CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048598	Klebsiella aerogenes strain AUH-KAM-9 chromosome, complete genome	4 crisprs	DEDDh,csa3,cas3,RT,WYL,DinG	2	2	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048598_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048598_1

991954-992068

Orphan

Consensus_repeat	Method
GTTGGGTAGCCCGGATAAGGCGTAACCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048598_1

>merge|NZ_CP048598|1|991954-992068|CRISPRCasFinder
GTTGGGTAGCCCGGATAAGGCGTAACCGCCATCCGGGAAGGTTTCCCCGGCTCGCGCTGCGCTCAGCCGGGCTACGGGTACGCATCGTTGGGTAGCCCGGATAAGGCGTAGCCGC

>NZ_CP048598|1|1|991954-992068|CRISPRCasFinder
GTTGGGTAGCCCGGATAAGGCGTAACCGC	CATCCGGGAAGGTTTCCCCGGCTCGCGCTGCGCTCAGCCGGGCTACGGGTACGCATC
GTTGGGTAGCCCGGATAAGGCGTAGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048598.1\|WP_008806429.1\|984812_985472_-\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|185044
NZ_CP048598.1\|WP_015703432.1\|1001594_1002173_-\|YecA-family-protein	unknown	unknown	gnl\|CDD\|234976
NZ_CP048598.1\|WP_015369788.1\|985998_986727_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP048598.1\|WP_015369787.1\|986846_988280_+\|6-phospho-beta-glucosidase-BglA	unknown	unknown	gnl\|CDD\|184975
NZ_CP048598.1\|WP_015369791.1\|983240_983507_-\|FAD-assembly-factor-SdhE	unknown	unknown	gnl\|CDD\|182803
NZ_CP048598.1\|WP_163359213.1\|988404_988764_+\|copper-resistance-protein	unknown	unknown	unknown
NZ_CP048598.1\|WP_163359218.1\|999077_1000256_-\|2-octaprenyl-6-methoxyphenyl-hydroxylase	unknown	unknown	gnl\|CDD\|235584
NZ_CP048598.1\|WP_163359214.1\|988813_990823_+\|protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|226685
NZ_CP048598.1\|WP_015369790.1\|983730_984714_+\|tRNA-modifying-protein-YgfZ	unknown	unknown	gnl\|CDD\|236567
NZ_CP048598.1\|WP_015703422.1\|985636_985948_-\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|179908
NZ_CP048598.1\|WP_015703425.1\|990824_991436_+\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239321
NZ_CP048598.1\|WP_020077969.1\|1000252_1001569_-\|Xaa-Pro-aminopeptidase	unknown	unknown	gnl\|CDD\|182804
NZ_CP048598.1\|WP_015703428.1\|995933_996323_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP048598.1\|WP_045414353.1\|1002993_1003590_+\|5-formyltetrahydrofolate-cyclo-ligase	unknown	unknown	gnl\|CDD\|182385
NZ_CP048598.1\|WP_004205298.1\|1002339_1002669_+\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|182874
NZ_CP048598.1\|WP_049046634.1\|992929_995803_-\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP048598.1\|WP_163359215.1\|991425_991929_+\|protein-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|239309
NZ_CP048598.1\|WP_163359217.1\|997864_999067_-\|FAD-dependent-2-octaprenylphenol-hydroxylase	unknown	unknown	gnl\|CDD\|236139
NZ_CP048598.1\|WP_163359216.1\|996347_997442_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP048598.1\|WP_045359413.1\|992124_992868_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|182051

Protein	Function_ID	Function_description	E-value
NZ_CP048598.1\|WP_008806429.1\|984812_985472_-\|hemolysin-III-family-protein	gnl\|CDD\|185044	PRK15087, PRK15087, hemolysin; Provisional.	9.93513e-138
NZ_CP048598.1\|WP_015703432.1\|1001594_1002173_-\|YecA-family-protein	gnl\|CDD\|234976	PRK01736, PRK01736, hypothetical protein; Reviewed.	1.57873e-121
NZ_CP048598.1\|WP_015369788.1\|985998_986727_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.55426e-57
NZ_CP048598.1\|WP_015369787.1\|986846_988280_+\|6-phospho-beta-glucosidase-BglA	gnl\|CDD\|184975	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional.	0
NZ_CP048598.1\|WP_015369791.1\|983240_983507_-\|FAD-assembly-factor-SdhE	gnl\|CDD\|182803	PRK10878, PRK10878, FAD assembly factor SdhE.	2.85923e-47
NZ_CP048598.1\|WP_163359217.1\|997864_999067_-\|FAD-dependent-2-octaprenylphenol-hydroxylase	gnl\|CDD\|236139	PRK08013, PRK08013, oxidoreductase; Provisional.	0
NZ_CP048598.1\|WP_163359218.1\|999077_1000256_-\|2-octaprenyl-6-methoxyphenyl-hydroxylase	gnl\|CDD\|235584	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated.	0
NZ_CP048598.1\|WP_163359214.1\|988813_990823_+\|protein-disulfide-reductase	gnl\|CDD\|226685	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	3.69665e-101
NZ_CP048598.1\|WP_015369790.1\|983730_984714_+\|tRNA-modifying-protein-YgfZ	gnl\|CDD\|236567	PRK09559, PRK09559, putative global regulator; Reviewed.	0
NZ_CP048598.1\|WP_015703422.1\|985636_985948_-\|ASCH-domain-containing-protein	gnl\|CDD\|179908	PRK04980, PRK04980, hypothetical protein; Provisional.	1.76534e-62
NZ_CP048598.1\|WP_015703425.1\|990824_991436_+\|thioredoxin-domain-containing-protein	gnl\|CDD\|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	2.48131e-54
NZ_CP048598.1\|WP_020077969.1\|1000252_1001569_-\|Xaa-Pro-aminopeptidase	gnl\|CDD\|182804	PRK10879, PRK10879, proline aminopeptidase P II; Provisional.	0
NZ_CP048598.1\|WP_015703428.1\|995933_996323_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	2.27348e-72
NZ_CP048598.1\|WP_045414353.1\|1002993_1003590_+\|5-formyltetrahydrofolate-cyclo-ligase	gnl\|CDD\|182385	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional.	7.65803e-122
NZ_CP048598.1\|WP_004205298.1\|1002339_1002669_+\|cell-division-protein-ZapA	gnl\|CDD\|182874	PRK10972, PRK10972, cell division protein ZapA.	3.38717e-64
NZ_CP048598.1\|WP_049046634.1\|992929_995803_-\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP048598.1\|WP_163359215.1\|991425_991929_+\|protein-disulfide-oxidoreductase	gnl\|CDD\|239309	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.	2.21643e-47
NZ_CP048598.1\|WP_163359216.1\|996347_997442_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP048598.1\|WP_045359413.1\|992124_992868_-\|SDR-family-oxidoreductase	gnl\|CDD\|182051	PRK09730, PRK09730, SDR family oxidoreductase.	4.10769e-169

>NZ_CP048598.1|WP_163359215.1|991425_991929_+|protein-disulfide-oxidoreductase
MASKLRRWLRELAVWLLIGAAVSLAVDYFRQPALPQNFSATSLQTLDGRTLDLNAMSQQKPLLLYVWATWCGVCRYTTPSVASLAADGGNVLTVALRSGDNATLERWLTRKKMTLPTVNDPSGQLARQWDIQVTPTLVVISQGEVKSVTTGWTSSWGMRLRLWLASW
>NZ_CP048598.1|WP_015703425.1|990824_991436_+|thioredoxin-domain-containing-protein
MRAITALLLLCVSAFSFAAPAEEPQSNGNDQLAQLLFNDPNSPRTGAKEPKLTIVSFTDYNCPYCKQFDPMLEKIVHDNPDIQLIVKLLPFKGQSSVNAAKAALSTWRQQPDKFWALHQRLMAKKGYHDDASIAAAQKKTATDSVNIDDKTMDSLKMNLILSQVLNIQGTPATIIGDQMVAGAIPAEELEGLVKEQLAKARGQ
>NZ_CP048598.1|WP_163359214.1|988813_990823_+|protein-disulfide-reductase
MFMVFRRLLVCLLWLWLPVSQAADSGWLRAADNQHASVRLRAQSESNGDTRLLLDVALEKGWKTYWRSPGEGGIAPAIAWHTPLEVNWRWPTPQRFDVAGISTQGYHGDVSFPITLRGKIPPTLSGVLTLSTCSNVCILTDYPFSLDMTAPAGERFNYDFTRAMGTLPLRDGLTSVLSASYVSGKLTVTARRDAGWQQPALFIDSMEDVDFGKPSFTSRGDTLTATVPVTDSWGEAAPDLSGKTLSLVLADSGQAQESHIAIAAGSAAPGLALGWVLLMALAGGLILNVMPCVLPVLAMKLGSLVQTERRERGAVRRQFLASVCGIVVSFLALALMMTALRLGNQALGWGIQFQNPWFIGAMALVMVLFSASLLGMFEIRLSSSASTFLATRGGNGLMGHFWQGAFATLLATPCTAPFLGTAVSVALVAPLPLLWGIFFAMGIGMSLPWLLIVAWPGLAQRLPRPGRWMNHLRVVLGLMMLGSALWLVSLLTIHIGRTPVLTLLVILAIVLLLATAWRYRWRTALRAGALAIVVAGAVAFVAQQDGQGPRRDRVNWQPLSEQAIANALAEHKRVFIDVTADWCVTCKANKYNVLLRDDIQQALSAPDVIALRGDWSRPSADISQFLTARGSAAVPFNQIYGPGLPQGQILPALLDREQLLATLSAAKGK
>NZ_CP048598.1|WP_163359213.1|988404_988764_+|copper-resistance-protein
MIKRQRKAILLVLLACLVVLICTAQRMAGMHALVMNVTAASQSAQPGPDNAEAPVSPCELSAKSLMAVPPMLFEGALLAIALLLAVLAAIPPRIERIWPPRVISPPQLRVHLRLCVFRE
>NZ_CP048598.1|WP_015369787.1|986846_988280_+|6-phospho-beta-glucosidase-BglA
MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITQQVEAGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPQGDETQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGGWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAAQRINPEMQVGCMLAMVALYPYSCKPEDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDAQILREGTCAYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPHVKASDWGWQIDPVGLRYALCELYERYQKPLFIVENGFGAYDKVEADGSINDDYRIDYLRAHVEEMIKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGENL
>NZ_CP048598.1|WP_015369788.1|985998_986727_+|MurR/RpiR-family-transcriptional-regulator
MFSHAAVASLNNLEMMVYHYVIKNRDKVMYMTIRELAEAAGVSTTTVLRFCRKLQCEGYSEFRVRFKLYLEQNEPQQANIGASEIMSFFKSVNNDEFDQLLEQAVDIILSSERIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTNDMARNALAIVLSVSGETEEILRFASQFSLHHCRVMSITSHEHSRLAKLADFNLSWHVPQTRIGGVYDITTQIPVIYILESLGRKLARKIG
>NZ_CP048598.1|WP_015703422.1|985636_985948_-|ASCH-domain-containing-protein
MQANDITFFQRFQDDILAGRKTITIRDAAESHFKAGDVLRVGRYEDDGYFCTIAVTATSTVTLDTLTEQHAQQENMTLEQLRQVISEIYPAEDRFYVIEFKRL
>NZ_CP048598.1|WP_008806429.1|984812_985472_-|hemolysin-III-family-protein
MVRKPLITQGYSLAEEVANSISHGIGLVFGIVGLVLLLVQAVDTNASATAITSYSLYGGSMIMLFLASTLYHAIPHQRAKQWLKKFDHCAIYLLIAGTYTPFLLVGLNSPLAKGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLTMGWLSLIVVYQLAVKLAVGGVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYVGQS
>NZ_CP048598.1|WP_015369790.1|983730_984714_+|tRNA-modifying-protein-YgfZ
MAFTPFPPRQPSSSARLPLTLMTLDDWALATITGPDGEKYLQGQITADVSHLTADQHLLAAHCDAKGKMWSNLRVFHRDGGFAWIERRSLREAQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALPDAGKPVVTEGVTSLLWFEHPAERFLLVTDADTANRVTDALRGEAQLNNSQQWLALNIEAGLPVIDSVNSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGTASRVPEAGEDLELKMGDNWRRTGTVLAAVQLDDGSLMVQVVMNNDMEPDSVFRVRDDAGSLSIKPLPYSLEED
>NZ_CP048598.1|WP_015369791.1|983240_983507_-|FAD-assembly-factor-SdhE
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDDDKRLFIRLLENDDPDLFNWLMNHGKPADAQLQRMINLIQTRNRERGPVAI
>NZ_CP048598.1|WP_045359413.1|992124_992868_-|SDR-family-oxidoreductase
MAIALISGASRGIGRATALLLAQEGYTVAVNYHHNIKAATEVVNTIVESGGKATALRADISDEAQVMAMFEAIDRMGEPLMALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCREAVKRMSHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASKGAVDTLTTGLALEVAAQGIRVNGVRPGLIYTEMHASGGEPGRVDRVKNSLPMQRGGQPEEVAQAIAWLLSDKASYVTGSFLELAGGK
>NZ_CP048598.1|WP_049046634.1|992929_995803_-|aminomethyl-transferring-glycine-dehydrogenase
MTQTLSQLENRDAFIERHIGSDAQQQQEMLKTVGADSLNALIGQIVPQDIQLATPPQVGDATTEFAALAELKAIAGRNKRFKSYIGMGYTAVQLPPVIQRNMLENPGWYTAYTPYQPEVSQGRLESLLNFQQVTLDLTGLDIASASLLDEATAAAEAMAMAKRVSKLKNANRFFVAADVHPQTLDVVRTRAETFGFDVIVDDADKVLDHQDVFGVLLQQVGTTGEIHDYSKLIAELKARKVIVSVAADFMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEFKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVFHGPAGLKRIAGRIHRLTDILADGLQKKGLKLRHAHYFDTLCVEVADKAAVLARAEALQINLRSDIHGAVGITLDEATTREDVLNLFRAIVGDEHGLDIDTLDKDVALDSRSIPAAMLRDDAILTHPVFNRYHSETEMMRYMHALERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPVEQAEGYHQMIAQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPSSAHGTNPASAQMAGMQVVVVACDKNGNIDLADLREKAEQAGANLSCIMVTYPSTHGVYEETIREVCEIVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKQASQNAILNANYIATRLKDAYPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDFGFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDRVKAGEWPLEDNPLVNAPHTQGELVSEWNHPYSRELAVFPAGLHNKYWPTVKRLDDVYGDRNLFCSCVPMSEYQ
>NZ_CP048598.1|WP_015703428.1|995933_996323_-|glycine-cleavage-system-protein-GcvH
MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVEAGADCAVAESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYADGWIFKIKASDEAQVAALLDATAYEALLEDE
>NZ_CP048598.1|WP_163359216.1|996347_997442_-|glycine-cleavage-system-aminomethyltransferase-GcvT
MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRGDAGMFDVSHMTIVDFHGRRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYFRLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFSDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRLEAGMNLYGQEMDEGVSPLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTEKGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLGYSIALARVPAGIGDTAVVQIRNREMPVKVTKPGFVRNGKAIV
>NZ_CP048598.1|WP_163359217.1|997864_999067_-|FAD-dependent-2-octaprenylphenol-hydroxylase
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQAAPQPLDADAPPALRVSAINAASEKLLDKLGVWSEIIAQRASCYHGMEVWDKDSFGRISFDDQSMGFSHLGHIIENAVVHHALWQKAQRCADVTLLAPAQLQQVAWGENEAFLSLQDGSMLTARLVVGADGANSWLRNKADIPLTFWDYRHHALVATIRTTEPHQAVARQAFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQADAAAFNQALNIAFDNRLGLCQLESDRQVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIDELKRLHAQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGSHPAKKLLRDMGLKLADSLPGVKPQLIRQAMGLNDLPGWLR
>NZ_CP048598.1|WP_163359218.1|999077_1000256_-|2-octaprenyl-6-methoxyphenyl-hydroxylase
MSVLIVGGGMTGATLALAISRLTGGALPVHLIEAQDPASSRHPGFDDRAIALAAGTCQQLARIGIWQNLAKRATPIQRVHVSDRGHAGFVNLAAADYGLSALGQVVELHDVGQRLFSLLREAPGVTLHCPAKVEAVNRSQDSVSLTLDSGETINGKLLVAADGSRSSLGARCGISWQQQPYEQLAIIANVSTALPHEGRAFERFTEHGPLAILPMSQGRCSLVWCHPQSRRDEVLSWSDERFCQQLQQAFGWRLGRITHAGKRSVYPLALTTAIRSVSHRLALVGNAAQTLHPIAGQGFNLGLRDVMSLAEMLADAHALGEDVGNYSLLCRYQARRADDKAATIGVTDGLVHLFANRWAPLVAGRNVGLMAMELFTPARDALAQRTLGWVPR
>NZ_CP048598.1|WP_020077969.1|1000252_1001569_-|Xaa-Pro-aminopeptidase
MTQQEFLSRRQALLAQMQPGSAALIFAAPEAVRSADSEYPYRQNSDFWYFTGFNEPEALLVLIKSDETHNHSVLFNRVRDLTAEIWFGRRLGQDAAPGKLGVDRALAFSEINQQLYQLLNGLDAIYFAQGEYAYADEIVFNALEKLRKGSRQNLQAPNSVIDWRPVVHEMRLFKSAEELEVMRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFNRHGARFPSYNTIVGGGENACILHYTENESELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTKPQREIYDIVLESLETALELYRPGTSIYEVNQEVVRIMITGLVRLGILKGEIDELIANNAHRPYFMHGLSHWLGLDVHDVGNYDTDRSRVLEPGMVLTVEPGLYIATDADVPAQYRGIGIRIEDDIVITEDGNENLTASVVKKADEIEALMAAARQS
>NZ_CP048598.1|WP_015703432.1|1001594_1002173_-|YecA-family-protein
MSIQNEMPGYNDVDQLLNQQGVGLTPAEMHGLISGILCGGNTDSSWQPLVHDLTNEGLAFGHELAQALRSMHSATSDSLEDDGFLFQLYMPEGDNVSVFDRADALAGWVNHFLLGLGVTQPKLDKVKDETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFARQQPTAPEVRKPTLH
>NZ_CP048598.1|WP_004205298.1|1002339_1002669_+|cell-division-protein-ZapA
MSAQPVDLQIFGRSLRVNCPPEQRDALNQAAEDLNQRLQDLKERTRVTNTEQLVFIAALNISYELTQEKAKTRDYASSMEQRIRMLQQTIEQALLEQGRISERPGSKFE
>NZ_CP048598.1|WP_045414353.1|1002993_1003590_+|5-formyltetrahydrofolate-cyclo-ligase
MTIQPDIPLSRQQIRQQIRERRRALSAEQQQRFALQAAERMMAYPPVVLAHTVALFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSPGNLLFLHYHPQSQLIFNRLKIYEPKLDVRDVLPLAELDVLITPLVAFDASGQRLGMGGGFYDRTLQNWRQYRLQPVGYAHDCQQVDTLPSEQWDIPLPAVITPGKTWRW

