTGGCGCCGGGTTGATCCAGACCATCACGAAAGGTCCATTGTACAAAGAGTGGATTGATAACCTGGGAGCTTACGGAAATACGCTTTCTATGGATAGAAATCTTCACAGAAAAGCCTTGGAAACGGTTCTGAAGCAGCCGAATTCGAAAAAATTTGTCAATTTGGTTAACGGTAAGTCACTGATTGGACTATTGAGAGCCATTTCAGACACAACGGAATCAGCGACCAAGGTCGGGGAGTACCGAGCAGCACTGCGTTCTGGCGCCAGCAAGCAAGAGGCAGCGTACCGGTCCCGTGATTTGATGGATTTTGCCCGCGGTGGAGCTAGTGTGAGGCCTCTAAACCGTGTTGTTTCATTTTTTAATGCTAATGTTCAAGGTAAATCAAAACTTATAAGAGCAATTAAAAATGATCCCTTAGGCGTTGTGTCTCGTGGATTTGTTTCTGTTACAGCACCAACAATAGGTATCTTTATCGCTAATCGCGAGTTTGCAAATAAGACACAAAAGGATACTATTGCTAATGCTCCAGATTGGATGAAGGACTCCTTCTGGTTACTGGCTGTTCCGGGTACAGATACTGTGGCTCGTATTCCAAAGCCATTTGATTTGGCAGCAGTATTTGCTAATCTGCCGGAAAAGGCACTGGACTTTGTGTTTAACAAGGACTCTGCAGCGTTTGATGGATTTGCACGGCGAGCATTGAAAGATTCTTCATTGCCAACACAAATTTCTGGATTGCTCCCACTTTATGAAGGATACTCAAATTATTCTTTCTTTAAAGAAGGTCCTATCATTCCACGTTCTGAGCAAGGATTAGAATTCTCTGACCAGTATGACCCGGTTCGCACTACGACATCTGCTAGGATCATTGCGGGTGGCGTAGAGAAGCTTACTGGTGGTAAAGGTACATTCAAGAACTTCAGTTCACCGCGAGTGATCGACAATACACTACAGGGATTGACCGCTGGTGTTGGTAAATACGCCACGGACGTTGTGGACCTGATCTTGGATAAAACAGGAGTCTATGAGCGCACAACAAAGCCAGCCAAGTCCATTGAGCAGGCGCCGTTTACCCGATCATTCCTGGTGGATCCGAATCAAGGCGGCAAGGCCATGGATAAGTTTTATATGAAGAAAGACGAACTGACCAAGGAGAAAGCATCTGCCAAACTGAACAAGGTACCATTTAAAAATCAAGGTCAACTGGACCGCATCAATAATGTATCGGATGCAGTAAGTGACATCAACAAGAGGATTAAAGCGATAGAACGTGGTCAATTGTCTGCCAAGCAAAAGCAGTTGAAGATTGAACCACTTATCAAACGCCGTAATGAGATGATCCAGCGTATCACACAAAGCTTGAAGGACAAAAAATAATGAAAAACTTCATCCAATACGACGAATCAGAATATTTCAATAGTCCTGTGACAGATTTCACCCTACAATTCATCGAAGGCTTGTTTGGCCCTGAAGTAAAGGACATGCTGCTATACAAGGTGGTGGAACATGTGGAGCATACTAGAGACGCTGTATGACCTGACTTACTTCATAATAAAGAACATGGAGGGCCTCAAATGGGAGGCCCTTTTGTTCTACCTATTTTACCTGTTTGGCAAGCGTTCGGGCATGAAGATGTTTCGCAAGTTCTTGCAGAACCATTTCCCTTTGTTTAAGGAGGAAAGCGAAGAGTGGCGAAAGTATGTGGGAAAGCAGATCGTAAAGCTTGGCGGAGAACCGTACATCCCCGTAAGAGAATATGGGCGTTCGACGTTATCCGAGAAGTCGGAAGCGAGGAACTTAACTACATCATCGACATTATCACAGGAGGGCATAGACCCGGAAAGGCGGCACCTGATGACGGAAAAGATATATGACGTTTTAGGCGATCCAGGACATGGAGGTCACGACACAGGCGCAATCAGTGTAACCGGAGTCAAAGAAAAGGACATCAATTTGGCGGTTGGCCTAAAGGTAAAGGAACTACTGAAAGATAATCCGCGAATAAGATTCACCCTTACCCGAGAAACTGATGTTTTTGTTCAACTCAGTGACCGAGCAAAAATGGCAAATAAGATGAAGGCAGAAGCGTTTATATCCATCCACGTGAACAGTTTCAAGCCTGAATCAACTGGAACGGAAACGGAATATACCCGCACAGGAGATAGTGTTAAGCTGGCGACAATCCTACAGAAGCATCTTGTTCAGGCTACCGGATTCAAGGATCGCGGCATAAATAAACTCAACCTCGCTGTTACCCGAGAAACTAAGATGGCCGCAGCGCTGGCAGAGCCGGGCTTTCTCAGCAATCCAGCAGAGGAAGTGATACTGGTGTCACCAGACTTCATCCCGCGCTATGCCGAAGCTGTGGCCCGCGCAGCCTGTGAGTACCTCGGTGTACCTTATAACACCACTGTTGGAGTAACACAACCAGTAACGGTCTGTATAGGTGATCTAAATCTGAGTACGCCCGGAATCATCATTGATGGTCGGAGTTGGGTTCCGGCTAAAATGACGTTATCTGCTCTAGGGTTTATGACGTGGTATTTTCAGGATAAAACAGTGCATATCAACAGTACACCAGTGGAGACAAAGATTTTTGACAATACGAGCTATATCCGTTCAGTAGACCTCATGAGCTTGGGGATGGTCCGTAGTGTATTTATGGAGCCGGATGCGACCAACCCAAAACGAGTCTTAATCATACCTAAGGAGGGTTAATCATGAAAGAAATATGGGATCAAGTACAACCGCAGGTGGCTACAGTTGCTGTCGCTGTTGTGGGCATATTAGCAACTATCGTCCTTTCTATGCTGGCCTTGTTGCAAAAGAGAGTGAAACTATGGATCGATAGTAAAACGTCTCTGGCAGAGCGTGAGTTGATTCACAAGATTGCGACCGAAGCCTATGCATTTGCGGAAAAAGAATTCAATTCATTAGGTGGACATACAAAATTAAGTGAGGCTTACAACTATGCCTCCAAGATGCTTGATAAGGCTGGAATCCAAGTAGCGCCAGAGGAAATAAAGTCAGCTATAGAAAAGGCAGTGTTGGATTACAAAAAAGCTTCCTAACGGGGGCTTTTTTTATTTCACTTATAGGAGGAACCTATGAAAAAACTACTAGTGATTATATTTTTTCTTTTATCGGCATCACCAGCATACGCCTACAAATATAATGAACCACATACTTTTCAATCAGAGTTAGAATCAGCACGTAGCAAAACTGTACAAATCGTCCTAATCAACGAACACCGTTACCCATGGGCGACCACATCAGAAATCACCAGCACAGGCACCGGTACACTGCTGGACGATGGGTATATCCTTACCAACGAACATGTTATTTCTAGCGCACATACAGAAATAGTCATAAATACTTACGACAAGCAACGATATAGCGCCATGCTGATAACCTCAAGCTTGAAACTGGACTTGGCGCTCCTGCACATCAATAGTAACTCCAAAGGATTTGTGCTATCTGACATAGAGCCATACGCAGGGGAATCTATCATGACTGTAGGCCAGCCCGCAGGACTGCCATCCTGGAGTTTTGCTGAGGGCACCATACAAAAGGTAGATCAACCCGCCACAATGACCACAGGTGAGTCATACACAGCCATCATGACGGATGCAGAGGTAAAACAGGGTAACAGTGGCGGGCCTTTGATCAATGATCGTGGGGAACTGGTGGGCATTGTGAGAGCTGCGAACGTGGGACATTCTTTTGCGGTTCCACTGAGCGACATAAAATCATTCCTGGTTTCTAAAGAACATCCGTTTGGATATAATACAGATAAACGTAAAGTACCGGAGGATCACAATGGATGAAGGCAAAATGAACAATCTACTTACAATGGAAGAAAGAACAATGGTCCGGGACCTGATCTTGCTACCATACATAGACACGATGGTCAGCAACAGCATGAGAGAAACGGAACTGTCAGGCAACGTCTTAGCAAAGACGTACCTAATGGCCGGACAATACATACAAAAACGGATCATGCAGGATATATATCGTTTACGTCAAGAATTGAAGCAGCGGAATGTCAAAGTGGTTGAAGATAAGAACGACGATTTTATCATCTATAATATGATCTATTACCGTGGCTATCAGGAGCGCTTTGGCATGACCCGCGATGTCATGAAGACGGAAATCAGTCTGAGGCTCACCCAATACACCGCTGATTATGGAAGTGTATTGAATGATTATCTGAAATGAGAAAACCTCGGACTAATTCCCGAGGTTTATTTGTATTTATAATGAAGAAACATGCAATATCGTGTGTAAATTAACATCTACGGTTAGGCGTCGAGCTCGTCAATGATGACGAGGTCAAAGCTCTGGTGGAAGCGCAGCAGCTGATGGGTGGTGGCCAGGGTCAGCTGGCCAGAAGCCCAGCGGTCTGCGCTGCCGCCGTACAGCACGGCGAGTGTCTCCGCCGGGAATGCCCGTGCGAGCCGCGGCGCCAGCTCCAGCACAACGTCGCGCCGCGGCGTTGCGACGAGTGCGCGGCCTCCGGCAGCGAGCACTGCCTCCAGGAGCGGGAACGTGATCTCCGTTTTCCCCGCTCCCGTGACGGCCCAGAGCAGGAACCGCTCTGGGCTGGATACGGCGGAGCGCTGCCGCGGCTCCGCCAGGAACCCCAGCGCAGCGCCGGCGGCTCCCGCCTGCGCCGCGCTTAGCCCCCACCGGCGTGCCGCCACGGTGGGCGAACCCCCGGCCGTGCACCGCACGGCCGGAGAAGCCGCGCTGCGCAGCAGCAGCGCGCAAGCCCGGCTGCGCCCGAGTGCGAGGCAGGCCTCGCAATAGGCGCAGCCCGCAAGGCCGCACGCGGCGCAGGCCGTGCGGCCCGTGGCAGCGCTGCCGCAGCGCAGGCAGCGCAGCTCCGCGCGGCGGGCGGCAGCGCCGCGCCGGGGCAGGCGCAGCTGCGGCAGGCGGAGCGCCGCAGCGTGCAGGAAGCGGCCGGCGAGGGCAGGGAGCCGGCCGCCAGGAAGGCGCGCGAAGGCGCCGCGCGCCGTGCTGCGAAGCGCAGGCGCTTCCCCCACAGCGGCCTCCAGTCTCAGCCACCCCTGGAGCTGGGCAAGCTGGGCTGCTGCACGCCACTGTCCTGCCATCCCGGGAAGCCGTTCCGCAAGGAGCGCTTCCACCTCAGGCTCCAGCAGCGAGCGGCCCTCCAGCGCTTGTACCAATTGTTCTGCCGCTGCTCCAAGAGCCAGGTGTCTTCCGCCTCCTTCAGCGTCTAGCACCGGCCTGTACTTCTCTTCCTTCCTATACGCCTTCCCATGTTGTACAGCAGTAACCTCCGCTGCATTAACCAACGTACAGACAAAAACCTCTTGATATAATCTCTCCTCGCACCAGCCTCCTCCTGCATCCCGTTCCCCGGCAATCTCTCCCTTAAGTACCTCTGTCATATATTTTCCCCAGTCTTCAACCTGCCATTGCCGCCCGGCTCGGGTTGATCTCCAGCTCTCTCTGAGCTTCACAGCCCAACCCAGGGGAAGCGCGGAGGAGAGGATCACCAGCTTGTCCACAGCCCTGGTATTCCAGCCCTCCCGTTCTTCTCCAGTCCCGCTCCACCATAATCTGTCTACATTCATATCGAGTGAAACCCGTATATTCCAATTCCCGTCAAGCTTTACTGCATAGACAGCAGTTTGCAC

Protein sequences of DBSCAN-SWA_3

>NZ_CP048429|1352870:1361686|1359857_1360241_+|WP_157243736.1|DBSCAN-SWA
MNNLLTMEERTMVRDLILLPYIDTMVSNSMRETELSGNVLAKTYLMAGQYIQKRIMQDIYRLRQELKQRNVKVVEDKNDDFIIYNMIYYRGYQERFGMTRDVMKTEISLRLTQYTADYGSVLNDYLK
>NZ_CP048429|1352870:1361686|1359130_1359850_+|WP_062519381.1|DBSCAN-SWA
MKKLLVIIFFLLSASPAYAYKYNEPHTFQSELESARSKTVQIVLINEHRYPWATTSEITSTGTGTLLDDGYILTNEHVISSAHTEIVINTYDKQRYSAMLITSSLKLDLALLHINSNSKGFVLSDIEPYAGESIMTVGQPAGLPSWSFAEGTIQKVDQPATMTTGESYTAIMTDAEVKQGNSGGPLINDRGELVGIVRAANVGHSFAVPLSDIKSFLVSKEHPFGYNTDKRKVPEDHNG
>NZ_CP048429|1352870:1361686|1358743_1359094_+|WP_062519383.1|holin|DBSCAN-SWA
MKEIWDQVQPQVATVAVAVVGILATIVLSMLALLQKRVKLWIDSKTSLAERELIHKIATEAYAFAEKEFNSLGGHTKLSEAYNYASKMLDKAGIQVAPEEIKSAIEKAVLDYKKAS
>NZ_CP048429|1352870:1361686|1352870_1353260_+|WP_082722515.1|DBSCAN-SWA
MSSPTASASGAYKNYYKASADAKSNPKNYEIASSAISQSLRAAGKPAEWQKPLEELVARESSFNPNAKNPKSTAAGLFQFLNGTRKNYGGNSVDWSDPYQQASKGLQYVIDRYGDPYKALQFWDKNKWY
>NZ_CP048429|1352870:1361686|1360324_1361686_-|WP_062521257.1|DBSCAN-SWA
MQTAVYAVKLDGNWNIRVSLDMNVDRLWWSGTGEEREGWNTRAVDKLVILSSALPLGWAVKLRESWRSTRAGRQWQVEDWGKYMTEVLKGEIAGERDAGGGWCEERLYQEVFVCTLVNAAEVTAVQHGKAYRKEEKYRPVLDAEGGGRHLALGAAAEQLVQALEGRSLLEPEVEALLAERLPGMAGQWRAAAQLAQLQGWLRLEAAVGEAPALRSTARGAFARLPGGRLPALAGRFLHAAALRLPQLRLPRRGAAARRAELRCLRCGSAATGRTACAACGLAGCAYCEACLALGRSRACALLLRSAASPAVRCTAGGSPTVAARRWGLSAAQAGAAGAALGFLAEPRQRSAVSSPERFLLWAVTGAGKTEITFPLLEAVLAAGGRALVATPRRDVVLELAPRLARAFPAETLAVLYGGSADRWASGQLTLATTHQLLRFHQSFDLVIIDELDA
>NZ_CP048429|1352870:1361686|1353272_1357400_+|WP_062519387.1|DBSCAN-SWA
MSTFDAVRNRKRGEDAKQRVLNRTYNPQTEQESESKFSAVRNRQIIDTTAEDNARGKTLLDSTLASVGKGPQVQGFNTTPEPMKPIDFKADQAKQKQIEAFQGKLPAPSALNIPVTSLQTQLQGRLPAASVLNQTGGGPAAPVKPVTEYDIRQKAIDETNMPDVLKTVPSALNYLAFGNPVGRFISNSFAGNSGVTQRDSTGNATADKVSNVINNLVTPFITPTGAPVGLGPNAAPYEAAGKLMNTGAAMKATNAISKVIPKVSPSTANNIVRGGLTEGLAGTAQNVAAGLMNQQDSNKDILRNALIGGGFGLGLGAAGGAVRSGFEKFADVRAARKSGTPEAPVAAETPSAPIDTTPSMQPVRTVQEPITEAPEPIATAPETKKPVVDENLSARDREILSKPVSEWTQDDIDYAMQSSKEAEATLKSTPAPEPKPIAEPEPIKTPVKTEVQEVEEAIQAVNHPNVRDKVYTYLDEAEKAARERLAKRRGNLNSNPLPEWADYAVIMASKLGKGTIKAANFTEELVKEFGEAVRPHAEKILRMSREELRRQERLASDEGKAAAEFNAKPEGDSASFREKISRNVSKKSTPFSERWQKWRTQTTDDLAALETVEKNVRGGKLASAEDSLYKSARLFKGAPERASRIVQDRLGPVISKVESMGKTAEDLEDYVLAMHARDVNAAGYKSGYTNQEIKSIIDELDSPEMKAAQQELVKVNRDMLKELVDSGVVSKELYDVLGERWKNYIPLFREMDNEKVGFGGGLSSALANVTSPIKALQGSERKVIAPLENMVKNIFQSVNAAERNNVARQIPKLAELDGNGTFFRKLTNAEQVGEKNVVKVKVDGKEVRYEVQPEVYKALMNLDKESSNTLINILSKPASLLRAGATLTPEFALRNPIRDINNAFVVSESGFNPITDFGAGLIQTITKGPLYKEWIDNLGAYGNTLSMDRNLHRKALETVLKQPNSKKFVNLVNGKSLIGLLRAISDTTESATKVGEYRAALRSGASKQEAAYRSRDLMDFARGGASVRPLNRVVSFFNANVQGKSKLIRAIKNDPLGVVSRGFVSVTAPTIGIFIANREFANKTQKDTIANAPDWMKDSFWLLAVPGTDTVARIPKPFDLAAVFANLPEKALDFVFNKDSAAFDGFARRALKDSSLPTQISGLLPLYEGYSNYSFFKEGPIIPRSEQGLEFSDQYDPVRTTTSARIIAGGVEKLTGGKGTFKNFSSPRVIDNTLQGLTAGVGKYATDVVDLILDKTGVYERTTKPAKSIEQAPFTRSFLVDPNQGGKAMDKFYMKKDELTKEKASAKLNKVPFKNQGQLDRINNVSDAVSDINKRIKAIERGQLSAKQKQLKIEPLIKRRNEMIQRITQSLKDKK
>NZ_CP048429|1352870:1361686|1357529_1358741_+|WP_062519385.1|DBSCAN-SWA
MWSILETLYDLTYFIIKNMEGLKWEALLFYLFYLFGKRSGMKMFRKFLQNHFPLFKEESEEWRKYVGKQIVKLGGEPYIPVREYGRSTLSEKSEARNLTTSSTLSQEGIDPERRHLMTEKIYDVLGDPGHGGHDTGAISVTGVKEKDINLAVGLKVKELLKDNPRIRFTLTRETDVFVQLSDRAKMANKMKAEAFISIHVNSFKPESTGTETEYTRTGDSVKLATILQKHLVQATGFKDRGINKLNLAVTRETKMAAALAEPGFLSNPAEEVILVSPDFIPRYAEAVARAACEYLGVPYNTTVGVTQPVTVCIGDLNLSTPGIIIDGRSWVPAKMTLSALGFMTWYFQDKTVHINSTPVETKIFDNTSYIRSVDLMSLGMVRSVFMEPDATNPKRVLIIPKEG

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082722515.1|1352870_1353260_+	lytic transglycosylase domain-containing protein	G1BNB6	Mycobacterium_phage	3.8e-14	51.6
WP_062519387.1|1353272_1357400_+	hypothetical protein	A0A0A0RPU4	Bacillus_phage	5.9e-206	45.0
WP_062519385.1|1357529_1358741_+	N-acetylmuramoyl-L-alanine amidase	M4ZRP4	Bacillus_phage	2.2e-20	39.8
WP_062519383.1|1358743_1359094_+|holin	phage holin	D0R7H9	Paenibacillus_phage	3.5e-19	46.9
WP_062519381.1|1359130_1359850_+	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	1.1e-09	28.6
WP_157243736.1|1359857_1360241_+	hypothetical protein	NA	NA	NA	NA
WP_062521257.1|1360324_1361686_-	hypothetical protein	A0A1X9I5S6	Streptococcus_phage	1.9e-12	47.4

Sequences of DBSCAN-SWA_4

Nucleotide sequences of DBSCAN-SWA_4

>NZ_CP048429|2354129:2363369|DBSCAN-SWA
AATGTATCCCAAAGATTTAAACTATACAATGCCGCCGGAATGGGGCGAACATGAACGCACGTTTATTTCCTGGCCAGTTCAGGCTTCCATGGTGTTTCCGGATAATTATGAAGCGGTGAGCGCCGGCTATGCCGAGATTATCCGGGCCATTGCCGAGTTCGAGCCGGTAACCGTGGTAGTCAATCCCGAAGAGCTGGAGCAGATAGAGAAGCTGGCTCTGGGAGACAACGTTACATTGCTGCCGATCCGGCATAATGATGCCTGGCTGCGTGACAACGGCCCGACCTTTGTGAAGGGTGCGGATGGCGCTCTTGCAGGAGTGAACTGGAAATTCAATGCCTGGGGCGGCAAATATTCGCCTTGGGATCTTGATGATGAGGTGGCTCCGCAGATTCTCGAGCAGGTCCAGGTGACCCGTTACGATGCTCCGCTGGTCATGGAAGGCGGCTCAATCCATACGGACGGTGAAGGTACGCTCATTACCACCGAGGAATGCCTGCTGAACAAGAACCGCAACCCGGAGCTGGACCGGGAAGAAATTGAAGAATACGTGCGGAAATATACGGGCACAGAGACCATCATTTGGCTGAAACGCGGCCTAAGCGGGGATGAAACGGATGGTCATGTTGACAATATTGCCTGCTTCGCTGCACCTGGCAAGGTGATTATCCAGGTCTGCGATGACCCGCAGGACGAGAATTATGAGATTACACGGGAGAATTTACGCATTCTGGAGAATGCCGTGGATGCCAAAGGCCGGAAGCTGGAGATTGTCACCATCCAGCAGCCGCCTCGTACCGACTATGACGGCAGCCGTCTGACGCTCAGCTATTTGAATTTTTATTTTGTGAACGGCGGGATTATCCTGCCGGTGTTCGGCGGCACCGCCGCTGAGACGGATGCGCTTGCCGAAGAGAAGCTTGCTGCACTGTTCCCGGACCGCAGAATCCGCACAGTGGACGGAATGGCCGTGATTGGTGAAGGCGGCAATGTACACTGCACCACCCAGCAGATGCCTGCCGGGAGATCATCTATTTATGCAAGGAGGACAGAACTGTGAGAAACGTAAAAGTAGCCGCGACGCAAATGAGCTGCTCGGGCGACATTGATGAGAATATCCGCAAGGCGGAAACACTGGTTAGAGAAGCTGCAGCCCAAGGTGCGCAGATTATTCTGCTGCAGGAGCTGTTTGAAACCCCGTATTTCTGCCAGAAGGAGAAATCCGATTATTATGCTTATGCCACTGAGCTTGAGCACAACAAAGCGGTGAACCATTTCAAGGCCATCGCCAAGGAGCTGCAAGTGGTGCTGCCGATCAGCTTTTATGAAAAGAAAAACTATGCCCGTTACAACTCCTTGGCCGTGATTGATGCCGATGGCACGGTGCTGGGCAAGTACCGCAAAAGCCATATCCCGGATGGCCCAGGCTATGAAGAGAAGTTCTACTTCAATCCCGGGGATACCGGATTTAAGGTGTGGAACACCCGCTATGCCAAAATCGGCGTAGGTGTGTGCTGGGATCAATGGTATCCGGAGGCAGCGCGGGTAATGAGCTTGATGGGTGCGGAAATTCTGTTCTACCCAACGGCCATTGGTTCGGAGCCGCAGGATGGCTCAATTGATTCCAAAGACCACTGGCAGACCTGCATGCTGGGCCATGCGGCGGCGAATCTGATTCCTGTCGTAGCCTCGAACCGGATCGGAGAAGAAACCGATGAGGAGTCCAGCATTAACTTCTACGGCTCTTCATTTATCGCTGGCCCGCAGGGCAACAAGATTGTTGAAGCCGGGCGGGATGAGCAGACCGTACTGGTCAGCGAATTCGATCTTGACGCACTGGAGGTTGGCCGGATTGAGTGGGGAATCTTCCGCGACCGGCGGCCGGAGCTGTACCGGATGATCGCTTCGTATGACGGAGATTTGACGTTTTAAGTATAAGCAAGCGGTAAAAACCATTAGAACCCATTAGGGAACCGCAGCATAGCCAGGCACCGCCAGGAGGATGAGCCTCTTCCGGCGGTGCCTTTTTTTGATGCAAAAACGTTTGTATGGCAGGAATTTTGCCGTATTTCCGAATTACGGGACGGAAAAAACATCAAATGTTACAATCCAGCAATAATATGTTATATAACATAACATAAATGTGAAAAGTTAATTGTCACTGACACTTTAATCTGATAAAATCTCCTTAAGTTATCTTACAAATCAGTAGGGGGATTGGCGGATGGGGATGAAAAAGAAATGGGCGGTGTCAGCTTTGGTAGCATTTATGGTGTTTACAATGGCAGGCTGCGGCTCCGGCAATAAGGCGGATAGCGGCAGCGCCGGCGGGGAGACGATCAAGTTCGCCAGTGACGCGAGCTATGCGCCGATGGAGTACATGGACACCGATAAGATTAAGGGCTTCGACATTGATTTCATCAAGGCGGTCATGGAAGAAGCGGGTATCGGTTACACTGTTACGAACACGGGCTGGGATACCATGCTGTCCAGCGTGAAGCAGGGCACGGAATACCAGGCCGGGTTATCTTCGGTGTCCATTACGGACGAACGTAAGGAGACTTATGATTATTCCATCCCTTATTTTGAATCCACCAACATGATCATGGTTAAGGAAGGCAGCGATATCAAGAGTGCGCTTGACCTGAAGGACAAGAAGGTTGCTGTGCAGGCGGCGACTACGGCGGATGATTTGATGAGCGGGATTATGGGTGTGGACAACGGCAACCTGAAGCGTTTCGACAGCAACGCGGTGGCCCTGATGGAACTGAATAGCGGTGGAGCGGATGCGGTGGTAGCGGATATCGCCATCGTGAATGAATACATCAAGAACAATCCGGATCAGAAATTGACGGGGATCATCGACAAGGAGAACTTCGGCTCTGAATATTACGGCATCCTGTATCCGAAGGGCAGTGAATGGAAGGCCAAGCTGGATCCGGCGATCAAAAAAATTATCGAGAACGGCAAATACGCCGAAATCTACAAAAACTGGTTCGGTGAAGAGCCGGATACCCAGACCCTTTTGAACGCGGAGTAAGCGTTGGAACAACTAAGCATGCGTAATGATTGCTATTGCGCGTGCTTCTTTTTTTGAAATAGAGAGAAAGAAACAAGCTGAAGAGAAGGGAAGAGTTCTATGGATTTCAGATTTGACATCATTGCTCATTATCTGCCGGTATTGCTTAAGGGTACGGCCTTTACAATCGGTGTATCTATCGTCTCAATCATCTTCGGTTCTATCCTGGGGCTGGGAATCGGCTTTGGCAAAATGGCTCCAAAAGCGTATTTCCGCTGGCCGTTTCATTGCTACATTAACTTTTTCCGCGGAACCCCTTTGTATGTGCAGATTTTGATTGTCCACTTCGGGGTGATCCCTGCCTTTTACGGCAGCACGAATGTTCTGATGACCTCGTTTGTAGCACTCTCTCTGAACTCAGCGGCCTATTCAGCCGAGATTTTCCGGGCGGGCATCCAGTCGATTGACCCGGGGCAGCGGGAGGCTGCAGTGTCACTGGGGATGACCGGATTCCAGGCGATGCGGTTTATCATTCTGCCGCAGGCGGTTAAACGGATGGTGCCTGCGTTCGGCAATGAATTTATCGTTCTGGTAAAAGACTCCTCACTGCTCGCGCTGATTGCCGCCCCGGAGATTATGTACTGGAGCAACACGATGAAAGGCCAGTATTTGCGGATATGGGAACCCTATCTGACCGCTGCACTCATTTATTTCATTCTTACGTACTCGCTCAGCAAGCTGCTTAATTATATTGAACGGAAGGTGTAACCGCACATGGAGCCTATGATCTCAGTTAGACATCTGCATAAATCATTTGGCGCCCACAAGGTGCTGGCCGACATTAATGTGGATATTCACACCCGGGAGGTTGTGGTGGTGATCGGACCTTCGGGTTCGGGCAAATCAACCTTTCTGCGCTGCCTGAATTTCCTGGAGCAGCCGCAAGAGGGCGACATCCTTATTGAAGGAACGTCCCTGATGGCCAAAAGTACCAGAATTAACGATATCCGTACAGAGCTTGGCATGGTTTTTCAGCAGTTCAATCTGTTCCCCCACAAAAAAGTGATCGAGAACATTATGCTCGCCCCGGTCCAGGTCCGCAAATGGCCTGCGGAGCAAGCGCGCCGGAAGGCGCTGGAGCTGCTGGACAAGGTAGGATTAAGCGAAAAAGCCGAGGCGTATCCTGCCTCGCTGTCCGGCGGTCAAGCCCAGCGGGTAGCCATTGCCCGTGCGCTGGCGATGGAGCCGAAGATCATGCTGTTTGATGAGCCCACCTCTGCGCTTGATCCGGAAATGGTCGGTGAGGTGCTTGCGGTCATGAAGGATCTGGCCCGTGAAGGGATGACCATGGTAGTGGTTACCCATGAGATGGGGTTTGCCCGCGAAGTGGGGGACCGTGTGCTGTTTATGGAGCAGGGGGCGGTTGTCGAGGAGGGCCATCCGGAGCAATTGTTCAGCCATCCGTCTCATGAGCGTACCCGGGCCTTTTTGTCCAAGGTATTGTGAAATCCTGGCAAAGTAGAATCTTGGCGATTAATCGGTTATATTAGAGGGGTAAGGATTGAGAGCTGGAACTTTAAGTAAATATCTGTCGAAACGGCTGAGAGGAGGCTCGGGGATATCTTTTGTTTATCATAACTTATAGTGATAGAAGGAGAATACGATGAGCACATTTAAAAATTGGTTGAACACTACAAAAAGCGGACTGACTGAACAGGTGAAAAAGTTCAAAAATAAAGATTTCATGAACGCTGTTGTCGCGGGCTGCGCCCTGGTGGCTGCGGCTGACGGCAAGATTGAGGAAGCTGAAAAGAACAAAATGGCCGGATATATGAACCTCAGCAACGAACTGAAGGTTTTTGACATGAGGGATGTCATTGCCCAGTTCAATTTCTATGTCAGTAATTTCGAATTTTCTCCGGAGATCGGCAAGCAGGAAGCGCTGAAAGCCATCGCCAAATTCAGCAGCAAACCGGAAGTTGGACGTGTAATTGTAGGCGTATGTTCCGCAATCGGAGCGGCTGACGGTGATTTCGACGAGCAGGAAAAAGCAGTGGTGCGGAATATTTGCAGCGTGCTGGGGCTCAGCCCAAGCGAATTCAGCCTGTAAGCACCAGATTGAAATTTACCGGGAAACGGGTGAAACGTAATTGCTTCTGTGTCGTATCACTGGTATAACACCCGCAAGTTAGAATTTTAGCTGCGATTCTTTTCGAAACGGAGGTACGTGAATTTGGCTGGTATTAATTTGGTAAAAGGTCAAAAGATTGATTTAACAAAAGGAAATGCCGGGTTGTCCAATGTCATTGTAGGACTTGGCTGGGACCCTGCTGAGCCGGCACGCGGATTCTTCGGCGTCAAGAAGCAGGCCAACGTCGACTGCGATGCATCGGCGCTGCTCTTGAGCGAGAATGGCAAGCTGACCAACAAGCTGAATCTGGTCTGCTTCCACAACAAACAGAATGCAAATAGCTCTGTTGTCCATTCCGGGGATAACCTGACAGGCGAGGGAGACGGGGACGACGAGCAGATTAAGGTGAATCTGAAGGCGATTCCTGCCGATGTGCACAAGGTTCTGGTCGTAGTCAATATCTATGATGCCGTGAACCGCAAGCAGGATTTCGGAATGATTAAATCGGCGTACATCCGGATTGTGAACGCGTCGGGCAACATTGAACTGGTCAAGTTCAACCTGACGGACAATTACACAGGTTTTACTGCATTGATCTGCGGAGAGCTCTACCGGCATGGCGAAGAATGGAAATTCGCAGCCATCGGTGAGGGGGCGCACGCAGCACATATCAACCAATTGGCTGAACGCTACATCTAATTCCAATATAAGAAAAGAGGTTTCTATTCATGGCGATTAATTTATCCAAAGGGCAAAAAATCGATCTGACCAAAACCAACCCGGGTCTGTCCAAAATCACAGTGGGCCTCGGCTGGGATACCAATAAATACGACGGCGGTAAAGATTTTGACTTAGACGTCTCCGTCTTTTTGACCAATGCCAGCGGTAAAGTGGATAAAGAGAGCAACTTCATTTTCTTCAACAACAAGCAGAACGAGAACGGTTCCGTTATCCACACCGGTGACAACCGCACAGGCGAAGGCGACGGGGACGATGAGCAAATTGCAGTGGATCTGCTGAACATTCCGGCAGATGTTGAGAAAGTGGCTTTTACCATTACCATCTATGAAGCTGAGGCCAGAAGCCAGAACTTTGGACAAGTCTCCCGCTCTTATGTGCGTATTGTAAATGATGCCAACAGTGAAGAATTGATCCGGTTTGACCTGGGAGAAGATTTCTCCATTGAAACCGGCGTAGTGGTAGGCGAACTGTACCGCAACGGTGCAGAATGGAAATTCAATGCCATCGGCAGCGGCTACAAGGACGGTCTTTCCGGCTTGACCCGCGATTACGGGCTGCAATAAAACCTGCGGCTTTCGTTAAATGATACTATTCACGAAAGAAGGTTGTTACCAGTGACGATCAGTCTTTCCAAAGGACAGCGGATTGATCTTACCAAGACCAATCCGGGTCTGACGAAGGTAGTTGTGGGACTCGGCTGGGATACGAACAAATATAGCGGCGGCAAGGACTTTGACTTGGATGCTTCGGCATTTTTGCTCCATGAGGATGGCAAAGCCAAAGGTGAGGATGATTTTGTCTTTTACAATAATCCTTCCGGCGGCTCCGGATCTGTAACCCATACGGGGGATAACCGTACAGGGGAAGGCGATGGGGATGACGAGCAGATCCTTGTGGATTTCAGCAAGGTTCCCGCCAATATTCAGCGTATCGGCATTACAGTAACCATTTATGATTATGAGGCAAGAGTCCAGAACTTTGGACAAGTCTCCAATGCATTTGTGCGTGTCGTGGATGCTTCCAGCGACCGTGAGATTCTGCGGTTCGATCTGGGCGAGGACTTCTCAACAGAAACTGCCGTTGTCTTCTGTGAATTCTACCGCCATGGTGCGGATTGGAAGTTCCAGGCGGTGGGAAGCGGGTTTGCCGGCGGCCTTAGTGCCTTGTGCAGGAACTACGGACTGGACGCGCAATAGTAGCTTCAAAGGCGGGATCTTAGCGATCCTGCCCTTTTTATAAATATTAGAAGATTTATGCTTCTCAAAAGGTGGCGTAAGAATGAGCACTCAAGTGGTTAAAGGGCAGAAAGCAGACCTGACCAAAAGCAATCCGGGGCTCCATCACATGATTGCAGAGATCGCCTGGCATGCCCCTTCTTCGATGGAAATTGACGCCTCGGCGTTCCTCCTTGGTTCTGAGGGCAAGGTGCGCGGGGATGATGACCTGATCTTTTATAATAATCCGTCTACATCTTATATCCGGTATAAGGACGTGCCGGGCCAGGCTTCAGGGGGCCTCAGGCAGTTCGAGGTCGAACTGGACAAAATTCCCCCGGACATCATGAGAATCGCATTTACGCTTACACTCTATGACGGCGAAAACCGCAAGCAAAGCTTCAGTCAAATGAGTGAAGCTCATTGCCGGATTCTGAATCAGGCGACAGGCTCGGAAATCCTGCGATGTAACCTTGGAAGTCATTTCTCCGTAGAAACGGCTGTTGTGGTAGGAGAATTATATAGATACAGCGGTGAATGGAAGTTCAGCGCCATTGTGGCGGGTTTTGACGGCGGGCTGCAGGCGCTCTGCAGCAACTATGGAATTGAGGTGTCAGAGGAGCCGCCCCCGGCTCCACCTAAGACGGAGATGACAGAACGGAAGGGTACGCAAACAGAGGCACCGGTGATACCGGTGATTCAGCCGACGGCTGGATCGGCTGCGCCTCCTTCCGGGCGGCAGGAGATTTCTTCCTCTGCGCCGCTAAATCTTAATCTGAAGAAGATTGAGTTGAAGAAAAAGGGCGATTCCATTAACTTGAAGAAGTCCGCCGCCGGTCTGGGTGAAGTGCTGGTCAACCTTAACTGGAATCAGAAGCAGGGCGGCGGACTGTTCAGCCGCAAGGGCGGCGTGGATCTGGATCTTGCCTGTCTCTATGAACTCAAAAATGGCCATAAGGGCGTTGTGCAGGCGCTTGGCAATGCTTTTGGCCATTTTCAGCAGCCGCCCTTTGTGATGCTGGATGGAGATGACCGGACAGGCTCCGTAACCTCTGGAGAAAACCTGCGTATAAACGGGAGTAAGGTTGCGGAAATCCAAAGAATTTTAATTTTTGCTTTTATCTACAAAGGTGTTACCCATTGGTCCGAGGCAGATGGTGTAGTTACCATAACTCAAGGCGGCGGGCCGGATATTATTGTCCATTTGGACGAGCATAACAACCGGAAGGGCATGTGCGCCATAGCCATGGTCCAGAATGTCGGGAATGAAACGTTCAGTATTGAAAGACTCGTGCAATATTTCAGCGGGCATCGCGAAATGGACCAGGCATATGGATGGGGCCTGCAGTGGGTAGCAGGCAGTAAATAAACTATTTTACCGGAGGCAAGAATGGGATGGACTGGTTCAGCGATTTTTTTAGGAGTATAAGCGATAATTACGGGCACTTCTTCTCATGGAGTGATATTGTAGGTACCCTCTCTGACCCTGTAAGCTGGGGGATTATTGGGAGTTTGGTGCTGCTGGAAGGTCTGCTCTCCGCAGATAATGCACTCGTACTGGCAGTTATGGTCAAGCATTTACCCAAAGAACAGCAGAAAAAGGCGTTGTTCTACGGGATTCTGGGTGCATATTTATTCAGATTCCTGGCCATTGGTCTCGGGACATTCCTGATTAAGTTTACGCTCGTTAAGGTTCTGGGTGCGCTCTATCTCTTCTACATCGCCTACAAAGGATTGTTTAAAGGCGGCGAGGAAGATCACACAGAGAACAAAGGCACCTCTTTTTGGCGAACGGTGCTGATGGTTGAGTTAATGGATATTGCCTTCAGTATTGACAGCGTGGTGGCTGCCTTCGGACTTAGCGATAAGGTCTGGGTACTTTTCCTGGGCGGTATACTCGGCGTACTGATGATGCGCGGTGTGGCCCAGCTGTTCCTGAAGCTCATTGCCAGATTCCCTGAATTGGAGCAGACGGCGTTTCTGCTGATCGCTATTATTGCCGGCAAAATGATGGCTGGAGCCTTTGGCTACGAAATGTCGCATGTGGTGTTCTTCACTATTCTGATAGCAGTCTTTGTGGGAACAATCTTATACAGCTCCGGCAAGAAAAAAAGAGAGGCTAACCGTAAAGTTTAA

Protein sequences of DBSCAN-SWA_4

>NZ_CP048429|2354129:2363369|2361297_2362602_+|WP_062524996.1|DBSCAN-SWA
MSTQVVKGQKADLTKSNPGLHHMIAEIAWHAPSSMEIDASAFLLGSEGKVRGDDDLIFYNNPSTSYIRYKDVPGQASGGLRQFEVELDKIPPDIMRIAFTLTLYDGENRKQSFSQMSEAHCRILNQATGSEILRCNLGSHFSVETAVVVGELYRYSGEWKFSAIVAGFDGGLQALCSNYGIEVSEEPPPAPPKTEMTERKGTQTEAPVIPVIQPTAGSAAPPSGRQEISSSAPLNLNLKKIELKKKGDSINLKKSAAGLGEVLVNLNWNQKQGGGLFSRKGGVDLDLACLYELKNGHKGVVQALGNAFGHFQQPPFVMLDGDDRTGSVTSGENLRINGSKVAEIQRILIFAFIYKGVTHWSEADGVVTITQGGGPDIIVHLDEHNNRKGMCAIAMVQNVGNETFSIERLVQYFSGHREMDQAYGWGLQWVAGSK
>NZ_CP048429|2354129:2363369|2356352_2357168_+|WP_082722730.1|DBSCAN-SWA
MGMKKKWAVSALVAFMVFTMAGCGSGNKADSGSAGGETIKFASDASYAPMEYMDTDKIKGFDIDFIKAVMEEAGIGYTVTNTGWDTMLSSVKQGTEYQAGLSSVSITDERKETYDYSIPYFESTNMIMVKEGSDIKSALDLKDKKVAVQAATTADDLMSGIMGVDNGNLKRFDSNAVALMELNSGGADAVVADIAIVNEYIKNNPDQKLTGIIDKENFGSEYYGILYPKGSEWKAKLDPAIKKIIENGKYAEIYKNWFGEEPDTQTLLNAE
>NZ_CP048429|2354129:2363369|2359380_2359977_+|WP_062524993.1|DBSCAN-SWA
MAGINLVKGQKIDLTKGNAGLSNVIVGLGWDPAEPARGFFGVKKQANVDCDASALLLSENGKLTNKLNLVCFHNKQNANSSVVHSGDNLTGEGDGDDEQIKVNLKAIPADVHKVLVVVNIYDAVNRKQDFGMIKSAYIRIVNASGNIELVKFNLTDNYTGFTALICGELYRHGEEWKFAAIGEGAHAAHINQLAERYI
>NZ_CP048429|2354129:2363369|2354129_2355188_+|WP_062524984.1|DBSCAN-SWA
MYPKDLNYTMPPEWGEHERTFISWPVQASMVFPDNYEAVSAGYAEIIRAIAEFEPVTVVVNPEELEQIEKLALGDNVTLLPIRHNDAWLRDNGPTFVKGADGALAGVNWKFNAWGGKYSPWDLDDEVAPQILEQVQVTRYDAPLVMEGGSIHTDGEGTLITTEECLLNKNRNPELDREEIEEYVRKYTGTETIIWLKRGLSGDETDGHVDNIACFAAPGKVIIQVCDDPQDENYEITRENLRILENAVDAKGRKLEIVTIQQPPRTDYDGSRLTLSYLNFYFVNGGIILPVFGGTAAETDALAEEKLAALFPDRRIRTVDGMAVIGEGGNVHCTTQQMPAGRSSIYARRTEL
>NZ_CP048429|2354129:2363369|2355184_2356060_+|WP_062524986.1|DBSCAN-SWA
MRNVKVAATQMSCSGDIDENIRKAETLVREAAAQGAQIILLQELFETPYFCQKEKSDYYAYATELEHNKAVNHFKAIAKELQVVLPISFYEKKNYARYNSLAVIDADGTVLGKYRKSHIPDGPGYEEKFYFNPGDTGFKVWNTRYAKIGVGVCWDQWYPEAARVMSLMGAEILFYPTAIGSEPQDGSIDSKDHWQTCMLGHAAANLIPVVASNRIGEETDEESSINFYGSSFIAGPQGNKIVEAGRDEQTVLVSEFDLDALEVGRIEWGIFRDRRPELYRMIASYDGDLTF
>NZ_CP048429|2354129:2363369|2358810_2359257_+|WP_062524991.1|DBSCAN-SWA
MSTFKNWLNTTKSGLTEQVKKFKNKDFMNAVVAGCALVAAADGKIEEAEKNKMAGYMNLSNELKVFDMRDVIAQFNFYVSNFEFSPEIGKQEALKAIAKFSSKPEVGRVIVGVCSAIGAADGDFDEQEKAVVRNICSVLGLSPSEFSL
>NZ_CP048429|2354129:2363369|2362628_2363369_+|WP_062524998.1|DBSCAN-SWA
MDWFSDFFRSISDNYGHFFSWSDIVGTLSDPVSWGIIGSLVLLEGLLSADNALVLAVMVKHLPKEQQKKALFYGILGAYLFRFLAIGLGTFLIKFTLVKVLGALYLFYIAYKGLFKGGEEDHTENKGTSFWRTVLMVELMDIAFSIDSVVAAFGLSDKVWVLFLGGILGVLMMRGVAQLFLKLIARFPELEQTAFLLIAIIAGKMMAGAFGYEMSHVVFFTILIAVFVGTILYSSGKKKREANRKV
>NZ_CP048429|2354129:2363369|2357267_2357915_+|WP_062524988.1|DBSCAN-SWA
MDFRFDIIAHYLPVLLKGTAFTIGVSIVSIIFGSILGLGIGFGKMAPKAYFRWPFHCYINFFRGTPLYVQILIVHFGVIPAFYGSTNVLMTSFVALSLNSAAYSAEIFRAGIQSIDPGQREAAVSLGMTGFQAMRFIILPQAVKRMVPAFGNEFIVLVKDSSLLALIAAPEIMYWSNTMKGQYLRIWEPYLTAALIYFILTYSLSKLLNYIERKV
>NZ_CP048429|2354129:2363369|2360006_2360582_+|WP_062524995.1|DBSCAN-SWA
MAINLSKGQKIDLTKTNPGLSKITVGLGWDTNKYDGGKDFDLDVSVFLTNASGKVDKESNFIFFNNKQNENGSVIHTGDNRTGEGDGDDEQIAVDLLNIPADVEKVAFTITIYEAEARSQNFGQVSRSYVRIVNDANSEELIRFDLGEDFSIETGVVVGELYRNGAEWKFNAIGSGYKDGLSGLTRDYGLQ
>NZ_CP048429|2354129:2363369|2360633_2361215_+|WP_020430847.1|DBSCAN-SWA
MTISLSKGQRIDLTKTNPGLTKVVVGLGWDTNKYSGGKDFDLDASAFLLHEDGKAKGEDDFVFYNNPSGGSGSVTHTGDNRTGEGDGDDEQILVDFSKVPANIQRIGITVTIYDYEARVQNFGQVSNAFVRVVDASSDREILRFDLGEDFSTETAVVFCEFYRHGADWKFQAVGSGFAGGLSALCRNYGLDAQ
>NZ_CP048429|2354129:2363369|2357930_2358653_+|WP_062525286.1|DBSCAN-SWA
MISVRHLHKSFGAHKVLADINVDIHTREVVVVIGPSGSGKSTFLRCLNFLEQPQEGDILIEGTSLMAKSTRINDIRTELGMVFQQFNLFPHKKVIENIMLAPVQVRKWPAEQARRKALELLDKVGLSEKAEAYPASLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLAVMKDLAREGMTMVVVTHEMGFAREVGDRVLFMEQGAVVEEGHPEQLFSHPSHERTRAFLSKVL

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062524984.1|2354129_2355188_+	agmatine deiminase family protein	M1I8B1	Paramecium_bursaria_Chlorella_virus	4.0e-66	38.9
WP_062524986.1|2355184_2356060_+	N-carbamoylputrescine amidase	M1GUG4	Paramecium_bursaria_Chlorella_virus	2.5e-74	48.1
WP_082722730.1|2356352_2357168_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_062524988.1|2357267_2357915_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_062525286.1|2357930_2358653_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.4e-24	31.8
WP_062524991.1|2358810_2359257_+	tellurite resistance TerB family protein	A0A1Y0T181	Sinorhizobium_phage	2.3e-07	30.0
WP_062524993.1|2359380_2359977_+	TerD family protein	K4JRX3	Caulobacter_phage	2.6e-22	31.7
WP_062524995.1|2360006_2360582_+	TerD family protein	K4JRX3	Caulobacter_phage	1.4e-25	34.9
WP_020430847.1|2360633_2361215_+	TerD family protein	K4JRX3	Caulobacter_phage	5.9e-27	37.3
WP_062524996.1|2361297_2362602_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_062524998.1|2362628_2363369_+	TerC family protein	S5MAL1	Bacillus_phage	1.7e-58	52.7

Sequences of DBSCAN-SWA_5

Nucleotide sequences of DBSCAN-SWA_5

>NZ_CP048429|2718818:2730312|DBSCAN-SWA
TATGATCGAACGTTACAGCAGACCTGAGATGCGGGCCATTTGGACCGAAGAGAATAAATTCAACGCGTGGCTGGAAGTGGAGATTTGCGCCTGCGAGGCTTGGGCCGAGCTGGGAGTCATCCCGCATGAGGATGCTGCGAAGCTGCGGAAGGATGCCAAATTTGACATCGGCCGCATTAATGAAATTGAGCTTGAAACGCGTCATGATGTTATTGCTTTTACCCGTGCGGTATCCGAGAGCCTGGGCGCGGAGCGCAAATGGGTGCACTACGGATTAACCTCGACGGACGTTGTGGATACGGCGCTCGGCTATCTGCTGCGCCAGGCCAACGAGATTCTGGAGAAGGACATTATCAACTTCATCGAAATTCTCAAAGACAAGGCGCTGGCCTACAAGGACACTCCGATGATGGGACGCACCCATGGCGTGCACGCCGAGCCAACGACATTTGGACTCAAAATGGCGCTCTGGTACGAGGAAATGAAGCGTAACCTGGAGCGTTTCCGCCATGCTGCAAACGGCGTGCAGTTCGGCAAAATCTCCGGGGCGGTCGGCACCTACGCCAATATCGACCCGTTCGTTGAAGAATTCGTCTGCCGCAAGCTGGGCACCAGCCCGGCGCCGATCTCCACACAGACGCTGCAGCGTGACCGCCACGCGGAATATATGGCTGCGCTGGCCCTTGTCGCTACTTCCCTGGACAAGTTCGCTACCGAAATCCGTGCCCTGCAAAAGAGCGAAATCCGCGAGGTGGAAGAAGCTTTTGCCAAAGGCCAGAAGGGCTCGTCGGCGATGCCGCACAAACGCAATCCGATCGGCTGCGAGAACATCTCCGGCTTGTCGCGCGTGATTCGCGGCCACATGATGACGGCCTACGAGAACGTGCCGCTGTGGCATGAGCGCGACATCTCGCATTCCTCCGTGGAGCGGATTATCCTGCCGGATGCGACCATGCTGCTGAACTATATGCTGAACCGCTTCGGCAACATCGTGAAGAACCTGACTGTGTTCCCGGAGAATATGAAACGCAACATGAACCGTACCTTCGGAGTGCCGTTCTCCGGCCGCATCCTGACCAAGCTGATTGACAAAGGCTTCAGCCGTGAGCAGGCCTACGATACCGTGCAGCCGCGTGCGATGCAGGCCTGGGAGGAACAAACCCAGTTCCGCGATATCGTAGAGGCTACCCCGGAGATCACCGCTGTGCTTAGCCCGGAAGAGATTGAGGATGCTTTTAATCCTACGTGGCACCTTAAGCATGTGGACACCATCTTCCGCAAGCTGGAGCTAATTTAATAAAAGGTAACTTAGTGGTGAACTAAGGAGCTGGAGAATAATACGAGCAGGAGCGAGGGGGAGTTTTTTATTCTGAGAAGCGGAGCAACAAGGGGATTGGAATAGGTATTTAGGTTAAAGACGAGCGGAGAGAAATTTTGGAACTGGAGAAGCGTCAGCGTTCGCCTTTATGTTTGGATTTCTACCGCTGCCAGCGGTTCAAATCAGGAAATTCAAACATAACAGCGATCGGAAGTCCAAACATTTCTTGCAGTGACCCTATTAACCCCAAGGAGTATTTCAATTTTTTGTCGATTCGAATCGAAGAAAAGAAGACGTTCAGCGCTTTTAGCCCAAGTATATACGCAAGATCATTTGTTCAAGGGAGGAAAGGTCATGACATACCCTGCCGTATCCACGGCTGTGGATCTCGTAAATGCACCGCTGCTCTACAAAGGAAAGGTTCGCGAGTTGTACGATCTGGGGGAAGAAGTGCTGATCGTTGTCACGGACCGGATATCCGCATTCGATTACGTGCTCGACCCGGCAGTGCCGGAGAAAGGCAATGTGCTTAACCGGCTCAGCGCTTTCTGGTTTGGCAAAACCAGCGAACTGATGGAGAACCACGTCGTGCATATTGATGTGGACCAGCTGGGGGGGATCGTGAAGGACCGCGAGGCGCTCAGAAACCGCATCATGGTCGTCCGCAAAGCGGAGCGTATTGACATTGAATGCGTCGTGCGCGGCTGCATTACCGGCGGCGGCTGGCGGCAGTATCAGGAGACGGGCAAGGTCAACGGCATCGGGCTTCCTGCAGGCCTGCGCAAAAACGCGCAGCTGTCCCAGCCGATTTTTACCCCTGCGGCCAAAAATGATGTCGGCCACGACGAGGATATCCCTTTTGAGAAGATGCAGGAGCTGATTGGGGCGGAGCTGGCGCTGGAGCTTAAGGAGAAGAGCCTGAAGCTGTTCTCTTTTGCCAGAGAGTACTGTGAAGAGCGTGGCATTATCCTCGCGGATTGCAAATTCGAGTTCGGGCTGCTGGACGGCAAGGTGATCCTGATCGACGAGATTTTTACCCCGGATGCTTCACGCTTCTGGGCCAAGGACAAATATGCGCTGGATATTGAGATCGACAGCATGGACAAGGAGCCGGTCCGGACCTACCTTTCCGCATCCTCCTGGGACAAGAACAGCACCCCGGACCCGCTCCCGGCAGAAGTCGTGGAAGAAACCACCCGCCGTTATTTGGATATATATCATCGCCTTACTGGCAAGTCGTTATAGATATTAGTATTTTCCCGGCCAGTGTTAATTGCACTCTATGCAGTTATTTTGCCGGAGATATTGAGATTATAGCTGTATGTTATGCAATTAAAGCTGTATGTCAAGCAGTTGAGTTAGTTATAACGTTCAGGTACCGATCATTAATCACGCCAAGCCAAGCTCATTAAATTTTAGGAGGAACTACAAGCGTATGTTAAAAGCGACAGTGTATGTCACCATCAAGAAAAGTGTGCTCGATCCCCAGGGTGTAGCCGTGCAAGGGGCGCTGCATTCCGTTGGCTTTCAGGAAGTGGAGAGCTTGCGCATTGGCAAGTATATGGAATTGACCCTGGATACCGATAACCGCGCTGAAGCGGAAGGACGCCTGAAGGAAATGTGTGAAAAGCTGCTGGCCAATACGGTGATCGAGGATTACCGATACGAATTGGAGGACTAAAAGTCATGAAATTTGCTGTACTTGTCTTTCCGGGTTCCAATTGCGATATTGACTGCTACAAGGCGGTAGAAGACAGCCTCAGCGAACCAGTAGAATATGTATGGCATACAGCGACTGATCTGTCGGCTTATGACTGTATTCTCGTGCCGGGAGGCTTCTCTTATGGTGATTATCTGCGCTGCGGCGCGATTTCCCGGTTTGCTCCGGTGATGGGTGAAGTGGCCAAAGCTGCAGAGCAGGGCAAATTCGTGCTCGGCATCTGCAACGGCTTCCAGATTCTGACCGAAGCCGGCCTGCTGCCAGGTGCACTGCGCCGCAATATGTCGATGAAGTTCCGCTGTCATGATACGGTGCTTAAGGTGGTTAATAACACTACGCCGTTTACAGTTGATTATGCGAAGGATGAGGAGATTGTCATTCCAATCGCCCATGGTGAAGGCAACTATTACTGTGATGAAGAAACTATGGCCGGGCTAAAAGCTAATAATCAGATCGTGTTCACATATAGTGATAATCCTAATGGATCCGTGGAGCATATCGCCGGGATTTGCAATGTGCAGGGCAACGTGGTTGGCATGATGCCTCACCCGGAACGCGCGGCGAACAGCCTGCTTGGTTCGGAAGACGGCAAACGGATGTTCACATCCATTCTCAAGACATGGAGGGATCGTTATGACGCAGCAAGTATCCGCTAAGGAGCCGACCGCTGAGCAAATCGCGGAGCAGAAAATCTACAATCAGTTCGGAGTGTCGGACAGCGAATATGAGCTCATCACTTCTTTCATGGGCCGCAAGCCAAACTACACGGAAATCGGCGTGTTCAGTGTAATGTGGTCGGAGCACTGTGCCTATAAGAACTCGAAGCCGCTGCTGGGCCGTTTTCCTACAAGCGGGCCGCGCGTGCTGATGGGACCGGGCGAAGGCGCCGGGATCGTTGATATTGGAGATAACCAGGCAGTTGTATTCAAAATCGAAAGCCATAACCATCCTTCGGCAGTTGAGCCTTACCAGGGCGCGGCGACCGGGGTGGGCGGGATTATCCGCGATATTTTCTCCATGGGCGCAAGACCGGTGGCGCTGATGAACTCCCTGCGATTCGGAAAGCTCGAAAGCGACCGGGTTAAGTATTTGTTCGAGCATGTCGTATCCGGTATTGCCGGCTATGGCAACTGTATCGGGATTCCGACTGTGGGCGGCGAAATTATGTTCGACAACAGCTATGACGGCAATCCGCTGGTCAATGCCATGTGTGTCGGACTCATTGATCATGACAAAATCCAGCGCGGTGTCGCCAAAGGTGTAGGCAACCCGGTGTTCTACGTAGGTCCTCCTACCGGACGCGACGGGATTCACGGCGCAACCTTTGCCTCCGTTGAGCTGAGTGAGGAATCGGAAGCCAAGAAGACAGCGGTGCAGGTCGGCGATCCGTTTATGGAAAAGCTGGTGATGGAATCCTGCCTGGAGCTGATCGACAGCGGCATCGTGCTGGGCATTCAGGATATGGGCGCAGCCGGATTGACCTGCTCCAGTGCCGAAATGGCAAGCAAAGCGGGCAACGGCCTGGAGCTGTATCTGGATCAGGTGCCGCAGCGTGAAGACGGCATGACGCCTTACGAGATGATGTTGTCCGAGTCGCAGGAGCGGATGCTGTTTGTGGTTGAACCCAAGGATGAAGCACAGGCACAGGAGATTTTTGACCGCTGGGGGGTTATCTGCCGTAAAGTGGGCAAGGTAACCGATGACGGCCGCCTGAAGCTGTTCCATCATGGCGAGGTTGTCGGTGATATGCCGGTAACGGCGCTGGTGGATGAGTGCCCGATTTATAAAAAACCTTCAGCAGTGCCTGCCTACTATGAAGAGAACGCATCGGTTGATACGCTTCGTTACGAAGAAGTAAAGGATCTGGGCGGTGCCTTGCATACCGTATTGGCATCACCGACAGTAGCAAGCAAAGCATGGGTCTACAACCAGTACGATTACATGGTGCGGACAAGCACTGCGGTCCGTCCGGGTTCCGATGCGGCGGTCGTGACGATTCATGGCACACGCAAGGGCCTCGCAATGACCACCGACTGTAATGGGCGTTACGTTTATTTGGACCCGGAAGTTGGCGGGCGGATTGCAGTCAGTGAAGCGGCGCGCAACATCGTATGCTCAGGGGCCAAGCCGCTGGCGATTACGGATAACCTGAATTTCGGCAGTCCGGAGAAGCCGGAAATTTTCTGGCAGATGGAACGTGCTGTAGACGGTATGGCTGAAGCCTGCCGCGTGCTGGACACACCGGTTATTGGCGGCAATGTCAGCTTGTACAACGAAAATGCCTCCGGAGCGATCTATCCGACACCGGTTGTCGGCATGGTGGGTCTAGTGGAAGATACCGATCATATTACCACTCAGGCCTTCAAGCAGGAGGGTGATGCTATTCTGCTGCTGGGCGTTACCAAAGCCGAGCTTGGCGGCAGCGAATTCCAATATGCCGTACACGGCTTGACGGAAGGACGTCCGCCGGAGCTGGATCTGGCAACCGAACAGAAGCTGCTGGATGCCGTTCTTGCGGCGATCCGCAGCGGACTTGTCCGCTCGGCGCATGACCTCTCCGAAGGAGGCTTGGCCGCAGCGCTGGCTGAGAGCTGTATCAGCGGCTCTATCGGTGCGAATGTGGAGTGGTCTGCTGGCGGACTGCGCAGAGATGTGGCGTTATTCAGCGAGAGCCAATCCCGCATTGTACTGACAGCTGCACCTGGCCGTGCGGAAGAGCTGAGAGCAGCAGTAGCTGCCTATGGCGTGCCGGCTGAAATTATCGGAACTGTTGGCGGCGGCAGACTGCGTGTTTCCTTGGACGGCGAAGCCGTGCTGGACGAGACTGTAGCCGCACTAAAAACCACTTGGGAGGATGCTATTCCATGTCTTATGAAATAAAGACCGGGAACAGGCAGGAGAACCCCATCCTGTGGACCGGCGACTTTTACAACGAAGGAACGGGCTCGGGAGATATTTTTGATACGCTAAAAGAAGAATGCGGCGTCTTCGGGGTCTTCGGACACCCGGAGGCTGCCTCCATGTCATATTACGGCCTGCATGCCCTGCAGCACCGGGGGGAAGAGAGTGCGGGCATCTGCGTCGCAGACGGACGAGACTTCCACTATCACCGCGGCATGGGACTGGTCAAGGAAGTGTTCGATAAGGACAAAATCGCCTCGCTGATCGGCAACATGTCCATTGGCCATGTGCGCTATTCCACCAGCGGCGACAGCCGTCTGACCAACGCGCAGCCGCTGGTCTTCAAATACCGTGACGGGGATTTGGCGATTGCCACCAACGGGAATATTGTAAATGAGCCGCTGATCCGCAAGCAGTTGGAGCAGAGCGGGTCCATCTTCCAGACCACAAGCGATACAGAGGTGCTGGCGCATCTGATTGCGCGTTCGCAGAAGGAGTTTGTCGAAGCGACTAAAGATGCCCTCCGGCAGCTGGTCGGCGGTTTCGCTTTCCTGCTGATGACCAATGATAAGCTGATCGTAGCTTCCGACACGCATGGCCTCCGTCCGCTTGTGATGGGGCGTGTAGGTGAAGCCTATATTTTTGCTTCGGAATCCTGCGCGCTGGAAGTCATCGGTGCTCAGTTCGTCCGCGACATTGAGCCGGGCGAGTTGTTGGTGCTTGACCGGAACGGCTTCCTGGAAGACCGTTTTGCCGAGCCGCAGCGCAAGGCGCTGTGTGCGATGGAATACATTTATTTTGCCCGGCCGGACAGCGATCTGAACGGCTCCAACCTTCACTCCGCCCGCAAGCGGATGGGCAGCCGGATGGCGCTGGAAGCCTTCGTTGACGCTGACATCGTAACCGGCGTGCCGGATTCCAGCATCTCGGCGGCCATCGGCTATGCAGAGCAGACCGGCATTCCCTATGAGCTTGGCCTCATCAAGAACAAATACACCGGCCGCACCTTCATCCAGCCGAGCCAGGAACTGCGCGAGCAGGGCGTGAAGATGAAGCTGAGCGCGGTGCGCCGCGTCGTTGAAGGCCAGCGCGTGGTCATGATCGACGACTCCATCGTGCGCGGCACCACTTCACGCCGGATCGTCAACCTGTTGCGCGAAGCCGGAGCGACCGAGGTCCATGTGCGGATTACCTCGCCGCCTTTCAAGAATCCTTGCTTCTACGGCATCGATACTCCGGACCGCCGCGAGCTGATCGCCTCTTACAAGACGATTGAAGAAATGTGCAAGGAGATCAATGCCGATTCGCTGGCGTTCCTTACGCCGGAAGGCCTGATCCAGTCCATCGGCGGTTACAACAGCGGAGATTATAAGGGCGGCCTGTGTCTGTCCTGCTTCGATAATGATTACCCGACGCAGGTGGACTTTGGCGGGGAAGAGAAGGACGGGTGCAGTTGCTAGTTGGGACATCCCCCTAAGTCGCGGGCCCATCCCCCTAAGTCCCCCTTGCAAAGGGGGATTCCAGAGGGCGCTGCCCTCCGGCCACCCGAAAGCTCGGCGGTAGGAGTTTGCTCTAAACTTTCTAAGAGGGCGTGGGTGCGGGGACCGCTTTGTCCTGCGGACACGCTTTACGGCGCACCACGCCCTGGCGGCCTGATGCCCCGCCGGGCCTGAACGCTCAAGAATCAGCCTGTTTGCTCCGCAAAATCGGAGGTTCTCTCGCTACATGGCGCGCGCGGCTTCGCCCCGTGCGCGAAGAGCAAGGCTCAAGCCCCCGTCCTGTTTGCTGCGCAAAAGCGGGGGTGCTCTCGCTAAAGGAGGCGCTTGGCTTCGCCAAAAGCGCCGACTAATTGCCCTGTGCAAGGCGCGTTACTTCGGCTTGCGGCGGGGTTTGAACCCGGTGGTTGGAGTTATGGAGGGGAAGTTTGGAACTGGAGGAGCGATAGCGTTCGCCTTTATGTTTGGATTTCTACCGCGTACAGCGGTTCAAATCAAGGAAATCCAAACATAACAGCGACCGGAAGTCCAAACATTCCTCGTAATAACGACTACAACCACCAAGCTTCAAATCCCTGCCGCCCCGAACACGCGCTCTAAACTAATTCAAATGAGGTGTCCAATAGTGTCGGAAGCTTATAAAAACGCCGGAGTGGATATTGCGGCTGGCAATGAAGCGGTTGAACGCATGAAGAAGCATGTGAAGCGTACATTCCGTCCGGAAGTGATGACAGAGCTCGGCGGGTTCGGTGCACTCTTCGGACTCAACAAAGACAAGTATGAAGAGCCGGTGCTCGTCTCGGGAACCGATGGTGTGGGCACTAAGCTCAAAATCGCTTTCGCGGCAGACCGCCACGACACGATTGGCATCGATGCGGTAGCCATGTGTGTGAACGATATTGTAGTGCAGGGTGCAGAGCCTCTGTTCTTTCTCGATTATCTGGCTTGCGACAAGGTTGTGCCCGAAAAGATTGAAGCAATTGTTGCCGGGATTGCCGAAGGCTGTCATCAGGCGGGCTGCGCACTAATCGGCGGCGAGACGGCTGAGATGCCGGGCATGTATTCGGCGGGTGAATATGATATCGCCGGATTCACGGTGGGTGTAGCCGACAAGGCCAAGCTGGTGACAGGTGCGGATATCGCGCCTGGAGATACGGTCATTGGCCTGGCATCCAGCGGTGTGCACAGCAACGGGTTTTCGCTGGTGCGCAAGCTTTTGCTGGAGGAAGACGGCTATGGGCTGAACGATGTGGTGCCAGAGCTGGGCGCTCCGCTGGCAGATGTACTGCTGGCGCCTACTAAGATCTATGTGAAGCCGCTGCTGGGGCTGCTGGAGCAGCTGCCGGTCAAGGGCATGGCCCATATTACCGGAGGCGGATTCATCGAGAACATTCCGCGTGTGCTGCCGGAAGGTGTGAATGTGGACATCAACTACGGCTCCTGGCCGGTTTTGCCGATCTTTGATTTGCTGCAGAAGAAAGGCGGCGTCAGCAACCGTGATATGTTCACCACCTTTAATATGGGCGTGGGACTGGTGCTGGTTGTGGCTGAGGCAGATGGGGAACGTGCGCTGGAACTGCTGAAAGCGGCCGGGGAAGAAGCCTATCGGATTGGCAGAGTAACGGAAGGGGAACGCATCGTTACCTTTACGGGAGCTGAAGTGTGATGCAGTGGAGCCGGATCGCTGTTTTTGCCTCCGGGCAGGGCAGCAATTTTGCCGCACTGGCAGAGGCGGAGCGGGCAGGACGGCTTGGCGGAGGGCGTATAGAGCTGCTGGTATCTGACAGGCCGGAAGCACCGGTGGCGAAGCGGGCGGAGGAGGCGGGCATTCCCGCCCTGCTGCTGCGGCCGAAGGACTTCGCAAGCCGCGAGCTCTATGAGGCCGAGATTGTAGCCGAGCTGCAGCGGCGGAATATCGGCCTGATCGTTCTGGCCGGATATATGCGGCTGATTACCCCGGTGCTGCTGGCGCCTTACGCCGGCCGGATCGTGAACATCCATCCCTCGCTTTTACCCGCCTTCGCCGGAAAGGACGCCATTGGCCAAGCGCTGGATTACGGTGTGAAGCTGACGGGAGTAACGGTGCATTTTGTCGATGGCGGCATGGACACCGGCCCTGTCATTGCCCAGCGCAGTGTGGCCGTGGAGCCTGGCGACTCTGCGGAATCGCTGGCAGAGCGCATTCATCAAGTTGAATATGAGCTGTACCCTGAGATTGTGCGTGCTTTGGCTGAAGGAAGAGTAATGTTGGATGAAAGAAAGACAGTTATTCGGGAATAGCCGCCCGGTTCTGATATTTCTCGGGAAATATTGCACAAACGGTGAGCGGCTGCCCGGAAGAAGGCGGATTTTGTTCTTTATTGCACAGTTGATGTTGAAATAAGCAGAGATTGGTGCACCGTCTCTCACAGCTGCATTGAGGTTGATAACGTTAATTTTACACATAGCAGAGTTCCCTAGTACGATTTACCCCCAACTAAATTAAGGATCATCCGGAGGAGGACTATTCAAAGTGAGTATCAAAAGAGCGCTGGTCAGCGTATCGGACAAACAAGGCATCGTGGATTTTTGCCGCGGGTTGTCTGCTTTGGGCGTAGAAATCATTTCCACAGGCGGCACTAGCACCCTTTTGGCTAAAGAAGGCGTACCGGTTATCGGCATTTCGGATGTGACTGGGTTCCCGGAAATTATGGACGGGCGCGTGAAGACGCTGCATCCGGCCGTACACAGCGGCCTTCTGGCGGTCCGTGACAACGAGGAACATACACGGCAGATGCAGGAGCTGGGTCTGGACTACATTGATCTGGTTGTGGTGAATCTCTATCCGTTCGCGGAAACGATTGCCAAACCGGATGTATCGTATGAGGAAGCGATCGAGAACATCGATATCGGCGGACCTACGATGCTGCGTTCGGCGGCGAAGAACCATGCTTTTGTCAGTGTGGTTGTGGATGCAGCCGATTATGCCACGGTGCTTGAGGAAGTGCGTGCAGGCGGAGATACCACTCTGGAAACCCGCAAACGTCTTGCGGCAAAAGTGTTCCGCCACACGGCGGCTTACGATGCCCTGATTTCCGATTATCTGGCGAATGTGACCGGTGAACCGCTGCCGGAGCGCTATACGGTAACTTACGAGAAAATTCAGGATCTGCGATATGGGGAGAATCCGCACCAGAAGGCAGCGTTCTACCGCAAACCTCTGGCCGCTCAAGACTCGCTGACCTCTGCCGAGCAGCTGCACGGCAAGGAGCTGTCCTACAACAACATCAATGACGCCAACGCGGCGCTGCAGATTGTGAAGGAGTTCGAAGAGCCGGCTGTGGTAGCCGTTAAGCACATGAATCCTTGCGGCGTAGGCGTAGGGGCGAGCGTATATGAAGCGTATCAAAAAGCCTATAATGCCGATCCAACCTCCATTTTTGGCGGAATCGTAGCAGCCAACCGGATTATTGATGCCGATACGGCCAATATGCTGAAGGATATTTTCCTGGAAATCGTGCTGGCGCCGGGCTTCACAGAGGAAGCGCTGGAAATTCTCACGAAGAAAAAGAATATCCGCCTGCTCAAACTGGGCAATCTAAGCACGGCTGCAGCGCGGAAATCCAGCTTTGTGGTGACTTCCATTGAAGGCGGCATGGTCGTTCAGGAGAGCGATGTGCATTCCGTCAATCCGGAAGAACTGCAGGTTGTGACGAACCGCAAGCCTACAGAAGAAGAATTGAAGCAGCTGCTGTTCGGCTGGAAGGTTGTTAAGCATGTGAAGTCTAACGCCATCGTGCTGGCGGCGGATGATATGACAGTCGGCGTAGGTGCGGGCCAGATGAACCGTGTCGGTGCGGCGAAGATCGCCATTGAGCAGGCCGGGGAGAAAGCCAAGGGTTCTGTGCTGGCCTCCGATGCTTTTTTCCCAATGGGCGATACATTGGAAATGGCAGCAAAAGCCGGCATCACCGCGGTTATTCAGCCGGGCGGCTCCATCAAGGACGAAGAGTCCATCAAAGTTGCTAATGAATATGGTATTGCCATGGTCTTCACCGGCGTTCGCCATTTCAAACACTAG

Protein sequences of DBSCAN-SWA_5

>NZ_CP048429|2718818:2730312|2721570_2721816_+|WP_019913657.1|DBSCAN-SWA
MLKATVYVTIKKSVLDPQGVAVQGALHSVGFQEVESLRIGKYMELTLDTDNRAEAEGRLKEMCEKLLANTVIEDYRYELED
>NZ_CP048429|2718818:2730312|2720489_2721380_+|WP_062524158.1|DBSCAN-SWA
MTYPAVSTAVDLVNAPLLYKGKVRELYDLGEEVLIVVTDRISAFDYVLDPAVPEKGNVLNRLSAFWFGKTSELMENHVVHIDVDQLGGIVKDREALRNRIMVVRKAERIDIECVVRGCITGGGWRQYQETGKVNGIGLPAGLRKNAQLSQPIFTPAAKNDVGHDEDIPFEKMQELIGAELALELKEKSLKLFSFAREYCEERGIILADCKFEFGLLDGKVILIDEIFTPDASRFWAKDKYALDIEIDSMDKEPVRTYLSASSWDKNSTPDPLPAEVVEETTRRYLDIYHRLTGKSL
>NZ_CP048429|2718818:2730312|2728764_2730312_+|WP_062524165.1|DBSCAN-SWA
MSIKRALVSVSDKQGIVDFCRGLSALGVEIISTGGTSTLLAKEGVPVIGISDVTGFPEIMDGRVKTLHPAVHSGLLAVRDNEEHTRQMQELGLDYIDLVVVNLYPFAETIAKPDVSYEEAIENIDIGGPTMLRSAAKNHAFVSVVVDAADYATVLEEVRAGGDTTLETRKRLAAKVFRHTAAYDALISDYLANVTGEPLPERYTVTYEKIQDLRYGENPHQKAAFYRKPLAAQDSLTSAEQLHGKELSYNNINDANAALQIVKEFEEPAVVAVKHMNPCGVGVGASVYEAYQKAYNADPTSIFGGIVAANRIIDADTANMLKDIFLEIVLAPGFTEEALEILTKKKNIRLLKLGNLSTAAARKSSFVVTSIEGGMVVQESDVHSVNPEELQVVTNRKPTEEELKQLLFGWKVVKHVKSNAIVLAADDMTVGVGAGQMNRVGAAKIAIEQAGEKAKGSVLASDAFFPMGDTLEMAAKAGITAVIQPGGSIKDEESIKVANEYGIAMVFTGVRHFKH
>NZ_CP048429|2718818:2730312|2726877_2727918_+|WP_062524163.1|DBSCAN-SWA
MSEAYKNAGVDIAAGNEAVERMKKHVKRTFRPEVMTELGGFGALFGLNKDKYEEPVLVSGTDGVGTKLKIAFAADRHDTIGIDAVAMCVNDIVVQGAEPLFFLDYLACDKVVPEKIEAIVAGIAEGCHQAGCALIGGETAEMPGMYSAGEYDIAGFTVGVADKAKLVTGADIAPGDTVIGLASSGVHSNGFSLVRKLLLEEDGYGLNDVVPELGAPLADVLLAPTKIYVKPLLGLLEQLPVKGMAHITGGGFIENIPRVLPEGVNVDINYGSWPVLPIFDLLQKKGGVSNRDMFTTFNMGVGLVLVVAEADGERALELLKAAGEEAYRIGRVTEGERIVTFTGAEV
>NZ_CP048429|2718818:2730312|2722488_2724735_+|WP_062524160.1|DBSCAN-SWA
MTQQVSAKEPTAEQIAEQKIYNQFGVSDSEYELITSFMGRKPNYTEIGVFSVMWSEHCAYKNSKPLLGRFPTSGPRVLMGPGEGAGIVDIGDNQAVVFKIESHNHPSAVEPYQGAATGVGGIIRDIFSMGARPVALMNSLRFGKLESDRVKYLFEHVVSGIAGYGNCIGIPTVGGEIMFDNSYDGNPLVNAMCVGLIDHDKIQRGVAKGVGNPVFYVGPPTGRDGIHGATFASVELSEESEAKKTAVQVGDPFMEKLVMESCLELIDSGIVLGIQDMGAAGLTCSSAEMASKAGNGLELYLDQVPQREDGMTPYEMMLSESQERMLFVVEPKDEAQAQEIFDRWGVICRKVGKVTDDGRLKLFHHGEVVGDMPVTALVDECPIYKKPSAVPAYYEENASVDTLRYEEVKDLGGALHTVLASPTVASKAWVYNQYDYMVRTSTAVRPGSDAAVVTIHGTRKGLAMTTDCNGRYVYLDPEVGGRIAVSEAARNIVCSGAKPLAITDNLNFGSPEKPEIFWQMERAVDGMAEACRVLDTPVIGGNVSLYNENASGAIYPTPVVGMVGLVEDTDHITTQAFKQEGDAILLLGVTKAELGGSEFQYAVHGLTEGRPPELDLATEQKLLDAVLAAIRSGLVRSAHDLSEGGLAAALAESCISGSIGANVEWSAGGLRRDVALFSESQSRIVLTAAPGRAEELRAAVAAYGVPAEIIGTVGGGRLRVSLDGEAVLDETVAALKTTWEDAIPCLMK
>NZ_CP048429|2718818:2730312|2727914_2728532_+|WP_062524164.1|DBSCAN-SWA
MMQWSRIAVFASGQGSNFAALAEAERAGRLGGGRIELLVSDRPEAPVAKRAEEAGIPALLLRPKDFASRELYEAEIVAELQRRNIGLIVLAGYMRLITPVLLAPYAGRIVNIHPSLLPAFAGKDAIGQALDYGVKLTGVTVHFVDGGMDTGPVIAQRSVAVEPGDSAESLAERIHQVEYELYPEIVRALAEGRVMLDERKTVIRE
>NZ_CP048429|2718818:2730312|2718818_2720114_+|WP_062524157.1|DBSCAN-SWA
MIERYSRPEMRAIWTEENKFNAWLEVEICACEAWAELGVIPHEDAAKLRKDAKFDIGRINEIELETRHDVIAFTRAVSESLGAERKWVHYGLTSTDVVDTALGYLLRQANEILEKDIINFIEILKDKALAYKDTPMMGRTHGVHAEPTTFGLKMALWYEEMKRNLERFRHAANGVQFGKISGAVGTYANIDPFVEEFVCRKLGTSPAPISTQTLQRDRHAEYMAALALVATSLDKFATEIRALQKSEIREVEEAFAKGQKGSSAMPHKRNPIGCENISGLSRVIRGHMMTAYENVPLWHERDISHSSVERIILPDATMLLNYMLNRFGNIVKNLTVFPENMKRNMNRTFGVPFSGRILTKLIDKGFSREQAYDTVQPRAMQAWEEQTQFRDIVEATPEITAVLSPEEIEDAFNPTWHLKHVDTIFRKLELI
>NZ_CP048429|2718818:2730312|2724719_2726216_+|WP_062524161.1|DBSCAN-SWA
MSYEIKTGNRQENPILWTGDFYNEGTGSGDIFDTLKEECGVFGVFGHPEAASMSYYGLHALQHRGEESAGICVADGRDFHYHRGMGLVKEVFDKDKIASLIGNMSIGHVRYSTSGDSRLTNAQPLVFKYRDGDLAIATNGNIVNEPLIRKQLEQSGSIFQTTSDTEVLAHLIARSQKEFVEATKDALRQLVGGFAFLLMTNDKLIVASDTHGLRPLVMGRVGEAYIFASESCALEVIGAQFVRDIEPGELLVLDRNGFLEDRFAEPQRKALCAMEYIYFARPDSDLNGSNLHSARKRMGSRMALEAFVDADIVTGVPDSSISAAIGYAEQTGIPYELGLIKNKYTGRTFIQPSQELREQGVKMKLSAVRRVVEGQRVVMIDDSIVRGTTSRRIVNLLREAGATEVHVRITSPPFKNPCFYGIDTPDRRELIASYKTIEEMCKEINADSLAFLTPEGLIQSIGGYNSGDYKGGLCLSCFDNDYPTQVDFGGEEKDGCSC
>NZ_CP048429|2718818:2730312|2721821_2722511_+|WP_062524159.1|DBSCAN-SWA
MKFAVLVFPGSNCDIDCYKAVEDSLSEPVEYVWHTATDLSAYDCILVPGGFSYGDYLRCGAISRFAPVMGEVAKAAEQGKFVLGICNGFQILTEAGLLPGALRRNMSMKFRCHDTVLKVVNNTTPFTVDYAKDEEIVIPIAHGEGNYYCDEETMAGLKANNQIVFTYSDNPNGSVEHIAGICNVQGNVVGMMPHPERAANSLLGSEDGKRMFTSILKTWRDRYDAASIR

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062524157.1|2718818_2720114_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.9e-23	27.9
WP_062524158.1|2720489_2721380_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	2.2e-41	34.9
WP_019913657.1|2721570_2721816_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	2.2e-07	36.7
WP_062524159.1|2721821_2722511_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_062524160.1|2722488_2724735_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	2.8e-165	42.4
WP_062524161.1|2724719_2726216_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.7e-50	31.9
WP_062524163.1|2726877_2727918_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.2e-67	44.7
WP_062524164.1|2727914_2728532_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.7e-24	36.6
WP_062524165.1|2728764_2730312_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.6e-74	50.7

Sequences of DBSCAN-SWA_6

Nucleotide sequences of DBSCAN-SWA_6

>NZ_CP048429|6325254:6356377|DBSCAN-SWA
AATGAAAACTTATGACGCATTTCCGGAACCCATTGGCAGCTATACTGTTGGTCGAACCCAGATGGATGTAGAGTACACGGCATCAGATCACTCAAAAAGAGAACTGACGGCGTTTGTGTACTATCCGTCCGACAGTAGCGAAGGTAAGTCTACATCAACGTATATGTTTCCTGAAGTTTACGAGATGTTTAATGAGCAGCCAGTTAACATTCAATATCTTAAAGCGAAGGATGTCTTCTCTATAGATATCAAGACCCGGTGTTACGATGACCTTGCTCTCTCCGGGAAGGAAAAGCGCTATCCGGTGTTATTCTATGTTTGCGGCGGGGGCGGTTCTCCAGAATGGGGTACAGTGATCTGTACAGACTTGGCAAGCACGGGCTATGTTGTGGTAAGCATCGGCCATCAGAATAGCACGATGTATAAGCGTAAAGATGGGCGCCTGTTTAATGCATCAAAGGATTTTTCGCATGATCTTATGGCGTTTTCTGAAGATCCGGAGAGGCTGGCGTTGGCTGGTAAGATGGAGATGCGGCCTGACGATGAAACTGCCACCCAGATGTGCCGTAACATGCTTACACTGCCGATACTTGCCAAGTTCACAGAGTATAGTGAATTACAGGCAGAAGATGTAAGATATGTAGCCGACTATCTTTACAAACTGGACTCTGGAGAGCTGAATTCCATCTTTAAGGGCAGATTGCTCTTTGACATCGGCATGGGCATAGTCGGACATTCTTTTGGAGGGTCTACGGCGGCGATGGTTTGCCGGGACGACGACCGGTTCGCCTGCGGGATTGGCTTGGATAGCGGTGCGTTCGGCCTTCAGGGCAGCGACCTTAAGAAACCCTTCTTGCTGCTGTTTTGTGAACCCAACTATAACATGAACGCTATAATTGGCGCTAACAATAGCATGGAAACCTATTATTTCTCTGTTGATCGTGTTGCGCATTTAGATTACTGCGACATCGTGTTTACCAGTGTTAATGAGGAATTCAGAGGCGAACGGGATGCTATGGAGATGCGAAATCTTGTTACAGACTATACGAAGAACTTTTTTGATCATTATATACTGCAGAAGGCTGCGAGTGTGGAAAGTCTGGCATACGATGGCGTGGACTTGATCAAGAAAACCGGCAACAAGTGACATAACCGGGAGGTTGCTGATAAACGCATATCAAAGAGCTAGCCGTACAGACAAAAAGCCGATAACCCTATTACGCGGTTATCGGCTCTCTAAAAAATCCCGCCAATTGCTAGATACCTGTTTTCAGATCCGAAGCTTGAACAGGTATCCATATTTCACTTCTGTACGTGGGCGAGGTGGTATCCTGGCTCTCATTCCATAGCATTTCCGGCCCCTCGACTAACTCGTAGTTAGAAGAAGGGAACCATTCGGAGTAAATCCGGCCCCAAATATTCTGGAGGGTATCCGGAAAAGGCCCAACGGCTTCAAATACAGCCCATGTAGAAGCAGCAACCTCAAGCTGTGCAAAAGGCTCCGGACCTTCCAGTGTTGTAGCAACCCCGATGTAATGATCCAGCTCCCCTTTTTCTTCCATACGGCCCTCGGAGAAATTGACCGATGCACTGATGATCCCCGCCGGATTGGTATTCGACAGCTGCTTCAGTTCTGCGATCATCTGCAGGTTCAGGCTTTGCGCCATGGCGGCAATCTCCGGGTTCACACCGCTGAATTGAATGGGAACCCTCTTCTTCAGCCCGACAATACGAAACGCCTCTTTTTCCTCAATACGGTAATTCATTTCACTGCCTCCTCTTATAGTCAACTGAAAGGTCATCCGGGGGAAGGACTTCAGAGAGGGACTACCCGCCCGCGCTTCAGATGGAGTCACTCCGTGAAAAAGCTGGAACGCCTTTGTGAACGCATCCGGTGAACTGTATCCGACATGCACCGCCACGTCGATGATCCGCAGCCGGCTTTGTTGCAGCTCGAATGCGGCAATCGTAAGGCGTCTGCGGCGGATATACTCCGAGAGCGGCACCCCGGCAAGGAATGAAAACATCCGCTTGAAATGGTATTCGGAGCATAATGCCCGCCTGGTAACCTCTTTAAAATCAATCTCTTCTGTGAGATGATCTTCAATGTAGGATAATGCATCATTCATGTTCTCAATTACGTTCATGCTTTTGATCCTCCCCTCGAACCTAGAATAACAGCCTTTCAGAACCCGGTTCCGACAGTTCGTGCACAGATTTGACGGGTGGTTCCTTTAGTAGGTACTGCAATAATATACTATAGCCATTCCCCGGCAGGGTGTATATTCATGTGACTACTTGTATAGGGGGTCATTATGAACATCGCATCCTTCATTATCTACTGTATTGTGGTCACATTTACACCCGGGCCTACCAATATAGTTATTTTATCATCTGTGCAGCATCACGGTGCCCGCAAAACCATGGAATATGTCTGGGGAGCAACGATCGCCTTTGGTCTGCTGCTTGCCGCTTCTGCCTTGCTTAACCATGTGCTTGCCGGCATCATTCCAAATATACTGGACATCATGCAGATTGTTGGCAGTCTATATATGCTCTACCTGGCCTATCAAATCTATCGGATGGGGCGGGCGGAAGCTGCACCAATGCAGACCGCCAGTTTTGCCTCAGGCCTGTTCATGCAGTTAGTCAACCCGAAGGTGCTGCTGTTCACCTTAACCGTTATTCCCAGCTATGTCCTGCCTTATTATAGTTCATTTTCCGGTTCGTTTCTGTTTGTGCTGCTGATCACGGTTATCGGATTTCTGGCGTTTGTAACCTGGGTGGTTTGCGGCGCTGTCTTCAAAAATTTGCTGCAGCAGCATCACCGGTTGTTCAATACCCTGATGGCCCTGTTTCTGCTATACTCCGCAGTGATGGTGTCAGGGATTCTATAAAGCCTTGGAGGTGAGCCCAGTGGAGAAATTCAACTATGCCAAATCGGCAGATATCCTGTCCTTGTCAGCAAGCTTTACCGATTTCACTTACAAAAAGCACTGCCACGAAGAATACGCCATAGGTGTAACCTTGCGGGGGATTCAACAATATAATCTGGACGGCAGCTTCCAGGCTTCCCATAAAAATGGCGTCATGCTGTTCAACCGTGAACAGTACCATGACGGCAGCTCCTATGACAGGGAGGGCATTGATTATGTAATGCTGTACATCAAACCGGATTTGTTCTCCGAAATCCTCGGGGGTCAAGAATTGCGCTTCACCTCCCCTATTGTCTACGATGCTGATTTGGCTTCCTGCATTCTAAGCCTGGACCAATCGATCCGTAGCGGTGCAGATGATGCCTGGTCCAGTGAGCTGTTGTTCAAGCTGGGAGGCCTTGTGTCGAAGACGGAGATCGCCGCACCGAGAAGGAAGAACAATGCTTTTGTGCAAAAAGCGAAAGAAATGATGAACTCCCATATAGATCAAGTGCTGAAGCTGGATGACCTGTGTCAAGAATTCGGCCTGTCCAAATATCAGTTTATCCGTGAGTTCAAAAGCCATGCCGGCATTTCACCCTACCAATTTTTTCTGAACTGCAAGGTGGAGCGTGCCAAACAGGCCATTGAACGTTCAAGAGATATTTATGCAGCTGTGGCGGATTACGGCTTTGCCGATCTGCCCCATCTCAACCGGCATTTCAAAAGCATGTTCGGAATCACGGCTTTTGAATATATGTCGCAGCTTAGTTAGCCCCCTTGTTCTCCGGCTATTAACGATATATTTATTCATAGCAAACTTACTTCCGTGAGACACCTTTAATACAGAAAAAAGCCTGTAGAATTCGAACCCTGAACTGGGTACGGTCTACAGGCTTTTTTATTGCAGATGAAATGATAGCTGTTGTTCAGAACTTGAATTACTTAACGGCTGTTTCGCCGGTTACTTTACCTTCGAGGACAGCACTTGTTTTCAGATCATCGCTCTTAAAGTAGAGGTTACCGTCGATTGTTGCTGTTTTGTCGAGCGTAAATCCTTTGGCTTCTACATAAACGTCACCTTTGATTGTTCCGCCCTGCACTTTGAAGTTTTCACTCTGAACAGTCACCTTAGGAGCAGTCAGTGTATAGCTGGCAGTGATCTTGTGGTCTGCGTCTTGAGCATACAGAGCCAGTTTGCGGTAGATTGCATTTTCTGCTTTGCCTTTGTCATGGAATTCACCGGCAACAACCACATCGGTATCAACCGTCAGGTCATTCAGGATAGCTACAATCCAGTTGCCTTCCGCACTTACTGCTTTGGTAAAAGCATCCGCTTGGTTTACGATGGACGCTGAGCTTTGTGCATCTGTAGTTTCAGCCGCTGCACTTGCAGACGGAGAAGCACTAGCCGCTTCATTCGCTTTATCATTACTATTTCCACAACCTGACAGCAACGCTGCCGCCACACCTGCAACAACCAAACCTTTTACTAGCTTCACAACAATTCCCCCTGTTTTTTGGTATATTCATAGTATATATTAAAATTTTAATAATAACAACGTGATGAAATTCACAAATTTGTGTCTATCACTTTTTGAATATACAAATTCAGAGTATTTGGCAGTGCAGCCGCTTTTATGCAAGAATTATGTAAAACTCGACAGCAGCGACTGACACTGTTAGTCCAAACGGAGCGCTTGTCTAAGATTAGGCCATTTCGTCCAGCCGGACACATTTCAGGTTTCTGGTCTTCAGCTGGTTCAGCACTTCCTCCAGTGCCTGCAGCATATAATGAGGCGCATTTCCGTCCGCCCCCAGCGTATCTCCGCTGTCATGCAGCACAATAATAGATCCGTCCCGAATACGGTTCAACAGTGTTGAGCGCAGGGATGTCTGACATTTCTTCCGGCTCCAGTCATGTGCCATCAGCGACCACAGCACAATCCGGTACTGCTTCAGGCGCAAGAAATCAAAGATATTGATTAATCCCCAGGGAGGGCGGTAATGATCGGGTCTGGTGCCAACAATGGACTCCACAATATCTGCGGTCCGCTCCAGATGTCCACGCCGGATGGTGCCGGGCAGCATGAGCCAGTTCGAGGTATGGATATAATTATGAATGCCAATCTGATGGCCTTCCCGGTCCATTCTCTTGATCAGCTCAGGATATCGTTCCGCTTGCGCACCAAGGACGAAAAAGGTGGCTTTTACTTTGTACTGTGCCAGAAGATCCAGCAATCTGGGGGTGTATTCCGGATGCGGCCCGTCATCAAAGGTGAAAGCCACCTCCTTGGGAGATGTCCCCCGGCGCATGACGCCATATCCGGCCAGCCGCGTAAGCAGACTGGGAACTAACATATATAGAATAAAGATGCTGATGATTCCAATAGTCAGATGTAAGAGCATAGCTCCTCCTTCAGATCGATATTTTTTCTCCTGACAGCTTCTGCCCGGGAGAAAAACGGTTTTTCAGTGAAGCACGCGAATGAATCAGCAGCATCGGCACCAGCTTTTCGGTGTGTTGACTGACTCTGTGCTTCCCTTCCGGGTGCAGTGCAGACAGCAGCAGGCGGAGATAGATCGTCGTCATCCGTCTGAACAATCCCGGCTGCATGGCCTGCTGCTCAAAGCCTAGCCCATGCGTGATGCCCCGGTGCAGCAGCGTTATCCCCATCAGCGCCTTGACCTGCTTGAACTCTGACTGCGATTCGAAGGCTTCATTGATCTGGCGCATCGATTGGCGCATCATTCTCGCCGTGCGCAGTGCAGCCCGGTCTGAACCTTCCGACTGAATCAGCTTCAGGATGCTGCCATTGTCAAGGTGCAGCTCTCCTACCCATTCCCCATCATGAATGACCGTAGCATCCTGGCATACGATAGCCTGGCCTCTATGTTTTTTGAGCATCACACTGCAAATGCCAAAGCGGGAGGTACCGGCTCCGCGAAAATGTGAACCCAGGGCAAACACCTTTTCCCAGGCCATCCAGAGAGACTGCACCATAGTTTTTCCAATTTTCAGTTCCAATTCAATCATCCTTCCTCTAACAACTAATAAAGTTCACTTTTAATAATTACCTTTCCTTTGTATGACGCTTCCGGATGAAGTTTCCCTGCCTGCAAATTTAAAAGTGAAAGTTTGTTCTTCCGGATTTCCAGTTGTATCAGCTTAAGCAATGTCCTCACCACCCCATCTGTTCCACAAAATGATCTTCCAGTGAATGATTCTTTTTACTCAGGCTGTCCAGCTCCACGCCCGCTTCTACCAGTGCTTTATTCAGTTCAAGCTGTTGTACGGCATCGTAAATACGGATCGTCCGGGGGTCCAGCACCTTGTAGTTGGTGAGGCCCAGCTTATGCTCCAGCACATATACCGCTTTGCTGCTCGCTCCGGTAATCAGTTCGATGTATTGCGTGTTCCGGCTGCGGATCCTATCCATCGCCATTTCCTCCAGCAAAATTCCGTCACGGATCATGCCGATCGTGTCGGCAACCTGTTCAATCTCCCCCAGAATGTGGCTGGAGATTAGCAGCGTCATTCCATATTCCCGGCTCAGCATGCGGAACACTTCACGCAGTTCCTTGATGCCCATAGGGTCCAGTCCGTTGATCGGCTCATCCAGGATGAGCAGCTCCGGTTTGGTCATTACCGCCCGGGCAATAGCCAGCCGCTGCTTCATCCCCAGGGAGAACTGCTTGACCGGCTTTTTGTCCACACCCTCCAGCTTGACCAGCTCCAGTGCTTCATCCATGGCCTTCGTATTGTAGTAGCCCATATACTCTCCGTGCAGCTGGAGATTTTCTCTCGCCGTCAGCTTGTCGTAGAACACCGGATATTCAATAATGCAGCCCATGCGCTTCAGCATTTCATAGGAATGGTCTGTCATGCTCACTCCAAAAAATTCGATATACCCCTCTGTCGGCTTCACCAGATTGGTGATCATTTTCATTACCGTGGTTTTGCCTGCTCCATTCGGTCCCAGGAACCCGTAAATTTCACCTTGCTTGATATTCATGTTCACGCCGCTAACAACCTCTTTGCCTTGATACTCCTTAGTTAACTCCCATGTCCGCAATATGGTTGTCATTCCCGTTGTCCCCTTTTGCTTCTTCGTTTGGCTTCCTGGTTCATATTGTACACAGCAGAATTTTCTTTTTTATTACCTGAACCTTACAAAATTCTTAAGCAGCAGACAAACAACAGATTGGTGGAATATTCCTACATTTCTTGCGAGAGTTAAAAGCTCCATATCACCGCCTCCATGGTTGATCCAGTCAACTTATTGGAGTATATTTTCCCACACGGGCTTTTCCACGGCTGGTAAATATCTTCTGAGATGATAAAAAAGGCAACTCAGCAGATTCGCAGAGTTGCCTTTTGTGGAAAACTAGAGAGATGTTATGTTGTTACCGGACAGGCACCAGTTCCTGCTCACCTGCCTCCACGTTCCCCGTCTTCTTAATAAAGAATGAAAGAACCAGCCCGATTCCTCCAAAAATAATAACAGCCAGGTAAGCATCGTTCATTCCGGAAATGGAAGCTTCCAGCAGCAAATGCCGTGGATCGCCTGAAACTCCGGCAGCTGTCATATCTGCCAGATGAAACTGGGTACGATTCGTTAGAACCGTGACCAGAAGTGATGTTCCGATAGCACCCGCCACCTGCTTCACGGTGTTGGCGATTGCCGTCCCATGCGCATTCATAGCTTCCGGGAGCTGATTCAGCCCTGCGGTTGTAATCGGCATCAGAAAGAGAGCCATTCCGAGCCGTCTCCCGGTGGACATCAGCAGCAGATATGTGTAACTCGTAGAATCTGTAAGATGGATGAAGCCAAACGTGGTAAAAATCGTTATCAGAATGCCGATTATGGACAGCCACTTGGCCCCGAAGCGGTCGAACAGTCTGCCGGCGAGCGGCATCATCACGCCCATCAGCAGCGCACCCGGAAGCATCAGCAGCCCCGAATCCAGCGCGGAATAGCCTCTCATATTCTGCAGGTACAGGGGAAGCAGCATCATATCCGCATACATGACCACGGTTACCGCGATATTAATTAAGGTGGTCAGCGTGAACATATTGTATTTGAATGCTTTTAACTCCAGAAGCGGATTACTGCTTGTCAGCTGCCGCCAAGTGAACAGAATGAGCAGAACCACACCTGAAGCAAGTGTTGCAACCACTTCAGCGCTTGACCAGCCAATGCTTCCCGCCCGGCTGAAGCCGTACAACAATGTCCCGAAGCCCAGGGTTGACAAGATAAGGCCCCAGATATCCAGTTTGGGACGGGTCCGTTCCGTCACATTCTTCAAATAGAACCAGGCCAGAACCACCACTAATGCGGCAAAAGGAATGATGACATAAAAGAGTGACCGCCAGGAATAATGATCCAGTATATAGCCCGCATAGGTTGGACCGATTGCCGGGGCAAAAATGATGGCAAAGCCGATCATCCCCATCGCTCCCCCACGCTTCTCTACAGGGTATATTGCCAGAACAACATTCATCAACAGCGGCATAATAATCCCTGCCCCGGCAGCCTGGATCAGGCGTCCTGCAAGCAGCAGGCCGAAATTAGGGGCCGCACCGGCGAGAATTGAACCGCCCAGGAAAATAAGCATTGCCGACAGGAACAGCTCACGGGTCGTGAAGCGCTGCATAAAATAAGCGGTTACGGGAATAAAAACCCCGTTAACCAGCATATACCCGGTGGTCAGCCACTGGGCTGTAGCCGCCGATATCTGAAAATCTCCCATCAGCTCAGGTGTAGCCACACTCATAAGGGTCTGATTCAGCACAGCGATAAACGCGCCGAGAATCATGACAAACAGCAGCGGGCCTTTTTGAATTGGGGTTGGTTTGTTGCTTGTACTCATCTCCACTCATCCTCTAAACAAAAAAGTAGCACGACGTCGTGGAATCAGTGTACTGCCATGTCTCCCAAATAACAAAACACAATATTCCGCAAACTGTCTGTTATCAGACACTCTGGCAAATAGTGCCGATTATTCTTCAATTTATTGTGATTCTGTGAAGACTTCCTTAGCTATTCAGGCCTGCGGTTCAGCGCGGTCAGCAGCGGGCCGTCGCGGACTAGGCGGGTTAAGATCAGCGCCACTTGCTCCGGGGGAAGTGTTCTCCCCGATTCAAACCAGTGCCGGATGACTCCAAAATGCGCTGAGCTGAAGTATGCGACAATATAATCGTCCGGTACCGCCAAGGCATCCGGATTCATGGCCTGCCGGGGAAGCTTCTCATACATGCGGCTGTGAATCAGTGTTCTTAGTCTTTTTCCAAATGAAGTGCCTTCCTGGGCGAAAAAAACAGCAAAAAAACGGTGCCGTGCATTCATAAACCGGATAAATTCCACAATTGAGGGAAAAGGCTCTTCTGTACTCCCGCTGCCGAGCAGCTGTTCAGGTATGCTCTGGGCTGGCAGAGCGTTCATCTCTTCTATAATCTGATCCTCCATCTTCTCCATCAGATCATAAATATCCTGATAATGCAGATAGAAGGTGCCCCGGTTAATCCCTGCCTTGGAGGTGAGACTTCTAACATTCACACCTTCCAGCCCTTTCTCGTCAACAAGTGACAGAAAAGCTTCATCGATCAGTTTCTTTGTGCGGATCACCCGCAGATCAGCGGCTTTTTCCATAAAGCCCCTCCATTCCTTACACTTCAATCTTAATGAACACTATTCAAAATAGTGATTATTGTAAGTGTATTTTACCCTGATTATAATAAACACATGGTTCATAAATCAACACAATGTTAATTACACGAAGGAGGAAATAGTATGTTAAATCATAAAACAGCCGTCATTACAGGAGCTTCCAGCGGTATTGGACGTGCCATTTCCAGCCAGCTTGCAGGTGAAGGTGTACATGTTTTTATCACAGGAAGAAGCCTGGGGCAGCTCGAAAAGGTGAAAGCACAAATTGAACAAGCAGGCGGACAAGCAACCTGCAGCGCATTTGATCTCCGGGATACCGGCAGGCTGCAGGATTTCATCCGCCAGGCCCAGACGCAGACCGGTCATTTGGATATCATGGTCAACAATGCCGGTCTGCATATTCATGGGAATATTGTCGATACGAAGGTGGAGGACTGGCGGGAAATGATCGATGTCAACATCGTGGCGCTTCTGGCAGGCTCACAGGCAGCTGTCCAGGCTATGCGGCTGAATGAAGGCGGCGCCCCAGGCCATATTATTCATATTTCCTCAGGCAACGCCTACGAACCGGGACGGGATTTCTACAGCGCCACCAAACATATGGTGAATGCCATCGGACAGGCCTTGACACGTGAGCTGGCCCAAGAACCGATTCAGATAACAACGATTCTTCCTGGTGCTGTAGCCACCAACTTTGGACGAAACCTTGAACCGGAGGCAGTCGTACAGCTTGCCCGCAAGCTGGGGATGGAGGTCGATTACAAGCAGGGGGACCACCTGCCGGAAGAGCTGATTGCACGAATCCGCGGCGCGATGGGGCAGACCTTCTTGAGTGGCGATGATATCGCCAGAGCCGTAGTCTACGCGCTGCAGCAGCCGCAGAACGTAGTGGTCCGGGAGCTGTATCTTACTGCGCCGAATGTGTACCTTGGTAACGATTTCTCTATGTAGATTGCAGCATAAGTGGAAACGGCTTAGCCGTCCTTTTACAGGAGCCTATGCTTCCGAAGCAGCGATACAGAGTATCGCTTTCAGGTACCGTTTCAGCGGGAAATATAAGGATCACTTATTGCGTGAAGCATATAAATATTTTAAACAAGCCGCCTATCCCAATAAATTACGGGTTAGGCGGCTTTGTTTTTTCCGGGTATCCAAGACTTATTGCTCTTTGCTCTTGATCTCAAAGCTGCGGACCTTCATCCATTTCCCGGCCACGAATTCGTCAACGGTCCCGGTTCTGGTTCTGACGCAGAATCTATGCTGGGTCTTTTTGTAAAAACCCGTGGCTTCATAAAGCAAATCATCGCCTGCCTGACCCTTATAATAGACCTGCTTCAGGCCAAGCCTGCTCAGCAATTCTTGCTTTACACTCTCAATGTACGTGCGCGAATACTCTTTTGACATCCATGTTCCTCCTGCGGCATTCATCTACTGACCATTCTACACTTAAACCTGGCAAAATGTCAGTCCAGGGCGGACAAGCCCATGGGAATATTGTGAGAAGAGTTCAAGCTATGCTCCTTCTTCGACCGCCTGTTATGGGCAGCCCGCAGTCCGCCGCCGGACATAGCTATTTTGCCTGCCTGCGCCTAATTCAAAGGTACTTTTACCTCTCATTTCGCCATTTTGCCTGCCTGCGTCCAAATCAAAGGTACTTTTACCTCTCATTTCCCTATTTTTCCTGCCTGCGCCTAATTCAAAGGTACTTTTACCTCTCATTTCGCCATTTTGCCTGCCTGCGCCTAATTCAAAGGTACTTTTACCTCTCATTTCACCATTTTGCCTGCCTGCGCCTAATTCAAAGGTACTTTTACCTCTCATTTCGCCATTTTGCCTATCTGTGGCTAATTCAAAGGTACTTTTACCTCTCATTTCACTATTTTACCGCCTGCGCCCAATTCAAAGGTACTTTTACCTCTCATTTCGCCATTTTTCCTGCCTGTGGCTAATTCAAAGGTACTTTTACCTCTCATTTCATCAACATTCACCCCAGCGCGAAAATTTTCAAGTGATTCGCATGTTTTTACAGCTTGAATTACTATATTATTGAAAAAACAAAGCAGCCCCCACAGCTCTATAGCTGAAGGAACTGCTTATTCCGCCTCTTACAAGCGCCTTTCGGTTATGCGCCTGCGAGAGCTGTTACCTGAGTCTGAAGTTCATTCACCTGCTTCCGCATATCCTGGGCTTCCTTCTGCTGCTTCTGCACAACGGTAGTCAGCACAGCGATAATATCCATTAGGACAACGGACTTATGATCCGAGGTCGAGAAGATTTGCGGAACGTCCTCGGCGATGAAGCCGATATTCTGTTTCTTGGCATTTTCCGCTTTGTAGTTGAAGGTAACGGGCTTCAGCCTGTTCAGCAGCTCCAGAGCTTTTTTCACCGGAAGGCTGGCGATGTTCTCCTTGAAGGTTCTGGAAGAGGTCTGGGCGAAATTGGTCGCCCGCAGGTTGCCGTTCACGTCCAGCTTGTAATTGTCGGTTGGGGTTTTGCCGATCCCTACATTGCTGCTGGAGTCCACAGTCACCGCGCCTGCTACCTGAATCAGCTCATCATAGACGTCATCCTTGCAGACTAGAGTCTGCAAATTGTCTTCAATTCCGGCTTGCCATACATTGTTAGATGCATCCCAGGCAATCCGGGCTTTTTTGTCCGTTCCGCGGCTGACTTCAATGCCTTGGCTAACCGCCAGACTGCCGCTGATTACAGCATCCTTCACGGTCAGTTTATTGCTAACCGCAGCGTCTTTCGCTGTCAGCGCGGCGGTAACTGCCGCATTTAGAACCGTCAAAGTTCCACTAAGAGTCGCATCCTTCACGGTCAGAACTCCGGTTAGTGCTGCATCCTTTGCTGTCAATGTGCCGCTTAGTGCCGCATCGGCCACGGTCAGCTTCCCGGACACTGCCGCATTGCCGTTCACGTCGAGCTTGGCAGCCGGTGTACTGGTGCCAATTCCGATATTGCCTGAAGCAATCTTCAGCACTGCAGTCAGGTCTGCAAGCTCCTGGTGCGTATGGCCGCTGTAGGCAAGCTGCTTCAGGCTGCCTGCTATGCCAACCTGCCACTCATCCAAAGCTTCATTCCACAAAATTTGTGCTTTCGGATCTGCCCCTCTGCCCACTTCAATCCCCTGGCTGAGGGTAAGGCTGCCGCTGACGCTTGCGTCTTTGGCGGTTAAAGTTCCGCTGATGGCTGTGTCGACGACGGTCAATTTACCAGAGACTATCGCGTTGCCGTTCACATCCAGCTTAGCGGTTGGTGTTGCCGTGCCAATCCCGAGATTTCCGGAGGCTATCTTCAGCACACCGGTCAGAGCCGTCAGTTCCGGATGGGTGTGGCCGCTGTACGAAAGCTGCTTCATACTTCCGGCTACCCCAACCTGCCAGGTATCCGTAGATTCGTCCCAGAGAATCTGCGCTTTCGGATCTGCTCCCCTTTCGACGGCAATGCCTTGGCCGAGGGTAAGGCTGCCGCTGATAGCTGCATCCTTTGCGGTCAAGGTACCGCTGACTGCTGCATCCTTCGCCGTCAATGCACCGCTGACTGCTGCATCCTTAAATGCTGCCGTACCGTTCACAGCCACATCCTTAGCAGTCAGTGTTCCGGTAACTGCGGCATCCTTGGCCGTTAAGGTTCCGCTGGCAGCGGCGTCGACGGCGGTCAGCTTGCCGGAAACGGCCACATTGCCGTTGACATCCAGCTTGGCGGCAGGCGACGGGGTGCCGATCCCGATATTGCCGGAATCCACGGTAAATGCGCCGGACAATTCGGCGAACTCCGGATGGGTATGGCCTTTGAACTCAATAGCCTTCAGTGCATTCGGGACACCGGCCTGCCATTCATCGGCAGTTTCATCCCAGAGCAGTTGGGCTGGGAGCGCGGTCCCGCCGCGGAATACCTCCAGCCCGGCATTTTTGACAACCGGCGTTGCTTGGGGTGCATACTTGTTGACTCGAATAATGTTGTCTTCGACTTCCAGTGTGGCTGCATTAATCGTCACTGTATCGCCGTTCACAGTCAGATTGCCTGTTACGGTGAGATCCTTGGAGATGACGGCATTAACCGCAGTGAGGGTTCCCGTAACCGCTGTGTCGCCCTGAACATCAAGCTTGGATTTCGGATCATATGTCCCGATACCGACATTCCCTGCTCCGGTTACGCTAAAAGCCGTTAGCCCTCCCTTAATCTTGACATCCATAAGTGCCAGCGGCGTATTGGTTCCGATTCCTACTCTGCCTTCCGAATCCGCGAACAAGGCAATCGTATCACCAAGCGCGTTGTAGAGCTTGTTCTGGCCGCCTTTGCCCGTGCCGAATTCCGAGAGCGTAACTCCGTCGCCATAGAACCAGGCCTTCTGCACATTGTTCCAGAAGATCCGTGCATTCGGCAATTCCTGGCCGCTGCTGTCCAGCCCGCGCGGGGCCTCGAAGCCGCCCGCAACCACATTACCGGCCACGACTGCATTTTTGCTTACCGCAAGGTCTGCCGCATGAATCGCCTTGTTAAACGCAGCATCTTCCTCGAAGGTCGCCTCGCCATGGGCAGTGACCTTGCCCGAAAATGTTGCTGCTCCGGCGATTTCCGCCTCTGTCCGGAAAATAGCCTTGCCGGCCACATCCAGAACTTCAGTGGGATTATCTGTACCTACCCCTACTTTGCCGCTGCGGGTCAGGCTGAGTACAGCCTTACCTGCGGTCCCCAGCTTCCAGCGGTCCTTCGCCCATTTGATCTGTGCGCTCGTCTCCGTTCCCTGGAGGACCTCAAGTCCGTCACCAACGGTCACCGTTCCGGCAATAGCTGCACTGGCAGCGGTCACCGCACCAAGGACACTGGCGTTAGCAGCCTTCAGTCCGCCGGATACATTGACATTACCTGATGTATCAACGACCATTGCGGCAGGTTCTGTAGGCGTTGCAAGCTGCCACTCATCCTTAGTCTCGTCCCAGGAAATCTTGGCAGCAGGCTGGTTCAGTCCCCGGTAGATTTCCAAACCCCCGCCGGAAAGTGAAGAAACCTCATCGCCATCCTTATTGACCGTGACCCATGGACTGCCGATGTCCAGTTCGTCCGTAGTGATGCTGGCAGAAGTCCCCCGGACTTCTAGATTTCCGGCCACAGTAAGATTGCTGCCGACTGACAGATCATGATGGACATCCACATCCCCCTCGGCACTCGCGCTTAGTGCCAGTATATCGGTCTGCGGATTGTAAATCTGGCTGTGGATGTGCAGGGAATCCGCACTCGCCATTTGTGTCAGCTTGTCCCAGGAGCTGCCGCTTGCGATATTTTCCAGAGCGCTGCCTATGCCAACCTTCCATTTGCGTTCATTCTCATTCCAGATAATTCTGGCTGCAGGCTGCGATTCACCCCGGTAGACCTCAATCCCGCTCTCATTCGCAGGTGGAGTCCCGCCTTTGAACTTGTTAATCTCGATTACATTATTGGTAACGACCAGATCTTCACGTTCAACGGTAGTCGTGGTGCCTTTGACAATCAGGTTGCCGTCGACCTTAAGCAGACCTTGCACCGCCAGCCCGCCGCTGATATCCGCGCCATTGTCGACAGTAAGTGTTCCCTGTACCTCTGCGCTGTTCGTAATCTCGATATCGCCTTTGGCGGTTGCCTGGATTACAGTGTTGCCCTTGCTGTCACTTAGAGAGTTATGCCGGTGCAGGCCATCCGCATCCGAGCTAACCCCTCCGGTCAGCGCATCCCAATTGCTGCCGTACGCAATATTGGACAGCTCATCTCCCAGCCCCAGCTTCCATCTGCCGTCCGTCTCGCTCCAGACCAGCCTGGCGCTCGGATTCAGCTTCCCCCGGTAGACGTCAATGCTGCTCTGGTTCAAGGTGGAGCTGTTGCCTTCGAATTTGTTCAGCTCAATCCGGTTGCTGACGACAACCATATCTACTTTGTCCACATAGGTGGTCTTGCCCTTTACCGTCAGGTTGCCCTCGATGGTAGCAGAGCCGCCCACATTCAGATCAGCCTTGAGCTCAGCATTGCCCTTGCCCTTCAGGGTTCCGCCAATCTCAAGGCTCCCGGAGGCAGACACCTTCCCCTGGTCATCGGCGGAGAGGATCGTTCCGCCTGACGGTGTGCTCAGCGCACTGTGCTTGTGGGCCGCATCGGCCAGCGAGCCGTTCGTCAGCGAATCCCATTTGCTTCCATACGGAATGTCGGACATGCTGCCTTCGAGCCCGATTTTCCACTTGCGCTCCGCCTCGTTCCATTCCATGCGGGCATTCGGATTCTGGATGCCCCGGTATACATCCAGGCCCCCTTTGCTGCCAAGTACTGCATCATTTTCTCCCTTGTTCACGGTCAGGAAGCTGTCCGCAACCTCCTGCTCCACTTTCTTGATGACTACCTCTTCTTCCCTGACAATCAGCTTGTTGACCGTAAGCGTCTCACCGACCATCAGCTCATGCGGAATACTCACATTTCCGTCAGCGCCAATCTCCAGAGCCAGCAGGCTTTTATCCTCATTATGGAATTGTCTGTGGGTATGCAGGGCATCCGCGTTGCCAGTTCCGCCGGTCAGCTCTTCCCACTGCTTCCCGTCCGGGATATCCGTCATGTCTCCGTTTGCCGTACCGGTCTGCCAGGACTTCGTCGCCTCGTTCCAGGCAATCTTGGCATTAGGCAGTGTCTCTCCCCGGAAGACTTCCAGCCCGCCCTGCTTGGACACCAGGCTTCCTGACACGGTCAGTGTCTGGTCAATCTGGACATTCCCCTGCTTATCAGTGCGGAGAGCCGGCTTCCCGTCCGCCGAATGCAGCTGACTGTGGGTATGCAGGCTGTCGGCAAGCGAGCCGCCATGCAGCTGCTCCCACTCTGCTCCATAGGCGACATGGAACATGCCGCTAGCCGCGTCCCCCTCTTTCATATCGGTTCCAATCATCCACCCTTTGCTCTTTTCATCCCACAGGAGCTTGGCGCTGGGCTGGTCCTTGCGGATGATTTCAAAACCGCTATTGTTTTCCTTACTGGCATTTTTGTTGAGCGTAACCATATTTCCGCCCACCATGACCTGAGGCACATCCAGTATAGCCATGCCTCCGCTGACATCAATCCCGCTTTTGGCAGAGAAGGGTCCGGCTACGGCTACGGAACCCGACATATCCACGTCCCCGGTATCATTAACTTTGAATACCTGCTCACTGCCGGCAGTGACAGAAAACTCGCCGTTTACATCCATGGCTCCATAGGAGCTGATTGCTCCGGTCCTCAGATTGCCCGTAAATTCAGTCAAGGCAGCGTGAACATTGAGCTTATTTCCCTCTTTCCCATCCTCTTTGACGGAGTTGCTCAAGAATGGCTGGTCCGGATCATCCTTGGATCCGACAATAATTTTATCAGCTTTAAGCGTTTCTCCGCCTATGGCTCTGGTTACTAGTAGCGTTCCGTCCACGTCCGTATCATAAATCTGGTCGATGCTAAGCGCTCCGTCCTGATTATGCTTCAGGGTTACACGGCCTAACAGGATGTCCTTGCGCACATCCTTAGGCTTCTGTGAACTGGCTTTAATCTCCGCTTTTTCCCACACATGAATTTTATTCCCGCCCCCCTTGAGGAGGTCGGCGTCTGCCAGCTCTTCCTTGTAGCTGACTGAAATATAGATCTGATCCGAGGTGCTGTATCCGGACAGATCCAGCACCCTCGCCGGATGGGTGTCGCTGACCAGAATTTCCTGGCTGGTCTCTTCATTGTTGTCCGGGTCCGTGATCCGGTTCAGGGCAAACCCCGGATCAATCTCTACTTTGACCAGCTCCTTTGGATTGACCTTAAGTCCGGTTACAACTCCCCAGTTGTGGAAATAACGGTTATGCAGCCCGCGGGCGCGCTTATGATAATTCTGATCCAGTGTCAAGTCCTCTTCCTTAAGCAGCAGCCCGTTGAAATAATTCATGCGTTTCATATCCTTTGGCACAATCCCACTCCTCCCGGCTTTCATAGTTACAGCTTATTCAGTCTTGAACGGACTCCTCTTCGCCGGCAGACAATTCCTCCAGCACCTGGATGGCCCCGCTGATCCGTGTCATGGCATACCCCAGATTGCTGCGTTTCTCATCCAGCTCCTGCATCATTTGCCGGCCGGATTCGAGTTCTGCCTTCAGTTCCTTCATGCGCGCTTCCAATTGTTCTTTCATCATTTCATCCTCCAATTTTTAGGCACCCTGCAGGGTTGCGATTTGTTTTTGCATTCTGGCTATAGCCTTCTGCTGGTCTTTCATTACACTGGTCAGAACGGCGATGATATCCATCCCGCTGATGGCCCGCTGGTCGGGGTCGGCCAGAACGGCCGGCACCTCTTCAGCGATAAAACCAAGCGTTCTTTCCTTGGTGCTTCCTTTGTATTTAAAAGAAACCGGGTTCAGCCCGTCGAGCAGCTGCTTCGCTTCTTTGACAGGAATATCGGCGATGTTGTCCTTCAGCTCGCGTGAGGACCACCAATACATGCTGCCGTTGGCATAGACCCCGCCGCTGGCATGAAGATAAATGCGGTCCCCGGCGTCATTGGATACACCGATATCCAGCACGCAGTTTTCCCCGCTGGTCGGGTAGAACTTGATCCAAGCTGAGTCGCCGCTGCCGCCGCCGGGATCGGAAGGGAAGATAATCCCGTTATTGCCGCTGCCCGCACTGGGTAATAGGGCATTTTTCACTTCAAGGCTGCTGTGAACCGAAGCGTATGACCAGTCATTGCCGTAATTGAGCACCAGATGGCTTCCATTATCCACCAGGGCTCTGCCGGGAGCTCCGCGGCGTCCGGAATAACCGATGTAGAAGTCGGCACAGCGTACATACGCGGCAAAATTATCTGCTACATCCAGCTTTTTGAACCGCCCGTCAAAGTTGAACACATCGGTCTTGATGCTTCCTGTGATCTGCAGATCCCCTGTAATGCGGGCGCTGCCGTTCACCTGCAGGAATCCGTTCACATCCAGCTGATCCCAGACCGCAACCTTCCGTTTGCCGTCCGGGGAGGACGAGTTGCCGATCAGCATCAAGGATTTGTAGGTGGTGGTATCATTGCTGATCTCCGCCTGATTATGGGCCTGATCCGGGAATCCCGACCAGGCCGAGGTGAACCGGATCGGATTCTTGCCGCTCAGGACACGCAGCTCCCCGGCCACATCCAGCTTATCTGCCGGAGTCAGCGTTCCAATGCCTACATTGCCGGAAGCATTCAGCGAGATGTGGTCATTGGCATCATTGGAGGTGCCAATCTCCAGTGTGCAATCCTCGCCGATTCGGGGATAATATTTGATCCACGCCAGGTCTGCACCGCCGCCGCCCGGATTCGCCGGGAAGATGATGCCGTTGTGCTCGCCTTTGCCTGCACTTGGAATGATTTCCTGGGCCGCCTGCATTTTACCGTTCACGTACAGAAATCCGTTCACATCGAGGCGGTCCCAGATCGCAACCTTTCTTCCTTGTCCGGCTGACTGGTTGCCCACAATCATCAGTGCTTTATGATCGGTGATATCATTGCTGATCTCTGCACCGTTAATCTGATTGTCGGGAAATCCCGACCACGCAGAGGTGAAGCGGACAGGGTTCCTGCCGCTGAGGATACGCAGGCTGCCATCGACATCCAGGGAATCCTCCAGCGCCTTCCGGGGGCCGATTCCGACATATCCGGCCTTATTCCAGGAGAGAACCGGCCGGTCGGTCCGTGAACCGTCGCCGTTGGCCGTTCTGGTGCCCAGAACACCGCCGCTGTTCCCGAATAATACAGGCCCGTCCACCTCAGATGCGGCAAAAGGCTTCCCTGCGCCGAACCAGCCAAGACCATGCGAGCTGTCAATCGTGTCCGGGTTCGTCCCCTTAAGCCATAAGGTTGTCCCGTCCCTCAGCGCCAGATCCGCATCGCTGAACAGCTTGCCCGAACTGTTAAAGCTAACCGACGCTCCGCCCGGTGACGACAGCCTGCTGTGCCTGTGCAGCAGGTCGGCGAACTCATTCTTGATCAGGCTGTCCCACTCGTTGCCATAGGCAATTTTTTTGAGATCGGTGCCAAGACCGGCCTTGAAGCATTGATCCGCCTCCACCCACACGATCCGTGCATCATGAATGCCGCCGTCCCCCCGGTAGACCTCAAGCCCGCCATCCCGCGGTCCCGGAAACTCATAATCCGGATCATCCGTGTTGGGACTGTTGACCTCCACGAAGCTGTTCATGATCCGCATTTCACTCTGCGATTTATCCTTGCTCTGCAGAATAAGCTCACCCTGAAGCGTTAAATCTCCGGCGATGTTGAGCGCCCCGGTAAAACGGGTCTCAGGTGCCCTGACCTCCAGCACCTTGCCTTCCTGGAGCGTGTATACCGAAGGCATAGCAGCCAGCGTTTCTTCATTCAGCTCCATGTTGTCGATGCTGTCATCACTTTTTGCTTTGATAATCAGCTTCTCTGTAACCATCTTTTTGCCTGCTGCACCAGCGTAGGTCCGGAGCGGCGTGCGGGCCGCGTCACTGTCATAGTCGAAGATACATGCGCTGTCGATTACGATTCCATTGCTGTCCTTGCGCGGGACAATCCGGGCCAGAACAATATGTTCTGAGCTGTCAGGCTTCTTGGTACCGTGGCTGATCCGCCCCCGCTCCCAGATGTGAATCTTCTCGCCCTGGCCCCGTTCAATATTGCGGTCAGTGTCCATCTCTTCATAGCTGACCCAAATATAGATGGTTTCGTTGGCGTTATACTCGGACAGGTCCACCGGATTGTCGGGATGTCCCTCGTAGATGAGGATTTCCTGGCTGATGCTCTCTTTCTTCTTAGCGGCTGCATCTTCAATCACTACCTGATTCAAAGCCAGGCCATCGGCTATCTTAACCTTCATGTATTCTCCCGGATCCAGCACAGGGAGCACCTTCAGCCCGCAGACAATGCCCCAGGTATGCAGATAGCGGTTATGCAGCCGCTGCAGGCGCAAGTAAAAGTCCTGGTCCAGCTTATAATCCTCCGCATTCAGGAAGAGCCCGTCAAAGTAACGCATTCTTTCAAATTTTTTCCCCATGATTCACTTGCCTCCGTTCTCTATTCTCTAATCCTCTGTCATACCCCCGAGCAAGGTCTCCATTCCAACACGTCCGTACACTCCCAGGCACATTTTCGGAACTTCAATATTCAAGCTGGAATTGGTGTAAAAAGGTTTTTCCTTCCGGATCACCTCTTGCAGGATTTGCACTTTGTTCTGCAGGATGCTCCGGCTGTATGCGGGAAGGATGACATGAACGGAGAAATAGCTCGGCTCTGCCGCCCCCACCATTGTATTAATTCCCACACGCTGCCCAATACCGCAGCGGACAGGCTCTTCGTAATCATGGATCTGAATGGCGGCCTCTTCACCCGCATAGACCTGCAAATATTCCGCGAGCCCATCCAGCGTTCCGCGTTTTTTGTAGAGCTGGACAATGCTGCTGATCAGATTGCGGTTGACGGTGCTGCGGGCCGCAGGAAGCGGGAGAATCTGCATAGGGGCAAGCGCACAGTCCCGGTTGTCCTGTTCCCCGTCATATTCCACACCTTCCGCAAGCTCCAGTCCTACCCAGCCTGCGAGCCAGGGCAGAAACTGGGCAGGGGCCGTGCCGGGATCAAAATACTGATGCATTCCATCCAGCAGTGCTTCAATCCCTACCGACTCTTTCCCGGCCGCTCCTGTTTTACCGGAGAGCATGGCTTCAAAGGCCTTCAGGAACCGGCCCAGAAAAAATTGTTCGTCCGATTCCCCTGCTTTCTGCTGAAACACTCTTGGAAGGTACTGCACATAGCTATAATCGTTCTGGCTGCTCACGATTCCACCTCAACTTTCAGGTCTTTCAGCTTAAATAACTGGAACGGCAGCAGATCGGGAGAGTCCAGCGCCACACTCGTTACATGGTCGATTCCAGATATGCCTTCTACGAGATGATAGAGATCAGAGGCGTACAGCTTTCGGCCCGGAAGCCAGCCCCGGCCTTGCTCTCCTCCGCTGACCGGGTCCAGAAAACGCGTAATGCTGCCGGTAACTGTGCTGCCGATACTTTTGTCCTTGGCGGAAACGACCATCTCGATCACGATATCCCGGTAATCGGGCTCGACCACATGGACACGCGTGGTCAGCAGCTTGCGGGCGTCCAGATAAGCTTTGACGCTCTGCTTGATCTGCGTCATTTCTCTCAGCAGGTCCTTCTGGTTATCCGTCTGCAGAATCAATACCACAGAGACATGGCCGAATGCCTCTTTGTTCACTCCGGTGCCGTTCTCCATATCTGTGTTAATGAGACAGAGGGTGCGCACCGCAAGGTCGGGATACGTGTCCAGAATGCCCGGGATATCCAGCAGGCTCTGCTTGGCCAACAGCTGGAAATCTGCCGCCGTCACGGCTCTGTAGCACTCCGAGAACTGCTTCACCCCGCGCCGTATCCCGCTGGTCAGCTCCTCCTCTTCTGCCAGAGTAACGCCCAGCAGCTTGAGAAACTGCAGCTGGCTCTCTTCCGTCACCTGGTCAATCCGGTAGAGAACCATTTCGCTGAACCATGCAAACAGCTCTATCAGTGTGATGCCGGGGTCGGAGGGATTATAATTCGTCCAATCCGGATCGTAGAGCGGGATCAGCGTTTTGGCATCCGCCACTAGCTCATCAAAGCCAAGATCATCCAGGTTGGGTACTGGAAGCGGCATGGGTTCTTCCTCCTTTGTTGTATAAGCTTTAAGCTCAACTTATACAGGTTATTTTCTTATGGCTGCTCCTCCGGAAAACAATAAGGGCACCGTGCCGCCGTCCCGGGTGCAGCCCCAAGGCCGGTCAGAAACTTCCGGTTCTCCTTGAGGATGGCTGCAAGCCGGCAGTCTTCCGTGGTTCCGGTCAAATCATGAAGCAGGCCTGTGTTCTTATCCAGAAGATATGGGAAGATGTGCTCTTCCGGCTTATTAATCAGATGCGTCCCGCCATAGATCAGTTCGTCCTCCTCAAGGAAGATATTGTCCGAGTGGATGCTATGGATCTTGAGCGGGGTGGTGTTGACATACTCATCGGTCTTGCTTAAGAAGACAATATCCTTCGGCTCAAACACGGCGATTTTCACAAAAAACGAAACAGCACCTGAAGCCAGCCCGTTAAGAATATAGGTGCGGACTGTTAAATCATCGGTGATGTCATATTCAAGGTCGCTGCCTTCAGGATAGCTCCGCTCCAGCGGTTGCCCGTCCAGCGTCTGACATTCCAGGATGTCCCCGTCGATGGATGCGACGATCAGCCCGACCGGCTCATAGGTTCTGTAGCGGAGCCTGATCACTCCATTCTCCTTGAACCCCTTAAGCACCAGCGATTTCACTTCGCTCCCGGGCTCAACCCGCTCGGCAAGCGCAAATTGAATGGAATTGTCGTCAGAACGGACCGCACTGTATTTCGGGTAAGCTGCCAAAGGTTTATAAGGCCCGCTCTCCAAAGGTTCAAGACTTACCGTAAAGCACTGCACCGAAGCCTTGATGGCAATGCTGGATACATAATCGACACCCGGTGTATTCTTGATCACAGCATATACCTCGGATATATACAGGTTCTGTCCCAGCTCCCAGCCCGCAGCCCCGTCTCCGCCATTGAGGGGATGAAAAAACTGCTTCAGGTTGTCGATGATCCGTCCCTCCGCCACCTTCCGCTGTTCTGCCGAGGTGAACGCTACAGCGGCTTCCACTCCGATCCGCACATAATCCGGGCCGATTACTTCAATTCCCGGGTCGCTCGTGTCCAGTGCCGCCGAGATGCGTTCGCACAGATAGGCTTCAATTTCACTGAGCAGTTCCTGACTGGGGACCGGCTTTGGCTCGTCCGTTTCCGGCACCACAATGATTGTGGCTGTGCCCGGGACGAATTCCAGATCACGGTTCATGGCGCTCAGGCATTTCACCTTGGCAATCTGGGGCATCGCCTCACGCACCAGCCACTCTATGTCCCCGGCGGTAACGCCTCTGTCCCAGCTTTTCAGCGTATGCGGCCCGCGGATTTGAGCCTGCTCCGCCGCCTCCTGGTCAAAGCCGCCGTCCGCCGCCACCGGATTCGTCACCGAATCCAGCCAGCTGAAGCTGTCCCATATCTTGGTTACCGCTCCTGCAGCAACATTGCCGGCTGCTCCGCCGCCATACTTATAATCGCACTCGATGTTGTCGGTCCCGGTCGGCGGGATCATCCCGTTCCTTCCGTCCCCGAAGATGATCGTCCCGCTGCTTCGGTCCAGCATATAGTGCCTTCCGTCCGAGGCGGACAAGGCAAAAGTGTCGACTTCCTCCCACAGCACCCACTCGCCTTGCCCCGGTGCCTCCCGGACCCGAAGGCTCTGTCCAGGCAGCACAGGCGTCTTGGATAATTGGAAGCTCTGGTTCTCTTCGCCGTTGCTGGAGCCCGGAATCTCACCGGCAACCGAATTGGAATTGCGGGCCCATACCGCATTAGCAAAGATGGCATCTACCTGGGGAAAGATCTCAAAACGTCCCTCATCCAGCCGGGCACGGATCCAATATTGCTCTGTTCCGAACAGCGGGCGTTTAGCGATATCCGCTGGAACGGCAAACTGCAGAATCTCCCTGCGGGTGAAGCCCCTGATCTCGTCATTTACACTTAACGTCAGCCATCTTCTGCCGTCCCAGTACTCCCAGGCCACAACCGGACGCCTCAGCTGTTCCCCGGTTAACGGAAAAAAGAGCGATACCGGCAGATCGCTGATGTCACGGTCAAAGCCCAGATAGAACGTAGGCTCAAGCTCTGCACAAGGGTAAAAGGGTTTGAAATATTCCCCTTCCGCCAGACAGGCAGCCGTTTTGTCCGCAAAGCTGAAATTATTCTCCGTAAGCACCGTTTGCGGGTGCCCCTCCAGCGTATGGCTGTAAGCAATGCTGAGCCTGCGGATGGAAGGCGGAGCATAGGTTGCTTGTGTAACCTTCAGCTGGGCTACCTTGATGGTTCCCTCCCCGAGCTTGACCTCTTCATCCTGGTATTCATATTTCGCTTCCTCGCCATAATTCCCGCCGGTGATGCGGGCACGGATCCAGTAGCGCTCTTCCCCGTTCAGCGTCAGCGGCTTGATCCCCGGACACTGGAAGCTGAGCATTCCACTGGCGGTAAGGCAGGCGCTGCTGCGCGTACTGCCGGCTGCAGCCGCAGCTTCTCCGTCCAGCGTCTCTTCCAGGCTGCCGATACCGAGCCATTCCTTGCCGTTCCAGTACTCCCAGCCGAGTCTCACATAAGGGGTATCCGGCAGCTTGCTGATTTCCGGATCAGACAGCTCAATCTTCAGCGTAATCCGGGAACCCGGTTTGGAGAAGGCTTCACTGCAGGCGATATAGAAGGTGTCGTTCACCTTGGGCTTGTCCCCAAAAGGATAATAATCCTTGCTCATATCCAGCGGAGTGCCGTTGTTGACCGCCATATCCGGCGTCAGCGGCACCGGGCTCACCAGCTTAAGCTCCAAGCGGATATCTTCGATATCCGGCATCAGCGCGGCGGCGGTAATGGGTGTCTTCAGCTCGGCAAATATCCACTTATTGGACCATTCCCGCATATGCTCCGCCTGCTCATAACCGGCAATCGTCTTCGCATGAACTCCGGACAGGTGATCGAACTGAACCACCGCCCTCCAGGCAGAATCCTCCTTAATCCCGGCCATTGACGGCGAGAGCTGTACGGTATTCCCCTCCTCATCGAAGCAGAACCAGTCCATATCGGGCAGACCCCCGGTCCCTCCTGGCGTATCCGCAGCCACAGCCAAAGCTGCTTCCGGCTTGTTGAAATAAACCGACAAGCGGCTGCCCGCTTCTTCGAACCCGAGCAGCTCCGAATGTCCCAGGTACAGCCTGTGAACCACCGTCGAGTCGCCTCTGAACAATTTGGCCTTTTGGCCGGAGGGCTCCTCAGCAAAGAGATAATCCTGATTGCTCCACTGGTCTTCCTGGGGATCCAGGCTTACGGCCCTGACCAGCCGGGGCTGGATGACCGTCAAATCCTTTTCGGTTTCAAAAACCACCTCTGCCTGATTCTCGGGCTGGGCGGATACCCGGGTCCCAGCCGGAATCGTGCTGACGGTATCCGCATCAGGCTTCTGCTTAAAGAGCAGCGGGACTTTGGCTGATCTGGGCGGTGTCGGATGAATGCCGATCAGATTCAGAAAGGATATGAAATTTTTCTCGGGCGCCTTGTTCAGCCGGCCGATGACTTTGCCCATCATTTGGGTGAAAATATGGACCAGAGCATCCGCCTTCTTGTCTGCTTCCAGCTCCGTCAGATCCGTCCATTCCCTGCTGCAGTATTGGTAGATTAAGCGTCTTAGCTCCGGAACCAGCTGTTCCTGATTCCGCTTGTCAATGGTAGGCACTTTGTTTGGCATTATTTCCCCACGCTTTCAAGGAAGAATGGATAGACCAGATTATATTTGCTGTTGCTGGCCCTGATCGAATAGTCAATGGACACCTCCAGTTGAGACTGGTCGGAGCGCGGTGTGACGGTAATATCGTCCACTTCGATCCGCGGCTCCCAGTTCTGCAGCGCTTCTTCAATAAAGCTTCGCAGCAGCGTAGCGGTGCTCATGGTATTAGGCGAGAACACCAGCTCGTTCAGCCTGCAGCCGAAATCCGGCCGCATGACCCGTTCGCCGCGGGCGGTTGAAAGGATCAGGAGGATCGATTCCCGGATGGAATCTTCTCCATCTGAAGAATTGATGTTCCCTCTCTGGACGGCGAAGGGATATTTCCAGCCCCGTCCCAAAAAATCTACGACTTCCATAATTCAGCCTCCTATTAAGACCGTTCCTGCCGCAACCACCTTGCCTACCGGCAGGTCGGCCGAATCATTGCATGTCAGCGCCGGATCGCTGTGTCTGGCGGCCATTTTTCCGTTGATTTTTACGCTAGCGCTTCCGGCGATGATTTTCCCCTGATTGGTCGGAGGCTTTTGAAAAGGGCCTCCCTGCGGAACATGTGCCGGTGTATTCGTGGCTGTGGAATCCACTGTAGCTGCCGGCTGCCCCATTATTTTGACATTGGCGCTAAGCGCGCCGTCCAGAATGCCCGTAAAAGGATGGGGCAATGGCGTCGGAACGGGCGCAGGACCGGCAGGAAGCATCACGATATGCGTATCGGTGGCCAGAATGCGGTCTCCTTTTTTCGCAGCAGGCTGTCCCATAATGAAGCTCCTCTCTAATTGATATTGACCGTAGCCCCTTTGATCGTCATGCTGGCTGCTGCTTTGACATCCATCCCCGCCGAAGCTTCAATCCTGGTGTCCGCCGATGATTTCATTTCAATCGTTTTCGCGGAGAGGGACAGCTTCCCGCCGGGGGCGGATATTTCGATATCCTGTCCAGACAGAACCGACAGCTTATTCCCTTTGGAATCTATGACGATTTTGTTCTTCCCCGATTGATCCATGATCTGGATCTGCTCGGCGCCGCTTTTGTCATCCAGCTTGATGACATGACCTTTGGCGGAAGTAAGCGTGATGTTCTCTTTCCCCTCGGTATCGGCAAACTGCAGAATATGCCCGCTGCGGGATTTGAACATCCGGATATTATTTTTGCCGTCCTTGTTAGTCTCCGGCGGTGTATCCTTTCCGTTCCACAAGGACCCGATCACATAGGGGCGGTTGACATCTCCATTCTCAAAAACCACCAGCACCTCATCATCCACTTCAGGCAGACAAAAAGCCCCCCGCTCCTTTCCGGCCATCCATGAAGCCATCCGGGCCCAGTTGGATTCCGCCATGCCCATCAGCGGGATCTTTACCTTGACCCGGCCGGGACCGGGTTTATCCGCATGGTTCGCGGAGTTATTGTTAATGACAATCCCCACCATCACTCCGAAGATCCGTCCCTCGTTAACCATGCTGTCGGCAAAATTAGTAATTCCAGGTCCCTCATTCATAGGCCAGTCCTCTTTACCTTAAAAGTCGTTGTATAGCCCTTGCTGTCTATCTTGTGAACCGTGGATACAATATAGTAAATACCGCTGAAGCGGTCGCCCAGGCCGAGCAGCTTCACCGTCTGGCCTGCCCGGAGCAGCGGATTCCCCCAGCACATGCCCTCCCCGGCGATGAAGTCGCGCAGGCGGCTGTTGTAGGCGGCGGAAGCCAATGTTTTGGCCTCGCTCATATCGAGCAGATGCTCCGCCATGATGGCGATCGGCGATTCCTCAATGGCTTTGGCGCTTAAGGAGAAGCCGGATTCTGTGCCGCCCATCTTGGTCGTCTCGTCTCCAGTCTTCGCTTCAGCTTCCAGCGCCTTCTTCTCCTTCACGTCCCAGCCCTTTACCTTCACCTTGCTCCCCCGGGTAAGGGCCCTCAGCTCCAGATTCAGCCGTTCAAAATCCTTCTTGAAACTCATCTCCGGCAGACCGGGCGCTTTCACCGACCTTGACTTGACGAAATACAGCTTCTTGTCGTCCACATAAAGCTCATAATCGAGCATAGCCGCCCGTTCCAGCAGAAACTCATAATTGCTCTGATTATTCTGGAATATGTAGGGATACACGGTTCCGGTATCGTCTACCACAGGGGTCAGTCCATGCTCTTTGGCGATTTCCGAAGCGATGTCGCTGTCCTTTTTCTTCAGAAAAGCTTTGCTTCTCGTCCCCATACGAAGCCTGTGCAGCAGGTCGTACCCGCGAATGTCCAGCACGGAATGCTCCGCAAAATTCAGATCCAGCGCGGTAATCTCCCCGCTGATCATCGGCTGGAGCTTGTCGAGTCCAAGTGAAAGCTTCACCTTGTCCCCCGGCTTGATACTCTTGAGATCGGTGCCCCGCCACATGCCGCTCCCGGAATTGACCATATTCATCTGAATGGAAAATATTGCCGGAAGGTTAATCTCATCTTCCAGCGTGACTCCCTCCACCGCCGCGGCCAGCTCTGCGGACAGCTTGCTTCCATTCAGCTCAACCTTATAATTCGCTACACTGGTGCCCATGCAATCCCCGCCTTAATCCGGGATGACCAAGGTTCTCCCGATATCGTTTTTTCCAGGAAAGCCGATTGGATTGACAATCTTGTTCAGCTCGGCAATCCTGCGCCACGCCAGCGGCTCCTTCAGCGCTTCATTTGCGATCAGATCCAGCCGGTCCCCGCTTTTGACTACCCACAGCTTCCGGCAGGCATTCAGACCCCGGTTGTCTTCGACGGTTTTGTCCGACTCTTCCGTGATGAAGGTAACATCGAGCAGAGAGCGGACCGGCGTGCCGTTCTCCATAAACATCGTGAACTTCTGCTCGATCTTGCTGAGAAGGCCGCGGTAGGTAAATCCTCCCCAGACAAACAGGCACACCGGCGGTTTTTTCGTGTTTTTCCCGCTTACTTTGGGGTCAAGCAGCGAGGTTAGCAGCTTGGTCTTCTTGCGCACATCCGTGCGCTTCTCATAAGTGTCATAGAATAAAGAAACCTTGAGTTCAGGGGTTTCCGTGATTTGAAATTGCTTGTTGTTCTTCTCCCCGGTATATTTCCCTTCGAAGGAAACGGTGTACTCATTGGGGTTGAACATCACCTCAATGGCGCCAACGGGCATATCCAGAGGAATAATCTTTGCTTTTTCCGCCATTATCTAAGCCCCCTCCGATCCTTGCGGATCGCCATTTTCTTTTCGAGCACCTGATAGACCCGTTCAGCCAGCTGATTCAGCTCCGCAGTATCCATTTTTGCAGCAGGGGCCGCTGCCTTGGGGAAAGACTGGGATGGAGGCGGTGCAGACCGTTCCTGAAAAATCGGCTCCGGCCACTGCTGAACCGGCTCCGGCCGTGCAGCCTTGGGTGCTGCAGGTTTCCGCAGAATAAGGCTGCTGTATCTGCCTGCGGGCTGAAGGAATTCTTCCTGCTCAGGCCCGGCTGTGATAAGCCTGCCTCCGGGACCTCTTCCCAGCGGAGCCGAAGGCACCGCTTGCCCCTTGGCTGTGTGGATCAAGCCATTCTGTGGTGCAACTGAAAGTAAGCTCCCTGTATGTGCTGGCCGCGAAGCGCTGCTTAACCGCGCGGAAGAATACCGCTGAACCATCGGCTGGAGTTCTGTCGGAACCGCAAGAAGCTGAAGGGGCATGACATCAGGCTGCTGCAGCCTATTATCCACTGCAGCAGGCTCAGCAAGCAGCGGGTTCAGATGTTCAGATCGGCTCTTAAGCTCATCCAGCGCAGCCGCCAGTCGCTGACCTAAGCCCAGGTGAAGATTGGGGCTTATTAAAGGCCGGGAGCCTTGACTTGGCCTGAAGGATGGATCGTTAAGCTGTGCTTCCGCAGCTGTCCCGGCTGAGCCTGAGACGGCCCCGCGATGGCTCAACAGCGCCATTGTTGGCGGCCCGGCCTGCTCATACCGGTTCGCCGCCGGTTCAAGCTTTTGCCTCAAAGGCTGCTCAATGCTTACTGTGTCAGCGCTTTGATGCAGGATGTAGGTCCGCAGCGTCTGCAGCTGGCCATGGGCTGCGGGCAAATGCTGAGGTGCCCTGCCAGTAAGGGATTCCCCCTGCCGGGAGTCTCCGGAATACGGCACAAGCGGGCTTCCAATGCGCAGCCCTGTCAGATCCGTTCCATCCGGTGCCGCTGCCGGCATTGGCGGAAGGTACGTCAACGGCGTATCACCAGTCCGTTCCTGATTACTCACAGCTACCTGAATGGTTACGGGCTCTACTGCACTTTCAGCTGGATCAAGTGTGCGATATCCCCTTGTTACAAGACGTCCGGTGTTTTTCTGCTTCCACACTCTCTCCTGTAAGCCATGGATGAGGTTCTGGCTCCCGGCTGTTCTCAGATAGGAGGCAGGACTGCCGGTTCCATCTCTACCGCTGCCCTGAATGGTGTGCTGCCTACGGTTTACTGTCCCCGGACCCGTCATAACCTGCGTTTTGGGAGGATCAATGTAATGATGAATATGCATTTCCTTAACAGGATGTATGTTATGAATAACCGTATCAGCAGGCTTGACTGCTTCCGGCTCCGCGGACAGCAAATGAGATTGCCGCAGGATCAAGCTCTGAAACCGGCTCCGCCATCGGGTCATGCCGTACTTCCCCAGAATGGCCTGGACGAAATCCATTTGCTTGCTCCCGATCATTACCGGTACCTGTACAGCCCGTTATGGGTCAGGACCAGACTTTCCACTGCCACCGCACTGCTGCTGGCGCTGAATACCGGTCCTTCCCACTTGATGGGACAAGCCTCGATAAAGTTCCACCACACCTTTGGCGTGCCGGAATGATCCAGCAGGCAGATGGATCCGCTGCGCCGTTTGACCACTCCATTGACCACATTTTGATACCAGTTCCACAGATATTCGTCGTTCGTGACCCCGTTTTTTAGCGTCAGATCTGCGTATTTGGTCTGTCCGAGGAACACAAATTCCTTATGATTTTCCCCGCCGAACGTTTTGCGTTCCACCTGGGTCTCAATACTAAGACCGGAAACCTCGGAGAACCCGGCGACGGATATCCCGTCAATCTCCACAATGAAGTTAAAGGCAAGATAGGGATCTTCCCTGTAACCGGGCACCCAATTGCTTTTCGCACCGATATTTAAAATATTTGCCTTCAT

Protein sequences of DBSCAN-SWA_6

>NZ_CP048429|6325254:6356377|6351605_6352001_-|WP_062521868.1|DBSCAN-SWA
MGQPAAKKGDRILATDTHIVMLPAGPAPVPTPLPHPFTGILDGALSANVKIMGQPAATVDSTATNTPAHVPQGGPFQKPPTNQGKIIAGSASVKINGKMAARHSDPALTCNDSADLPVGKVVAAGTVLIGG
>NZ_CP048429|6325254:6356377|6336375_6336711_-|WP_062521883.1|DBSCAN-SWA
MRGKSTFELATDRQNGEMRGKSTFELGAGRQNGEMRGKSTFELGAGRQNGEMRGKSTFELGAGRKNREMRGKSTFDLDAGRQNGEMRGKSTFELGAGRQNSYVRRRTAGCP
>NZ_CP048429|6325254:6356377|6342812_6342995_-|WP_062521879.1|DBSCAN-SWA
MKEQLEARMKELKAELESGRQMMQELDEKRSNLGYAMTRISGAIQVLEELSAGEEESVQD
>NZ_CP048429|6325254:6356377|6334212_6334821_-|WP_062521888.1|DBSCAN-SWA
MEKAADLRVIRTKKLIDEAFLSLVDEKGLEGVNVRSLTSKAGINRGTFYLHYQDIYDLMEKMEDQIIEEMNALPAQSIPEQLLGSGSTEEPFPSIVEFIRFMNARHRFFAVFFAQEGTSFGKRLRTLIHSRMYEKLPRQAMNPDALAVPDDYIVAYFSSAHFGVIRHWFESGRTLPPEQVALILTRLVRDGPLLTALNRRPE
>NZ_CP048429|6325254:6356377|6327568_6328150_+|WP_062521901.1|DBSCAN-SWA
MNIASFIIYCIVVTFTPGPTNIVILSSVQHHGARKTMEYVWGATIAFGLLLAASALLNHVLAGIIPNILDIMQIVGSLYMLYLAYQIYRMGRAEAAPMQTASFASGLFMQLVNPKVLLFTLTVIPSYVLPYYSSFSGSFLFVLLITVIGFLAFVTWVVCGAVFKNLLQQHHRLFNTLMALFLLYSAVMVSGIL
>NZ_CP048429|6325254:6356377|6352734_6353778_-|WP_074648218.1|DBSCAN-SWA
MGTSVANYKVELNGSKLSAELAAAVEGVTLEDEINLPAIFSIQMNMVNSGSGMWRGTDLKSIKPGDKVKLSLGLDKLQPMISGEITALDLNFAEHSVLDIRGYDLLHRLRMGTRSKAFLKKKDSDIASEIAKEHGLTPVVDDTGTVYPYIFQNNQSNYEFLLERAAMLDYELYVDDKKLYFVKSRSVKAPGLPEMSFKKDFERLNLELRALTRGSKVKVKGWDVKEKKALEAEAKTGDETTKMGGTESGFSLSAKAIEESPIAIMAEHLLDMSEAKTLASAAYNSRLRDFIAGEGMCWGNPLLRAGQTVKLLGLGDRFSGIYYIVSTVHKIDSKGYTTTFKVKRTGL
>NZ_CP048429|6325254:6356377|6332575_6334042_-|WP_062521891.1|DBSCAN-SWA
MSTSNKPTPIQKGPLLFVMILGAFIAVLNQTLMSVATPELMGDFQISAATAQWLTTGYMLVNGVFIPVTAYFMQRFTTRELFLSAMLIFLGGSILAGAAPNFGLLLAGRLIQAAGAGIIMPLLMNVVLAIYPVEKRGGAMGMIGFAIIFAPAIGPTYAGYILDHYSWRSLFYVIIPFAALVVVLAWFYLKNVTERTRPKLDIWGLILSTLGFGTLLYGFSRAGSIGWSSAEVVATLASGVVLLILFTWRQLTSSNPLLELKAFKYNMFTLTTLINIAVTVVMYADMMLLPLYLQNMRGYSALDSGLLMLPGALLMGVMMPLAGRLFDRFGAKWLSIIGILITIFTTFGFIHLTDSTSYTYLLLMSTGRRLGMALFLMPITTAGLNQLPEAMNAHGTAIANTVKQVAGAIGTSLLVTVLTNRTQFHLADMTAAGVSGDPRHLLLEASISGMNDAYLAVIIFGGIGLVLSFFIKKTGNVEAGEQELVPVR
>NZ_CP048429|6325254:6356377|6331350_6332256_-|WP_062521893.1|DBSCAN-SWA
MTTILRTWELTKEYQGKEVVSGVNMNIKQGEIYGFLGPNGAGKTTVMKMITNLVKPTEGYIEFFGVSMTDHSYEMLKRMGCIIEYPVFYDKLTARENLQLHGEYMGYYNTKAMDEALELVKLEGVDKKPVKQFSLGMKQRLAIARAVMTKPELLILDEPINGLDPMGIKELREVFRMLSREYGMTLLISSHILGEIEQVADTIGMIRDGILLEEMAMDRIRSRNTQYIELITGASSKAVYVLEHKLGLTNYKVLDPRTIRIYDAVQQLELNKALVEAGVELDSLSKKNHSLEDHFVEQMGW
>NZ_CP048429|6325254:6356377|6326509_6327400_-|WP_062521903.1|DBSCAN-SWA
MNVIENMNDALSYIEDHLTEEIDFKEVTRRALCSEYHFKRMFSFLAGVPLSEYIRRRRLTIAAFELQQSRLRIIDVAVHVGYSSPDAFTKAFQLFHGVTPSEARAGSPSLKSFPRMTFQLTIRGGSEMNYRIEEKEAFRIVGLKKRVPIQFSGVNPEIAAMAQSLNLQMIAELKQLSNTNPAGIISASVNFSEGRMEEKGELDHYIGVATTLEGPEPFAQLEVAASTWAVFEAVGPFPDTLQNIWGRIYSEWFPSSNYELVEGPEMLWNESQDTTSPTYRSEIWIPVQASDLKTGI
>NZ_CP048429|6325254:6356377|6345893_6346643_-|WP_062521876.1|tail|DBSCAN-SWA
MSSQNDYSYVQYLPRVFQQKAGESDEQFFLGRFLKAFEAMLSGKTGAAGKESVGIEALLDGMHQYFDPGTAPAQFLPWLAGWVGLELAEGVEYDGEQDNRDCALAPMQILPLPAARSTVNRNLISSIVQLYKKRGTLDGLAEYLQVYAGEEAAIQIHDYEEPVRCGIGQRVGINTMVGAAEPSYFSVHVILPAYSRSILQNKVQILQEVIRKEKPFYTNSSLNIEVPKMCLGVYGRVGMETLLGGMTED
>NZ_CP048429|6325254:6356377|6347568_6351207_-|WP_062521872.1|plate|DBSCAN-SWA
MPNKVPTIDKRNQEQLVPELRRLIYQYCSREWTDLTELEADKKADALVHIFTQMMGKVIGRLNKAPEKNFISFLNLIGIHPTPPRSAKVPLLFKQKPDADTVSTIPAGTRVSAQPENQAEVVFETEKDLTVIQPRLVRAVSLDPQEDQWSNQDYLFAEEPSGQKAKLFRGDSTVVHRLYLGHSELLGFEEAGSRLSVYFNKPEAALAVAADTPGGTGGLPDMDWFCFDEEGNTVQLSPSMAGIKEDSAWRAVVQFDHLSGVHAKTIAGYEQAEHMREWSNKWIFAELKTPITAAALMPDIEDIRLELKLVSPVPLTPDMAVNNGTPLDMSKDYYPFGDKPKVNDTFYIACSEAFSKPGSRITLKIELSDPEISKLPDTPYVRLGWEYWNGKEWLGIGSLEETLDGEAAAAAGSTRSSACLTASGMLSFQCPGIKPLTLNGEERYWIRARITGGNYGEEAKYEYQDEEVKLGEGTIKVAQLKVTQATYAPPSIRRLSIAYSHTLEGHPQTVLTENNFSFADKTAACLAEGEYFKPFYPCAELEPTFYLGFDRDISDLPVSLFFPLTGEQLRRPVVAWEYWDGRRWLTLSVNDEIRGFTRREILQFAVPADIAKRPLFGTEQYWIRARLDEGRFEIFPQVDAIFANAVWARNSNSVAGEIPGSSNGEENQSFQLSKTPVLPGQSLRVREAPGQGEWVLWEEVDTFALSASDGRHYMLDRSSGTIIFGDGRNGMIPPTGTDNIECDYKYGGGAAGNVAAGAVTKIWDSFSWLDSVTNPVAADGGFDQEAAEQAQIRGPHTLKSWDRGVTAGDIEWLVREAMPQIAKVKCLSAMNRDLEFVPGTATIIVVPETDEPKPVPSQELLSEIEAYLCERISAALDTSDPGIEVIGPDYVRIGVEAAVAFTSAEQRKVAEGRIIDNLKQFFHPLNGGDGAAGWELGQNLYISEVYAVIKNTPGVDYVSSIAIKASVQCFTVSLEPLESGPYKPLAAYPKYSAVRSDDNSIQFALAERVEPGSEVKSLVLKGFKENGVIRLRYRTYEPVGLIVASIDGDILECQTLDGQPLERSYPEGSDLEYDITDDLTVRTYILNGLASGAVSFFVKIAVFEPKDIVFLSKTDEYVNTTPLKIHSIHSDNIFLEEDELIYGGTHLINKPEEHIFPYLLDKNTGLLHDLTGTTEDCRLAAILKENRKFLTGLGAAPGTAARCPYCFPEEQP
>NZ_CP048429|6325254:6356377|6325254_6326400_+|WP_062521905.1|holin|DBSCAN-SWA
MKTYDAFPEPIGSYTVGRTQMDVEYTASDHSKRELTAFVYYPSDSSEGKSTSTYMFPEVYEMFNEQPVNIQYLKAKDVFSIDIKTRCYDDLALSGKEKRYPVLFYVCGGGGSPEWGTVICTDLASTGYVVVSIGHQNSTMYKRKDGRLFNASKDFSHDLMAFSEDPERLALAGKMEMRPDDETATQMCRNMLTLPILAKFTEYSELQAEDVRYVADYLYKLDSGELNSIFKGRLLFDIGMGIVGHSFGGSTAAMVCRDDDRFACGIGLDSGAFGLQGSDLKKPFLLLFCEPNYNMNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNEEFRGERDAMEMRNLVTDYTKNFFDHYILQKAASVESLAYDGVDLIKKTGNK
>NZ_CP048429|6325254:6356377|6329109_6329670_-|WP_062521897.1|DBSCAN-SWA
MKLVKGLVVAGVAAALLSGCGNSNDKANEAASASPSASAAAETTDAQSSASIVNQADAFTKAVSAEGNWIVAILNDLTVDTDVVVAGEFHDKGKAENAIYRKLALYAQDADHKITASYTLTAPKVTVQSENFKVQGGTIKGDVYVEAKGFTLDKTATIDGNLYFKSDDLKTSAVLEGKVTGETAVK
>NZ_CP048429|6325254:6356377|6343013_6345506_-|WP_143013431.1|tail|DBSCAN-SWA
MDTDRNIERGQGEKIHIWERGRISHGTKKPDSSEHIVLARIVPRKDSNGIVIDSACIFDYDSDAARTPLRTYAGAAGKKMVTEKLIIKAKSDDSIDNMELNEETLAAMPSVYTLQEGKVLEVRAPETRFTGALNIAGDLTLQGELILQSKDKSQSEMRIMNSFVEVNSPNTDDPDYEFPGPRDGGLEVYRGDGGIHDARIVWVEADQCFKAGLGTDLKKIAYGNEWDSLIKNEFADLLHRHSRLSSPGGASVSFNSSGKLFSDADLALRDGTTLWLKGTNPDTIDSSHGLGWFGAGKPFAASEVDGPVLFGNSGGVLGTRTANGDGSRTDRPVLSWNKAGYVGIGPRKALEDSLDVDGSLRILSGRNPVRFTSAWSGFPDNQINGAEISNDITDHKALMIVGNQSAGQGRKVAIWDRLDVNGFLYVNGKMQAAQEIIPSAGKGEHNGIIFPANPGGGGADLAWIKYYPRIGEDCTLEIGTSNDANDHISLNASGNVGIGTLTPADKLDVAGELRVLSGKNPIRFTSAWSGFPDQAHNQAEISNDTTTYKSLMLIGNSSSPDGKRKVAVWDQLDVNGFLQVNGSARITGDLQITGSIKTDVFNFDGRFKKLDVADNFAAYVRCADFYIGYSGRRGAPGRALVDNGSHLVLNYGNDWSYASVHSSLEVKNALLPSAGSGNNGIIFPSDPGGGSGDSAWIKFYPTSGENCVLDIGVSNDAGDRIYLHASGGVYANGSMYWWSSRELKDNIADIPVKEAKQLLDGLNPVSFKYKGSTKERTLGFIAEEVPAVLADPDQRAISGMDIIAVLTSVMKDQQKAIARMQKQIATLQGA
>NZ_CP048429|6325254:6356377|6336961_6342775_-|WP_074648214.1|DBSCAN-SWA
MPKDMKRMNYFNGLLLKEEDLTLDQNYHKRARGLHNRYFHNWGVVTGLKVNPKELVKVEIDPGFALNRITDPDNNEETSQEILVSDTHPARVLDLSGYSTSDQIYISVSYKEELADADLLKGGGNKIHVWEKAEIKASSQKPKDVRKDILLGRVTLKHNQDGALSIDQIYDTDVDGTLLVTRAIGGETLKADKIIVGSKDDPDQPFLSNSVKEDGKEGNKLNVHAALTEFTGNLRTGAISSYGAMDVNGEFSVTAGSEQVFKVNDTGDVDMSGSVAVAGPFSAKSGIDVSGGMAILDVPQVMVGGNMVTLNKNASKENNSGFEIIRKDQPSAKLLWDEKSKGWMIGTDMKEGDAASGMFHVAYGAEWEQLHGGSLADSLHTHSQLHSADGKPALRTDKQGNVQIDQTLTVSGSLVSKQGGLEVFRGETLPNAKIAWNEATKSWQTGTANGDMTDIPDGKQWEELTGGTGNADALHTHRQFHNEDKSLLALEIGADGNVSIPHELMVGETLTVNKLIVREEEVVIKKVEQEVADSFLTVNKGENDAVLGSKGGLDVYRGIQNPNARMEWNEAERKWKIGLEGSMSDIPYGSKWDSLTNGSLADAAHKHSALSTPSGGTILSADDQGKVSASGSLEIGGTLKGKGNAELKADLNVGGSATIEGNLTVKGKTTYVDKVDMVVVSNRIELNKFEGNSSTLNQSSIDVYRGKLNPSARLVWSETDGRWKLGLGDELSNIAYGSNWDALTGGVSSDADGLHRHNSLSDSKGNTVIQATAKGDIEITNSAEVQGTLTVDNGADISGGLAVQGLLKVDGNLIVKGTTTTVEREDLVVTNNVIEINKFKGGTPPANESGIEVYRGESQPAARIIWNENERKWKVGIGSALENIASGSSWDKLTQMASADSLHIHSQIYNPQTDILALSASAEGDVDVHHDLSVGSNLTVAGNLEVRGTSASITTDELDIGSPWVTVNKDGDEVSSLSGGGLEIYRGLNQPAAKISWDETKDEWQLATPTEPAAMVVDTSGNVNVSGGLKAANASVLGAVTAASAAIAGTVTVGDGLEVLQGTETSAQIKWAKDRWKLGTAGKAVLSLTRSGKVGVGTDNPTEVLDVAGKAIFRTEAEIAGAATFSGKVTAHGEATFEEDAAFNKAIHAADLAVSKNAVVAGNVVAGGFEAPRGLDSSGQELPNARIFWNNVQKAWFYGDGVTLSEFGTGKGGQNKLYNALGDTIALFADSEGRVGIGTNTPLALMDVKIKGGLTAFSVTGAGNVGIGTYDPKSKLDVQGDTAVTGTLTAVNAVISKDLTVTGNLTVNGDTVTINAATLEVEDNIIRVNKYAPQATPVVKNAGLEVFRGGTALPAQLLWDETADEWQAGVPNALKAIEFKGHTHPEFAELSGAFTVDSGNIGIGTPSPAAKLDVNGNVAVSGKLTAVDAAASGTLTAKDAAVTGTLTAKDVAVNGTAAFKDAAVSGALTAKDAAVSGTLTAKDAAISGSLTLGQGIAVERGADPKAQILWDESTDTWQVGVAGSMKQLSYSGHTHPELTALTGVLKIASGNLGIGTATPTAKLDVNGNAIVSGKLTVVDTAISGTLTAKDASVSGSLTLSQGIEVGRGADPKAQILWNEALDEWQVGIAGSLKQLAYSGHTHQELADLTAVLKIASGNIGIGTSTPAAKLDVNGNAAVSGKLTVADAALSGTLTAKDAALTGVLTVKDATLSGTLTVLNAAVTAALTAKDAAVSNKLTVKDAVISGSLAVSQGIEVSRGTDKKARIAWDASNNVWQAGIEDNLQTLVCKDDVYDELIQVAGAVTVDSSSNVGIGKTPTDNYKLDVNGNLRATNFAQTSSRTFKENIASLPVKKALELLNRLKPVTFNYKAENAKKQNIGFIAEDVPQIFSTSDHKSVVLMDIIAVLTTVVQKQQKEAQDMRKQVNELQTQVTALAGA
>NZ_CP048429|6325254:6356377|6328169_6328943_+|WP_062521899.1|DBSCAN-SWA
MEKFNYAKSADILSLSASFTDFTYKKHCHEEYAIGVTLRGIQQYNLDGSFQASHKNGVMLFNREQYHDGSSYDREGIDYVMLYIKPDLFSEILGGQELRFTSPIVYDADLASCILSLDQSIRSGADDAWSSELLFKLGGLVSKTEIAAPRRKNNAFVQKAKEMMNSHIDQVLKLDDLCQEFGLSKYQFIREFKSHAGISPYQFFLNCKVERAKQAIERSRDIYAAVADYGFADLPHLNRHFKSMFGITAFEYMSQLS
>NZ_CP048429|6325254:6356377|6355900_6356377_-|WP_062521860.1|tail|DBSCAN-SWA
MKANILNIGAKSNWVPGYREDPYLAFNFIVEIDGISVAGFSEVSGLSIETQVERKTFGGENHKEFVFLGQTKYADLTLKNGVTNDEYLWNWYQNVVNGVVKRRSGSICLLDHSGTPKVWWNFIEACPIKWEGPVFSASSSAVAVESLVLTHNGLYRYR
>NZ_CP048429|6325254:6356377|6330587_6331196_-|WP_062522014.1|DBSCAN-SWA
MELKIGKTMVQSLWMAWEKVFALGSHFRGAGTSRFGICSVMLKKHRGQAIVCQDATVIHDGEWVGELHLDNGSILKLIQSEGSDRAALRTARMMRQSMRQINEAFESQSEFKQVKALMGITLLHRGITHGLGFEQQAMQPGLFRRMTTIYLRLLLSALHPEGKHRVSQHTEKLVPMLLIHSRASLKNRFSPGQKLSGEKISI
>NZ_CP048429|6325254:6356377|6354401_6355883_-|WP_143013427.1|DBSCAN-SWA
MDFVQAILGKYGMTRWRSRFQSLILRQSHLLSAEPEAVKPADTVIHNIHPVKEMHIHHYIDPPKTQVMTGPGTVNRRQHTIQGSGRDGTGSPASYLRTAGSQNLIHGLQERVWKQKNTGRLVTRGYRTLDPAESAVEPVTIQVAVSNQERTGDTPLTYLPPMPAAAPDGTDLTGLRIGSPLVPYSGDSRQGESLTGRAPQHLPAAHGQLQTLRTYILHQSADTVSIEQPLRQKLEPAANRYEQAGPPTMALLSHRGAVSGSAGTAAEAQLNDPSFRPSQGSRPLISPNLHLGLGQRLAAALDELKSRSEHLNPLLAEPAAVDNRLQQPDVMPLQLLAVPTELQPMVQRYSSARLSSASRPAHTGSLLSVAPQNGLIHTAKGQAVPSAPLGRGPGGRLITAGPEQEEFLQPAGRYSSLILRKPAAPKAARPEPVQQWPEPIFQERSAPPPSQSFPKAAAPAAKMDTAELNQLAERVYQVLEKKMAIRKDRRGLR
>NZ_CP048429|6325254:6356377|6329878_6330577_-|WP_062521895.1|DBSCAN-SWA
MLLHLTIGIISIFILYMLVPSLLTRLAGYGVMRRGTSPKEVAFTFDDGPHPEYTPRLLDLLAQYKVKATFFVLGAQAERYPELIKRMDREGHQIGIHNYIHTSNWLMLPGTIRRGHLERTADIVESIVGTRPDHYRPPWGLINIFDFLRLKQYRIVLWSLMAHDWSRKKCQTSLRSTLLNRIRDGSIIVLHDSGDTLGADGNAPHYMLQALEEVLNQLKTRNLKCVRLDEMA
>NZ_CP048429|6325254:6356377|6352015_6352738_-|WP_062521866.1|tail|DBSCAN-SWA
MNEGPGITNFADSMVNEGRIFGVMVGIVINNNSANHADKPGPGRVKVKIPLMGMAESNWARMASWMAGKERGAFCLPEVDDEVLVVFENGDVNRPYVIGSLWNGKDTPPETNKDGKNNIRMFKSRSGHILQFADTEGKENITLTSAKGHVIKLDDKSGAEQIQIMDQSGKNKIVIDSKGNKLSVLSGQDIEISAPGGKLSLSAKTIEMKSSADTRIEASAGMDVKAAASMTIKGATVNIN
>NZ_CP048429|6325254:6356377|6351206_6351602_-|WP_062521870.1|DBSCAN-SWA
MEVVDFLGRGWKYPFAVQRGNINSSDGEDSIRESILLILSTARGERVMRPDFGCRLNELVFSPNTMSTATLLRSFIEEALQNWEPRIEVDDITVTPRSDQSQLEVSIDYSIRASNSKYNLVYPFFLESVGK
>NZ_CP048429|6325254:6356377|6346639_6347512_-|WP_062521874.1|DBSCAN-SWA
MPLPVPNLDDLGFDELVADAKTLIPLYDPDWTNYNPSDPGITLIELFAWFSEMVLYRIDQVTEESQLQFLKLLGVTLAEEEELTSGIRRGVKQFSECYRAVTAADFQLLAKQSLLDIPGILDTYPDLAVRTLCLINTDMENGTGVNKEAFGHVSVVLILQTDNQKDLLREMTQIKQSVKAYLDARKLLTTRVHVVEPDYRDIVIEMVVSAKDKSIGSTVTGSITRFLDPVSGGEQGRGWLPGRKLYASDLYHLVEGISGIDHVTSVALDSPDLLPFQLFKLKDLKVEVES
>NZ_CP048429|6325254:6356377|6335997_6336243_-|WP_062521885.1|DBSCAN-SWA
MSKEYSRTYIESVKQELLSRLGLKQVYYKGQAGDDLLYEATGFYKKTQHRFCVRTRTGTVDEFVAGKWMKVRSFEIKSKEQ
>NZ_CP048429|6325254:6356377|6353790_6354402_-|WP_020433760.1|DBSCAN-SWA
MAEKAKIIPLDMPVGAIEVMFNPNEYTVSFEGKYTGEKNNKQFQITETPELKVSLFYDTYEKRTDVRKKTKLLTSLLDPKVSGKNTKKPPVCLFVWGGFTYRGLLSKIEQKFTMFMENGTPVRSLLDVTFITEESDKTVEDNRGLNACRKLWVVKSGDRLDLIANEALKEPLAWRRIAELNKIVNPIGFPGKNDIGRTLVIPD
>NZ_CP048429|6325254:6356377|6334962_6335790_+|WP_062521886.1|DBSCAN-SWA
MLNHKTAVITGASSGIGRAISSQLAGEGVHVFITGRSLGQLEKVKAQIEQAGGQATCSAFDLRDTGRLQDFIRQAQTQTGHLDIMVNNAGLHIHGNIVDTKVEDWREMIDVNIVALLAGSQAAVQAMRLNEGGAPGHIIHISSGNAYEPGRDFYSATKHMVNAIGQALTRELAQEPIQITTILPGAVATNFGRNLEPEAVVQLARKLGMEVDYKQGDHLPEELIARIRGAMGQTFLSGDDIARAVVYALQQPQNVVVRELYLTAPNVYLGNDFSM

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062521905.1|6325254_6326400_+|holin	choline esterase	NA	NA	NA	NA
WP_062521903.1|6326509_6327400_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_062521901.1|6327568_6328150_+	LysE family transporter	NA	NA	NA	NA
WP_062521899.1|6328169_6328943_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_062521897.1|6329109_6329670_-	hypothetical protein	NA	NA	NA	NA
WP_062521895.1|6329878_6330577_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_062522014.1|6330587_6331196_-	hypothetical protein	NA	NA	NA	NA
WP_062521893.1|6331350_6332256_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.7e-39	44.0
WP_062521891.1|6332575_6334042_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_062521888.1|6334212_6334821_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_062521886.1|6334962_6335790_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_062521885.1|6335997_6336243_-	hypothetical protein	NA	NA	NA	NA
WP_062521883.1|6336375_6336711_-	hypothetical protein	NA	NA	NA	NA
WP_074648214.1|6336961_6342775_-	hypothetical protein	NA	NA	NA	NA
WP_062521879.1|6342812_6342995_-	hypothetical protein	NA	NA	NA	NA
WP_143013431.1|6343013_6345506_-|tail	tail fiber domain-containing protein	NA	NA	NA	NA
WP_062521876.1|6345893_6346643_-|tail	phage tail protein	NA	NA	NA	NA
WP_062521874.1|6346639_6347512_-	hypothetical protein	NA	NA	NA	NA
WP_062521872.1|6347568_6351207_-|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_062521870.1|6351206_6351602_-	GPW/gp25 family protein	M4SKQ1	Cyanophage	1.2e-10	35.0
WP_062521868.1|6351605_6352001_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_062521866.1|6352015_6352738_-|tail	phage tail protein	NA	NA	NA	NA
WP_074648218.1|6352734_6353778_-	phage late control D family protein	NA	NA	NA	NA
WP_020433760.1|6353790_6354402_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_143013427.1|6354401_6355883_-	hypothetical protein	NA	NA	NA	NA
WP_062521860.1|6355900_6356377_-|tail	phage tail protein	NA	NA	NA	NA

Sequences of DBSCAN-SWA_7

Nucleotide sequences of DBSCAN-SWA_7

>NZ_CP048429|6636254:6645388|DBSCAN-SWA
TTTATTTCCCGGCGGCGCCTATCTGGAAAAGCGCCCGCAGCGCACTGCCAAGTGCCTGCAGCCAGTTGTCTGCCGGATAGGCGGCTGCTCCGGCCGGTTGGAATCTCTTCTCATAGGGCGACTGCTCCGGAGGCAGCTGGTCCGGCAAATAGACCGGAACCCGGCCGATCTCCTTGCCGCCGAGCTGCAGCACCAGCACACCCTTGATGCCAAAGCTGCTGCTTCGTGCCCCCTGCCCCTCTGCCTCCGGAGTGCCGGGGCTGAGCTCCAGCTTGGTCACAAGCCGCGCTTCCTCTCCCTGGCCAAGCGGATAGGCAAAAGTCCTGCCGGGGACGAAGTTATAGCCGCTGATGCCTTCACCGCGCTCGATAAGTGTCTTCAGCGGATAGTGATTGAAGCCGTAATCCAGCAGCGCGGCATGGTCATTCCAGTCATTTCCGTCATTCAGCGTAACGGCGACCAGCTGCTGGCCGCCCCGGGTGGCGGAGCTGACGAGGCAGCGCAGCGCTTTTTTGGTATACCCTGTCTTCACGCCATCCGCCCCTTCATACAGGCGCAGCATTTTATTTTTGTTCAGCCACTTATAGTCCCATGGCTCATACGGGTTATCTGCCGTTTTCACCCGGGTCTTCACAATCTGCTTGAATACCGGATTATGCATAGCATAGGCTGTAAGCACAGCCAGGTCATTGGCGCTGGAATAATGACCTTCCGCGTCCAGTCCATGGGGATTGGCAAAATGGGTGTGTTGCAGCCCCAGCTCCTCCGCCTTGGCATTCATCAGATAAACGAAGCCTTCTTCCGACCCGCCTACATGCTCAGCAATGGCTGTAGCCGCATCATTGCCTGAGCGCAGCATCAGCCCATAGAGCATATCCTCCAGCGGCATTTCTTCCCCTTGCTTCAGGTAGAGGGAGGAACCTTCCTTGGCAAAAGCATTTTTGCCGACCTTGACCTTAGACTGCAAATTACCGTTCTCTATAGCTACAAGCGCAGTCATGATCTTGGTCAGGCTGGCAATCAGCATAGGCTCGTCCCCGCGGCTGCTGTACAGAAGTCTCCCGGACTCTACATCAATCAGCGCGGCGGCCCGGGCATGGGTGGATATGGAACTGTTCTCGGCCCGGATCGAGGGCTGGGGAGCCACACACAGCTGCAGTACGCATAATGTTAGAATCAGCAGTACCTTAAGGTTTGATGTCTTCATGTTCATCCTCCGGCTTCTTATCTGTTCACTTGTGTTGTACAAGTGTATGCGGGGCAACGGGATGGTATGTCCATCTCTTCCGCCGCAAGCTTTATCATCACAAAAAGGGACACCGCCTGTTTGAGGCGGTATCCCCGTTGTCTGCCGCTGCATTCTTCAGGTAATACCCATAACGCTAATGAGTCGAGGAGTCTGAAGGGCCTGGGCTTTTACCCGGTTTTTCGGTAGCCGAAGCTACTACTTGCGAACCTACTGGTGTGCCATTCTGAGACGATGCTCCATTCTGAGACGACGCGTCATTCTGAGACGATGTGTTATTTGGGAACATGGTCTGAATTTTGTCGATGAGACCCGGAGTCGCATCAATAATTTTCTCGAACAGATGGGTCTGGTTATCCAGCGGCACAATGTGCACCCCTTCCTTGCCTACTACAAGAAATGCGATTGGCCGAATGGATACCCCGCCGCCGCTGCCGCCCCCGAACGGAAGCATTTTGACGCCGCTTCCAGTACCATTGATACCCGGGGCATCGTCTTCCACGCGGAAATCACTGCCGCCTGCGGCAAAGCCGAAGGCGACTTTACTGATCGGCAGAATCACACTGCCATCCGGAGTTTCTACCGGGTCGCCGACAATCGTATTGACGTCCACCATGCCTTTAATATTTTCCATAGCGGTCTGCATGAGACCTTGAATCGGGTGTTCTGACATCTAAGTACTCCTCCTCTGCTGTTTGAAAGATAAGGGAATTGCCTACTCTTGTACAGTCTGCTCATATATCGGGCATGATATGTACAGCACTCTAATAAAAAACACGGTGGAACTGAAGCTGCTGGCTGGTGCTCTGCCCAGATATAACCTTCGCAATTTCGCCTCACATAAAATCCGCTTAAGAGGCCAGAATGATGGCTAAGCAGATAAATGTGTATAAGGAGGCTGAGCTATGGATTTCGCAAAAATTTGGCAGGCGGATATGGAAGGCAACGGCTTGCTGCCTTTGATCAAGGGTGGGAGCGATACGCAAAAAGACCCCCAAAAGGGGTACGTGATCGTAGATATGAATCCGCTGTCCGGTGAGAAGGCCGGGGCGGGAAGCGGGAAGAATCAAATCACCGTATTCAATGAGGTCGTGATCCCTGACGGCAAGCGGTATACCTATGATCTGTTCAGAAAGCTGAAGAATAATTACGAATCGGTGTCCGGCGGGAGAGATGCGGTTACGGCTGCAGAACATGAGCAAATTCATGAATTTCTGGCCTATGCCGCAGTGTCGGCACCTTTACGCCAGGCCCGCAAGTATGCCGAGGATCACCATCAGATCAAAGCCGGATGTTCCAAAGAAGAATGGGTCGAGACGCTTAGATCGATCTGGTTCCAGCCCAGTGCTGACGGCACCTCATTTTTTGAGCATGTTTTTATTGGAGAACAGGGCAGCAAATGGGGCGGACATCAATTTTGGTACAACTACCATTTGAATGAGGGACCTAATGAATCCCTTCAGAAAGAGGATTCTATCGTCGTTATCAAGGGTGCCGAGGTCGGCCGGACTGAAAAAAGCAACCTGGCCGAGGTCATCACCATAAAATATACACTTGAAGCAACCAAAAACAACGGGGACAAACAGACCCTGAGCAACGATATTGGCGGATTGTTTGTAGGGATCAGTGCGGAAGGGCTGTTGGCCCTGGGAACGGTGGCGTATCTGGATGGCCGGGCCCGGATCCCGATGGAGCTTAACGGAGCAGCCATTGATCTCATCATGCACAAAACGGGGGACCGCGAAAAAAATCCGCATAGCTTCTACCCTCAAATGAAGACACCTGTTCACGCTTAGTGTCCGGAACAATCCCTGAAAAATTCCCTGGCAGCCCGCACTCTCTGCGGCGCTGCCTTTTGGTTCAACACTGCCGCAGCCGGTTTAATCCGCCTCCTTCTGCGGAGAAACCGTGGGATTGCGGCTAAGGAGCGCTTTCCAGTGCCGCAGCCCCCCCTGTACCTTGGAGGCCCGCCGCAAAAGTCGAAGCCCTGAATAAAAGGCATAGCCCATTGAAAGCTTACCAACGCATACTGCCTCCGTGGAGAAGGATATCTCATCTGAGAACACAGGCGCAACAAACATCCGCGGAGATTTTTTCAGCCGGACGAACCTCGATATCCACCCTGCCAGAGTCCATTTCAGTCCCCAGAACGCTCCCGCTGCCGTTGCCGTATATGCCGCATCGCCCATCGAGAAATCGGTAGACCAATCCAGCTTGGTAATCTCGACATGGGACATTGTATCCTTCAGCCATTTGTTCAGACCATGCGTTGCCTTCACCGCTATGCGGATATTCTTCAGCCAATCGGCAACCGACTGCTTGTCGATTTGCTCCTCAAGATCTTGATCCGTCCGCACCGGTGCAAGGCCGCTTTCTTCCAGCTTGACTTTGATCCCCTTCTCTATTCCCTGGAACACGAGCGCAGGCAGCTCATAGTGAAATTTGACCAAGCCAAATAGGGCTCTCAGATCTAATTCTATCCGGTCATCCTTTCCCAGCCTGCACACCCGGAAATGAAAATGTATGTATGAAGTCAGAATCACTAGCAGCACTACAATCATTAACAGCAGCAGCGCCAAGGGTATTGCCAGCCATAACGTCACGAAAGTAACCTCCATGCAACCCATAATGAGGAGCCTGTGAATTAGTATGGCATTCAGGGCTGGAAAAAATTCCGCACTCAAGCAAAAAAGCCCCATAGCCTCATCCACAATGCCTGCGGCATTTAGGTGAATGGCTATAGAGCTTCTGTTAGTATCCGTCCGGCTGATTACGCCGGCTCCGTGTCATCAAAGGTCATCTGGCTGTCCAGCTTGCTGAACAGGAGCTGTGTCTCCTCTTCCAGGTCGTCGGAGGAGGCGTCGAAGTTGGAAGGCTCCGGCAGCTCCTTCAAATCGGCCAGCCCGAAACTCTCAAGGAACGATTTGGTGGTTCCGTACAGAATGGGGCGGCCTACTGCTTCCGCACGCCCGACTTCATGAATCAAATCCTTGTTGTTCAGTGTATGAATGGCCCGCTCAGACTTCACGCCGCGGATCTCCTCAATCTCCACACGGGTAATCGGCTGGCGGTAAGCGACGATAGCCAGTGTCTCCAGCGCTGCCTGGGACAGGGATGCACGTGAAGGTGAATAAGCGAGCCTTTCGAAATAAGGCGCATGGTCCGGCAGCGTAGCCAGACGGTAGTTCCCGGCTATCTGCACGACCTGCAGGCCTCGTTCCTGGGACACATAATCCTCTTTCAGTTCCTGCAGCGCTTTGCCGGCAATATCCGGCCGCTGCTCCGTAATCTCGGCAATCTGGCGGACAGACAGGCCCTCATCGCCGGACAGGAACAGCAGGCCTTCAATAATTGATTTCAGCGTTTTGAATTCCACTGAGATCTTCTCCTCCTCTCCACTCCATTACAATGTCATCAAATAATTTCTCTTGGTAGCAGAAGATCGCCTTCATCTTCATGAGCTCCAGGATGGCAAGGAAGGTCACCACGATCTCATGCCGGGCCATCTCATCATCCAGCAGCGCTGAGAAGCGCATTCTGCCGCCTGTCCCTTTACGCTGGAGTGCAGCCGATACATCCCGTATCCTGTCCTTTACGGAAATTTCATCCCGGGTAATCCGCTGATAGGAGGATCTTCTAGCCGCTTTGCTCAGCGCCTTCCGGAAGGCGGCGATCAGGTCGGCAGTATGCAGCCCCTTGAGCGTATTATCGATCTGGGCCGGCACAAAAGGACCCAGATCCTCCGGCTCCTTGGTGAAGATCAGGCTGCGTTCACTCTCCATATCCAGCAGCTGCACGGCAATGCTCTTGAATTTGCGGTATTCGATCAGCCGCTGAACCAGCTCTGCACGCGGATCATAATCGTCGTCCTCGTAATATTCGAAATCCTCGATTTCAATAACCGGCGGCTTCGGCAGCAGCAGCTTGCTCTTGATCGACAGCAGCGTTGCAGCCATCACTAAAAATTCACTGGTGATATCCAGCTCAAGCTCCTGCATCGTCCGCAGATATTCCATGTACTGCTCGGTGATCTCGCTGACCGGAATGTCCTGGATGTCGATTTCCGCCTTGTCTATTAAGTGCAAGAGCAAATCGAGCGGACCTTCGAACGTCTCCAGCTTGTACAATACAGTCACGCGGTTTCCTCCCGCCAAAAAAAAGTAAAGTGCAGCGCCGCACGGGCGCTACACAAGTAGAAAGATCTTATGGTTCATGCTTTCTTCTCATACATATAAATAAGCACGATTTCAGTAGATTCGTCAAGAGGTCTCTTATTTAAAAAGCTTGTTCAGGTTCGCCATTTCTATGGCAGAGGTCGCAGCATCCCAGCCTTTATTGCCGGCCTTGGTTCCGGAGCGCTCAATGGCCTGCTCAATATTTTCGGTAGTCACTACGCCAAAAATGGTTGGAATACCGGTCTTCAGATTGATGGCCGCCACCCCTTTGGCAACCTCATTGCACACATAATCATAATGGGTTGTAGATCCGCGAATGACGGTTCCCAGCGCGATTACCGCATCGTATCTGCCGCTTTCCGCCATTTTCTGGGCAATCAGAGGAATTTCGAACACTCCCGGCACCCAGGCCACATCCACTTCATCATCAGCTACACCATGGCGCTTGAACGCATCGAGCGCACCGGACAGCAGCTTGCTGGTGATAAACTCATTAAAACGCCCTACAACTACCCCGTATTTCAGTCCCTCGGATACTAAATGTCCTTCTAAATAATTCGGCATTGTATTCATCTACCCTTCATTAGTAAGTGATATGGATGTTACAGCTTGGAATCCTCATTTTGCTCAATGTTGTCAAAAGTCAGCAGATGGCCCAGCTTGGCCTGCTTGGTGTGGAGATATTTGGTATTGTCCTTGTTCTCCGGCATTTGAATCGGCACACGCTCCACAACTTCGAGACCGTAGCCTTCCAGTCCTTTGATCTTGCGCGGATTGTTGGTCATCAGCTTGATCTGGCGTACCCCCAGATCCTTAAGAATCTGAGCACCAATGCCATAATCGCGCAGGTCTGCCGGGAAGCCCAGCTTCAGGTTGGCATCGACCGTATCCAGACCTTCCTCTTGAAGCTTGTAAGCGCGGAGCTTGTTGATCAGGCCGATGCCTCTGCCCTCCTGGCGCATATACAGCAGAACTCCCCGGCCTGCCGCTTCGATCTGGCGCAGCGCCGCTTCAAACTGCGGGCCGCAGTCGCAGCGGTGGGAGTGGAATACATCGCCGGTGAGGCATTCGGAATGCACACGGACCAGCACCGGCTCTTCACCGGAAATATCGCCTTTGACCAAAGCGACATGCTCTTTGTCATCCACTTCATTCGTATAGGCGATCGTCTGAAAGTCGCCGAAGTCCGTCGGCAAATTGACCGAAACCTCACGGGTGACCAGCTGCTCCTTCTCATTGCGGTAATGAATGAGATCCTTAATGCTGATCAGCTTAAGCTCATGCTTGCGCGCAATCTCCACCAGATCCGGCAGACGGGCCATGGTCCCGTCTTCCTTGACCACTTCGCAGATTACACTGGCAGGATAAGCGCCGCACATGCGGGCCAGGTCCACAGCAGCTTCCGTATGACCGGAGCGGCGCAGCACACCGCCTTTTTTGGCAATCAGCGGGAACATATGCCCCGGTCTGCGGAAATCGGAGGGCTTGGCGTCCGGGTCCATCAGCGCTTGAATGGTTTTGGATCTTTCTGCGGCTGAGATCCCTGTGGTGGTATCTTTGTGATCGACGGATACGGTAAAAGCAGTGCCATGGTTGTCGGTATTATGGGCAACCATAGGCTGCAGATCCAGTTCTGCCGCCCGCTCTGCCGTAATCGGCACACAGACCAGTCCGCGCCCCTCTGTAATCATGAAGTTAATCACTTCCGGTGTGGAGCGTTCGGCAAGTGCAATGAAGTCCCCTTCATTTTCGCGGTCTTCATCATCCACTACGATAATGACCTTGCCGCGCATCAGATCATAAATGGCGTCCTCAATCGGGTCCAGGACACTGTCGTTCTTGATTGGCTGGCTCATCTTTCTAACCTCCTGGCAGCTTGACGCACCCTTAACAGGGCTTAGGCGCAAGCCTGCTCATTATTTATACAAACCCGTTCGCCGCCAGAAAATCACGGCTGATCCGGGAGCTGTTCTCTTCTTCCGCATTCCCTGCACGTGAACCGTAGTTAAGGAGATGGTCCACATACTTGCCCAGCACATCGCATTCCAGATTGATCCGGTCCCCGGTCCGTTTATGGGCCAGGACCGTTTCACCGAGCGTATGGGGAATGATGGATACGGTAAAGGTAGAAGCTGAAGCGTCGACCACGGTCAGGCTGATGCCGTCAATGGTAATGGAGCCTTTGGGAATAATGAATTTGAACAATGATGTACGCTCCGGAGCAATCTCGAAGACGACCGCGTTCTGGTCGCGCTTGACGCTGCGGATTTCACCGGTTCCGTCGACATGGCCCTGCACAATATGTCCGCCAAAACGGCCGCCGGCCGCCATGGCCCGCTCCAGGTTCATTCTGCTTCCGCTGCGCAGCTCCTTCAGTGTGCTGTTCCGGTAAGTCTGAGGCATGACATCAACGGTAAAAGAGTGATCGCCGATGGAAGTCGCCGTCAGACAGACGCCGTTCACCGATACGCTGTCGCCGATTTTCAAGTCATCCATAATGAGGGATGCGCCGATGTTCAGCACCATCATTTCGCCTCCGCCGGTCACCCCGCGCAGCACTCCGACCTCTTCAATCAAACCTGTGAACATGTGATTCGCCTCCTGATATTTGCTTTAGCGGATAGGCGTGCCGCTGATACACACATTATCCCCGAGCACTTCCACTTCCAATCCTTCAAGTGTAATCGCGCTTTGCATCAGCTCTACACCGGGAAATTCGAAGGTTCCGGGTGCAGCTGAACCACCCCCGACGATCTTCGGAGCAAAGAAAAGCACCACACGGTCCACAAGACCGTTCTCCAGCATGGCACCGTTCAGGGTTCCGCCGCCTTCCAGCAGGATCGAACCGATCTCCAGCCCGCCAAGACTGGTCATCGCTGCCTTGAGATCCACCCGCGGCCCGGCGCCGCTGACAACGATCTGCACCCCTGCATCGAGCAGTGCCGCCCGCTTCACAGGATCAGAAGATTCGGTAGTGACGACAATGGTGGGTGCCTGGCCATCACGGACGACAGCAGAATCAAACGGAATCCGCAGCGTCGAGTCAATCACGATCCGGACCGGATTCAGTCCAGGTACTTCCATCCTTGTGGTCAAAGAAGGATTGTCGGCAATCACGGTATTGACGCCAACCATAATTCCTTGGTGGCGGTGCCGCAGCGTGTGCACGATCTCCCGCGCCTGTCCATTGGATATCCATTTGCTGTCCCCGGTCCGGGTGGCCAGCTTCCCGTCAAGCGTACTTGCGCTCTTCAGCGTGACAAAAGGCTGCTTGGTCAGGATATACTTGATGAATTTCTCGTTCAGCCGCAGAGCCCGGCTTCGGAGCAGCCCTACCTCAACCTCAATTCCCTGCTCCCGCAGCATGGCTATGCCGCGCCCGGCAACCTGGGGATTGGGGTCCTCGCAGGCCACCACCACACGGGCAACCCCTTCATCGATCAGCCTCTGGCTGCAGGGCGGCGTCTTGCCATAGTGACTGCAGGGCTCAAGAGTTACATAAGCCGTGCTCCCTTGCGCCTTGCCCGCCGCCATATTCAGCGCGTGCACTTCGGCATGGCCCGTCCCCCGCTGCAGATGGGTGCCGAGGCCAATCATGGCTCCATCCTTCACGACAACACAGCCGACTACCGGATTAATGCCGGTCTGGCCTTGCGCTCTTTCCGCCATATCCAGTGCGAGTGACATATAAAATTCGTCATTCATTGTATCCAT

Protein sequences of DBSCAN-SWA_7

>NZ_CP048429|6636254:6645388|6644287_6645388_-|WP_062522267.1|DBSCAN-SWA
MDTMNDEFYMSLALDMAERAQGQTGINPVVGCVVVKDGAMIGLGTHLQRGTGHAEVHALNMAAGKAQGSTAYVTLEPCSHYGKTPPCSQRLIDEGVARVVVACEDPNPQVAGRGIAMLREQGIEVEVGLLRSRALRLNEKFIKYILTKQPFVTLKSASTLDGKLATRTGDSKWISNGQAREIVHTLRHRHQGIMVGVNTVIADNPSLTTRMEVPGLNPVRIVIDSTLRIPFDSAVVRDGQAPTIVVTTESSDPVKRAALLDAGVQIVVSGAGPRVDLKAAMTSLGGLEIGSILLEGGGTLNGAMLENGLVDRVVLFFAPKIVGGGSAAPGTFEFPGVELMQSAITLEGLEVEVLGDNVCISGTPIR
>NZ_CP048429|6636254:6645388|6636254_6637466_-|WP_074648344.1|DBSCAN-SWA
MNMKTSNLKVLLILTLCVLQLCVAPQPSIRAENSSISTHARAAALIDVESGRLLYSSRGDEPMLIASLTKIMTALVAIENGNLQSKVKVGKNAFAKEGSSLYLKQGEEMPLEDMLYGLMLRSGNDAATAIAEHVGGSEEGFVYLMNAKAEELGLQHTHFANPHGLDAEGHYSSANDLAVLTAYAMHNPVFKQIVKTRVKTADNPYEPWDYKWLNKNKMLRLYEGADGVKTGYTKKALRCLVSSATRGGQQLVAVTLNDGNDWNDHAALLDYGFNHYPLKTLIERGEGISGYNFVPGRTFAYPLGQGEEARLVTKLELSPGTPEAEGQGARSSSFGIKGVLVLQLGGKEIGRVPVYLPDQLPPEQSPYEKRFQPAGAAAYPADNWLQALGSALRALFQIGAAGK
>NZ_CP048429|6636254:6645388|6641770_6642238_-|WP_025706959.1|DBSCAN-SWA
MPNYLEGHLVSEGLKYGVVVGRFNEFITSKLLSGALDAFKRHGVADDEVDVAWVPGVFEIPLIAQKMAESGRYDAVIALGTVIRGSTTHYDYVCNEVAKGVAAINLKTGIPTIFGVVTTENIEQAIERSGTKAGNKGWDAATSAIEMANLNKLFK
>NZ_CP048429|6636254:6645388|6639379_6640102_-|WP_062522275.1|DBSCAN-SWA
MTLWLAIPLALLLLMIVVLLVILTSYIHFHFRVCRLGKDDRIELDLRALFGLVKFHYELPALVFQGIEKGIKVKLEESGLAPVRTDQDLEEQIDKQSVADWLKNIRIAVKATHGLNKWLKDTMSHVEITKLDWSTDFSMGDAAYTATAAGAFWGLKWTLAGWISRFVRLKKSPRMFVAPVFSDEISFSTEAVCVGKLSMGYAFYSGLRLLRRASKVQGGLRHWKALLSRNPTVSPQKEAD
>NZ_CP048429|6636254:6645388|6643594_6644263_-|WP_062522269.1|DBSCAN-SWA
MFTGLIEEVGVLRGVTGGGEMMVLNIGASLIMDDLKIGDSVSVNGVCLTATSIGDHSFTVDVMPQTYRNSTLKELRSGSRMNLERAMAAGGRFGGHIVQGHVDGTGEIRSVKRDQNAVVFEIAPERTSLFKFIIPKGSITIDGISLTVVDASASTFTVSIIPHTLGETVLAHKRTGDRINLECDVLGKYVDHLLNYGSRAGNAEEENSSRISRDFLAANGFV
>NZ_CP048429|6636254:6645388|6640843_6641635_-|WP_039836118.1|DBSCAN-SWA
MTVLYKLETFEGPLDLLLHLIDKAEIDIQDIPVSEITEQYMEYLRTMQELELDITSEFLVMAATLLSIKSKLLLPKPPVIEIEDFEYYEDDDYDPRAELVQRLIEYRKFKSIAVQLLDMESERSLIFTKEPEDLGPFVPAQIDNTLKGLHTADLIAAFRKALSKAARRSSYQRITRDEISVKDRIRDVSAALQRKGTGGRMRFSALLDDEMARHEIVVTFLAILELMKMKAIFCYQEKLFDDIVMEWRGGEDLSGIQNAEINY
>NZ_CP048429|6636254:6645388|6637635_6638172_-|WP_062522279.1|DBSCAN-SWA
MSEHPIQGLMQTAMENIKGMVDVNTIVGDPVETPDGSVILPISKVAFGFAAGGSDFRVEDDAPGINGTGSGVKMLPFGGGSGGGVSIRPIAFLVVGKEGVHIVPLDNQTHLFEKIIDATPGLIDKIQTMFPNNTSSQNDASSQNGASSQNGTPVGSQVVASATEKPGKSPGPSDSSTH
>NZ_CP048429|6636254:6645388|6638404_6639295_+|WP_062522277.1|DBSCAN-SWA
MDFAKIWQADMEGNGLLPLIKGGSDTQKDPQKGYVIVDMNPLSGEKAGAGSGKNQITVFNEVVIPDGKRYTYDLFRKLKNNYESVSGGRDAVTAAEHEQIHEFLAYAAVSAPLRQARKYAEDHHQIKAGCSKEEWVETLRSIWFQPSADGTSFFEHVFIGEQGSKWGGHQFWYNYHLNEGPNESLQKEDSIVVIKGAEVGRTEKSNLAEVITIKYTLEATKNNGDKQTLSNDIGGLFVGISAEGLLALGTVAYLDGRARIPMELNGAAIDLIMHKTGDREKNPHSFYPQMKTPVHA
>NZ_CP048429|6636254:6645388|6640269_6640875_-|WP_062522273.1|DBSCAN-SWA
MEFKTLKSIIEGLLFLSGDEGLSVRQIAEITEQRPDIAGKALQELKEDYVSQERGLQVVQIAGNYRLATLPDHAPYFERLAYSPSRASLSQAALETLAIVAYRQPITRVEIEEIRGVKSERAIHTLNNKDLIHEVGRAEAVGRPILYGTTKSFLESFGLADLKELPEPSNFDASSDDLEEETQLLFSKLDSQMTFDDTEPA
>NZ_CP048429|6636254:6645388|6642276_6643530_-|WP_062522271.1|DBSCAN-SWA
MSQPIKNDSVLDPIEDAIYDLMRGKVIIVVDDEDRENEGDFIALAERSTPEVINFMITEGRGLVCVPITAERAAELDLQPMVAHNTDNHGTAFTVSVDHKDTTTGISAAERSKTIQALMDPDAKPSDFRRPGHMFPLIAKKGGVLRRSGHTEAAVDLARMCGAYPASVICEVVKEDGTMARLPDLVEIARKHELKLISIKDLIHYRNEKEQLVTREVSVNLPTDFGDFQTIAYTNEVDDKEHVALVKGDISGEEPVLVRVHSECLTGDVFHSHRCDCGPQFEAALRQIEAAGRGVLLYMRQEGRGIGLINKLRAYKLQEEGLDTVDANLKLGFPADLRDYGIGAQILKDLGVRQIKLMTNNPRKIKGLEGYGLEVVERVPIQMPENKDNTKYLHTKQAKLGHLLTFDNIEQNEDSKL

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074648344.1|6636254_6637466_-	D-alanyl-D-alanine carboxypeptidase	A0A1P8VVG5	Erythrobacter_phage	3.7e-07	33.3
WP_062522279.1|6637635_6638172_-	sporulation protein YtfJ	NA	NA	NA	NA
WP_062522277.1|6638404_6639295_+	hypothetical protein	NA	NA	NA	NA
WP_062522275.1|6639379_6640102_-	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_062522273.1|6640269_6640875_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	5.4e-15	30.3
WP_039836118.1|6640843_6641635_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	4.9e-08	36.9
WP_025706959.1|6641770_6642238_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	8.0e-43	57.3
WP_062522271.1|6642276_6643530_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.9e-115	52.9
WP_062522269.1|6643594_6644263_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	5.0e-38	40.3
WP_062522267.1|6644287_6645388_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.5e-55	36.4