CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048630	Ancylobacter pratisalsi strain DSM 102029 chromosome, complete genome	1 crisprs	DEDDh,WYL,csa3	0	0	7	0
NZ_CP048631	Ancylobacter pratisalsi strain DSM 102029 plasmid pLGM, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048630_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048630_1

3292844-3292933

Orphan

Consensus_repeat	Method
CTCACCGCCGCCGAGATCGCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048630_1

>merge|NZ_CP048630|1|3292844-3292933|CRISPRCasFinder
CTCACCGCCGCCGAGATCGCCCGGCTCGATGCCGCCAGTGCCTGGAAGGACTGATATGATGAGCACGCTCACCCCCGCCGAGATCGCCCG

>NZ_CP048630|1|1|3292844-3292933|CRISPRCasFinder
CTCACCGCCGCCGAGATCGCCCG	GCTCGATGCCGCCAGTGCCTGGAAGGACTGATATGATGAGCACG
CTCACCCCCGCCGAGATCGCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048630.1\|WP_163076088.1\|3283893_3284961_-\|quinolinate-synthase-NadA	unknown	unknown	gnl\|CDD\|236489
NZ_CP048630.1\|WP_163076093.1\|3289162_3289774_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP048630.1\|WP_163076098.1\|3295502_3296747_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|170080
NZ_CP048630.1\|WP_163076094.1\|3289770_3290328_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|224187
NZ_CP048630.1\|WP_163077698.1\|3287515_3288352_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381364
NZ_CP048630.1\|WP_163076097.1\|3294774_3295503_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP048630.1\|WP_163076103.1\|3302183_3303623_+\|aminobutyraldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237391
NZ_CP048630.1\|WP_163076089.1\|3285137_3285566_+\|GNAT-family-acetyltransferase	unknown	unknown	gnl\|CDD\|235142
NZ_CP048630.1\|WP_163076104.1\|3304915_3307990_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP048630.1\|WP_163077697.1\|3282344_3283853_-\|L-aspartate-oxidase	unknown	unknown	gnl\|CDD\|236036
NZ_CP048630.1\|WP_163076100.1\|3298031_3299207_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270306
NZ_CP048630.1\|WP_163077704.1\|3303817_3304906_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP048630.1\|WP_163076092.1\|3288455_3289166_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP048630.1\|WP_163076099.1\|3296965_3297877_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176104
NZ_CP048630.1\|WP_163076095.1\|3290331_3291783_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236071
NZ_CP048630.1\|WP_163077702.1\|3299377_3300394_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP048630.1\|WP_163076090.1\|3285585_3286326_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235816
NZ_CP048630.1\|WP_163076101.1\|3300390_3301338_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224097
NZ_CP048630.1\|WP_163076102.1\|3301371_3302172_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224098
NZ_CP048630.1\|WP_163076091.1\|3286364_3287345_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226596

Protein	Function_ID	Function_description	E-value
NZ_CP048630.1\|WP_163076088.1\|3283893_3284961_-\|quinolinate-synthase-NadA	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	1.95481e-168
NZ_CP048630.1\|WP_163076093.1\|3289162_3289774_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	2.99726e-13
NZ_CP048630.1\|WP_163076098.1\|3295502_3296747_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	1.97772e-72
NZ_CP048630.1\|WP_163076094.1\|3289770_3290328_+\|biotin-transporter-BioY	gnl\|CDD\|224187	COG1268, BioY, Uncharacterized conserved protein [General function prediction only].	3.35943e-30
NZ_CP048630.1\|WP_163077698.1\|3287515_3288352_+\|aldo/keto-reductase	gnl\|CDD\|381364	cd19138, AKR_YeaE, Escherichia coli YeaE and similar proteins. Escherichia coli YeaE is the prototype of this family. It acts as an aldo-keto reductase (AKR) that catalyzes the reversible reduction of ketones to the respective alcohols using NAD(P)H as a hydride donor.	4.17678e-158
NZ_CP048630.1\|WP_163076097.1\|3294774_3295503_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.88898e-41
NZ_CP048630.1\|WP_163076103.1\|3302183_3303623_+\|aminobutyraldehyde-dehydrogenase	gnl\|CDD\|237391	PRK13473, PRK13473, aminobutyraldehyde dehydrogenase.	0
NZ_CP048630.1\|WP_163076089.1\|3285137_3285566_+\|GNAT-family-acetyltransferase	gnl\|CDD\|235142	PRK03624, PRK03624, putative acetyltransferase; Provisional.	5.01133e-58
NZ_CP048630.1\|WP_163076104.1\|3304915_3307990_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP048630.1\|WP_163077697.1\|3282344_3283853_-\|L-aspartate-oxidase	gnl\|CDD\|236036	PRK07512, PRK07512, L-aspartate oxidase; Provisional.	0
NZ_CP048630.1\|WP_163076100.1\|3298031_3299207_+\|extracellular-solute-binding-protein	gnl\|CDD\|270306	cd13588, PBP2_polyamine_1, The periplasmic-binding component of an uncharacterized ABC transporter involved in uptake of polyamines; contains the type 2 periplasmic binding fold. This group represents the periplasmic binding domain that functions as the primary high-affinity receptor of an uncharactertized ABC-type polyamine transport system. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.34642e-130
NZ_CP048630.1\|WP_163077704.1\|3303817_3304906_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	3.8182e-75
NZ_CP048630.1\|WP_163076092.1\|3288455_3289166_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	9.52e-67
NZ_CP048630.1\|WP_163076099.1\|3296965_3297877_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176104	cd08412, PBP2_PAO1_like, The C-terminal substrate-binding domain of putative LysR-type transcriptional regulator PAO1-like, a member of the type 2 periplasmic binding fold protein superfamily. This family includes the C-terminal substrate domain of a putative LysR-type transcriptional regulator from the plant pathogen Pseudomonas aeruginosa PAO1and its closely related homologs. The LysR-type transcriptional regulators (LTTRs) are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of N2 fixing bacteria, and synthesis of virulence factors, to a name a few. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.19287e-60
NZ_CP048630.1\|WP_163076095.1\|3290331_3291783_+\|AMP-binding-protein	gnl\|CDD\|236071	PRK07638, PRK07638, acyl-CoA synthetase; Validated.	9.38044e-108
NZ_CP048630.1\|WP_163077702.1\|3299377_3300394_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.95511e-150
NZ_CP048630.1\|WP_163076090.1\|3285585_3286326_-\|SDR-family-oxidoreductase	gnl\|CDD\|235816	PRK06500, PRK06500, SDR family oxidoreductase.	2.91225e-71
NZ_CP048630.1\|WP_163076101.1\|3300390_3301338_+\|ABC-transporter-permease-subunit	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	3.04353e-60
NZ_CP048630.1\|WP_163076102.1\|3301371_3302172_+\|ABC-transporter-permease-subunit	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.18318e-72
NZ_CP048630.1\|WP_163076091.1\|3286364_3287345_-\|hypothetical-protein	gnl\|CDD\|226596	COG4111, COG4111, Uncharacterized conserved protein [General function prediction only].	1.5489e-133

>NZ_CP048630.1|WP_163076095.1|3290331_3291783_+|AMP-binding-protein
MSGETIGARLPALALADPARPALVCDGEVLDRAGLCARVAGLAGWLQARTAPGASIALALANSPALVELFMACAVSGREALVYDPAWPPATRAALAAAVAPDLTLAQQPAVSGSGINPSPSWPAPPSPDAPFYVGFTSGTTGLPKGYRRGHRSWIDSFHVSAAAFGLGSQDVILAPGGLAASLHLYGVVHALHVGACAVMMRHFNPEHVFALIVRHGVTALYATPTQLQMLIRMGEGARFPTVRALMISGAKWQPGTRAATHALFPNARIFEFYGASETSFITIGHPADAVPEGSVGRPAPGVTLAIRDGEGNDVPAGETGTIWVASSMLFDGYACGGSGEMRRDGGFMSVGDRGWRDAAGFLFLAGREKRMLVTSGQNVYPEEIEAALAGLPGIEEAAVFGVNDALRGVRLVAVLRGAPVAGEGRVDEAGLRAALRPLLAAYKIPRRFLCLDDWPRTSGGKVDLPALQRRAETQLAQERGAA
>NZ_CP048630.1|WP_163076094.1|3289770_3290328_+|biotin-transporter-BioY
MKERSLVQIALYAAIFAVLGLLPKFDIPLAGGVPITAQSMGAMLAGVMLGAWRGALTMVLVLFVVALGAPLLAGGRGGLGVFFTPSVGFIFGWVAVAFVSGWLMQVMRAQAVFASALIASVIGGIVVMYACGIVGLALKANLSLLDATKAVLIFIPGDVIKAVLVAFIAQTVARGMPDALLSRHA
>NZ_CP048630.1|WP_163076093.1|3289162_3289774_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MISLYLAERTWLHGIPAGWKLLALALVSLVVAPIDAVAAMAGLLVATLLLYVSLGRPALRQIALLRPMWPLLVLLLAFHGWNGDIWLGVATALRLIAMVLLANAVTMTTRMDAMMDAIEPLLRPLSLIGVSPRAVALAVAMMIRFVPLLFALWEALNESWRARTGRRGGWRLLASFCIQTLRLSHHVAEALAARGGVIRGDRR
>NZ_CP048630.1|WP_163076092.1|3288455_3289166_+|ATP-binding-cassette-domain-containing-protein
MSDASILLDKVTLRRDGRVVLDALSLELAERRIGLIGCNGSGKSSLVRLFNGLLSADEGRVVVHGLDAAGNAAVLPRKVGFIFQNPDHQIIFPTVAEEVAFSLEQAGQSRREALKASLPALARFGRAHWAERPVHTLSEGEKQFLCIIAVLVMEPAVLILDEPFSSLDLPTRRRLERLIATLDQQVVMIAHELDALTTYDRVVWLHEGRVRMDGAPDAVLGAYRAFAEALGAEGPA
>NZ_CP048630.1|WP_163077698.1|3287515_3288352_+|aldo/keto-reductase
MSGKVVLPGGEKVPALGIGTWMMGERSSARKDEIESVRLGVELGMTLVDTAEMYGDGACESFLGEALAGLRDKVFLVSKVYPQNASRAGVVAACERSLKRLKTEQIDLYLLHWRGGVPLAETIIGFEHLKTAGKIRHWGVSNFDTDDMNELYQTPGGESCAVNQVLYNLTRRGPEWDLLPWLEEHEVPLMAYSPIEQGRIKTAGVLSDIAAKHNAKPFQIALAWALRSPNNIVIPKASRPVHMRENAGARDIALDADDFAALDAAFPPPGRKRSLEML
>NZ_CP048630.1|WP_163076091.1|3286364_3287345_-|hypothetical-protein
MAAPTLTSSPNPIDPAGTPEPSLAIGLAAVIVAVTGDDPKVLAIRHADGREALPSGPLERGHRTLETGLRTWVERQTLQKLGYVEQLYTFGDRDRGEDGRRALSLAYLALVREARPAGDADAAWQSWYRYFPWEDWRDGRPAVLDALEPGLRAWAAAAANPRMGEMRAERVTLCFGGTGWNEERVLERYELLYEAGLVAEALRERGSSRAAPAPSGMEMREDHRRMLALAIARLRGKIKYRPVVFELMAPSFTLLQLQRTVEALSGVRLHKGNFRRLIEQQRLVEETGETTTETGGRPARLVSFRREVLLERPAPGVRLPGGFGRR