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Crispr_ID: NZ_CP048598_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048598_2

1188031-1188168

Orphan

Consensus_repeat	Method
CCGGAACGCCATTCCGTAGGTCGGGTAAGGCGAAGCCGCTACCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048598_2

>merge|NZ_CP048598|2|1188031-1188168|CRISPRCasFinder
CCGGAACGCCATTCCGTAGGTCGGGTAAGGCGAAGCCGCTACCCGCATCCAGTTCCCCGGCGGCGCTGCGCCTGGCCGGGCTACCGGTCCTGCCCGGAACGCCATTCTGTAGGTCGGGTAAGGCGAAGCCGCTACCCG

>NZ_CP048598|2|2|1188031-1188168|CRISPRCasFinder
CCGGAACGCCATTCCGTAGGTCGGGTAAGGCGAAGCCGCTACCCG	CATCCAGTTCCCCGGCGGCGCTGCGCCTGGCCGGGCTACCGGTCCTGC
CCGGAACGCCATTCTGTAGGTCGGGTAAGGCGAAGCCGCTACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048598.1\|WP_015369594.1\|1193578_1195012_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|237929
NZ_CP048598.1\|WP_048231375.1\|1188282_1191375_+\|beta-galactosidase-subunit-alpha	unknown	unknown	gnl\|CDD\|236673
NZ_CP048598.1\|WP_020077888.1\|1183249_1184023_-\|siderophore-interacting-protein	unknown	unknown	gnl\|CDD\|225250
NZ_CP048598.1\|WP_009485171.1\|1191915_1193349_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|237929
NZ_CP048598.1\|WP_020077887.1\|1184253_1184772_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP048598.1\|WP_004144833.1\|1199685_1200687_-\|autoinducer-2-ABC-transporter-substrate-binding-protein-LsrB	unknown	unknown	gnl\|CDD\|237961
NZ_CP048598.1\|WP_007372182.1\|1176625_1177723_-\|glycerol-dehydrogenase	unknown	unknown	gnl\|CDD\|181843
NZ_CP048598.1\|WP_032712558.1\|1191371_1191821_+\|beta-galactosidase-subunit-beta	unknown	unknown	gnl\|CDD\|182302
NZ_CP048598.1\|WP_007372179.1\|1179360_1179993_+\|dihydroxyacetone-kinase-ADP-binding-subunit-DhaL	unknown	unknown	gnl\|CDD\|182192
NZ_CP048598.1\|WP_015369602.1\|1180003_1181422_+\|dihydroxyacetone-kinase-subunit-DhaM	unknown	unknown	gnl\|CDD\|183108
NZ_CP048598.1\|WP_042897872.1\|1186457_1186790_-\|tRNA-binding-protein	unknown	unknown	gnl\|CDD\|182232
NZ_CP048598.1\|WP_015369601.1\|1181496_1183146_+\|glycerone-kinase	unknown	unknown	gnl\|CDD\|274097
NZ_CP048598.1\|WP_002917724.1\|1198786_1199674_-\|3-hydroxy-5-phosphonooxypentane-2,4-dione-thiolase	unknown	unknown	gnl\|CDD\|181306
NZ_CP048598.1\|WP_163359237.1\|1200688_1201687_-\|autoinducer-2-import-system-permease-LsrD	unknown	unknown	gnl\|CDD\|184998
NZ_CP048598.1\|WP_020077884.1\|1186997_1187981_+\|transcriptional-regulator-EbgR	unknown	unknown	gnl\|CDD\|182389
NZ_CP048598.1\|WP_163359236.1\|1195025_1196084_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048598.1\|WP_048231376.1\|1196101_1198453_+\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|236653
NZ_CP048598.1\|WP_015369591.1\|1198493_1198790_-\|(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione-isomerase	unknown	unknown	gnl\|CDD\|182494
NZ_CP048598.1\|WP_020077886.1\|1185035_1186415_+\|putrescine-aminotransferase	unknown	unknown	gnl\|CDD\|183175
NZ_CP048598.1\|WP_020077889.1\|1178279_1179350_+\|dihydroxyacetone-kinase-subunit-DhaK	unknown	unknown	gnl\|CDD\|183150

Protein	Function_ID	Function_description	E-value
NZ_CP048598.1\|WP_015369594.1\|1193578_1195012_+\|amino-acid-permease	gnl\|CDD\|237929	PRK15238, PRK15238, inner membrane transporter YjeM; Provisional.	3.63323e-45
NZ_CP048598.1\|WP_048231375.1\|1188282_1191375_+\|beta-galactosidase-subunit-alpha	gnl\|CDD\|236673	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed.	0
NZ_CP048598.1\|WP_020077888.1\|1183249_1184023_-\|siderophore-interacting-protein	gnl\|CDD\|225250	COG2375, ViuB, Siderophore-interacting protein [Inorganic ion transport and metabolism].	3.83494e-73
NZ_CP048598.1\|WP_009485171.1\|1191915_1193349_+\|amino-acid-permease	gnl\|CDD\|237929	PRK15238, PRK15238, inner membrane transporter YjeM; Provisional.	1.81959e-40
NZ_CP048598.1\|WP_020077887.1\|1184253_1184772_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	9.85192e-24
NZ_CP048598.1\|WP_004144833.1\|1199685_1200687_-\|autoinducer-2-ABC-transporter-substrate-binding-protein-LsrB	gnl\|CDD\|237961	PRK15408, PRK15408, autoinducer 2 ABC transporter substrate-binding protein LsrB.	0
NZ_CP048598.1\|WP_007372182.1\|1176625_1177723_-\|glycerol-dehydrogenase	gnl\|CDD\|181843	PRK09423, gldA, glycerol dehydrogenase; Provisional.	0
NZ_CP048598.1\|WP_032712558.1\|1191371_1191821_+\|beta-galactosidase-subunit-beta	gnl\|CDD\|182302	PRK10202, ebgC, beta-galactosidase subunit beta.	1.94063e-87
NZ_CP048598.1\|WP_007372179.1\|1179360_1179993_+\|dihydroxyacetone-kinase-ADP-binding-subunit-DhaL	gnl\|CDD\|182192	PRK10005, PRK10005, dihydroxyacetone kinase ADP-binding subunit DhaL.	3.34409e-151
NZ_CP048598.1\|WP_015369602.1\|1180003_1181422_+\|dihydroxyacetone-kinase-subunit-DhaM	gnl\|CDD\|183108	PRK11377, PRK11377, dihydroxyacetone kinase subunit M; Provisional.	0
NZ_CP048598.1\|WP_042897872.1\|1186457_1186790_-\|tRNA-binding-protein	gnl\|CDD\|182232	PRK10089, PRK10089, chaperone CsaA.	6.59492e-47
NZ_CP048598.1\|WP_015369601.1\|1181496_1183146_+\|glycerone-kinase	gnl\|CDD\|274097	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent. This family consists of examples of the form of dihydroxyacetone kinase (also called glycerone kinase) that uses ATP (2.7.1.29) as the phosphate donor, rather than a phosphoprotein as in E. coli. This form is composed of a single chain with separable domains homologous to the K and L subunits of the E. coli enzyme, and is found in yeasts and other eukaryotes and in some bacteria, including Citrobacter freundii. The member from tomato has been shown to phosphorylate dihydroxyacetone, 3,4-dihydroxy-2-butanone, and some other aldoses and ketoses ().	0
NZ_CP048598.1\|WP_002917724.1\|1198786_1199674_-\|3-hydroxy-5-phosphonooxypentane-2,4-dione-thiolase	gnl\|CDD\|181306	PRK08227, PRK08227, 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase.	0
NZ_CP048598.1\|WP_163359237.1\|1200688_1201687_-\|autoinducer-2-import-system-permease-LsrD	gnl\|CDD\|184998	PRK15038, PRK15038, autoinducer 2 ABC transporter permease LsrD.	2.06258e-146
NZ_CP048598.1\|WP_020077884.1\|1186997_1187981_+\|transcriptional-regulator-EbgR	gnl\|CDD\|182389	PRK10339, PRK10339, DNA-binding transcriptional repressor EbgR; Provisional.	0
NZ_CP048598.1\|WP_048231376.1\|1196101_1198453_+\|alpha-glucosidase	gnl\|CDD\|236653	PRK10137, PRK10137, alpha-glucosidase; Provisional.	0
NZ_CP048598.1\|WP_015369591.1\|1198493_1198790_-\|(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione-isomerase	gnl\|CDD\|182494	PRK10486, PRK10486, (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase.	3.06054e-60
NZ_CP048598.1\|WP_020077886.1\|1185035_1186415_+\|putrescine-aminotransferase	gnl\|CDD\|183175	PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional.	0
NZ_CP048598.1\|WP_020077889.1\|1178279_1179350_+\|dihydroxyacetone-kinase-subunit-DhaK	gnl\|CDD\|183150	PRK11468, PRK11468, dihydroxyacetone kinase subunit DhaK; Provisional.	0

>NZ_CP048598.1|WP_020077884.1|1186997_1187981_+|transcriptional-regulator-EbgR
MATLKDIATEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKSSSARKTQVLPVGHHHILALYSYQQELEINDPYYLAIRHGIETQCEKLAIELTNCYLNNTLPELKKVTGVLIIGQPTRELRETASALTDNICFIDFHEAGSPYDAVDIDLVRIAKEVVDFFIQQGASRIGFIGGQDQPGKADIREVAFVEYGQLKGVVSADDIWRGGFSSSSGYELAKQMLVQAEFPRALFVASDSIAIGVLRAIHERGLAIPEDISLISVNDIPTARFTFPPLSTVRIHSEMMGSQGVNLLIEKARDGRALPLNVFVPSVLKLRGTTR
>NZ_CP048598.1|WP_042897872.1|1186457_1186790_-|tRNA-binding-protein
MDTVAYADFAKLEMRVGKIVEVKRHDNADKLYIARIDVGDRTLQTVTSLVPYYSEEELLGKTVVVLCNLAKAKMRGETSECMLLCAETEDESESVLLTPERVMPAGVRIV
>NZ_CP048598.1|WP_020077886.1|1185035_1186415_+|putrescine-aminotransferase
MNRLPSSASALACSAHALNLIEKQSLSHDEMKALNQEVREYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVENQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFVATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGDINAMRSILSECKKTGDDVAAVILEPIQGEGGVILPPAGYLPAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATVATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLSQNLPAQAEQKGDLLLDGFRQLAREYPDLVNEVRGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRVEPPLTLTLEQCEQVLKAARKALAALRISVEET
>NZ_CP048598.1|WP_020077887.1|1184253_1184772_+|PadR-family-transcriptional-regulator
MRHHHEEGHGEQGRRGGGRRQRFFGHGELRLVILDILSRNASHGYELIKEIEALTQGNYSPSPGVIYPTLDLLQDQGLISVEEENGRKKIAITEEGRRLCAESGEQLSQIQTRLQERMIGCELRKNPQMKRALENFKAVLDLKVNQQSISDAQLKQIIGVIDRAAMEISQLD
>NZ_CP048598.1|WP_020077888.1|1183249_1184023_-|siderophore-interacting-protein
MTIINQTKYPQRVRNELRFRELTVLRVERIGQAFQRIVLGGEALDGFVSQGFDDHTKLFFPQAGSVFTPPEVTDEGINWGEGVRPATRDYTPLYDAERHELAYDFYIHDGGIASRWALEANVGDKLVIGGPRGSLVVPEDYAWQLYVCDESGMPALRRRLLGLRQLPVTPQVTAIVTIADASYKDYLADLDGFNIEWVVGHNPAFVAERLAQVKVPSEDYFIWLTGEGGVVKSLLARFEEPSIDQQLVRSQAYWHSK
>NZ_CP048598.1|WP_015369601.1|1181496_1183146_+|glycerone-kinase
MSQFFFNQRASLVNDVIEGTIIASPWNNLARLESDPAIRVVVRRDLNKNNVAVISGGGSGHEPAHVGFIGKGMLTAAVCGDLFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDNKQPRGIAGTILVHKVAGYFAERGFNLATVLREAQYAANHTASIGVALASCHLPQEAESAPRHQPGHAELGMGIHGEPGASTIATHNSAEIMQIMVEKLTAVLPETGRLAVMLNNLGGVSVAEMAILTRELANTPLHARVDWLIGPASLVTALDMKGFSLTTIVLEESIEKALLSDVETASWQKPVQPRAVNIMPSALASARVSFTPSANPQVGDYVAQVTSTLSGLETHLNALDAKVGDGDTGSTFAAGAREIAALLQRQQLPLNDLPTLFALIGERLTVVMGGSSGVLMSIFFTAAGQKLEQGASMAEALNAGLGQMKFYGGADEGDRTMIDALQPALAALLAEPDNLQAAFAAAQAGADRTCQSSKAGAGRASYLNSESLLGNMDPGAHAVAMVFKALAER
>NZ_CP048598.1|WP_015369602.1|1180003_1181422_+|dihydroxyacetone-kinase-subunit-DhaM
MVNLVIVSHSARLGEGVGELARQMLMNDGCKLAIAAGIDDPDNPIGTDPIKVMEAIESVADTDHVLVMMDIGSALLSAETALDLLDPAMAAKVRLCAAPLVEGTLAATVSAASGAGIDKVIADAMNALEAKRVQLGLPSHTPDAAAPTLADDGDAKSVSVIINNHNGLHVRPASKLVAALAGFNADLVLEKNGKCVTPDSLNQIALLQVRRHDKLRLLARGPDADAALAAFQALAADNFGESPEAQPTAEPAIPARVEGAALLYPLAPIQPALPAAADVAREQQRLRQAIDQTLADLNALTELAENKFNADIAAIFAGHHTLLDDEDLFDAANDRLLTEQCSAEWAWHQVLMELSQQYRQLDDAYLQARYIDVDDILQRTLRHLQGIKETLPFASEPTIIIADNIYPSTVLQLDASQVTGLCLRDGSEQAHGAIIARAAGIAWLCQQGEALNDIQPGEAITLDMRQQRLIRR
>NZ_CP048598.1|WP_007372179.1|1179360_1179993_+|dihydroxyacetone-kinase-ADP-binding-subunit-DhaL
MSLNRTQIVDWLYRCGDIFTKQSDFLTGLDKEIGDADHGLNMHRGFSKVVEKLPSIADKDIGFILKNTGMTLLSNVGGASGPLFGTFFIRAAQVTQAHQSLTLDELYQMIREGADGVVNRGKAEPGDKTMCDVWLPVVESLRHSSEQHLSIPAALDAACEVAERAAHATITMQARKGRASYLGERSIGHQDPGATSVLFMVQMLAAAAKE
>NZ_CP048598.1|WP_020077889.1|1178279_1179350_+|dihydroxyacetone-kinase-subunit-DhaK
MKKLINRVEDVLSEQLIGLAKAHPELTLHQDPVYVTRADAPVAGKVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKMFECAMQIDGGEGVLLIIKNYTGDILNFETATELLHESGVKVTTVVVDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLEACAELGRRLNNLGHSIGIALGACTVPAAGQPSFTLKDDEMEFGVGIHGEPGIDRRRFSSLDQTVDEMFDTLLENGAYSRTLRQWDNVKGAWQEVKQSKTALQNGDRVIALVNNLGATPLSELYGVYNRLAQRCEASGIVIERNLIGSYCTSLDMAGFSITLLKADDDTLALWDAPVHTPALNWGK
>NZ_CP048598.1|WP_007372182.1|1176625_1177723_-|glycerol-dehydrogenase
MLKVIQSPAKYLQGPDAAMLFGEYAKNLADSFFVIADDFVMKLAGDKVLNGLHSHNISCHAERFNGECSHAEINRLIAILKQHGCRGVVGIGGGKTLDTAKAIGYYQKLPVVVIPTIASTDAPTSALSVIYTEAGEFEEYLIYPKNPDMVVMDTAIIAKAPVRLLVAGMGDALSTWFEAKACFDARATSMAGGQSTAAALSLARLCYDTLLAEGEKARLAAQAGVVTDALERIVEANTYLSGIGFESSGLAGAHAIHNGFTILEECHHLYHGEKVAFGTLAQLVLQNSPLEEIETVMGFCEKVGLPITLAQMGVKEGIESKIHAVAKATCAEGETIHNMPFPVTADSVYAAILTADLLGQQWLAR
>NZ_CP048598.1|WP_048231375.1|1188282_1191375_+|beta-galactosidase-subunit-alpha
MNRWENLQLTHENRLPPRAYFFSYDSLAQARTFARETSSRFLSLSGQWNFRFFTNPLLVPESFTSCYQNEWGPITVPGMWQMEGHGQLQYTDEGFPFPIDVPYVPTDNPTGAYQRLFTLGDGWQGKQTIIKFDGVETYFEVYVNGQYIGFSKGSRLTAEFDISAAVKTGDNLLCVRVMQWADSTYIEDQDMWWSAGIFRDVYLVGKNPLHVQDFTVRTDFNDDYIDATLSCQLTLENLAPQTAAATLEYTLFDGEKALYSGNVGQLQVSQQLNTGFTIDVNAPQQWSAESPYLYHLVLTLKNAAGEVLEIIPQRVGFRDIKVRDGLFYINNRYVMLHGVNRHDNDHLKGRAVGMDRVEKDLLLMKQHNINSVRTAHYPNDPRFYEMCDIYGLFVMAETDVESHGFANVGNLSAITDDPAWEHIYVERIVRHVHAQKNHPSIVIWSLGNESGYGCNIRAMYHATKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEHPHEKPRIICEYAHAMGNGPGGLTEYQNVFYQHDCIQGHYVWEWCDHGIQASDENGAVWYKFGGDYGDYPNNYNFCLDGLIFSDQTPGPGLREYKQVIAPVKVQARDICRGELRVENKLWFSTLDDYTLRVEVRAEGETLSSQLLKVQDLAPNSGRDLQIALPQLDEREAFVNIMVTKDSRTPYSEANHDIAVYQFPLKARTAARTPLLNASATPLQIADERLSYTISSHNFRVVFSKVSGKLSEWQVNGVDQVTREPKINFFKPMIDNHKQEYEGLWQPAHLQIMQEHLREFSAEIEGETVVITTRSVIAPPVFDFGMRCTYRWQITPQGHINVELAGERYGDYPHIVPCIGFMLGINGEFDQVNYYGRGPGENYADSQQSNIIDIWHTTVDDMFVNYPFPQNNGNRQHVRWASFSDRHGSGLLVVPRNPLNVSAWHFTAENLHAAQHCNELQRSDDITLNIDAQLLGLGSNSWGSEVLDSWRVWLNTFNYGFTLLPLEGGCGTSQVLANHSFGAGFFSPVAHSEAEK
>NZ_CP048598.1|WP_032712558.1|1191371_1191821_+|beta-galactosidase-subunit-beta
MRILDNLEQFTQVYHSGRKWQRCVEAINNIDNIRPGVAHSIGDSLSYRVETDSTTDALFVGNRRYFEVHYYLQGQQKIEFAAKENLQTVACYRDETDREYLKGIGETVKVHEGQMVICDIDEAYRFICDAPVKKVVLRVTVEDGYFLNK
>NZ_CP048598.1|WP_009485171.1|1191915_1193349_+|amino-acid-permease
MSESVRAKIGKFALLSMAFTAVFNVRNIVNNNIELGLSSAPIFLFATIVYFIPFVFIIAEFVSANKHSESGMYAWLKQPLGTRAAYLGSFLYWFVNLFFFLSLLPNVVAYASYAITGYAIPFSPMVTSLISIVLFAMATHISTKGATWLGKISECVAYGVFALFAIYVVGALTALGSGHVPAQPITLAAMEPTINWATLGIMCWIFQAAGGAETVAAYLNDTKGGQKSFIKVIITAGVLIGGMYALGSLLVNVFVARENLTYAGGMVEIFTGLGAYFHISEALMGRFVGIILFIAIFGSMMMWTAAPVKIHFSEIPKGIYGQKTTELNAHGVPVRAAWWQFLFVFLMLIVNGFGSASVQQMMNTAINLTAGTAMLPPLFIMAAYFVFRWKHDDTPRDFRMGSRKVGMSVVSMLIVIFVVSMTASAFPPGVDLVNAFFINVFMTAVFSGLAWWWITRFEKKQQRLRAAAPVNAAAAGK
>NZ_CP048598.1|WP_015369594.1|1193578_1195012_+|amino-acid-permease
MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFFLATLFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEYILTPFATTVLSMALFAFSTWISTNGAKMLGPITSVTSSLMLLLTLSYILLAGTALVGGVQPADPITVEAMIPNFNWAFLGITTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIILAGIFIGVLYSISSVLINVFVSSKELKFTGGSVQVFHGLAAYFGLPEILMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPSGIFGKKTVELNENGVPARAAWIQYLIVIPLMIIPTLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRRKLDHLPRDFRMGSRTTGIVVVSMLIVIFAIGFVASTFPTGGNILTIIFYNVGGIVIFLGFAWWKYSRYVKGLTQEQQQIEAAPASHTS
>NZ_CP048598.1|WP_163359236.1|1195025_1196084_+|hypothetical-protein
MKTNSYLYGALVALAFCAPAAAAETVHPAEHDDTKTPELTTTSYRFYGELGVGGYMDLEGEDKHKYSDGTYIEGGLEVKNGHWFGLIYGEAWTVQADSQGNAWTPGHSWGGVEGGLNRLYGGYKTDNNTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMYALKVQNRSGDFRYSVTATPAGHHDESKAWLHFGKYDRYDDKYSYPAMINGYVQYDIVKDVTWMNGLEVTDGTGQLFLTGVLSPNLAFRAWHHTGRAKGLDVPGSETGFMASAMYEALSGLYFSTAYSYAKHRPDHAADETTAFMQFGIWYEYGGGRFATAADSRFYTSNASGDPSDKIFLMQYFYW
>NZ_CP048598.1|WP_048231376.1|1196101_1198453_+|alpha-glucosidase
MNLTTTLTPLACALMLSFSAHAATAQAFKNVIDRSGAPQYMQDFDADDHQRFNPFFDLGAWHGHLLPDSPATMGGFPGPALLTEEYINFMATNFDRLMVYQNGKKVDFTLQAWSLPGALKQTLTAPGVKVEMTLRFASAHTSLLETKITSNTPLKLVWDGELLEKLAAKEGKALSDKTIDEAFPDYQRRLIATPDGLTLSFGKVRAASDLMTSGESQYQIHRSLATETRIDGHSFTSSAEIRGSTTLYTTYSHLLTAEQARREKAQIRDILARPAYYLTASEQRWDGYLQKGLSNPDATAEQTRVAVKAIETLNGNWRAPGGAVHYHTVTPSVTGRWFSGNQTWPWDTWKQAYAMAHFNPDIAKENIRAVFSWQIKANDKVRPQDAGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAWSVMEVYNVTKDKAWLEEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTADGAMLFTVKKGQTEQTLSGLSAYEQVTAKGDYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRDRDGNLLGYSLLQESVDQASYMYSDNHYLAQMATILGKAEEAKRYQALATKLADYINTCMFDPQTRFYYDIRIEEQPLANGCAGKPIVERGKGPEGWSPLFNGAATQQHADDVVSVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGHRDEALKLADAFFQHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNEFFRKQ
>NZ_CP048598.1|WP_015369591.1|1198493_1198790_-|(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione-isomerase
MNVTLVEINIKPERVDEFLEVFRANHEGALREPGNLRFDVLQDPEVKTRFFIYEAYKDDEAVLAHKKTPHYLACVEKLEEMMSQPRQKRSFIGLLPQM
>NZ_CP048598.1|WP_002917724.1|1198786_1199674_-|3-hydroxy-5-phosphonooxypentane-2,4-dione-thiolase
MADLDDIKEGKDFGIDRPQQNTLYTLKGCGSLDWGMQSRLARIFNPHSNRTVMLAFDHGYFQGPTTGLERIDLSIAPLFADTDVLMCTRGVLRSQVPAATNKPVVLRASGGNSILSELSNECVAVAMEDALRLNVCAVAAQVYIGSEYEHQSINNIIKLVDAGNRYGMPVLAVTGVGKEMTRDARYFSLASRIAAEMGAQFVKTYFVEEGFEKVTASCPVPIVIAGGKKLPEHEALEMCWRAIDQGASGVDMGRNIFQSSAPRAMLKAVKKVVHENLNAREAYQFWQEEKQGELK
>NZ_CP048598.1|WP_004144833.1|1199685_1200687_-|autoinducer-2-ABC-transporter-substrate-binding-protein-LsrB
MKLKLIVLALAMSVVTAQAADRIAFIPKLVGVGFFTSGGNGAKEAGKALGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDTKPECRSIYINQGTPQQLGGLLVEMAEKQVSKPAAKVAFFYSSPTVTDQNQWVKEAKAKIEKEHPQWQIVTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAAQAAENLKRQGVAIVGFSTPNVMRPYVERGTVKAFGLWDVVQQGKIAVNVADRLLKKGDLNVGDSVEVKDIGSLKVEPNSVQGYQYEAKGNGIVLLPERVVFSKENINNYDF
>NZ_CP048598.1|WP_163359237.1|1200688_1201687_-|autoinducer-2-import-system-permease-LsrD
MKLKLNWESALLALLIAEILLFGALNPRMLDINMLLFSTSDFICIGIVALPLTLVIISGGIDISLGSTIGLCAIALGVMTQAGWPLWLAVSLTLLLGLLCGLFNAALIHYTGISPLVITLGTLYLYGGGALLLSGMAGATGYEGIGGFPDSFTAFANLTLAGLPLPLVLFAIITFFFWLLAHRGRFGRHLFLLGQNPRAARYAALSVNGIPYVLYGLVGVASAVAALVMVSYFGSARSDLGRDLLMPVLTAAVLGGANIYGGSGSILGTALAALLVGYLQQGLQMVGIPNQVSSALSGALLVVVVMGRSLSLHREWVRATWRRLFSHKTIGA

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Crispr_ID: NZ_CP048598_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048598_3

2786592-2786732

Orphan

Consensus_repeat	Method
TGTGCGATTTGGTAGCCCGGACAAGGCGCAATGCGCCGCCTCCGGGAAAATCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048598_3

>merge|NZ_CP048598|3|2786592-2786732|CRISPRCasFinder
TGTGCGATTTGGTAGCCCGGACAAGGCGCAATGCGCCGCCTCCGGGAAAATCCCCGGTGGCGCTAGTGCTTACCGGGGCTACAGCGCTGTGCGATTTGGTAGCCCGGATAAGGCGCAATGCGCCGCCTCCGGGAAAATCCC

>NZ_CP048598|3|3|2786592-2786732|CRISPRCasFinder
TGTGCGATTTGGTAGCCCGGACAAGGCGCAATGCGCCGCCTCCGGGAAAATCCC	CGGTGGCGCTAGTGCTTACCGGGGCTACAGCGC
TGTGCGATTTGGTAGCCCGGATAAGGCGCAATGCGCCGCCTCCGGGAAAATCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048598.1\|WP_015368181.1\|2789716_2790061_+\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
NZ_CP048598.1\|WP_015704439.1\|2791591_2792290_-\|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|180148
NZ_CP048598.1\|WP_045411605.1\|2780617_2782822_+\|ferrichrome-porin-FhuA	unknown	unknown	gnl\|CDD\|236643
NZ_CP048598.1\|WP_015368179.1\|2790798_2791599_-\|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF	unknown	unknown	gnl\|CDD\|179575
NZ_CP048598.1\|WP_015704437.1\|2790137_2790764_-\|TRIC-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|182564
NZ_CP048598.1\|WP_048230632.1\|2772136_2773018_-\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	unknown	unknown	gnl\|CDD\|235573
NZ_CP048598.1\|WP_045386052.1\|2774413_2774950_-\|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl\|CDD\|185079
NZ_CP048598.1\|WP_015368189.1\|2777822_2780375_+\|bifunctional-glycosyl-transferase/transpeptidase	unknown	unknown	gnl\|CDD\|236544
NZ_CP048598.1\|WP_045411611.1\|2784551_2786534_+\|Fe(3+)-hydroxamate-ABC-transporter-permease-FhuB	unknown	unknown	gnl\|CDD\|236720
NZ_CP048598.1\|WP_048230149.1\|2786756_2788037_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|234607
NZ_CP048598.1\|WP_163359269.1\|2788174_2789635_+\|H(+)/Cl(-)-exchange-transporter-ClcA	unknown	unknown	gnl\|CDD\|235385
NZ_CP048598.1\|WP_007373199.1\|2773078_2773534_-\|RNA-polymerase-binding-protein-DksA	unknown	unknown	gnl\|CDD\|182722
NZ_CP048598.1\|WP_032716046.1\|2792373_2793888_+\|dGTPase	unknown	unknown	gnl\|CDD\|235320
NZ_CP048598.1\|WP_163359268.1\|2783664_2784555_+\|Fe(3+)-hydroxamate-ABC-transporter-substrate-binding-protein-FhuD	unknown	unknown	gnl\|CDD\|236719
NZ_CP048598.1\|WP_020079583.1\|2795639_2796797_+\|CdaR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183155
NZ_CP048598.1\|WP_048230633.1\|2775022_2777452_+\|ATP-dependent-helicase-HrpB	unknown	unknown	gnl\|CDD\|236950
NZ_CP048598.1\|WP_048230635.1\|2796833_2799809_-\|viral-enhancin-protein	unknown	unknown	gnl\|CDD\|367432
NZ_CP048598.1\|WP_015368187.1\|2782867_2783665_+\|Fe3+-hydroxamate-ABC-transporter-ATP-binding-protein-FhuC	unknown	unknown	gnl\|CDD\|182561
NZ_CP048598.1\|WP_015704441.1\|2794029_2795463_+\|serine-endoprotease-DegP	unknown	unknown	gnl\|CDD\|236802
NZ_CP048598.1\|WP_015368194.1\|2773697_2774414_-\|DNA/RNA-nuclease-SfsA	unknown	unknown	gnl\|CDD\|234733

Protein	Function_ID	Function_description	E-value
NZ_CP048598.1\|WP_015368181.1\|2789716_2790061_+\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	1.42921e-81
NZ_CP048598.1\|WP_015704439.1\|2791591_2792290_-\|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase	gnl\|CDD\|180148	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase.	1.01373e-138
NZ_CP048598.1\|WP_045411605.1\|2780617_2782822_+\|ferrichrome-porin-FhuA	gnl\|CDD\|236643	PRK10044, PRK10044, ferrichrome outer membrane transporter; Provisional.	0
NZ_CP048598.1\|WP_015368179.1\|2790798_2791599_-\|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF	gnl\|CDD\|179575	PRK03379, PRK03379, vitamin B12-transporter protein BtuF; Provisional.	8.32544e-165
NZ_CP048598.1\|WP_015704437.1\|2790137_2790764_-\|TRIC-cation-channel-family-protein	gnl\|CDD\|182564	PRK10578, PRK10578, hypothetical protein; Provisional.	3.74484e-128
NZ_CP048598.1\|WP_048230632.1\|2772136_2773018_-\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	gnl\|CDD\|235573	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS.	8.55461e-153
NZ_CP048598.1\|WP_045386052.1\|2774413_2774950_-\|RNA-2',3'-cyclic-phosphodiesterase	gnl\|CDD\|185079	PRK15124, PRK15124, RNA 2',3'-cyclic phosphodiesterase.	4.41487e-118
NZ_CP048598.1\|WP_015368189.1\|2777822_2780375_+\|bifunctional-glycosyl-transferase/transpeptidase	gnl\|CDD\|236544	PRK09506, mrcB, bifunctional glycosyl transferase/transpeptidase; Reviewed.	0
NZ_CP048598.1\|WP_045411611.1\|2784551_2786534_+\|Fe(3+)-hydroxamate-ABC-transporter-permease-FhuB	gnl\|CDD\|236720	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB.	0
NZ_CP048598.1\|WP_048230149.1\|2786756_2788037_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NZ_CP048598.1\|WP_163359269.1\|2788174_2789635_+\|H(+)/Cl(-)-exchange-transporter-ClcA	gnl\|CDD\|235385	PRK05277, PRK05277, H(+)/Cl(-) exchange transporter ClcA.	0
NZ_CP048598.1\|WP_007373199.1\|2773078_2773534_-\|RNA-polymerase-binding-protein-DksA	gnl\|CDD\|182722	PRK10778, dksA, RNA polymerase-binding protein DksA.	8.14556e-92
NZ_CP048598.1\|WP_032716046.1\|2792373_2793888_+\|dGTPase	gnl\|CDD\|235320	PRK04926, dgt, deoxyguanosinetriphosphate triphosphohydrolase; Provisional.	0
NZ_CP048598.1\|WP_163359268.1\|2783664_2784555_+\|Fe(3+)-hydroxamate-ABC-transporter-substrate-binding-protein-FhuD	gnl\|CDD\|236719	PRK10576, PRK10576, Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD.	0
NZ_CP048598.1\|WP_020079583.1\|2795639_2796797_+\|CdaR-family-transcriptional-regulator	gnl\|CDD\|183155	PRK11477, PRK11477, CdaR family transcriptional regulator.	0
NZ_CP048598.1\|WP_048230633.1\|2775022_2777452_+\|ATP-dependent-helicase-HrpB	gnl\|CDD\|236950	PRK11664, PRK11664, ATP-dependent RNA helicase HrpB; Provisional.	0
NZ_CP048598.1\|WP_048230635.1\|2796833_2799809_-\|viral-enhancin-protein	gnl\|CDD\|367432	pfam03272, Mucin_bdg, Putative mucin or carbohydrate-binding module. This family is the putative binding domain for the substrates of enhancin, and other similar metallopeptidases. This is not the enzymically active, peptidase, part of the proteins - see pfam13402.	1.00843e-23
NZ_CP048598.1\|WP_015368187.1\|2782867_2783665_+\|Fe3+-hydroxamate-ABC-transporter-ATP-binding-protein-FhuC	gnl\|CDD\|182561	PRK10575, PRK10575, Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC.	0
NZ_CP048598.1\|WP_015704441.1\|2794029_2795463_+\|serine-endoprotease-DegP	gnl\|CDD\|236802	PRK10942, PRK10942, serine endoprotease DegP.	0
NZ_CP048598.1\|WP_015368194.1\|2773697_2774414_-\|DNA/RNA-nuclease-SfsA	gnl\|CDD\|234733	PRK00347, PRK00347, DNA/RNA nuclease SfsA.	2.27632e-142

>NZ_CP048598.1|WP_045411611.1|2784551_2786534_+|Fe(3+)-hydroxamate-ABC-transporter-permease-FhuB
MNARFSPLAMILLAVLLVAAFALSIVNLQVALPYAQWRQALWQPDSDNIAQMLFHYSLLPRLAVSLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGMTVTTLWAIPGVLASQFAALAGACLVGALVFGVSWGKRLSPVTLILAGLVVSLYCGAVNQLMVIFHHDQLQSMFLWSTGTLTQTDWSVAQRLWPQLLGGAMLTLLLLRPLTLMGLDDGVARNLGLALSLARLGVLTLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLSRLVLAALLGALILWLSDQIILWLSRIWREVSTGSVTALIGAPLLLWLLPRLRSISAPVMNGGDKALIERRNVQWFALGGLALMLLAVTAALTFGRDAQGWQWASGDLLEQLMPWRWPRVFSALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFFVPGNAFVWLLPAGSLGAAATLLVILVAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQILTWMSGSTYSATPEMVLRSGVVMLALLALAPLCRRWLTILPLGGEAARAVGMALTPSRIGLLLLAASLTATATLTIGPLSFVGLMAPHIARMMGFRRTMPHMVISGLIGGMLLVFADWCGRMIMFPYQIPAGLLSTFIGAPYFIYLLRKQSR
>NZ_CP048598.1|WP_163359268.1|2783664_2784555_+|Fe(3+)-hydroxamate-ABC-transporter-substrate-binding-protein-FhuD
MENSNFFSRRRLLTAMALSPLLWQMRGAQAANVDPQRVVTLEWLPAELLLALGVTPYGVADIPNYNLWVNEPALPASVIDVGLRTEPNLELLTQMKPSFIVWSAGYGPSPEKLARIAPGRGFTFSDGKRPLAMAQRSLQEMADLLGKQQQAKRHLAEFDALMESLRPRFVDRDDRPLLMISLLDARHVLVFGENCLFQEVLDRFGIKNAWHGEAAFWGSITVGIDRLAEFKEADVICFDHGNDREMAQLMATPLWQAMPFVRAGRFQRLPAVWFYGATLSAMHFARVLADAQGRAV
>NZ_CP048598.1|WP_015368187.1|2782867_2783665_+|Fe3+-hydroxamate-ABC-transporter-ATP-binding-protein-FhuC
MQEQTPYSETTFALNRVTFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGDVLLDGQPLDSWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAIALVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQQRGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRSETLEQIYGIPMGILPHPAGAAPVSFVY
>NZ_CP048598.1|WP_045411605.1|2780617_2782822_+|ferrichrome-porin-FhuA
MARLKTAQPNHSLRKIAVVVATAVSGMSVYAQAAEQPKEETLVVTAAPASQESAWGPAPTIAAKRSATATKTDTPIEKTPQSISVVTREEMDMKQPATVKEALSYTPSVFSTRGSSTTYDVVTIRGFTTSSTVNTNQYLDGMKLQGNNYSEVSMDPYFLERVEVMRGPTSVLYGNSNPGGIVSMVSKRPTTEPLKEVQFKMGTDNLWQTGFDFSDAIDDDGVWSYRLTGLGRSQDAQQQMAKSTRYAIAPSFSWRPDDKTDFTFLSNFQNDPDAGYYGWLPREGTVVPYYDANGKAHKLPTDFNEGESDNKMARRQQMVGYSFSHQFDDTFTVRQNLRYADVHTLYRSVYGYGYQEPGKIQRNYVRSDEHLNTFTVDTQLQSDFATGAVNHTLLTGVDYSRMRNDVDADYGTADAISMSNPQYGNPNIVLNSKYAVLNRMEQTGLYAQDQMEWDKWVMTLGGRYDYATTSTFTRSTSNMAENHDQQFSWRGGINYLFDNGISPYFSYSESFEPVSGSGLNGKPFDPSRGKQYEAGVKYVPKDMPVVVTAAVYQLTKDKNLTADPNDTSGFFSVQTGEIRSRGFELEAKAAVNANINLTAAYSYTDAEYTHDTVFEGKRPAEVPRNMASLWADYTFHETALSGLTIGAGARYIGSTVSYYKNVEGKKNDSFNVAGYALMDATVKYDLARFGLPGSSVGVNVNNLFDREYVSSCYSEYACYWGAERQVVATATFRF
>NZ_CP048598.1|WP_015368189.1|2777822_2780375_+|bifunctional-glycosyl-transferase/transpeptidase
MAGDDREPIGRKGRPSRPAKQKVTRRRVREEDYDDDYDDDYEDERPMPKKGKGKGNKPRRKRSWLWLLVKLGIVFAVIIAAYGVYLDQKIRSRIDGKVWELPAAVYGRMVNLEPDMQISKNEMVRLLNATQYRQVSAMTRPGEYTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHLDTIENMDNNRQFGFFRLDPRLITMLQSANGEQRLFVKRSGFPDLLVDTLLATEDRHFYEHDGISLYSMGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIVDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQNIIDQELYDMLSARPLGVQPRGGVISPQPAFMQMVRQELQAKLGDKVKDLSGVKIFTTFDPVAQDAAEKAAIEGIPVLKKQRKLPDLETAMVVVDRFTGEVRAMVGGAEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPNQYRLNTWIADAPVTIRLSNGQTWSPQNDDRRFSGQVMLVDALTRSMNVPTVNLGMSLGLPAITDTWQKLGVPKDQLNAVPAMILGALNLTPIEVAQAFQTIASGGNRATLSALRSVIAEDGTVLYQSYPQAERAVPAQAAYMTLWTMQQVVQRGTGRQLGAKYPGLHLAGKTGTTNNNVDTWFAGIDGSQVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLALTPPEDVVDMGVDSNGYFQCSGGMRTLPVWTTSPDALCRQGEALQQQQQQQQEANNPFNQSGQQQPANQPQQQQQQPAKQEKSDGVAGWIKDMFGGN
>NZ_CP048598.1|WP_048230633.1|2775022_2777452_+|ATP-dependent-helicase-HrpB
MSSLPVAAILPELLSALQQAPQVLLNAPTGAGKSTWLPLQILADGNIDGRIILLEPRRLAARNVAQRLAELLGEKPGETIGYRMRAESCVGPNTRLEVVTEGILTRTLQHDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQRLLPEAPVVVSEGRAFPVERRFAPLASHQRFAEAVAIAAADLLREEQGSMLLFLPGVGEIQRVQEQLSERVASDVLLCPLYGALPLSEQRKAILPAPAGMRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDPRTGLTRLITQRISQASMTQRAGRAGRLEPGICLHLLAKEQAERAAAQSDPEILQSDLSGLLLELLQWGCRDPAELRWLDLPPAINLAAARRLLTALSALEGERLSAHGRKMATLGNDPRLAAMLTAADSADDAATAAKLAAILEEPPRGGNSDLSAAFARQQGNWQQRAQQLLKRLTSRGGQPDAARMAALLAPAFADRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQGSSAPDARILLALPLDIDQLVAQRPELIQRSDTVEWDEAQGTLKAWRRSCIGQLVIKTQPLAKPSEAELHQAMLNGIRDKGLGVLNWTPEAEQLRLRLYCAAQWLPEADWPAVDDASLLASLEAWLLPQMTGVHSLRALKAVDLRQALQNWLPWTLRQKLDSELPTHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEAATPRIAEGRVPLVLELLSPAQRPLQITRDLSAFWQGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS
>NZ_CP048598.1|WP_045386052.1|2774413_2774950_-|RNA-2',3'-cyclic-phosphodiesterase
MSEPKRLFFALELPKAIQKQIIHWRATHFADDAGRPVAADNLHLTLAFLGDVSAEKQRALSAMAGRIQQPPFTLTLDDAGQWLRSRVVWLGTRQPPRGMLQLANMLRAQAARSGCYQSPQPFHPHITLLRDARHAVPIPPPGFCWQVPVNEFVLYESSFIRGRTRYNALERYPFTREL
>NZ_CP048598.1|WP_015368194.1|2773697_2774414_-|DNA/RNA-nuclease-SfsA
MLFTPPLQSATLIKRYKRFLADVITPEGQALTLHCPNTGAMTGCAAPGDTVWYSTSDNPKRKYAHTWELTETRQGAVICVNTLRANTLAKEAVLAGNIPELAGYNILKSEVKYGEENSRIDLMLQAEDRRNCYIEVKSVTLAEKEYGYFPDAVTARGQKHLRELMSVAAAGHRAVILFAVLHSAIDRFSPAHHIDAKYAQLLIEAQEKGVEILAWKAELSTKMMTLNKPIAVALTPGN
>NZ_CP048598.1|WP_007373199.1|2773078_2773534_-|RNA-polymerase-binding-protein-DksA
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFKRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGFCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG
>NZ_CP048598.1|WP_048230632.1|2772136_2773018_-|tRNA-glutamyl-Q(34)-synthetase-GluQRS
MTDSDYIGRFAPSPSGELHFGSLIAALGSYLQARAKGGIWRVRIEDIDPPREVPGAADTILRQLDRYGLHWDGEVLWQSQRHDAYRERLAWLRNRDLCYYCTCTRARIHSVGGIYDGHCRDLRLGAENAALRLRQTRPVLEFYDQLRGTLVADEPLAREDFIIHRRDGLFAYNLAVVVDDHFQGVSEIVRGADLIEPTVRQISLYQHFGWPVPDYVHLPLALNAEGNKLSKQNHAPALPEGDPRPEIVRALTFLNQDVVEDWQALSIDDLLKQAIANWQPAKIQHSQMAPAEL
>NZ_CP048598.1|WP_048230149.1|2786756_2788037_-|glutamate-1-semialdehyde-2,1-aminomutase
MSKSENLYNAARELIPGGVNSPVRAFTGVGGTPLFIERADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAELVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQDIACIIVEPVAGNMNCIPPQPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQSYYGVEPDLTCLGKIIGGGMPVGAFGGRREVMDALAPTGPVYQAGTLSGNPIAMAAGFACLSEVAQPGVHETLTELTNQLADGLLNAARETGIPLVVNNVGGMFGIFFTEAETVTCYQDVVKCDVERFKRFFHLMLEEGVYLAPSAFEAGFMSIAHSEEDINNTIDAARRVFAKL
>NZ_CP048598.1|WP_163359269.1|2788174_2789635_+|H(+)/Cl(-)-exchange-transporter-ClcA
MPLFSFVLPINDNGMKAETPSFEAHQFVRVRRSDAVRRLIQRDKTPLAVLLMAAVVGTLAGLVGVAFEKSVNWVQNQRIGALVQVADHWYLVWPLAFILSGLLAMVGYFLVRRFAPEAGGSGIPEIEGALEELRPVRWWRVLPVKFIGGMGTLGAGMVLGREGPMVQLGGNIGRMVVDVFRLRSPEARHTLLATGAASGLSAAFNAPLAGILFIIEEMRPQFRYNLISIKAVFTGVIMSSIVFRIFNGEGAIIEVGKLSNAPVNTLWLYLVLGMIFGCFGPLFNALVLRTQDTFQRFHGGNIKKWVLIGGLIGGLCGLLGLMQPTAVGGGFNLIPIAAAGNFSVGLLLFIFIARVITTLLCFSSGAPGGIFAPMLALGTLLGTAFGMAAIPLFPSYHLDAGTFAIAGMGALLAASVRAPLTGIVLVLEMTDNYQLILPMIITCLGATLLAQFLGGKPLYSTILQRTLAKQKAEEAAKAQQVPRENT
>NZ_CP048598.1|WP_015368181.1|2789716_2790061_+|iron-sulfur-cluster-insertion-protein-ErpA
MSDDVALPLEFTEAAANKVKHLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQINEGDMTIEKQGVGLVVDPMSLQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSV
>NZ_CP048598.1|WP_015704437.1|2790137_2790764_-|TRIC-cation-channel-family-protein
MLVYWLDIIGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDLVVAMVTSMLTILLVRQPRRMPKWVLPVLDAVGLAVFVGIGVNKAFIAHTGPLVAICMGVVTGVGGGIIRDVLAREVPMILRTEIYATACIVGGIVHATAHYTFQLSLENSAMLGMMVTLVIRLAAIRWHLKLPTFALDDNGRS
>NZ_CP048598.1|WP_015368179.1|2790798_2791599_-|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF
MAKSLQKALTALLLLAPAWLFAAPRVVTLSPANTELAFAAGITPVGVSSYSDYPPAAAKIEQVASWQGMNLERIVALKPDLVLAWRGGNAERQVNQLSSLGIKVIWVETGSIEQIISALRMLAPWSPQPEKARQAAQAMQDDYQALKARYANAPKKRVFLQFGANPLFTSNSASIQNQVLSLCGGENIFAASRVPWPQVSREQVLSRHPQAIVITGDASKIPAVDRYWQNQLTISLIALHSDWFERAGPRIILAAKQLCTALEQVK
>NZ_CP048598.1|WP_015704439.1|2791591_2792290_-|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase
MKIGIIGAMEEEVTLLRDKIENRQTISIGGSEIYTGQLHGTEVALLKSGIGKVAAAMGATLLLERCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAETCIKALNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAVAVEMEATAIAHVCHNFSIPFVVVRAISDVADQQSHLSFDEFLAVAAKQSTLMVENLVQNLARG
>NZ_CP048598.1|WP_032716046.1|2792373_2793888_+|dGTPase
MANIDFRNKIHWRRRYRSPQGVETEREILRVFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSLEVQQVGRYIAKEVLSRLKEQKLLECYGLDELSGPFESVVEMACLMHDIGNPPFGHFGEAAINDWFSKRLVPKDAASQPLSQDRCQVDALRLHDGEGVLNELRRKVRQDLCCFEGNAQGIRLVHTLMRMNLTWTQVGCILKYTRPAWWRGETLASHSYLMKKPGYYLAEEEYIARLRKELDLAPYNRFPLTWIMEAADDISYCVADLEDAVEKRIFSAEQLYQHLYDAWGTHEKGSLFAQVVENAWEKSRANSLSRSTEDQFFMYLRVNTLNKLVPYAAHRFIENLPAIFSGDFNHALLEDDSDCSQLLELYKNVAIKQVFSHPDVEQLELQGYRVISGLLDIYEPLLKLSLEEFSQLVEQDRVRSLPIASRLFQKLSTRHRLAYVEAVNKLSRDTEEYPVLEYYYRCRLIQDYISGMTDLYAWDEYRRLMAVE
>NZ_CP048598.1|WP_015704441.1|2794029_2795463_+|serine-endoprotease-DegP
MKKTTLAMSALALSLGLALSPLSASAAETASSATTAQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDNSPFCQDGSPFQSSPFCQGGGQGAPGDNAQQQKFMALGSGVIIDAAKGYVVTNNHVVDNATTIKVQLSDGRKFDAKVVGKDPRSDIALIQIQDPKNLTAIKLADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNVENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTEQMVKFGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVMPGSAAAKAGIKAGDVITTLNGKPISSFAALRAQVGTMPIGSKVELGLLRDGKPVNVTVELQQSNQNQVDSSSIFNGIQGAEMSNKGQDKGVVVSNVKAGTPAAQIGLKKGDIIVGANQQPVKNIADLRKIFDAKPSVLALNIQRGDTSIYLLMQ
>NZ_CP048598.1|WP_020079583.1|2795639_2796797_+|CdaR-family-transcriptional-regulator
MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPESLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALNEWAQRLGIDLNQPRVVAMIEVDSGQLGVDSAMAELQQLQTALTTPDRNNLVAIVSLTEMVVLKPALNAFGRWDADDHCKRVEQLITRMKENGQLQFRVALGNFFTGPGSIARSYRTARTTMMVGKQRMPESRSYFYQDLMLPVLLDSLRGGWQANELARPLTRLKAMDNNGLLRRTLQAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGSFDDRLLLYIALQLDEQR
>NZ_CP048598.1|WP_048230635.1|2796833_2799809_-|viral-enhancin-protein
MTQEIEQKCYTLQSATWLDKAGFEKGRKHDRQALGFILPANTVLKIRQTDLSNGISTLRLMCDDSAVEKSSALTTNWTTISTTVDSVPFVDTLFTDSPCEFSVIYQQPAATKPLPSWKSGQSEETFFVDWENNKSSFALVDLDVINLLLPYADRDNAMKAGLASLHRFYNHLFTRYNDWAGLSENPDSQWNQNVANRYFLRADKHGVGSAYYNTNWCAQTASTVGEGWLDNVATQWVILHEIGHGYQGKFMQDPTLSVSEVWNNIYASFYQQLTLSQDNHLYTDGWLYNYGKLAAQEAQLVNYITDKTPVTSWGLRSRLQFLMLMLFKAGIASFRTFNQNYRQLANSESFQPSDHQLADMLATAIATSAGYDVTPFIELCGLTLKNATRENIVSLATKPLYPLYRFLPQSEWDSARQQLGLDSFFWLVDNSELAILGKTGALTLTLNIDRPEQIYGQTLAIKDNCGNHYSLVINSDVLTLKDMPIGVYQVELPKGRSQKYRPDISYITVKEGANTVTVNYVQQNDTSERNVTISFLGYSDAPFAHLDVDYENQQLILNVTSANPHSYYPGTLYAAVSVLSANGEKVFERKMTGTNCATGKVIIPFSPHYHLYITHMEPGRLKTSPGYLTLVAREKYQLMRIDDNGLYNFILGNSPADDLEAIFEHNAQVIRTQPSLVAQEECVCKNDLWLMLPHIEEPRRSELLEAYADVLPQDNNDPGELTGKSVTLDLRGQGNNEFCQIVIDNKQRAMTVATRAGTPHSYYTTHTYASITVTAEDDTVVYQRSYTGATNNLANSETITLAEGMIIEIFHDEPYRSSATNGTTQNAVTLKQHNRWRVVKTGLEVYALAPDEPDEEATDTEEETALYGDSFSWQLLGDDDVCFAGMEMDIGSGALTFSANAVVPNKHFTTTYATVNVYNTRGSVVYRQSIKGSSQLGDYVDTAILDEGYTIEVFHAEAGNRSVIINPLNGNSWQQPNTVIWQVTPRGLQRL

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Crispr_ID: NZ_CP048598_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048598_4

3442785-3442857

Orphan

Consensus_repeat	Method
CGGGTGGCGGCTACGCCTTACCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048598_4

>merge|NZ_CP048598|4|3442785-3442857|CRISPRCasFinder
CGGGTGGCGGCTACGCCTTACCCGGGCTACCCGCGGTGCCGTTTTTTGTCGGGTGGCGGCTAACGCCTTACCC

>NZ_CP048598|4|4|3442785-3442857|CRISPRCasFinder
CGGGTGGCGGCTACGCCTTACCCG	GGCTACCCGCGGTGCCGTTTTTTGT
CGGGTGGCGGCTAACGCCTTACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048598.1\|WP_015367576.1\|3431817_3433395_-\|phosphoethanolamine-transferase	unknown	unknown	gnl\|CDD\|225105
NZ_CP048598.1\|WP_042895107.1\|3453192_3454092_-\|glycyl-radical-enzyme-activating-protein	unknown	unknown	gnl\|CDD\|274163
NZ_CP048598.1\|WP_015367569.1\|3439101_3440016_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|182341
NZ_CP048598.1\|WP_015367567.1\|3441176_3442769_+\|ABC-F-family-ATPase	unknown	unknown	gnl\|CDD\|237894
NZ_CP048598.1\|WP_020079300.1\|3438293_3439010_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP048598.1\|WP_015704835.1\|3454247_3455003_-\|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl\|CDD\|180204
NZ_CP048598.1\|WP_015704832.1\|3448385_3449651_-\|DUF1479-domain-containing-protein	unknown	unknown	gnl\|CDD\|369327
NZ_CP048598.1\|WP_015367575.1\|3433663_3433789_-\|manganase-accumulation-protein-MntS	unknown	unknown	gnl\|CDD\|380222
NZ_CP048598.1\|WP_020079302.1\|3434439_3435552_+\|anion-transporter	unknown	unknown	gnl\|CDD\|238537
NZ_CP048598.1\|WP_163359296.1\|3443338_3445702_-\|glycoside-hydrolase-family-31-protein	unknown	unknown	gnl\|CDD\|224418
NZ_CP048598.1\|WP_045411194.1\|3449790_3450606_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|272905
NZ_CP048598.1\|WP_015367574.1\|3433975_3434443_+\|manganese-binding-transcriptional-regulator-MntR	unknown	unknown	gnl\|CDD\|182927
NZ_CP048598.1\|WP_015704827.1\|3436856_3438233_+\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NZ_CP048598.1\|WP_042895102.1\|3456417_3457359_+\|beta-aspartyl-peptidase	unknown	unknown	gnl\|CDD\|182319
NZ_CP048598.1\|WP_047054316.1\|3440214_3440997_-\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379135
NZ_CP048598.1\|WP_047036390.1\|3435659_3436700_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381317
NZ_CP048598.1\|WP_048230725.1\|3445717_3447019_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP048598.1\|WP_020079297.1\|3447315_3448389_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP048598.1\|WP_015367558.1\|3455002_3456238_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|182643
NZ_CP048598.1\|WP_042895110.1\|3450756_3453189_-\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	unknown	unknown	gnl\|CDD\|273798

Protein	Function_ID	Function_description	E-value
NZ_CP048598.1\|WP_015367576.1\|3431817_3433395_-\|phosphoethanolamine-transferase	gnl\|CDD\|225105	COG2194, COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only].	1.29602e-111
NZ_CP048598.1\|WP_042895107.1\|3453192_3454092_-\|glycyl-radical-enzyme-activating-protein	gnl\|CDD\|274163	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA), benzylsuccinate synthase (BssD), gycerol dehydratase (DhaB2) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines.	1.89076e-138
NZ_CP048598.1\|WP_015367569.1\|3439101_3440016_-\|L,D-transpeptidase	gnl\|CDD\|182341	PRK10260, PRK10260, L,D-transpeptidase; Provisional.	0
NZ_CP048598.1\|WP_015367567.1\|3441176_3442769_+\|ABC-F-family-ATPase	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP048598.1\|WP_020079300.1\|3438293_3439010_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	2.7643e-63
NZ_CP048598.1\|WP_015704835.1\|3454247_3455003_-\|molybdopterin-synthase-adenylyltransferase-MoeB	gnl\|CDD\|180204	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional.	0
NZ_CP048598.1\|WP_015704832.1\|3448385_3449651_-\|DUF1479-domain-containing-protein	gnl\|CDD\|369327	pfam07350, DUF1479, Protein of unknown function (DUF1479). This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.	0
NZ_CP048598.1\|WP_015367575.1\|3433663_3433789_-\|manganase-accumulation-protein-MntS	gnl\|CDD\|380222	NF033226, small_MntS, manganase accumulation protein MntS. Members of this family are MntS, a small protein of about 42 amino acids that seems to play assist bacteria in accumulating manganese when iron is limiting. It may function as a manganese chaperone, or may inhibit manganese efflux transporters.	8.63856e-23
NZ_CP048598.1\|WP_020079302.1\|3434439_3435552_+\|anion-transporter	gnl\|CDD\|238537	cd01117, YbiR_permease, Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate sodium, sulfate, arsenite and organic anions. A typical ArsB/NhaD permease is composed of 8-13 transmembrane domains.	4.20408e-91
NZ_CP048598.1\|WP_163359296.1\|3443338_3445702_-\|glycoside-hydrolase-family-31-protein	gnl\|CDD\|224418	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism].	0
NZ_CP048598.1\|WP_045411194.1\|3449790_3450606_-\|HAD-family-hydrolase	gnl\|CDD\|272905	TIGR00099, Uncharacterized_protein_MCAP_0867, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. [Unknown function, Enzymes of unknown specificity].	4.20487e-67
NZ_CP048598.1\|WP_015367574.1\|3433975_3434443_+\|manganese-binding-transcriptional-regulator-MntR	gnl\|CDD\|182927	PRK11050, PRK11050, manganese-binding transcriptional regulator MntR.	4.05373e-90
NZ_CP048598.1\|WP_015704827.1\|3436856_3438233_+\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	2.47116e-157
NZ_CP048598.1\|WP_042895102.1\|3456417_3457359_+\|beta-aspartyl-peptidase	gnl\|CDD\|182319	PRK10226, PRK10226, isoaspartyl peptidase; Provisional.	0
NZ_CP048598.1\|WP_047054316.1\|3440214_3440997_-\|tyrosine-protein-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	1.64834e-72
NZ_CP048598.1\|WP_047036390.1\|3435659_3436700_+\|aldo/keto-reductase	gnl\|CDD\|381317	cd19091, AKR_PsAKR, Polaromonas Sp. aldo-keto reductase and similar proteins. The prototype of this family is an uncharacterized aldo-keto reductase from Polaromonas sp.	0
NZ_CP048598.1\|WP_048230725.1\|3445717_3447019_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.90692e-74
NZ_CP048598.1\|WP_020079297.1\|3447315_3448389_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	8.79663e-60
NZ_CP048598.1\|WP_015367558.1\|3455002_3456238_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|182643	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional.	0
NZ_CP048598.1\|WP_042895110.1\|3450756_3453189_-\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	gnl\|CDD\|273798	TIGR01774, Putative_formate_acetyltransferase_3, glycyl radical enzyme, PFL2/glycerol dehydratase family. This family previously was designated pyruvate formate-lyase, but it now appears that members include the B12-independent glycerol dehydratase. Therefore, the functional definition of the family is being broadened. This family includes the PflF and PflD proteins of E. coli, described as isoforms of pyruvate-formate lyase found in a limited number additional species. PFL catalyzes the reaction pyruvate + CoA -> acetyl-CoA + formate, which is a step in the fermentation of glucose.	0

>NZ_CP048598.1|WP_015367567.1|3441176_3442769_+|ABC-F-family-ATPase
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIADLQAFVSRFSANASKSRQATSRARQIDKIKLDEVKASSRQNPFIRFEQDKKLFRNALEVEALAKGFDNGPLFKGVNLLLEVGEKLAVLGTNGVGKSTMLKTLVGELEADNGTVKWSENARIGYYAQDHAEDFENDLTVFDWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMALEMYQGTLIFVSHDREFVSSLATRVLEITPERVIDFSGNYEDYLRSKGIE
>NZ_CP048598.1|WP_047054316.1|3440214_3440997_-|tyrosine-protein-phosphatase
MTTRTSHPAFISLQGGINFRDLGGQRAADGRRVRSGKLLRSGSLHNMTPEDLNHLSAIPLSRVLDYRDPTEVNRSPDRLNSEAFYLNAPANPLSSSVNAKVTEFNAATLNTMDGEQFMLQLYRQLPFNNAAYRQLTQWLMEPFDGALLQHCAVGKDRTGVGCALTLFALGCDSNTVMEEYLLTQGMLAQVEGFLLDTFGEGLNEHGRKNLAAIMTVQESYLATALSSIEQHYGHVDRWLEQEYRLTPQAREALQSRLLED
>NZ_CP048598.1|WP_015367569.1|3439101_3440016_-|L,D-transpeptidase
MKLSTLLAAAFAIVGFCNTASAVTYPLPTDGSRLIGQNQVITIPDDNKQPLEYFAAKYQMGLSNMLEANPGVDTYLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYAAEGNPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFENVPVGTRVQFIDEPVKATTEPDGSRYVEVHNPLSTTEAQFKGGEIVPISLTQAVQSVTSQPDVDQSVMDQAIQNRSGMPVRLN
>NZ_CP048598.1|WP_020079300.1|3438293_3439010_+|GntR-family-transcriptional-regulator
MTAKYLNIAREIKKRIISQQYPASAPLPDQFALAAEFNTSRMTIQQAMRQLIVEGLIYTRKGQGTFVRKNFLQLSQWELPGSDYFGATKTWEHLGEVQSEVVRFELRFPSEKEQSSLLIDADAPVYDFVRLRLLNGEPISLDLTVMPVALVPGLNKSHLQSSVFRYVQETLGLKLMGSYRVVRAMKPDELDKLHLNCEPTDPVLEVEQVIYLEDGTPLEYAHCHYRYDHGGVILVNNG
>NZ_CP048598.1|WP_015704827.1|3436856_3438233_+|glycoside-hydrolase-family-1-protein
MKDKLPANFLWGNSVSSMQTEGAWNEGGKGMSVYDIREPSEFASDWKVATDSYHRFREDFDLMQDLGMNCYRFQIAWSRVCPQGDGEFNEEGIAFYHQFIDELIARGIEPMICLYHFDMPLSLAERYNGFTDRRVMDAFIRYGQKMIDCYGDKVKYWLTFNEQNLYHSPEAFLITGYLRGDKTLRELYQIQHHVMMAHVHLTDYLHQAKPQCLMGGMLAHALVYPATCKPRDILCAQQLDEFLNQNLLRAYAGEGYSPEVMHFVAREGFDDIYRPEDIALMARVKVDYLAFSYYASRTLNSDAIPPGTAVNNYMLFGNQDNPYLKATEWNWQIDPLGFRTIITRYYNDWRLPVFPIENGIGVIESWDGENQVADDYRIAYHRDHINAMKAAMFEDGAQVIGYLGWGLIDILSSQGDMRKRYGVVYVNRENHDLKDLKRVPKKSYAWLKRVIHSNGEEM
>NZ_CP048598.1|WP_047036390.1|3435659_3436700_+|aldo/keto-reductase
MRYQKLGNTGLFVSELCLGTMTFGGEEGMWGKIGQLRQAEAEQLVGSALDAGINFIDTANVYSEGRSEEITGQALKNLKIPRENVVVATKVFGETGTAGVNSRGSSRYHIMGSVKESLRRLQLDHIDLYQLHGFDPATPIEETLSALDTLVQQGHVRYIGVSNWAAWQIAKALGIAERLGLSRFASLQAYYTIAGRELERELVPMMQSEGLGLMVWSPLAGGLLSGKYRRDGQAEAGGRRLEFDFPPVNKDRAFDCIDVMQVIAEAKGVSVAQIALAWLLHQTAVTSVIIGAKRAEQLQDNIAATAIRLSEDELRQLDAVSALPREYPGWMLERQGEYRRKQLDAQ
>NZ_CP048598.1|WP_020079302.1|3434439_3435552_+|anion-transporter
MNLPFVQSLARDRFLHLLLLIAVILSLFVPFAPQRWGQAIDWHTIITLSGLMLLTKGIELSGYFDVLGRKMARRFVTERQLAIFMVLAAALLSTFLTNDVALFIVVPLTLTLKKWCAIPVNRLIIFEALAVNAGSLLTPIGNPQNILLWGRSGLSFLAFIGQMLPLAAAMMITLLVLCWFCFPAARLNYQSSDKAPEWRPQLVWSCLAFYLIFLAALEMKQELWGLALIAVGFLLLARAVIINVDWSLLLVFMAMFIDVHLLTQLPVLQQWLNGVGQLSHGGLWLTAIGLSQFISNVPSTILLLNYVPPTMLLAWAVNVGGFGLLPGSLANLIALRMAGDRRIWWRFHLYSIPLLIWAALTGYAMLALWR
>NZ_CP048598.1|WP_015367574.1|3433975_3434443_+|manganese-binding-transcriptional-regulator-MntR
MNRRAGKPITKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLINEVGEARQVDMAARLGVSQPTVAKMLKRLASVGLIEQIPWRGIFLTPEGEKLAHESRERHQIVENFLLAIGVSPEIARRDAEGMEHHVSEETLAQFKLFTQRLHAE
>NZ_CP048598.1|WP_015367575.1|3433663_3433789_-|manganase-accumulation-protein-MntS
MNEFKRCLNVFSHSPFKVRLMLIGMLCDMINGKPQQDKPNH
>NZ_CP048598.1|WP_015367576.1|3431817_3433395_-|phosphoethanolamine-transferase
MNVTLKETLAARRLALNPWTGFYFLQSLLINLALGYEFSLLYTIAFTCVLHLLWRTFPRVQKGIVGLYSLLAAMYYPFGQAYGAPNFNTLLALHATNVEESTEILTIFPWYNYLLAVFIFALGVIAVRRKPQPPARLGKVEYLGLLFSIGIFFLQPVQNLAWGGVFKVIDSGYPAVRFVKDVIVNNNEVLDEQARMAQLANMKDSWHVLAVKPKYHLYVVVIGESARRDALGAFGGHWDNTPFASSVNGYLFKNYVAASGSTQKSLGLTLNRVVDGKPQYQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVQFLKNGDFEANKNTQDEQLLKLTEQVLSVERSQPQLIVLHIMGSHPQACDRTKGKYTTFVQSKETSCYLYSVTQTDALLAKLYGQLQNSGSSFSLTYFSDHGLAFKERGKAVQYLAHDDKYQQNFQVPFMVLSSDDKAHKMIKARRSANDFLSFFSQWTGISAQEITPRYRFISEQKAGPVYITNFQLQKVDYNHLGSDEFTVN
>NZ_CP048598.1|WP_163359296.1|3443338_3445702_-|glycoside-hydrolase-family-31-protein
MKTLKHWSLHQQLEHHVELTVDGQHTLCLYVLEENLFRVLLKRQGQLALDRTWSIAPQQDVPWEGRARDDLSGFSLPAWQMSESDDTLTIATRQLRVTVHQPLWLEWSYRDEAGEWQTLANDRPTSAYLANAHGDGVAHYLSRRKDERFYGLGEKAGDLQRNGKRYEMRNLDAMGYNAVSTDPLYKHIPFTITQRSDISYGLFYDNLSSCWLDLGNEIDNYHTAYRRWQAEAGDIDYYLFTGKQVLDVTKAFVRLTGKTLFGPKWSLGYSGSTMHYTDAPDAQNQLMNFIRLCEQHAIPCDSFQLSSGYTSINGKRYVFNWNYDKVPQPKVMSQSFHDAGLKLAANIKPCLLQDHPRYGEVAECGLFIRDSQTDAPERSSFWDDEGSHLDFTNPHTVTWWQEGVTTQLLEMGIDSTWNDNNEYEVWDGEARCYGFGREIAIKHIRPVMPLLMMRASLEAQQRFAPQKRPYLISRSGCAGMQRYVQTWSGDNRTNWDTLRYNTRMGLGMSLSGLFNVGHDVGGFSGDKPEPELFVRWVQNGVMHPRFTIHSWNDDQTVNEPWMYPEITPAIRSAIELRYRLLPYLYTLLWQAHADDEPMLRPTFLDHQHDTQTFAECDDFMLGRDLLVASVVEPGARQRQLWLPDNQDGWYDFYNHQWFAGGQWVTLDAPLEKLPLLVRAGAGLPLSERISHVDAQKDDRRELQLFPLKGTGSTRGLLFEDDGESWGYKEGDALWLEWEMTCSANSINLKLDARGNYRPAWKALKLSLPAGEKRQLLVNGVEGTEWRL
>NZ_CP048598.1|WP_048230725.1|3445717_3447019_-|MFS-transporter
MSQGLNNDMAVSKTRRVVKNLRWWVLVLFLLGVTVNYITRNSLGIIAPELKATLGITTEQYSWIVGAFQLAYTIFQPLCGWLIDVIGLKLGFMVCATLWAVACIAHAGAGSWLHLAILRFFMGGAEAAATPANAKTIGEWFPKSERPIAAGWAGVGFSIGAMLAPPIIYFAHASFGWQGAFMFTGVLALLWVVLWWAFYQSPEKHPNLSKSELEYIKQDNEAPPVKLPFFTALKTVSKNKRFYGIAIPAFMAEPAWAVLSFWVPLYLAKEHGMDLKQIAMFAWLPFLAADLGSVVSGYLTRLYVRWFGCTRVNSVIASSVTGAFLMLSLALVAITRDPYITIILISIGGFGHQIISCMLSALVVESFDKGQMATVNGMRGSAAWIASFLFSLLIGVTADKIGFNPLFIAMGFFDLIGAVFLVAFIAERRAKRA
>NZ_CP048598.1|WP_020079297.1|3447315_3448389_+|LacI-family-transcriptional-regulator
MDKKLRVAEIAARTGLSASTVSRVLAGKANTSEKARQAVLACARELGVMQGLAAGRLLLNNLLIFAPQRAFDERSDIFYYRVIQSINNALAPHEVRLRYCALEENDSDANLFLARMNETDTQAAVLLGIDDRHIHALAADLGKPCVLINCRDEGMRLPSIAPDHRLIGQCAARYLFDMGHQAVMNVMCLRRYTMELRLVGIKEAWRARNLRFTGSRDLISVANFSARETEEQVGAWLDALQGRPMPTAFLVGGDFMAAGTVSALQKRGLRVPQDVSVMSIDGFNLAAIQDVPLTAIHVPRDELGSEAVHLLQQRLLRPEAPHGSLLLHGALVVRDSVRRIRPGKSHTAVEQQGLYDD
>NZ_CP048598.1|WP_015704832.1|3448385_3449651_-|DUF1479-domain-containing-protein
MAALPTHETLPADHKAAIRQMKQALRAQIGDVQAVFDKLSARISERLDEINALKAAGQEVWPTIPFSDIAQGKVSDAQREAIKRRGCAVIKGHYPREQALAWDNAMLEYLDLNHFDDVYKGPGDSFFGSLEASRPEIYPIYWSPSQMQARQSDEMAAVQSFLNRLWRFEQDGKRWFDPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQQVFANVFNGNIDAYDPWDAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMIPGQGLLHVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGKVLPISEQWHPLLIKALSSIPALNAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAQKVKIALEKGASPGDFPREDYECDWQARFTVADLNDHGKRALGMKI
>NZ_CP048598.1|WP_045411194.1|3449790_3450606_-|HAD-family-hydrolase
MTVKVIVTDMDGTFLNDAKQYDRPRFLAQFAQLKQQGIEFVVASGNQYYQLISFFPEIREQISFVAENGALVYEHGKQVFHGELTRHESQVVIGELLKDPQLNFVACGLQSAYVSDKAPDAFVELMSKHYHRLQRVSDYHSIDDTLFKFSLNLPDSDIPQLIDKLHVSLDGIMKPVTSGFGFVDLIIPGLHKANGISRLLKRWNLSPQQCVAIGDSGNDAEMLKLVKYAFAMANAADSIKAIAGFTTDDNNHDGALKVIQAVLDKTSPFND
>NZ_CP048598.1|WP_042895110.1|3450756_3453189_-|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme
MTTLKLDTLSARIQAHKMALVHIVKPPVCTERAQHYTAAYQQHLDKPIPVRRALALAHHLAERTIWIKHDELIVGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMTSGDAHLAVNYPLLLEKGLDGMRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLAAVSEHCKRFATLARDMAAQEPRELRRDELLAIAENCEIIAHQPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELQQSLDREQAIELLHCCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPQDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQVFLAQQHALSKGNFANFDQVLEDWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFDQGVIGQQELAKALAEDFAGLTHEQLRQRLINGAPKYGNDDDSVDILLARAYQTYIDELKQYHNPRYGRGPIGGNYYAGTSSISANVPFGAQTMATPDGRKAHAPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGGVLLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDTQDDIIARTEHTL
>NZ_CP048598.1|WP_042895107.1|3453192_3454092_-|glycyl-radical-enzyme-activating-protein
MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARSEDLLYDARLCLDGCELCQQAAPEVITRTLDGLIIHRQNVNDSHIAALRHCCPTTALTVCGEEKSVTEIMATVLRDKPFYDRSGGGITLSGGEPFMNPALAQALFEASHQAGIHTAVETCLHVPWKYIEPSLPFVDLFLADLKHVDEAVFQQWTDGSARRVLDNLQRLAQAGKKIIIRVPLIQGFNASEADITAITDFAADRLQVSEIHFLPYHTLGMNKYQLLSQPYTAPDKPLAAPELLAFAQQYAQSKGLTATLRG
>NZ_CP048598.1|WP_015704835.1|3454247_3455003_-|molybdopterin-synthase-adenylyltransferase-MoeB
MAVELSDEEMLRYNRQIVLRGFDFDGQERLKAARVLVVGLGGLGCAAAQYLAAAGVGQLTLLDFDTVSLSNLQRQTLHSDATIGQPKVDSARDALARINPHVRLVTIDAMLDDAALATQIADHHLVLDCTDNVAVRNQLNAGCFQHKTPLISGAAIRMEGQISVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLVGTIGSLQAMEAIKLLTGYGTPARGKIVMYDAMTCQFREMKLMRHPQCEVCGSR
>NZ_CP048598.1|WP_015367558.1|3455002_3456238_-|molybdopterin-molybdotransferase-MoeA
MDFTAGLMPLDTALTQMLDRISPLQATETLPLLQAFSRVTAHDVVSPLDVPGFDNSAMDGYAVRLADLTDGAALPVAGKAFAGQPFHDAWPAGTCIRIMTGAPVPEGCDAVVMQEETEQTDAGVRFIAPVKAGQNIRRRGEDIANGAVVFPAGTRLTVAELPVLASLGIADVEVVRKVRVAVFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIPDDPAKLRDAFIAADQQADVVISSGGVSVGEADYTKTILEELGEIGFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNRGQTQPMRLRVRAASRLKKSPGRLDFQRGVLQRNPEGELVVSTTGHQGSHIFSSFSLGNCFIVLERERGNVEAGEWVEVEPFNHLFGGL
>NZ_CP048598.1|WP_042895102.1|3456417_3457359_+|beta-aspartyl-peptidase
MGKAVIAIHGGAGAISRAQMTQAREREYVAALSAIVDSGQKMLAAGASALDAVTEAVRLLEECPLFNAGIGSVFTHDQTHELDACVMDGYSLQAGAVAGVKHLRNPVLAARLVLEESPHVLLIGEGAEKFAASRGMALVENELFSTTERLLQLQQAKEGGEIILDHHAAPLDERHKMGTVGAVALDLAGNLAAATSTGGMTNKLPGRVGDSPVPGAGCYANNASVAVSCTGTGEVFMRTLAAYDISALMEYGNLSLFEACERVVQEKLPALGGSGGLIAIDREGNVVLPFNCEGMYRAWCYAGDTPTIGIYRE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP048598_4	4.1\|3442809\|25\|NZ_CP048598\|CRISPRCasFinder	3442809-3442833	25	NZ_CP048598.1	2365268-2365292	1	0.96
NZ_CP048598_4	4.1\|3442809\|25\|NZ_CP048598\|CRISPRCasFinder	3442809-3442833	25	NZ_CP048598.1	1462343-1462367	1	0.96
NZ_CP048598_4	4.1\|3442809\|25\|NZ_CP048598\|CRISPRCasFinder	3442809-3442833	25	NZ_CP048598.1	2172398-2172422	1	0.96
NZ_CP048598_3	3.1\|2786646\|33\|NZ_CP048598\|CRISPRCasFinder	2786646-2786678	33	NZ_CP048598.1	4906169-4906201	2	0.939

1. spacer 4.1|3442809|25|NZ_CP048598|CRISPRCasFinder matches to position: 2365268-2365292, mismatch: 1, identity: 0.96

ggctacccgcggtgccgttttttgt	CRISPR spacer
ggctacccgcggtgtcgttttttgt	Protospacer
**************.**********

2. spacer 4.1|3442809|25|NZ_CP048598|CRISPRCasFinder matches to position: 1462343-1462367, mismatch: 1, identity: 0.96

ggctacccgcggtgccgttttttgt	CRISPR spacer
ggctacccgcggtaccgttttttgt	Protospacer
*************.***********

3. spacer 4.1|3442809|25|NZ_CP048598|CRISPRCasFinder matches to position: 2172398-2172422, mismatch: 1, identity: 0.96

ggctacccgcggtgccgttttttgt	CRISPR spacer
ggctactcgcggtgccgttttttgt	Protospacer
******.******************

4. spacer 3.1|2786646|33|NZ_CP048598|CRISPRCasFinder matches to position: 4906169-4906201, mismatch: 2, identity: 0.939

cggtggcgctagtgcttaccggggctacagcgc	CRISPR spacer
cggtggcgctggcgcttaccggggctacagcgc	Protospacer
**********.*.********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048598_4	4.1\|3442809\|25\|NZ_CP048598\|CRISPRCasFinder	3442809-3442833	25	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	323589-323613	2	0.92
NZ_CP048598_4	4.1\|3442809\|25\|NZ_CP048598\|CRISPRCasFinder	3442809-3442833	25	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	324019-324043	2	0.92
NZ_CP048598_3	3.1\|2786646\|33\|NZ_CP048598\|CRISPRCasFinder	2786646-2786678	33	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	99081-99113	3	0.909
NZ_CP048598_4	4.1\|3442809\|25\|NZ_CP048598\|CRISPRCasFinder	3442809-3442833	25	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	447689-447713	3	0.88
NZ_CP048598_3	3.1\|2786646\|33\|NZ_CP048598\|CRISPRCasFinder	2786646-2786678	33	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	323506-323538	4	0.879
NZ_CP048598_4	4.1\|3442809\|25\|NZ_CP048598\|CRISPRCasFinder	3442809-3442833	25	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	447528-447552	4	0.84
NZ_CP048598_3	3.1\|2786646\|33\|NZ_CP048598\|CRISPRCasFinder	2786646-2786678	33	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	583050-583082	6	0.818

1. spacer 4.1|3442809|25|NZ_CP048598|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 2, identity: 0.92

ggctacccgcggtgccgttttttgt	CRISPR spacer
atctacccgcggtgccgttttttgt	Protospacer
. ***********************

2. spacer 4.1|3442809|25|NZ_CP048598|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 2, identity: 0.92

ggctacccgcggtgccgttttttgt	CRISPR spacer
ggctacccgcggtgccgtttttttg	Protospacer
***********************

3. spacer 3.1|2786646|33|NZ_CP048598|CRISPRCasFinder matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 3, identity: 0.909

cggtggcgctagtgcttaccggggctacagcgc-	CRISPR spacer
cggtggcgctagcgcttaccggggctac-gcact	Protospacer
************.*************** **.*

4. spacer 4.1|3442809|25|NZ_CP048598|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 3, identity: 0.88

ggctacccgcggtgccgttttttgt	CRISPR spacer
cactactcgcggtgccgttttttgt	Protospacer
 .****.******************

5. spacer 3.1|2786646|33|NZ_CP048598|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.879

cggtggcgctagtgcttaccggggctacagcgc	CRISPR spacer
cggtggcgctaccgcttaccggggctacaacac	Protospacer
*********** .****************.*.*

6. spacer 4.1|3442809|25|NZ_CP048598|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 4, identity: 0.84

ggctacccgcggtgccgttttttgt	CRISPR spacer
cgctactcgcggtgccgtttttttg	Protospacer
 *****.****************

7. spacer 3.1|2786646|33|NZ_CP048598|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.818

cggtggcgctagtgcttaccggggctacagcgc	CRISPR spacer
cggtggcgctaacgcttaccggggctaccaacc	Protospacer
***********..*************** .  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4688372 : 4693732

Escherichia_phage(50.0%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032714650.1\|4688372_4689518_+	porin OmpC	Q1MVN1	Enterobacteria_phage	1.4e-120	59.9
WP_015366316.1\|4689662_4690097_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.8e-28	50.0
WP_042894575.1\|4690333_4690630_+	hypothetical protein	A0A222YWE2	Escherichia_phage	4.0e-40	77.9
WP_032711784.1\|4690687_4691023_+	HigA family addiction module antidote protein	A0A222YWD7	Escherichia_phage	2.4e-41	76.8
WP_032711785.1\|4691375_4692311_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.5e-138	93.0
WP_048231211.1\|4692358_4693732_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	8.6e-53	32.3

DBSCAN-SWA_2

4766744 : 4818056

Klebsiella_phage(18.0%)

holin,integrase,terminase,coat,tail

attL 4751926:4751941|attR 4815362:4815377

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4751926:4751941	attL	NA	NA	NA	NA
WP_100279726.1\|4766744_4767497_-	hypothetical protein	A0A286S1R5	Klebsiella_phage	9.2e-49	45.7
WP_045419353.1\|4769495_4772531_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	67.8
WP_045419356.1\|4772527_4772908_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	8.5e-59	80.2
WP_045419358.1\|4772917_4773400_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	7.9e-62	73.8
WP_032712199.1\|4773386_4773860_-	hypothetical protein	A0A286S298	Klebsiella_phage	3.1e-58	67.1
WP_047075692.1\|4773859_4776808_-\|tail	tail protein	A0A2H4J107	uncultured_Caudovirales_phage	1.7e-101	36.9
WP_032712205.1\|4776927_4777260_-	lipoprotein	M1PRT9	Cellulophaga_phage	2.9e-31	66.7
WP_123273243.1\|4777326_4777524_-	hypothetical protein	NA	NA	NA	NA
WP_045419368.1\|4777661_4778144_-	hypothetical protein	NA	NA	NA	NA
WP_042896383.1\|4778198_4779371_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	6.5e-25	27.9
WP_045419371.1\|4779394_4779787_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_045419374.1\|4779783_4780335_-	hypothetical protein	G8C7Q1	Escherichia_phage	1.1e-27	39.8
WP_045419377.1\|4780336_4780720_-	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	6.0e-20	44.4
WP_163359341.1\|4780706_4780940_-	hypothetical protein	A0A1V0E8A3	Vibrio_phage	3.8e-09	49.2
WP_045419381.1\|4780941_4781352_-	hypothetical protein	A0A0H5AUF0	Pseudomonas_phage	2.3e-09	39.7
WP_045419383.1\|4781355_4781568_-	hypothetical protein	G8C7P8	Escherichia_phage	8.1e-11	55.2
WP_045419385.1\|4781607_4782744_-\|coat	coat protein	G8C7P7	Escherichia_phage	5.7e-159	75.9
WP_045419387.1\|4782831_4783596_-	hypothetical protein	G8C7P6	Escherichia_phage	9.9e-75	58.7
WP_045419389.1\|4783701_4784814_-	phage Mu F like family protein	I6PD76	Cronobacter_phage	2.0e-108	53.6
WP_045419392.1\|4784797_4786222_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	3.4e-193	71.7
WP_045419394.1\|4786226_4787531_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.7e-144	59.8
WP_047075691.1\|4787508_4788501_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	6.3e-29	34.5
WP_045419398.1\|4788595_4788853_-	hypothetical protein	NA	NA	NA	NA
WP_045419402.1\|4788938_4789184_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	6.3e-31	91.0
WP_045419407.1\|4790128_4790404_-	hypothetical protein	G8C7W1	Escherichia_phage	1.7e-16	52.2
WP_163359342.1\|4790406_4790748_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	1.2e-43	85.8
WP_045419413.1\|4790744_4791287_-	hypothetical protein	A0A286N2Q6	Klebsiella_phage	3.1e-70	70.2
WP_131645981.1\|4791283_4791583_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	6.7e-43	88.9
WP_047075687.1\|4792012_4792300_+	hypothetical protein	NA	NA	NA	NA
WP_149270982.1\|4792372_4793062_-	antiterminator	I6PDF8	Cronobacter_phage	4.0e-59	53.6
WP_149270984.1\|4793058_4793199_-	YlcG family protein	NA	NA	NA	NA
WP_149270986.1\|4793195_4793561_-	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	1.3e-51	82.9
WP_110915971.1\|4793553_4794003_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	7.0e-36	50.7
WP_023282492.1\|4794238_4794493_-	hypothetical protein	NA	NA	NA	NA
WP_163359343.1\|4796361_4797495_-\|tail	tail fiber domain-containing protein	A0A1Z1LXX7	Serratia_phage	5.2e-19	28.5
WP_163359344.1\|4797698_4797941_-	hypothetical protein	NA	NA	NA	NA
WP_149270992.1\|4797937_4798432_-	hypothetical protein	A0A2H4J4Q4	uncultured_Caudovirales_phage	1.5e-44	56.6
WP_072383701.1\|4798850_4799144_-	protein ren	M1FPD5	Enterobacteria_phage	3.4e-23	60.2
WP_149270994.1\|4799140_4799842_-	Replication protein P	A0A0M3ULE2	Salmonella_phage	4.6e-103	80.4
WP_149270995.1\|4799838_4800771_-	replication protein	A0A077KB11	Edwardsiella_phage	5.7e-56	79.5
WP_047075676.1\|4800955_4801498_-	hypothetical protein	M9NZI6	Enterobacteria_phage	3.9e-81	86.1
WP_072057792.1\|4801625_4801832_-	hypothetical protein	A4KWW0	Enterobacteria_phage	8.1e-16	69.8
WP_047075674.1\|4801933_4802647_+	LexA family transcriptional regulator	A4KWV9	Enterobacteria_phage	2.4e-91	70.0
WP_047075673.1\|4802882_4803632_+	hypothetical protein	NA	NA	NA	NA
WP_045412080.1\|4803628_4804456_+	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_072057791.1\|4805068_4805431_+	antitermination protein	C6ZR44	Salmonella_phage	9.6e-44	70.8
WP_155957559.1\|4805417_4805753_-	hypothetical protein	NA	NA	NA	NA
WP_155957558.1\|4805749_4806055_-	hypothetical protein	NA	NA	NA	NA
WP_131618409.1\|4806604_4806829_-	hypothetical protein	NA	NA	NA	NA
WP_163359345.1\|4806827_4807034_+	cell division inhibitor protein	K7P6H3	Enterobacteria_phage	9.6e-25	75.0
WP_163359346.1\|4807104_4808076_+	hypothetical protein	M9P0E1	Enterobacteria_phage	1.7e-50	73.9
WP_047075669.1\|4808084_4808282_+	hypothetical protein	NA	NA	NA	NA
WP_160310361.1\|4808278_4808437_+	hypothetical protein	B8K1E0	Salmonella_phage	7.6e-06	52.2
WP_047075668.1\|4808433_4809159_+	recombinase	B8K1D9	Salmonella_phage	4.1e-86	65.3
WP_047075667.1\|4809159_4809627_+	single-stranded DNA-binding protein	A0A2H4JHK3	uncultured_Caudovirales_phage	3.8e-45	67.1
WP_047075666.1\|4809641_4809926_+	hypothetical protein	NA	NA	NA	NA
WP_163359347.1\|4809939_4810599_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.5e-114	86.8
WP_163359348.1\|4810595_4811054_+	HNH endonuclease	G9FH70	Rhodococcus_phage	2.8e-24	42.4
WP_163359349.1\|4811034_4812015_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	1.3e-143	67.0
WP_047076778.1\|4812011_4812230_+	hypothetical protein	NA	NA	NA	NA
WP_047076777.1\|4812226_4812916_+	hypothetical protein	M1F3E2	Salmonella_phage	1.8e-43	44.9
WP_047076775.1\|4813133_4813355_+	TraR/DksA family transcriptional regulator	Q9ZXI6	Pseudomonas_virus	3.9e-08	46.8
WP_047076774.1\|4813357_4813699_+	hypothetical protein	I3PV00	Vibrio_phage	2.2e-21	50.9
WP_163359350.1\|4813998_4815216_-\|integrase	tyrosine-type recombinase/integrase	K7PGY1	Enterobacteria_phage	1.4e-118	51.6
WP_015366244.1\|4815362_4816253_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
4815362:4815377	attR	NA	NA	NA	NA
WP_015366243.1\|4816252_4817245_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	1.6e-08	26.1
WP_032714707.1\|4817246_4818056_+	peptide ABC transporter ATP-binding protein SapF	G3M9Y6	Bacillus_virus	1.0e-13	27.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048598

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection