CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048629	Pseudomonas sp. OIL-1 chromosome, complete genome	4 crisprs	csa3,cas3,DEDDh,DinG	0	0	2	0

1. NZ_CP048629

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048629_1

• CRISPR_ID: NZ_CP048629_1
• CRISPR_location: 897801-897889
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048629_1

Consensus_repeat	Method
GGCAACTTTGCAAACGATCGAGA	CRISPRCasFinder

spacers of NZ_CP048629_1

>1.1|897824|43|NZ_CP048629|CRISPRCasFinder
GAAAGCGTCGGAAGCAGGGAAAAAAGGCGGCCACAACAGCGGT

CRISPR arrays and Neighbor proteins around NZ_CP048629_1

CRISPR arrays

The CRISPR arrays of NZ_CP048629_1

>merge|NZ_CP048629|1|897801-897889|CRISPRCasFinder
GGCAACTTTGCAAACGATCGAGAGAAAGCGTCGGAAGCAGGGAAAAAAGGCGGCCACAACAGCGGTGGCAACTTTGCAAACGATCGCGA

>NZ_CP048629|1|1|897801-897889|CRISPRCasFinder
GGCAACTTTGCAAACGATCGAGA	GAAAGCGTCGGAAGCAGGGAAAAAAGGCGGCCACAACAGCGGT
GGCAACTTTGCAAACGATCGCGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048629.1|WP_150299868.1|905514_905934_+|RNA-polymerase-binding-protein-DksA	unknown	unknown	gnl|CDD|274124
NZ_CP048629.1|WP_163981937.1|899915_901673_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|223910
NZ_CP048629.1|WP_163981934.1|896881_897445_-|GGDEF-domain-containing-protein	unknown	unknown	gnl|CDD|143635
NZ_CP048629.1|WP_163984170.1|890357_892100_+|bifunctional-protein-serine/threonine-kinase/phosphatase	unknown	unknown	gnl|CDD|270916
NZ_CP048629.1|WP_150299862.1|898280_898526_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_163984171.1|892751_893291_-|sugar-O-acetyltransferase	unknown	unknown	gnl|CDD|100047
NZ_CP048629.1|WP_163981938.1|901824_903021_+|chromate-efflux-transporter	unknown	unknown	gnl|CDD|273350
NZ_CP048629.1|WP_163981939.1|905066_905438_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_163981941.1|907427_908786_-|GntP-family-permease	unknown	unknown	gnl|CDD|225330
NZ_CP048629.1|WP_163981936.1|898602_899652_+|glycosyltransferase	unknown	unknown	gnl|CDD|133028
NZ_CP048629.1|WP_163981931.1|893313_894150_-|penicillin-insensitive-murein-endopeptidase	unknown	unknown	gnl|CDD|236511
NZ_CP048629.1|WP_150299858.1|895511_896063_-|Clp-protease	unknown	unknown	gnl|CDD|223811
NZ_CP048629.1|WP_163981940.1|906288_907428_-|glycerate-kinase	unknown	unknown	gnl|CDD|376844
NZ_CP048629.1|WP_163981932.1|894164_895322_-|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|366030
NZ_CP048629.1|WP_163981935.1|897464_897626_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_150299869.1|906059_906257_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_163981933.1|896095_896275_-|DUF2795-domain-containing-protein	unknown	unknown	gnl|CDD|378655
NZ_CP048629.1|WP_150299859.1|896336_896678_-|glucose-starvation-inducible-protein-B	unknown	unknown	gnl|CDD|226252
NZ_CP048629.1|WP_150299866.1|903171_904761_+|ABC-F-family-ATPase	unknown	unknown	gnl|CDD|237894
NZ_CP048629.1|WP_163981930.1|892209_892746_+|DUF1523-family-protein	unknown	unknown	gnl|CDD|369397

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048629.1|WP_150299868.1|905514_905934_+|RNA-polymerase-binding-protein-DksA	gnl|CDD|274124	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA. The model that is the basis for this family describes a small, pleiotropic protein, DksA (DnaK suppressor A), originally named as a multicopy suppressor of temperature sensitivity of dnaKJ mutants. DksA mutants are defective in quorum sensing, virulence, etc. DksA is now understood to bind RNA polymerase directly and modulate its response to small molecules to control the level of transcription of rRNA. Nearly all members of this family are in the Proteobacteria. Whether the closest homologs outside the Proteobacteria function equivalently is unknown. The low value set for the noise cutoff allows identification of possible DksA proteins from outside the proteobacteria. TIGR02419 describes a closely related family of short sequences usually found in prophage regions of proteobacterial genomes or in known phage. [Transcription, Transcription factors, Regulatory functions, Small molecule interactions].	4.39894e-39
NZ_CP048629.1|WP_163981934.1|896881_897445_-|GGDEF-domain-containing-protein	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.41928e-62
NZ_CP048629.1|WP_163984170.1|890357_892100_+|bifunctional-protein-serine/threonine-kinase/phosphatase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.95722e-62
NZ_CP048629.1|WP_163984171.1|892751_893291_-|sugar-O-acetyltransferase	gnl|CDD|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	8.38428e-101
NZ_CP048629.1|WP_163981938.1|901824_903021_+|chromate-efflux-transporter	gnl|CDD|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	2.91023e-91
NZ_CP048629.1|WP_163981941.1|907427_908786_-|GntP-family-permease	gnl|CDD|225330	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism].	2.41498e-105
NZ_CP048629.1|WP_163981936.1|898602_899652_+|glycosyltransferase	gnl|CDD|133028	cd04185, GT_2_like_b, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.93709e-75
NZ_CP048629.1|WP_163981931.1|893313_894150_-|penicillin-insensitive-murein-endopeptidase	gnl|CDD|236511	PRK09429, mepA, penicillin-insensitive murein endopeptidase; Reviewed.	2.90856e-110
NZ_CP048629.1|WP_150299858.1|895511_896063_-|Clp-protease	gnl|CDD|223811	COG0740, ClpP, Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	5.97917e-32
NZ_CP048629.1|WP_163981932.1|894164_895322_-|alpha/beta-fold-hydrolase	gnl|CDD|366030	pfam00326, Peptidase_S9, Prolyl oligopeptidase family.	6.67964e-12
NZ_CP048629.1|WP_163981930.1|892209_892746_+|DUF1523-family-protein	gnl|CDD|369397	pfam07509, DUF1523, Protein of unknown function (DUF1523).	3.55905e-68
NZ_CP048629.1|WP_163981940.1|906288_907428_-|glycerate-kinase	gnl|CDD|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP048629.1|WP_163981933.1|896095_896275_-|DUF2795-domain-containing-protein	gnl|CDD|378655	pfam11387, DUF2795, Protein of unknown function (DUF2795). This family of proteins has no known function.	2.15971e-10
NZ_CP048629.1|WP_150299859.1|896336_896678_-|glucose-starvation-inducible-protein-B	gnl|CDD|226252	COG3729, GsiB, General stress protein [General function prediction only].	3.08034e-06
NZ_CP048629.1|WP_150299866.1|903171_904761_+|ABC-F-family-ATPase	gnl|CDD|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP048629.1|WP_163981937.1|899915_901673_+|HAMP-domain-containing-protein	gnl|CDD|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	4.42657e-56

Protein sequences

>NZ_CP048629.1|WP_163981935.1|897464_897626_-|hypothetical-protein
MGVDTSSGMIERLVRSIRDERSMRLQREVEEKRFRHRTETSERRVFSLGQHFT
>NZ_CP048629.1|WP_163981934.1|896881_897445_-|GGDEF-domain-containing-protein
MPGVANDVTERQLAAHAAEHMAVTDLLTGVGNRRGLMKRLDQSMRIVESDPGYSCGLVMLDLDRFKQANDTYGHAVGDKVLQHVASLLTELGRQSDYVARLGGDEFVVLLEGTARREGIERVLDRFLQRVNEPIRIESGVEVSIGASLGVAILNRHAQSAEDLLQRADSAMYQAKHSGRNCYRFHNG
>NZ_CP048629.1|WP_150299859.1|896336_896678_-|glucose-starvation-inducible-protein-B
MSSKDNMSTSQAGQKGGQKTSQTHDKEFYQDIGSKGGQNSGGNFANDPERASEAGSKGGQNSGGNFANDPERASEAGSKGGQNSGGNFANDREKASEAGRKGGQNSHSGGRNS
>NZ_CP048629.1|WP_163981933.1|896095_896275_-|DUF2795-domain-containing-protein
MTRGLGGDSPANVSTYLKGIDFPASRDQQNGAERDVLDQMPEQQYDNMADVMKGYGEVN
>NZ_CP048629.1|WP_150299858.1|895511_896063_-|Clp-protease
MTSYVVHFTGPINSSTTGQLIRKCSDAVNSEASELIVKIATMGGECSYGFSLYNFLMSLPIPVHTHNLGTVESMGNIIYLAGERRTACKHSKFLFHPFHWTLHGSVDHSRMSEYAMSLDYDLQMYADIVRERTEDVGDSLDTLSYLTAAPRILNPSEAIATGLVHEVDELTAPRGATICCIHA
>NZ_CP048629.1|WP_163981932.1|894164_895322_-|alpha/beta-fold-hydrolase
MARSAHDRRHPMIQSRRITRFGLPIALIFGLLTVSGCSDSNSSPATASQGDGHGGAQVQVEHPSEHLRVTEFPGGLVAADLSRWREQVPDVKDIEIPASADGASQKALFYDSGSDQEKPLLLVLHSWSTDYLQNIDIPIAQFAVANDWVFMHPDFRGQNDGRPESTASDLVMSDMQDALDYARENANIDPQRIYLLGYSGGAMNAMHLASRHPDVFAGVSLWVPVYDLIAWYQWNDSQGAKYAGEIAGACGGEPEQGTDAYAECLERSPRSRLQDVRGEFPVHIAHGLGDETVPPEQALRAFNDLAKEDDRIAPDLIEQLNAERSIPEALSERSIHQDGDYPRFEEANANVVLHLQSGPADLVIFEGEHDMLYRPGLDWLARQHK
>NZ_CP048629.1|WP_163981931.1|893313_894150_-|penicillin-insensitive-murein-endopeptidase
MRSFFNPIRTALLVLSLMTVGILTITWPTDAAAQQDWSTAAGPVEGEPRIIGHHGGACLIGAQQLPEQGTGYQAVDLERRRHYGHPSLLDYIQALGERVDEEGFGPILVGDMAQPRGGPMSYGHVSHQSGLDVDIWFRLDLPALEPGRREMLEQPILVDPETGRMDPERWTDRHAELIHLAALDDRVARIFVDAAVKRDLCERNWEDRSWLRRIRPWPAHDEHLHVRLRCPAGSPECVDQPAPPPGEGCDNIQPTPRLARESSPRRTVPAACEAVLEQ
>NZ_CP048629.1|WP_163984171.1|892751_893291_-|sugar-O-acetyltransferase
MLRGELYDPLSPELVAARNRARLLTRAFNHTSDSEQAERDRLLRELVPDCGSDVTIESPFLCDYGDNITLGDKVFFNFNCVILDVARVVIGSNVLFGPGVQVYAATHPMSAAQRRTGLESGKPVTIGDDVWVGGGAVICPGVTVGAGTVIGAGSVVTRDIPAEVFAAGNPCRVIKAIAD
>NZ_CP048629.1|WP_163981930.1|892209_892746_+|DUF1523-family-protein
MRWIKRLGIVVIAFLVISAALGLHYILPKHDVVHVTGVEVKRVDDDGVVNAENPAEGPTRDMYFINTADPDSNKVRVYRNEDTGWGFPWYFKFDSADVQARAQDFSRNSNQLALIRYYGWRLQMFSTFPNITDIEATTTRDEPLPIFNILFFLVVGGVIMAVFLATRRRSQRRLDRPI
>NZ_CP048629.1|WP_163984170.1|890357_892100_+|bifunctional-protein-serine/threonine-kinase/phosphatase
MGRDQAPGPGHLRIAVGQYSDKGRKQTNQDFHGLCIPCEPLLSSKGIAIALADGISSSDVSHIASQSAVASFLEDYYCTAETWSVKKSVQRVLAATNSWLYAQTRQSQYRYDLDRGYVCTFSAMVVKSRTAHLFHVGDARIYRVQGNALEQLTEDHRMRVSADKSYLSRALGIDAWLDIDYRTLQVEVGDTFMLLTDGVYEHASSRFMLAAIAATPLDLDLAAQRMVEEALEQGSDDNLTAQIIRIEELPDQAADELHQRLTELPPPPILQPGEVFDGYRIIREVHASSRSHVYLAEDEQEPGFIVLKTPSTDLQDDSAYLERFLTEEWIARRIRSNHVLKPCPINRPRNYLYTLTEYIEGQTLAQWMLDNPTPDVETVRGIVEQIAKGLQAFHRAEMLHQDLRPENIMIDSSGTVKIIDFGSAKVAGLAEITAAVQHNDILGTAQYTAPEYFLGESGTPLSDMFSLAVITYQMLTGKLPYGAEVAKCRTRAAQNKLKYQSVLDDNREIPAWLDEVVRKALQPSPNKRYTELSEFVFELRRPSRELANRARPPLIKRNPVLVWQWISAVLLMVIVLLLMR
>NZ_CP048629.1|WP_150299862.1|898280_898526_+|hypothetical-protein
MEYRPASLVSPAIALVLGAALMLIFQNNIDQAEAAVPSYHGTNVSGFEWQSQAPVEAATPALRMTDNPLVQTPARQQRWVF
>NZ_CP048629.1|WP_163981936.1|898602_899652_+|glycosyltransferase
MKITAVILTYNRKDLLSQCLDAVSRQSRPCDEIIVVDNASTDGTEQMLRQLSLPNVTIHRLSENIGASGGFNAGFRLAYQSGTDQVWMMDDDVIPAEDALEQLLKADRLLAEKAIEPAFLLSTAYTEHGLVTNAPSIDQRPNRIAYENWPLTLEHGIAPVRRATFVSILVPRRTLATYGLPIASMFIWGEDTEYTLRITEHAPGFVVGSSKVVHLRQENGAIDIMAERNPNRVKYHRHYVRNEVFVARKYYRPRRVVISVLHQCKIALKLLSRGDFNKASVVFRGLLESGPFYPSTEAVDAPIANLGVTVDSYTPGSSIAGWEPPDQLTLVDLCDYHFSRQTMGSVNLT
>NZ_CP048629.1|WP_163981937.1|899915_901673_+|HAMP-domain-containing-protein
MASLEADLAAFARDPSTALGERIEQSLLELDAGWPVLQALQEDVGLIEAEAEIGRLIRYQTEIGGHFEHMRSYWERIGFEPGDGLLGELDHVSGQIAVVTEQEFDAELISKSELLAAPLLRFRLDGDLAQSSRFLKTHKQIKRYLTRDFSADDPANQPLLQGLFDQYKNHFMNLVLVTEQLGIDDSKGVRAALNASLDLFRTEVDRLLQTNQQVMQQREVHFRTLELGLTAAIVLAFLAVAWTLMRAIMRPIEALTHTLQHVRDTKDMSARFRQTGNDEINQAGHVFNEMLEGFQQLNQQIRHSSELVASASAQLSINSREAASSLNQQQTHVTQFAGAIDEMEYSMQDVSRNCSHGERIAALAQQQVEEGARLVETNIASLHVLANTARDTSAAVQQLEQDSAQITNILDILGAIAEQTNLLALNASIEAARAGENGRGFAVVADEVRNLARRSQQSAAEIAGQVSDLQRTARQAATMMNQSLTESETAVTHAGGILKAFRAITDGMHELGGKTSEIATAIEQQTVAVAGINERISSFSQLLGQSAVQVTQNAVASESITEQAHIMEQALARFATTHNDVNANS
>NZ_CP048629.1|WP_163981938.1|901824_903021_+|chromate-efflux-transporter
MLGETRQRPERSWQIFVIFLRLGLTSFGGPVAHLGYFREAFVIRRRWLSEKSYADVVALCQFLPGPASSQVGMALGLMRGGYPGMFAAWCGFTLPSALLLIAFALGLSEWGETVPGGMLDGLKIAAVAVVAQAVWGMGRNLCPDRQRVSMMAVATCLVLLVNSPLSQIAVIVLAAIIGTLLFKPAVNTKHETLPVMLSRGAGTLWLSLFGLLLLGLPVLAGAIPSQSLALVDAFYRSGSLVFGGGHVVLPLLQAEVVPTGWVDGETFLAGYGAAQAVPGPLFTFAGFLGAAMNHAPSGWPGGVIALLAIFLPSFLLIAGALPFWEALRTQPRAQAALMGINAAVVGLLLAALYDPVWTSAIHSPADFALALLALTALTGCKLPSWLVVLGCGGIGIVL
>NZ_CP048629.1|WP_150299866.1|903171_904761_+|ABC-F-family-ATPase
MISTANITMQFGAKPLFENVSVKFTGGNRYGLIGANGSGKSTFMKILGGELDPSGGQVMLEPNVRLGKLRQDQFAYEDFSVLNTVIMGHEELWKVHAERDRIYSLAEMSEEDGMKVAELETEFAEMDGYTAESRAGELLLGLGIPLDQHNGPMSEIAPGWKLRVLLAQALFSNPEVLLLDEPTNHLDINTIRWLEGVLTSRNSTMIIISHDRHFLNSVCTHMADLDFCELRLFPGNYDEYMTASTQARERLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKQIDKIQLDEVKPSSRVSPFIRFEQHKKLHRQAVILDQVSQGFDGVPLFKNLSLQIEAGERVAIIGPNGIGKTTLLRTMVGEMQPLAGTVKWAESADVGYFAQEHGDDFKYDCNLFEWMSQWTQGGEQLVRGTLGRMLFSNDDIDKSVKVISGGEQGRMLFGKMILKKANVMVMDEPTNHLDMESIEALNLALDNYPGTLIFVSHDREFVSSLATRIIELSADGVTDFSGTYEDYLREIGVAS
>NZ_CP048629.1|WP_163981939.1|905066_905438_+|hypothetical-protein
MINSQREQGQIERRLVSSLTQACETAKAEIVGFSWLTHEAERHAFPGSLQIIWVFDTRENLTRALETGQGKRMYQLSAEALKEADVALDTVKAHVRFDTEEECARVNGGDWQSRLASLRSASR
>NZ_CP048629.1|WP_150299868.1|905514_905934_+|RNA-polymerase-binding-protein-DksA
MSETALTTEQLLAQPEDDYMNEGQLAFFQKLLLEQRADLQVRIDAEFQALREYEPGSDIADSGSAEEQRQWQLRLLEREKKLLDKIDQALDRIADGSYGWCAETGEPIGLKRLLLRPTATLSIEAKEREEEMERHLREA
>NZ_CP048629.1|WP_150299869.1|906059_906257_+|hypothetical-protein
MAFHPDNATDSTSSLRRQRRLEQDKKRMAYRRAIEEYRDSQVLHKQVCDFHDLLGSQLRDSSHWS
>NZ_CP048629.1|WP_163981940.1|906288_907428_-|glycerate-kinase
MKLVIAPDSFKESLSADDVASAIARGWQTVYPDADIRLCPMADGGEGTVDAVLAASGGERRELRVCGPLGQPVQAHWGWLEDGQAVIEMAAANGLHWIEPAQRDARITTSYGTGELILAALDAGARRIILGIGGSATNDGGAGLLQALGVRLLDAAGEPLATGGAALINLQRIELDGLDPRLTSVEMLVAADVDNPLCGPRGASHVFGPQKGATPEQVEQLDRALGHFADVMAATLGEDHRDVPGVGAAGGLGFAARSVLSASFRPGIELVAELSGLAAAMQGADLVITGEGRLDGQSLHGKTPVGVARVAQAAGVPVIALVGSLGDGYQRVYQAGIEAAFSLAPGPVSLEQAMAEADSQLQSRAADIARLWRLAARSV
>NZ_CP048629.1|WP_163981941.1|907427_908786_-|GntP-family-permease
MGLVLILIALIVFIVLATTRLKLHPFLALLGAALLAGFAYQLPALEIVGHITRGFGGILGYIGIVIVFGTIIGVILERSGAAITMAESVISLLGERFPTLTVSIIGYLVSIPVFCDSGYVILNSLKNALAARMKVSVVAMSVALATGLYATHTFVPPTPGPIAAAGNLGLESSLGLVILVGLVVSFVTAMAGMLWANRFIGKDIELEDNGAPIMDSNDYQAMRDSYGQLPSAAKAFAPIFVPIALICLGTVANLPARPVGEGGLYTLIVFLGQPILALAIGLALACTLLKSDNKRQELHDRVAQGIVASAPILLITGAGGAFGTVLSATPLGDYLGQTLSSLGIGLFMPFLVAAGLKTAQGSSTVSLVTTSALVAPLLGQLGLDSEMGRVLTVMAIGAGAMTVSHANDSFFWVVTQFSRMKVATAYQAQTVATLIQGVVGMFTVWLLSLVLL

Crispr_ID: NZ_CP048629_2

• CRISPR_ID: NZ_CP048629_2
• CRISPR_location: 1192707-1192855
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NZ_CP048629_2

Consensus_repeat	Method
GCCTTCGGAGGGCGGTACTCTATCCAGCTGAGCTACGGGTGCGTT	CRISPRCasFinder

spacers of NZ_CP048629_2

>2.1|1192752|59|NZ_CP048629|CRISPRCasFinder
ATAGGAAAAACGCTGCATTCTGACACTTAGCCGCACCGGGGTTCAAGTCGATGAGTATT

CRISPR arrays and Neighbor proteins around NZ_CP048629_2

CRISPR arrays

The CRISPR arrays of NZ_CP048629_2

>merge|NZ_CP048629|2|1192707-1192855|CRISPRCasFinder
GCCTTCGGAGGGCGGTACTCTATCCAGCTGAGCTACGGGTGCGTTATAGGAAAAACGCTGCATTCTGACACTTAGCCGCACCGGGGTTCAAGTCGATGAGTATTGCCTTCGGAGGGCAGTACTCTATCCAGCTGAGCTACGGGTGCGTT

>NZ_CP048629|2|2|1192707-1192855|CRISPRCasFinder
GCCTTCGGAGGGCGGTACTCTATCCAGCTGAGCTACGGGTGCGTT	ATAGGAAAAACGCTGCATTCTGACACTTAGCCGCACCGGGGTTCAAGTCGATGAGTATT
GCCTTCGGAGGGCAGTACTCTATCCAGCTGAGCTACGGGTGCGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048629.1|WP_150300050.1|1201978_1202434_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_008173755.1|1188585_1188987_-|Cd(II)/Pb(II)-responsive-transcriptional-regulator	unknown	unknown	gnl|CDD|133411
NZ_CP048629.1|WP_093396590.1|1199787_1200126_+|P-II-family-nitrogen-regulator	unknown	unknown	gnl|CDD|182629
NZ_CP048629.1|WP_163982104.1|1197451_1198957_-|YifB-family-Mg-chelatase-like-AAA-ATPase	unknown	unknown	gnl|CDD|223679
NZ_CP048629.1|WP_150300086.1|1193123_1193507_+|c-type-cytochrome	unknown	unknown	gnl|CDD|227001
NZ_CP048629.1|WP_150300047.1|1198987_1199245_-|accessory-factor-UbiK-family-protein	unknown	unknown	gnl|CDD|377337
NZ_CP048629.1|WP_028615085.1|1186894_1187140_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_150300045.1|1195754_1197443_+|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|238923
NZ_CP048629.1|WP_150300044.1|1193567_1195574_-|DNA-helicase-Rep	unknown	unknown	gnl|CDD|130146
NZ_CP048629.1|WP_163982101.1|1190596_1191235_+|peroxiredoxin	unknown	unknown	gnl|CDD|239314
NZ_CP048629.1|WP_001611016.1|1187147_1187426_-|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NZ_CP048629.1|WP_058089840.1|1189084_1189981_+|cation-transporter	unknown	unknown	gnl|CDD|224151
NZ_CP048629.1|WP_163982103.1|1191972_1192260_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_150300051.1|1202610_1202922_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_163982105.1|1201510_1201927_+|YjbQ-family-protein	unknown	unknown	gnl|CDD|223509
NZ_CP048629.1|WP_163984190.1|1200169_1201417_+|ammonium-transporter	unknown	unknown	gnl|CDD|274697
NZ_CP048629.1|WP_084672176.1|1185553_1185892_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|238042
NZ_CP048629.1|WP_022964284.1|1186274_1186898_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NZ_CP048629.1|WP_163982102.1|1191295_1191889_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_058089839.1|1189984_1190497_+|signal-peptidase-II	unknown	unknown	gnl|CDD|173237

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP048629.1|WP_084672176.1|1185553_1185892_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	3.7e-11	38.2	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048629.1|WP_008173755.1|1188585_1188987_-|Cd(II)/Pb(II)-responsive-transcriptional-regulator	gnl|CDD|133411	cd04784, HTH_CadR-PbrR, Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators. Helix-turn-helix (HTH) CadR and PbrR transcription regulators including Pseudomonas aeruginosa CadR and Ralstonia metallidurans PbrR that regulate expression of the cadmium and lead resistance operons, respectively. These proteins are comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains have three conserved cysteines which form a putative metal binding site. Some members in this group have a histidine-rich C-terminal extension. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	4.99546e-64
NZ_CP048629.1|WP_093396590.1|1199787_1200126_+|P-II-family-nitrogen-regulator	gnl|CDD|182629	PRK10665, PRK10665, P-II family nitrogen regulator.	1.17226e-56
NZ_CP048629.1|WP_150300086.1|1193123_1193507_+|c-type-cytochrome	gnl|CDD|227001	COG4654, COG4654, Cytochrome c551/c552 [Energy production and conversion].	1.01568e-20
NZ_CP048629.1|WP_150300047.1|1198987_1199245_-|accessory-factor-UbiK-family-protein	gnl|CDD|377337	pfam04380, BMFP, Membrane fusogenic activity. BMFP consists of two structural domains, a coiled-coil C-terminal domain via which the protein self-associates as a trimer, and an N-terminal domain disordered at neutral pH but adopting an amphipathic alpha-helical structure in the presence of phospholipid vesicles, high ionic strength, acidic pH or SDS. BMFP interacts with phospholipid vesicles though the predicted amphipathic alpha-helix induced in the N-terminal half of the protein and promotes aggregation and fusion of vesicles in vitro.	8.05532e-16
NZ_CP048629.1|WP_150300045.1|1195754_1197443_+|EAL-domain-containing-protein	gnl|CDD|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.41689e-113
NZ_CP048629.1|WP_150300044.1|1193567_1195574_-|DNA-helicase-Rep	gnl|CDD|130146	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep. Designed to identify rep members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP048629.1|WP_163982101.1|1190596_1191235_+|peroxiredoxin	gnl|CDD|239314	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes and lung. The seed-specific plant 1-cys PRXs protect tissues from reactive oxygen species during desiccation and are also called rehydrins.	1.44197e-122
NZ_CP048629.1|WP_001611016.1|1187147_1187426_-|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.7411e-09
NZ_CP048629.1|WP_058089840.1|1189084_1189981_+|cation-transporter	gnl|CDD|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	3.51996e-32
NZ_CP048629.1|WP_163982105.1|1201510_1201927_+|YjbQ-family-protein	gnl|CDD|223509	COG0432, COG0432, Uncharacterized conserved protein [Function unknown].	2.30329e-51
NZ_CP048629.1|WP_163984190.1|1200169_1201417_+|ammonium-transporter	gnl|CDD|274697	TIGR03644, marine_trans_1, probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.	0
NZ_CP048629.1|WP_163982104.1|1197451_1198957_-|YifB-family-Mg-chelatase-like-AAA-ATPase	gnl|CDD|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP048629.1|WP_022964284.1|1186274_1186898_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.38373e-20
NZ_CP048629.1|WP_084672176.1|1185553_1185892_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	2.17152e-12
NZ_CP048629.1|WP_058089839.1|1189984_1190497_+|signal-peptidase-II	gnl|CDD|173237	PRK14776, PRK14776, lipoprotein signal peptidase; Provisional.	3.10977e-107

Protein sequences

>NZ_CP048629.1|WP_163982103.1|1191972_1192260_+|hypothetical-protein
MPLLIIPVLIVFIWAAPRFFKWLLLFSVMAGGLFFVGLTGLSMAYGARKGGVNEGMFEEWSIHLLMYFFTVPAGIIVLGALVGLTLKLGQKSRLQ
>NZ_CP048629.1|WP_163982102.1|1191295_1191889_+|hypothetical-protein
MQSEKLDLLIEMARDVKVQGDIRRHAEFSSVLKTIRQYSEENDIGMLKGQLAGLHTQYAETKLMLRHAAAGVGTKGGLDFIDVMRNLQERMMYLGFLQAHVQQRIGSPGYAYNALRDLKQDWLEINSVLVDTVAANNEWVEGLPYEAAENIVSFLEYRKEVTPAIEYQSSLLGFAVDNPSALQVLNEDVSEIRFIAA
>NZ_CP048629.1|WP_163982101.1|1190596_1191235_+|peroxiredoxin
MTLQLGETAPDFTVASTEGNIQFHEWLGDDWAVLFSHPADYTPVCTTELGAFAKRKDEFASRGVKLIGVSVDPLDSHKDWAKDIEKTQGKGLNFPLLADKDQVVADQYGMIHPKADPKVTVRTVFIIDSAKKIRLMLTYPPSTGRNLDEILRVIDSLQLTDNHKVATPVDWKNGEDVIIVPSLSNEEAKKRFPEGWDEQTPYLRVTRQPGRK
>NZ_CP048629.1|WP_058089839.1|1189984_1190497_+|signal-peptidase-II
MSIVAKKHLPYGLLAISGLIAASDQVVKWLVQQSMAYGESIPVTPFFNWVHVWNTGAAFSLFADGGGWQRYFLIAIAVVVSIVLIRLILQCRRRGEAIAYSLILGGAMGNLIDRIFRGYVVDSFDVYWQSWHWPAFNLADIAIVLGTVLFLYVSFIPEKSGTNVELDGSG
>NZ_CP048629.1|WP_058089840.1|1189084_1189981_+|cation-transporter
MSKSCEDACGCDTTPAEGNTGSKASEASGNWISVYTVPKMDCPSEERMIRLALNGFEDIRGLSFELSDRQLKVVHDGEAEPITAKLATLGLGASLQETAAADPESIKAVGDTAISAEQESGTLRWLLGINAVLFVVEMTAGLIAHSTGLIAESLDNFADAAVYGLALYAVGHSVKMQVRAAHLAGVLQLILAVGVLAEVVRRFVFGSEPESLVMMGIAFIALIANTTCLLLISKHREGGAHMKASWIFSANDVVINLGVITAGALVAWTGSNYPDLIIGSIAGVIVLNGARRILALKG
>NZ_CP048629.1|WP_008173755.1|1188585_1188987_-|Cd(II)/Pb(II)-responsive-transcriptional-regulator
MRIGQLARSVGVDTQTIRFYEREGLLPPPDRQDNGYRIYTERHVERLAFIRRCRILELSLAEIHELQRYQGAPHQPCRAINTLLDDHIAQVRSQITDLQVLEKQLVSLRASCNDDREIEACGVLEGLSEGSMQ
>NZ_CP048629.1|WP_001611016.1|1187147_1187426_-|diguanylate-cyclase
MGDSKKALAELEQKEFPQVGQVTCSIGFAAVDPAQPPANILDNADQALYYAKGNGRNRTCHYESLVETGQIARRDNMEGNASVDFDIDALFG
>NZ_CP048629.1|WP_028615085.1|1186894_1187140_+|hypothetical-protein
MIRVPYVLLLPFQAFGIALDTVKTLAFETGSDVTTQLDFAPWQMNAIALGYQFGYLMLPFIAAAGIWILMNRELLDTLRSQ
>NZ_CP048629.1|WP_022964284.1|1186274_1186898_+|class-I-SAM-dependent-methyltransferase
MSFYEDRILPHIIDKACSMGQVMKLRSQLVPRARGRVLEVGMGSGINLEFYNQDLVEMVYGLEPSEGMRRKALPNLGRSPVRVEWLDLPGEKIPLQDNSVDTVLLTFTLCTIPDWHTALLQMKRVLKPGGDLLFLEHGEAPHDTTRKWQHRITPGWRKLAGGCHLNRHIAELIEHAGFEIQELENLYMPNAPKIAGYIYKGRATKPE
>NZ_CP048629.1|WP_084672176.1|1185553_1185892_+|winged-helix-turn-helix-transcriptional-regulator
MSQETRLRIVRLLVVKGANGLPAGEIGDALGGVSSSRLSFHLNHLEHAGLLEKRRQGRSIIYSAIFPVLADLIAFLMHDCCDGHCAYCDKAIELFAQCEGRPTSPGTVDSKI
>NZ_CP048629.1|WP_150300086.1|1193123_1193507_+|c-type-cytochrome
MDNEAIAERIQPYGEVCVAGEECAEAVAAAAPAGGDAADTASAGGSEGETLFNSKPCGACHSVDNKLVGPALKEVAAKYAGQDDAVATLVTSITQGSSGKWGAIPMPPNAVSEEEATTLAEWVLSLN
>NZ_CP048629.1|WP_150300044.1|1193567_1195574_-|DNA-helicase-Rep
MATLNPRQNEAVRYISGPMLVLAGAGSGKTSVITRKIAYLVKECGIRAKNIVAVTFTNKAAREMKERVGQLIQGSEARGLTVSTFHNLGLNIIRTEHKRLGYKPGFSIFDQQDAQALITDLMHRDYGADEGIEGIQSMISTWKNDLITPEEALAKAKSPQEQTAASVYMHYNRTLKAYNAVDFDDLILIPVMLFRDHPDVLEKWQFRIRYMLVDEYQDTNATQYLLVKMLVGREARFTVVGDDDQSIYAWRGARPENLAQLKDDFPGLKVVMLEQNYRSTSRILRAANTLIANNPHVFEKQLWSELGYGDPIRVIRCRNEEAEAERVATDIQTQNLKHRRAWKEFAILYRGNHQSRLIELKLQHHQIPYHLSGGTSFFARQEVKDLMAYFRLLVNLDDDNALLRVVNVPRREIGPATLEKLGNYANDRGISLFKACDEIGLAEQMEPRYHERLQRFSRWLDNVRQQCMDGNPIEALHRMIVDLDYENWIRQNCSSDEIAAKRMGNVWFLLDALKSTIERDETGETTFEDAIAKLVLRDMLERHEEEEDTDRVQLMTLHASKGLEYPHVYILGMEEEILPHRSSIEADSVEEERRLAYVGITRARKNLTFSFAARRRQFGEIIDCLPSRFLDELPSEDLEWEGTEDVPVEQKQARGNTALSDIRSLLGR
>NZ_CP048629.1|WP_150300045.1|1195754_1197443_+|EAL-domain-containing-protein
MLADRSTQLIVVLDKDDGAFAQLCRTLSATHAGIFELRRCDGWSRAYAMIEAGSVAAVLARGDLLNPPGGCTVPLIQLTDTSSVAALPEGVDDSIWIQARTSELIRCLEYSIERHGLQTALDRAASYDPLTGCCNRQLLNDRLRQGMHRASRNKQPLAVLVIDLDNFRHVNDTLGHTAGDRIIREVSERLRRVLRSTDTVGRMGSDEFGVVVEDYSESANILLIAQKVTNELAEPFNIDGESLLLGCSIGIASYPEGGLTVDGLLLHAHMAMQQAKGQRGCNFHFYDDRVNLHASSLIEFEAALRLALRRNQFELHYQPRVDLRSGQIVGLEGLIRWRHPERGLLGPNEFIPLAEETGLIVPMGYWVMARACHDLNQLSRRGFADIHIAVNVSFRQFQDSQLLSNVRRVLRTTGIDPHRLEFELTETAIMQRSEQVLAAMQGITELGVRFSLDDFGTGYSSFVHLHSLPISLLKIDRSFVRKISEIEGDRKLVNAVVDMGHSLGLAVVAEGVEERSQLDALTAMGCDQVQGYFISPALPFEELCYFLDAYRMGREDDLLGSL
>NZ_CP048629.1|WP_163982104.1|1197451_1198957_-|YifB-family-Mg-chelatase-like-AAA-ATPase
MSLAIVHSRAKLGVQAPAVTVEVHLANGMPSLTLVGLPETAVRESKDRVRSALQNARLEFPGLKRITINLAPADLPKEGGRFDLAIALGLLSASGQIPADVLDQCECLGELALSGELRPVQGVLPAALACRDQGRTLLLPRANAMEAALVRGLHIVAADHLLELCEHLRGERTLEPVSPNPAPELPRYHADLDEVQGQAQAKRALIVAASGGHNLLLFGPPGTGKTLLASRLPGILPQLVEGEALEVAAIQSVCGQGPLQTWPTRPFRAPHHGASAAALVGGGSQPRPGEISQAHRGVLFLDELPEFDRKVLEMLREPMESGEIHIARAREQLSFPARFQLIAAMNPCPCGYQGDPSGRCRCSAEQVERYRGKLSGPLLDRIDLHVAMHNEAFSLANKEPGKPNSAEAAAQVAAARQQQQQRQGRLNAHLDLAGLRDHCPLKDEDARWMERAIEQLGLSHRASHRALKVARTLADLDNQTAIGRAHLAEALQYRQLDRRPS
>NZ_CP048629.1|WP_150300047.1|1198987_1199245_-|accessory-factor-UbiK-family-protein
MLHKVLIGAVSSQAARLLINEKGLPGPDVEQHLKALLQSALSKLDVVSREEFETQQLVLERTRARLEALEKRVEVIEQGTQAPST
>NZ_CP048629.1|WP_093396590.1|1199787_1200126_+|P-II-family-nitrogen-regulator
MKLVTAVIKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIGDDMLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
>NZ_CP048629.1|WP_163984190.1|1200169_1201417_+|ammonium-transporter
MMDISQVTYALDTFYFLLCGILVMWMAAGFAMLEAGLVRAKSTTEILAKNIALFAIASVMYLLIGYYIMYSSDSPIFPSLGFLIGSENTADAALAGGDDAPYYSSRADFFFQIVFAGACMSIVSGAVAERMKLWSFLLFAVVMTGFIYPIQGAWSWGGGWLSDVGYSDYAGSGIVHMAGAAAALAGVLVLGPRRGKYGPNGQVNAIPGCNLALATLGIFILWMGWFGFNGGSELKISDIDSANNVAQVLVNTNMSAAGGLIAAMIVSRILFGKTDLTMILNGALAGLVSITADPLSPSALSAMMIGAVGGVIVVFSVLALDKLKQDDPAGAISAHGSAGIWGVMAVPLTNAEATFGGQLAGVVGIFLWVFLASLLVWYIIKAIIGVRISEEEEYEGADISECGMEAYPEFTSTKG
>NZ_CP048629.1|WP_163982105.1|1201510_1201927_+|YjbQ-family-protein
MWLQRTISLKPRSRGFHLVDEEIVSALPELAKVEMGMLHLWLLHTSASLSINENADPLVRGDLEAFLRRLVPDDTSYFKHTYEGPDDMTAHVKASLLGVQLSVPVTKGRLATGTWQGIYLGEHREDAGSRRVLATLQG
>NZ_CP048629.1|WP_150300050.1|1201978_1202434_+|hypothetical-protein
MQAETFQYLLEWTTKFHNHMATCLEEGLDEQQDDCAKWLMKYVAEHERTLATEVEGFKRQADPKALNTWLYEHLTETLPPNDRRKLPFGTMSFEDIASEVVDVHNQIVNTYESMANKAAIPEAQELMEKVLDAEQGVLRQMADRISSSREM
>NZ_CP048629.1|WP_150300051.1|1202610_1202922_+|hypothetical-protein
MSDDDIEDQEQDQDQELTGLNDPNVDDTSDDDEDAPVVKTRKKAPVEDPLEGLSIEAKAREREMLERQIAEFMARGGQVQEIDSNVVSDPPRKPDSKYGSRPI

Crispr_ID: NZ_CP048629_3

• CRISPR_ID: NZ_CP048629_3
• CRISPR_location: 3679360-3679516
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048629_3

Consensus_repeat	Method
TCCTGGGGGTGTAGTGCGCCTGCGCTACGCCAGGTTTATCGCCACAACGAAGCTT	CRISPRCasFinder

spacers of NZ_CP048629_3

>3.1|3679415|47|NZ_CP048629|CRISPRCasFinder
CAGGCTCGCCGCTGACCAACGCCGAGACCAGATTGAACGTACGTTTC

CRISPR arrays and Neighbor proteins around NZ_CP048629_3

CRISPR arrays

The CRISPR arrays of NZ_CP048629_3

>merge|NZ_CP048629|3|3679360-3679516|CRISPRCasFinder
TCCTGGGGGTGTAGTGCGCCTGCGCTACGCCAGGTTTATCGCCACAACGAAGCTTCAGGCTCGCCGCTGACCAACGCCGAGACCAGATTGAACGTACGTTTCTCCTGGGGGTGTAGTGCGCCTGCGCTACGCCAGGTTTATCGGCACAACGAAGCTT

>NZ_CP048629|3|3|3679360-3679516|CRISPRCasFinder
TCCTGGGGGTGTAGTGCGCCTGCGCTACGCCAGGTTTATCGCCACAACGAAGCTT	CAGGCTCGCCGCTGACCAACGCCGAGACCAGATTGAACGTACGTTTC
TCCTGGGGGTGTAGTGCGCCTGCGCTACGCCAGGTTTATCGGCACAACGAAGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048629.1|WP_163983860.1|3669230_3670736_-|DUF3237-domain-containing-protein	unknown	unknown	gnl|CDD|378678
NZ_CP048629.1|WP_163983858.1|3665207_3667817_+|TRAP-transporter-permease	unknown	unknown	gnl|CDD|227012
NZ_CP048629.1|WP_163983859.1|3668401_3668770_-|PH-domain-containing-protein	unknown	unknown	gnl|CDD|377953
NZ_CP048629.1|WP_163983868.1|3682969_3684874_-|molecular-chaperone-HtpG	unknown	unknown	gnl|CDD|235366
NZ_CP048629.1|WP_163984315.1|3668266_3668395_+|gamma-glutamylcyclotransferase	unknown	unknown	gnl|CDD|377602
NZ_CP048629.1|WP_163983865.1|3679660_3680440_-|dienelactone-hydrolase-family-protein	unknown	unknown	gnl|CDD|223489
NZ_CP048629.1|WP_163983863.1|3675002_3678116_-|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl|CDD|223911
NZ_CP048629.1|WP_163983866.1|3680621_3681326_+|succinate-dehydrogenase-iron-sulfur-subunit	unknown	unknown	gnl|CDD|235652
NZ_CP048629.1|WP_163983872.1|3689580_3691233_-|glucose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|234679
NZ_CP048629.1|WP_163983867.1|3681366_3682272_+|decarboxylating-6-phosphogluconate-dehydrogenase	unknown	unknown	gnl|CDD|236582
NZ_CP048629.1|WP_150299112.1|3692551_3693445_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl|CDD|224131
NZ_CP048629.1|WP_163983870.1|3687057_3688074_-|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl|CDD|177883
NZ_CP048629.1|WP_163983864.1|3678137_3679217_-|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NZ_CP048629.1|WP_163983861.1|3671177_3672962_-|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl|CDD|227590
NZ_CP048629.1|WP_163983869.1|3685010_3687014_-|polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|224011
NZ_CP048629.1|WP_163983862.1|3673472_3674825_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048629.1|WP_163983871.1|3688176_3689571_-|phosphomannomutase-CpsG	unknown	unknown	gnl|CDD|185312
NZ_CP048629.1|WP_150299094.1|3664169_3665144_+|TAXI-family-TRAP-transporter-solute-binding-subunit	unknown	unknown	gnl|CDD|270286
NZ_CP048629.1|WP_163983873.1|3691242_3692538_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|223936
NZ_CP048629.1|WP_150299096.1|3667809_3668238_+|universal-stress-protein	unknown	unknown	gnl|CDD|366180

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048629.1|WP_163983860.1|3669230_3670736_-|DUF3237-domain-containing-protein	gnl|CDD|378678	pfam11578, DUF3237, Protein of unknown function (DUF3237). This family of proteins has no known function.	1.85539e-22
NZ_CP048629.1|WP_163983858.1|3665207_3667817_+|TRAP-transporter-permease	gnl|CDD|227012	COG4666, COG4666, TRAP-type uncharacterized transport system, fused permease components [General function prediction only].	4.75691e-125
NZ_CP048629.1|WP_163983859.1|3668401_3668770_-|PH-domain-containing-protein	gnl|CDD|377953	pfam08000, bPH_1, Bacterial PH domain. This family contains many bacterial hypothetical proteins. The structures of Structure 3hsa and Structure 3dcx show similarities to the PH or pleckstrin homology domain. First evidence of PH-like domains in bacteria suggests role in cell envelope stress response.	6.31772e-37
NZ_CP048629.1|WP_163983868.1|3682969_3684874_-|molecular-chaperone-HtpG	gnl|CDD|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NZ_CP048629.1|WP_163984315.1|3668266_3668395_+|gamma-glutamylcyclotransferase	gnl|CDD|377602	pfam06094, GGACT, Gamma-glutamyl cyclotransferase, AIG2-like. GGACT, gamma-glutamylamine cyclotransferase, is a ubiquitous enzyme found in bacteria, plants, and metazoans from Dictyostelium through to humans. It converts gamma-glutamylamines to free amines and 5-oxoproline.	7.24103e-06
NZ_CP048629.1|WP_150299094.1|3664169_3665144_+|TAXI-family-TRAP-transporter-solute-binding-subunit	gnl|CDD|270286	cd13568, PBP2_TAXI_TRAP_like_3, Substrate binding domain of putative TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This subgroup includes uncharacterized periplasmic binding proteins that are related to Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family. TRAP transporters are comprised of an SBP (substrate-binding protein) and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function.	5.14378e-165
NZ_CP048629.1|WP_163983863.1|3675002_3678116_-|efflux-RND-transporter-permease-subunit	gnl|CDD|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP048629.1|WP_163983866.1|3680621_3681326_+|succinate-dehydrogenase-iron-sulfur-subunit	gnl|CDD|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	1.09428e-152
NZ_CP048629.1|WP_163983872.1|3689580_3691233_-|glucose-6-phosphate-isomerase	gnl|CDD|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
NZ_CP048629.1|WP_163983867.1|3681366_3682272_+|decarboxylating-6-phosphogluconate-dehydrogenase	gnl|CDD|236582	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP048629.1|WP_150299112.1|3692551_3693445_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl|CDD|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	4.90715e-150
NZ_CP048629.1|WP_163983870.1|3687057_3688074_-|UDP-glucose-4-epimerase-GalE	gnl|CDD|177883	PLN02240, PLN02240, UDP-glucose 4-epimerase.	0
NZ_CP048629.1|WP_163983864.1|3678137_3679217_-|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.26587e-70
NZ_CP048629.1|WP_163983873.1|3691242_3692538_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl|CDD|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	9.50802e-95
NZ_CP048629.1|WP_163983861.1|3671177_3672962_-|ABC-transporter-ATP-binding-protein/permease	gnl|CDD|227590	COG5265, ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP048629.1|WP_163983869.1|3685010_3687014_-|polysaccharide-biosynthesis-protein	gnl|CDD|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_CP048629.1|WP_163983871.1|3688176_3689571_-|phosphomannomutase-CpsG	gnl|CDD|185312	PRK15414, PRK15414, phosphomannomutase.	0
NZ_CP048629.1|WP_163983865.1|3679660_3680440_-|dienelactone-hydrolase-family-protein	gnl|CDD|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	4.08599e-47
NZ_CP048629.1|WP_150299096.1|3667809_3668238_+|universal-stress-protein	gnl|CDD|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	1.53942e-23

Protein sequences

>NZ_CP048629.1|WP_163983864.1|3678137_3679217_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MSKPIGAWKQLFLLIACSLSLPLLAQQEPLAVAVAEVRQWEMANQIEALGTLRASETADITADITETVSAIHFDDGQRVDKGELLVSLTNSEQQAQLNEARATLADAERQLERTRGLVERRVLPQQELENWTRDRDIARAQLQAVEARLADRQIRAPFDSVVGLRQISVGTLLTPGTLVARLHDDSQMKLDFSIPEIKLSQVAPGRTVIATTRAFPDASFRGEVTALDNEVDPATRSVEVRASLPNPEGVLRPGMLMSVRLRGATREALVIPEEALLPLGSRQFVMLVNEKDGQLITERREVVIGTREPGIVEVEEGLEAGQRVVTHGNFRVQSGQPIRIIAEQQPGESTESVLSDDAP
>NZ_CP048629.1|WP_163983863.1|3675002_3678116_-|efflux-RND-transporter-permease-subunit
MILSDTAVVRPVFATVVAMLLVIFGLVAYSALPLREYPDIDPPIVTIETQYIGAAASVVDSQITQVIEESVAGIEGIEFIESSSEDGQSEITIRFSISRGVDEAANDVRDRVSSVADRLPVEADPSEVEKLDANQDVIIWWNLTSDRLTLPELTDYAERYLVDRFSTLSGVARVRVGGDQAYAMRVWLDREALAARDLTVADVEQALRAENVELPAGTIESIDRQFTVRVARSFTEADEFARLVVARGDNGYLVRLRDVSRVERGTEEDRNLFRGNTVPMVGLGLARQSTANTLDISRASRELVDKINPTLPEGMNIQSSFDSSVFIEGAVEEVFSTLVVALILVVLTIFLFLGSPRAILVPAVTLPVSITATFIGLMLFGFTVNLLTLLALVLAIGLVVDDAIIVLENVRRRIDEEGETPLVAAFYGARQVAFAVVSTTLVLIAVFVPIAFLQGDVGRLFSEFALTMAAAVVLSSFVALTLSPMLASKLLKAHEKENWLTRWVELGLRSSRAFYASILVRVLRHRVLALLVFAGMFGGSAWLFSQLPSEYTPREDRGAFMIIVNGPEGATYEYMREYMDEIESRMMEFVEAGEVSRLLIRAPRSFGASTSFNSGMAIVVLEKWGERRPASEVMADVQKRMADLPGVRAFPVMRQGFGSSQDQPFRLVLGGASSYEELAQWRDILLEKIREDNPGLSNIDSDYKETQPQLEVSVDYDRAATLGVNVSHIGRTLETMLGSRRVTTYIDRGEEYDVILEAERDDKRSADSLENIYVRSDTTGELIPLSNLVTLEEFAGSTTLNRYNRNRAITIEASLDDGVALGDALDHVEQLARGNLPETLVIDFKGQSRDLREAGGSLMFVFGLGLVVVFLVLAAQFESFVHPLIIMLGVPLAIGGAILGLWLTGNSLNLYSQIGMVMLIGLAAKNGILIVEFANQLRDAGKGFDDALLEAATLRLRPILMTGVTTVAGALPLVFAVGAGAETRAVIGIVVVFGVSISTLLTLFVIPVLYSLLARKTGSPGDVRHKLEQEDRASEVR
>NZ_CP048629.1|WP_163983862.1|3673472_3674825_-|hypothetical-protein
MMSQPELPGWRWGPFTFRLPFYHTRFYWQEALQGLFIAAATGLSLIPLMTMFFGLSFEEAVAVSMIHSILIGSALIVFGEPYAPGWITPALPLVLAFVLGNYEDPTMRFQAMTAVSLNFALLLFVLGITGLGKKFVFWLPDTLKAGIILGAAIAALKRVFIDDAERFLLQQPIATTLACAVCLVFAFSLPMQKLKENYRFFALLGALGLLPGFILAAVIGPMVGEVSYDIQWGFMVPPVVETWAKVSPFMIGWPSMDMFIQSMPLALITYVIFFGDLVTGNEIIREGLQTRKDEHIDINPTRSHLSMAIRNALMGVAAPFFPTQGSMWVGVHVIVMQRWKSGKSAMNSLHSGLASYYAMGIPLLFFVLPLLTGLRPLLGIALSLTLVLTGFACAYIAMAIPRNNASRGAVLLIGAGLAFFEPWIGLLFGIATTLLLVGWDRNVEPIPQEE
>NZ_CP048629.1|WP_163983861.1|3671177_3672962_-|ABC-transporter-ATP-binding-protein/permease
MRPSSDSQYAGGPVNWSIISSLAPYLKEFRGRVAVAMGFLLIAKLAGVAVPWALKLIVEHFESAADALVLVPVALLAAYGLLRFSSVFFSELRDAVFARVAERAMRRISLRVFEHLHRLDLGFHLSRRTGGLARDIERGTSGISFLLRFMVFNILPTLVEIGLIAVILLINFSPMYAATVLGAVLIYGGFSIWCTEWRNRFVRESNKMDNRSNTRAVDSLLNYETVKYFGNEAFEAQEYDRHLEGWEAARMKNRLSLAALNSGQAFIIAGSVTLMMFMAAGQVANGDMSLGELVMINAYMIQLFIPLNFLGFIYREIREALTNIERLFGLLGTPVKVGDAPDAAPLELRGGAVKFEGVSHAYNEERLILDNLSFEIPAGQTLAIVGPSGAGKSTLARLLFRFYDVSQGAIRIDGQDIRSVTQDSLRRAIGVVPQDTVLFNDTIGYNIAYGCPGASEDEIWRVLRMAQLEDFVSRLPQGLDTQVGERGLKLSGGEKQRISIARVLLKDPAILILDEATSSLDTHAERLILDSLNQISRRRTTLAIAHRLSTIVHADNILVLEQGRVVEQGNHARLLEANGAYAQLWANQQWEAGG
>NZ_CP048629.1|WP_163983860.1|3669230_3670736_-|DUF3237-domain-containing-protein
MNDTDRSRFPTYSAAGRIRRGVVGLALACTAPYAVSDVLYQEHFTGGSAGFSSEGRVTVNNGYARLHGSFSATSSITSEVIRTKGASGLSLTYSRETSGLEAGESLIAEVSVDGGAFTVLEFSRDASGSTTLSLPPAESELRLRFSLDANTYFDRAELRSIVLNGEVGEGNDDCGGAPCEEPPTGERTTIVPDSSWDCGMPDGIPDPSSGELLFTALLPTGSVKDLGQTPYGQRSVVTVNGGRLNDTSSDLNGSIQSGALDFNLALPSGAVEHESRYTIRTADGTQVYMRNCGVADGDNVRFVADFEAPNNSSLNWLHQGTYVGVREQTDAGVRLSLYQNPQPGGNDQVVTTPSDNGLRQQSWDCPALPAGADSGNQILQARVGIGGFQSIGDSKYGSRRIIPITGGSFSGDFAGEVNPGGADYQLTVDGDLSLEARYTLQTSDGETIVVRNCGDYGNSSLTRPLFEASTSGKYAWLNDKGFVGTITPGLSSVTITVFDRQ
>NZ_CP048629.1|WP_163983859.1|3668401_3668770_-|PH-domain-containing-protein
MIDFENKGFFKLKQNKEYADRVAELLMEGEQVIDSYKSMRDGVVFTNKRIIAVNVQGLTGSKKDFTSLPYKEIVAYSIETSGTFDIDSELQIYFSSLGKVQFEFTGRTAIVEISKHISRHAL
>NZ_CP048629.1|WP_163984315.1|3668266_3668395_+|gamma-glutamylcyclotransferase
MHNHWDALDQFEGEEYQRTLAAITLDSGEQVDAFVYALNAIP
>NZ_CP048629.1|WP_150299096.1|3667809_3668238_+|universal-stress-protein
MYNKILLAIDLNHKASWQKALPVALELCRAHEASLFIVTVLPDFGLPLVGGFFPKDFAAKAKKAFSDNLREFVKEMIPKDVKVQRVVADGKPYEAILRVAKKQEVDLIVMSSHKRKRLEDYVLGTNALRVVQQSKRSVMIVR
>NZ_CP048629.1|WP_163983858.1|3665207_3667817_+|TRAP-transporter-permease
MSEQNLQRDDTDTELEDMVASSDTGARKPGGATGKLLVCVAAAWSLFQLWIASPLPYMVGFGVFNSAEARSIHLAFAVFLGFMAFPALKRSPRNYVPILDWVLALVASFCAAYLFIFYSELASRPGSPTTTDVVVGVTGLIMLLEATRRALGPPLMIVASIFIIYSLAGPHMPGILAHRGVSLESLTNHQWLTSQGVFGIALGVSTSFVFLFVLFGALLDKAGAGNYFIKVAFSLLGHYRGGPAKAAVVASGMTGLISGSSIANVVTTGTFTIPMMKRVGFSSEKAGAVEVASSVNGQIMPPVMGAAAFLMVEYVGISYVEVIKHAFLPALISYIALVYIVHLEAMKAGMQGLESSNPPRPFVRKVIGFLTGLLLLMALSLAVYYGLGWLKPILGDSAFWVISAILMAVYVGLLKLGSQYPVLELDDPDSPVLKLPQTRPTVMSGLHYILPVIVLIWCLMVERLSPGLSAFWATVFMIIIILTQRPLIALFRGQSALGDDLMHGLSDLWQGLVAGARNMIGIGIATATAGIIVGAVSQTGVGLVLADLVELLSMGNLMLMLILTAVLSLILGMGLPTTANYIVVSALLAPVVVTLGQQNGLIVPLIAVHLFVFFFGIMADVTPPVGLASFAAAAVSGGDPIRTGFQAFYYSLRTAALPFLFIFNTDLLLIDVGLWHGIVIFIVATIAMLIFAAATQGWLVVRNRWYENILLLLVAFTLFRPGFWMDIIHDPYESIPPAELTQALERVDEGSHLRMQIAGLDKLGDPRTFHLLVPVPDGATGEERMDELGLMLMQDGERTLVDMVTYGSLAADLGFDFDQEILEVLAPVDRIAKEWMWIPGLLLFAMIVGLQWSRRKPTDKPRVEATARV
>NZ_CP048629.1|WP_150299094.1|3664169_3665144_+|TAXI-family-TRAP-transporter-solute-binding-subunit
MKRTSLAVLFSAAIACAGITATPAVAQENFVTIGTGGQTGVYYVVGQSVCRLINRNSNEHGIRCNAPSSGGSVANVNAIRGGEMDMGVVQSDVQFKAYKGIENFEDAGAFEKLRAIFALHGEPLTVVARRDANIETVKDLKGKRVNIGNPGSGQRDTMDVVMDALGWTRSDFALASELDAAEQAAALGDNNVDAMVYVAGHPNGSIQEATTTVDSVLVSVSGEEIDELIEERPYYAKATIPGGLYRGNDEDVETFGVRATLVTSADTPEETVYQTVKAVFENFDRFKRLHPAFATLTEEEMIKEGLSVPLHDGAVRYYKERGWM
>NZ_CP048629.1|WP_163983865.1|3679660_3680440_-|dienelactone-hydrolase-family-protein
MRKTLSTLLMATAGLAQAEMVSKPVSYDIDGEPYEGLLVYDDATSEPRPGLLMVPNWMGVTENSAKKAFRAGGSDYVVFVADMYGKDKQPANAEEAGKLAGALRKDRDLMRKRVNTALNVFKSQSEKVGLDTGRIGAIGFCFGGGAVLELARSGTDIGGVVSFHGNLDTPNPKDAESIKTPVLVLHGDEDPSVPQEQVEAFKQEMRAADVDWQLVIYGGAVHSFTNPAANVPGKNEYHPVVAERAFTAMRQFFSETLED
>NZ_CP048629.1|WP_163983866.1|3680621_3681326_+|succinate-dehydrogenase-iron-sulfur-subunit
MQVSIYRYHPEHDNAPAMQQYAVDDAMREGMVLDVLMHLKNQDDSLSFRRSCREGVCGSDGMNINGRNRLACITRVADVIDSNGTLTLRPLTGMPVIRDLVVDQTQFFKQYQKIQPYLINDTPTTGIERLQSPEDRAKLDGLYECILCACCSSACPSYWWNPERYIGPAGLLNAYRFLIDSRDTATEERLKELDDPFSVFRCRVIGNCTDVCPKGLNPMAAIGRIKLMLLKSGT
>NZ_CP048629.1|WP_163983867.1|3681366_3682272_+|decarboxylating-6-phosphogluconate-dehydrogenase
MKLGMIGLGRMGANMAQRLMQGGHEVVGLDAQLAPRQAFEQQGGQSVDSLAALLEQLPTPRVLWMMLPAGIVTQAMIDELLPLLEPGDTLVDGGNSFYQDSVRRAQQYAQHQLNYLDCGTSGGIWGLTEGFCLMIGGERPTVEQLTPVFQALAPSPDRGWAHVGPAGAGHFTKMIHNGIEYGMMQAYAEGFAMLDKKTEFDLDLHQIADLWRDGSVVRSWLLDLTASALEANPTLAGIAPYVSDSGEGRWAAAEAIALDVSAPVITLALLERLRSRESDSYSDKLLAAMRKGFGGHDFTRI
>NZ_CP048629.1|WP_163983868.1|3682969_3684874_-|molecular-chaperone-HtpG
MTVEAHKETLGFQTEVKQLLHLMIHSMYSNKEIFLRELVSNASDASDKLRFEAIANPELLENQPDLRIRISGDEEARTLTIEDNGIGMSRDEVISNLGTIAKSGTAAFMQQLTGDQKKDASLIGQFGVGFYSAFIVADKVEVFTRRAGLDAAEGVRWESAGEGDFTIETIEKPERGSRIVLHLKSDEGEFADGWRLRNVIKKYSDHISLPIELPKQNQGEEKDQPTEVEWETVNRASALWTRPRTDIKDEEYQEFYKHVAHDFENPLTWSHNKVEGKLEYTSLLYVPGRAPFDLYQREAPRGLKLYVQRVFIMDDAEQFLPLYLRFIKGVVDSNDLSLNVSREILQKDPAIDSMKSALTKRVLDMLEKLAKKQPEQYATFWKGFGSVIKEGPAEDFANREKIAGLLRFASTQQSDDSEVVGLDTYIERMQEGQDKIYYLTGERYSQVKNSPHLEIFRKKGIEVLLLTDRIDEWLMSHLTEYKDKQFVDIARGDLDLGKLEGEEDKQAQEEAAKAKADLVQRIKEVLKENVEDVKVSHRLTDSPAVLVVVEDGMGLQMRKILEATGQQAPESKPILEINPAHPLLEKLDSEQDEERFGDLTHILFDQAALAAGESLQDPGTYVRRLNALLVELSK
>NZ_CP048629.1|WP_163983869.1|3685010_3687014_-|polysaccharide-biosynthesis-protein
MIKEKLIGLSYGQKRSLQIVADVLLMWAALWLAFVIRLGPEGWLLPTSAQAWLFLLAPLVSLPVYIRMGMYRAVMRYFGNDALRCIFRAVTTASVGLVVVVVALRMAGVDVFRSRSILFMYWCLSLGMLGGLRLVAREYFTGNWFTAGKELAHDLMQKEQAGKPIAIYGAGEAGNQLLASIKVGRLYKPVAFVDDNPALARRTVSGLPVFSATDIDRLIDSTGAEELFLAIPSATRAHRKQVLANLQQFPLHVRTIPGLCDIASGKVKVDDLQEVDIADLLGRDAVPPEASLFEGCIKGKAVMVTGAGGSIGSELCRQIITSRPTTLVLFEHSEFALYAIHSELDNFLKTCDFEVTLVPILGSIRNSTRLRHVISAWNIKTIYHAAAYKHVPLVEHNVAEGIMNNVFGTLNVAQAAIRCQVENFVLISTDKAVRPTNVMGSTKRMAELVLQGLSAEQAPNLWNADPSVKHLNRTRFSMVRFGNVLGSSGSVIPLFRNQIRLGGPITVTHEKITRYFMTIPEAAQLVIQAGAMGEGGDVFVLDMGEPVNIVDLAKKMIQLSGLSVKDEQNPNGDIEIAFTGLRPGEKLYEELLIGDNPQETAHPKIRKANEALLPWSELLPILNTIRQAVRDDDYDTIRELLLHTVQGYTPSNGIVDLLYEHHRRAVD
>NZ_CP048629.1|WP_163983870.1|3687057_3688074_-|UDP-glucose-4-epimerase-GalE
MSKTILVTGGAGYIGSHTCIKLLDAGFQVLVLDNYSNSSPEATRRVQQIAGKTVAAIRGDINDAPLLDSIFSSNDIHAVIHFAGLKAVGESVAQPLRYYHNNVSGTVVLCDAMQRAGVKNLVFSSSATVYGDPASLPINEAFPTSATNPYGRSKLMIEELLGDLHASDPDWNIALLRYFNPVGAHPSGLIGEDPADIPNNLMPYIAQVAVGRRERLNVFGGDYPTHDGTGVRDYIHVMDLAEGHVRALEWLGKQAGIRAFNLGTGIGYSVLDMLKAFEKACGKTLEYVISDRRPGDVASCYADPQRAASELDWSARLGLEAMCADAWRWQERNPQGYK
>NZ_CP048629.1|WP_163983871.1|3688176_3689571_-|phosphomannomutase-CpsG
MTQLTCFKAYDIRGQLGTELNEDITYRIARAFAKWLKPKRIVLGGDVRETSPQLKAALANGLRDEGVNVLDLGLAGTEEVYFATFHLGVDGGIEVTASHNPIDYNGLKLVREGSRPISADTGLKDIREMAEASHFELVDGRDPSVPDDQRGSYELVDTRADFVEHLMGYIEPEAFTPLKLVVNAGNGAAGPAIDAIEAAFKEKNIPVTFVKICHEPDGTFPNGIPNPILTENRAITSEAVLKHGADMGIAWDGDFDRCFLFDEQGRFIEGYYIVGLLAEAFLKKEPGAAIIHDPRLVWNTIEQVEQNGGRAVQTKAGHAFIKERMRKEDAAYGGEMSAHHYFRNFAYCDSGMIPWLLVAELLCRKGKPMSTLVDERIAAYPSSGEINLTVNDAPAVLKAIEGQYAKDALDVDYTDGVSIRFDQWRFNLRASNTEPVIRLNVESRGDAALMERETQKLLDSIRAL
>NZ_CP048629.1|WP_163983872.1|3689580_3691233_-|glucose-6-phosphate-isomerase
MTEARDKQWDELITHGKSVEKQHLADFFAEDSERFNKMHRQFGPLMYDFSKQRMTTQTLRHLIDLADAHDLQGWIDKLFSGEQVNCSEGRAAMHWALRLPADAKCQVGEDNVTAQVHGQLQQMERIVDQIHAGQWRGATGEVITDVINIGVGGSDLGPLMVTEALNDFTCPTKHRLNVHFASTIDGSQLSQLLRDKKPQSTLFVISSKSFTTIDTLTNAATALQWLQRSFGKRASSSILHCHFIGVSASPNKMTEWGIAEENQLDFWGWVGGRYSLWSAIGLPIALKIGMYGFRQLLSGAHDMDEHFKSAPWQDNLPVLMGMIGVWNTNILDINALSILPYDGRLKQLPLYLEQLEMESNGKSVSREGEPVARSTCPIIWGDVGPNAQHAFYQLLHQGTEAVTCDFIVPVRRYHEAEHHEAAEELAAQHQLSLANCLAQSRLLALGDAALKNAEELPLHMRYRGNQSSSTVLLDELNPYSLGALIALYEHKVFVQSVIWGINPFDQWGVEMGKKIAMSTLAKIRGEDSSLDDTDVSTAGLLRRIKAEWKS
>NZ_CP048629.1|WP_163983873.1|3691242_3692538_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MYIDVYGDTLCALVSAAGLASTGHNVCLHVPEGPAATTLANGGCPYREPGLPELVTEQTIAGRFKLAAGDVPPDERAAIIWLALSPTDVDLAFEIISKLPTESGRSWVVVNQSTFPVGTTEALERALGELPGSESTQRVAASLPDLLIEGAAVKSFTAANHWLLGCDSAWGRRMVAEALRPYNRRRDNIMMMRPREAEFTKLAITGMLATRLSFMNDMANLADMLDVDIERVRQGVGKDQRIGDSYLYPGCGFGGLSFSQDVMNLASTLKHSGIQAQLLDQVMRINERQKESLFRKLWRYYSTDLQGRKVAIWGVAFKPESARIDNAPALKLIEALWAQGVQVHVHDPRALPALAEWAGNRRDLVLHKDPYAALVDVDALMLVTEWDAYMSPDLSHMKATMKQPLLLDGRNIWDPDFMKQNGFEYFGIGRR
>NZ_CP048629.1|WP_150299112.1|3692551_3693445_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MHGVSVKVTKAVLPVAGLGTRFLPASKAIPKEMVTVVDKPVIQYVVEEALAAGINEIVLVTHSSKRAIEDHFDKNYELEAELERRGKHELLEVLKETAPAGLKVSVVRQGSALGLGHAINCARAIIGDAPFAVMLPDVLVQQAGTRTDLGVMAEHFHETGNAQIMVEPVPYDQVSSYGVVDISGVELEAGDGAPMHRVVEKPPRDEAPSNLSIVGRYILPARIFDLLDNTPPGAGGEIQLTDAIATLMEEQGVDAFRIRGRSFDCGSKLGYLEATLAYGLKHPKLGSDFRDLLKQYQ

Crispr_ID: NZ_CP048629_4

• CRISPR_ID: NZ_CP048629_4
• CRISPR_location: 4225644-4225760
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048629_4

Consensus_repeat	Method
TTTCATGGTTGCACGCTTTATGGAGGGCCG	CRISPRCasFinder

spacers of NZ_CP048629_4

>4.1|4225674|57|NZ_CP048629|CRISPRCasFinder
GATCCCATCCCGGCCAAAGCGCTCGCCGGTAACGCCGCTTGTCGAGATAGAACTTGG

CRISPR arrays and Neighbor proteins around NZ_CP048629_4

CRISPR arrays

The CRISPR arrays of NZ_CP048629_4

>merge|NZ_CP048629|4|4225644-4225760|CRISPRCasFinder
TTTCATGGTTGCACGCTTTATGGAGGGCCGGATCCCATCCCGGCCAAAGCGCTCGCCGGTAACGCCGCTTGTCGAGATAGAACTTGGTTTCATGGTTGCTCGCTTTATGGAGGGCCG

>NZ_CP048629|4|4|4225644-4225760|CRISPRCasFinder
TTTCATGGTTGCACGCTTTATGGAGGGCCG	GATCCCATCCCGGCCAAAGCGCTCGCCGGTAACGCCGCTTGTCGAGATAGAACTTGG
TTTCATGGTTGCTCGCTTTATGGAGGGCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048629.1|WP_163984132.1|4211389_4211932_-|hypothetical-protein	unknown	unknown	gnl|CDD|270422
NZ_CP048629.1|WP_163984133.1|4213643_4217492_-|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|236645
NZ_CP048629.1|WP_163984138.1|4224453_4225575_+|methyltransferase	unknown	unknown	gnl|CDD|184963
NZ_CP048629.1|WP_150299550.1|4212286_4213543_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|234571
NZ_CP048629.1|WP_163984131.1|4209439_4211359_+|acyltransferase	unknown	unknown	gnl|CDD|224748
NZ_CP048629.1|WP_163984137.1|4222918_4224355_+|polyphosphate:AMP-phosphotransferase	unknown	unknown	gnl|CDD|274736
NZ_CP048629.1|WP_163984136.1|4220961_4221318_+|PilZ-domain-containing-protein	unknown	unknown	gnl|CDD|377796
NZ_CP048629.1|WP_150299545.1|4221363_4222734_-|DNA-repair-protein-RadA	unknown	unknown	gnl|CDD|236994
NZ_CP048629.1|WP_163984135.1|4219546_4220887_+|NADP-specific-glutamate-dehydrogenase	unknown	unknown	gnl|CDD|181834
NZ_CP048629.1|WP_163984134.1|4217645_4219310_+|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl|CDD|236992

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048629.1|WP_163984132.1|4211389_4211932_-|hypothetical-protein	gnl|CDD|270422	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein. This subfamily includes the periplasmic sensor domain of the histidine kinase receptors (HisK) which are elements of the two-component signal transduction systems commonly found in bacteria and lower eukaryotes. Typically, the two-component system consists of a membrane-spanning histidine kinase sensor and a cytoplasmic response regulator. The two-component systems serve as a stimulus-response coupling mechanism to enable microorganisms to sense and respond to changes in environmental conditions. Extracellular stimuli such as small molecule ligands and ions are detected by the N-terminal periplasmic sensing domain of the sensor kinase receptor, which regulate the catalytic activity of the cytoplasmic kinase domain and promote ATP-dependent autophosphorylation of a conserved histidine residue. The phosphate is then transferred to a conserved aspartate in the response regulator through a phospho-transfer mechanism, and the activity of the response regulator is in turn regulated. The sensor domain belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space through their function as an initial high-affinity binding component. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0.00117777
NZ_CP048629.1|WP_163984133.1|4213643_4217492_-|EAL-domain-containing-protein	gnl|CDD|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.54298e-121
NZ_CP048629.1|WP_163984138.1|4224453_4225575_+|methyltransferase	gnl|CDD|184963	PRK15001, PRK15001, 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG.	1.55433e-90
NZ_CP048629.1|WP_150299550.1|4212286_4213543_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP048629.1|WP_163984131.1|4209439_4211359_+|acyltransferase	gnl|CDD|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	6.11915e-65
NZ_CP048629.1|WP_163984137.1|4222918_4224355_+|polyphosphate:AMP-phosphotransferase	gnl|CDD|274736	TIGR03708, poly_P_AMP_trns, polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP). [Central intermediary metabolism, Phosphorus compounds].	0
NZ_CP048629.1|WP_163984136.1|4220961_4221318_+|PilZ-domain-containing-protein	gnl|CDD|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	4.71372e-10
NZ_CP048629.1|WP_150299545.1|4221363_4222734_-|DNA-repair-protein-RadA	gnl|CDD|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP048629.1|WP_163984135.1|4219546_4220887_+|NADP-specific-glutamate-dehydrogenase	gnl|CDD|181834	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase.	0
NZ_CP048629.1|WP_163984134.1|4217645_4219310_+|energy-dependent-translational-throttle-protein-EttA	gnl|CDD|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0

Protein sequences

>NZ_CP048629.1|WP_163984138.1|4224453_4225575_+|methyltransferase
MQSCETPFGTLQLERYPPTSNPTLQAFDAADQYLLQTLAQNPGTAAAPLVINDNFGALSCALAGQSPHSFTDSHLASVAIHNNLLANQLQPDSVKIIDSQSELDGPYDRVLLRIPKSLALLEDQLIRLRPHLASGAEVIAGAMIKHLPHSAGDLLAKYVGPYQASLAWKKARLLTARFDADLHTETPRLATAYELPETGIQLTNLPGVFARERIDIGTRALLSCIPSEPGPVRIIDLGCGNGAVGIMAALRNPQASLTFIDESHTAIASARINMEAAAPDRSAEFLVADGLVGMPDNSAELILCNPPFHQQQVVGDEIALRLFEQASNVLKPDGALIVVGNRHLGYHVKLKRWFGRVEQISATSKFVVLRASN
>NZ_CP048629.1|WP_163984137.1|4222918_4224355_+|polyphosphate:AMP-phosphotransferase
MTEYAIDKKSFKEQNAALTEALLEAQYELRKSGRGPVLVLISGNDFAGKAEAIYAFYERLDNRFLDTRAFSLPEGLERRMPRLWRYWSSLPPAGQIGFYLGSWYHQPLMLLSSGKLTEEQFAKDMEEIVRFEQVLINEGVAIIKLWLHLTPDEPNRAPPAPELFDETVAMREWGDFSAADYERVRAGAELMSQLTSTAEAPWIRVRSHDPNYRDIFIGQIVLKAMQQTPTGDPPVEYRPATTRHLRQLDYSAKLDKPVYKDELEQQQARLRELVQHPRFAQRALLLVFEGTDAAGKGGAIRRITQCLDPRRFRVFGTSAPTDEERSHPYLWRFWRRLPAPGSIAVFDRSYYGRVLVERVEGFAEPEAWQRAYSEINDFERQLQEANIIVVKFWLAITAEEQLKRFEAREKSPLKRYKLTDEDWRNRKQWPAYEQAVDDMVDQTSTENAPWHLIPAEDKRYARIAVLRTLCDTLETELQ
>NZ_CP048629.1|WP_150299545.1|4221363_4222734_-|DNA-repair-protein-RadA
MAKNKRIYGCTECGATFSKWAGQCGECQAWNTLVETVVDTTPTGGSAGRTSNWAGELAQVKTLAEVSTEEMPRQPSGSSELDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTLCRLAQTMPALYVTGEESQQQVAMRARRLALPEDKLMVMTETCIESIIATARREKPKVMVVDSIQTIFTEQLQSAPGGVAQVRESAALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVLYFEGESDGRLRMLRAVKNRFGAVNELGVFAMTDKGLKEVSNPSAIFLSRYEAPIPGSVVMSTWEGSRPMLVEVQALVDTSHLGNPRRVTLGLDQNRLAMLLAVLHRHGGVPTYDQDVFVNVVGGVKVLETASDLALLAAVMSSLRNRPLPMDLMVFGELGLSGEIRPVPSGQERLKEAAKHGFAKAIVPKANAPKESPEGMEVIAVTRLDEALDAIFD
>NZ_CP048629.1|WP_163984136.1|4220961_4221318_+|PilZ-domain-containing-protein
MSDDRRRFTRVPFDAVTRLQQDDWSTSVQLVDISLRGLLVTQPADWEASRNTEPFVVAIDLDEGSQITMEVRLVHSEEGLLGFRCEHIDLDSVSHLRRLLALNLGDADLLDRELAALL
>NZ_CP048629.1|WP_163984135.1|4219546_4220887_+|NADP-specific-glutamate-dehydrogenase
MTDTLASCLAHLKLRDPGQPEFHQAAEEVLSTLWPFLEANPKYLNSGIIERLIEPERVIIFRVPWVDDRGQVHVNRGYRVQMSSAIGPYKGGLRFHPSVNLGVLKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKTDGEVMRFCQSFMTELSRHIGENLDIPAGDIGVGAREIGYLYGQYKRLRNEFTSVLTGKGMSYGGSLIRPEATGYGCVYFADEMLKRKGDSFEGKRVAISGSGNVAQYAAQKVMELGGKVISVSDSGGTLYFTEGMTQAQWEALMTLKNERRGRLVDFAAATGGEFLAKQKPWQLVCDIALPCATQNELDGAAATQLVENGCFCISEGANMPSTLEAIDVFQQARILFAPGKAANAGGVAVSGLEMSQNAIRTNWSSEEVDSKLKNIMECIHKACEEYGTEADGYIDYVKGANIAGFVKVADAMLAQGVV
>NZ_CP048629.1|WP_163984134.1|4217645_4219310_+|energy-dependent-translational-throttle-protein-EttA
MAQYVYSMHRVGKVVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDTEIDGEARPMPGIKIGYLPQEPELDPSKTVRDIVEEAVGEIKEAQTRLDAVYAAYAEPDADFDALAAEQAKLEAIIQASDGHNLERQLEVAADALRLPPWDAQIEHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDADSVAWLEQFLHDFSGTVVAITHDRYFLDNVAGWILELDRGHGIPFEGNYSQWLESKAARLAQESKQESSHAKAMKAELEWVRQGPKGRQSKSKARLQRFEEMQSQEFQKRSETNEIFIPVGPRLGDKVIELNNVSKSYGERVLIDNLSFSVPKGAIVGVIGGNGAGKSTLFRMITGKEQPDSGNIDIGDTVQIASVDQSRENLDGNLSVWQQVSDGYDIIKVGNHEMPSRGYVGRFNFKGADQQKFVKDLSGGERGRLHMAMTLKQGANVLLLDEPSNDLDVETLRALEEALLDFPGSAIVISHDRWFLDRIATHILAYEDDSQVVFFEGNYTDYEADRRKRLGESATQPHRVRYKKLA
>NZ_CP048629.1|WP_163984133.1|4213643_4217492_-|EAL-domain-containing-protein
MISRPEPADSNPRPAQVSITGRPAAGLALVILAAVLLAALMVWQAWHDFTLVRSQHQTQIEESVWLTAEQVGRNLELKSVAIEQLLATQQDSAAAPPMQLINGLEEVIRVDLSEADAVHPDQPWMRVVHRLALSEQTYTVAADPVTGLLHWIVASRNPGEYWVLLVSEQAIAELVSAYPSRGYTWLLEDTASVRVLARQRTDHLIFLENAQMTREERQRVYVSAPVEGTLWQVRGLVDEGYYRQQLGQLISAKALVVAAFTAVLLLILWVLSQMQRTNRSLEAFNAESYRTLQQAERRYRDIFQNVDMALVQLDLAGLLGFLEQQHLASSEELDVWLKHNPQRHDELMGQIRVIDANQNMLDLLELDSVAALQQAVQHNRKQRIERSGFRYGLVAALVNRQTRFEMETPLRSVGGILRYVWIVMRLPPQIEELNAVTVSIADITERRRIETTMSEREDFWAGVVKAVPDIVYIKDVQHNQVVFANRSLARSLGYSRQEEAAFPADPQQTLLHPDDVEYMQINRNLQQVLPDEKILDWRIRWRRRDGGWNWFALRVKVMSRLPDGRVHQVIGTVKDVTHQTGITESLKTSEQRYRLLAENISDVIWSTDMDFRLDYVSPSVIGVLGFSPEFIITNGFEEVVAGKRFTQFITALVREIRPQLADPAAAERLRHEGFNRHTSFDCIKADGHTCPVELRVSLMWSPYGRFLGLLGIARDITEQRRTENRLRMAATVFENTTGAIVVTDPAGYIVQINENFSRITGYTPDEVLDQLPLLLASDYHKPAFYQELRAELRANGRWEGEIWQKRRNGEDYPTWAGISAVLDSDGDMVSYIGFFVDISERKASEARIESLAYFDALTGLPNRTLFQDRLAGALQVAERRKEWVAVLFLDLDRFKPINDTLGHAAGDTMLKEVGRRLRSCIRESDTVARMGGDEFTMLLIGLQTRDAALKASIHVAEKVLRALAPGFLLQQKEFFISASIGIALYPQDGVETTVLLKNADTAMYHAKEMGKDTFRFYQAEMNARAAERLNLENDLRRALHNDEFTLDYQPQFSCSDRHLTGAEALLRWSHPELGNVSPAVFIPIAEEIGLVSALGDWVLDRACRQMASWHDAGHLLPRLAINLSARQFSAGRLAEQVAEVISRYRLEPGCIELELTESILLQDVEDTMRTLASLKELGVQIAIDDFGTGYSSLKYLKDFPIDTLKIDRSFIHAMYEGSRDASLVQAIVAMGRSLKLRVVAEGVEGPEQLSLLRNFDCDEAQGFNLGRPVPADELLETWLQGT
>NZ_CP048629.1|WP_150299550.1|4212286_4213543_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MFSRSNDIASFDAELWEAMQQEAQRQEEHIELIASENYTSPAVMQAQGSVLTNKYAEGYPGKRYYGGCEYVDVAEQLAIDRAKQLFGADYANVQPHAGSQANSAVFQALLTPGDTVLGMSLAHGGHLTHGASVNFSGKHYNAVQYGINTDTGLIDYDELEALAVEHKPKMIIAGFSAYSQILDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLRGPRGGLILARSNEALEKKLNSAVFPGGQGGPLMHVIAAKAICFKEAMSDEFKTYQQQVVKNAQAMAEVFIGRGFDVISGGTKNHLFLLSLIKQDITGKDADAALGRAFITVNKNAVPNDPRSPFVTSGLRIGTPAVTTRGFKEEDCRQLAGWISDILDAMGDESVIDRVREQVKDICKRLPVYTD
>NZ_CP048629.1|WP_163984132.1|4211389_4211932_-|hypothetical-protein
MRILPAARIWRGLKDGSVDIWPGTLTRSGGEYFTLQTDRSLGLVGIHLYYRPGEPAPVWPEGLHGKRLILMMNHLYTRDLLSIVEDPALDVVIHRSSSHAGSVKMLLRGRGDYLLHYRSQVGPVVSQMGIDPLPSLRIIELPMRFVLSQRSGFAEQLKADLDQAYDELAKQGTELNVTRQ
>NZ_CP048629.1|WP_163984131.1|4209439_4211359_+|acyltransferase
MKTTPTYRTDIEGLRALAVILVILYHYQVPGIAGGFIGVDVFFVISGFVITQLLQRALKKGSFRFSDFYARRIRRLLPLFLLVSSVTFVMISPYYIGDAYYIFAKSWLSSLAGLSNVYYFHELAQYFAPETRSLSLLHTWSLAVEEQFYLIWPPVLYLAYRFGKNRNGLWPFCMALIAALGLSVYLANAYPSAAFYLLPARLFEFMLGTGVALFGHQLPALKRRSAEIFAALGVAMICATALLLTSQDHFPGYNALWPTLGTALVIYAGLHQSGTLTARLLSLPVMVFLGGISYSLYLWHWPPVALMHYQLIELTWSNRLLLMATVLVLSWLSFRYVENRYRHRPWSFRKSFVLFVFVPVLVVWAIQTTIRLADDLSFRIPEERRELYNIIAQNNAGDLYKPCFKGDPADFDTSEACIVGREAANGEPDAILIGDSHALALLGFVEQIVEDRHALLVVTGASTPFVIPEHSIDAFADPEKIQRNSALADYLQRRPMTVFVNAWWNSYLQNGSYQRYFLDTAAWLHAQGHRVIMLEDVPELPSSAYAECLLKNMDDCSIDATQVRQRQARFESFKQAVQHRFPDVTWIDPKKAICNDQRCETVLGGIPLYRDEHHLNHVGSTRLGERYLELFGNPLLEKP

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1728881 : 1736597	10	Thermobifida_phage(16.67%)	NA	NA
DBSCAN-SWA_2	2073001 : 2092010	18	Burkholderia_virus(33.33%)	integrase,transposase	attL 2066301:2066315|attR 2097342:2097356

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP048629|1728881:1736597|DBSCAN-SWA
GTCAGGGCAAGTCACGGTGTCGTATCTGCAGGTTGGGGGTATGCGCGCTCAGCTCCCGTACCAGGCGCTCGGCAATATAGACTGAGCGGTGATGCCCGCCTGTACAGCCAATGCCGACGCTCATATAGCTGCGTTCGCCGGCAGCGTAGCGGGGCAGCCACTTTGCCAGAAAATTGTAGATATCCTGATACATCTCCTGAACGTCCGGTTCCCCTTCCAGGTAATCACAAATTTCCTTGTCCTTGCCGCAAAACGGGCGTAGCTCCGCTTTCCAGTAAGGATTGGGCAGGCAGCGCACATCGAACACCAGGTCGGCATCGACCGGTACGCCACGTTTGAATCCGAACGATTGGATCAGCACGGAGGGGGCGTTGCCCTCGCTGCTGAGTAAACGCTGTTTCAGCAGATCACGCAGTTGGTACAGAGTCAGATGGCTGGTGTCGATCTTGAGATTGGCCAGATCAATGATTGGTTCGAGCAAGCGCAGTTCTGCCGCAATGGCTTCACCCAGCGATTTGCTTTCATCCGTCAGCGGGTGCTTGCGGCGCGTTTCCGAGAAGCGCTTGATAAGCACTTCGTCCGTAGCCGCGAGAAACAGCACGTCACAGCGAATTCCGGTATCGCGGACTCGTTGCAGCAGTTCGGGGAAGCGCTCGAGGTCACTCGCCAGGTTACGCGCATCAATACTGATCGCTACCTTCGGCAGGTGTTGGTCGGTGTCGTTGGCCTGTCTGGCCAGCTCGGGTAGCAGCCCGGCGGGCAGGTTGTCGATGCAGTAGAAACCGTTGTCTTCCAACAGATGCAGTGCGGTACTTTTGCCGGAGCCGGATCGGCCACTGACCACAACCAGGCGCATGGATCTTTAACTCCCTTCGTCGGTGCCGATCATCACTTCATAGAGTGTCTGGGCATCAGGTGATTGTCGCAGGGCTTCTCGCAGCGCTTGCTGGTCGAGCTTTTCAGCAAGCATTTTGAGTATCTGCAGATGTTCTTCGGTCGCTTCCTGAGGCACCAGCAGCACAAAGATGAGATCTACCGGTTCGCCATCCAGGGCGTCGAAATCAATCTTGCTGTCGAGCTGTAAAAGTGAGCCTATCGCCTGGGTACACCCAGGCATGCGGCAATGAGGGATGGCAATGCCATGTCCGAATCCGGTCGAGCCGAGTTTCTCCCGGGCAACCAGGCTTTCGAAAATCGCGTCGGGATCCAGGTTGGTGTGCTGAGAGATCAATTTGCCGATCAGCTCCAGCACACGTTTCTTGGATGCCCCCTGCACACCTGCAAAGGTGCGCTCGGGGGTCAGGATATGGTCTATTTGCATGGTCACGCGGCGTTGATGGCCTTAGCGGTCGTTGGCGCCCTGTAGGCGGTTGAGGTTCTTTTCCTTGTATTTGATCAGCTGGCGATCAAGCTTGTCGATCAGCATGTCAATTGCCGCATACATATCAGTGTGTTCTGCGTTTGCGACGACTTCCCCCCCGGAGACATGGAGAATGGCTTCGGCTTTCTGACGCAGCTTTTCAACTTCAAGGATGACCTGGACGTTGGTGATCTTGTCGAAATGCCGCTCGATGCGTGCCATTTTTTCAGTGACGTAATCACGCAATCCGTCAGTGAGCTCGAGTTGGTGACCGCTGATATTGAGTTGCATACGGCTTCTCCTGATTGGCTTTATGTTACTGGGTGAACCCGATCACCCGGTGGTGCCACCTTGATTCCTTGTACTGTCAAACCAGTCGCTTGCGTTCGCTCGATGGAGCGATGTTGAGTGATTCCCGATACTTGGCAATAGTTCGGCGGGCTACGTGAATGCCCTGTTCCTCCAGTAAACCAGCGATCTTGCTGTCGCTCAATGGTTTCTTCGGGTTTTCAGCCGCAACCAGTTTTCTGATCAAGGCGCGGATGGCGGTTGAGGAGAATTCACCGCCCTCACTGGTGCTTACGTGGCTCGAGAAAAAGTACTTGAGTTCGAAGATTCCGCGCGGGGTGTGCATGAATTTCTGTGTGGTGACGCGGGAAATGGTCGATTCATGCATGCCGACTGCTTCGGCAATATCATGCAACACGAGTGGCTTCATCGCCTCTTCGCCGTGCTCGAGAAAACCGCGCTGGTGCTCGACAATTTGCGTAGCGACTTTCATCAGCGTCTCGTTGCGGCTCTGTAGGCTCTTGATGAACCAGCGCGCTTCCTGCAGATGATTGCGCAGGTAGGTATTGTCGTTGCTGGTATCGGCGCGGCGTACCATGGAGGCGTAGGTATTGTTGACCCGCACCTTGGGTACCGATTCCTGGTTCAGCTCGACCACCCAGCGATTGCTGTCACGGCGGACAATCACATCCGGAATCACGTATTCGGCATCGCCGGAGGCAATCTCCGAGCCGGGCCTGGGGTTCAGCGTCTGGATCAGGGCAATGGCATCGCGCAGCTGGTCTTCCTTGAGCTTGGAACGCCGCATCAGCTGGGAGAAGTCGCGGTTTCCGAGCAGCTCCAGATGGTTGTCGACTACCCGTCGGGCCTGCTCGAGCATCGGTGTATCCGCTGGTAGCTGGCGTAGTTGCAGCAGCAGGCATTCACGCAGATCCCGGGCGGCCACGCCCACCGGCTCGAACTGCTGGAGCCTGTGCAGAACCATTTCGACTTCGTCGAGATCCGCTTCCAGCTCCGGGTCAAGGGAGGAGAGAATGTCTTCCAGTGACTCCTGCAGATAGCCGTCGGCGTTGATCCCATCGATCAGCGCTACGGCGATCTGGTAATCCGTTTCGGACATCGGAACCAGGTTCAGCTGCCATTCAAGATGGCTCTGCAGGGTTTCGCCGGTGCCGGTGCGCGATGTGAAGTCCCAGTCTTCGTCATCGTTGCTGGGCAACGAGCTAGCCGAGGTCTGGTAGACGTCTTCCCACTGAGTGTCGACCGGCAGTTCGTTGGGTATCTGCTCATTCCAGCTGCCTTCTTCCTGCGCCTGGCCGTGTTGTTCGATGGCATCAAGGGCGACGGGTTCGGGCATGGTGACCGCCGGGGCGTCATCGTTATCGGATGCGTTGTTGCCGGCATCGCCAGAAAAATCGTCATCGCCATCATCCGCCATTTCAAGCAACGGATTGGCTTCGAGCGCCTCCTGAACCTCCTGTTGTAGATCCAGGCTGGAAAGTTGAAGCAAACGGATGGCCTGCTGCAGCTGGGGCGTCATGGTCAGCTGCTGCCCCATCTTGAGGACGAGCGTTGGTTTCATTTTCCGTTGAACTACCTTGTGCGCTGAATCAGAACCGTGGGAGCGCCGCGTGGCGCTTTGCCTTTAAGATCATGCCTGAAGCCAAGCGGCTTTTATAGACGGAAGGCGTGACCGAGGTAGACGTCCCTCACCAATTGATTGGATAACACGGTTTCCGCGTCTCCTTCGGCAATGATGTGTCCGTCATTTACAATGTAAGCCTTGTCGCAAATATCCAGGGTTTCGCGCACGTTGTGATCGGTAATGAGTACGCCGATGTCCTTGTCCTTGAGATGCTGGATAATCTGCTTGATGTCATTGACCGATATGGGGTCCACGCCGGCAAAAGGCTCGTCGAGCAAGATGAAGCGGGGCTCAGTGGCCAACGCGCGGGCGATTTCTGCTCGTCTGCGCTCACCGCCGGACAGGCTCATGCCCTTGCTGTCTTTCAGGTGATGGATATGGAATTCGCGCAGCAGGGATTCGAGTTTGCCCTCGCGGCCCTTGCGATTAAGGTCCTTGCGGGTCTCGAGAATTGCCATGATGTTCTCGCCAACAGTCAGCTTGCGGAAGATTGACGCTTCCTGCGGCAGATAACCAATGCCCTGACGGGCGCGGCCATGCATGGGCAGACCGGTCACATCCACGCCGTTGATCTGGATCTTGCCCTCATCGGCTTTGACCAGCCCCACGATCATGTAGAAACAGGTCGTTTTGCCTGCGCCGTTAGGCCCCAGCAGACCCACGACTTCGCCGCTGGTAATCGACAGGGAGACATCCCGCACCACTTTGCGCGATTTGTAGGCTTTGGCCAGATGGTGCGCCTGTAGCTTAATCATTGCTGGCCGGCTCCGGCTCGGGCGTACGATTGCGCGGCTGGATCACCATCTCGATGCGGCCGGGCTGTTCGGCGTTTTCGCCGGGGCGCCCGGCATCAACGACTTCCTCCGCAACGTTATAGGTGACGTACTCGCCTTCAAATGTGTTGCCGTCCTGGTCCAGGTGGGCATTGGTGATCAGGACCACCCGTTCCTCGGCCGCATAGTATTCAATGGTCCGCCCGCGTGCATTGACCGGGCCCTTGCCCGGGTTTGGCGTCTGCCTGAATGTCGCGGGGTTGCCCACGCTGACGATCTTGCGGACTTCGCCCTCGGCGTCAGTGGTCAGCGTCACTTCGTTACCCGTCAGGCGCATGCTGCCCTGGGTCACGATGACGTCACCGGTATACACAGCGATGTTTCGCCGGTCATCGAGGTTGGCCGTATTGGCTTGAATGCGGATGGGCTGGCTGCTGTCTTCAGGAAGGGCGATTGCCTGAAAACAGGGGCCGAGCAACAGGGCAACAAGCGCCAGGGATTTAACGCACCTCATGTAGGCCTCGTACGTTGGACAGCAGCTGCATGCGGCCGTCTTGGAAATAGACATGCATGCCAGTGGCGGTAGTGACGCCGCTGGCTGCTTCGATTCTAACGTCCTGATCGGTCTCGGCGTAATCCCTCGCGGGAAATACCGTCAGCGCCGACGTGGTCATTTGCGATACCGGCTCATCGGGTATTTCCTGCTTGAGCAAGACATCATCGTTCAGCTGCACCCGGTCACCGCCTTCGGTGATCCACCCGGTTTGCGATGTCACTAACCAGGGCTGTTGTTCGTCTGCACGGAAATACAGCAGATTCGGCGCTTCCAGTCGGGTGCTGTCCTCGGTGGCAAGGTGCGTAGCGCGCCGGCTGGTCAGCTCATAGCGCACTGTGCCATCGGGATTGAGCATAGTGATCTGGCTGTTTTCCATGAAGAAATCAGGCTGCGTCGGATCATCCACCAGCACCGTTTCAGTGAAGCTGCCGGGTCGGATGTTCCAGTAGCCCATCGCCAATGCGATCGCCAGCGCCAGGCCGACGATGGCACCCACTACCAGGTAGCGAGGCGGATTGAAACTCACAGGTAAGCAGCCTGCGCGGCGTCAAGCGTGCCCTGGGCGCGCATGATCAGTTCGCAGAATTCGCGTGCAGCGCCCATCCCGCCAGCATTGTGCGTTACGCCGTGGGCATGCTCGCGCACAAAGGGGTCAGCGCTGGCAACGGCCATACCCAGCCCGACCTGACGCATGACCGGCAGATCCGGGAGGTCGTCCCCAAGGAACGCGATCTGTTGATCCTTGAAATTGACCCGCTGGCGAAGCTCCTCCAGCGCGTTGAGTTTGTCTTCGCGGCCCTGAATCAGGTGTTGGATGCCCAGGTTGGCGGCGCGCTTTTCGACCAGGGGAGAGTTGCGTCCGCTGATGATTGCGGTCTCGACACCCGAAGCGATGAGCATCTTGATGCCGTGACCGTCCAGCGTGTTGAAGGACTTGAACTCGGTGCCGTCCGGCATGAAATAGAGCCGTCCGTCAGTCAGTACGCCGTCGACATCAAAGATCGCCAGGCGTATGGCCTGGGCCCGTTCAAACAGGTGCATTTCATTGGACTGGTTCATACTACTCCTGCGCGTAACAAGTCATGCATGTTCAGGGCGCCAACCGGTTTGCCGGCGTCGTCGACCACGAACAGGCCGTTTATCTTGGCGTCCTCCATTACCTTCAACGCCTCGGCAGCCAGCGCACCCTGCGTCACGGTTTTGGCCCGTGGGGTCATGACGCTGGCGATGCTGGCGCTATGGATGTCGACGCTGTGATCGAGTGTGCGACGCAGATCGCCGTCGGTGAATATGCCAATCAGCGAACCACTTTCGTCTGCAACGCCGGTCAGGCCGAGCCCTTTGCGGGTCATTTCCAGGAGCGCATCGCGCAGGCGTGTCTCGGGCGTGACCATCGGCATACGCTCGCCAGCGTGCATGATGTCATCGACCAGGAGCAACAGGCGTCGCCCGAGTGCGCCGCCGGGATGTGAAAAAGCGAAATCCTCTGCACTGAAGCCGCGGGCCTCCAGCATGGCAATAGCCAGGGCATCGCCCATTACCAGCGCAGTGGTGGTGCTTGAGGTGGGAGCCAGATTCAGCGGGCAGGCCTCCATCTCCACACCGGTGTGCAGGTTGGCCACGGCGGCCCGTGCCAGCGTGGAATCCGGATTTCCGGTAATGCTGATCATCGGCACGCCAAGGCGCTTGATCAGTGGCAACAGGGTGACCAGTTCGGCGGTGTTGCCTGAATTCGACAGGGCGATGACTACATCCTCGCGGGTGATCATGCCCATATCGCCATGGCTGGCTTCGCCGGGATGCACGAAGAAAGCCGGCGAGCCGGTACTGGCAAGGGTCGCGGCCATCTTGCGCCCGATGTGGCCGGATTTGCCCATACCTGTGACGACTATGCGCGCCTTGCAGTCCAACAGGGTCTGACAGGCGCGGCTAAAGTGCTGGTCCAGTCTGGCCAGCAGGCTGTCAACGGCGTCGCGCTCCATGCTGATGGTGCGCTGTGCTGAGGCGATGAAATCGAATTCGGACATGGGATATGCGTCTTGGTGTGGTCAGGCCGCGAGTATAACGTCTTGTTTCGCCCAACTCACCCCGGGTCGAAGCCGGTTTTCGGGTAGCGCTGCATTATCCGGCGCGCAACGAACAACTACGCCGCTATCGCCGGAAATCAAACGTCAATCGGCTCTGATTTCGCGCAGCTTGGGGCGAGCCGGTTGAACTGGTATATTAGCGCGTTCATTTTTGCCGCAGCTTCGCGGCACCCAAGGATCAGGTTTGTTCATATGGCCGTATCGCCGGACTACATCGTTGATATGCAAAAGGTTTCCTTCTCGCGAGGAGAACGCCTGATCTTTGATAACGTCGACATTCGTATTCCCCGGGGCAAAGTCACCGGGATTATGGGGCCATCCGGTTGCGGCAAGACCACGCTGTTGCGCCTGATCGGTGCCCAGCTACGTCCGGACAGTGGTTCCATCATGGTCAATGATCAGGATATCCCCAGGTTGGGCCGCAGCGAGCTGTTCGAGGCGCGCCAGCAGATGGGCATGTTGTTTCAGAGTGGCGCGCTGTTTACCGATCTCAGCGTATTCGAGAATGTCGCCTTCCCGCTGCGCGTTCATACCGATCTGCCGGAAGAAATGGTGCGCGATATCGTCTTGCTCAAGCTTCAGGCGGTAGGGCTGCGTGGCGCTTATCAGCTGATGCCTGACGAGTTGTCCGGCGGCATGCAGCGCCGCGTCGCATTGGCTCGGGCTATCGCGCTGGACCCTCAGTTGATGATGTACGACGAGCCATTCGTAGGGCAGGACCCGATTTCGATGGGCGTATTGGTCCGTCTGATCAGGCTGTTGAATGATGCGTTGGGGCTCTCGAGCATTGTCGTTTCGCATGATCTGGCCGAGACCGCCGGCATCGCCGACTATTTATATGTGGTGGGCGATGGTCAGGTGCTTGGGCACGGCAAGCCCGAGGATCTGATGAACTCGGATAATCCACGTATCCGCCAGTTCATGCAGGGCGAGCCGGACGGTCCGGTCCCCTTCCATTATCCGGCGAATGGCTACGTCGATGATCTATTGGGCAGGGAGAGCCGATGA

Protein sequences of DBSCAN-SWA_1

>NZ_CP048629|1728881:1736597|1734557_1735529_-|WP_163982544.1|DBSCAN-SWA
MSEFDFIASAQRTISMERDAVDSLLARLDQHFSRACQTLLDCKARIVVTGMGKSGHIGRKMAATLASTGSPAFFVHPGEASHGDMGMITREDVVIALSNSGNTAELVTLLPLIKRLGVPMISITGNPDSTLARAAVANLHTGVEMEACPLNLAPTSSTTTALVMGDALAIAMLEARGFSAEDFAFSHPGGALGRRLLLLVDDIMHAGERMPMVTPETRLRDALLEMTRKGLGLTGVADESGSLIGIFTDGDLRRTLDHSVDIHSASIASVMTPRAKTVTQGALAAEALKVMEDAKINGLFVVDDAGKPVGALNMHDLLRAGVV
>NZ_CP048629|1728881:1736597|1734024_1734543_-|WP_150301921.1|DBSCAN-SWA
MHLFERAQAIRLAIFDVDGVLTDGRLYFMPDGTEFKSFNTLDGHGIKMLIASGVETAIISGRNSPLVEKRAANLGIQHLIQGREDKLNALEELRQRVNFKDQQIAFLGDDLPDLPVMRQVGLGMAVASADPFVREHAHGVTHNAGGMGAAREFCELIMRAQGTLDAAQAAYL
>NZ_CP048629|1728881:1736597|1735781_1736597_+|WP_163982546.1|DBSCAN-SWA
MAVSPDYIVDMQKVSFSRGERLIFDNVDIRIPRGKVTGIMGPSGCGKTTLLRLIGAQLRPDSGSIMVNDQDIPRLGRSELFEARQQMGMLFQSGALFTDLSVFENVAFPLRVHTDLPEEMVRDIVLLKLQAVGLRGAYQLMPDELSGGMQRRVALARAIALDPQLMMYDEPFVGQDPISMGVLVRLIRLLNDALGLSSIVVSHDLAETAGIADYLYVVGDGQVLGHGKPEDLMNSDNPRIRQFMQGEPDGPVPFHYPANGYVDDLLGRESR
>NZ_CP048629|1728881:1736597|1729742_1730201_-|WP_150301896.1|DBSCAN-SWA
MQIDHILTPERTFAGVQGASKKRVLELIGKLISQHTNLDPDAIFESLVAREKLGSTGFGHGIAIPHCRMPGCTQAIGSLLQLDSKIDFDALDGEPVDLIFVLLVPQEATEEHLQILKMLAEKLDQQALREALRQSPDAQTLYEVMIGTDEGS
>NZ_CP048629|1728881:1736597|1732202_1732928_-|WP_150301893.1|DBSCAN-SWA
MIKLQAHHLAKAYKSRKVVRDVSLSITSGEVVGLLGPNGAGKTTCFYMIVGLVKADEGKIQINGVDVTGLPMHGRARQGIGYLPQEASIFRKLTVGENIMAILETRKDLNRKGREGKLESLLREFHIHHLKDSKGMSLSGGERRRAEIARALATEPRFILLDEPFAGVDPISVNDIKQIIQHLKDKDIGVLITDHNVRETLDICDKAYIVNDGHIIAEGDAETVLSNQLVRDVYLGHAFRL
>NZ_CP048629|1728881:1736597|1728881_1729736_-|WP_150301897.1|DBSCAN-SWA
MRLVVVSGRSGSGKSTALHLLEDNGFYCIDNLPAGLLPELARQANDTDQHLPKVAISIDARNLASDLERFPELLQRVRDTGIRCDVLFLAATDEVLIKRFSETRRKHPLTDESKSLGEAIAAELRLLEPIIDLANLKIDTSHLTLYQLRDLLKQRLLSSEGNAPSVLIQSFGFKRGVPVDADLVFDVRCLPNPYWKAELRPFCGKDKEICDYLEGEPDVQEMYQDIYNFLAKWLPRYAAGERSYMSVGIGCTGGHHRSVYIAERLVRELSAHTPNLQIRHRDLP
>NZ_CP048629|1728881:1736597|1730222_1730531_-|WP_150301895.1|DBSCAN-SWA
MQLNISGHQLELTDGLRDYVTEKMARIERHFDKITNVQVILEVEKLRQKAEAILHVSGGEVVANAEHTDMYAAIDMLIDKLDRQLIKYKEKNLNRLQGANDR
>NZ_CP048629|1728881:1736597|1732920_1733460_-|WP_150301892.1|DBSCAN-SWA
MRCVKSLALVALLLGPCFQAIALPEDSSQPIRIQANTANLDDRRNIAVYTGDVIVTQGSMRLTGNEVTLTTDAEGEVRKIVSVGNPATFRQTPNPGKGPVNARGRTIEYYAAEERVVLITNAHLDQDGNTFEGEYVTYNVAEEVVDAGRPGENAEQPGRIEMVIQPRNRTPEPEPASND
>NZ_CP048629|1728881:1736597|1730607_1732110_-|WP_150301894.1|DBSCAN-SWA
MKPTLVLKMGQQLTMTPQLQQAIRLLQLSSLDLQQEVQEALEANPLLEMADDGDDDFSGDAGNNASDNDDAPAVTMPEPVALDAIEQHGQAQEEGSWNEQIPNELPVDTQWEDVYQTSASSLPSNDDEDWDFTSRTGTGETLQSHLEWQLNLVPMSETDYQIAVALIDGINADGYLQESLEDILSSLDPELEADLDEVEMVLHRLQQFEPVGVAARDLRECLLLQLRQLPADTPMLEQARRVVDNHLELLGNRDFSQLMRRSKLKEDQLRDAIALIQTLNPRPGSEIASGDAEYVIPDVIVRRDSNRWVVELNQESVPKVRVNNTYASMVRRADTSNDNTYLRNHLQEARWFIKSLQSRNETLMKVATQIVEHQRGFLEHGEEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIFELKYFFSSHVSTSEGGEFSSTAIRALIRKLVAAENPKKPLSDSKIAGLLEEQGIHVARRTIAKYRESLNIAPSSERKRLV
>NZ_CP048629|1728881:1736597|1733446_1734028_-|WP_150301891.1|DBSCAN-SWA
MSFNPPRYLVVGAIVGLALAIALAMGYWNIRPGSFTETVLVDDPTQPDFFMENSQITMLNPDGTVRYELTSRRATHLATEDSTRLEAPNLLYFRADEQQPWLVTSQTGWITEGGDRVQLNDDVLLKQEIPDEPVSQMTTSALTVFPARDYAETDQDVRIEAASGVTTATGMHVYFQDGRMQLLSNVRGLHEVR

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150301897.1|1728881_1729736_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.1e-08	29.2
WP_150301896.1|1729742_1730201_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_150301895.1|1730222_1730531_-	ribosome-associated translation inhibitor RaiA	A0A0M7QCF2	Escherichia_phage	4.2e-08	36.4
WP_150301894.1|1730607_1732110_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_150301893.1|1732202_1732928_-	LPS export ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.8e-23	31.4
WP_150301892.1|1732920_1733460_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_150301891.1|1733446_1734028_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_150301921.1|1734024_1734543_-	HAD hydrolase family protein	A0A140XBD6	Dickeya_phage	1.2e-28	49.6
WP_163982544.1|1734557_1735529_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	3.6e-37	32.5
WP_163982546.1|1735781_1736597_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	4.0e-21	31.7

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP048629|2073001:2092010|DBSCAN-SWA
AATGCCACGTTATGCACCAGAGCGAAAAGAAGCCCTGCTGAGAAAGCTGTTGCCCCCGCACAACCTGTCTGTTGCTGAGTTGGCCCGGCAGGAAGGTATCTGCGAGCAGACGCTTTATAATTGGCGCAAACAAGCCAAAGCCGGAGGAGCTGTTGTGCCGGGAGATCAAAAGCTGACTGACAACTGGTCGGCAGAAGCCAAGCTGGCGGTCGTTATTGAAACCGCCGCATTGTCAGAGATTGAGCTGAGTGAGTACTGCCGCAGCAAGGGTCTCTATCCACAACAAGTAAAGGCTTGGAAAGCCGCCTGTCTGGCCGGCCAGCAAAGCGCCAAGACGCAAAGCCAAGCTGATCGTGAGCAGGCCAAGACAGACAAGAAACGCATCCGCCAATTGGAACGTGAACTCAACCGCAAAGAGAAGGCCTTGGCCGAAGCCGCCGCACTGCTGGTGTTGCGAAAAAAGCTGAATGCCTACTGGGGCGACGACAGCGAGGATATATGACCTCGCTGCCAGTCAGGCAGAACTATGTCGAATGGCTCACTGAGGCCATCACCAACGGTGCACGCAAGAAGCCGGCGTGTGGTGAGCTGGGCATCAGTTTGCGCACCTTCCAGCGCTGGACTCAAGAGAACACCATGAAGCCTGACGGCCGTACCACTGCCATACGCCCCGTACCAGCTAATGCGCTCACCAAGGCAGAACGTCAGGCCATTCTGGAGCTGTGCAACAGCGAAGAGTTCGCGCATTTGCCGCCAAGCCAAATTGTGCCGCGACTGGCTGACCAGGGTCGTTATGTCGGCTCTGAAAGCAGCTTTTACCGTGTGCTGCACGCCGCCGATCAGCAGTACCGTCGTGGCCGCAGCCAACCGCCTCGTCGGCATCCTGCGCCCACAACACATGTAGCCACAAAGCCCAACCAGGTCTGGTCCTGGGACATTACCTATCTGCCATCGCCGGTGCGTGGTCAGTATTACTACCTGTATCTGATTGAAGATATTTACAGCCGCAAAGCCGTTGGCTGGGAGGTGCACAGCGCCGAGTCTGGCGAAGAGGCTGCCGCCTTGTTGCAACGCAGCATTCTCAGCGAAAAATGCCTGCGTGAGCCGCTGGTGCTGCATTCTGATAACGGTGCACCCATGAAGTCTGCGACCTTGCTAACCAAAATGTATGACCTTGGCGTCACGCCTTCGCGCGGCAGGCCCCGCGTAAGTAATGACAACGCCTTCTCGGAATCACTGTTCCGAACATTGAAGTACTGCCCTCAATGGCCGCAGAACGGCTTCGCCAGCCTGGATGACGCCCGGGCCTGGGTCAGGGACTTCATGTACTGGTACAACCACGAGCACCGGCATAGCCGGATCCGCTTCGTGACGCCAGCGGAGCGCCATCTGCGCCTGGATGTGGATATCTTGGCAAAGCGTCATTCGCTGTATCAACAGGCACGCTCAGCGCACCCGGAACGATGGTCAAGGAATACGCGAAACTGGGACGCTGTGAGGGAAGTAACACTCAATCCAGAGAAGCAGCAAAACCTGCAAGAAGAACCGCAGCTACAGGCTGCATAAAAGTATGGTCTACGCGACAACTACGTTGACAAACACCGGCATGAGCACATCAACAGTTGTAGAGCTCTGTAATTTCAATAAGATAAAAATCAAATGCTCATAAGTGCGTTCGCACTCCACCCGTCCAATTTCCCTGCGCCTGTCTCCCGTTTTCAGCGGTTAGGCGAGGCTCCCCGGCTCGACCTGTCCTCATCGATTCCATCCAATGTTGCCGAGCGCCTGTTGCCTACCCAGGCAGCCCTCAGGGTGCTCGCTTTTTATGGCATCCCGGAGATATGCGTCGAACTGCGGCACTTAGTGCTGAGCTGCGAGTCTTTCGGTAGAGCCATGACAGAAAAGGCAACGAAATTGCCAATACCGACCTGGGGGGGGAATGCGGGGGCCTGCCCGGCTTCGCAGTGCCTGCCCATGCAGGACAGCGCGACTGGCGAGGAAGTCTGGAAAGGCCGGCTTCCGGTCGGCAGCCAGGGAGGCCCGATGAGCGATGTCTCGCCCCAGACAGGCCGGCAATACATCGTTGTCACCGCTGGCGGCGCACGGACCTCACCCGAGCGAGGGGGCTAGGTTATCGCCTGTGCACTGCCTGACGAGGCCAGGCAGGCAGACTAGGCAACCCTGTGCGTCAGCGAAGTGCGCGACGCAATGAATTTCAAGCCTGCAGCGCTTTAGGAGTCACATATGAAGAATCATGCATTGGTAGTGGGATCGAGTGGCATCATAGGTAGCGCGGTGTCGCGCTTGTTGGCGGAACAAGGCTGGAAGGCCACCGGGCTCGCTCGTCGTCCAAGCGAAGAGCCTGGTGTCGAGCCGCTCAGTGCAGACCTGCTGGATCCGGAAGCGTTGGCCAACGCGTTGCGAAACACCGCGCCTTCGCATCTGTTTCTGACAACCTGGTCTCGCCAGGCAAGCGAAGCCGAGAATATCCGGGTGAATGCGGAAATGGTCCGTAACGTGCTGAATGCGGTTCGGCCATCCGGATCGGTGCGCCATGTTGCCCTGTCGACCGGCCTCAAACATTATCTGGGTCCCTTCGAAGCCTACGGCAAAGGAGCGTTGCCCCAGACGCCGTTTCGAGAAGAGCAGGGACGGCTGGATGTCCCGAACTTCTATTACGCGCAGGAGGATGAACTGTTCGCCGCATCCGCGCGCGATGGTTTTACCTGGAGCGTGCACCGGCCGCATACGGTGACTGGCGTCGCTGTGGGTAACGCGATGAACATGGCAACGACCCTGGCGGTTTACGCCTCCATTTGCCGCTTCACTGGTCGCCCATTCCGATTCCCTGGCTCCGAAGTCCAGTGGAACGGACTTACAGACATGACTGACTCGGCGCAGCTTGCGCGACACATGCTCTGGGCGTCGACCACACCAGACGCCGCTAACGAGGCGTTCAACGTCGTCAACGGTGACGTGTTCCGGTGGAAGTGGATGTGGGCGCGCATTGCTGAATGGTTCGACATCGAGCCGGCCCCGTTCGATGGAACGCCCGCACCGCTTGAACAACAAATGGCCGCTGATGCAGACATCTGGAAGGAAATGTCGAGTCAGTCAGGTCTGGCAGAGTCAGATATCGGGAAACTGATCTCGCCATGGCACACGGACGCCGACCTGGGTCGCCCGATCGAGGTCGTTACAGATATGTCGAAAAGCCGAAAGCTGGGCTTTCTGGATTATCAACCAAGCGATGAAGCGTTTTTCCGGGTGTTCGAGCAATTGCGCGCCAGCAAACTCATCCTCTAGACAGGCTTAAGGTTTGAACCCTGGCGGTGGACCAGATGGCTCACCGCCACAAAACCATTCCCCACGGGACGAGCGGTTAAGTGTGTCGGTCGCCGCCCCGCGGCCGTTTCGTGCGGGAACCTTTAATCGGCCGATTCAGCAAGGATCATTCGTATCAGCGCTTTTTCGTTCTGACGGGCTGTGATTGAACGGATGCCCCGGCTGTCTGGATGCCAAAAGGTAATATTGCCCGATCGCTCTTGTCCGTATACTGTTTATCCATACAGTTAAAAAGCAAAGGCATGCGCGATGAGCGAAGCAGTTATTCTTGCGCCCATCGGGAACTCGACCGTAGAGCTCCCGTTCTTTTCCGCCCGGGTTCCCGCCGGGTTTCCAAGCCCCGCCCTTTTCCCATACGACTCTTTTTATCAGTGTACAAAAATCCTTTAATAAACGCCTAATAAACAACAAGATAAGGATGAAAGGCTCAATCCTATCTTGTTTAACGGCGTTGACAACTGTCAGCCGGTCCACTCCCTTCGCTGATTCCCTCCAAGATTCCACATTCGGCTGCTTCGCGCTCATCCGAGCAACGTCCTCTCAGTGCAACAAGCTGTCTCTCAAGCGCATGTAGAGCAGTTATCTGCGACCGTACATGAGCAATGTGGTCATCGAGCATTATGTTCACTGCCGCACACGGCTGGTGAGGATCGTCCCCATAGCTTTGGAGTTCCCGAATCTCTGCCAGTGACAGGTCCAGAATTCGGCAGCGCCGAATGAAGGCGAGTCGTTTAGCATGCCGCTCGGTATAGATACGGTAACCGTTGTTCTGCCGACATGGCGGTTCAAGCAAGCCTTGCCGCTCATAGAAGCGAATCGTCTGGGTGTCGAGACCCATTGCTTCTGCTAGCTGACCAATACGCATCGCGCTTACTCCAATCTCAACTGAGAATCCCACTCCCTTGACCTTATAGTTACTATATGGTTTTAACTATCCCAATTCTATTTCTGGTCCAATTGGAGCCGTACCGTGAGAAAAGACTGTGGTGACTCATGTGGCTGTGATGCGACGCCTGCAACTGACCCCGATGGGCCGGTATCCGGCAATGCGTCAGATGCCTCAGTTAGTGTCTTTGCCGTGCCGAAGATGGACTGTCCATCGGAAGAACGAATGATCCGCTTGGCGCTGAATAGCTTTAGCAATATTCGAGCACTCTCTTTTGATTTATCAAATCGACGGCTGAAGGTGGTGCATGACGGGGAGGTTGAGCCCATAACGGCAAAACTGGCGACCCTAGGGCTGGGCGCATCTCTTCAAGAGACAAGCATTGCGGACCCAGGGACGATCACAGCGGCTATAAACTCTGCAACTTCCGACGCTCAAGAGTCCGGCACTCTACGCTGGTTGCTCGGCATCAATGCGATCATGTTCGTAGCTGAAATGACCGCAGGCTTGATCGCCCAGTCTGCTGGGCTGATTGCTGACTCGCTGGACATGTTTGCCGACGCAGCCGTCTATGGTCTTGCCCTCTATGCCGTAGGCCGCAGTTTGCGGTTGCAAACACGCGCCGCTCATGTTGCTGGCGTGCTCCAACTGCTCTTGGCCCTTGGTGTGCTGATAGAGGTGGTGCGCCGCTTCCTGGTTGGCAGTGAACCAGAATCGCTGGTCATGATGACCGTCGCCTTCGTTGCGTTAATCGCGAACACCGCCTGCCTGCTGCTGATATCCAAGCATCGTGAGGGCGGCGTGCATATGAAGGCCAGCTGGATATTTTCAGCCAATGACGTGCTGATCAACCTGGGCGTCATCGTCGCAGGTGCCCTGGTCGCCTGGACGGGCTCCAGCTACCCGGATCTGGTTATTGGCACGCTTGTGGGACTCATCGTCCTCAACGGTGCCCGGCGTATTCTGATGCTCAAGGGATGATGTAGCCCGCTGTCTTGATTGGAAAGGCGGCACAATTGATGCGCTAAGCTAACGTTTCAGCTTGTGGATAATCAAGACGTCGGAGCCAGCAAGACGTTGCGCCTCGGGGTCGTCGAGAAGGATGGTTATGGATAGCTTATGGCTGGTACTTGGCCTGGCTCTGCTTCCCGCATTAGGGAACTTCAGTGGTGGACTTGCGGCTGAAGCTTCGCAAACTACCTCCCGTCGTCTCAATTACTCCCTCCATGCCGCTGCCGGTCTCGTCATGGCAGTCGTGGCGGTTGAGATTATGCCTAGAGTGCTAGAGGGTCTCTCAGCCTGGCTGATTGCCCTTTCCTTCGCTCTAGGCGGCATGGCTTATATAGGCATCGAGAAACTTATAGGGAGCATCCAGAGACGACAAAGCGGTCAGGGCGAGAGCGGCCAATCGAGTGTTTGGATGATCTATATTGCCGTCTCCATAGATCTCTTTAGCGATGGCCTCCTGATCGGGGCCGGTTCTGCGGTCGCGCCATCAGTTGCCATGATCTTGGCAGCGGGCCAGGTTCTCGCGGATGTGCCTGAGGGTTTTGCCACCATCGCAAATATGAAAGACAAAGGGATTCCCCGAAAAACGCGCTTGTTACTCTCAGCCTCATTCGCACTTCCCGTGCTCTCAGCCGCTGCCTTATCTTACTTCCTACTCAGGGACCAGCCGGAGAGCTTCAAGCTGGCCGCACTCACCTTCACCGCTGGTCTTCTCACAGTCGCTGCCGTCGAGGAAATGCTATCCGAGGCTCATGAAAGTGGTGAGGACACACACATTTCGATCATGGCCTTTGTGGGAGGATTTGTCCTGTTCGTTCTGGTGTCAGCGGGGCTGGAAGGACTATTGCCGAAGAGCTGACACTTTACGCTGCTATACTGTATAGGCGTACAGTTATCTGATAGGGTTCTGTTGTAGAGCAAGGGTGAGTGGCCAGCGCACCCCTGCCATGCCCCACGGGTTGTGAACATTCCAAGACGGACGGTCGCCCCAGAATCAGGCTGAGTGAGATCTCTTGATGAATCAGGTTTCCCCAAACAGTTTTCCTCAAGGAATCATCGCGAAGGGCCACACAGAGAAGAATTTCCGGTTCCTGGTTCTGTCGGGTAGTGCTTTGGCTCTGATTCAATCTCAGCTTGCCAACTTACCCCCATCCCAGCGGCGAAGCGCAAGTCGGGCACTGTTTTACTTCGAATGTTTCCTATGGCTAATCAAACATCCCCCTATCACAAGCATTCTGGACTTCCGAAAAAACGCCTTCCTGAGCAGTCAGCGCCTTTTCTACGGGGCGCTCTACTCGACCTGTTTTCTGGCTGCTGAAGTAAAGTACTCAGGCAGACAGAGACTTGTCCTGTACTTCTTTAAACTCCTCGCTGGGTTGTCTAAATCGGCTCCTATCAAGATTTTTGTACATTCAGACCTTACGAATAGCCAGGTCCGGGAGTGCGTCACTCAATTTGAATCTATTCGGATTGACCCTGTGCGCGTCGCCAAGCTCACGGGGTGGCATGTCGCGGACAGAAACGCGGGCTCATTTCGATTAAAGATGGGAGCTGTCTTCGACGTTCTGGGGCCTGATTTTACTAGGGACCTACACCAGGAGAGCCAGAAGCACGCTTTGGCCCATGGTCACTATGGTAACTACGTTAATGTGGTCTCTCGATTCGATGATTTCGTGTGCTGCTATGACGATGATCCGATAGACAGACAACCCTTAAGCCCTGAAGTGCTCCAAGACCCAATCTTTGTTTATAAGCTTTTCTGGAGCTTTCAGCGCTGGCATTTTGAAGGATACTCCGAGCGGAGCCAGACCCAACCGACGGAACGGGTGTTGGCAAACCTTCAGCGCCAATGGATCAGAATCATCTGTTGGGCAAAGTCTGTTCTGGTTAGAGGCGGGCTTATGTGCTCCCCACTCGGTGAGGTGTGGCCCGAAGGGAGCAAGAAGCTCACTCGATCCCTCCATGAAGTAGGCCACCACCGCTATGCTGATGGTAAAGCCCTTGTATCCCAAAAGCTCTTGACCCAGATTCCGCTGTCGGCCACTGACAAGGAGGCAACGGAGCTTCTATTCAAGCGGATCAAAGGCGACTTCAACCAAGTCGTTCAATGGGCTCGACGACAGATTGATCGCATCGCTCATCGTCTGAACGCTATCGATCAAGCCTGTGATCAAGGCGACCTGATAACGCTAGGCTCTCGAATATCTTCTCGGGCATACGGCCAGCCTGGGATGGCGATGAACAGCCTTATCAGGACCGTAAAGGAAACCCACAACGGATTTACAATCATCGACCATGCCATGCGCGGCCACTTGGTGAGCGCAACGGGGTCTTCTTTTTCAACAGCGGAGTTAGCCGCGAATCTGGCAATGCCGACGAAGTATGCGATTGCTCCCATCGCTATTTGGCTGGTGGCGCAGCATCCCGTGCTGACCGATGCGTCTCTGTTGGCATGTGAACTATTCGACCGAAATGGTAAGCGAACCGGTTTTGTCCGGACCGACTCAGGGTCTGTGCTTGTAGTGAAGAAAAATCGGAAGGGGAAGCAACAGGAGGTTGCACTGAGCGGCGACGCAGCCTCTGTGATTGAACTTCTTATCCAGATCACAGCCCCTGTCAGGAGCTATCTCAAGGAGAAAGGGGATGATGCCTGGCGACGATTGTTCATTGTCGCGGGCGGTCAGGGTTTTCAGGAACCCTATACCTTCACAAGCCAGACCAGCTTCGCCAAGACCCTCCGACAAAAAGCCTTTGTACAAGCTCATAGCGCCGAGTTAGGGGACCTGGTCACCGTATTGTCGCTGGCCCGGATAAGGGCTACCGCAGGTGTTCTCGTCTACCTCAAGTCGCTGAGCATCGAGAAAATGGCAGAGTCGCTATGAATCACACCGGGTTTCGTGGAGGCCTCAACTCTTGAGAGAATGAGGCATGACAAAATCCAACAGCTACTCCCCTGAAGTCCGTGAACGTGCTGTGCGCATGGTTCTGGAGAACTTGAAGGACTACCCCTCCGAGTGGGCAGCCATCGAATCCATTGCACCCAAGATTGGTTGTGTCCCGCAGACGCTGCATGGCTGGGTGCGCAAACACCAGACCGACAACGGCCAGCGACCCGGTCAGACGACTGAGGAACGGGACCGTATCAAGGCTTTGGAGCGCGAGAATCGTGAGCTGCGTAAAGCGAACGAGATCCTCCGCCTGGCCAGTGCTTATTTTGCCCAGGCGGAGCTCGACCGCCGCAACAAACCCTGAACGCCTTCGTTGACGAGTACCGTGACCGTTACGGGGTCGAGTCGATCTGCCGCGTGGTGCAGATCGCTCCGTCCGGTTACTACCTGCATGCAGCACGTGCCCGACAGCCTGAACGGCGAAGCACTCGCGCCCAACAGGATGAGTTGCTGTGTGAGGACATCAAGCGTGTATGGGAGGACAACATGCGCTGCTATGGCGTCGTGAAGGTCTGGAAGCAACTCAGGCGCGACAAGGTGCACGTTGCCCGTTGTACCGTTGCGCGACTGATGCGCCACTTGGGGTTGCAGGGTGTTCGGCGCGGCCAGGTAGTTCGTACCACGGTGCCTGATGGCAACGCCGTCTGTCCTCTCGACAAGGTTCAACGCCAGTTCAAAGCTGACCGTCCCAATCAGTTATGGGTTTCAGACTTTACATACGTATCAACGTGGCAGGGTTGGCTCTACGTAGCCTTCGTTATCGATGTCTTTGCGCGACGTATCGTCGGCTGGCGTGTGAGCAACAGCATGAAAACGGACTTCGTGCTTGATGCCCTGGAGCAAGCACTCTACGCCCGGCAGCCAGGCCACACGGACGGTCTGATCCACCATAGCGATAGGGGTAGTCAGTACGTCTCTATTCGTTATACGGAGCGTCTCGCTGAGGCTGGAATAGAGCCCTCTGTTGGTAGCAAAGGAGACAGCTACGACAACGCCTTGGCGGAAACCATCAATGGCTTGTACAAAGCGGAACTGATTTACCGGCAGTCTTGGAGGAGCCGCGAAGCCGTCGAAATCGCCACCTTGAAGTGGGTTCACTGGTACAACTACCAGCGGTTACTGAGCTCGATTGGATATATACCGCCGGCAGAAGCTGAGGCAAACTTCTATCAGCAAAACACCGGTCAGGCCATGGCCGCCTGACTTAAACGAAATGGCCTCCATAAAACCCGGTGTGATTCACTAGGCAACTCCAAACGGGTTGCCATGAACCATTATCTGCCGCCTACCATCATGCAGTTTTTCCAGGAGCGTTGGGTCAGGATTTTCCAAAACGCGGTGATTGTCCACGCCATGAAGGACTCTCCTTTTCTGCTCGATGCGACGGACTTTAACAGCATGAGTGAGTTGGACCGGTTTCTTGAGGCACATGCCCTTCGACCGCTTCCTGAAGAACCTGACCCGCTGAGCAGTTCCGCTGAGCAAATCTTCGATTTATCAGATTCAGAGATCGTCATCTCTATCGATGAGGGTGTTCTTGGAGTGCTTCTCTCGCTAAAGCTGGCCGTTGAGAAAGCTGGCCCGCGTGCGGGAGAAACTGCTGTGTACTGGAGCGAGTTCGCAGCCAAGGTTGAGTCTCATATCGAATCTGATGATTTTGCAGACCCATACATTCGCAGCTGTCTAGTAAAAGCCAGGGGAGTAGCGAACCCTCAACAATTTGAGGGTCTAGTTTGTGGATGATAGCAACGCACTACCTCGCGAATTGGATTTCATAACACACTCTGTCGACGCGGGCTCAGGCCTATTCCGCAGCGCCGAGTGGCTCAATTCGAAGTTTGATGACCCAATGTGGAGCGCTCGCATTGCCCAAAATGGCAAGAGAGACACTGTCATTGATTTCCGGGTTAGGCTGGATGATGGGCTGCTGCTCACCCACTCAAAGCATCAGGGCCTCCTGCAAAGCATCAAGGCATACCTATGCCTCTCATCCCATCCGCTGGCCGCCGGAGGCATCCAGCTTGCCCCGAGGACAGTAGAACATAGAGTCCGTACGACCATAGGTATTGTCGACTACTTCCTCCTACGGGCCGAACGTTTCCAACTGGCATCCTATGGGTTCAAGCTAATTACGCCGCATGACGTAACGGAGTTCATGGCTGTGTTGGCCGCTGGCCAGTACGCGAAGAACAATCTCTACGCTGCGCGTGAAGAGCTTCGGGATTTCCTTCGGCTCAAAAGCCTTCAGGTTACGGAACGGGAAGCAAAGAGCGTTCTCTCTAAGGTTCCCAGCATCGCTATTGTTGATGATACAGATGAGAGCAGCCTTGGCTTATCGGAGTCGGAGATTATTGCGGCCCGGGTTTTCCTCTGGATCAACGGGAACTACAAACGCGTACCGATTACAGCGGGTAGTGACGGGCATTCATTTTTTAGTCATCAGGTTTCTCCGAGCAGTATCTACTCTGAGATATACCGCGAGCGGACTTTAGTGACGCCCAAATTTCTGGGTCTGGTGCTGGACGAACTCCACTTTAGTCCATCTGAGAAGACTTTTCGGGAGTACCCAATGGTTTCGTCCATGGTTCTGTATGACGATCCATTGCCCTCTGAGGCCGGAGTTGATCTATACCGGCAAGCGCTTAAACGAATGGAACTCCTCAAGCTCTGTGGGCTGGGCCATATCAGCCACCATTCGCTTTCAGCCTTGGATAACAGGGTTTTCCTCAGCCAACTGAAGATGAAAGGAAAAGGACGATATCGGTCATTGCCCCAGGAAGTTATTTTTTCGTCGTTCCGGAACGCAGTGGAGTTCTACCTCGGTCTGGGACAACCCCTCATCGACGGTTATCTTGCACTGGCGCGAGAGGCCGATGCTCGTGGATGTACGGTCGGAGATTTGAGCCGATCTGAAACCAGAGAGCTTATCCCCAAGAGGTTAAGGGACATCGGAGTAAGAATCTGGGACCTCTCGGCAGATTTTCGCGGGTCCAATCGTGGAGGCGGCAGTGCTCTGTTTTTTAAGCGGTTCAGAGCGAACGAGGGGCTGCTCCAGCTCGCTGAGGTGCTTTATGGTGCCATCTGGATAATCCTCGCCGCGCTCAGCGCCAGGCGCTCTGGAGAGCTTAGGGATCTTGCGGCAGATAGCTGCCTTGTTACGAAGTCCCATGGCTATTACTTGCAGTTTGACTTACGAAAACGGAACTTCGGCAAGACTCGTGAACAGGCTCTTCGTCCCATTCCCAATGTCGCGGCCCGATGCATTCTGAGCTTGGGTGACCTCCATCAAAAGCTCTCCTTGCTTAGTTCGGCTAAGGCTTCAGATAGGCTTTTCAGCAAGCCTCGGTACCGCGAAGTCGGTCTGGCCGCGATGAGTTCAGTAGACGCGGCAAAAGTGCTGAACCGCTTCTCGGACTATTTCGAAGTGAAACAGGACTCTTATGGACGGCGCTACTACATTCGTACCCATCAAATGAGACGTTTCTTCGCCATGACGTTTTTCTGGGCCGGTGGATTTGGTGGCCTAGACACGCTCAGGTGGTTTTTAGGGCATACCGATGTCGAGCACGTTTATCACTACATCACAGAGACCGTGCCAGGAGAGGTACTGCGGAGAGTCGGTGCCGAGTATGCCTCTGAATCGCTGCTCACGGGGCAGAGCGACACAGAGGATCTGGGGAACCTTCTAGGTGAGCGCTACGGATTGTCATCCTTTTCAATCATGCAGTCGGATGAAGTCGCAGACTATATCGAAGACCTGATGATGGAAGGGTTGCTCAAGGTGGAGCCAGTCTTCATCGATACCCCGACAGGAAAACGCCATGAGATCCTCTTTAAGATCACTGGAGAGAATTCGTGAAGGAAGCAACACGTCAGGTATCTGCTCAGCTGGAGATTAGCAAAAGATCTGTTCTTGCTCGTGTTGGGTACCTCGAATCGATTATTCAATCACCCGCCGAGCACCGAGAAAACATGACACTCCTGGCCGCGTTGAAGAGCCAAAGTGGACTTGCAAAATTGTCGGTCAGCGAAGCTTCTATTTCTCCTATGTCGCTCAATACGCTTAAGAACAGAGCGAATGACCTGCTCCCTGGTGGGTTTACAACTATCGATCATCTGAGACGCCAGGCCGTAAAAGCGATTCACGATTCAACCGTAGTCAAGCCTGCATCGTCCTCTGTAAGCAAGCAGGACCTCAAAGATAAGGTCAAGGCCCAGGAAAGGATAATCTCTCAGCTATGGGATGAAATCGCACTGGTAACGAACCTTTTCAGAGAATCGGTAACACTCGCCCAGCAGTTTGCCGAGAAATGCCCTGATCCGGCAGATCTGAGTCTTTTCAAAAAGCGCCGTAGAGAGCTGCTTTCAATGCTCTCTCTAAGCAAGCAGCCTCAGCCTCCCTCACATGAGAATCAGCCCAATGCCGAGGGATGAGAAACTCTATCGCCTAACGAGCGACGCTTTTCGATTGCCTTACGGAATTGATCGGAATAGCCACGTCCTCAGCGTCAAAGCGGATAACATTCCGCTTCTCTGTTGGCCCGATGGCAGACCGTGCACCGAGGCGAACCTATACCTGCTGCACTGTTTTGAGCGTGGGCTTTCCCGCAAGGAAGGCGGTGGCACGCTTACTCAATATGCCAAGCTTCTCTCACACCTCATTCGCTTTTGCTTTAACAACAACTACTCGTTCATAGACCTGACTGATTCTCGCTTTTCGTTGTTCATCAGAACGCTTCAGGGAGAAACGGACCCACGAAAGCCTGGGCAGAGTGTCACCGCCGGAGTAATACTGACCCACCAGCGTCGACTTAAAATTGACCCACCTGAAGCAAAATGGCCGCCTAATCAAATGATCAGAGCGGCGGCCGATGTTGACTCAGGAGAGACTCGTGGAAATTCATGTATTACATGGCCAAGGCAACAGTATTCGCTCCATCGCACAGCAACTGGGAGTGTCGCGCAATACCGTACGACGGTACCTGCGGGACCTGTCTGTTGTAGCTAGCTATCCGGACCGGGGCCCGCGACCAACGAAGCTGGAGCCCTACAAGCCCTATCTGTTAGAGCGAATCGAGGCGGCCAAGCCGCACTGGATACCGGCCACGGTATTGTTTAGCGAGATCCAAAACCGTGGCTACACCGGCGGAATCACCCAGCTCAAGCACTACACTGCCGAGTTCAAAACGGTCGAGCCTGATCCGGTGGTCCGCTTCGAGACGCCGCCAGGCAAACAGATGCAGGTCGATTTCACGACCATCTCTCGCCACCGGCGTACGATTAAAGCCTTCGTTGCCACGCTGGGCTTTAGCCGCGCCACCTACGTCCGATTTTCCGAGCACGAACGTCAGGAGGACTGGCTACGCGGTATCGAAGAGGCGTGCCAGTACTTCGGAGGCGTGCCCCAGGAGATCCTGTTCGACAACGCCAAGACCATCATGATCGAGCGCGATGCCTACGGCGAAGGCCATCATCGTTGGAATGCGCAACTGCTGGCGTCCGCGCGGGATTACGGCTTTATCGCCCGCGCTTGCCGACCTTACCGGGCCCGCACCAAAGGCAAGGTTGAGCGCTTCAATGGCTACCTGAAGAACAGCTTCATCACGCCTCTGGCAGCTACCCTAACCCAGACCGGCCTGCGGCTGGACGTGGCAACGGCCAATGCTCACATAGGCCCATGGCTTGAGCGTGTAGCACATCAACGTATCCACGGCACCACCGGCATCAAGCCCCAGGTATTGCTGGATCAGGAGCGCTTCCAGCTCAGACCTTTGCCACGGCAGGCAAAACGGGGTCCAGAGCAAATGCCAGTCACCGCACGGCCTGTGCCCAGGGAGAGCTTCCAACATCCGCTGAGCACCTATGACCGGCTACTGGAGGCGCATCCATGAATCTGCAACATCAGCGTATCCAACACGCCTGCGCGAACCTAAAGCTCGACACGCTAGCTAGCGAATGGTCAGCCATGGCCGACCGTTGCGCCTCGCAAGAAGACACCTTTGCCGTCTTCCTCGAGCAGCTATTGCGCTTGGAACTGGATGCACGGTCCCTGCGCTCCCGCGAGACCTTACTCAAGTTTGCCGGCTTCCCTGGGCGCAAGCTCTTCGAGGACTATGACTTTAAATTCGCCAGCGGAGCGCCGCGCAAACAGCTGAACGAACTGACAAGCTTGGCCTTCGTGGAGCGAGCAGAGAATGTCGTACTCCTCGGCCCTAGTGGCGTTGGCAAGAGCCATCTCGCCATCAGCCTGGGTCACAAAGCCGTCGCTCAAGGCATCAAGACGCGCTTCATCGCCGCAGCCGATCTGATGCTACAGCTGGCAACAGCCCGCAAACAGGAACGCCTAGAGCAATACTTGAAGCGCAGCGTGCTAGCTCCGCGGCTGCTGATCATCGACGAGATTGGCTATCTGCCGTTTGGCCGCGAAGAAGCCAATCTGTTCTTCAATGTCATCGCCAAGCGGTACGAGCAAGGCAGTGTCATCGTAACCAGTAACCTGCCGTTCTCGCAGTGGTCCCATGCCTTCGCCGATGACACAACGTTGACGGCAGCGTTGTTAGACCGGTTGTTACACCATGCGCATATCGTGCAGATCCGTGGCGAGAGCTACCGCCTGAAGGACAAGAACGCTGCGGGTATCGCGCCGGTCTCGGCCAACAGCCAAGATCTATTAAACAACAATTAATCGCCAAGGGTGGGTCAGTTTTAAACCGACGATATCGCCGATAAGTGGGTCAGATTTGAACCGTCGTTGACAGCAGAGAAAACGCCGAGCAGCTCATGTGGCAAACATAGGCAGAACCTGTCTCGGCTTTTTGGGGTACGTTGGAGAGCTTTATCTTGAGTCGTCCTTCATCGGGGCCACAGGAACGATCAGGGCTGAGACGAAGGAGTTCAAGCTAGCGAGCCAAGGAAAGCAGATCGTCCGCACTTACTGGCACCACCATTCTTTTCCTAACCCTGAGCCTCAAACACGGCGTTTACCTATCAACTCAACAAATATCGCAAAACTGATCGAGGTCATTCCGGATGTGAGCGCGACGACCTACCAGAGGAGACGACGCTTCATTCTGGTCAAGCTTCTGGAGATTACGGGGGCAAGGCGAGTTGAGGTCGCGAACATCAGAGTCGAAGACATCTATAATGCGAGGAGGCTGAAGCAAGAGCCAGTTCTGAAGGTCTTCACCGCCAAGCGCTCAGGAGGAAGGGAAGAGTACAGATACTTGCCCATCTCCAAAACGGACCTCGAATTGATCGTGAATTTCATCGAAAAGTTCCGGCACCGGATCATTAAGAAGACGATCGGTGGCGCTGGTGACCAAGGCTATCTGCTGATTTCCGAGAGTAGTGGGCTAAGGCTCGCTACCGAGACTCTGACGAATGAGCTACTGCTGCTTGCCAAGGCTGCCAAAATCGAAGAGCAGGCCTGCGCACACTGAATCACACCGGGTTTTATGGAGGCCATTTCGTTTAAGTCAGGCGGCCATGGCCTGACCGGTGTTTTGCTGATAGAAGTTTGCCTCAGCTTCTGCCGGCGGTATATATCCAATCGAGCTCAGTAACCGCTGGTAGTTGTACCAGTGAACCCACTTCAAGGTGGCGATTTCGACGGCTTCGCGGCTCCTCCAAGACTGCCGGTAAATCAGTTCCGCTTTGTACAAGCCATTGATGGTTTCCGCCAAGGCGTTGTCGTAGCTGTCTCCTTTGCTACCAACAGAGGGCTCTATTCCAGCCTCAGCGAGACGCTCCGTATAACGAATAGAGACGTACTGACTACCCCTATCGCTATGGTGGATCAGACCGTCCGTGTGGCCTGGCTGCCGGGCGTAGAGTGCTTGCTCCAGGGCATCAAGCACGAAGTCCGTTTTCATGCTGTTGCTCACACGCCAGCCGACGATACGTCGCGCAAAGACATCGATAACGAAGGCTACGTAGAGCCAACCCTGCCACGTTGATACGTATGTAAAGTCTGAAACCCATAACTGATTGGGACGGTCAGCTTTGAACTGGCGTTGAACCTTGTCGAGAGGACAGACGGCGTTGCCATCAGGCACCGTGGTACGAACTACCTGGCCGCGCCGAACACCCTGCAACCCCAAGTGGCGCATCAGTCGCGCAACGGTACAACGGGCAACGTGCACCTTGTCGCGCCTGAGTTGCTTCCAGACCTTCACGACGCCATAGCAGCGCATGTTGTCCTCCCATACACGCTTGATGTCCTCACACAGCAACTCATCCTGTTGGGCGCGAGTGCTTCGCCGTTCAGGCTGTCGGGCACGTGCTGCATGCAGGTAGTAACCGGACGGAGCGATCTGCACCACGCGGCAGATCGACTCGACCCCGTAACGGTCACGGTACTCGTCAACGAAGGCGTTCAGGGTTTGTTGCGGCGGTCGAGCTCCGCCTGGGCAAAATAAGCACTGGCCAGGCGGAGGATCTCGTTCGCTTTACGCAGCTCACGATTCTCGCGCTCCAAAGCCTTGATACGGTCCCGTTCCTCAGTCGTCTGACCGGGTCGCTGGCCGTTGTCGGTCTGGTGTTTGCGCACCCAGCCATGCAGCGTCTGCGGGACACAACCAATCTTGGGTGCAATGGATTCGATGGCTGCCCACTCGGAGGGGTAGTCCTTCAAGTTCTCCAGAACCATGCGCACAGCACGTTCACGGACTTCAGGGGAGTAGCTGTTGGATTTTGTCATGCCTCATTCTCTCAAGAGTTGAGGCCTCCACGAAACCCGGTGTGATTCACACATGTTCCGGCACAGATTCATTACCAAGCTTTTTGTGGCTTTGATTGAACAACATGAGTACGAGAATGGGGACGATTTCCGACGCGCTCTCCTGGATGGTGAGACTCTCAAGAGGAAGGTTCAAGAGTACACGGGTCACACCTCGATCAGCAGTCTTGAGCCGTACATTCACTTGGCATTCGAGGAAGTGGCGAGGTTTGGAAGCACCTTGGACCTGATTAAAGCAAAGCTTGCCGTCGAATCTCTACAGTCCAATCTTAAGGATGTTGCTCTCGAACTCAGCCACGGCAGGAGTCCTACTGAACTGAGCGTCCTCCTCAGCGACTACATCAACTTGGCGCTGGAGGAACTCAGCAGCGCCTCTATTTCTATCGAGCGCTGACAAGATATGGGCAGAATGAGTTCATATGGGAATCCGGCTCAGGATCACCTGGAAAAAACCATTTCTCTGGATAGCTTGCTGGATATCGACGCGCCGCACACCTATCTGGTGCGGGCGCACGGGGACAGCATGACCGGAGCGGGTATTTTCGACGGTGACGTGCTCGTGGTCAGCCGGGCCCTGACAGCGAGACACGGCGATATCGTCATCGCCGCGATCAATGGCGACAGTTTCGTCAAACGCTTTACCTCGCAAAGCGGGCAATTGGTGCTGTGTTCGGAGAACCCAAGGTATCCGCCTCGGTACATTCTCGAAGGCGATGAGCTGCTTATCTGGGGGGTGGTCACGGACAGCATACGGCGGCACGGCAATCATGGCTGAGCGCGTAATAGCCTTGATCGACTGCAATGCCTTTTATGCATCCTGCGAGCGGGTGTTCCGTCCGGATCTAATGAAGACGCCCATCGTTGTGCTCAGCAATAACGATGGCTGTGTCATCGCCCGGTCCGCCGATGCCAAACCCTTCATCAAGATGGGCGCGCCGTACTTTCAGATCAGGGAGACGCTGCGGCAGCACGGCATCATCGCATTCTCCAGTAATTACGAGCTGTATTAAGTTAAGTGGAATGCTTTTGAGCTAGTCTGATTTCGTTGACGCTCAGGGGGCGCCCCATGACCACTCCGCCATTGCACGCACAAGTGTTAGCTCGCCATCCCAGTGCTCAAGAGTGGCTGGAGCTACTGGGTAACCTGGGGCGTGCGCCGGCCACCCTTGACGCCTATGGCCGTGCCCTTGCGCATTACTTGTTACATTGCGAAGGAAGCGGGTTGAGACCCGAATCCGCGACATTCGAACAGGTCACGCTCTACATCCGTGAGCTGTTACCTGGCGCAAAGAATGCAGTGGCAAATTCAACCTTGCAGCAACGGCTCACCGCCATCAGGTTATGGTACGACCACCTGGTTTTCCAGGGACTTCGCAAGCAAAACCCTGTCCCTCGTGGACAACATGGTCGGCTATTACAAGTGCCTGGACATGAAGGGTTCGTCAGGGGCCTGGTCCCACGGCTGACTAAGCTGCCACAGATTCCGACCGATGAGCAATGGCGCCACTTTCTCAGTATTGCGGCCAGGTCGTCTATCCGTGATCGGCTCATGCTGTCGTTGGCGTATTTTGGGGCTCTCCGCCGTTCCGAGTTGATAGCCTTGCGGATTGAAGATTTAGACGTTGCACATCGCCTGATCTCGATTCGAGCGGAAACGACCAAAGGGAAACGCAGCCGTGTCGTGTGCTATAGCCCAGACATTGCACCTACCTTAATAGCGCATCTACATGCTCTTCGCGGCGCGGGCTGGATTCAGGGTTCGTTGTTTCGGTCTGAGTCGGACCGTAATCGAGGCTCGTCACTGACCCGTTGGACGTGGAGTAAGTTGGTCGAAGGGTGGGCCAGGGAAGCAAACCTACCGCACCTGAGCACGCACACCTTTCGCCACCTTCGGCTTACCCATCTGGCCCGTGCTGGCTGGAAGCTTCATGAATTGACCACATATGCTGGCCATCGAGACCCCAAGACTACTTTGGTTTACCTGCACCTGTCGGGCGCCGATCTAACTGCAAAAATGGCGCATTCCGTCGGTAGTCTCGATGCTCGCATGGTCTCTGAGCTCTTCGAGTCTCAGGCATCGCAATGA

Protein sequences of DBSCAN-SWA_2

>NZ_CP048629|2073001:2092010|2090691_2090934_+|WP_163982910.1|DBSCAN-SWA
MAERVIALIDCNAFYASCERVFRPDLMKTPIVVLSNNDGCVIARSADAKPFIKMGAPYFQIRETLRQHGIIAFSSNYELY
>NZ_CP048629|2073001:2092010|2079255_2081121_+|WP_163982897.1|DBSCAN-SWA
MNQVSPNSFPQGIIAKGHTEKNFRFLVLSGSALALIQSQLANLPPSQRRSASRALFYFECFLWLIKHPPITSILDFRKNAFLSSQRLFYGALYSTCFLAAEVKYSGRQRLVLYFFKLLAGLSKSAPIKIFVHSDLTNSQVRECVTQFESIRIDPVRVAKLTGWHVADRNAGSFRLKMGAVFDVLGPDFTRDLHQESQKHALAHGHYGNYVNVVSRFDDFVCCYDDDPIDRQPLSPEVLQDPIFVYKLFWSFQRWHFEGYSERSQTQPTERVLANLQRQWIRIICWAKSVLVRGGLMCSPLGEVWPEGSKKLTRSLHEVGHHRYADGKALVSQKLLTQIPLSATDKEATELLFKRIKGDFNQVVQWARRQIDRIAHRLNAIDQACDQGDLITLGSRISSRAYGQPGMAMNSLIRTVKETHNGFTIIDHAMRGHLVSATGSSFSTAELAANLAMPTKYAIAPIAIWLVAQHPVLTDASLLACELFDRNGKRTGFVRTDSGSVLVVKKNRKGKQQEVALSGDAASVIELLIQITAPVRSYLKEKGDDAWRRLFIVAGGQGFQEPYTFTSQTSFAKTLRQKAFVQAHSAELGDLVTVLSLARIRATAGVLVYLKSLSIEKMAESL
>NZ_CP048629|2073001:2092010|2081167_2082389_+|WP_163981804.1|transposase|DBSCAN-SWA
MTKSNSYSPEVRERAVRMVLENLKDYPSEWAAIESIAPKIGCVPQTLHGWVRKHQTDNGQRPGQTTEERDRIKALERENRELRKANEILRLASAYFCPGGARPPQQTLNAFVDEYRDRYGVESICRVVQIAPSGYYLHAARARQPERRSTRAQQDELLCEDIKRVWEDNMRCYGVVKVWKQLRRDKVHVARCTVARLMRHLGLQGVRRGQVVRTTVPDGNAVCPLDKVQRQFKADRPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSNSMKTDFVLDALEQALYARQPGHTDGLIHHSDRGSQYVSIRYTERLAEAGIEPSVGSKGDSYDNALAETINGLYKAELIYRQSWRSREAVEIATLKWVHWYNYQRLLSSIGYIPPAEAEANFYQQNTGQAMAA
>NZ_CP048629|2073001:2092010|2077315_2078212_+|WP_163982893.1|DBSCAN-SWA
MRKDCGDSCGCDATPATDPDGPVSGNASDASVSVFAVPKMDCPSEERMIRLALNSFSNIRALSFDLSNRRLKVVHDGEVEPITAKLATLGLGASLQETSIADPGTITAAINSATSDAQESGTLRWLLGINAIMFVAEMTAGLIAQSAGLIADSLDMFADAAVYGLALYAVGRSLRLQTRAAHVAGVLQLLLALGVLIEVVRRFLVGSEPESLVMMTVAFVALIANTACLLLISKHREGGVHMKASWIFSANDVLINLGVIVAGALVAWTGSSYPDLVIGTLVGLIVLNGARRILMLKG
>NZ_CP048629|2073001:2092010|2088662_2089885_-|WP_163981804.1|transposase|DBSCAN-SWA
MTKSNSYSPEVRERAVRMVLENLKDYPSEWAAIESIAPKIGCVPQTLHGWVRKHQTDNGQRPGQTTEERDRIKALERENRELRKANEILRLASAYFCPGGARPPQQTLNAFVDEYRDRYGVESICRVVQIAPSGYYLHAARARQPERRSTRAQQDELLCEDIKRVWEDNMRCYGVVKVWKQLRRDKVHVARCTVARLMRHLGLQGVRRGQVVRTTVPDGNAVCPLDKVQRQFKADRPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSNSMKTDFVLDALEQALYARQPGHTDGLIHHSDRGSQYVSIRYTERLAEAGIEPSVGSKGDSYDNALAETINGLYKAELIYRQSWRSREAVEIATLKWVHWYNYQRLLSSIGYIPPAEAEANFYQQNTGQAMAA
>NZ_CP048629|2073001:2092010|2076787_2077210_-|WP_163982891.1|DBSCAN-SWA
MRIGQLAEAMGLDTQTIRFYERQGLLEPPCRQNNGYRIYTERHAKRLAFIRRCRILDLSLAEIRELQSYGDDPHQPCAAVNIMLDDHIAHVRSQITALHALERQLVALRGRCSDEREAAECGILEGISEGSGPADSCQRR
>NZ_CP048629|2073001:2092010|2078339_2079098_+|WP_163982895.1|DBSCAN-SWA
MDSLWLVLGLALLPALGNFSGGLAAEASQTTSRRLNYSLHAAAGLVMAVVAVEIMPRVLEGLSAWLIALSFALGGMAYIGIEKLIGSIQRRQSGQGESGQSSVWMIYIAVSIDLFSDGLLIGAGSAVAPSVAMILAAGQVLADVPEGFATIANMKDKGIPRKTRLLLSASFALPVLSAAALSYFLLRDQPESFKLAALTFTAGLLTVAAVEEMLSEAHESGEDTHISIMAFVGGFVLFVLVSAGLEGLLPKS
>NZ_CP048629|2073001:2092010|2086058_2087078_+|WP_163982905.1|transposase|DBSCAN-SWA
MLTQERLVEIHVLHGQGNSIRSIAQQLGVSRNTVRRYLRDLSVVASYPDRGPRPTKLEPYKPYLLERIEAAKPHWIPATVLFSEIQNRGYTGGITQLKHYTAEFKTVEPDPVVRFETPPGKQMQVDFTTISRHRRTIKAFVATLGFSRATYVRFSEHERQEDWLRGIEEACQYFGGVPQEILFDNAKTIMIERDAYGEGHHRWNAQLLASARDYGFIARACRPYRARTKGKVERFNGYLKNSFITPLAATLTQTGLRLDVATANAHIGPWLERVAHQRIHGTTGIKPQVLLDQERFQLRPLPRQAKRGPEQMPVTARPVPRESFQHPLSTYDRLLEAHP
>NZ_CP048629|2073001:2092010|2090990_2092010_+|WP_163982912.1|integrase|DBSCAN-SWA
MTTPPLHAQVLARHPSAQEWLELLGNLGRAPATLDAYGRALAHYLLHCEGSGLRPESATFEQVTLYIRELLPGAKNAVANSTLQQRLTAIRLWYDHLVFQGLRKQNPVPRGQHGRLLQVPGHEGFVRGLVPRLTKLPQIPTDEQWRHFLSIAARSSIRDRLMLSLAYFGALRRSELIALRIEDLDVAHRLISIRAETTKGKRSRVVCYSPDIAPTLIAHLHALRGAGWIQGSLFRSESDRNRGSSLTRWTWSKLVEGWAREANLPHLSTHTFRHLRLTHLARAGWKLHELTTYAGHRDPKTTLVYLHLSGADLTAKMAHSVGSLDARMVSELFESQASQ
>NZ_CP048629|2073001:2092010|2082922_2085046_+|WP_163982901.1|DBSCAN-SWA
MDDSNALPRELDFITHSVDAGSGLFRSAEWLNSKFDDPMWSARIAQNGKRDTVIDFRVRLDDGLLLTHSKHQGLLQSIKAYLCLSSHPLAAGGIQLAPRTVEHRVRTTIGIVDYFLLRAERFQLASYGFKLITPHDVTEFMAVLAAGQYAKNNLYAAREELRDFLRLKSLQVTEREAKSVLSKVPSIAIVDDTDESSLGLSESEIIAARVFLWINGNYKRVPITAGSDGHSFFSHQVSPSSIYSEIYRERTLVTPKFLGLVLDELHFSPSEKTFREYPMVSSMVLYDDPLPSEAGVDLYRQALKRMELLKLCGLGHISHHSLSALDNRVFLSQLKMKGKGRYRSLPQEVIFSSFRNAVEFYLGLGQPLIDGYLALAREADARGCTVGDLSRSETRELIPKRLRDIGVRIWDLSADFRGSNRGGGSALFFKRFRANEGLLQLAEVLYGAIWIILAALSARRSGELRDLAADSCLVTKSHGYYLQFDLRKRNFGKTREQALRPIPNVAARCILSLGDLHQKLSLLSSAKASDRLFSKPRYREVGLAAMSSVDAAKVLNRFSDYFEVKQDSYGRRYYIRTHQMRRFFAMTFFWAGGFGGLDTLRWFLGHTDVEHVYHYITETVPGEVLRRVGAEYASESLLTGQSDTEDLGNLLGERYGLSSFSIMQSDEVADYIEDLMMEGLLKVEPVFIDTPTGKRHEILFKITGENS
>NZ_CP048629|2073001:2092010|2082453_2082930_+|WP_163982899.1|DBSCAN-SWA
MNHYLPPTIMQFFQERWVRIFQNAVIVHAMKDSPFLLDATDFNSMSELDRFLEAHALRPLPEEPDPLSSSAEQIFDLSDSEIVISIDEGVLGVLLSLKLAVEKAGPRAGETAVYWSEFAAKVESHIESDDFADPYIRSCLVKARGVANPQQFEGLVCG
>NZ_CP048629|2073001:2092010|2089937_2090318_+|WP_163982908.1|DBSCAN-SWA
MFRHRFITKLFVALIEQHEYENGDDFRRALLDGETLKRKVQEYTGHTSISSLEPYIHLAFEEVARFGSTLDLIKAKLAVESLQSNLKDVALELSHGRSPTELSVLLSDYINLALEELSSASISIER
>NZ_CP048629|2073001:2092010|2073001_2074565_+|WP_163984141.1|transposase|DBSCAN-SWA
MPRYAPERKEALLRKLLPPHNLSVAELARQEGICEQTLYNWRKQAKAGGAVVPGDQKLTDNWSAEAKLAVVIETAALSEIELSEYCRSKGLYPQQVKAWKAACLAGQQSAKTQSQADREQAKTDKKRIRQLERELNRKEKALAEAAALLVLRKKPECLLGRRQRGYMTSLPVRQNYVEWLTEAITNGARKKPACGELGISLRTFQRWTQENTMKPDGRTTAIRPVPANALTKAERQAILELCNSEEFAHLPPSQIVPRLADQGRYVGSESSFYRVLHAADQQYRRGRSQPPRRHPAPTTHVATKPNQVWSWDITYLPSPVRGQYYYLYLIEDIYSRKAVGWEVHSAESGEEAAALLQRSILSEKCLREPLVLHSDNGAPMKSATLLTKMYDLGVTPSRGRPRVSNDNAFSESLFRTLKYCPQWPQNGFASLDDARAWVRDFMYWYNHEHRHSRIRFVTPAERHLRLDVDILAKRHSLYQQARSAHPERWSRNTRNWDAVREVTLNPEKQQNLQEEPQLQAA
>NZ_CP048629|2073001:2092010|2087969_2088626_+|WP_163982906.1|integrase|DBSCAN-SWA
MANIGRTCLGFLGYVGELYLESSFIGATGTIRAETKEFKLASQGKQIVRTYWHHHSFPNPEPQTRRLPINSTNIAKLIEVIPDVSATTYQRRRRFILVKLLEITGARRVEVANIRVEDIYNARRLKQEPVLKVFTAKRSGGREEYRYLPISKTDLELIVNFIEKFRHRIIKKTIGGAGDQGYLLISESSGLRLATETLTNELLLLAKAAKIEEQACAH
>NZ_CP048629|2073001:2092010|2075244_2076306_+|WP_163982889.1|DBSCAN-SWA
MKNHALVVGSSGIIGSAVSRLLAEQGWKATGLARRPSEEPGVEPLSADLLDPEALANALRNTAPSHLFLTTWSRQASEAENIRVNAEMVRNVLNAVRPSGSVRHVALSTGLKHYLGPFEAYGKGALPQTPFREEQGRLDVPNFYYAQEDELFAASARDGFTWSVHRPHTVTGVAVGNAMNMATTLAVYASICRFTGRPFRFPGSEVQWNGLTDMTDSAQLARHMLWASTTPDAANEAFNVVNGDVFRWKWMWARIAEWFDIEPAPFDGTPAPLEQQMAADADIWKEMSSQSGLAESDIGKLISPWHTDADLGRPIEVVTDMSKSRKLGFLDYQPSDEAFFRVFEQLRASKLIL
>NZ_CP048629|2073001:2092010|2087074_2087872_+|WP_150302439.1|DBSCAN-SWA
MNLQHQRIQHACANLKLDTLASEWSAMADRCASQEDTFAVFLEQLLRLELDARSLRSRETLLKFAGFPGRKLFEDYDFKFASGAPRKQLNELTSLAFVERAENVVLLGPSGVGKSHLAISLGHKAVAQGIKTRFIAAADLMLQLATARKQERLEQYLKRSVLAPRLLIIDEIGYLPFGREEANLFFNVIAKRYEQGSVIVTSNLPFSQWSHAFADDTTLTAALLDRLLHHAHIVQIRGESYRLKDKNAAGIAPVSANSQDLLNNN
>NZ_CP048629|2073001:2092010|2085042_2085621_+|WP_163982903.1|DBSCAN-SWA
MKEATRQVSAQLEISKRSVLARVGYLESIIQSPAEHRENMTLLAALKSQSGLAKLSVSEASISPMSLNTLKNRANDLLPGGFTTIDHLRRQAVKAIHDSTVVKPASSSVSKQDLKDKVKAQERIISQLWDEIALVTNLFRESVTLAQQFAEKCPDPADLSLFKKRRRELLSMLSLSKQPQPPSHENQPNAEG
>NZ_CP048629|2073001:2092010|2090324_2090699_+|WP_150302015.1|DBSCAN-SWA
MGRMSSYGNPAQDHLEKTISLDSLLDIDAPHTYLVRAHGDSMTGAGIFDGDVLVVSRALTARHGDIVIAAINGDSFVKRFTSQSGQLVLCSENPRYPPRYILEGDELLIWGVVTDSIRRHGNHG

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2066301:2066315	attL	NA	NA	NA	NA
WP_163984141.1|2073001_2074565_+|transposase	IS3 family transposase	NA	NA	NA	NA
WP_163982889.1|2075244_2076306_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_163982891.1|2076787_2077210_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_163982893.1|2077315_2078212_+	cation transporter	NA	NA	NA	NA
WP_163982895.1|2078339_2079098_+	peptidoglycan-binding protein	NA	NA	NA	NA
WP_163982897.1|2079255_2081121_+	hypothetical protein	NA	NA	NA	NA
WP_163981804.1|2081167_2082389_+|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	2.2e-108	71.1
WP_163982899.1|2082453_2082930_+	hypothetical protein	NA	NA	NA	NA
WP_163982901.1|2082922_2085046_+	hypothetical protein	NA	NA	NA	NA
WP_163982903.1|2085042_2085621_+	hypothetical protein	NA	NA	NA	NA
WP_163982905.1|2086058_2087078_+|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.4e-68	42.0
WP_150302439.1|2087074_2087872_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	3.2e-76	57.8
WP_163982906.1|2087969_2088626_+|integrase	site-specific integrase	NA	NA	NA	NA
WP_163981804.1|2088662_2089885_-|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	2.2e-108	71.1
WP_163982908.1|2089937_2090318_+	hypothetical protein	NA	NA	NA	NA
WP_150302015.1|2090324_2090699_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1L5C2A3	Pseudoalteromonas_phage	1.4e-13	45.0
WP_163982910.1|2090691_2090934_+	hypothetical protein	A0A218MNF2	uncultured_virus	3.9e-25	70.7
WP_163982912.1|2090990_2092010_+|integrase	site-specific integrase	NA	NA	NA	NA
2097342:2097356	attR	NA	NA	NA	NA