>NZ_CP048630.1|WP_163076090.1|3285585_3286326_-|SDR-family-oxidoreductase
MTRFIGRRVLITGGTSGMGLAGARRIAAEGGAVAVTGRDVARLDATARELPEGARVIANDAADPGATRALVDAAQAMGGLDGLWLNAAYAEIGPIEEVTAQAFDAMMAANVRGPMLQLAALSPHLKAGASVVVTSSSSTYEGAAMTSLYAATKGAVIAMARSWARALAPRDIRVNVLVPGPIETNFRHFLPEEARGAFEDFVVGQVPLRRAGTPEEAAAVALFLLSEDASYVTGSQYAVDGGLIMQ
>NZ_CP048630.1|WP_163076089.1|3285137_3285566_+|GNAT-family-acetyltransferase
MTMTIEPATANDERAVVYLWRACGLVVPYNDPAADFRFALAGPNATVLVGRLECGRVTASVMVGHDGHRGWLYYVAVDPMIQRQRVGAAMVEAAEGWLRERGVVKAQLLVRETNTGVVAFYETLGFEVAPRVVMSKWIDGRE
>NZ_CP048630.1|WP_163076088.1|3283893_3284961_-|quinolinate-synthase-NadA
MLDLNVATRAENVNEFSRAYVPEGAPQVPDMPLAHLYARVSKHVTPAEWPLIARDVEAIERLKRERNAVVLGHNYQAPEIFNTVADIVGDSLALAREAVTVDADVIVMAGVHFMAETAKLLNPSKTVLMPDMKAGCSLAESITAADIRLLRQRYPGVPVVTYVNTSAEVKAESDYCCTSGNAVKVVRAVAREWGVNRILMLPDEYLAQNVQKEVPELELIAWKGHCEVHERFTPADIRDLRENHPGVVVLAHPECPPEVVAAADYAGSTAGMADYVRDEKPARVVLITECSMADNVAVGHPDIEFVRPCNLCPHMRRITLGNIRRSLETMTHQVEIDPAIADRARLAVERMLAIR
>NZ_CP048630.1|WP_163077697.1|3282344_3283853_-|L-aspartate-oxidase
MGHSPDSVIVVGGGIAGLATALRLAPLPVTLVVMAPLGAEAATGWAQGGIAAAIGAGDDAEFHARDTLAAGAGLSEADVARNVAGAAGEAIDWLVGLGTPFDRAPDGSLALGLEAAHSRRRIVHAAGDGTGRVVLETLVAAARACPSLRVIEGQRAITLLKDATGRVAGIAVQDREGRLGTLSGRAVVLATGGLGGLYGSTTNPLGATGSGLALAARAGAVLRDMEFVQFHPTAIAVGADPMPLATEALRGEGAKLFNERGERFMSEVPGQELAPRDVVARAIFREIAAGRRVVLDARMDGVEERFRGVVALCRANGLDPLRAPIPVRPAAHYHMGGIRVDGAGRASVPGLWACGEVASTGLHGANRLASNSLLEALAYAQWIAADIGGEDARPGRPDGAVMPVRPSPARAEIRALMDAKVGVVREAGLLDAAVARLGMLAASGEDDLALVAWLVADAARRREESRGGHFRADHPLPAETARHGQTTLDERFGNAAGIRQVA
>NZ_CP048630.1|WP_163076097.1|3294774_3295503_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MPRLRSSVFVLLLVLWTVIFAPLVPWFMLRKNPRTTRRVSRFWADGVVRILRLVGLAYRIIGEENRPAGPALYVANHQSAFETIAATVLVPDVAIVLKEELYRIPIFGWFLKNSPMIAIDRAGGASSMKKMFREARAASEDGRSLLIFPEGTRRPVDERGEFQRGVVLLYKALGLPVVPMVNNAGLFWPARTFAIKPGEITVSILPSLPPGLPDAEFLARITDTIYAERDRLVAEALAKEER
>NZ_CP048630.1|WP_163076098.1|3295502_3296747_+|FAD-dependent-oxidoreductase
MAEPSDAPAGAGVVIVGAGQGGFQLAASLREAGFDGPVTLLGDEPGLPYQRPPLSKAYLKGDAGIEQIELRPAAFYTQHRIILAHGRASGIDRARRRLLLEGGASLPYEHLVLATGARNRPLPVPGHELGGLHALRTRADADALKSALAGTRHVVVIGAGFIGLEFAAVARALGHGVTVLEAASRPLARAVSPDMSAFFVEAHAAMGTRLLLGTGVVGLAGAGGRVTGVEATDGVVYPADVVVAGIGVTPNVELAAEAGLEIANGIVVDDHLATADPAISAIGDAVAYPSRFAGGRVRLESVQNAVDQARCLAARLVGRSAPFEAVPWFWSDQGDLKLQIVGLAGPTDSAVLRGDPASRRFSVFRFRDGVLTAIESVNRPADHMLGRRLLAGTPRITPAQAGDEGFELKSLLTR
>NZ_CP048630.1|WP_163076099.1|3296965_3297877_+|LysR-family-transcriptional-regulator
MAFSLRQLQYFVAVAENGSVSSAAHTLSISQSTVTEALRELELDLGFKLLERHARGADLTLKGHHFLRHARKILGDVADARRALAGPETAALAGRLSVGVTPLVAGYVYSDLIARYRRAFPGIAVEAVEDAADYLEHLLVGGELDVAVMVLPQGRRSAALQTESVEVSPYRVWMPLGHRALAEERVSLLDLAGEPHVLLTIDEIAEASEVVWRRLGIRPPVAFRTRSVEAVRSLVATGAGVAVLPDLTYRPWSLEGDKIEARVLVDEVPAVEVATAWRRGSPLSAAAAGFVSVAATRHGGRSR
>NZ_CP048630.1|WP_163076100.1|3298031_3299207_+|extracellular-solute-binding-protein
MPTSRVTRYLHLPALAACVSLSIQPVVAAELKELGKGEGQVDIVAWAGYIERGDTDKAFDWVSDFEKSTGCKVNVKTAGTSDEMVALMNEGGFDLVTASGDASLRLIAGKKVAPINTKLIPSWSTVDDRLQNAPWHTVDGVHYGVPYQWGSNVLMYNTEAFKGEAPKSWSVVFEEQTLPDGKSNKGRIQAFDGPIYIADAALYLMAHKPELGIKDPYELNEEQYKAALDLLRQQRKIVQRYWHDAMIQIDDFTNEGVVASSSWPFQVNLLVGEKQPIASTIPSEGATGWADTTMMHTDAAHPNCAYMWMEHSLSPKVQGDLASWFGSVPAVPAACKGNELLGPDGCATNGMGDFEKIHFWRTPVSKCATQAEGCVPYYRWVSDYIAVLGGR
>NZ_CP048630.1|WP_163077702.1|3299377_3300394_+|ATP-binding-cassette-domain-containing-protein
MVPAVRFQGVIRHFGAIRAVDGVELSIAPGEFFAMLGPSGSGKTTCLRLIAGFDQPDAGHIEIFGEAVEGLPPYRRGVNTVFQDYALFPHLSVGDNVAYGLRVRGVGRAERDRLAREALALVKLSGMETRRPAQLSGGQRQRVALARALVVRPRVLLLDEPLGALDLKLREEMQTELKALQRELGLTFVFVTHDQGEALSMADRVAVFNQGRIVQVGPPEEVYERPATRFVAQFVGSANVLDAAQAAALGGARRVSSLRPEKIRLLSGQELPPQDARVVEARILDVSYQGAVRRISVDTSDGLRLVAAIPAGAGGASIGEGIRLTVPVSALQPMEGEE
>NZ_CP048630.1|WP_163076101.1|3300390_3301338_+|ABC-transporter-permease-subunit
MSLASFDLPAPRGGLLRSLSDTLVRHGRLLTLLLLLPPLLWLGLIYLGSLFIFLGQSIFSIDEFSGTIVREPTTATLIELFRPANFDIVLRTVGIAATVTALCAVLAFPIAYYAARYAGPSVKAGFYLAVMMPLWSSYLVKVYAWKLLLAKEGAIGWIAERLGLGGLLETWLSLPVVGGPSLSVSYTGMVLAFTYLWLPFMILPVQAALERVPPHLIEAAGDLGAAPGVVFRTVILPLALPGVVAGAIFTFSLTLGDYIVPQIIGTSALVLGQAVYTLQGTAGNIPLAAAFSLVPILVMAAFLTIAKRVGAFDAL
>NZ_CP048630.1|WP_163076102.1|3301371_3302172_+|ABC-transporter-permease-subunit
MTRASLSLKIAALAGLAFLHIPLLFILLYCFTTEERSYAFPPPGFTLKWFGVVWERADIWAAVGLSLRVAVVATLLALVLGTLAAGALARARFFGRDPISLLFVLPIALPGIVTGIALRQAFGLMEIPFSFWTIVIGHATFCIVVVYNNAVARLRRLSPSLIEASMDLGADAFQTFRLVVLPNIGTALLAGGMLAFALSFDEVIVTTFTAGQQSTLPIWMLSELIRPRQRPVTNVVAVLIIIVTFLPILAAYYLTREGEAVAGGGK
>NZ_CP048630.1|WP_163076103.1|3302183_3303623_+|aminobutyraldehyde-dehydrogenase
MNALSDTEMLIGSNFVAGTETAETVLNPKTEETLIELPEASPDQIDAAVTAAEKAFTTWSRTTPAERSYMLLKLADRIEAEAESFATLEALNCGKPRHAVLNDEIPGIVDCFRFFAGAARTQHGMVAGEYMAGHTSMIRRDPIGVVASIAPWNYPLMMAAWKLAPALAGGNTVVIKPSEQTPLTMLKLAKLIADIFPEGVVNVVVGRGESVGNALINHPKVAMISLTGDIATGKKVLGAAARSVKRTHLELGGKAPVIVFDDADIEAVVEGVKIFGYYNAGQDCTAACRIYAGSKVYEKLVADLVSAVSGLKFGQADDSENDIGPLISSRQRARVASFVERASELDHIEIATGGKLASGKGFFYEPTVVAGALQSDEIVRREVFGPVVSVTRFSDVDEAVGWANDSDYGLASSVWTKDIGRGMATASRLQYGCTWVNCHFMLVSEMPHGGLKQSGYGKDLSAYALEDYTVVRHVMVKNA
>NZ_CP048630.1|WP_163077704.1|3303817_3304906_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MVLCLAVLGGAGYLAQQKGWLEAGLAAVKDEARAAPEPRASGAQRVPVEVSPARASQVTTDIRAIGSLQSDESVKVASDVSGRIEEIAFREGEHVKQGDVLVVLDAALVKASLEETEARLELAKANYDRAQRLQKSGSGTERALDEARAELNTANALLDSQRVQIAKHTITAPFDGVVGLRSVSVGAYIPVGTELVNLEKIDLLKVDFKVPEIYLRSVAVGQEVQISVDAIPNETFTGEVYAIDPLIDVNGRALSVRARLPNSDLMLRPGLFVRVLLKGQDARTAIFVPESAIVPRGQERLVWVVEDGKAIEKKVTLGQRLAGEVEITDGIVADASVVTAGQARLRPNVPVEVVGRPPDPQS
>NZ_CP048630.1|WP_163076104.1|3304915_3307990_+|efflux-RND-transporter-permease-subunit
MGLAEICIRRPVFATVLSLLMVLVGIVAYSRLTVREYPNIDEPVVSVVTKYSGASASIVESQVTQVLEGSIAGIEGIDVLESTSRSESSRITVRFRSEINPDVAASDVRDRVSRVRQRLPDEIDEPVISKVEADAQPVMFIVFSSDRMNALELTDYIDRYVIDRFKNLTGIADVQIYGERRYAMRVWIDRERLAAYNLTVQDIEDSLRAQNVEIPSGRIESADREFTVLSRTALATVDQFNDIVVKRADGAQVKLSEVAKVELGAADQRRSSRFNGGEAVIVGIIKQAVANPLDVSAGVRDVLPAVNASLPEGMTATIGNDNAVFIDRSIRSVFHTILEAVILVVLVIVVFLRSLRASIIPIVTIPISLITTFAIMYALGFSVNTLTLLALVLAIGLVVDDAIVVLENIFRHIEHGMKPIPAAIKGAREIGFAVVAMTLTLAAVYAPVAFASGRTGRLFLEFALTLAGAVLISGFVALSLTPMMCSRLLKHDAHPGRVSAFIERCLCGVENGYRRLLGVSLKVRPLMLLVAFLVAGVSGILIYALPSELSPVEDRGVVRVNGSGPEGSTLAFTTRYTNQVEGILDKIPEMDSVLIINGLPEVHRFLIIGRLKDWDERDRRQQEIVAETAPKLRRIAGVSAYANNPASLGASNNSRPIEFVLQTSGTYDELNEYVDRFLERIEGYPGLTSIQSDLKLNKPEISITIDRAKAADLGIDVAVLGRTLESLLGGRQVTRFEVGGEQYDVYVQLDARDRASPATLDTIYLRSASGDMVQLSNLVSVRETVAPQELKRFNQLRSATISANLAPGFSQGEALAYLGRTASEVLPRTVQTDVSGQSREFRASGQSLLLVFLLALGFIYLVLSAQFESFRDPVIIMLTVPLSMTGALAALYFTGGTLNVYSQIGLVTLVGLITKHGILIVEFANQQQEAGLDRVAAVIEAATLRLRPILMTTGAMVLGALPLALATGAGGESRAQIGWVIVGGMSLGTLLTLFVVPAVYSLIGRIHHTAHAEIAPGIVHSPAE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

444982 : 489889

Rhodobacter_phage(14.29%)

capsid,head,terminase,portal,tail,integrase,protease

attL 451261:451276|attR 474333:474348

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163073673.1\|444982_446893_-\|tail	phage tail length tape measure family protein	A0A2D2W291	Sinorhizobium_phage	1.3e-30	25.8
WP_163073675.1\|446893_447235_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_163073677.1\|447416_447848_-\|tail	phage tail protein	I3UM07	Rhodobacter_phage	1.2e-13	30.3
WP_163073679.1\|447850_448261_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_163073681.1\|448263_448839_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_163073683.1\|448922_449258_-\|head	phage head closure protein	NA	NA	NA	NA
WP_163073685.1\|449254_449824_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_163073687.1\|449825_450224_-	hypothetical protein	NA	NA	NA	NA
WP_163073689.1\|450296_451592_-\|capsid	phage major capsid protein	A0A2H4JD98	uncultured_Caudovirales_phage	6.5e-135	63.3
451261:451276	attL	NA	NA	NA	NA
WP_163077210.1\|451619_452306_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.1e-56	53.8
WP_163077212.1\|452338_453589_-\|portal	phage portal protein	A0A0U2BXP2	Paracoccus_phage	6.1e-114	56.6
WP_163073691.1\|453591_455313_-\|terminase	terminase large subunit	I3ULZ6	Rhodobacter_phage	6.9e-124	43.3
WP_163073693.1\|455312_455807_-	hypothetical protein	NA	NA	NA	NA
WP_163073695.1\|455895_456255_-	HNH endonuclease	I3ULZ4	Rhodobacter_phage	3.3e-28	55.9
WP_163073697.1\|456359_456920_-	hypothetical protein	NA	NA	NA	NA
WP_163073699.1\|457035_458121_-	helix-turn-helix domain-containing protein	A0A0P0ZC04	Stx2-converting_phage	4.3e-07	37.5
WP_163073701.1\|458117_458282_-	hypothetical protein	NA	NA	NA	NA
WP_163073703.1\|459178_459496_-	hypothetical protein	NA	NA	NA	NA
WP_163073705.1\|459492_460539_-	site-specific DNA-methyltransferase	A0A0F7L417	uncultured_marine_virus	1.0e-93	52.0
WP_163073707.1\|460592_460748_+	hypothetical protein	NA	NA	NA	NA
WP_163073709.1\|460744_460945_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_163073711.1\|460945_462340_-	helicase	F8TUJ9	EBPR_podovirus	2.4e-119	49.2
WP_163073713.1\|462336_462684_-	HNH endonuclease	A0A191VYJ6	Roseobacter_phage	2.4e-15	45.5
WP_163073715.1\|462680_464111_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
WP_163077214.1\|464094_464478_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_163073717.1\|464654_465149_-	hypothetical protein	NA	NA	NA	NA
WP_163073718.1\|465145_465409_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_163073720.1\|465418_465832_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_163073722.1\|465963_466470_-	hypothetical protein	NA	NA	NA	NA
WP_163073723.1\|466738_466987_+	hypothetical protein	NA	NA	NA	NA
WP_163077216.1\|467094_467634_+	hypothetical protein	A0A067XQV3	Caulobacter_phage	6.2e-23	38.1
WP_163073725.1\|467643_467787_+	hypothetical protein	NA	NA	NA	NA
WP_163073727.1\|467890_468145_+	hypothetical protein	NA	NA	NA	NA
WP_163073729.1\|468062_468521_+	DUF2312 domain-containing protein	Q8W6H2	Sinorhizobium_phage	3.5e-19	49.6
WP_163077217.1\|468595_468994_+	hypothetical protein	NA	NA	NA	NA
WP_163073731.1\|468998_470216_+	DNA polymerase III subunit beta	NA	NA	NA	NA
WP_163073733.1\|470212_470578_+	hypothetical protein	NA	NA	NA	NA
WP_163073735.1\|470571_470817_+	hypothetical protein	F8TUU1	EBPR_podovirus	2.0e-13	54.2
WP_163073737.1\|470813_471020_+	hypothetical protein	NA	NA	NA	NA
WP_163073739.1\|471260_471485_+	hypothetical protein	NA	NA	NA	NA
WP_163073741.1\|471745_472933_+\|integrase	tyrosine-type recombinase/integrase	B4UTU2	Rhizobium_phage	6.5e-73	43.0
WP_163073743.1\|474412_474610_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
474333:474348	attR	NA	NA	NA	NA
WP_163073745.1\|474613_475105_-	hypothetical protein	NA	NA	NA	NA
WP_163073746.1\|475181_475475_-	hypothetical protein	NA	NA	NA	NA
WP_163073748.1\|475770_476322_-	hypothetical protein	NA	NA	NA	NA
WP_163073750.1\|476362_476521_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_163073752.1\|476605_476917_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_163073754.1\|477077_477335_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_163073756.1\|477331_477658_+	hypothetical protein	NA	NA	NA	NA
WP_163073759.1\|478057_478717_+	3'-5' exoribonuclease	NA	NA	NA	NA
WP_163073761.1\|478713_479709_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_163073763.1\|479869_481024_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_163073765.1\|481080_481761_-	hypothetical protein	NA	NA	NA	NA
WP_163073767.1\|481856_483458_-\|terminase	terminase large subunit	B4UTP0	Rhizobium_phage	7.4e-64	33.3
WP_163073768.1\|483460_483877_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_163073770.1\|483873_484194_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_163073772.1\|484196_485315_-\|head,tail	phage head-tail connector protein	Q38456	Bacillus_phage	1.6e-17	51.0
WP_163073773.1\|485521_485953_-	hypothetical protein	NA	NA	NA	NA
WP_163073774.1\|485994_487203_-\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	7.1e-43	32.4
WP_163073775.1\|487206_487710_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.8e-24	47.3
WP_163073776.1\|487709_488891_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	2.1e-39	32.2
WP_163073777.1\|489112_489889_-	hypothetical protein	A0A240F4T8	Ochrobactrum_phage	2.8e-08	36.4

DBSCAN-SWA_2

3053584 : 3090423

Rhodobacter_phage(26.92%)

transposase,plate,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163075884.1\|3053584_3054685_-\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	8.8e-32	32.8
WP_163075885.1\|3054686_3055157_-	phage GP46 family protein	NA	NA	NA	NA
WP_163075886.1\|3055209_3055776_-\|plate	phage baseplate assembly protein	NA	NA	NA	NA
WP_163075887.1\|3055783_3056917_-	Mu P family protein	C9DGQ3	Escherichia_phage	9.7e-26	28.9
WP_163075888.1\|3057006_3058287_-	DNA circularization N-terminal domain-containing protein	NA	NA	NA	NA
WP_163075889.1\|3058286_3060599_-\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_163075890.1\|3060610_3060751_-	hypothetical protein	NA	NA	NA	NA
WP_163075891.1\|3060747_3061227_-	hypothetical protein	NA	NA	NA	NA
WP_163075892.1\|3061223_3061583_-\|tail	phage tail tube protein	NA	NA	NA	NA
WP_163075893.1\|3061621_3063091_-\|tail	phage tail protein	A0A2P9JZJ8	Alteromonadaceae_phage	1.2e-52	33.9
WP_163075894.1\|3063099_3063297_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_163075895.1\|3063293_3063911_-	hypothetical protein	NA	NA	NA	NA
WP_163075896.1\|3063912_3064335_-	DUF1320 family protein	A0A0C4UR02	Shigella_phage	2.0e-08	37.0
WP_163075897.1\|3064376_3065075_-	hypothetical protein	NA	NA	NA	NA
WP_163075898.1\|3065089_3065983_-\|head	Mu-like prophage major head subunit gpT family protein	M4SRT6	Rhodobacter_phage	1.4e-107	62.3
WP_163075899.1\|3065992_3066403_-	hypothetical protein	J9RWG0	Pseudomonas_phage	1.1e-30	56.4
WP_163075900.1\|3066404_3067424_-	hypothetical protein	M4SNT6	Rhodobacter_phage	4.6e-51	41.6
WP_163075901.1\|3067631_3068153_-	phage virion morphogenesis protein	A0A2H4J9E5	uncultured_Caudovirales_phage	6.0e-15	32.1
WP_163075902.1\|3068250_3069582_-	hypothetical protein	Q5ZQY3	Pseudomonas_phage	1.4e-44	42.0
WP_163075903.1\|3069654_3071313_-	DUF935 family protein	M4SPR8	Rhodobacter_phage	8.1e-114	42.9
WP_163075904.1\|3071312_3072992_-	hypothetical protein	A0A219VH72	Ochrobactrum_phage	9.2e-190	62.1
WP_163075905.1\|3072975_3073575_-	DUF3486 family protein	M4SNU5	Rhodobacter_phage	1.2e-19	32.1
WP_163075906.1\|3073576_3073876_-	hypothetical protein	M4SPS4	Rhodobacter_phage	1.5e-26	62.5
WP_163075907.1\|3073872_3074253_-	DUF2730 family protein	A0A219VHD8	Ochrobactrum_phage	5.2e-08	50.0
WP_163077671.1\|3074253_3074472_-	TraR/DksA C4-type zinc finger protein	A0A2I7S9C4	Vibrio_phage	1.4e-05	42.9
WP_163075908.1\|3074595_3074853_-	hypothetical protein	NA	NA	NA	NA
WP_163075909.1\|3074849_3075962_-	peptidoglycan-binding protein	C9DFY3	Deftia_phage	3.4e-15	32.5
WP_163075910.1\|3075965_3076115_-	hypothetical protein	NA	NA	NA	NA
WP_163075911.1\|3076185_3076557_-	hypothetical protein	NA	NA	NA	NA
WP_163075912.1\|3076553_3076787_-	hypothetical protein	NA	NA	NA	NA
WP_163075913.1\|3076783_3077434_-	DUF1018 domain-containing protein	M4STB3	Rhodobacter_phage	1.2e-23	34.7
WP_163075914.1\|3077430_3077574_-	hypothetical protein	NA	NA	NA	NA
WP_163075915.1\|3077570_3077786_-	hypothetical protein	NA	NA	NA	NA
WP_163075916.1\|3077785_3077953_-	hypothetical protein	NA	NA	NA	NA
WP_163075917.1\|3077949_3078222_-	hypothetical protein	NA	NA	NA	NA
WP_163075918.1\|3078223_3079063_-	ParB N-terminal domain-containing protein	A0A0U2C144	Paracoccus_phage	7.9e-33	36.8
WP_163075919.1\|3079059_3079362_-	hypothetical protein	NA	NA	NA	NA
WP_163075920.1\|3079358_3079619_-	hypothetical protein	NA	NA	NA	NA
WP_163075921.1\|3079615_3079798_-	hypothetical protein	NA	NA	NA	NA
WP_163073205.1\|3079794_3080469_-	hypothetical protein	A0A0U5KSG7	unidentified_phage	7.1e-08	46.9
WP_163075922.1\|3080479_3081151_-	DUF3164 family protein	M4STB6	Rhodobacter_phage	1.3e-65	58.6
WP_163075923.1\|3081134_3081476_-	hypothetical protein	NA	NA	NA	NA
WP_163075924.1\|3081468_3082053_-	hypothetical protein	NA	NA	NA	NA
WP_163075925.1\|3082049_3082406_-	hypothetical protein	NA	NA	NA	NA
WP_163075926.1\|3082416_3083385_-	AAA family ATPase	A0A2P9JZG8	Alteromonadaceae_phage	5.9e-48	38.2
WP_163075927.1\|3083435_3085403_-\|transposase	Mu transposase C-terminal domain-containing protein	A0A1B1P6Z4	Rhodovulum_phage	2.3e-131	41.7
WP_163075928.1\|3085399_3085861_-	DNA transposition protein	NA	NA	NA	NA
WP_163075929.1\|3085868_3086009_-	hypothetical protein	NA	NA	NA	NA
WP_163075930.1\|3086035_3086821_-	ParB N-terminal domain-containing protein	R9U496	Rhizobium_phage	2.2e-29	35.2
WP_163077673.1\|3086844_3087084_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_163075931.1\|3087319_3088066_+	helix-turn-helix domain-containing protein	H1ZZB6	Pseudomonas_virus	1.4e-12	29.8
WP_163075932.1\|3088081_3088522_+	hypothetical protein	NA	NA	NA	NA
WP_163075933.1\|3088533_3088881_+	hypothetical protein	A0A0S2MVJ2	Bacillus_phage	8.4e-05	31.4
WP_163075934.1\|3089262_3090423_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	3.0e-62	40.9

DBSCAN-SWA_3

3460665 : 3476061

Paracoccus_phage(16.67%)

capsid,head,portal,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163077740.1\|3460665_3461976_+	DNA-packaging protein	A0A0U4IJ26	Arthrobacter_phage	4.8e-77	41.9
WP_163076234.1\|3462037_3463195_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	7.0e-72	40.3
WP_163076235.1\|3463245_3463434_+	hypothetical protein	NA	NA	NA	NA
WP_170308643.1\|3463430_3463601_+	hypothetical protein	NA	NA	NA	NA
WP_163076236.1\|3463597_3464170_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.0e-31	46.8
WP_163076237.1\|3464242_3465511_+\|capsid	phage major capsid protein	Q3HQT0	Burkholderia_phage	2.2e-79	41.2
WP_163076238.1\|3465539_3466319_-\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_163077742.1\|3466418_3466985_+\|head,tail	phage head-tail connector protein	A0A0F7L420	uncultured_marine_virus	2.9e-07	26.5
WP_163076239.1\|3466981_3467302_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_163076240.1\|3467372_3467723_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_163076241.1\|3467810_3468218_+\|tail	phage major tail protein, TP901-1 family	A0A0H4ABD9	Pseudoalteromonas_phage	2.3e-06	30.5
WP_163076242.1\|3468229_3468583_+	gene transfer agent family protein	NA	NA	NA	NA
WP_163076243.1\|3468633_3468858_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_163077744.1\|3468841_3469453_+\|tail	phage tail tape measure protein	G9JXH3	Shigella_phage	3.3e-12	41.4
WP_163076244.1\|3469452_3470094_+	TIGR02217 family protein	A0A0B5A2K3	Paracoccus_phage	1.7e-51	52.8
WP_163076245.1\|3470090_3470954_+	DUF2163 domain-containing protein	A0A0K0PVK1	Roseobacter_phage	2.1e-60	45.6
WP_163076246.1\|3470956_3471394_+	C40 family peptidase	F4YXU4	Roseobacter_phage	5.6e-30	47.4
WP_163076247.1\|3471433_3475333_+	glycoside hydrolase TIM-barrel-like domain-containing protein	A0A0K1LLC1	Rhodobacter_phage	4.7e-237	41.0
WP_163076248.1\|3475371_3476061_+	DUF2793 domain-containing protein	A0A0K1Y6G9	Rhodobacter_phage	5.7e-21	43.9

DBSCAN-SWA_4

4163962 : 4175557

uncultured_Mediterranean_phage(81.82%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163076766.1\|4163962_4164991_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	1.1e-20	43.8
WP_163076767.1\|4165010_4165823_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.5e-31	35.3
WP_163076768.1\|4165819_4166539_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.6e-40	50.6
WP_163076769.1\|4166579_4167659_+	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	3.1e-13	39.0
WP_163076770.1\|4167728_4167956_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	3.1e-08	65.9
WP_163076771.1\|4168019_4168784_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_163076772.1\|4168780_4169581_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.0e-50	46.2
WP_163076773.1\|4169732_4171214_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-92	41.8
WP_163076774.1\|4171274_4172045_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.2e-36	39.8
WP_163076775.1\|4172091_4172745_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.3e-27	45.2
WP_163076776.1\|4172853_4174035_+	peptidoglycan DD-metalloendopeptidase family protein	Q8SBN9	Clostridium_phage	2.0e-18	38.5
WP_163076777.1\|4174109_4175021_-	DUF815 domain-containing protein	NA	NA	NA	NA
WP_163076778.1\|4175218_4175557_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	3.7e-13	41.2

DBSCAN-SWA_5

4286750 : 4294580

Hokovirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163077889.1\|4286750_4288409_-\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	1.7e-95	39.8
WP_163076871.1\|4288344_4289376_-	DNA polymerase III subunit delta'	S5WKH4	Pseudomonas_phage	4.5e-14	29.1
WP_163077892.1\|4289372_4290029_-	dTMP kinase	M1PSC7	Streptococcus_phage	1.2e-31	39.7
WP_163077895.1\|4290088_4291234_-	serine hydrolase	B6DZZ7	Stx2-converting_phage	7.4e-58	38.0
WP_163076872.1\|4291390_4292392_-	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	4.6e-19	56.0
WP_163076873.1\|4292642_4293911_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_163076874.1\|4293914_4294580_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.2e-23	36.8

DBSCAN-SWA_6

4441721 : 4454796

uncultured_Mediterranean_phage(75.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163076994.1\|4441721_4442858_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	6.8e-96	52.8
WP_163076995.1\|4442854_4443940_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_163076996.1\|4444062_4444524_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.8e-31	51.2
WP_163076997.1\|4444569_4445121_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	4.9e-39	54.4
WP_163076998.1\|4445162_4445672_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.5e-21	32.1
WP_163076999.1\|4445772_4446354_-	TIGR00730 family Rossman fold protein	A0A2I2L3F0	Orpheovirus	7.0e-12	28.4
WP_163077000.1\|4446407_4449173_-	DNA gyrase subunit A	A0A1B1IVS2	uncultured_Mediterranean_phage	1.6e-77	41.5
WP_163077001.1\|4449537_4450164_+	NAAT family transporter	NA	NA	NA	NA
WP_163077002.1\|4450218_4450617_-	DUF2306 domain-containing protein	NA	NA	NA	NA
WP_163077945.1\|4450705_4451248_-	single-stranded DNA-binding protein	A0A0U2C0X4	Paracoccus_phage	5.8e-45	72.0
WP_170308654.1\|4451536_4451704_+	hypothetical protein	NA	NA	NA	NA
WP_163077003.1\|4451889_4454796_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	63.3

DBSCAN-SWA_7

4471055 : 4478752

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163077020.1\|4471055_4471547_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	8.5e-11	32.2
WP_163077021.1\|4471590_4472181_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.1e-20	32.8
WP_163077954.1\|4472182_4473265_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2I2L4R9	Orpheovirus	9.0e-29	33.8
WP_163077022.1\|4473321_4473852_-	transcriptional repressor NrdR	NA	NA	NA	NA
WP_163077023.1\|4473861_4475169_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.9e-95	50.5
WP_163077024.1\|4475453_4476350_-	glyoxalase	NA	NA	NA	NA
WP_163077025.1\|4476573_4477602_+	histone deacetylase family protein	A0A2K9L4C2	Tupanvirus	8.2e-40	43.3
WP_163077026.1\|4477606_4478752_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	8.3e-17	35.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048630

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection