CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048627	Megamonas funiformis strain JCM 14723 chromosome, complete genome	8 crisprs	cas14j,csa3,cas3,DinG,cas6,cas8b1,cas7b,cas5,WYL,DEDDh	0	14	10	0
NZ_CP048628	Megamonas funiformis strain JCM 14723 plasmid putative_Mfuni1, complete sequence	0 crisprs	cas14j	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048627_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048627_1

648916-649023

Orphan

Consensus_repeat	Method
ACAGTTACAAAATGTTACGGTTAACAGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048627_1

>merge|NZ_CP048627|1|648916-649023|CRISPRCasFinder
ACAGTTACAAAATGTTACGGTTAACAGTAATAAAATGTTACGGTTAAATAATTCTAACAGTAACGAAACGTTACCGATACAGTTACAAAATGTTACGGTTAACAGTAA

>NZ_CP048627|1|1|648916-649023|CRISPRCasFinder
ACAGTTACAAAATGTTACGGTTAACAGTAA	TAAAATGTTACGGTTAAATAATTCTAACAGTAACGAAACGTTACCGAT
ACAGTTACAAAATGTTACGGTTAACAGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048627.1\|WP_008538610.1\|643058_643337_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NZ_CP048627.1\|WP_008538592.1\|651526_651676_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538593.1\|651259_651436_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538590.1\|654063_655131_+\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|237363
NZ_CP048627.1\|WP_008538602.1\|646497_646701_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379188
NZ_CP048627.1\|WP_163604671.1\|645690_646326_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197775
NZ_CP048627.1\|WP_008538601.1\|646766_647354_+\|Rha-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378235
NZ_CP048627.1\|WP_008538611.1\|642731_643052_+\|ribosomal-processing-cysteine-protease-Prp	unknown	unknown	gnl\|CDD\|381747
NZ_CP048627.1\|WP_008538586.1\|657314_658577_+\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234586
NZ_CP048627.1\|WP_008538600.1\|647633_647834_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538595.1\|649685_651008_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP048627.1\|WP_008538585.1\|658599_660402_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_CP048627.1\|WP_008538599.1\|647897_648083_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538587.1\|655799_657290_+\|coproporphyrinogen-dehydrogenase-HemZ	unknown	unknown	gnl\|CDD\|236187
NZ_CP048627.1\|WP_039881440.1\|655356_655803_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP048627.1\|WP_008538605.1\|645077_645230_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538594.1\|651056_651242_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538591.1\|651711_652107_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236603
NZ_CP048627.1\|WP_008538607.1\|644679_645081_-\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl\|CDD\|226180
NZ_CP048627.1\|WP_008538598.1\|648174_648519_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048627.1\|WP_008538610.1\|643058_643337_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	3.4652e-49
NZ_CP048627.1\|WP_008538590.1\|654063_655131_+\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|237363	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional.	7.03702e-176
NZ_CP048627.1\|WP_008538602.1\|646497_646701_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	1.53319e-05
NZ_CP048627.1\|WP_163604671.1\|645690_646326_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	9.47711e-12
NZ_CP048627.1\|WP_008538601.1\|646766_647354_+\|Rha-family-transcriptional-regulator	gnl\|CDD\|378235	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha). Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that Rha is a phage regulatory protein.	4.9166e-26
NZ_CP048627.1\|WP_008538611.1\|642731_643052_+\|ribosomal-processing-cysteine-protease-Prp	gnl\|CDD\|381747	cd16332, Prp-like, ribosomal-processing cysteine protease Prp and similar proteins. This model represents a family of cysteine proteases that include members found to cleave the N-terminus extension of ribosomal subunit L27 in eubacteria. Proteins in this family are distinguished by a pair of invariant histidine and cysteine residues with conserved spacing that form the classic catalytic dyad of a cysteine protease. Dependence of Staphylococcus aureus on L27 cleavage by Prp makes the enzyme a target for antibiotic development.	1.21407e-30
NZ_CP048627.1\|WP_008538586.1\|657314_658577_+\|histidine--tRNA-ligase	gnl\|CDD\|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	0
NZ_CP048627.1\|WP_008538607.1\|644679_645081_-\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl\|CDD\|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	8.61177e-23
NZ_CP048627.1\|WP_008538595.1\|649685_651008_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP048627.1\|WP_008538585.1\|658599_660402_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NZ_CP048627.1\|WP_039881440.1\|655356_655803_+\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	6.84527e-44
NZ_CP048627.1\|WP_008538587.1\|655799_657290_+\|coproporphyrinogen-dehydrogenase-HemZ	gnl\|CDD\|236187	PRK08207, PRK08207, coproporphyrinogen III oxidase; Provisional.	1.86213e-176
NZ_CP048627.1\|WP_008538591.1\|651711_652107_+\|hypothetical-protein	gnl\|CDD\|236603	PRK09640, PRK09640, RNA polymerase sigma factor SigX; Reviewed.	0.00111958

>NZ_CP048627.1|WP_008538598.1|648174_648519_+|hypothetical-protein
MNNKSIPPIYENFTQLNNGEIPQFDYIKIYHSFLKLKANELILFSLLYQECEADAVYKKGLNYLYKRTNTTKHTVLRCLSVLIDRNLITKKQGTNRNPSEYHINYQVLQQYIDQ
>NZ_CP048627.1|WP_008538599.1|647897_648083_+|hypothetical-protein
METVKSRFITAKEIAEDCNISISKAYELIREMNKEVEAMGKITLKGKINRHFYEKKINPTD
>NZ_CP048627.1|WP_008538600.1|647633_647834_+|hypothetical-protein
MDNLITIKIKATSFDRLIDELKSLKDMYLDFSNNTDNIITGSSFHIIVKDLETLIAKYEYKKSPSH
>NZ_CP048627.1|WP_008538601.1|646766_647354_+|Rha-family-transcriptional-regulator
MDNQNNLVHMFKNQVVVSSVQLAEHFDKRHCDILRLLNALLRSANKQRLSKHFFKSNYKDETGKNNTMYLMDRDGFSLLVMSFKGEKALKWKLDFIDAFNAMEQEIRNNEHKLNTDLKDKLYNTSIKLEKVKILHNRLFEESTNQSALLNEKRAELLRYKAFRDLIIAKQLENDSAGLSYDDVDEIDNRIFGEID
>NZ_CP048627.1|WP_008538602.1|646497_646701_+|helix-turn-helix-transcriptional-regulator
MKLDKSKLELAMADKCYSKTRLVANAGICYSSLIKLLNGRMKLTPQTLGKIAKTLEVKPKDLLKDED
>NZ_CP048627.1|WP_163604671.1|645690_646326_-|helix-turn-helix-domain-containing-protein
MNLDKNLRIYRERAGYATAKEFADALDVPYNTYTAYENQKREPKLEMLIKIADLLNVSLDDLLGRTPADEDERLKKEINDLLNPNELKNLRVVINNIDEKNIYCSFLELNYNFSLNKSHIVSTINALNKTMEDKKKNIFQKSLFSSYILNIIILTDRRIDDICFDKTNLSIDEKNKEIQKMLNIQNELSKFLGIDKQLLKLNNEYDMSKNK
>NZ_CP048627.1|WP_008538605.1|645077_645230_-|hypothetical-protein
MENITNKPVPDAKIKIITSKNSPELAKKMKEASAYFMEINDQLYKDLANK
>NZ_CP048627.1|WP_008538607.1|644679_645081_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MNTEKQIINILLDDILDFHQQLTDRYRMESGIHDMNLLQSAVNSPFQSFAGQDLYPTIFDKASRLCYGLTKNHPFNDGNKRTAIHSMLVYLYINDILLDYESIELENIIIDIASSKMSCEELTQWLQDHVKKI
>NZ_CP048627.1|WP_008538610.1|643058_643337_+|50S-ribosomal-protein-L27
MFNFDLQLFAHKKGVSSTRNGRDSESKRLGVKEHAGTIVTAGSILVRQRGTHFHPGANVGIGKDDTLFAKIAGRVAFERKGRYNRQISVYAE
>NZ_CP048627.1|WP_008538611.1|642731_643052_+|ribosomal-processing-cysteine-protease-Prp
MIKISVMRQDDDKVIGLLVEGHAGAGAYGQDIVCAGISALAQSVILGLAKHLHREINYDVKPGYLSVALKDKADDLTEAVFAVAVLGFAEIEKSNPKNVSVLNIRR
>NZ_CP048627.1|WP_008538595.1|649685_651008_+|replicative-DNA-helicase
MNDKIPINIEAEQAVLGAILISKDTSMAIDEINLKVDDFYRSSHRIIYRAMLMLFKANKPIDNLTVIEYLNKTNELEKAGGIACITSLVNCVPSASNIKYYADMVKDTAIRRKYIQAGEQIKNIAYNAENIDSTVSKTEKLIFDISKENVYKGDIIEPTDLMIECMQEIEYQYEHNKNGVSGIDTGYVDLNKITGGFQNSDFIIIGARPAMGKTALVLSMASKIAKKNIPVAVFSLEMSKAQLGKRLISGASCVNSQKISTGRLDENEWQRVIKATDILSKRPIYIEDSAEINILQLRSKARQLKRQKDIKLIIIDYLQLLASERKRDNKVQEVSDISRQLKILAKELNIPVIALAQLSRSVEARQDKRPMLSDLRESGSIEQDADIVMFLYRDEYYNANTNNKNLAELIISKHRNGSTGKVNLYYHHDYCFFDDCIMDI
>NZ_CP048627.1|WP_008538594.1|651056_651242_+|hypothetical-protein
MTDVIIFHTDEQGNKTACIMSNSNTAFDDLFEFIKDDNFKMIKTKLNEKAYKAFISQHCEN
>NZ_CP048627.1|WP_008538593.1|651259_651436_+|hypothetical-protein
MINVAIFNDNGKEKELILLGVKGRNVFDDIEQFKNQNYKVKISTVSKESLKAFLKANI
>NZ_CP048627.1|WP_008538592.1|651526_651676_+|hypothetical-protein
MTNIDQLDKILQSLSTELQKNKEIEDLKQIDDKFMENVILDLNSELSKM
>NZ_CP048627.1|WP_008538591.1|651711_652107_+|hypothetical-protein
MNIAKKYLEQAYIGYHRIICYDLMIKGIQEDLSKFNNDKIIIPRLKAELISYEKQRRYWLNKRIELKQFIINLNIKDKIKQVLILRFIELKKRREISDILHYSLSYIDRLLKRGLFFIDEKLKSSSQKVVI
>NZ_CP048627.1|WP_008538590.1|654063_655131_+|branched-chain-amino-acid-aminotransferase
MVKFVETKTLKEKVDVSTIGFGTHFTDYMFEMTYDEGQGWHDAQIVPYEEIKVSPANATLHYGQAIFEGMKAFRQGKDVVIFRTKDHLNRLNNSARILDIPPIDVDLVYDALHQLITIEKDWVPNKKGQSLYIRPFIFADDPFLGVSVSKRYKFYIILSPVAAYYAHGFAPVKIMVEDTYVRATKGGLGEAKTPANYAASLHAGLEAHKNGYDQVLWLDGVHRKYIGEVGSMNILFKIDGKIVTPALDGTILNGITRRTVLAVAKEWGIEVEERPITIDELVEDYENGKLEEVFGSGTAAVISPVGVLGYKDKVMTINDGKIGPFAQKMFNYITGLQSGEEKDIHGFIDKVTTVD
>NZ_CP048627.1|WP_039881440.1|655356_655803_+|transcriptional-repressor
MEDLKQKLAGPQYKLTPQRKIVLQIFLDRPSQHLSAEDVHFILKEQKCEIGLATVYRSLELLSDLNILNYLDFGDGCRRYELNDASPNEHQHHHLICVECGKVLEFTDDLLGNLEEKIEDTCKFKIVDHQLKFFGYCEDCQKKRELKS
>NZ_CP048627.1|WP_008538587.1|655799_657290_+|coproporphyrinogen-dehydrogenase-HemZ
MKIKTFYLNSTKEIIVKIVKEILVLFKVEINDANDTIFDYDELKIENIYDDVALNGVKTVLTLRKDEKLWTYTRQSFLHDDESVKAGTNRLIKLNLYHIFCEDLQAKKAPWGILHGVRPTKIVHRLMEQGLDRQGVIGRLQDDYEVQIDKANLITDIAYLQLPFLAKANDPKLISVYVGIPFCPSRCLYCSFPSSILPSSEMTRKYLQTLNYEITKIKALIEQYDFKVQSIYVGGGTPTSLNENDFDDLLSLVAKSFKGDYVEEFTVEAGRPDSLSLEKAKSIVKYGADRVSVNPQTMQDRTLSLIGRKHTSADILRAFKQVRQAGIKHVNTDLIIGLPGEDIKDAKDTINKVIDLAPDDITLHALALKKGSELKLIRDNIVLPDDETVQAMAKIMTTAIDEYGLIPYYIYRQGYMSGQLENVGYSKKGQEGIYNIQIMGERQTILGVGGAATSKITYPGKRLQTSFNAKDLYTYLNSIDKYIERRAMLLKEAYGD
>NZ_CP048627.1|WP_008538586.1|657314_658577_+|histidine--tRNA-ligase
MLTKAPRGTKDILPDKVGNWLYLENLIRKLCGQYGYREIRTPIFEHTELFQRGIGETTDVVEKEMYTFTDRGNRSITLRPENTAAAVRSYLENKLYADTNLCKLFYIGSMFRYDRPQAGRYREFHQFGVEALGEANPAVDAEIISLAVQFLKDLGLKDIKLLLNSVGCPKCRPVYRQRLQEFFKPVIDEMCDDCKSRYDRNPMRLLDCKNEKCKELAQDAPAITDCLCDECNDHFHKVQEFLTAAGIEFELDPGLVRGLDYYTKTAFELKYVPLGAQSAVLGGGRYDGLIEECGGKSTPAVGFATGLERVLLALEMQNLLPETNYDTDVFIVALGDTVQAKAFEILANLRRGGFKAAMDFAGRSMKAQMKQANKANAKFTIILGEDELQANSVVLKNMNESTQETISIDELLNKLTTLTK
>NZ_CP048627.1|WP_008538585.1|658599_660402_+|aspartate--tRNA-ligase
METMEGMKRTHHCGELRATNEGQEVVLCGWVSHRRDHGGLIFIDLRDRSGLVQLVFAEDKIGADQFPKAESLRSEFVVAVRGKVSLRDKETINPNMETGEIEIYAEELRILNKALTPPFYIQDGIDVDENVRLKYRYLDLRRPEMQKNIMLRHRVTKLMRDYFDEHGFLEIETPMLTKSTPEGARDYLVPSRVNPGKFYALPQSPQIFKQLLMVAGYEKYFQIVRCFRDEDLRADRQPEFTQLDIEMSFVDQDYILNLMEGLVSGLFEKTIGEKVQTPFLRMTWDEAMERYGSDKPDIRFGMELMDISEYVKGSDFKVFKSVLDNGGQVKVIKVDGYANIPRRELDGLVEYAQRYGAKGLAWIQYTEIEIKSPFKKFYSEETFQKIKEATNAQTGDLLLVVADKPLVVAQALGELRLEMGRRRGLINENEYKFLWVVDFPMFEYDEENKRWKAMHHPFTAPRDEDVQYLTTDPGRVKAKAYDMVLNGVEIGGGSLRIYNSDTQEKVFEAIGLTPEQAHEKFGFMLDAFKYGTPPHGGLAFGLDRMVMLMAKRNSIRDVIPFPKTQSAGCLMTQAPSEVDAKQLRELSIRTAVAPKKKAEN

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Crispr_ID: NZ_CP048627_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048627_2

652972-653528

Orphan

Consensus_repeat	Method
GATAAATATCAACAGGTGCTGTACGAAAAC	PILER-CR
GATAAATATCAACAGGTGCTGTACGAAAAC	CRISPRCasFinder
GATAAATATCAACAGGTGCTGTACGAAAAC	CRT

8 spacers

The CRISPR arrays of NZ_CP048627_2

>merge|NZ_CP048627|2|652972-653528|PILER-CR,CRISPRCasFinder,CRT
GATAAATATCAACAGGTGCTGTACGAAAACAATTTTTTAGAAAATCCATTTAGAGAATACATATTAGATAAATATCAACAGGTGCTGTACGAAAACGCAGGAATATTTTCTTTTATTCTTTGTAAAATACCAGATAAATATCAACAGGTGCTGTACGAAAACTTAGGTGTTCATGCTTCTAATCCTATGCACCAATTGATAAATATCAACAGGTGCTGTACGAAAACGCCATTAATCATTACCACCTTAATATCACTATTATTGGATAAATATCAACAGGTGCTGTACGAAAACGTAAGTTCACCGCCACCTATTACAAAACCGATAACGGATAAATATCAACAGGTGCTGTACGAAAACCACTTTTTAAATATATGCAAGTGTTTTTTTTATTAGATAAATATCAACAGGTGCTGTACGAAAACCTACAATACTTTACACGACTATTATTAGTGATAAATGATAAATATCAACAGGTGCTGTACGAATACCCTATACAATCATAATCTTCATTGGCACATACCCATGATAAATATCAACAGATACTGTATAAAGAA

>NZ_CP048627|2|1|652972-653462|PILER-CR
GATAAATATCAACAGGTGCTGTACGAAAAC	AATTTTTTAGAAAATCCATTTAGAGAATACATATTA
GATAAATATCAACAGGTGCTGTACGAAAAC	GCAGGAATATTTTCTTTTATTCTTTGTAAAATACCA
GATAAATATCAACAGGTGCTGTACGAAAAC	TTAGGTGTTCATGCTTCTAATCCTATGCACCAATT
GATAAATATCAACAGGTGCTGTACGAAAAC	GCCATTAATCATTACCACCTTAATATCACTATTATTG
GATAAATATCAACAGGTGCTGTACGAAAAC	GTAAGTTCACCGCCACCTATTACAAAACCGATAACG
GATAAATATCAACAGGTGCTGTACGAAAAC	CACTTTTTAAATATATGCAAGTGTTTTTTTTATTA
GATAAATATCAACAGGTGCTGTACGAAAAC	CTACAATACTTTACACGACTATTATTAGTGATAAAT
GATAAATATCAACAGGTGCTGTACGAATAC

>NZ_CP048627|2|2|652972-653528|CRISPRCasFinder
GATAAATATCAACAGGTGCTGTACGAAAAC	AATTTTTTAGAAAATCCATTTAGAGAATACATATTA
GATAAATATCAACAGGTGCTGTACGAAAAC	GCAGGAATATTTTCTTTTATTCTTTGTAAAATACCA
GATAAATATCAACAGGTGCTGTACGAAAAC	TTAGGTGTTCATGCTTCTAATCCTATGCACCAATT
GATAAATATCAACAGGTGCTGTACGAAAAC	GCCATTAATCATTACCACCTTAATATCACTATTATTG
GATAAATATCAACAGGTGCTGTACGAAAAC	GTAAGTTCACCGCCACCTATTACAAAACCGATAACG
GATAAATATCAACAGGTGCTGTACGAAAAC	CACTTTTTAAATATATGCAAGTGTTTTTTTTATTA
GATAAATATCAACAGGTGCTGTACGAAAAC	CTACAATACTTTACACGACTATTATTAGTGATAAAT
GATAAATATCAACAGGTGCTGTACGAATAC	CCTATACAATCATAATCTTCATTGGCACATACCCAT
GATAAATATCAACAGATACTGTATAAAGAA

>NZ_CP048627|2|1|652972-653528|CRT
GATAAATATCAACAGGTGCTGTACGAAAAC	AATTTTTTAGAAAATCCATTTAGAGAATACATATTA
GATAAATATCAACAGGTGCTGTACGAAAAC	GCAGGAATATTTTCTTTTATTCTTTGTAAAATACCA
GATAAATATCAACAGGTGCTGTACGAAAAC	TTAGGTGTTCATGCTTCTAATCCTATGCACCAATT
GATAAATATCAACAGGTGCTGTACGAAAAC	GCCATTAATCATTACCACCTTAATATCACTATTATTG
GATAAATATCAACAGGTGCTGTACGAAAAC	GTAAGTTCACCGCCACCTATTACAAAACCGATAACG
GATAAATATCAACAGGTGCTGTACGAAAAC	CACTTTTTAAATATATGCAAGTGTTTTTTTTATTA
GATAAATATCAACAGGTGCTGTACGAAAAC	CTACAATACTTTACACGACTATTATTAGTGATAAAT
GATAAATATCAACAGGTGCTGTACGAATAC	CCTATACAATCATAATCTTCATTGGCACATACCCAT
GATAAATATCAACAGATACTGTATAAAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048627.1\|WP_008538581.1\|663483_665565_+\|ATP-dependent-DNA-helicase-RecG	unknown	unknown	gnl\|CDD\|236794
NZ_CP048627.1\|WP_008538593.1\|651259_651436_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538590.1\|654063_655131_+\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|237363
NZ_CP048627.1\|WP_008538584.1\|660532_661369_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_CP048627.1\|WP_008538583.1\|661475_662630_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226012
NZ_CP048627.1\|WP_008538601.1\|646766_647354_+\|Rha-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378235
NZ_CP048627.1\|WP_008538582.1\|662802_663282_-\|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377924
NZ_CP048627.1\|WP_008538586.1\|657314_658577_+\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234586
NZ_CP048627.1\|WP_008538600.1\|647633_647834_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538595.1\|649685_651008_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP048627.1\|WP_008538596.1\|648535_649525_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378956
NZ_CP048627.1\|WP_008538599.1\|647897_648083_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538587.1\|655799_657290_+\|coproporphyrinogen-dehydrogenase-HemZ	unknown	unknown	gnl\|CDD\|236187
NZ_CP048627.1\|WP_039881440.1\|655356_655803_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP048627.1\|WP_008538592.1\|651526_651676_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538594.1\|651056_651242_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538591.1\|651711_652107_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236603
NZ_CP048627.1\|WP_008538580.1\|665609_666296_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP048627.1\|WP_008538585.1\|658599_660402_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_CP048627.1\|WP_008538598.1\|648174_648519_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048627.1\|WP_008538581.1\|663483_665565_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP048627.1\|WP_008538590.1\|654063_655131_+\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|237363	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional.	7.03702e-176
NZ_CP048627.1\|WP_008538584.1\|660532_661369_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	8.17376e-69
NZ_CP048627.1\|WP_008538596.1\|648535_649525_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|378956	pfam12802, MarR_2, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.	0.000289459
NZ_CP048627.1\|WP_008538582.1\|662802_663282_-\|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	4.20232e-13
NZ_CP048627.1\|WP_008538586.1\|657314_658577_+\|histidine--tRNA-ligase	gnl\|CDD\|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	0
NZ_CP048627.1\|WP_008538595.1\|649685_651008_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP048627.1\|WP_008538585.1\|658599_660402_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NZ_CP048627.1\|WP_008538601.1\|646766_647354_+\|Rha-family-transcriptional-regulator	gnl\|CDD\|378235	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha). Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that Rha is a phage regulatory protein.	4.9166e-26
NZ_CP048627.1\|WP_039881440.1\|655356_655803_+\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	6.84527e-44
NZ_CP048627.1\|WP_008538587.1\|655799_657290_+\|coproporphyrinogen-dehydrogenase-HemZ	gnl\|CDD\|236187	PRK08207, PRK08207, coproporphyrinogen III oxidase; Provisional.	1.86213e-176
NZ_CP048627.1\|WP_008538583.1\|661475_662630_-\|hypothetical-protein	gnl\|CDD\|226012	COG3481, COG3481, Predicted HD-superfamily hydrolase [General function prediction only].	8.61778e-07
NZ_CP048627.1\|WP_008538591.1\|651711_652107_+\|hypothetical-protein	gnl\|CDD\|236603	PRK09640, PRK09640, RNA polymerase sigma factor SigX; Reviewed.	0.00111958
NZ_CP048627.1\|WP_008538580.1\|665609_666296_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.18461e-26

>NZ_CP048627.1|WP_008538591.1|651711_652107_+|hypothetical-protein
MNIAKKYLEQAYIGYHRIICYDLMIKGIQEDLSKFNNDKIIIPRLKAELISYEKQRRYWLNKRIELKQFIINLNIKDKIKQVLILRFIELKKRREISDILHYSLSYIDRLLKRGLFFIDEKLKSSSQKVVI
>NZ_CP048627.1|WP_008538592.1|651526_651676_+|hypothetical-protein
MTNIDQLDKILQSLSTELQKNKEIEDLKQIDDKFMENVILDLNSELSKM
>NZ_CP048627.1|WP_008538593.1|651259_651436_+|hypothetical-protein
MINVAIFNDNGKEKELILLGVKGRNVFDDIEQFKNQNYKVKISTVSKESLKAFLKANI
>NZ_CP048627.1|WP_008538594.1|651056_651242_+|hypothetical-protein
MTDVIIFHTDEQGNKTACIMSNSNTAFDDLFEFIKDDNFKMIKTKLNEKAYKAFISQHCEN
>NZ_CP048627.1|WP_008538595.1|649685_651008_+|replicative-DNA-helicase
MNDKIPINIEAEQAVLGAILISKDTSMAIDEINLKVDDFYRSSHRIIYRAMLMLFKANKPIDNLTVIEYLNKTNELEKAGGIACITSLVNCVPSASNIKYYADMVKDTAIRRKYIQAGEQIKNIAYNAENIDSTVSKTEKLIFDISKENVYKGDIIEPTDLMIECMQEIEYQYEHNKNGVSGIDTGYVDLNKITGGFQNSDFIIIGARPAMGKTALVLSMASKIAKKNIPVAVFSLEMSKAQLGKRLISGASCVNSQKISTGRLDENEWQRVIKATDILSKRPIYIEDSAEINILQLRSKARQLKRQKDIKLIIIDYLQLLASERKRDNKVQEVSDISRQLKILAKELNIPVIALAQLSRSVEARQDKRPMLSDLRESGSIEQDADIVMFLYRDEYYNANTNNKNLAELIISKHRNGSTGKVNLYYHHDYCFFDDCIMDI
>NZ_CP048627.1|WP_008538596.1|648535_649525_+|MarR-family-transcriptional-regulator
MAGDAKANINENIKKANIDYLKSTTFIKYYLPFFKLGLNADELHTLNLIFSFEADNKIYIGSSKYLCDMLNYSKPRALRILKSLTDKGYLKKEASNGRINSIYKINHMFLYQQIKNNENYSQLADNKQLQNVTVNSNKMLRLNNSNSNETLPIQLQNVTVNSNDLLPNKNIYKNNNKNIYAHLENEQVYNHEDDKQKEDDNHSSNIIKQDTKNKAIKKQNKELNELQEKQFDKFWQAYPKKVSKKEAQKSWNKINPSLELFEKILKALEIVKQTGQWNTDNGKFIPYPATWLNQERWTDEIKMMQDIKPVIEPKLKIKPVYENMLENDF
>NZ_CP048627.1|WP_008538598.1|648174_648519_+|hypothetical-protein
MNNKSIPPIYENFTQLNNGEIPQFDYIKIYHSFLKLKANELILFSLLYQECEADAVYKKGLNYLYKRTNTTKHTVLRCLSVLIDRNLITKKQGTNRNPSEYHINYQVLQQYIDQ
>NZ_CP048627.1|WP_008538599.1|647897_648083_+|hypothetical-protein
METVKSRFITAKEIAEDCNISISKAYELIREMNKEVEAMGKITLKGKINRHFYEKKINPTD
>NZ_CP048627.1|WP_008538600.1|647633_647834_+|hypothetical-protein
MDNLITIKIKATSFDRLIDELKSLKDMYLDFSNNTDNIITGSSFHIIVKDLETLIAKYEYKKSPSH
>NZ_CP048627.1|WP_008538601.1|646766_647354_+|Rha-family-transcriptional-regulator
MDNQNNLVHMFKNQVVVSSVQLAEHFDKRHCDILRLLNALLRSANKQRLSKHFFKSNYKDETGKNNTMYLMDRDGFSLLVMSFKGEKALKWKLDFIDAFNAMEQEIRNNEHKLNTDLKDKLYNTSIKLEKVKILHNRLFEESTNQSALLNEKRAELLRYKAFRDLIIAKQLENDSAGLSYDDVDEIDNRIFGEID
>NZ_CP048627.1|WP_008538590.1|654063_655131_+|branched-chain-amino-acid-aminotransferase
MVKFVETKTLKEKVDVSTIGFGTHFTDYMFEMTYDEGQGWHDAQIVPYEEIKVSPANATLHYGQAIFEGMKAFRQGKDVVIFRTKDHLNRLNNSARILDIPPIDVDLVYDALHQLITIEKDWVPNKKGQSLYIRPFIFADDPFLGVSVSKRYKFYIILSPVAAYYAHGFAPVKIMVEDTYVRATKGGLGEAKTPANYAASLHAGLEAHKNGYDQVLWLDGVHRKYIGEVGSMNILFKIDGKIVTPALDGTILNGITRRTVLAVAKEWGIEVEERPITIDELVEDYENGKLEEVFGSGTAAVISPVGVLGYKDKVMTINDGKIGPFAQKMFNYITGLQSGEEKDIHGFIDKVTTVD
>NZ_CP048627.1|WP_039881440.1|655356_655803_+|transcriptional-repressor
MEDLKQKLAGPQYKLTPQRKIVLQIFLDRPSQHLSAEDVHFILKEQKCEIGLATVYRSLELLSDLNILNYLDFGDGCRRYELNDASPNEHQHHHLICVECGKVLEFTDDLLGNLEEKIEDTCKFKIVDHQLKFFGYCEDCQKKRELKS
>NZ_CP048627.1|WP_008538587.1|655799_657290_+|coproporphyrinogen-dehydrogenase-HemZ
MKIKTFYLNSTKEIIVKIVKEILVLFKVEINDANDTIFDYDELKIENIYDDVALNGVKTVLTLRKDEKLWTYTRQSFLHDDESVKAGTNRLIKLNLYHIFCEDLQAKKAPWGILHGVRPTKIVHRLMEQGLDRQGVIGRLQDDYEVQIDKANLITDIAYLQLPFLAKANDPKLISVYVGIPFCPSRCLYCSFPSSILPSSEMTRKYLQTLNYEITKIKALIEQYDFKVQSIYVGGGTPTSLNENDFDDLLSLVAKSFKGDYVEEFTVEAGRPDSLSLEKAKSIVKYGADRVSVNPQTMQDRTLSLIGRKHTSADILRAFKQVRQAGIKHVNTDLIIGLPGEDIKDAKDTINKVIDLAPDDITLHALALKKGSELKLIRDNIVLPDDETVQAMAKIMTTAIDEYGLIPYYIYRQGYMSGQLENVGYSKKGQEGIYNIQIMGERQTILGVGGAATSKITYPGKRLQTSFNAKDLYTYLNSIDKYIERRAMLLKEAYGD
>NZ_CP048627.1|WP_008538586.1|657314_658577_+|histidine--tRNA-ligase
MLTKAPRGTKDILPDKVGNWLYLENLIRKLCGQYGYREIRTPIFEHTELFQRGIGETTDVVEKEMYTFTDRGNRSITLRPENTAAAVRSYLENKLYADTNLCKLFYIGSMFRYDRPQAGRYREFHQFGVEALGEANPAVDAEIISLAVQFLKDLGLKDIKLLLNSVGCPKCRPVYRQRLQEFFKPVIDEMCDDCKSRYDRNPMRLLDCKNEKCKELAQDAPAITDCLCDECNDHFHKVQEFLTAAGIEFELDPGLVRGLDYYTKTAFELKYVPLGAQSAVLGGGRYDGLIEECGGKSTPAVGFATGLERVLLALEMQNLLPETNYDTDVFIVALGDTVQAKAFEILANLRRGGFKAAMDFAGRSMKAQMKQANKANAKFTIILGEDELQANSVVLKNMNESTQETISIDELLNKLTTLTK
>NZ_CP048627.1|WP_008538585.1|658599_660402_+|aspartate--tRNA-ligase
METMEGMKRTHHCGELRATNEGQEVVLCGWVSHRRDHGGLIFIDLRDRSGLVQLVFAEDKIGADQFPKAESLRSEFVVAVRGKVSLRDKETINPNMETGEIEIYAEELRILNKALTPPFYIQDGIDVDENVRLKYRYLDLRRPEMQKNIMLRHRVTKLMRDYFDEHGFLEIETPMLTKSTPEGARDYLVPSRVNPGKFYALPQSPQIFKQLLMVAGYEKYFQIVRCFRDEDLRADRQPEFTQLDIEMSFVDQDYILNLMEGLVSGLFEKTIGEKVQTPFLRMTWDEAMERYGSDKPDIRFGMELMDISEYVKGSDFKVFKSVLDNGGQVKVIKVDGYANIPRRELDGLVEYAQRYGAKGLAWIQYTEIEIKSPFKKFYSEETFQKIKEATNAQTGDLLLVVADKPLVVAQALGELRLEMGRRRGLINENEYKFLWVVDFPMFEYDEENKRWKAMHHPFTAPRDEDVQYLTTDPGRVKAKAYDMVLNGVEIGGGSLRIYNSDTQEKVFEAIGLTPEQAHEKFGFMLDAFKYGTPPHGGLAFGLDRMVMLMAKRNSIRDVIPFPKTQSAGCLMTQAPSEVDAKQLRELSIRTAVAPKKKAEN
>NZ_CP048627.1|WP_008538584.1|660532_661369_+|YitT-family-protein
MLNHAMRYVIIIIGCLLAAAAYNLFLIPMNFLSGGLAGIAFILYYLFNLPIGIMNFLLNIPILYIAYRYFGRLYFFDTILGTILFSVALDLTAFLNAYPPLSEPMLCAIVGGVISGIGFGLIFRSNCNTGGVDVIAALIKKLYSYNVGTMVFVLDCLIILSSVWLFDYNIAVYTFICMYIGGVLTNKMIDGFNMRKSIMIITEKPEAIADAIMIELDRGVTFLYGQGAYTKNNRKVIYVVITMRQVSRIKELTLDIDKNAFFIISDAREVTGEGFSHH
>NZ_CP048627.1|WP_008538583.1|661475_662630_-|hypothetical-protein
MQNLSRRNFFKLGAGVLAGAALFDLTGLNHKAFAQKITPSNFKINPIKLSDLPPATKAPLNSQLVNNAYDYIISSVEKITDNKLRQQTLDLIKDTRPKFMQLYTSSTDVTNIYNELANKGLIDTSIISPEQLFPPLKSNKNPQDFISAPGSGYASHHSYPGGLPTHTAANLSISEGVVNTYKLIFGYAVNTDIVLSAQALHDLAKPWVFQWNEDGTCLPEYSIAGTGAHHILGLVEAIYRNLPAEEIVAQACAHNHPGSDKDEESVVNWIKAASIIAQKNPVKYGLLDKSGDKLPTPQHQEGYIVHLGDHDWVLSGIVAKNTVIYLKEIAKTDYNFSDKDLNGKLFNDFRNYIGAQVSFMYLHNLMAQNGLEDVRNLVHQIVLK
>NZ_CP048627.1|WP_008538582.1|662802_663282_-|copper-amine-oxidase-N-terminal-domain-containing-protein
MKLISRLLLLSFFALAVFTYILPVEATSTNQESTPTQQDEIIVNGTKINSYPIIINDCTLVPARDVCKNLGFTISWDSDEQTATINSKNMKSTVKIGQDLYTAQSTIALGMTAPISLGSGPLLINDKLYIPAELFRILQGNNPESLIYNNHQILLNTIE
>NZ_CP048627.1|WP_008538581.1|663483_665565_+|ATP-dependent-DNA-helicase-RecG
MDIRENIQFLKGVGPKKAQALKKIGIENIYDLITYYPRRYEDQSQIVPIGRIKVGEVVNIQGRIMAMAEKNTRRGLKLLTIMLADDTGVVQLNFFNQDYLKKKLKVQKSSLFVHGKVGYAYGGYGQLAISQIISFDVINNDNIDSEENINSCAFMPIYTIPDYIKPKDFRNLIEQVCTQDILVKDVVPNFIREKYDLWDKQTAIKKIHFPQTRQELEKAKKSLIFEELFLIQAGLLLLKKQHQVKNKGIKFLSNSELVKTVKNNLPFNLTAEQEKVWQEICLDMQKDVQMQRLVQGDVGSGKTVIAILSLVKAIENGYQGALMAPTEILALQHYGKIKELLEPLNIHVGLLTGSLKVKEKRQILEGLADGTIDLVIGTHALIQDNVIFKNLGLVVTDEQHRFGVNQRAKLEGKGEDFLPDVLVMTATPIPRTMTLTVYGDLDVSFIKELPPGRKPIRTFVRMPDRRNLIYKFVKDEVAKGRQAYIVCPLIEESENSDAVSVEMIYDELTSGYLYGLNCALLHGKLKPKEKEDLLQGFLSGKIDVLVSTTVIEVGVNVPNASIMVIEGAERFGLAQLHQLRGRIGRGEYASYCILINRGKNANSLERLHLMEKISDGFVLAEEDLRLRGPGQFFGSMQHGLPDLKIADVLNDVNVLVNARVEVQRAIDYGIDKKVLNEILELQYKHRFLKISDV
>NZ_CP048627.1|WP_008538580.1|665609_666296_+|TVP38/TMEM64-family-protein
MKESTIKIITVLMLVAILVVIYILNPSFYSDFWRVATSGSMQETMDYIASFGIWAMVFSFLLDVLINALGFLPSIFVSTANGLLFGIVPGIILSWLAETTGVIISFILMRTILRSSAEKLIAKSKYLKKADEFSGKNGFKIMLILRAMPYFPSGILTALGAVSRISLKDYALANLIGKFPSTALEVVIGHDVVNYKNNLDRLMIVIVLVCIIYGAIWYYNRRKERKTA

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Crispr_ID: NZ_CP048627_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048627_3

773138-773823

Orphan

Consensus_repeat	Method
AGATTAATAGAAACAAGAGTTGTATTTGAAT	CRISPRCasFinder
GATTAATAGAAACAAGAGTTGTATTTGAAT	PILER-CR
GATTAATAGAAACAAGAGTTGTATTTGAAT	CRT

10 spacers

The CRISPR arrays of NZ_CP048627_3

>merge|NZ_CP048627|3|773138-773823|CRISPRCasFinder,PILER-CR,CRT
GGATTAATAGAAACAAGAGTTGTATTTGAATTGCTCTTCGGAAGTTTCTTTTAATAGCTTTTGCCAGATTAATAGAAACAAGAGTTGTATTTGAATTGTAGCTGGGTTGAACGTGTTGCAGATAATGTATTGATTAATAGAAACAAGAGTTGTATTTGAATTTACTTGGAGATTTAAATGGAACATCATCATAAGAAGATTAATAGAAACAAGAGTTGTATTTGAATTAAAAATCTACGTGTAATTGCCACGCTAGATAATTAAGATTAATAGAAACAAGAGTTGTATTTGAATTTTAACCTCCAATTCTGTTTTACGCATTAACTCAGATTAATAGAAACAAGAGTTGTATTTGAATCCAGTGAAGAAAATTTCACCACCCCATGAAGATATTGATTAATAGAAACAAGAGTTGTATTTGAATAAAAAGGAAAAGATGTCGTTGATAGAAAGGTTGAGATTAATAGAAACAAGAGTTGTATTTGAATATAGTCGTGAATTAAATTCTATCAAACTATAAAAGATTAATAGAAACAAGAGTTGTATTTGAATTAGAAAATGACGATATACTTAATATAGACTTTTACGGAGATTAATAGAAACAAGAGTTGTATTTGAATTCTGTTTTATCCTGACCGCATGGATCGTGATGAAACGATTAATAGAAACAAGAGTTGTATTTATAA

>NZ_CP048627|3|3|773138-773823|CRISPRCasFinder
GGATTAATAGAAACAAGAGTTGTATTTGAAT	TGCTCTTCGGAAGTTTCTTTTAATAGCTTTTGCC
AGATTAATAGAAACAAGAGTTGTATTTGAAT	TGTAGCTGGGTTGAACGTGTTGCAGATAATGTAT
TGATTAATAGAAACAAGAGTTGTATTTGAAT	TTACTTGGAGATTTAAATGGAACATCATCATAAGA
AGATTAATAGAAACAAGAGTTGTATTTGAAT	TAAAAATCTACGTGTAATTGCCACGCTAGATAATTA
AGATTAATAGAAACAAGAGTTGTATTTGAAT	TTTAACCTCCAATTCTGTTTTACGCATTAACTC
AGATTAATAGAAACAAGAGTTGTATTTGAAT	CCAGTGAAGAAAATTTCACCACCCCATGAAGATAT
TGATTAATAGAAACAAGAGTTGTATTTGAAT	AAAAAGGAAAAGATGTCGTTGATAGAAAGGTTG
AGATTAATAGAAACAAGAGTTGTATTTGAAT	ATAGTCGTGAATTAAATTCTATCAAACTATAAA
AGATTAATAGAAACAAGAGTTGTATTTGAAT	TAGAAAATGACGATATACTTAATATAGACTTTTACGG
AGATTAATAGAAACAAGAGTTGTATTTGAAT	TCTGTTTTATCCTGACCGCATGGATCGTGATGAAA
CGATTAATAGAAACAAGAGTTGTATTTATAA

>NZ_CP048627|3|2|773139-773757|PILER-CR
GATTAATAGAAACAAGAGTTGTATTTGAAT	TGCTCTTCGGAAGTTTCTTTTAATAGCTTTTGCCA
GATTAATAGAAACAAGAGTTGTATTTGAAT	TGTAGCTGGGTTGAACGTGTTGCAGATAATGTATT
GATTAATAGAAACAAGAGTTGTATTTGAAT	TTACTTGGAGATTTAAATGGAACATCATCATAAGAA
GATTAATAGAAACAAGAGTTGTATTTGAAT	TAAAAATCTACGTGTAATTGCCACGCTAGATAATTAA
GATTAATAGAAACAAGAGTTGTATTTGAAT	TTTAACCTCCAATTCTGTTTTACGCATTAACTCA
GATTAATAGAAACAAGAGTTGTATTTGAAT	CCAGTGAAGAAAATTTCACCACCCCATGAAGATATT
GATTAATAGAAACAAGAGTTGTATTTGAAT	AAAAAGGAAAAGATGTCGTTGATAGAAAGGTTGA
GATTAATAGAAACAAGAGTTGTATTTGAAT	ATAGTCGTGAATTAAATTCTATCAAACTATAAAA
GATTAATAGAAACAAGAGTTGTATTTGAAT	TAGAAAATGACGATATACTTAATATAGACTTTTACGGA
GATTAATAGAAACAAGAGTTGTATTTGAAT

>NZ_CP048627|3|2|773139-773823|CRT
GATTAATAGAAACAAGAGTTGTATTTGAAT	TGCTCTTCGGAAGTTTCTTTTAATAGCTTTTGCCA
GATTAATAGAAACAAGAGTTGTATTTGAAT	TGTAGCTGGGTTGAACGTGTTGCAGATAATGTATT
GATTAATAGAAACAAGAGTTGTATTTGAAT	TTACTTGGAGATTTAAATGGAACATCATCATAAGAA
GATTAATAGAAACAAGAGTTGTATTTGAAT	TAAAAATCTACGTGTAATTGCCACGCTAGATAATTAA
GATTAATAGAAACAAGAGTTGTATTTGAAT	TTTAACCTCCAATTCTGTTTTACGCATTAACTCA
GATTAATAGAAACAAGAGTTGTATTTGAAT	CCAGTGAAGAAAATTTCACCACCCCATGAAGATATT
GATTAATAGAAACAAGAGTTGTATTTGAAT	AAAAAGGAAAAGATGTCGTTGATAGAAAGGTTGA
GATTAATAGAAACAAGAGTTGTATTTGAAT	ATAGTCGTGAATTAAATTCTATCAAACTATAAAA
GATTAATAGAAACAAGAGTTGTATTTGAAT	TAGAAAATGACGATATACTTAATATAGACTTTTACGGA
GATTAATAGAAACAAGAGTTGTATTTGAAT	TCTGTTTTATCCTGACCGCATGGATCGTGATGAAAC
GATTAATAGAAACAAGAGTTGTATTTATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048627.1\|WP_008538462.1\|774596_774794_+\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NZ_CP048627.1\|WP_008538458.1\|776700_777150_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP048627.1\|WP_117898562.1\|760985_762281_+\|Trk-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|273349
NZ_CP048627.1\|WP_008538472.1\|762294_763155_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226917
NZ_CP048627.1\|WP_008538459.1\|775358_776594_+\|LL-diaminopimelate-aminotransferase	unknown	unknown	gnl\|CDD\|181053
NZ_CP048627.1\|WP_008538463.1\|774055_774610_+\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
NZ_CP048627.1\|WP_008538466.1\|770261_771167_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP048627.1\|WP_008538460.1\|774830_775184_+\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
NZ_CP048627.1\|WP_008538468.1\|766334_768248_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP048627.1\|WP_008538452.1\|782470_782737_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538464.1\|772052_772958_+\|dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235982
NZ_CP048627.1\|WP_008538467.1\|768310_769687_-\|dihydroorotase-family-protein	unknown	unknown	gnl\|CDD\|223122
NZ_CP048627.1\|WP_008538470.1\|764297_765092_-\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_CP048627.1\|WP_008538456.1\|778895_779963_-\|DUF871-domain-containing-protein	unknown	unknown	gnl\|CDD\|377567
NZ_CP048627.1\|WP_008538454.1\|781369_782275_-\|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl\|CDD\|235467
NZ_CP048627.1\|WP_008538455.1\|779967_781356_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|131051
NZ_CP048627.1\|WP_008538457.1\|777725_778859_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341151
NZ_CP048627.1\|WP_008538471.1\|763158_764235_+\|threonine-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|180542
NZ_CP048627.1\|WP_008538465.1\|771288_772053_+\|dihydroorotate-dehydrogenase-electron-transfer-subunit	unknown	unknown	gnl\|CDD\|99814
NZ_CP048627.1\|WP_008538469.1\|765106_765724_-\|DUF1349-domain-containing-protein	unknown	unknown	gnl\|CDD\|377771

Protein	Function_ID	Function_description	E-value
NZ_CP048627.1\|WP_008538462.1\|774596_774794_+\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	2.12353e-21
NZ_CP048627.1\|WP_008538458.1\|776700_777150_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.87523e-12
NZ_CP048627.1\|WP_117898562.1\|760985_762281_+\|Trk-family-potassium-uptake-protein	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	2.54811e-80
NZ_CP048627.1\|WP_008538472.1\|762294_763155_+\|hypothetical-protein	gnl\|CDD\|226917	COG4542, PduX, Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism].	6.40752e-51
NZ_CP048627.1\|WP_008538459.1\|775358_776594_+\|LL-diaminopimelate-aminotransferase	gnl\|CDD\|181053	PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated.	0
NZ_CP048627.1\|WP_008538463.1\|774055_774610_+\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	1.44789e-92
NZ_CP048627.1\|WP_008538466.1\|770261_771167_+\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	9.60126e-19
NZ_CP048627.1\|WP_008538460.1\|774830_775184_+\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	4.61961e-62
NZ_CP048627.1\|WP_008538468.1\|766334_768248_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP048627.1\|WP_008538464.1\|772052_772958_+\|dihydroorotate-dehydrogenase	gnl\|CDD\|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	3.87674e-177
NZ_CP048627.1\|WP_008538467.1\|768310_769687_-\|dihydroorotase-family-protein	gnl\|CDD\|223122	COG0044, PyrC, Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism].	3.65245e-142
NZ_CP048627.1\|WP_008538470.1\|764297_765092_-\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	1.54925e-08
NZ_CP048627.1\|WP_008538456.1\|778895_779963_-\|DUF871-domain-containing-protein	gnl\|CDD\|377567	pfam05913, DUF871, Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.	3.01965e-136
NZ_CP048627.1\|WP_008538454.1\|781369_782275_-\|N-acetylmuramic-acid-6-phosphate-etherase	gnl\|CDD\|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	1.9369e-173
NZ_CP048627.1\|WP_008538455.1\|779967_781356_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	2.84859e-88
NZ_CP048627.1\|WP_008538457.1\|777725_778859_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341151	cd17262, RMtype1_S_Aco12261I-TRD2-CR2, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Aminobacterium colombiense DSM 12261 S subunit (S.Aco12261I) TRD2-CR2 and Moraxella catarrhalis S subunit (S.Mca353ORF290P) TRD2-CR2. Aminobacterium colombiense DSM 12261 S subunit (S.Aco12261I) recognizes 5'... GCANNNNNNTGT ... 3', and Moraxella catarrhalis S subunit (S.Mca353ORF290P) recognizes 5'... CAAGNNNNNNTGT ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	2.55424e-87
NZ_CP048627.1\|WP_008538471.1\|763158_764235_+\|threonine-phosphate-decarboxylase	gnl\|CDD\|180542	PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional.	8.1691e-122
NZ_CP048627.1\|WP_008538465.1\|771288_772053_+\|dihydroorotate-dehydrogenase-electron-transfer-subunit	gnl\|CDD\|99814	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.	3.86231e-112
NZ_CP048627.1\|WP_008538469.1\|765106_765724_-\|DUF1349-domain-containing-protein	gnl\|CDD\|377771	pfam07081, DUF1349, Protein of unknown function (DUF1349). This family consists of several hypothetical bacterial proteins but contains one sequence from Saccharomyces cerevisiae. Members of this family are typically around 200 residues in length. The function of this family is unknown.	5.99901e-80

>NZ_CP048627.1|WP_008538464.1|772052_772958_+|dihydroorotate-dehydrogenase
MNLSVKIGNLELKNPVMGASGTFGFGREYEDFLDVNEIGAIVTKGVTPKPRAGNPGVRIAETPSGMLNCIGLENPGVDAFIYDILPKIKKYNTAVIVNISAGSVEEYAEMAWRLDIDGVDAVEVNISCPNVKEGGIVFGTDPKAAAAVTHAVKTHTKKTVIVKLSPNVTDIVQMAKAVEEAGADAISMINTLTGMAIDINTRKPLLGNITGGLSGPAVKPVALRMVWQVAKAVNIPIIGMGGIASAEDAIEFLLAGATAVAVGAHNFIDPSALKVIADGIAEYMQKHNIEDVNELVGALQA
>NZ_CP048627.1|WP_008538465.1|771288_772053_+|dihydroorotate-dehydrogenase-electron-transfer-subunit
MKKLVVTGTILLNKAVNENVKHMVIKAPEIANLAEPGQFVHVKTLHSENFLRRPFSIADVDKNEGTITLIYRIVGKGTAEYSRLKEGEEFSILGPIGNGFKLKEGRPLLVGGGVGIAPLIYLSRLLKDQKPILLIGGKNKDEVFWEEYLKEYADKIYITTDDGSVGFKGFTIQLMPEILKENNIDAIYTCGPNIMMEGVAKLAYEHDIDCQVSLEKRMACGIGVCLGCTFEGKLTKKRRKVCTEGPVFEAKEVF
>NZ_CP048627.1|WP_008538466.1|770261_771167_+|DMT-family-transporter
MKNKAYVLLSLAGILWGFQPVVVKFIVAEMNPPTLVSFRYLLLSATLFLLMKITHKKDFIPPKSCWLPLIIMGITGVSLNNGSQFTGLQYSTVANATLIAAMTPAVTSLLAFVFLRERLALLQWIGIIISISGTLYLISNGNLDIILHISFNLGDILFFVAQLSWAIYCLISIRVMKKMSVLSVTAWAGVFGAIFIAIYGHFTCGLFIPDLSMKAMASFAYIVWLGGVGAMIFWNIGVKNVGASTASIFLNIMPIVGIVTASITLNEIITMEECLGAVVILLGVYITTHTKQILEKLNWKK
>NZ_CP048627.1|WP_008538467.1|768310_769687_-|dihydroorotase-family-protein
MYDLALKNGFIVNENEIYLGNIYIQDEKIVEISLADKPANEVYDVSGKYLLPGCIDTHCHFRDPGATAKEDFTTGTQAAIASGVTTVFDMPNTNPSVLNEQDLLQKANYFAPKAFADYGIWGLSLGEINLGDLPRLCETGASAVKFFWGYAINAKTKALIYNYNPKDEDIIPPLGDGEVYEIFEQMAKTGKIIAIHAENIELIQTLTKRLQQSGKKDYEALIQSRPALAEALTIQTASLLAKATGARLHILHLTSKMGMEAVAQAKANGVNITAETCPQYLFLSAKDYDSVGPMMKVYPVIKHEEDRLALWQGLKNGTIDFIASDHAPHIISEKQGDLFSIPAGMCGVETMLPLMLNEVNNGHITLPFLVKVMAKNVADIYNLPNKGNLEIGKDADIVVVDMNKVDTIENEKLHSKQPLTAFAGRKIKGWPIKTFLRGQLVVDNNKICQDKACGKWIK
>NZ_CP048627.1|WP_008538468.1|766334_768248_+|threonine--tRNA-ligase
MANITLKDGAVREVAEGTTVLDFVKSFSNSLAKKALACKIDGETKDLMTVIDGDHQVEILTFEDEDGRWALRHSASHILAQAVKRLYGDKNVKLAIGPAIDNGFYYDFDMDHQLSTEDLAKIEKEMKKIVKENLAIVRKEVTRQEALDFFNAEGESYKVELINDLPEDAMITMYSQGEFTDLCAGPHVVSTGKVKAIKLQSVAGAYWRGSEKNKMLQRVYGTAFEKQADLDAYLKMLEEAAKRDHRKLGKELDLFSLHEEGPGFPFFHPNGMVIRNELINYWREVHRQFGYQEIKTPMIMNRKLWETSGHWDHYKENMYFTKIDGEDYAIKPMNCPGGMLVYLTQQHSYRDLPLRLGELGLVHRHELSGALHGLMRVRNFTQDDAHIFMLPSQIEDEIQRVIDLFDKVYSTFGLTYHAELSTRPEDSMGSDEVWETATNALRNALEHRGLKYVINEGDGAFYGPKIDFHLTDSIGRTWQCGTIQLDMLMPEKFDLTYIGEDGQKHRPVMIHRVVYGSIERFIGILIENYAGAFPVWLAPVQVKILPISDKYVDYAYEIKRKMFDLGIRVEVDDRNEKIGYKIREAQVKKVPYSIIVGESELENKNISVRKRREKDTVTMDTDEFINNLLEEIKTKAQ
>NZ_CP048627.1|WP_008538469.1|765106_765724_-|DUF1349-domain-containing-protein
MFFDVDKLHWTRKPLSFNITKDKIEIITSPHTDLWQRTYYHFRNDNAPVLQMSTSEEFFSFTVKTDFDSKVRFDQCGIVLYLDSENWLKASVEYENEDIQHLGSVVTNKGYSDWATTVINSSIKSIWYRLSRRKDDFRIEYSLNGINYNQMRICHLWEASGDIQFGIYACSPENSSFKATFTDFKMTECVWQAHDGQQPDEDITY
>NZ_CP048627.1|WP_008538470.1|764297_765092_-|YdcF-family-protein
MNTLIAKNLNILIDFLAKRDLTALSPDELQAKYKINQADLLILFGGSIPEGTDVFAKAHQQNIAKNYLLVGGAGHTTEALRQKMQSSLADIDISTKSEAEIFALYLKNKYNITDCLLETKSTNCGNNITNALELLKNLDLKPKSIIFMQDATMQNRMDAGFRKYCPCDTTLINYATYKVHFTVQNDKLCLEQNNIWQMWNIDKYIELLMGEIPRLTDNINGYGPQGKDFIAHVDIPQEVHSAYQYLYQHLNIKTRQANSLYATK
>NZ_CP048627.1|WP_008538471.1|763158_764235_+|threonine-phosphate-decarboxylase
MQKFEHGGDLKKIMAQENLDKIIDFSANINPYGLSKNIKKAIVDHIDDIIHYPEPDARELCGKIAENYGISADKIIVGNGAVELLYILCHILKPKNALIVSPGFSEYERAAKASGANINYVMLSEKQEFNSPMRDLIVNIKGNDILFIGNPNNPTGTLFTVEDMELLIEHAENNGCFVVVDESFMDFIKTSEAFSVLPLVEKYHNLFVLHSLTKFYALPGLRLGFAATDHEVLDPLYQAKDPWNVNALAQIAGMVALEDKVYQRRSRTYTRTEINYLYEELETFDKLKVYEPTVNFILVNIEKTKMTANELKAKLLSYGIAIRNCENYPGLNEYFVRFAVRTREENDELIDALTEILA
>NZ_CP048627.1|WP_008538472.1|762294_763155_+|hypothetical-protein
MGLSVKIPGSCGELVQGMIDDIPFLVTCPISMYTKASITKYFSYLPYKARLARNKTLDYLGTKSYAKFCLTTELLTGKGMASSSADIASICQLTALSCKRILSQDEISKIATSIEPTDGIFCKGIVRYNHLNGQALEHLGLAPKIKILMFDCGGKVDTLSFNRRKNLKRLYQENENTIKEALDYLRLGFKEKNNRYIGKACVMSAYANQKILYKKQLEDIMIISEDYQAIGVNVAHSGTVIGVLFDDNCEESLIEECKQKILSECFDLHYLNLVKMISGGIIIERE
>NZ_CP048627.1|WP_117898562.1|760985_762281_+|Trk-family-potassium-uptake-protein
MVLCSYGIIILTGTMLLMLPITVVDIEPLSFVDALFMSASAVCVSGVSIFSLGDNFSVFGQIIIIILVQIGALGIMTITTILAVVMGKRIQLRDRLLIQESLQRWSVAGVVRLVISIVKMTVAFEFIGGVILTIIFCQDYSVGTAIYFGFWHSVSAFCNAGFDILGGSNFADYIFHPFFNLILLIEVICGGLGFAVLLDIYQKRKWQKLSINSKLVLVTTGFLILIGSVFIFILEYGNQNTLGDLGLFDKVMVSTFMASMARTSGFSMLDIGSLTEPSLLLIMFLMFIGGSPASTGGGIKTTTIAVIFAAIWSLIRGREDVVIFERTVPPIVIFRAMSIFFVSAIVVFLMSMFLCLTEDIALSKILFESVSMFATVGLPTGTINEMDASSRIVIIFVMLMGRIGIISFAMALVIRKKKNKIRYPEDKFIIG
>NZ_CP048627.1|WP_008538463.1|774055_774610_+|translation-initiation-factor-IF-3
MFSISKETLRINGEIRAREVRVTDAQGEQLGIMSTRDALRKAEEAHLDLVEVAPKAKPPVCRIMDFGKYRYEQQKREKEAKKKQKVISVKEVKLRPGIETHDFNFKVKNAMRFIAEGNKVKATIMFRGRELSHPEMGKELLLKVAEAMQDAVTVEREPKLEGKNMIMILAPKVQTKGGNTNAKN
>NZ_CP048627.1|WP_008538462.1|774596_774794_+|50S-ribosomal-protein-L35
MPKIKTRRAAAKRFTATGSGEFKRNKAFKSHILEKKSPKRKRNLRKAAIITAADHKRVSKMLPYA
>NZ_CP048627.1|WP_008538460.1|774830_775184_+|50S-ribosomal-protein-L20
MPRVKSGVTAHARHKKILKLAKGYRGARSKQFKKANELVMKALYYARRDRRAKKGEFRKLWIARINAATRANGMSYSRFICGLTKAGVQVNRKMLADVAINDAAAFAKLVEVAKSNL
>NZ_CP048627.1|WP_008538459.1|775358_776594_+|LL-diaminopimelate-aminotransferase
MALVNENYLKLQGSYLFAEIAHRVQKFKAENPEAEVISLGIGDVTLPLPQVSIEAMHKAVDEMANKETFRGYGPEQGYAFLREKIRDVIYKSRGVDIETDEIFVSDGAKSDCGNIQEIFGVDNTIAITDPVYPVYLDTNIMAGRTGLVKEDGTFEGVVYMPCTAENNFTPELPKQHVDMIYLCSPNNPTGTTLSRDELAKWVKYAKENKSIILYDAAYSYYITEEDVPHTIYEIEGAKEVAIEFRSFSKTAGFTGTRCGYIVLPKAVKGYTKDGKEQALNPLWNRRHTTKFNGTPYIIQRGAEAVLTEEGQKQVKEMVGYYMENAKIIREGLASLGLTVFGGVNSPYVWLKVPAGMTSWDFFDKLLHEANIVGTPGSGFGPSGENYFRLTAFGSRENTLKAVERIKTQLKL
>NZ_CP048627.1|WP_008538458.1|776700_777150_+|GNAT-family-N-acetyltransferase
MEIKEVKDNKKQFLSLLLLADEQENMIDKYIDRGIMYVLDDEGIIKAECIITDEQNGVLEIKNLAVKPEYQRKGYGKVMIDFIIKNYKEKYSILQVGTGDSTLTIPFYEQCGFIRSHYIKNFFIDNYEQPIYEDGIQLIDMIYLQRKLK
>NZ_CP048627.1|WP_008538457.1|777725_778859_-|restriction-endonuclease-subunit-S
MNIPKLRFKDNNGNDYPQWEKKKLGDIVQFLDNKRKPLEQSERIHGKYPYYGASGIIDYINNYIFDEELVLLSEDGANIIDRNYPICYIATGKYWVNNHAHVLKTKSQYLNKFLCEALERLNYNKYNTGTAQPKLNQDICKNILLNIPILHEQEKIANFFSTIDKKIKNLANTITSLENQKKGLLQQIFSQKLRFKDKNGNNYPNWKKKKLGDLFTIKAGGDINKENFSEQYSIEFKYPVYANALTNNGLYGYSNIYKIDKPSITVTGRGINVGFALSREPFYYPIVRLLVLIPNININFTFFTESINFIHIFNESTGVPQLTAPQLSKVNVYVPNIEEQNKIGNLFDKLNEKIDNKKAQLEHWQQIKKGLLQQMFV
>NZ_CP048627.1|WP_008538456.1|778895_779963_-|DUF871-domain-containing-protein
MQNGISIYLGLDNTLEENLNLIHLAHKYNLNRIFTSFHIPETDISHFQQDLQTILKLTQKYNMEVICDVSPNTLALLNLDTLNIQELATLGITTLRLDFGYSAEQIAKLSHQNIKLQFNASTITQEFLDELNHYQTDFQHIDALHNFYPREGTGLNVKKLQQQNELLHKYNISVGAFIPSYNKARSPIKKGLPTLEIHRYQTASLAMRHLKLLGIDSIFIGDSLPTEDEIQELANLTDEYILLKAKKLTQNKDILKTLQQNTFTARLDEADGAIRTQESRALFKQIYICPEYIVPREIGSITLDNALYARYAGEMQIITHAQKKDNKINTIAKLLDSELILLPYIQPNSKFKIKV
>NZ_CP048627.1|WP_008538455.1|779967_781356_-|PTS-transporter-subunit-EIIC
MNLQQTAFAIYELMKSFSILKITNCMTRLRLQLNTEDIANLPLKELKNIPNVLGVNLNDNELQIILGPGKVNEVTSEFKKLYANKNLETNAQNTNQDTNNNQKQFGNAEELHQQIRKKNATPFKLLLKRISNIFMPLIPAFIACGLITGLLNIAFKIDPTLTNYPAIQVLQIAGNAVFFGLNIFVGINTAKEFHASPMLGGTMAAIITHPMLNNISLFNIDLLAGRGGIVAVLLVVAFSSWLENKLHKIVPKILDLFLTPLLVILIATFPALFILQPIGGIIAETIGVLVTSAINSGGAITGFIIGGIFLPLVMTGLHQGLTPIHAELLNQYGVTILLPILAMAGAGQVGASIAVYLKTKNQKLKQTIASALPVGFMGIGEPLIYGVTLPLGKPFISACIGGAFGGAVQAFFHVGATSIGLSGLPLTASTDKMLCYLIGLFTAYIFGFIATLIIGFNDPIEE
>NZ_CP048627.1|WP_008538454.1|781369_782275_-|N-acetylmuramic-acid-6-phosphate-etherase
MINLNNLLTEKRNPYTLNIDNVSTLEMCMLLNEEDKRVAIAIRNVLPQIAMAVDEITSRLKDGGRLFYIGAGTSGRLGILDAVECPPTYSTDPEMVQGIIAGGYNAIFKAQEGAEDSLTLAQEDLQAKNLSAKDCVVGIAASGRTPYVIGGLDFANSINALTIAISCTSNSEISSHAKIAIEALTGPEAITGSTRMKAGTAQKMILNMLSTCTMIKLGKVYSNLMVDVKSSNKKLEERARRILMEATNCDRQTAIDTLAITQGKVKPAILMLLANISYEEALSSLNNNEGFISKSLNSMKK
>NZ_CP048627.1|WP_008538452.1|782470_782737_+|hypothetical-protein
MLKLIKGRLKNFIGIIALACFLCSPVSYAVQLSTVSAAPRHEERHDPPPPPPKHDRHDKDDDNDYDKGDITTAVLIGGVIGAVIAKNT

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Crispr_ID: NZ_CP048627_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048627_4

957732-958818

Orphan

Consensus_repeat	Method
ATTTAACTTTAACAAGTGTTGTATTTGAAT	PILER-CR
ATTCAAATACAACACTTGTTAAAGTTAAAT	CRISPRCasFinder
ATTCAAATACAACACTTGTTAAAGTTAAAT	CRT

16 spacers

The CRISPR arrays of NZ_CP048627_4

>merge|NZ_CP048627|4|957732-958818|PILER-CR,CRISPRCasFinder,CRT
ATTTAGATACAACACTTGTTAAAGTTAAATTAGAACTATCCGTGAAATACAAGTTTATTATATGGAATTCAAATATAACACTTGTTAAAGTTAAATTTTATAATAGAAAAGGATTGATTTTCATAAAAGTCATTCAAATACAACACTTGTTAAAGTTAAATGACACTGAAAAATCAAATTTTGTAAAAGTATTTAAATTCAAATACAACACTTGTTAAAGTTAAATTAAGGGTATCGAAAGCTTTATTATGACGCAATGTCAATTCAAATACAACACTTGTTAAAGTTAAATGATGTGGATTTATTAGAAATAGTTGATTTTCTAAAATTCAAATACAACACTTGTTAAAGTTAAATGAAGAAAGAACCAAGCTATATAAACCACTTTCACATTCAAATACAACACTTGTTAAAGTTAAATTTGGGTGATTGCTATGGTCGTGAACGTGTAGACTACAATTCAAATACAACACTTGTTAAAGTTAAATATTGGGTAGATGATAGTCAAGGCATAAACATATTATTATTCAAATACAACACTTGTTAAAGTTAAATAATTATAACGCTAGTTAAAACACAAGTTGTATGGCGGATTCAAATACAACACTTGTTAAAGTTAAATACACAAGGCGCTATAGCGTCATAGATTACTGACCCTATTCAAATACAACACTTGTTAAAGTTAAATAACGACTGCCTTTTTGTGCGTTCTGATAAAATTTGATTCAAATACAACACTTGTTAAAGTTAAATATTACAAAAAAGAATGAATACATCTTATTTTAATGCATTCAAATACAACACTTGTTAAAGTTAAATGCTTCCGCAAGCGTCTGGTTTATGTCTTTGCTTTCTGATTCAAATACAACACTTGTTAAAGTTAAATTCATTTTTATTATAAAGATGGAGAACACAAATGGTTATTCAAATACAACACTTGTTAAAGTTAAATAGAGCTACTAAATATTTAAAAAAGGTGGTAATAACTAATTCAAATACAACACTTGTTAAAGTTAAATAGAAATTCTAATATATATTTATCTTCTTGTTTTCTTATATTCAAATACAACACTTGTTAAAGTTAAAT

>NZ_CP048627|4|3|957732-958818|PILER-CR
ATTTAGATACAACACTTGTTAAAGTTAAAT	TAGAACTATCCGTGAAATACAAGTTTATTATATGGA
ATTCAAATATAACACTTGTTAAAGTTAAAT	TTTATAATAGAAAAGGATTGATTTTCATAAAAGTC
ATTCAAATACAACACTTGTTAAAGTTAAAT	GACACTGAAAAATCAAATTTTGTAAAAGTATTTAA
ATTCAAATACAACACTTGTTAAAGTTAAAT	TAAGGGTATCGAAAGCTTTATTATGACGCAATGTCA
ATTCAAATACAACACTTGTTAAAGTTAAAT	GATGTGGATTTATTAGAAATAGTTGATTTTCTAAA
ATTCAAATACAACACTTGTTAAAGTTAAAT	GAAGAAAGAACCAAGCTATATAAACCACTTTCAC
ATTCAAATACAACACTTGTTAAAGTTAAAT	TTGGGTGATTGCTATGGTCGTGAACGTGTAGACTACA
ATTCAAATACAACACTTGTTAAAGTTAAAT	ATTGGGTAGATGATAGTCAAGGCATAAACATATTATT
ATTCAAATACAACACTTGTTAAAGTTAAAT	AATTATAACGCTAGTTAAAACACAAGTTGTATGGCGG
ATTCAAATACAACACTTGTTAAAGTTAAAT	ACACAAGGCGCTATAGCGTCATAGATTACTGACCCT
ATTCAAATACAACACTTGTTAAAGTTAAAT	AACGACTGCCTTTTTGTGCGTTCTGATAAAATTTG
ATTCAAATACAACACTTGTTAAAGTTAAAT	ATTACAAAAAAGAATGAATACATCTTATTTTAATGC
ATTCAAATACAACACTTGTTAAAGTTAAAT	GCTTCCGCAAGCGTCTGGTTTATGTCTTTGCTTTCTG
ATTCAAATACAACACTTGTTAAAGTTAAAT	TCATTTTTATTATAAAGATGGAGAACACAAATGGTT
ATTCAAATACAACACTTGTTAAAGTTAAAT	AGAGCTACTAAATATTTAAAAAAGGTGGTAATAACTA
ATTCAAATACAACACTTGTTAAAGTTAAAT	AGAAATTCTAATATATATTTATCTTCTTGTTTTCTTAT
ATTCAAATACAACACTTGTTAAAGTTAAAT

>NZ_CP048627|4|4|957732-958818|CRISPRCasFinder
ATTTAGATACAACACTTGTTAAAGTTAAAT	TAGAACTATCCGTGAAATACAAGTTTATTATATGGA
ATTCAAATATAACACTTGTTAAAGTTAAAT	TTTATAATAGAAAAGGATTGATTTTCATAAAAGTC
ATTCAAATACAACACTTGTTAAAGTTAAAT	GACACTGAAAAATCAAATTTTGTAAAAGTATTTAA
ATTCAAATACAACACTTGTTAAAGTTAAAT	TAAGGGTATCGAAAGCTTTATTATGACGCAATGTCA
ATTCAAATACAACACTTGTTAAAGTTAAAT	GATGTGGATTTATTAGAAATAGTTGATTTTCTAAA
ATTCAAATACAACACTTGTTAAAGTTAAAT	GAAGAAAGAACCAAGCTATATAAACCACTTTCAC
ATTCAAATACAACACTTGTTAAAGTTAAAT	TTGGGTGATTGCTATGGTCGTGAACGTGTAGACTACA
ATTCAAATACAACACTTGTTAAAGTTAAAT	ATTGGGTAGATGATAGTCAAGGCATAAACATATTATT
ATTCAAATACAACACTTGTTAAAGTTAAAT	AATTATAACGCTAGTTAAAACACAAGTTGTATGGCGG
ATTCAAATACAACACTTGTTAAAGTTAAAT	ACACAAGGCGCTATAGCGTCATAGATTACTGACCCT
ATTCAAATACAACACTTGTTAAAGTTAAAT	AACGACTGCCTTTTTGTGCGTTCTGATAAAATTTG
ATTCAAATACAACACTTGTTAAAGTTAAAT	ATTACAAAAAAGAATGAATACATCTTATTTTAATGC
ATTCAAATACAACACTTGTTAAAGTTAAAT	GCTTCCGCAAGCGTCTGGTTTATGTCTTTGCTTTCTG
ATTCAAATACAACACTTGTTAAAGTTAAAT	TCATTTTTATTATAAAGATGGAGAACACAAATGGTT
ATTCAAATACAACACTTGTTAAAGTTAAAT	AGAGCTACTAAATATTTAAAAAAGGTGGTAATAACTA
ATTCAAATACAACACTTGTTAAAGTTAAAT	AGAAATTCTAATATATATTTATCTTCTTGTTTTCTTAT
ATTCAAATACAACACTTGTTAAAGTTAAAT

>NZ_CP048627|4|3|957732-958818|CRT
ATTTAGATACAACACTTGTTAAAGTTAAAT	TAGAACTATCCGTGAAATACAAGTTTATTATATGGA
ATTCAAATATAACACTTGTTAAAGTTAAAT	TTTATAATAGAAAAGGATTGATTTTCATAAAAGTC
ATTCAAATACAACACTTGTTAAAGTTAAAT	GACACTGAAAAATCAAATTTTGTAAAAGTATTTAA
ATTCAAATACAACACTTGTTAAAGTTAAAT	TAAGGGTATCGAAAGCTTTATTATGACGCAATGTCA
ATTCAAATACAACACTTGTTAAAGTTAAAT	GATGTGGATTTATTAGAAATAGTTGATTTTCTAAA
ATTCAAATACAACACTTGTTAAAGTTAAAT	GAAGAAAGAACCAAGCTATATAAACCACTTTCAC
ATTCAAATACAACACTTGTTAAAGTTAAAT	TTGGGTGATTGCTATGGTCGTGAACGTGTAGACTACA
ATTCAAATACAACACTTGTTAAAGTTAAAT	ATTGGGTAGATGATAGTCAAGGCATAAACATATTATT
ATTCAAATACAACACTTGTTAAAGTTAAAT	AATTATAACGCTAGTTAAAACACAAGTTGTATGGCGG
ATTCAAATACAACACTTGTTAAAGTTAAAT	ACACAAGGCGCTATAGCGTCATAGATTACTGACCCT
ATTCAAATACAACACTTGTTAAAGTTAAAT	AACGACTGCCTTTTTGTGCGTTCTGATAAAATTTG
ATTCAAATACAACACTTGTTAAAGTTAAAT	ATTACAAAAAAGAATGAATACATCTTATTTTAATGC
ATTCAAATACAACACTTGTTAAAGTTAAAT	GCTTCCGCAAGCGTCTGGTTTATGTCTTTGCTTTCTG
ATTCAAATACAACACTTGTTAAAGTTAAAT	TCATTTTTATTATAAAGATGGAGAACACAAATGGTT
ATTCAAATACAACACTTGTTAAAGTTAAAT	AGAGCTACTAAATATTTAAAAAAGGTGGTAATAACTA
ATTCAAATACAACACTTGTTAAAGTTAAAT	AGAAATTCTAATATATATTTATCTTCTTGTTTTCTTAT
ATTCAAATACAACACTTGTTAAAGTTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048627.1\|WP_008538279.1\|955664_955895_+\|KH-domain-containing-protein	unknown	unknown	gnl\|CDD\|179040
NZ_CP048627.1\|WP_008538278.1\|956025_956433_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378550
NZ_CP048627.1\|WP_008538270.1\|961121_961364_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP048627.1\|WP_008538269.1\|961408_962506_-\|SAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|366887
NZ_CP048627.1\|WP_008538265.1\|963595_964624_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_039881331.1\|956404_956926_+\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP048627.1\|WP_008538275.1\|956928_957669_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP048627.1\|WP_008538264.1\|964626_964923_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP048627.1\|WP_008538271.1\|960763_961117_+\|DUF2442-domain-containing-protein	unknown	unknown	gnl\|CDD\|378424
NZ_CP048627.1\|WP_008538285.1\|948892_949660_+\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_CP048627.1\|WP_008538267.1\|963135_963333_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350
NZ_CP048627.1\|WP_008538273.1\|959256_960363_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP048627.1\|WP_163604675.1\|962560_963010_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP048627.1\|WP_008538280.1\|955373_955649_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|234588
NZ_CP048627.1\|WP_008538266.1\|963422_963575_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008538281.1\|953962_955330_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP048627.1\|WP_008538284.1\|949699_951523_+\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_CP048627.1\|WP_008538283.1\|952027_953476_+\|sodium:solute-symporter-family-protein	unknown	unknown	gnl\|CDD\|271357
NZ_CP048627.1\|WP_008538282.1\|953603_953960_+\|YlxM-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP048627.1\|WP_008538272.1\|960468_960729_+\|DUF4160-domain-containing-protein	unknown	unknown	gnl\|CDD\|379344

Protein	Function_ID	Function_description	E-value
NZ_CP048627.1\|WP_008538279.1\|955664_955895_+\|KH-domain-containing-protein	gnl\|CDD\|179040	PRK00468, PRK00468, KH domain-containing protein.	1.41096e-25
NZ_CP048627.1\|WP_008538278.1\|956025_956433_+\|hypothetical-protein	gnl\|CDD\|378550	pfam11068, YlqD, YlqD protein. The structure of a representative of this family has been solved (Structure 4dci) and found to form a tetrameric structure of prefoldin-like architecture with the beta-barrel core and helical coiled coil tentacles. This suggests that this family may act as molecular chaperones.	1.01054e-24
NZ_CP048627.1\|WP_008538270.1\|961121_961364_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	9.86954e-11
NZ_CP048627.1\|WP_008538269.1\|961408_962506_-\|SAP-domain-containing-protein	gnl\|CDD\|366887	pfam02037, SAP, SAP domain. The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.	8.38269e-05
NZ_CP048627.1\|WP_039881331.1\|956404_956926_+\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	3.38083e-57
NZ_CP048627.1\|WP_008538275.1\|956928_957669_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	4.65219e-163
NZ_CP048627.1\|WP_008538271.1\|960763_961117_+\|DUF2442-domain-containing-protein	gnl\|CDD\|378424	pfam10387, DUF2442, Protein of unknown function (DUF2442). This family of bacterial and fungal proteins has several members annotated as being putative molybdopterin-guanine dinucleotide biosynthesis protein A; however this could not be verified. Hence the function is not known. This family also includes the DUF3532 that was found to be related and was merged into this family. Members of this family also fall into the NE0471 N-terminal domain-like superfamily, a family of proteins with a unique fold in SCOP:143880.	0.00574009
NZ_CP048627.1\|WP_008538285.1\|948892_949660_+\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	8.0865e-34
NZ_CP048627.1\|WP_008538267.1\|963135_963333_+\|transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	0.00736928
NZ_CP048627.1\|WP_008538273.1\|959256_960363_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	6.82325e-38
NZ_CP048627.1\|WP_163604675.1\|962560_963010_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.57279e-08
NZ_CP048627.1\|WP_008538280.1\|955373_955649_+\|30S-ribosomal-protein-S16	gnl\|CDD\|234588	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed.	1.5046e-40
NZ_CP048627.1\|WP_008538264.1\|964626_964923_+\|hypothetical-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	0.003054
NZ_CP048627.1\|WP_008538281.1\|953962_955330_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP048627.1\|WP_008538284.1\|949699_951523_+\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_CP048627.1\|WP_008538283.1\|952027_953476_+\|sodium:solute-symporter-family-protein	gnl\|CDD\|271357	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain. This family represents the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporter family or solute sodium symporter family) that co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. Family members include: the human glucose (SGLT1, 2, 4, 5), chiro-inositol (SGLT5), myo-inositol (SMIT), choline (CHT), iodide (NIS), multivitamin (SMVT), and monocarboxylate (SMCT) cotransporters, as well as Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). One member of this family, human SGLT3, has been characterized as a glucose sensor and not a transporter. Members of this family are important in human physiology and disease.	9.7226e-82
NZ_CP048627.1\|WP_008538282.1\|953603_953960_+\|YlxM-family-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	1.31783e-28
NZ_CP048627.1\|WP_008538272.1\|960468_960729_+\|DUF4160-domain-containing-protein	gnl\|CDD\|379344	pfam13711, DUF4160, Domain of unknown function (DUF4160).	9.34315e-22

>NZ_CP048627.1|WP_008538275.1|956928_957669_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRIDILSLFPEMFGGVFGCSITKRAIEKNILDIQITNPRDFAFNKHNQVDDTAYGGGAGMVMKPEPLFRAVEDVKSKTQIENSKVILMCPTGKVFTQEKAKELANFDQLIFICGHYEGFDNRVVQNLADEVISIGDYVLTGGELPAMVVIDAVSRMLPGVLGSGESAPTDSFYNGLLEYPQYTKPREYRGLSVPDVLLSGDHAKIAKWRRQESLRVTYTNRPDLLEKVELSKDDKKFLEELKNNSK
>NZ_CP048627.1|WP_039881331.1|956404_956926_+|16S-rRNA-processing-protein-RimM
MKKSLKSVTNKKIIIGKIGAAHGVRGDMKVYPLTDFPDRFNTIKKAYVDDKEINIISTRYQGNFVVMKVEGVNSREEVARFTNKLLKINRSDVPPLEDGEYYAFDIIGLQVINQDDVVLGKITEILKTGSNDVYITKAKDGRQILIPALKKVVTEINVEDGFMKVIWDENQEV
>NZ_CP048627.1|WP_008538278.1|956025_956433_+|hypothetical-protein
MESISLQCPVTIKVKVTEKFRAKMLDKMEKQLAEVDLKLSKIDIQKKKFLEEHAEDNIQQVGAIVQKMEVDKAKGLKLKAKIEQDIADMKHLGLGAEIIQGTMQHVFNVKVGDKMPAVMNTEIIVEDEKIIEIRN
>NZ_CP048627.1|WP_008538279.1|955664_955895_+|KH-domain-containing-protein
MKELVEVIAKSLVDYPEQVTVDEIVDGNHVLLKLRVASADMGKVIGKQGRIAKAMRTVVKAAASCENKKVTVDIIE
>NZ_CP048627.1|WP_008538280.1|955373_955649_+|30S-ribosomal-protein-S16
MAVKIRLNRMGAKKRPFYRIVVADSRAPRDGRFIEILGNYDSTKEPAIINIDEEKTLDWMLKGAQPTDTVKSLLSKKGIMTKFDAAKHAKK
>NZ_CP048627.1|WP_008538281.1|953962_955330_+|signal-recognition-particle-protein
MIFENLADRLQETFKKLRGHGKLTADDVNATMREIRIALLEADVNFKVVKDFIKKIKERAVGQEVLESLTPAQAVIKIVNEELTALMGQTQSHINISPKAPTIIMMVGLQGAGKTTSAGKLGLMFKKQGKHPLMVAADIYRPAAIKQLQVLGSQIDIPVFAKEDCKDAVRIANEAIDYAKSHANDIVIIDTAGRLHIDENLMQELKSIKEDVKPHEILLVVDAMTGQDAVNVAESFNNDLGLDGVILTKMDGDARGGAALSVKAVTGCPIKFVGAGEKLEALEPFYPDRMASRILGMGDVLTLIEKAQTAFDAEEAKKMEKAFRKNEFTLDDFLSQLNQVRKLGSFENILGMIPGMGGLKKKLGDVDIDMNGKEIKHIEAIIRAMTPEEKRNTKIINGSRRKRIAMGSGTKVQEVNKLLKQFDEMKKMMKKMSNMKQLNKKGKKGKGGFKLPFFR
>NZ_CP048627.1|WP_008538282.1|953603_953960_+|YlxM-family-DNA-binding-protein
MLEKFLHMSALFDIYGALLTDKQKRCLQMHLFEDFSLSEISTELGISRQAVYDMLRRSEQIMQQYEDKLGLAARSTKEKTELLSILSDLLALKQESEDNRLNNIIRRISVLTNDSKEA
>NZ_CP048627.1|WP_008538283.1|952027_953476_+|sodium:solute-symporter-family-protein
MSIQLMIVCLYVVLLFAISFYVKHRANKNPMEYLFAGRKLSTSLIAFNVTGLAVGAASTVGVAENATQVGIAAGWYNGAWAIGAVVMGILAAGKYRQMGCSTIPELFERYYDKKGRLISAIGLAIILICITSLQYVAGGAILSTLMPDIFSMKTGMIMSAIVFIGITVVGGLWSSGMSNMISVSLIYLGILYSTISVVDNNGGLVNINNNLPVVDFSWFSPIGGLGLAVVLGWILIMISQALTLQGTVQIACGAKDAKTAKKGFILGGALIFPIGFLSAILGLAAKVQYPDINPTMALPQIIMSLDPVVSGITLAALWAADVSTACTILLGAGTLISQDIYKRFINPQVTTAKFLQVNRLVILLVGLATLWLAFNAVGILKTMMIGLSLTTAFTVVFLFTVFAPSLCRKNSAFYTTVVGLIGLVLWQFVPQIHVLPHVIYFEWIICIISFLIISVVDKQPIKIVEKETTSAKVMVNQEVLSR
>NZ_CP048627.1|WP_008538284.1|949699_951523_+|excinuclease-ABC-subunit-UvrC
MMINEVLQEKLKLLPTKSGVYLMKNKQKQIIYVGKAINLKNRVRQYFQSSRNHSAKTIAMVSHIEDFETIVTDNELEALILECNLIKKHHPKYNIMLRDDKTYPYLKITLNEKYPRIVTTRRLIKDGSRYFGPYTSSTAMKETLNLLRKLFPLRTCKHLADRPCLEYHIKRCLAPCANYIDEDTYKEMVDGVCLFLEGKSEVVEQNLAKKMQMAAQNLDFEKAARLRDQLLAVRKIMEKQKILLDDGDIDAIGIARANYGICIEIFFIRNGKMLGRNQFLLNDEDDDEKNLITAFLKQYYNDAVDIPKEILIPEEIAEIELLQEWLWTEKKKKTKILLPKRGVKKDILMMAKENAEKYLLEQEQKLKDMKARSLGAVYDLQKYLNLPKPPMRMECFDISHIQGSETVASMVVFQDGKPDKNSYRRFKINSTEGKPDDFMSMREVTTRRYVGIDKSDLPDLIIIDGGKGQLSSALEIIRGAGHYSVPVVGLAKQFEYIFTEQSSEPVILPRQSDALYLVQSIRDEAHRFAITYHRKLRTKRNKISILDNISGIGAKRRKSLFDHFETIQNIKKASVDELMAVPGISEQIAKSIYNFFRTHELVSSKLK
>NZ_CP048627.1|WP_008538285.1|948892_949660_+|YdcF-family-protein
MLYLVKIFYAFIIPPGGIISLLILFNIYLYWKKIKGKYILSMITLLFYLLSTNFIAYHLVKPLENFYQNKTIEQLKQDKNDVIIMLGGGAINVADIDGEGQVSGYVANRMITVMRLQKELDIPIILSGGKVFEDTGREADIEKRIFEGMGVNSQALILENQSRNTVENVQNSKVIMEEYNFTKPLVITSGFHLLRAMEIFAREGIEATPYVADYQMSDELVFSIFNFLPNNGSLNTSCMAIREYLGILALKLKMQ
>NZ_CP048627.1|WP_008538273.1|959256_960363_-|site-specific-integrase
MKKRKDGRYQSSVMLTDPLTNEKRRVYVYGYTEEEVQRELNRVKLDNGKEILMPTFKEWADEWLKIKSDDVSPTTINSYKDSLRLHISPTLDKYKLKDITPSLVRTVLRNIPTQRTKEYCYIIINAILQQALREDLINKNPCINVKKPKAKAREATIISEDEFKQLINATSNLQLKAILWIAYDTGMRRSEIAALRWQDIDFKTNTMHIHHAIKTNRHAPLSSRFSLGEPKTDYGIRDIPLTNIVKSVLNKHREQQKELFKNNSRILTNKDFVFTSNFRGRFGDFIQPDNITHEFVKLKRKAGIKSDITFKSFRHTCLTSLAEANIPAKAIQAQAGHANASFTLNRYVHKTEQMKQTIADFLNNRVQK
>NZ_CP048627.1|WP_008538272.1|960468_960729_+|DUF4160-domain-containing-protein
MPTICMFRGIKIFINWREHRPPHFHATYGGDEVIILINELEVLEGAIPSKQLKMLLGWAAFHQEELKENWELAEKNQELFSIEPLK
>NZ_CP048627.1|WP_008538271.1|960763_961117_+|DUF2442-domain-containing-protein
MKKDVNYYLSLGLDEAMAKYYASGRKKIIDVKANENYTLVITFNNGEKRLMDCKTFIKDNTVFAILKDYNVFKRVYVDSTHSISWDKDPNIDSEKVWSNKIDLCPDSSYVDSIPIEG
>NZ_CP048627.1|WP_008538270.1|961121_961364_+|helix-turn-helix-transcriptional-regulator
MNDIKINNLRIAIINELIRAREEQGISQKKLEELSGVKQPVIARIEKGKSIPNTDTLVKLLTPLGKKLVIVPLETVKNTK
>NZ_CP048627.1|WP_008538269.1|961408_962506_-|SAP-domain-containing-protein
MNNTSIYKPLSLKEVFALDYFYNRPIDTTLPDYKLSEIGSDYKSTLKKLITNGYLRKSTLYEELEFLTIPELKNILKSKQLKVSGKKSILLERIFSNFKQEELQYYIKNSFYILTEQGKNTLSQYEIYLINNNYFDFSIAIIEEYRNLLKKQNPNITTKEILYTICNHQIEESFQNKDFSFTGLWGILSNEAIYMSKNGDSKEALQRFIQFIALHLSGCKELKKNCPHITDYKRNYFTDSYVSEIHKNAIASNILYTNFDTFILAVLDEFLPKLPFSYYKAETIAYIIKTYLNGKTIDFTELKPDYILTSKKEHELHSMFGGFSFKTKSQNNTDDFVKNLKDWLKNPQSQPEIEEWYQNNKDKFK
>NZ_CP048627.1|WP_163604675.1|962560_963010_-|helix-turn-helix-domain-containing-protein
MLKELLKMNENINNITGKRLKELRESAGLTMQEEADVLNKTFNLQITRGMMSRWESGKAQPSNIFLSAYARYHNMDLNYIIGLTDVKKNLEEKYTLEEVSIENNINERESNLLEKFRALPEARKLKIEARIEAEYDIVMENEQESRQKA
>NZ_CP048627.1|WP_008538267.1|963135_963333_+|transcriptional-regulator
MRYLKLKSYFIANDIKFDVIAKELGISRTTLSKKINRFKGTDFKLDEVRKICKLYKIDANEFFLL
>NZ_CP048627.1|WP_008538266.1|963422_963575_+|hypothetical-protein
MNTYYEVEEYIFPIKTKEEAMKIAKRISSMRKKVIRILEISNGIVKEIKL
>NZ_CP048627.1|WP_008538265.1|963595_964624_+|hypothetical-protein
MLTKKFKSNKFYEVTRYIFKYGNETDELDASTTVWDTFEKAIAYIERYATGLKFASASIEEIVVNKEITADDYKHGDYEYVSTQKIYDVTDDCVEDFTKEKICYFEKSEQVDETIEEKSESVTEEVYKIFQVDEGTAWCIEAKTLAEAKEIAKKYKGHIVIKKGLKIVAEFNNIDDEKEYKICFGNDRTFGVQTVGLQSALELGQSYAKNHIGEKIVIIDEDKNIVKEFFEEKKALVKSNIKAKTNLKSRYLTKKAWDNSHQDFTSWANAEDIVDEEIVQHFRDCVSPVAYDAMYLQCGEPYKHGANPKTGKWEPAFITFARELGSWVYKGICFYREYEDVG
>NZ_CP048627.1|WP_008538264.1|964626_964923_+|hypothetical-protein
MELEINIPIWRKILLTPSEATELFGLPAQFFRVAGALTKSGQYDLPCCWIGSHLKINRPKLEKWLEDKSDGVTDFKTSYLLEKIKENTPRRGRKRKER

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Crispr_ID: NZ_CP048627_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048627_5

1182071-1182228

Orphan

Consensus_repeat	Method
TATTTAACTTTAACAAATGTTGTATTTGAATTAAA	PILER-CR
AAATACAACATTTGTTAAAGTTAAAT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP048627_5

>merge|NZ_CP048627|5|1182071-1182228|PILER-CR,CRISPRCasFinder
AAATACAACATTTGTTAAAGTTAAATTTTCTGGATTTATATCTATAATATCTTCCTTATTTAATTCAAATACAACATTTGTTAAAGTTAAATAGCTTGTTTTTTCCACTACCAAAAGACATTTTTTATTCAAATACAACATTTGTTAAAGTTAAATAC

>NZ_CP048627|5|4|1182071-1182228|PILER-CR
AAATACAACATTTGTTAAAGTTAAATTTTCTGGATT	TATATCTATAATATCTTCCTTATTTAATTCAA
ATACAACATTTGTTAAAGTTAAATAGCTTGTTTTTT	CCACTACCAAAAGACATTTTTTATTCAAA
TACAACATTTGTTAAAGTTAAATAC

>NZ_CP048627|5|5|1182071-1182226|CRISPRCasFinder
AAATACAACATTTGTTAAAGTTAAAT	TTTCTGGATTTATATCTATAATATCTTCCTTATTTAATTC
AAATACAACATTTGTTAAAGTTAAAT	AGCTTGTTTTTTCCACTACCAAAAGACATTTTTTATTC
AAATACAACATTTGTTAAAGTTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048627.1\|WP_008537982.1\|1178583_1179603_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP048627.1\|WP_008537973.1\|1182550_1183096_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537972.1\|1183405_1183963_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537963.1\|1188705_1189320_+\|cytidylate-kinase-like-family-protein	unknown	unknown	gnl\|CDD\|379060
NZ_CP048627.1\|WP_008537961.1\|1190976_1192458_+\|sucrose-6-phosphate-hydrolase	unknown	unknown	gnl\|CDD\|273554
NZ_CP048627.1\|WP_163604683.1\|1176694_1177843_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222888
NZ_CP048627.1\|WP_050900418.1\|1184087_1184294_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_163604684.1\|1177839_1178097_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537966.1\|1187453_1188695_+\|oligosaccharide-MFS-transporter	unknown	unknown	gnl\|CDD\|340862
NZ_CP048627.1\|WP_008537967.1\|1185968_1187441_+\|sucrose-6-phosphate-hydrolase	unknown	unknown	gnl\|CDD\|273554
NZ_CP048627.1\|WP_008537984.1\|1176011_1176698_+\|DUF2612-domain-containing-protein	unknown	unknown	gnl\|CDD\|371354
NZ_CP048627.1\|WP_008537975.1\|1181759_1181966_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537976.1\|1181481_1181757_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_163604685.1\|1178108_1178339_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_163604686.1\|1180253_1180703_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377457
NZ_CP048627.1\|WP_008537970.1\|1184412_1184589_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537981.1\|1179668_1180133_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_163604687.1\|1189391_1190732_+\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825
NZ_CP048627.1\|WP_008537977.1\|1180916_1181465_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP048627.1\|WP_008537968.1\|1184779_1185754_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380514

Protein	Function_ID	Function_description	E-value
NZ_CP048627.1\|WP_008537982.1\|1178583_1179603_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.92203e-18
NZ_CP048627.1\|WP_008537967.1\|1185968_1187441_+\|sucrose-6-phosphate-hydrolase	gnl\|CDD\|273554	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	6.47294e-161
NZ_CP048627.1\|WP_008537984.1\|1176011_1176698_+\|DUF2612-domain-containing-protein	gnl\|CDD\|371354	pfam11041, DUF2612, Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	4.8331e-30
NZ_CP048627.1\|WP_008537961.1\|1190976_1192458_+\|sucrose-6-phosphate-hydrolase	gnl\|CDD\|273554	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	1.11466e-168
NZ_CP048627.1\|WP_008537968.1\|1184779_1185754_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380514	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs. This group includes the ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs. Qymf is a strict anaerobe that could be grown in the presence of borax and its cells are straight rods that produce endospores. This group is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	1.94151e-99
NZ_CP048627.1\|WP_008537966.1\|1187453_1188695_+\|oligosaccharide-MFS-transporter	gnl\|CDD\|340862	cd06172, MFS_LacY, LacY proton/sugar symporter family of the Major Facilitator Superfamily of transporters. LacY proton/sugar family (also called LacY/RafB family) symporters are integral membrane proteins responsible for the transport of specific beta-glucosides into the cell accompanied by the import of a proton. Members include lactose permease (LacY), raffinose permease (RafB), and sucrose permease, which facilitate the transport of beta-galactosides, raffinose, and sucrose, respectively. The prototypical member, LacY, contains 12 transmembrane helices connected by hydrophilic loops with both N and C termini on the cytoplasmic face. The LacY/RafB permease family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.63607e-178
NZ_CP048627.1\|WP_163604686.1\|1180253_1180703_+\|phage-holin-family-protein	gnl\|CDD\|377457	pfam05105, Phage_holin_4_1, Bacteriophage holin family. Phage holins and lytic enzymes are both necessary for bacterial lysis and virus dissemination. This family also includes TcdE/UtxA involved in toxin secretion in Clostridium difficile. The 1.E.10 family is represented by Bacillus subtilis phi29 holin; 1.E.16 represents the Cph1 holin; and the 1.E.19 family is represented by the Clostridium difficile TcdE holin. Toxigenic strains of C. difficile produce two large toxins (TcdA and TcdB) encoded within a pathogenicity locus. tcdE, encoded between tcdA and tcdB, encodes a 166 aa protein which causes death to E. coli when expressed, and the structure of TcdE resembles holins. TcdE acts on the bacterial membrane. Since TcdA and TcdB lack signal peptides, they may be released via TcdE either prior to or subsequent to cell lysis.	6.04818e-33
NZ_CP048627.1\|WP_008537977.1\|1180916_1181465_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	3.4527e-49
NZ_CP048627.1\|WP_163604687.1\|1189391_1190732_+\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	2.42626e-07
NZ_CP048627.1\|WP_163604683.1\|1176694_1177843_+\|hypothetical-protein	gnl\|CDD\|222888	PHA02582, 10, baseplate wedge subunit and tail pin; Provisional.	1.92541e-08
NZ_CP048627.1\|WP_008537963.1\|1188705_1189320_+\|cytidylate-kinase-like-family-protein	gnl\|CDD\|379060	pfam13189, Cytidylate_kin2, Cytidylate kinase-like family. This family includes enzymes related to cytidylate kinase.	4.45307e-50

>NZ_CP048627.1|WP_008537975.1|1181759_1181966_+|hypothetical-protein
MNILKEFAKIFIKSKLDDEKRKLKDKLQKQIITTTSTSVVARNVAYLGIIDKLDGKGIAEVNKIIDKI
>NZ_CP048627.1|WP_008537976.1|1181481_1181757_+|hypothetical-protein
MTIDEIKNEVLENMKDFITTEVKDMAIKWIKDTALPAVKEVATAFVAELKNSAVDEKGWVKFRDTIFLPVAINGSLWIVEKVVNKLAPTEE
>NZ_CP048627.1|WP_008537977.1|1180916_1181465_+|N-acetylmuramoyl-L-alanine-amidase
MLKIFINPGHDMDLDPGACANNIREVDIALAIGEKLKRTMEVIGYPCQLLQSDNLNGETKGKPNVCATANNSGADIFISIHCNSAANASAKGTETLVYALDGGKSNILAKCIQVQIVNSLNMVDRGIKERPDLCVLRETSMPAVLVETAFISNQEDAYKLMYRIEEFANAIARGITDAEKLF
>NZ_CP048627.1|WP_163604686.1|1180253_1180703_+|phage-holin-family-protein
MHEEFINFIISLIPTKLETYVGGGVAFVGILLQHFIGQWNNQIEILLIFMIIDYITGLSAAYIMSNVYLDSRKGFKGIIKKIVILCLVILAHQMDVLIGQDALIKNVVLLFFIGNEGLSILENASNCGLPVPKKLKDTLAQFTEIKAKK
>NZ_CP048627.1|WP_008537981.1|1179668_1180133_+|hypothetical-protein
MRVFQIQKGEILIINGDKQYSDTVENFKLDSELTLKDLNEVIYDNYQECCVVNKEFKEYPNVDFEGYIDNVDIYIKAKSEREYVPPKEPTEEEKLLNKINEIMAANDEQIADIKDAMLVAVLTDDTELQSELKQEYASVIEDTNNKLQEVKAND
>NZ_CP048627.1|WP_008537982.1|1178583_1179603_-|tyrosine-type-recombinase/integrase
MRKPNGYGSIKKLSGNRRRPFVFVITQDGKQKAIEYFCTQTEAEIYAADYNKKNNKILHGHETTFDELFYRWLPFYIDKHQPSKSTINSYHNAYKHCLPLHEMPLKKIKYYHLQDIIDTVKRKGLSYSTCKKIRSTLSLMFKYALMMEYVDKNYVMLLNLGKNKQKRPHKPFTRQKINKLWSNIHIEGVDTILILIYTGMRIGELLELTKDNVYMRQKYIKITKSKTKSGLRIIPIHEKIFPLIQIRMQTPGKYLICRHDEKPYNYSIYCTLWDKIMLALNAKYTPHDCRHTCATLMDNAEVNYNAKRKILGHACNDVTNGVYTHKDIRQLRKAINKIK
>NZ_CP048627.1|WP_163604685.1|1178108_1178339_-|hypothetical-protein
MPTVTPEGAIALNVWANDTVAIVNGGHTVSGSSDRFDYRKPSISGTASFTGKPFGSNQAHNNIQPYISCYIWKRIS
>NZ_CP048627.1|WP_163604684.1|1177839_1178097_-|hypothetical-protein
MPAHSHTAATNTTGNHNHNATGCNGSSGPNNGHFGEIGNRTDGSYAVTESAGNHAHTITINNTGNGSAHNNLQPYFACYFWKRVS
>NZ_CP048627.1|WP_163604683.1|1176694_1177843_+|hypothetical-protein
MSELDFQKIFASGASSQIDWTDDNYLKGWGYLGNVPPSYQSFDSLQRLNDLKFKYLYDEFMGIETNTEELISNHNENSEAHKTLFDKKLDKNGGTVTGNLNASGYNITATKFIGNLQGKADSAANADLAAKATTAENANNANNSSVANKLGTSTVGSATKPVYINNGVASAVSVDLSTLAPKASPGLTGTPTAPTANVDTNNTQIATCGFVRNAIAKFAPMLDTMKKIYPVGSIYISTVSTNPATLFGFGTWEAMPAGRVLLAQGKSSWGTTYNAGSTGGEATHQLTVGELPSHGHSASTNTANLTGNANSIGINYDEVSVSGIISKNRGNDYGGTNNDHNKTGFLINASHSHTVTINSTGSNQAHNNLPPYLAIYIWERTA
>NZ_CP048627.1|WP_008537984.1|1176011_1176698_+|DUF2612-domain-containing-protein
MNRYESMMNHLLVQFSNTKVLQAIFCAISDELQLLDDTFNNLKEKRWIDTGEGAQLDGIGEIVDRNRLINNAITINFFGFENQINTTGFNQARFREYSEPYLSSTSLSDEEYRLILWAKVNKNNSLCYMNDTIKSIQFIFKTDIAIVQDIYNAKFIVGIGRKLTKNEILFANALDLIVRPAGVSCQSMTHFDKDNVFGFYNQKFAKGFGQAPLSEIFSNNLIKKGYVV
>NZ_CP048627.1|WP_008537973.1|1182550_1183096_-|hypothetical-protein
MKKIFSLLLTLVLVLFMYSSPVSAAYYGKFSSLLGKDYDMLFQTYFIFAQNNPNIVYRTSTDSNGYDEMYCFYYNNDIKTLETLTFNDEGMSVRYTVLQQFNDYNELINAVKKEDEFLHSIGTVIYDAQGTAHTSDWEYQYAYYAKDYGLLIAKQYTPRGEYKASLRFIDDKFDRIERSIY
>NZ_CP048627.1|WP_008537972.1|1183405_1183963_+|hypothetical-protein
MDSSNIFLTYFIPIVSACIAYRSYKLSKKKIEQNEQIYILNKKQIEQNEQNFHINEVKKVFPCIISETSFKNEVKICNKSDYPIFDIVVAQGINTMNINEGEINTSVKYIRTILPKQEIVLDMENKGMGMKKFLVVGIFFRDYLGKEWFKDSYGKFEEMQDYKEMLKQKKILIPPYDDAIYKISD
>NZ_CP048627.1|WP_050900418.1|1184087_1184294_+|hypothetical-protein
METKKTTWGGRRTGAGRPVGTKKDITRKTRSIAAFDDEWEMIRQFSKIVKKDKDTAKKILDGYYNEEK
>NZ_CP048627.1|WP_008537970.1|1184412_1184589_+|hypothetical-protein
MIRRKLNKKKGFKGFKVIIDTSILKELEAYKTLSINQLFDEQDKKEIEKAYNFYSDIK
>NZ_CP048627.1|WP_008537968.1|1184779_1185754_+|LacI-family-DNA-binding-transcriptional-regulator
MASIRDVAKLAQVAPSTVSLVLNNKGYVSEVSRKKVLDAIEKLNYVPNELARNLYRNSTNIIGIIVPDVAHPFFGAFIGALEIALYKYNYKIMVCSTIERENAEHEIVDMLRRQMIDGIIMGCHSLEVDLYDNVNKPIVAFDRIINNKIPIIRSDHEKGGRLAAQAMLKAGCKYPLQITGIKNSSMSAYLHHSAFKDELSRNGIEVINYEMEWNKFDMNYFKRVAVDVFEKYPHIDGVYGADMVVCACLGEARKRKLDIPKDIKFIAYDGTFITESSFYNITAIVQPINILAQKTAQMIVSLIKNENIEKEVIVPISIRYGDTC
>NZ_CP048627.1|WP_008537967.1|1185968_1187441_+|sucrose-6-phosphate-hydrolase
MKHTEALLKAEKFQQKMEKIAQNDYWRPQYHIAAPANWINDPNGFCFYKGEYHLFYQYHPYSSQWGPMHWGHVASKDLADWEHRPIALAPTDEYDKDGCFSGSAIEKDGNLYLLYTGHVDLDNSNGGNDRIETQCLAVSHDGLCFDKVENNPVIKSLPENLNIKTEHFRDPKVWKHGDWYYTVVGVQTKEKSGQVVVYKSQDLINWEFLNIMATSSVKENLGFMWECPNFAEVNGHEALILSPQGVKPEGNKFLNLHQSGYFLGKMDYQTGIFHRDSKFDLLDYGFDFYAPQIMQDEKNNRCLMIAWLDMWESNMPEQENHWAGMMSIPRVLEVKDNMIYSKPIEELSKLYKLKIHHEQVIDDVISFDDVNGDCYKLDIDFDLKNAQGFALKLRVSATEETVISYDKDTKKFKLNRDKSGCGVNGEREVYIEPVGEKMNLQIFSDRSSLEIFINDGQHVLSSRIYPSKEAKGIVFIPNGNIKTNVDFYEI
>NZ_CP048627.1|WP_008537966.1|1187453_1188695_+|oligosaccharide-MFS-transporter
MKNLIYWKLSAFFFVYFFSWLVFFAFLPIWFGQKIQLTGMQIGTIYAGNAIFSMVLQPFYGYLSDKIGMKRYLLFFIVILVALTGPFFVFVYEPLLKNNFYVGAVIGSFVLSLAYYAGVAVIESFIEKCGRIYNFEFGRARAWGSLGAAVGVFCAGRAFNYDPDLIFWMASGGAIILLLILLTVRIDESKADFIKSEPINLTNVKHLFSIKDVWLFMIFILGSACVYGVFDQQFAIYYASLFPTVEQGNETFGYLNSLQIFLEAGGMCIAPFIVNKIGPKHGLILAGSIMTFRMIGSGLANDPISISIIKLLHAIELSILLVSVFKYLAKNFDTRLSSVLYLVGYQLSNQLGSAILSPIVGNLYDTVGFKVAYLFLGAVVGVFTVFGAFVLISDKRIPKEKQSELKEYIQNEG
>NZ_CP048627.1|WP_008537963.1|1188705_1189320_+|cytidylate-kinase-like-family-protein
MDKNIVISISRKYGCGGRELAQILAEKLNIKLYDRKIVHIAAAKLETDDLNENDLLELENTVNPLTMAFFPFRSFGINLGEASRGIFLSEAKAIRRLANSGSCVILGRCADFVLDDLPNHFSIFVTADDEFRTERGKNVYGGKTLKELNIEDKKRGRYYNYYTGKEWGDPTNYNLVVNVSKFSLDEVAEAIIKYIEKVQVNRTK
>NZ_CP048627.1|WP_163604687.1|1189391_1190732_+|S-layer-homology-domain-containing-protein
MFNKSTLTITTSALVLMSTGVAGAASNPFSDVPQDSWAYDAVATLAADGVIDGFPDGTYQGNKTMTRYEMAQIVARAMAKEDLQKADKAIVDKLAAEFAEELDNLGVRVADLEKKSDNVKFTGTARLRYDDGDINATNPKADWDKDSASHAHIEYWIKGKVNDNWTGVSQIETEYNMKSDSITAYGDKDIQVNKIYAEGNFGDSMLKVGRYGEFSSYGRIIDTEISGAEYTFEAGDLSGALTYGRLKDSRTLAGTTFENPKDTKETFGAYLGTEYSSARLKYNLSPVTAIGATYGRLNEVTVAEKGNNFQDSVNFWEAGFNTKLADNLTLMAAYSKSDLDGVTDSVGSEVVNDGWFSELRYKQHNPSDVGSFAIFTNYRNVGAFSTIDATVDYTENVRGWTLGFDYVPMENTTIEVFYTTGTQVNATSTEGRQDVDIFRAQMEFYF
>NZ_CP048627.1|WP_008537961.1|1190976_1192458_+|sucrose-6-phosphate-hydrolase
MTHLEALAKAEQYQSKMAKIAKKSYWKPQYHISAPANWINDPNGFCYFNGEYHVFYQYHPYSSQWGPMHWGHVASKDLVNWKTKPIALAPTDEYDRDGCFSGSAIEKDNTLYLFYTGHVVLDKENDKDDAQLQTQCVAISEDGISFKKLENNPIINIDSFPEDLNILKEHFRDPKVWKYNDMYYQVVGAQTTEKTGQALIYKSKDLLNWEFVNVMAMSTEEENLGFMWECPNFAEIDNHEVLILSPQGVEPEGNKFLNLHQSGYFLGKMDYNTGIFERENDFEMLDYGFDFYAPQIMQDEKNNRCLMIGWLAMWESEMPEQEEGWAGMMSIPRVLEVKNNKVYSLPIPELKKLRKNNVNYDVNLVQNCILEGINGDCYELNTVFDLTKANGFNLKLRVSENEETVISYDKNSKIFKLNRDKSGKGVTGEREAKVNLQDEKIYLQIFSDYSSLEIFINGGEYVISSRIYPMQEATGIVFEPIGEIKAKIDFYEI

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Crispr_ID: NZ_CP048627_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048627_6

1531368-1531926

Orphan

Consensus_repeat	Method
ATTTAACTTTAACAAGAGTTGTATTTGAAT	PILER-CR
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CRISPRCasFinder
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CRT

8 spacers

The CRISPR arrays of NZ_CP048627_6

>merge|NZ_CP048627|6|1531368-1531926|PILER-CR,CRISPRCasFinder,CRT
ATTTAACTTTAACAAGAGTTGTATTTGAATAGAGAAAGTAGTTCATGGTAGTTTATCTGATTTTAAATTTAACTTTAACAAGAGTTGTATTTGAATGAGTTATTTTTGAAGATGAGGATAATAAAGTATCCGAATTTAACTTTAACAAGAGTTGTATTTGAATCTGTATTTTCTACCAGCAAATTTAGCACCGCCATCTATTTAACTTTAACAAGAGTTGTATTTGAATTTTTTTATATATTCACCTCTGTTGTTAAATCTCCATATTTAACTTTAACAAGAGTTGTATTTGAATATGTATTAGATAAACTTGTTGAGAAAAATTATATTTATTTAACTTTAACAAGAGTTGTATTTGAATATATATTGGAAATACTGTGGTCCGTACTATGTGGCAATTTAACTTTAACAAGAGTTGTATTTGAATTCTGTAGCTTTTTCCACTATAAATTTACCTTTTATCATTTAACTTTAACAAGAGTTGTATTTGAATTCTGTAGCTTTTTCCACTATAAATTTACCTTTTATCATTTAACTTTAACAAGAGTTTAAATTAAGT

>NZ_CP048627|6|5|1531368-1531860|PILER-CR
ATTTAACTTTAACAAGAGTTGTATTTGAAT	AGAGAAAGTAGTTCATGGTAGTTTATCTGATTTTAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	GAGTTATTTTTGAAGATGAGGATAATAAAGTATCCGA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CTGTATTTTCTACCAGCAAATTTAGCACCGCCATCT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TTTTTTATATATTCACCTCTGTTGTTAAATCTCCAT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATGTATTAGATAAACTTGTTGAGAAAAATTATATTT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATATATTGGAAATACTGTGGTCCGTACTATGTGGCA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGTAGCTTTTTCCACTATAAATTTACCTTTTATC
ATTTAACTTTAACAAGAGTTGTATTTGAAT

>NZ_CP048627|6|6|1531368-1531926|CRISPRCasFinder
ATTTAACTTTAACAAGAGTTGTATTTGAAT	AGAGAAAGTAGTTCATGGTAGTTTATCTGATTTTAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	GAGTTATTTTTGAAGATGAGGATAATAAAGTATCCGA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CTGTATTTTCTACCAGCAAATTTAGCACCGCCATCT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TTTTTTATATATTCACCTCTGTTGTTAAATCTCCAT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATGTATTAGATAAACTTGTTGAGAAAAATTATATTT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATATATTGGAAATACTGTGGTCCGTACTATGTGGCA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGTAGCTTTTTCCACTATAAATTTACCTTTTATC
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGTAGCTTTTTCCACTATAAATTTACCTTTTATC
ATTTAACTTTAACAAGAGTTTAAATTAAGT

>NZ_CP048627|6|4|1531368-1531926|CRT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	AGAGAAAGTAGTTCATGGTAGTTTATCTGATTTTAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	GAGTTATTTTTGAAGATGAGGATAATAAAGTATCCGA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CTGTATTTTCTACCAGCAAATTTAGCACCGCCATCT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TTTTTTATATATTCACCTCTGTTGTTAAATCTCCAT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATGTATTAGATAAACTTGTTGAGAAAAATTATATTT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATATATTGGAAATACTGTGGTCCGTACTATGTGGCA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGTAGCTTTTTCCACTATAAATTTACCTTTTATC
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGTAGCTTTTTCCACTATAAATTTACCTTTTATC
ATTTAACTTTAACAAGAGTTTAAATTAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048627.1\|WP_008537568.1\|1538553_1538754_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537577.1\|1530696_1531134_+\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NZ_CP048627.1\|WP_039881368.1\|1537216_1538536_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP048627.1\|WP_008537581.1\|1526203_1526953_+\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP048627.1\|WP_008537570.1\|1536640_1537153_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP048627.1\|WP_008537580.1\|1526957_1528388_+\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
NZ_CP048627.1\|WP_008537579.1\|1528402_1529491_+\|SufD-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|376550
NZ_CP048627.1\|WP_008537584.1\|1522607_1523492_+\|class-D-beta-lactamase	unknown	unknown	gnl\|CDD\|225322
NZ_CP048627.1\|WP_008537573.1\|1534718_1535096_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP048627.1\|WP_008537576.1\|1532052_1533072_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271182
NZ_CP048627.1\|WP_008537574.1\|1533466_1534645_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|272979
NZ_CP048627.1\|WP_008537582.1\|1524964_1525858_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP048627.1\|WP_008537571.1\|1535833_1536574_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537585.1\|1519886_1522508_+\|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP048627.1\|WP_008537572.1\|1535268_1535625_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP048627.1\|WP_008537578.1\|1529480_1530704_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_CP048627.1\|WP_008537563.1\|1539807_1540116_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_163604702.1\|1538973_1539387_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537583.1\|1523543_1524743_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP048627.1\|WP_008537587.1\|1518978_1519779_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225130

Protein	Function_ID	Function_description	E-value
NZ_CP048627.1\|WP_008537577.1\|1530696_1531134_+\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	6.87148e-53
NZ_CP048627.1\|WP_039881368.1\|1537216_1538536_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP048627.1\|WP_008537581.1\|1526203_1526953_+\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	8.94458e-112
NZ_CP048627.1\|WP_008537570.1\|1536640_1537153_+\|hypothetical-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	0.00395135
NZ_CP048627.1\|WP_008537580.1\|1526957_1528388_+\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP048627.1\|WP_008537579.1\|1528402_1529491_+\|SufD-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|376550	pfam01458, UPF0051, Uncharacterized protein family (UPF0051).	1.95518e-56
NZ_CP048627.1\|WP_008537584.1\|1522607_1523492_+\|class-D-beta-lactamase	gnl\|CDD\|225322	COG2602, COG2602, Beta-lactamase class D [Defense mechanisms].	6.50274e-52
NZ_CP048627.1\|WP_008537573.1\|1534718_1535096_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.34391e-13
NZ_CP048627.1\|WP_008537576.1\|1532052_1533072_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.63478e-12
NZ_CP048627.1\|WP_008537574.1\|1533466_1534645_-\|hypothetical-protein	gnl\|CDD\|272979	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits. [DNA metabolism, Degradation of DNA].	2.12755e-20
NZ_CP048627.1\|WP_008537582.1\|1524964_1525858_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	4.25302e-74
NZ_CP048627.1\|WP_008537585.1\|1519886_1522508_+\|heavy-metal-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP048627.1\|WP_008537572.1\|1535268_1535625_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	1.80637e-13
NZ_CP048627.1\|WP_008537578.1\|1529480_1530704_+\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP048627.1\|WP_008537583.1\|1523543_1524743_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	5.27362e-68
NZ_CP048627.1\|WP_008537587.1\|1518978_1519779_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	2.1586e-12

>NZ_CP048627.1|WP_008537577.1|1530696_1531134_+|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MFNLYNEILTEHNLHPNNKCSLADATHHQHGINPNCGDEITLSLKLNNNIIEDASFQGSGCAISQASTDIMIDLMLDQPIDKAKELCRLFIGMVQGTITDEKELAPLDEALTFKNISKMPARVKCAVLSWHTMETILDKALQSSQ
>NZ_CP048627.1|WP_008537578.1|1529480_1530704_+|cysteine-desulfurase
MKTNFRQDFPILNDEANPVVYLDSAATTQKPLSVIKSLENYYTSQNANPLRGLYKLSATATSEYEQARHSVAQFINANEDCEIIFTRNTTESLNLIAYTYGMENIQEGDEIVISILEHHSNILPWQMIAKLKKATLKYMYINDEGIISDEEIQTKITPKTKIVSITQVSNVLGIATPLKAIIKKAHEVGAIAIVDGAQGAPHMATDVQDLDCDFYAFSGHKMLAPMGIGILYGKKSILEQMPPFLRGGEMIETVSEQDATFAPLPEKFEAGTPNVSGAIALKAAIEYINQVGFSYIEQQEEKLMKIAMEELSKLPYITIYGSPDYKKHKGVLSFNIQDIHPHDVSSLVDYHGNIALRAGNHCAHPLLKYLNAQSTNRISFYFYNTKEDVYQFIEQIKKVRSYLGYDV
>NZ_CP048627.1|WP_008537579.1|1528402_1529491_+|SufD-family-Fe-S-cluster-assembly-protein
MNIKFEHANSLPMPTWRWLKLNDTTISYDNIDKLTPLKPQIINSTENISLASQKDITFANFPHITTGIGSDADNFVVNNASNKNYFTIKANTITQKPLIFIYDLTDNLDLIDDNYIYAQENSQATIIIVYNSPYHNQGFHASSTKIFAEKNAQVKIIQLQTLGKDYFNFDDIGTLAQENARISIQQIALGANKNYLGANIDLLQNNAQLNFQTDYLTTKNQMLDMNYIVNILGQKTKTNLTTNGILMHNAQKTHRATLDFKQGCKGSIGTEAENVLLLDEDIHNKSIPLILCGEDDIEGNHSAAIGEMDKEQLFYLQTRGLNERQIRQMQIDSKLQLITTNLPEELHAYISTYQQEAFYHEN
>NZ_CP048627.1|WP_008537580.1|1526957_1528388_+|Fe-S-cluster-assembly-protein-SufB
MNEAEKRQNEYINQTAERVENRYDFKKAEKDAYRLKKGLTPKIVEELSAKKNDPEWMREFRLRSLEIYHSLDVPPWGPSIDDLNIDNIVTYVKPNTDMQGSWKNVPEDIKDTFDKLGIPQAEQKSLAGVGAQYDSEVVYHNLKEEVAKLGVIYTDIETALKGPYEPMIREHFMKLVTPRDHKFAALHGAVWSGGSFVYVPPGVKVDIPLQSYFRLNAAGAGQFEHTLIIVDKGADLHFIEGCSAPKYNVANLHAGCVELFVADDAKLRYSTIENWSKNMYNLNTKRAKVGKNATMEWISGSFGSHISYLYPMTILAGENAKAEFTGITFAGKGQNLDTGAKMVHNAPHTSSLINTKSISKDGGASTFRSSVVVAKQAQHSKALVSCQSLMLDNISRSDTIPAMDVRTNKASVGHEAKIGRISDQAVFYLMSRGLSEAAARAMIVNGFANPISKELPVEYAVEMNHLIQLEMEGAIG
>NZ_CP048627.1|WP_008537581.1|1526203_1526953_+|Fe-S-cluster-assembly-ATPase-SufC
MTKSLLNITDLYASAEDKTILQNLNLNINKGETHILMGPNGAGKSTLGNVIMGNSQYKVDRGSIFFKDEDITSTRTDERAQKGLFLSFQSPIEIPGVSISQFIRTAMETKEKIRLKAFRDKLKTVTKTLGINEQWINRELNVGFSGGERKKIEMLQLLMLNPKLAILDETDSGLDVDAVKTVSRGIQTFQQDDQKSLLIITHNSKILEYLHIDYVHILINGKIIKTGDASLIKIINEQGYEPLITGQGE
>NZ_CP048627.1|WP_008537582.1|1524964_1525858_-|fumarylacetoacetate-hydrolase-family-protein
MKFVNFKIEDKKLIGVLANDEDKIIALNDLYADKTFCCMQDVIEQLNEDDIKDIQTKLDDENNDFKSYKLSEVKLLSPIERPIHDILCVGVNYQAHLEEASERAKNFKKTSNDAVYFGKRAIKIIGTNEDVQACLDIDNALDYEVELAVIIGKTGKNIPVDKVEDYIFGYSIFNDFSSRRLQLKHMQWFKGKSLDTYSAMGPVILHKSALPFPVEVDIKCSVNGELRQNSNTKLFLNDIPKVVSELSQGMTLEAGDIIATGTPSGVGMGYKPGKWLKSGDEVVCEIPPIGKLINKIK
>NZ_CP048627.1|WP_008537583.1|1523543_1524743_-|MFS-transporter
MFNIRVIMLIMLSFVLGTCEYVVIGILPNIAEDLNVSITQTGLLISAFAIVYSVGAPLITAYLSRFPRYRTVLSLMFLFTLGNVACMLAPNYPVMLASRIFLAAVSSALISMSMTFAPDVAPRKYTSSVISWIFAGFNIASVFGVPFSMFIVQFASWRVAFAFIVVVSILLLLLMIKFLPTKNLPPTNNIMEQLVLLKDRRIIMAVSAMILSGSSAYCFYTYLSPILLDKMGLSANLLTLAFVIFGVAAMISNLLSPMLNYWGGMRILWMIFAGQAIFSILLTFTMESFILGSVVICCLGVLMYLLNTPTQMYYLQVSKKFYPGTLALAGSLTSSSYNVGIAVGSFAGSLSVDLAGLNSVGITGGVFAILATIISYLLASRIKREYKEVIVRAMRMLNK
>NZ_CP048627.1|WP_008537584.1|1522607_1523492_+|class-D-beta-lactamase
MFKILAKIICVITICLFTTNCTSAENSTSSSNQNTSMQTTQTTKNSIDLSSYFENINGTAVFYTPDTNTYNIYNDELSTKQSSPCSTFKIFSTYVALDNKTIDANNSLRKWNGTIYWYDAWNKDIDLDTAFKTSCVWYYRQVIDEIGQDTMQKYIDKFDYGNKDISDWDGKTDLDDDPRDLKGFWLGTSLKISPLEQVQLLNRLFSANENPMALAKLKELMLVYEDNNTGLKIYGKTGFGKVNGENIDAWFTGFYEINNQRTYYSVRLDDPKNPQALSSTAKEIAINIIKNLNK
>NZ_CP048627.1|WP_008537585.1|1519886_1522508_+|heavy-metal-translocating-P-type-ATPase
MQKEHFDITGMTCSACSSRVEKAVGKLPGIINHSVNLLKNSMVVEFDEKLLSINEIIQAVEKAGYGASLHHNQSLGKQSPTKIENKAEDIHTQMKKRLFISIIFMLPLFYISMGHMFSLPMPSLLLGTENALSFAFTQFLLLIPIVFVNFKYYSVGFKTLFQLSPNMNSLIALGSSAAIIYGIYAIYKISFALGHGDLSTAHHFSMDLYFESAGMILTLITLGKFLESRAKNKTSDAITKLMNLAPKTALRLENNQEQEISIDDVKLNDILIVKAGASIPTDGIIIEGHGVIDESSLTGEPIPCDKTIDQTVIGGTINKSGYFKMRVTKIGENTTLAQIINLVDDATSSKAPIAKIADKISAIFVPIVITLAIIATIIWLFKGESLEFALSIGICVLVISCPCALGLATPTAIMVGTGKGASLGILSKSAQALETLHNINTVVLDKTGTITQGKPQVTDIYTSKEVTLQQLLTVASSLEKLSEHPLGEAILQVADKHNISTLAVEKFKQIAGQGLSGIIDNSICLAGNQKLLIAHDIENEQLFSLGNKLAQQGKTPLYFTKDDTILGLIAIADTIKATSPQAIQELKNLGINIYMLTGDNQLTAKQIAKQINLEENNIISDVLPQDKEAKIRQLQNQEQKVAMVGDGINDAPALARADVGIAIGAGTDIAIDSADIILMKNNLLDVVTAIKLSKAVIKNIRENLFWAFIYNIIGIPIAMGLFYTAFGLKLNPMIGALAMSFSSVFVVTNALRLRFFQNNYQTSSINKDNSSTAINIQAIDLNTSKGDDNMGLLNNLFHKNSEKQTEKIISIEGIMCQHCVRHATEALEKIDGVSDVKVSLENKNAVIHVNQNVTDEQITNAIVEAGYEVTAIK
>NZ_CP048627.1|WP_008537587.1|1518978_1519779_+|MBL-fold-metallo-hydrolase
MMKIQQIRNATLIITYANKRFLIDPMFAPKDFYPPIPKCFNPNTKWPLVDLPFAISKIIDNIDAVILTHYHIDHFDEFAVQALPKSLKIYVQDDIDKQLLINHDFTNIEVLTKEGNSFDDIKLYKVDCQHGIKALTVPYFEFTSNYFNMSVRYEAMGVIFQHKDEETLYLAGDTIFCDFVKNAIAQYAPAKIIINCADAQFEHSGSIIMGTDDILKLHQYAPNLKIIASHLDTVGHATLNRQQLSEFITQHKLTDYIFVPKDGEII
>NZ_CP048627.1|WP_008537576.1|1532052_1533072_-|tyrosine-type-recombinase/integrase
MKLPNGYGSVSKLSGKRRKPWIVKVTKGWTDDGKQIRMVLGTFKTKSEGLIALAEYNKDPYDIIERRYTLEDLYNMLAEQRLKNNQKMPLAAYKHCSKLHKMQFRDIKTAHIQEIIDNLSLGYASKKSIKNLFSLLYKYAMSFNLVDRNYAKFIKLPSEIKSDIHKPFSEEELEILWKNTEDYIVKIALILTYTGLRPSELLDIKLSNVFLDKKYIIGGAKTSMGINRRIPIAEKIYPFIKYFFDMANEFNNPYLITGDIKRKKLPYATLAYKWRKSENSAIKNHLPHDGRHTCNTLLDNADVKENIKNLILGHVGKTINEKVYTHKTIEQLKEAIDLI
>NZ_CP048627.1|WP_008537574.1|1533466_1534645_-|hypothetical-protein
MIRYTSDRKYANVIKDLNRKYNERFFNLNNRNVAGYDVANKVWFFDENIVDYNDYLRYARFTPEQLKYLRHFSTNLTNLFQEIDSKIDFQNFNTRYKFEGDVYSVYKSDTTTVIYLTDSVKGTEKLRVVYYKAFHDDLENTRILVTGSLSIYKGHGEIQLLADAIYVTRKKTKYQQQIDTWYDEIYKMDISPEYEQYSFSDIRYMGVISNNKTGKGYHDFKSILKNTNYIIKERFTTLTAENIAKEIKELYETESVDCICIIRGGGNKYDLLDFNNPLLIKTMYDSGLFIFTAIGHTSDNLICNKFAHYNASTPTALAMHFKRLQYAEVNKQKENELLLAKNDNNKLQEIIQTLHLENERLKRKINDLIDENENLNEQLKKSKKGFFSKLFG
>NZ_CP048627.1|WP_008537573.1|1534718_1535096_-|helix-turn-helix-transcriptional-regulator
MLGDRLKELRLNNGLKQSDLLKKFNLSSARYSQYENDKRVPDYELLIKFADFYNVSIDYLLGRTNVIKPENIDENDLLAKLNTADSETKASVEQFLNYLLYEKERKNKEKEDNSTKKNTDNEIAI
>NZ_CP048627.1|WP_008537572.1|1535268_1535625_+|helix-turn-helix-transcriptional-regulator
MNLIKIRKKSKFTQVDIAKLVGISDGYYSMIETGKRIPSIKVAKKIATVLNIPWEDIFNNIDTDFSIKLKEQRQLKELSVDDICILTQIDKNRYIAVENGLETPTKDELNLLKTILNF
>NZ_CP048627.1|WP_008537571.1|1535833_1536574_+|hypothetical-protein
MKTRRMVSKLIYDSERFLKMSVSARDLYTYLILHADDDGVVEAGTVLRLTKGADDDLNLLIYKNFITMLDPENKVVYVNDWLLHNTIRADRKTNSVYKDLLLKILPDVKMVEKKPRTDRIPKLEQHNVDSPELENEIIIKNQEENILNKILNLFKKYSIDENTLRIFQKKFDDDLIFKQLKNLEIEIKRGIKIENISAWLFVACDRNYPLKTQEYKNLSNEKHEENNNKSQKQLEKQLKLLENEID
>NZ_CP048627.1|WP_008537570.1|1536640_1537153_+|hypothetical-protein
MIEPNLINDLPYMIQLAIMSINKPPKAVALELNCSISAIYQALHGKRTLPAKKMRKFAENNFIAAASMAMQATGLNRLFRYRKTDRHIQARILELKIYDKKADEAMNKLPELLFNKNSNKDLSESDKKILLQSIDAMIERDNISLNLFMELDIKFNLDLVKRIKKARFDK
>NZ_CP048627.1|WP_039881368.1|1537216_1538536_+|replicative-DNA-helicase
MIKREIPNNIEAEEAVLGSILINQETIYGVSELLDIEDFYRKSHRTIFKVMLDLNTTKKAIDIITLTDYLTHISKLEEVGGIAFITSLANKVPSTANLKHYINIVKEKSMLRNIVHIAEYMENMGYDSESIDTPETVLDKAEQLLSKLTKKLVTTKVNNIKEQTLNAYVDIENIINHKGELLGLETGLQDLDSFLQGLKNSDFMILAARPSMGKTAFALNIASYLSIKKDTPVAFFSLEMSSNQLIHRIFSSYGLIPLFNLKSGNLDDAHTQKLIKVSNKLSQSKLIINDEISNLMSLRSIARKLKRENDIKLIIIDYLQLLEGTRRENRNLEISEISRSLKILAKELDIPIIALSQLSRSVESRQVKKPMLSDLRESGSLEQDADIVMFLYREDYYNPETENKNITDVIIAKNRNGPTGTIPVYFHKEYVRFQDLAKD
>NZ_CP048627.1|WP_008537568.1|1538553_1538754_+|hypothetical-protein
MCKKAKVTVKRAAEILGKSQQFVRIGLQRNILPFGVAMQMPGKTTYTYHISPKKLCDYAGIKEEDL
>NZ_CP048627.1|WP_163604702.1|1538973_1539387_+|hypothetical-protein
MNKIKRIILNFISEEDECFFICFLGKCIIICLIVYIFYSSIIDIYESYLDFNFSKQNITEYYQKNNTYPTDINQLDKENLVTINGDMYIYNKDTDHLIEYIPVISEQGKIINFTVKIYDINCNFITKKNYKSEDLNS
>NZ_CP048627.1|WP_008537563.1|1539807_1540116_+|hypothetical-protein
MLNKNTVISQIINILENKKNKELKSYITMFLFKDNDTNKSQSDIGVLFDGNEKDILTMYFTLTKILATHLDMDVDVFCKTTQDIITRGENVCDINIYKRCQI

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Crispr_ID: NZ_CP048627_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048627_7

1613210-1613370

Orphan

Consensus_repeat	Method
ATTTAACTTTAACAAGAGTTGTATTT	CRISPRCasFinder
ATTTAACTTTAACAAGAGTTGTATTTGAAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP048627_7

>merge|NZ_CP048627|7|1613210-1613370|CRISPRCasFinder,PILER-CR
ATATATATTTACCAAGAGTTGTATTTGAATCCATGGAATTTGGGAAATTTAAATACCTTTTATACTAATTTAACTTTAACAAGAGTTGTATTTGAATAGAATACAACATTAAAAATGAGGGTTTTTTCTGGATTTAACTTTAACAAGAGTTGTATTTAAAT

>NZ_CP048627|7|7|1613210-1613366|CRISPRCasFinder
ATATATATTTACCAAGAGTTGTATTT	GAATCCATGGAATTTGGGAAATTTAAATACCTTTTATACTA
ATTTAACTTTAACAAGAGTTGTATTT	GAATAGAATACAACATTAAAAATGAGGGTTTTTTCTGG
ATTTAACTTTAACAAGAGTTGTATTT

>NZ_CP048627|7|6|1613217-1613370|PILER-CR
TTTACCAAGAGTTGTATTTGAATCCATGGAAT	TTGGGAAATTTAAATACCTTTTATACTAATTTAACTT
TAACAAGAGTTGTATTTGAATAGAATACAACA	TTAAAAATGAGGGTTTTTTCTGGATTTAACTT
TAACAAGAGTTGTATTTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048627.1\|WP_008537477.1\|1607070_1607283_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537465.1\|1616740_1618603_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP048627.1\|WP_008537474.1\|1609053_1609215_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537478.1\|1606821_1607028_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537464.1\|1618720_1620124_-\|heme-anaerobic-degradation-radical-SAM-methyltransferase-ChuW/HutW	unknown	unknown	gnl\|CDD\|274985
NZ_CP048627.1\|WP_154645562.1\|1613632_1614373_-\|ChaN-family-lipoprotein	unknown	unknown	gnl\|CDD\|350609
NZ_CP048627.1\|WP_008537476.1\|1607348_1607762_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|366099
NZ_CP048627.1\|WP_008537473.1\|1609277_1609802_-\|antirestriction-protein-ArdA	unknown	unknown	gnl\|CDD\|377800
NZ_CP048627.1\|WP_008537469.1\|1612502_1612919_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537460.1\|1621506_1622247_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP048627.1\|WP_071987386.1\|1612070_1612139_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537475.1\|1608066_1608939_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|372314
NZ_CP048627.1\|WP_008537463.1\|1620120_1620660_-\|flavodoxin	unknown	unknown	gnl\|CDD\|378898
NZ_CP048627.1\|WP_008537459.1\|1622246_1623047_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP048627.1\|WP_008537472.1\|1610100_1611723_-\|PcfJ-domain-containing-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537457.1\|1624084_1625062_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223687
NZ_CP048627.1\|WP_163604729.1\|1620766_1621483_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|130358
NZ_CP048627.1\|WP_008537471.1\|1611766_1612102_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942
NZ_CP048627.1\|WP_008537458.1\|1623043_1624066_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP048627.1\|WP_008537466.1\|1614609_1616631_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|227112

Protein	Function_ID	Function_description	E-value
NZ_CP048627.1\|WP_008537465.1\|1616740_1618603_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	8.968e-69
NZ_CP048627.1\|WP_008537466.1\|1614609_1616631_-\|TonB-dependent-receptor	gnl\|CDD\|227112	COG4771, FepA, Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism].	2.98596e-76
NZ_CP048627.1\|WP_154645562.1\|1613632_1614373_-\|ChaN-family-lipoprotein	gnl\|CDD\|350609	cd14727, ChanN-like, ChaN is an iron-regulated, heme-binding protein. This family represents a domain found in ChaN, a heme-binding/iron-regulated lipoprotein from Campylobacter jejuni. ChaN, possibly involved in the uptake of heme-iron, contains a pair of cofacial heme groups situated between two ChaN monomers. A single tyrosine residue contacts the heme-bound iron atom while the heme-binding regions of each monomer also have contacts to the heme in the complementary monomer. ChaN presumably associates with an outer membrane-associated receptor, ChaR. Campylobacter jejuni is an important cause of food-borne illness, and is dependent on iron uptake from the host. ChaN like proteins are related to the Tiki/TraB like family of proteases. Proteins containing this domain also include protein reticulata-related from Arabidopsis which may play a role in leaf development.	2.72772e-77
NZ_CP048627.1\|WP_008537476.1\|1607348_1607762_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	9.88498e-38
NZ_CP048627.1\|WP_008537473.1\|1609277_1609802_-\|antirestriction-protein-ArdA	gnl\|CDD\|377800	pfam07275, ArdA, Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	7.60256e-29
NZ_CP048627.1\|WP_163604729.1\|1620766_1621483_-\|ABC-transporter-permease	gnl\|CDD\|130358	TIGR01291, Nodulation_protein_J, ABC-2 type transporter, NodJ family. Nearly all members of this subfamily are NodJ which, together with NodI (TIGR01288), acts to export a variety of modified carbohydrate molecules as signals to plant hosts to establish root nodules. The seed alignment includes a highly divergent member from Azorhizobium caulinodans that is, nonetheless, associated with nodulation. This model is designated as subfamily in part because not all sequences derived from the last common ancestral sequence of Rhizobium sp. and Azorhizobium caulinodans NodJ are necessarily nodulation proteins. [Cellular processes, Other, Transport and binding proteins, Other].	9.71778e-15
NZ_CP048627.1\|WP_008537460.1\|1621506_1622247_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.38708e-77
NZ_CP048627.1\|WP_008537464.1\|1618720_1620124_-\|heme-anaerobic-degradation-radical-SAM-methyltransferase-ChuW/HutW	gnl\|CDD\|274985	TIGR04107, coproporphyrinogen_III_oxidase, putative heme utilization radical SAM enzyme HutW. HutW is a radical SAM enzyme closely related to HemN, the heme biosynthetic oxygen-independent coproporphyrinogen oxidase. It belongs to operons associated with heme uptake and utilization in Vibrio cholerae and related species, but neither it not HutX has been shown to be needed, as is HutZ, for heme utilization. HutW failed to complement a Salmonella enterica hemN mutant (), suggesting a related but distinct activity. Some members of this family are fused to hutX.	8.84297e-175
NZ_CP048627.1\|WP_008537475.1\|1608066_1608939_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|372314	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase. Members of this family belong to the PD-(D/E)XK nuclease superfamily. These proteins are transposase proteins.	4.20635e-49
NZ_CP048627.1\|WP_008537459.1\|1622246_1623047_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.66554e-121
NZ_CP048627.1\|WP_008537463.1\|1620120_1620660_-\|flavodoxin	gnl\|CDD\|378898	pfam12641, Flavodoxin_3, Flavodoxin domain. This family represents a flavodoxin domain.	2.3684e-61
NZ_CP048627.1\|WP_008537471.1\|1611766_1612102_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	4.08919e-24
NZ_CP048627.1\|WP_008537458.1\|1623043_1624066_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	4.53897e-86
NZ_CP048627.1\|WP_008537457.1\|1624084_1625062_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|223687	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism].	3.05508e-54

>NZ_CP048627.1|WP_008537469.1|1612502_1612919_-|hypothetical-protein
MKQVNILLKSNGELKRIITDKKMSVNEYTDILNCDYIDIKGLKLDELNLNISLVFDDEFLFTDKAINKKASVLFGYKQHEEVLCGDVLVQKDIETPEGIIAVGFNEEEATVIEAYIENLKYEHIKFIKQEPCAKFIPF
>NZ_CP048627.1|WP_071987386.1|1612070_1612139_-|hypothetical-protein
MNFHYLKKWRKNNENIWRRTSC
>NZ_CP048627.1|WP_008537471.1|1611766_1612102_-|single-stranded-DNA-binding-protein
MKIYGVGRVAKDFEIDYSPKGICILKFPFAENIFDRKTKEKKAQYYNVVVFGRLAEIMGDLGIQKGDKMQIEGNINISEYTDKEGKKKYYTQIILNSFELCSTKNKQIDKK
>NZ_CP048627.1|WP_008537472.1|1610100_1611723_-|PcfJ-domain-containing-protein
MKIIAETKIGSREKYYNYHNNGVAGIFINKDSAVCRYCSSVFQFNSMCHYEAIEEISCPICGRHYKKSEIMFSGAYDSYLPYVTVFKILEMKTKIKLKICYTAIQIKDIQSYPNVYYIKEVFTFDIKNSDVIWEKSKDNKLIEKREIGYITDYEQLREHSALWFFHIRHNIKSGLSLNSLLKILRDTIQKKENIIHNYTKKSLYVDNVDLKHKLFANVLNLAHKVRFWDSENIIYNRNFLRNKSLLLDNFVDVNFEKSIYILMVTKNISYHRACFEYLSLPYTKTVLKNFSYDNIFLLKLIYKIKNINIANFLFSYYKSWLNSLTYMDFMYNFSSLPRKIEAICDFYNLFVLKIYPQLHPTKLLENKQELIDIMNLWYSANNKIKKNFIRHKIPFSKAHDWLSIEVAKQAEQEIRFHISKNIINRFNIYMMNTKFQCSCINKYSKLKYIAKQMKNCSAGYKDRINNRLQLVVISDNSGKPKVLLEINQDSIVQAKLYRNVPVFRDNLLNDLVIEFAQIAKLKVATDDVYMKQDTKLKCIA
>NZ_CP048627.1|WP_008537473.1|1609277_1609802_-|antirestriction-protein-ArdA
MKDFYVKVYLTNLGKYVEGYLVGKWVDVTSDTDWIEELSNIGVKDNSDYEEYFITDVDTNINIEIGEYTSINTLKKIAEQIEELIDIIDVDTFNAILDCNSDFDEAYEIAIDGNYTYYDDVDDEYDLGNTLVDEGFLGHIDDNLKMYLDYEKIGRDYMINVNGSFSSNGFVALY
>NZ_CP048627.1|WP_008537474.1|1609053_1609215_-|hypothetical-protein
MINTKKLINELNNIKIDLKILELIEEQYKYQQMQFQKKTIIKKLQRLQQSLVQ
>NZ_CP048627.1|WP_008537475.1|1608066_1608939_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNKIKNFSRLNDYFFKNLMGRDERKGLALDFLNSIVELEDNKYFVDLKFLNTEKTPDKIDGKLSRLDIQAQTDDGTFWDIEVQVSREDYMPERSLFYLSRIYGNQLNSGEKYPVLKRTIGINLLNFNLDQLRTLSSWHNYCCFCVPNTNVVVTRHLEMHFLELPKIKISDIKRLKKAEQWGAYFSGKYTDKDMEVLAMNNPVIKQALDYEAYFNSNDELRKEYLAREEAILDERIRHGYSHQQGIVKGIEKNKIETATNALKEGLSPELIAKITNLSIEEVNRLRQQLNK
>NZ_CP048627.1|WP_008537476.1|1607348_1607762_-|single-stranded-DNA-binding-protein
MNKVILAGRLTKDIEMRYTQTGKAIARFILSVNRRVSKDKEKQQADFIPIIVWNKLAEICSKYLTKGSQILVEGHLQIRDYVAQDGKKHYIAEVIAQKLEFMGSKVTAGNEQLQNQEQNISQEEITQDTATDEEIPF
>NZ_CP048627.1|WP_008537477.1|1607070_1607283_-|hypothetical-protein
MCMILYIKGNNQEKVYSFKLDKRNVNSYFHKALKFLYQNNGIVFVKYKKQHTIKLVCLAEGYTISITGSD
>NZ_CP048627.1|WP_008537478.1|1606821_1607028_+|hypothetical-protein
MTKSKQVVYQDNEYVIFEDGSGGAIMSNEEIEDAEKFDEWFNSLTKEEQDAYIQDLKDHGLLDEDEEL
>NZ_CP048627.1|WP_154645562.1|1613632_1614373_-|ChaN-family-lipoprotein
MSQNYDVVFFDEYHDQKSIHEAELSFFQEMYKQNKDMILSMEMFERDVQPVMDKYLNDEITETEFINNSRPWENYQTDYKPLVEFAKEKDMYVLASNIPRRIANQYTKVGDLALIEDKDKIYLPKKHLVEYERYYDKFKNYMSMGDGQGHMMMTPERIEAFYKAQCLKDDTMAESIVEFLKEHKDTKVLHVQGSFHGDEHLGVVEKVNKLNPSLETVVITPIEAKDYEKMKHNYSEDTIIMTFVRK
>NZ_CP048627.1|WP_008537466.1|1614609_1616631_-|TonB-dependent-receptor
MRLSTKKQQTLLTLSVLLGLSSPVYAQDIQNNDVIVTPDVVVTATRTQEEVKAVPQTVEVITKEDIEQLGATDVYSALRLAANVDVTSAGMAGHNVMIRGMSTNHTLILIDGKRFAGEDTSATQNVYALGRLSLSNIERIEIVRGSASAQYGSDALGGVINIITKKSKEPSVMVGLSTGSEAINNYYHIDFGKQGNFSSTFDMRFSDVRKNMQAGDEGSNYYGPIQDFNFAGTWDLGNDKEIDLTLGYYNEHTKADYADKYTSTGVFQTSKDKKEWYDYRRYDYSLGYSGKTDNSDYMIRTFYSRLDKENNLYNYRNNFPGPMENILGSMYPKYDWDKSTYTLWGIEGKNTVQLSDNHLLTFGGEYRQNKVEGTRLSDGGDNVHQVSQSGNGIVSNKYYSDKEINTWAGYIQDEWQVNDKLLVIPSMRYDHDSSFGGEVTPKIGATYFISDNSRIKANWGKGFKAPTISELYMAMHRAMGGQTVNVYGNPDLKPEKSTSWDISFEAEKDNNFGKLTYFNNDVKNLITTKQIGSSYYDQRYINVDEAEIDGVEMEIGRNLDDKWTIKATSNWLDATDKVSGDRLDNRARNMTTLQLLYDDHDDWGYSAILWQQWTNKYHYDDNDYNFNTTNFVLNKKFGEGNRVYAGVDNIFDKKISDIGLDGMIWRLGAEWTF
>NZ_CP048627.1|WP_008537465.1|1616740_1618603_-|TonB-dependent-receptor
MLTKKRKSTLLTLSILMGLTSCTQASEVIQTPDVVVTATKTQQEVKAVPNAVEVITSEDIEQLGATDIYSALKLATNVDVSQIGAGHRLMVRGKNAGALVLLDGRRMSNEYSSMTRGAFDLDKINLSSVERIEIVRGAASAQYGADAESGVINIITKKSKEQSVTVGANTGTDVMNNYYRFDLGQQGKFNGVVNANFAKYRKREFVGGTGTNYFGPRTNYDFSGTYAFDDSNNLDFYIGYYDEKSKKITDYSSMGMGKSSTNYDKTNQDYSIAYNGKGDNSNYMIRAYYNRYDKEEYKGSKNNGYKQNTFDTLGIEAKNTVQAGDEHLLTYGVEYKNIGVEGPILALGEGNSKDNSAYAGYIQDEWFINDKILFIPAVRYDHDEQFGGKTTPKLGATYFLSDNSRIKANWGKSWRAPNLVELYAGQDHGFTTIYGNPDLRPEEATTWELGFEAEKDNNWLKLNYFNSKYDNLITYDKVNGKNTFINAQDAKTDGVEFEVGRQFNDNWSIRATSNWLNAKDSDGEKVSATADNISTLELDYDDNDINGYSAKLWNSWVSNYHYANENYDYNTLNFVVNKKFAFDDGRNGRIYAGVDNIGDKKIGDIYLEGRIWRVGAEITF
>NZ_CP048627.1|WP_008537464.1|1618720_1620124_-|heme-anaerobic-degradation-radical-SAM-methyltransferase-ChuW/HutW
MSKIREILDSLSTEQYKMMIGEKSCQPLTETFSKKRVVHPGANGQMVPPVKQQEIWLEYMQRKGDKSKKKAVYIHIPFCSQICLYCGFFQNYSNEERETMYVDRLIKQLLMAKEYKYVQDSVINAVFFGGGTPSTLSPYNADRLLKTMNEVLPLANDCEITMEARVHDLVDEKLQVWFKHGVNRISVGVQSFDTAIRQSMGRKDDKETVIENLKRAASYNQAVLIIDLIYGLPAQDVDNFVNDLKIADSLPIDGMDLYQLNVFEQSALKKAIDNGKIPPAATTKQQAKYLEAAISYLDELAYKRLSVCHWAKTNRERSMYNTLAKSGADVIPFGSGAGGFVGDISMFLNRDLQRYMNAIDEGKWPLMVLTKEAEGKVLFKDIQAQTENCMVNIQKLAQVYSEELLQLEEVLNIWVEYGLFEKCGHTYKMTVAGQFWQNNITQTIIELTQQLLMGKKSFEVQPIAAQG
>NZ_CP048627.1|WP_008537463.1|1620120_1620660_-|flavodoxin
MKSIVVYSSLTGNTKMVGEAIAEVLAPNCDIYKVEDNPDITGYDLVVVGFWVDKGTADAKASKFLKSIRNSKVAVYATLGAEPDSEHAKTSLQNGIDMLDSSNEIMGRFICQGKIDPKLLEAMKKMFGTKVSKENFHAVDEKRLERHRKASTHPDEQDLANAKKVFSEIKAKMSGEMNL
>NZ_CP048627.1|WP_163604729.1|1620766_1621483_-|ABC-transporter-permease
MREMALLQKKMGKLGYIFSAVMFPIIYLFAFGMGIGPVMNNIHGGYLPFLAKGMLSITVMMNAFQQTSLSVSVGRFYFKTFQTLLLSPISAFQVILGITLAGVTRGFIAGGIIYIIAMVFFDVPMLSLWGFLGILLSAFCFGILGIAIGLWIKNPDALSSVINFIITPMTFFCGTFFPLYNLPDWLQIVVGILPLTLANNLLRTEVFSVYSLLDMIYLIIITLILLVISRYQLKNYNE
>NZ_CP048627.1|WP_008537460.1|1621506_1622247_-|ABC-transporter-ATP-binding-protein
MQVLSLNKINKQIKDKIILKDISFTLEEGEILGLLGPNGAGKTSMMKIISGLSRANSGKLEILGIEADKERAKIKSQLGFVMQDNNMEREFSVKEALLYYARLYKMKNYKYEVEKIISQFEMNTWQDRKIEKLSGGMARKAMIARALLVKPKILLLDEPSVGLDPDVRYDIWQEIKKLKNMGISVIITTHYMEEAEYLCDKIAILKQGELLAIDEVEKIKQIMQKDENEDITLEKAFLRFIGKEAY
>NZ_CP048627.1|WP_008537459.1|1622246_1623047_-|ABC-transporter-ATP-binding-protein
MILQADKLTLQYGQKIIADKLNFKVDKSEIISIIGPNGSGKSTLLKSLGRLLKPTHGTVLLEGKDIQKMKPGDIARKMSILPQSSTAPMDMTVYDLVCYGRMPHQGLFSSPNKIDEEKIEEALTQTNTSHMRYRRLDTLSGGERQRAWLAMAIAQNPEILLLDEPTTYLDVKHQLDLMNLVYKLYETRRITVIMVLHDLNHAARYSHRLVAVKKGKIFAEGLVQDVFTEKILCDLYDVETSVMSLEQNGQKHLVCFPYDVKQGEKN
>NZ_CP048627.1|WP_008537458.1|1623043_1624066_-|iron-ABC-transporter-permease
MAIASISEKIKDPRSKKRNLVMFLGLILLVAVLFISVIIGTANTSFSDLYNVFVGVQNTESYRILYHIRIPRVLTAMFAGINLAIAGCILQGVLKNPLADPGIIGVSAGAALAAMVVMIILPEYTNMVPIVAFVGAMIATLILFALAWEDGIQPLKLILAGVAVSAFFAGGMTCLMVFFSDKIQGTVNWMAGGFSGASWKHVTMILPYTIIGLVGVSISSKLLNALQLGDDVAKSLGTRVEATRFFLVTLAALLAASAVSVAGMLTFVGLIVPHMMRLVVGSDFNYLLPSSAIFGGILLIVADTVARTAFSPIEVPVGVFMSFIGAPFFLYLLKRGMQKR
>NZ_CP048627.1|WP_008537457.1|1624084_1625062_-|ABC-transporter-substrate-binding-protein
MSGYLRKVIFGIICLIAIGGLFLGFRSHEGDTNNISSTRVVTDSTGREVTIPTHPKRVVLLNASHLDLYYYAGGKETNTIVGKPTSEALSDEVKEGTKNIEQIGVIHNPSVETILKLQPDLVIGVNVPFHQQLIPTLEKANIPVLIKSLDTYEDVISTLGFYGELTGEEEIAQAKIKEIEADYEKAIARAENKTAPRSLIIWGTTDSFSMATSKSFTGDLLKRLGGNNIADNVDSVAKDSGYIPLGMEYIATQDPEAIFVVTHGDVDAVKNSIDENLGQNPLWQDISAVKNNRVYVLPYQLFAVNPGTNIAKAINILADDLYLQE

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Crispr_ID: NZ_CP048627_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048627_8

1683069-1684209

Orphan

Consensus_repeat	Method
ATTTAACTTTAACAAGAGTTGTATTTGAAT	PILER-CR
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CRISPRCasFinder
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CRT

17 spacers

The CRISPR arrays of NZ_CP048627_8

>merge|NZ_CP048627|8|1683069-1684209|PILER-CR,CRISPRCasFinder,CRT
ATTTAACTTTAACAAGAGTTGTATTTGAATAATATTCTCTTAGCACCACCTATAAAATCTGTTGGTATTTAACTTTAACAAGAGTTGTATTTGAATATATTATCCCGATATCGAATAGTTATTTTACTTAAAATTTAACTTTAACAAGAGTTGTATTTGAATTCTGGTGTTTTCTTTTTCCATGTTGTATCTGATTATTTAACTTTAACAAGAGTTGTATTTGAATTATGGCATACCTAGCCAAGAATTTACGAAGTTTTATTTAACTTTAACAAGAGTTGTATTTGAATATATGATTTTTAACTTTTTCTATTAAATCTTCACATTTAACTTTAACAAGAGTTGTATTTGAATCCGACACCAGCACCAATATAATATTCATTTTTAAAAATTTAACTTTAACAAGAGTTGTATTTGAATAAAGTGGAGTGTTATTCAGAAAGAAATGAAATACAATTTAACTTTAACAAGAGTTGTATTTGAATTGTAATTATACATTTTTAGATTGTATAGAAAAAGCAATTTAACTTTAACAAGAGTTGTATTTGAATATGTTATTAAAATCACAATTATTAATAATTACATTAATTTAACTTTAACAAGAGTTGTATTTGAATTCTGTTGTGTAAATAATAAAAGGATTTTGTATTGATTTAACTTTAACAAGAGTTGTATTTGAATTGACTAAGTAATACTACATCACCAACTTGACAGGCTATTTAACTTTAACAAGAGTTGTATTTGAATACGGTGTTTTACCTAGTGCAGGGCCATTAGGTATATATTTAACTTTAACAAGAGTTGTATTTGAATGTTATCAGATACGTATTTTCCGCACAATAGCCAGTATTTAACTTTAACAAGAGTTGTATTTGAATTGTGAACGGGCAAAACTTGTTTGTATAGCTCGTTTAATTTAACTTTAACAAGAGTTGTATTTGAATGAATAAAAACCACTTGTATTTATAGCTTTTAACATATTTAACTTTAACAAGAGTTGTATTTGAATTTATCCTGTTCCATTTAATCACTCCCTATTAACCAAATTTAACTTTAACAAGAGTTGTATTTGAATTTCCTAGTTTCATTAGCTACTTGCTCCTCCTCTTGCATTTAACTTTAACAAGTGTTGTACAAAAAA

>NZ_CP048627|8|7|1683069-1684143|PILER-CR
ATTTAACTTTAACAAGAGTTGTATTTGAAT	AATATTCTCTTAGCACCACCTATAAAATCTGTTGGT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATATTATCCCGATATCGAATAGTTATTTTACTTAAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGGTGTTTTCTTTTTCCATGTTGTATCTGATT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TATGGCATACCTAGCCAAGAATTTACGAAGTTTT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATATGATTTTTAACTTTTTCTATTAAATCTTCAC
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CCGACACCAGCACCAATATAATATTCATTTTTAAAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	AAAGTGGAGTGTTATTCAGAAAGAAATGAAATACA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TGTAATTATACATTTTTAGATTGTATAGAAAAAGCA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATGTTATTAAAATCACAATTATTAATAATTACATTA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGTTGTGTAAATAATAAAAGGATTTTGTATTG
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TGACTAAGTAATACTACATCACCAACTTGACAGGCT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ACGGTGTTTTACCTAGTGCAGGGCCATTAGGTATAT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	GTTATCAGATACGTATTTTCCGCACAATAGCCAGT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TGTGAACGGGCAAAACTTGTTTGTATAGCTCGTTTA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	GAATAAAAACCACTTGTATTTATAGCTTTTAACAT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TTATCCTGTTCCATTTAATCACTCCCTATTAACCAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT

>NZ_CP048627|8|8|1683069-1684209|CRISPRCasFinder
ATTTAACTTTAACAAGAGTTGTATTTGAAT	AATATTCTCTTAGCACCACCTATAAAATCTGTTGGT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATATTATCCCGATATCGAATAGTTATTTTACTTAAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGGTGTTTTCTTTTTCCATGTTGTATCTGATT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TATGGCATACCTAGCCAAGAATTTACGAAGTTTT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATATGATTTTTAACTTTTTCTATTAAATCTTCAC
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CCGACACCAGCACCAATATAATATTCATTTTTAAAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	AAAGTGGAGTGTTATTCAGAAAGAAATGAAATACA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TGTAATTATACATTTTTAGATTGTATAGAAAAAGCA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATGTTATTAAAATCACAATTATTAATAATTACATTA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGTTGTGTAAATAATAAAAGGATTTTGTATTG
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TGACTAAGTAATACTACATCACCAACTTGACAGGCT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ACGGTGTTTTACCTAGTGCAGGGCCATTAGGTATAT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	GTTATCAGATACGTATTTTCCGCACAATAGCCAGT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TGTGAACGGGCAAAACTTGTTTGTATAGCTCGTTTA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	GAATAAAAACCACTTGTATTTATAGCTTTTAACAT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TTATCCTGTTCCATTTAATCACTCCCTATTAACCAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TTCCTAGTTTCATTAGCTACTTGCTCCTCCTCTTGC
ATTTAACTTTAACAAGTGTTGTACAAAAAA

>NZ_CP048627|8|5|1683069-1684209|CRT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	AATATTCTCTTAGCACCACCTATAAAATCTGTTGGT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATATTATCCCGATATCGAATAGTTATTTTACTTAAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGGTGTTTTCTTTTTCCATGTTGTATCTGATT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TATGGCATACCTAGCCAAGAATTTACGAAGTTTT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATATGATTTTTAACTTTTTCTATTAAATCTTCAC
ATTTAACTTTAACAAGAGTTGTATTTGAAT	CCGACACCAGCACCAATATAATATTCATTTTTAAAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	AAAGTGGAGTGTTATTCAGAAAGAAATGAAATACA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TGTAATTATACATTTTTAGATTGTATAGAAAAAGCA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ATGTTATTAAAATCACAATTATTAATAATTACATTA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TCTGTTGTGTAAATAATAAAAGGATTTTGTATTG
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TGACTAAGTAATACTACATCACCAACTTGACAGGCT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	ACGGTGTTTTACCTAGTGCAGGGCCATTAGGTATAT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	GTTATCAGATACGTATTTTCCGCACAATAGCCAGT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TGTGAACGGGCAAAACTTGTTTGTATAGCTCGTTTA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	GAATAAAAACCACTTGTATTTATAGCTTTTAACAT
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TTATCCTGTTCCATTTAATCACTCCCTATTAACCAA
ATTTAACTTTAACAAGAGTTGTATTTGAAT	TTCCTAGTTTCATTAGCTACTTGCTCCTCCTCTTGC
ATTTAACTTTAACAAGTGTTGTACAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048627.1\|WP_008537387.1\|1681603_1682869_+\|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	unknown	unknown	gnl\|CDD\|225428
NZ_CP048627.1\|WP_008537386.1\|1684261_1684861_-\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|377175
NZ_CP048627.1\|WP_008537388.1\|1680621_1681428_+\|DUF368-domain-containing-protein	unknown	unknown	gnl\|CDD\|377196
NZ_CP048627.1\|WP_008537382.1\|1687037_1687304_+\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|377476
NZ_CP048627.1\|WP_008537380.1\|1687419_1689903_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP048627.1\|WP_008537389.1\|1679353_1680310_+\|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl\|CDD\|129820
NZ_CP048627.1\|WP_008537375.1\|1696861_1697458_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380317
NZ_CP048627.1\|WP_008537392.1\|1676931_1677279_-\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|119344
NZ_CP048627.1\|WP_008537376.1\|1696061_1696793_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|234640
NZ_CP048627.1\|WP_008537393.1\|1676042_1676492_-\|dUTP-diphosphatase	unknown	unknown	gnl\|CDD\|184417
NZ_CP048627.1\|WP_008537397.1\|1673079_1673304_-\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|224830
NZ_CP048627.1\|WP_008537378.1\|1692363_1694526_+\|penicillin-binding-protein-1A	unknown	unknown	gnl\|CDD\|273955
NZ_CP048627.1\|WP_039881349.1\|1674682_1675969_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP048627.1\|WP_008537390.1\|1678538_1679357_+\|type-III-pantothenate-kinase	unknown	unknown	gnl\|CDD\|237347
NZ_CP048627.1\|WP_008537396.1\|1673508_1674576_-\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_CP048627.1\|WP_008537377.1\|1694559_1695777_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_CP048627.1\|WP_008537385.1\|1684882_1685167_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048627.1\|WP_008537384.1\|1685193_1686879_-\|DUF4127-family-protein	unknown	unknown	gnl\|CDD\|379257
NZ_CP048627.1\|WP_008537379.1\|1689928_1692298_+\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|234750
NZ_CP048627.1\|WP_008537391.1\|1677537_1678518_+\|biotin--[acetyl-CoA-carboxylase]-ligase	unknown	unknown	gnl\|CDD\|237010

Protein	Function_ID	Function_description	E-value
NZ_CP048627.1\|WP_008537387.1\|1681603_1682869_+\|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	gnl\|CDD\|225428	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism].	0
NZ_CP048627.1\|WP_008537386.1\|1684261_1684861_-\|lysine-exporter-LysO-family-protein	gnl\|CDD\|377175	pfam03956, Lys_export, Lysine exporter LysO. Members of this family contain a conserved core of four predicted transmembrane segments. Some members have an additional pair of N-terminal transmembrane helices. This family includes lysine exporter LysO (YbjE) from E. coli.	1.48631e-61
NZ_CP048627.1\|WP_008537388.1\|1680621_1681428_+\|DUF368-domain-containing-protein	gnl\|CDD\|377196	pfam04018, DUF368, Domain of unknown function (DUF368). Predicted transmembrane domain of unknown function. Family members have between 6 and 9 predicted transmembrane segments.	1.29125e-42
NZ_CP048627.1\|WP_008537382.1\|1687037_1687304_+\|cell-division-protein-ZapA	gnl\|CDD\|377476	pfam05164, ZapA, Cell division protein ZapA. ZapA is a cell division protein which interacts with FtsZ. FtsZ is part of a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the bacterial cell cycle. The interaction of FtsZ with ZapA drives its polymerization and promotes FtsZ filament bundling thereby contributing to the spatio-temporal tuning of the Z-ring.	1.72777e-11
NZ_CP048627.1\|WP_008537380.1\|1687419_1689903_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	2.56458e-116
NZ_CP048627.1\|WP_008537389.1\|1679353_1680310_+\|tRNA-dihydrouridine-synthase-DusB	gnl\|CDD\|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	3.23421e-127
NZ_CP048627.1\|WP_008537392.1\|1676931_1677279_-\|ASCH-domain-containing-protein	gnl\|CDD\|119344	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation.	5.18531e-08
NZ_CP048627.1\|WP_008537376.1\|1696061_1696793_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|234640	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator.	1.30414e-146
NZ_CP048627.1\|WP_008537393.1\|1676042_1676492_-\|dUTP-diphosphatase	gnl\|CDD\|184417	PRK13956, dut, dUTP diphosphatase.	1.99535e-51
NZ_CP048627.1\|WP_008537397.1\|1673079_1673304_-\|ferrous-iron-transport-protein-A	gnl\|CDD\|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	4.12914e-19
NZ_CP048627.1\|WP_008537378.1\|1692363_1694526_+\|penicillin-binding-protein-1A	gnl\|CDD\|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP048627.1\|WP_039881349.1\|1674682_1675969_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP048627.1\|WP_008537390.1\|1678538_1679357_+\|type-III-pantothenate-kinase	gnl\|CDD\|237347	PRK13318, PRK13318, type III pantothenate kinase.	9.78422e-143
NZ_CP048627.1\|WP_008537396.1\|1673508_1674576_-\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_CP048627.1\|WP_008537377.1\|1694559_1695777_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_CP048627.1\|WP_008537375.1\|1696861_1697458_+\|nitroreductase-family-protein	gnl\|CDD\|380317	cd02140, Frm2-like, nitroreductase family protein. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	7.36163e-85
NZ_CP048627.1\|WP_008537384.1\|1685193_1686879_-\|DUF4127-family-protein	gnl\|CDD\|379257	pfam13552, DUF4127, Protein of unknown function (DUF4127). This family of uncharacterized bacterial proteins are about 500 amino acids in length.	2.37188e-134
NZ_CP048627.1\|WP_008537379.1\|1689928_1692298_+\|endonuclease-MutS2	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_CP048627.1\|WP_008537391.1\|1677537_1678518_+\|biotin--[acetyl-CoA-carboxylase]-ligase	gnl\|CDD\|237010	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA.	2.91876e-88

>NZ_CP048627.1|WP_008537387.1|1681603_1682869_+|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase
MKDATKCLHSGYSPKNTEPRVMPIVQSTTYVYDSTDDVAAVFDEPTKSLIYSRFANPTVMAVENKIADLEGGVGAMCTTSGQAANLLAILNICNAGDSFISTTQIYGGTVNLFAFTLKKLGIECIFVGHDATDEEIHAAFKPNTKAVFGETLANPALTVFDIERYANIAHAHGVPLIVDNTFATPILCKPFEFGADIVTHSTSKYMDGHALQIGGVIVDSGNFNWDNGNFPELVEPDPSYHGLSYTKTYGKQAYILKARMQLMRDFGCYPAAHSAFLLNLGLETLPVRMKQYCENALTVAKYLESNDKVESVMYPALESNESYPLAKKYLKGCSGVITFVIKGGKENAVKFMDSLKLASNEVHVADIRTCVLHPASETHRQLTDEQLEAAGINSGMVRFSVGLEDINDILDDLKQAFANVK
>NZ_CP048627.1|WP_008537388.1|1680621_1681428_+|DUF368-domain-containing-protein
MRNYVVTFAKSLVVGSTMLVPGVSGGSMAMILGIYTKLISSVSSFMKNKFRNSLFLTIFLAGSLIGIVSFSKPILHLIETYPMPMLYFFMGAVAGSVPLMFREAKLTKFSWTVPIYVAIGFLIVLFFEMSPISNVTTNDATNWYTYLLLVVAGFIAAIALVLPGISVSYMLLLMGLYDETMRAASEFYLPFLIPLGFGLVVGILLTTKLLENLMQNYPQPTFLIILGFILGSILELYPGIPQNEEIFICALTLILGFGIIKYISSKDV
>NZ_CP048627.1|WP_008537389.1|1679353_1680310_+|tRNA-dihydrouridine-synthase-DusB
MKIGNLEITTPVFLAPMAGVTDTAYCILAQRMGCGLVYSEMVSDQGINFRNERTLEMLKTVPEQRPLAIQLFSGNPERMYKAASFVASLNCCDMIDINMGCPAPKIVRNSEGSALMKDPVLAYEIMCATREAVKDMPVTVKMRKGWDSEHCNVVEMAGLAQKAGLDAIAVHGRTREEFYRGHADWDIIREVKQAVDIPVIGNGDVRTCQDLKNIFEHTGCDAVMIGRGAQGNPWIFRRFKEFLFTGVDPGEPSIDERKQVILEHLDMLLKWKGDYIGPREMRKHATWYTHGLYGSASLRQKFNSAVCREDFVKILNDM
>NZ_CP048627.1|WP_008537390.1|1678538_1679357_+|type-III-pantothenate-kinase
MLLVFDIGNSNIVMGAYDGKKLYRHWRISTDRQKTGDEYGMLINELFRFQGMDMNDIDDIIISSVVPPLVIPISKMCERYFKIKPLLVGPGIKTGIRLVYENPRLLGADRIVNVVGAFEQYGGPLIVIDIGTATTFDVVNDKGDFLGGVIAPGIGMSADALFQKAANLPRIELVTPKNVICHNTITNMQSGIIYGAVGQIDGIVNRIKKEYGKDMTVIATGGLARMIAEESSTIDKTDHFLTLTGLRVLYERNAASRKGYLERLKNKPSNNL
>NZ_CP048627.1|WP_008537391.1|1677537_1678518_+|biotin--[acetyl-CoA-carboxylase]-ligase
MRSQILNLLKQNGNKFLSGEYLADTLKVSRTAIWKHIKALRDNGYNIESVPRSGYRLIDSPDLLSSEEIKSSLTTKILGSEILYFETVDSTNTQAKKVALQGVKDGTIIISEEQGGGRGRLSRSFFSPKYKGIWFSVILKPKFLPQEAPKCTLMAATAITKAIEDVTGVKVGIKWPNDVLYEGKKLVGILTEMNAEMDCINYIIIGMGINVNIDKEEMPEEIQNIATSLSQITGKKISRLKLLNKILYYLEHLYIICQEEGFAPILDEWRKYSITLNQHIRVIGTNEVLEGIAVDIDDDGALLVNIDGQIKRVLAGDVSIRPVQNR
>NZ_CP048627.1|WP_008537392.1|1676931_1677279_-|ASCH-domain-containing-protein
MMMALNFQAKKHEELIMSRKKNCTVRLGDVRSQYPESSIVWITTGKKYEVKKRLYTAIIDKVRVKKFAELTSKDLGHQNPEIDSLEELRLDFENIYQRRITLDDTVTVIYFSEVL
>NZ_CP048627.1|WP_008537393.1|1676042_1676492_-|dUTP-diphosphatase
MRNRGFEIVSDFKDKYINLPTRKTSKSAGYDIEAAEDKIIKAGQMAVIATGLKAYMQDDEYLGIHIRSSLAFKKNLNLVNSQGVIDADYYNNEDNEGHIMIGLINFGDEDVEITKGMRIAQAIFYKFLTIDDEKNVDTIRSGGFGSTGE
>NZ_CP048627.1|WP_039881349.1|1674682_1675969_-|replication-associated-recombination-protein-A
MDEDYRPLAERMRPRNFDEYIGQEKILGKKSFLRRMVQEDKIPSMILYGPPGTGKTTLAKMIAGMTKSEFSRLNAVSAGISDVRKIIEKADENRRYYRKRTIIFLDEIHRFNKAQQDVLLPYVEDGRIILIGATTENPYFEVNHALLSRVRVVKLELLDEQNLIDILKIALEDKVRGLGKYKFKYDDEILSIIAQYAGGDARVALNILEQAGDVALEQNHNINKEIIESIISEKIQTYDKNGDNHYDIVSAFIKSMRGSDPDAALHYLARMLVAGEDINFIARRIAICASEDVGNADPQALVLAMATVQAVQFLGMPEARIPLAQAVTYIASAPKSNASYLAIDKAIEQVKSQDCGQVPIHLRDCHYKGAKKLGHGVDYKYAHDYPYHIVKQQYLPDKIKNAKYYMPTSNGYEEKIGRYMQFCEKIKA
>NZ_CP048627.1|WP_008537396.1|1673508_1674576_-|tRNA-2-thiouridine(34)-synthase-MnmA
MKKKVAVAMSGGVDSSLTAALLIEQGYDVIGVTMTLSDESREAGGSTAVSDAKKVADELNIPHYVVNYHKKFKDDVIKYFISEYAKGRTPNPCVRCNNTVKFGSLLKDCLELGADCVATGHYARIEQDEKTGRYLLKKGLDVRKDQSYVLYTLTQDVLKHFMLPLGNYSKEKTRELAGKMNLPVANKPESQEICFIPNDDYKAYLKAKAPHILKPGDIVDVNGNKLGRHEGVPLYTVGQRKGLGIAAAHPLYVVGLDVKRNHVIVGENKDVFAKGLVAKDLNFITRDDFTEKFVTTAKIRYGAKECECTVEPLDNGNLAKILFSEPQRAITPGQSVVFYEDEIVGGGGVIKNIIR
>NZ_CP048627.1|WP_008537397.1|1673079_1673304_-|ferrous-iron-transport-protein-A
MTLKEAKPGMVVKVESIEASELKERLMSMGMVKGTKVKVLRSAPLGDPIAISIRSFNMSIRLSDAAKIAVTQIA
>NZ_CP048627.1|WP_008537386.1|1684261_1684861_-|lysine-exporter-LysO-family-protein
MVYIALCALILGIIFGQFVLDSTWHDLCSELADYVLYLLMFSVGISVGMNESIIEKIKNYNLTILLIPIGVIIGSVFGGFICSYIFDMNLVYSLSIGASMGWYSLSGVMLESLANAQIGTIAFLSSLMREFIAFMMIPVLVKYLNTFAAIGAAGATSEDSTLPMLIKYSSEEFIIISVINGVLCSVAVPILINFFFSTL
>NZ_CP048627.1|WP_008537385.1|1684882_1685167_-|hypothetical-protein
MVETLIMVLGVIAGFSLLKVKEHRRIAVVNLNNKVQLIAVALIIFIMGINLGSMEDFAHKMLTMGLQSLVFAIIPTVFSVIIVYIFSKLFIVKI
>NZ_CP048627.1|WP_008537384.1|1685193_1686879_-|DUF4127-family-protein
MKFKSYIKQKWLLSIIAVTLMIVYYMNFIQLPPAVSVELQQNYKYKLILIPLDTRPPCQKMVVDAGKMAGVQIITPPSEIMDYYTKEGDTKKIQKWLMDNIDKSDGVIVSIDQLLHGGLLASRESGTKQDESQILLNFMRDLKTKAKDKPIYAFNVLPRITPPPTLESDSKKMIKISRLIDEISIFENEDDIKLLADLKEDIKQEDLDIYLDLFRRNTALNKELINLAKKGIITKLVIGQDDGEDFGIPNMEKKSLINYVHSLGISNDVVMITKGADEVALSLLANFVQTKTNYQPKVYVEYNDEKAMRTVMPFMAGSVGSTVEEKLVMANAKKVNSPQEAGLILYVFIGNDENMSIQRQSALKIKKYLEQGKKVALVDLSKHFSANEVLFPTLLKEAVPINELTSYAGWNTASNSIGTALANAVIYKAIRPTFNTTNDMLAVEYNRLNINYERFLEDYYYLKEVIDVMNITLKNHGYENVNDLDMEHNYIWMNKLLQSDMQKRANQLNNSEVFKMPFKVQTPEGVFDLTIRNLQVDVFFPWPRTFEVYLDVRLNLYRLNN
>NZ_CP048627.1|WP_008537382.1|1687037_1687304_+|cell-division-protein-ZapA
MNNKVTVEILGVKYPLRYSKDSDINDIQEAAKIVDENIRLMTKQNQYLPPDRVAVLTALQIAEQLIRLKKDYNEFWDILDENRSNKHK
>NZ_CP048627.1|WP_008537380.1|1687419_1689903_+|U32-family-peptidase
MIELLAPAGSMEALKAAVESGADAIYLSGKMFGARAYANNFDEQGLKEAIEFAHLRNVKIHVTVNTLVDNSEIPALADYFRFLYEIGADAVLVQDLGAARLAQLVAPDLPLHASTQMTVNNLAGVLALQELGFSRVVLSREVTLKDIIHICRNSDVEIEVFAHGALCVCYSGQCLMSSMIGGRSGNRGRCAQPCRLPYTLVDKNNNNVLKDAGQYLLSPRDMNTLELIPEFIEAGVVSLKLEGRMKKPEYVAVVVDAYRQKINSYYSHTELQEDIQKNLSQIFNRDFTTAYLEKKQGKFMMSDKRPNNRGRLVGRVIRYDDNKRQAIMKLTDDVNIGDTIDFWVKVGGRVSTNVSKIIYKNKEITSASAGMEVIIPVPNRVHPHDRIFKVFDANLMQKARSYYTSASPIRKINLNIEAIAKLNEPFILKATDEDGYSAQITSDFLVETALKRAMDKSTVQKQMERLGNTIYQLENLSCTIDENVIVPMSVMNDTRRLLIEKLMSMRLEAYHRPQIAKIDNTIWQQDLASKSFNQTNKPQLVVAVDTIAKVQTAIDNQADIVLFGGESYNHQFITAEMYAEATRLCREANIKIAFATPRIMRDNEQTAFTNWLTKIKDIAPDMIYAHTLAEMYLIKQFTDITIWADFSFNVYNDVTLTFLNNYDIKGATVSPELNFKQIKTLNEASTLPLECIVHGNMELMVSEYCVLGSFLGNLDKGTCTKPCEKNNYWLCDRKNEKFPIVTDQYCHMHLLNAKELNMLAHVPEFSNLHIDRIRLDGRYMSKEKLAKFTKLYKEIIIEGKNHLALMPENITKYEQNITRGHYFRGVE
>NZ_CP048627.1|WP_008537379.1|1689928_1692298_+|endonuclease-MutS2
MNQSVFKTLEYAKIITMLQNMATSSMGKELAEKLLPSSDIDEVIENLSHTQEASNILISSEPPFGGIHDIRSLLKKTSLGLVIEINSLLDILNTMYAMRNLKKFFKELEIDSPQFKEWAKSIEILGQLEREIDNIVDEHGSMRDSASVELMRIRREIKSSQRRIKTNLDGILKNPDYQKYFQDNIVTIRDERYVIPIKQEYRQQFPGVVHDQSSSGSTLFIEPMSIVDLNNDIKQLVIDEKREIERILKVISEKIARNADSLLHNCEIMAQLDFAFAKAKLARKMHATMPEINDEGIVNLAKARHPLLNKDNVVPIDIRLGEGYRTLLITGPNTGGKTVSMKTLGLLVLMTQSGLFIPVQSGSKISIFQNVYADIGDEQSIEQSLSTFSAHMRNIVNILNNIEHDDLLLLDEVGSGTDPEEGAALAMSILERLMDIGACTVATTHYNELKTFAYSKEGIENACVEFDIKSLRPTYRLLIGTPGASNAFAISKRLGLSDTLILRAQQLIKADHAQFENVLNTLENEKLMYEQKNADIAERQQRIEKLEKQLADMKQEMAKKKEQTLRKTKEQCASLLRRTRRESEEIIKELKAQFNDQGMKKRQETIDAARHKLRGRLDKVSQQNDDPNKPGEAVDIKTIAVGDIVYVNKLRQKGTITDISGKELTVQLGSLKMNVKAKDCSFVSHAVKVKETAPSKKAGGFNMLAKVSQISTEVDIRGLMVDEAIEVVSKYLDDAVISGLSRVLIIHGKGTGALRKGIQEYLKNHRNVLSYTLGDMDEGGSGVTAVKLK
>NZ_CP048627.1|WP_008537378.1|1692363_1694526_+|penicillin-binding-protein-1A
MNKQPFNEKKSTSNHTTDKKNKKKSFGFKKFFLALLTLFIVVFLGVGCGLVAIGLDGDKDVSDIHPPASSQILDMNGNLITNIHATENRTLVTLDKIPANLQNAFIAVEDNRFYEHNGIDPRGIFRAIYSNLTSGEVAEGGSTITQQLAKNAFLSQDRTFKRKIQEFFIALRLERQYTKEEILEMYLNQIYFGRGAYGVQAAAQTYFGKDVSQLDLSECAMLAGIPRSPNYYSPLNNLGAANERKAEVLDQMVKYGYIDSTTAAKTKAESLRLVNPKEQENDNTASYFIDYVTQEMIDKFGADAVYKEGLKIYVSIDMNMQKAAEQSVNSLLPTYYNDANGLTQPQGALVAIDPKTGYIKAMVGGRGTDQFNRAVLAVRQPGSAFKPFTFATALENKMTPDTTIEDKPFKLGDWQPQNYDRTFRGTVSMRQTAINSLNIPTIRLAEKLSIDKVLLTAQNLGISTLELNSKDANDKNLAASIGGLTNGVTVLDMAGAYSAFANHGVYTKPTAIVKVVDRKGKTIYEHTPETKQVLSERTATLLTDMLEDVITKGTGKAANINRPAAGKTGTTDNYQDAWFAGYTPDLVTVVWMGCDDNDVMPGITGGTTPAKIWQNFMKTALASIPAKNFDGSDTSIDNPVQNVESNAKTTAKDVSHEKEKPSKEAPDKQKPVHNEQSNPNDAQQPIDENEPIEENIEQPSLPAPRQNLPEPSIQQGKGLN
>NZ_CP048627.1|WP_008537377.1|1694559_1695777_+|tyrosine--tRNA-ligase
MSVFDTLKERGYLAQVTHEEELKKALETEQVTFYMGFDPTADSLHVGHFLALMAMSHMQKAGHRPICLVGGGTGTVGDPSGRTDMRKMLTDEDIEHNCNCFKKQMERFIDFSDGKALMINNGDWLRKLNYIELLRDVGPHFSVNRMLTAECYKQRLERGLTFLEFNYMIMQAYDFMELNRRYGCVLELGGDDQWSNIIAGVELIRRKEAKPSYGMTFNLLTNSEGKKMGKTAKGALWLDPEKTSPYDFYQYWRNVADSDVEKCLALLTFLPMDEVRRLGSYKDQKINEAKQVLAYEVTKLVHGEEEAKKAQEAAQALFSGKGNMDNAPTITITEADFGKKLLDILVDNKVFESKGAGRRLIAQNGVSIGDDKWTDVEKVLTAEDLANGDMIVRKGKKKFYRLIKA
>NZ_CP048627.1|WP_008537376.1|1696061_1696793_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MSGHSKWANIKRKKGANDAIRAKMTTKIGREITIAVRMGGADPTGNMRLKLALSKAKSNNIPKDNINRAIQKGLGASDGSNYEELIYEGYGPAGSAVMLEVMTDNRNRTAADIRHLFSKYGGNLGETGCVGWMFHKKAIFVVDKEAFDDEESLMMIALDAGAEDFKAEDDSFEITAAPEDFDAISQALEENNIETVESEITMIPDTTVKVEGKDAEKMQTLIDMLEEHDDVQNVYSNYEMDEE
>NZ_CP048627.1|WP_008537375.1|1696861_1697458_+|nitroreductase-family-protein
MEFLQALKNRRSIYNLGTNVNLSNEEITSIISDCLKYSPSAFNYPTTNVIIAFGEKHQQIWQITTDILKGKLAKKEETFAVAQNKINKFKAGVGTILFFEDTEIINELKETYAMYAENFSTWSNQANGMLQNNIWTALSQANIGANLQHYNPLIDDKIKELFSIPDTWKLTAQMPFGSIEAQPNEKYIEDISTRLKIY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048627_5	5.2\|1182175\|29\|NZ_CP048627\|PILER-CR	1182175-1182203	29	NC_049510	Erwinia phage phiEaP-8, complete genome	5351-5379	5	0.828
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	14480-14511	7	0.781
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM359505	Prochlorococcus phage P-TIM68, complete genome	166277-166308	7	0.781
NZ_CP048627_8	8.3\|1683231\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683231-1683264	34	NZ_CP009366	Yersinia enterocolitica strain WA plasmid unnamed, complete sequence	42689-42722	7	0.794
NZ_CP048627_8	8.3\|1683231\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683231-1683264	34	NC_005017	Yersinia enterocolitica 8081 plasmid pYVe8081, complete sequence	54871-54904	7	0.794
NZ_CP048627_8	8.3\|1683231\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683231-1683264	34	NC_004564	Yersinia enterocolitica plasmid pYVa127/90, complete sequence	56903-56936	7	0.794
NZ_CP048627_8	8.3\|1683231\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683231-1683264	34	NC_019234	Yersinia enterocolitica (type O:8) plasmid pYV-WA314, complete sequence	57157-57190	7	0.794
NZ_CP048627_8	8.3\|1683231\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683231-1683264	34	NC_008791	Yersinia enterocolitica subsp. enterocolitica 8081 plasmid pYVe8081, complete sequence	54872-54905	7	0.794
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	NZ_CP040783	Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence	15496-15529	7	0.794
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	NC_014502	Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence	166982-167015	7	0.794
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_MG100202	Acinetobacter baumannii strain Ab825 plasmid pAb825_36, complete sequence	22802-22835	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_KY984045	Acinetobacter baumannii pAb242_9 plasmid,complete sequence	2291-2324	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	CP042208	Acinetobacter baumannii strain DS002 plasmid pTS11291, complete sequence	9378-9411	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_MK323042	Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_a, complete sequence	17825-17858	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_MG520098	Acinetobacter baumannii strain Ab244 plasmid pAb244_7, complete sequence	5771-5804	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_MG954376	Acinetobacter baumannii strain SGH9601 plasmid pS21-1, complete sequence	10568-10601	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	MK531541	Acinetobacter baumannii strain MC75 plasmid pMC75.2, complete sequence	11345-11378	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP035050	Acinetobacter baumannii strain ABUH773 plasmid p11.8Kbp, complete sequence	9282-9315	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP035044	Acinetobacter baumannii strain ABUH796 plasmid p13.0Kbp, complete sequence	10425-10458	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP035053	Acinetobacter baumannii strain ABUH763 plasmid p11.0Kbp, complete sequence	8440-8473	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP041589	Acinetobacter baumannii strain J9 plasmid pJ9-2, complete sequence	8583-8616	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP044454	Acinetobacter indicus strain MMS9-2 plasmid pMMS9-2-4, complete sequence	2638-2671	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP033871	Acinetobacter baumannii strain MRSN15313 plasmid p597A-14.8, complete sequence	12444-12477	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP042560	Acinetobacter baumannii strain E47 plasmid pE47_004, complete sequence	5188-5221	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP033751	Acinetobacter baumannii strain FDAARGOS_540 plasmid unnamed3	2825-2858	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP044358	Acinetobacter baumannii strain CAM180-1 plasmid pCAM180B, complete sequence	13852-13885	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	CP031745	Acinetobacter baumannii WM99c plasmid pWM99c-1, complete sequence	8583-8616	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	CP046598	Acinetobacter indicus strain FS42-2 plasmid pFS42-2-3, complete sequence	10072-10105	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_KM051986	Acinetobacter baumannii strain D72 plasmid pD72-1 clone GC2; global clone 2, complete sequence	8583-8616	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	MN266872	Acinetobacter baumannii plasmid pAC1-BRL, complete sequence	8272-8305	8	0.765
NZ_CP048627_3	3.15\|773432\|34\|NZ_CP048627\|PILER-CR,CRT	773432-773465	34	NZ_CP035048	Acinetobacter baumannii strain ABUH793 plasmid p10.9Kbp, complete sequence	8440-8473	8	0.765
NZ_CP048627_4	4.3\|957893\|35\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	957893-957927	35	MH791414	UNVERIFIED: Aeromonas phage Aswh_1, complete genome	23847-23881	8	0.771
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LN881734	Escherichia phage slur11, complete genome	2853-2884	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	AP018814	Enterobacteria phage T6 DNA, complete genome	13140-13171	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN895435	Escherichia phage teqhal, complete genome	26125-26156	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MG781191	Escherichia phage vB_EcoM-fHoEco02, complete genome	13148-13179	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT764206	Escherichia phage JEP6, complete genome	87022-87053	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN895437	Escherichia phage teqskov, complete genome	4458-4489	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN716856	Yersinia phage vB_YepM_ZN18, complete genome	67138-67169	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KY290975	Escherichia phage YUEEL01, complete genome	12497-12528	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_019399	Enterobacteria phage vB_EcoM_ACG-C40, complete genome	12903-12934	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM606997	Enterobacteria phage RB7, complete genome	13669-13700	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LN881736	Escherichia phage slur14, complete genome	121791-121822	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN693026	Marine virus AFVG_117M72, complete genome	59993-60024	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KU925172	Escherichia phage PE37, complete genome	151133-151164	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MH051915	Enterobacteria phage vB_EcoM_IME339, complete genome	153618-153649	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT682713	Escherichia phage vB_EcoM_Ozark, complete genome	13261-13292	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK327937	Escherichia phage vB_EcoM_G10400, complete genome	13356-13387	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_042129	Escherichia phage slur03, complete genome	157858-157889	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MH809535	Yersinia phage PYPS2T, complete genome	89258-89289	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_042077	Shigella phage Sf21, complete genome	12871-12902	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LN881732	Escherichia phage slur07, complete genome	149424-149455	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN508618	UNVERIFIED: Escherichia phage ES26, complete genome	120175-120206	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT884006	Escherichia phage vb_EcoM_bov9_1, complete genome	13359-13390	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM607002	Enterobacteria phage RB55, complete genome	13457-13488	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KY608967	UNVERIFIED: Escherichia phage CF2, complete genome	145475-145506	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MF001354	Salmonella phage SG1, partial genome	126359-126390	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT176425	Citrobacter phage PhiZZ23, complete genome	13316-13347	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MF327009	Shigella phage Sf25, complete genome	107354-107385	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN580668	Salmonella phage pSe_SNUABM_01, complete genome	13913-13944	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK373781	Escherichia phage vB_EcoM_KAW1E185, complete genome	13255-13286	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_025829	Shigella phage pSs-1, complete genome	18966-18997	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LN881737	Escherichia phage slur13, complete genome	24674-24705	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LR597657	Escherichia phage T4_ev240 genome assembly, chromosome: 1	13354-13385	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_030953	Shigella phage SHFML-11, complete genome	129574-129605	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN508614	UNVERIFIED: Escherichia phage ES12, complete genome	119824-119855	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KJ477684	Enterobacteria phage T4 strain wild, complete genome	13479-13510	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MG781190	Escherichia phage vB_EcoM-fFiEco06, complete genome	13148-13179	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LR215723	Yersinia phage fPS-90 genome assembly, chromosome: I	13708-13739	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MH550421	Enterobacteria phage T6, complete genome	13143-13174	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM606996	Enterobacteria phage RB6, complete genome	13669-13700	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	AP018932	Escherichia phage KIT03 DNA, complete sequence	13366-13397	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_025448	Enterobacteria phage RB27, complete genome	13669-13700	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	HM137666	Enterobacteria phage T4T, complete genome	13479-13510	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KP869105	Escherichia coli O157 typing phage 7, partial genome	32016-32047	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MF158046	Shigella phage Sf23, complete genome	103125-103156	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT884007	Escherichia phage vb_EcoM_bov10K1, complete genome	13359-13390	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN022785	Escherichia virus VEc20, complete genome	13103-13134	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_000866	Enterobacteria phage T4, complete genome	13493-13524	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT682714	Escherichia phage vB_EcoM_Lutter, complete genome	12920-12951	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LR746311	Shigella phage vB_SsoM_113 genome assembly, chromosome: 1	57080-57111	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK962750	Shigella phage CM8, complete genome	13111-13142	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MH553563	Enterobacteria phage RB18, complete genome	13335-13366	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN895436	Escherichia phage teqsoen, complete genome	164922-164953	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM606995	Enterobacteria phage RB5, complete genome	13669-13700	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MF001359	Escherichia phage EC121, partial genome	13145-13176	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT682710	Escherichia phage vB_EcoM_FT, complete genome	121641-121672	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MG775043	Citrobacter phage vB_CroM_CrRp10, complete genome	156707-156738	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN781580	Shigella virus KRT47, complete genome	13732-13763	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LN881726	Escherichia phage slur02, complete genome	84794-84825	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK373785	Escherichia phage vB_EcoM_OE5505, complete genome	13377-13408	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MH992121	UNVERIFIED: Escherichia phage MLF4, partial genome	144526-144557	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT682712	Escherichia phage vB_EcoM_F1, complete genome	13438-13469	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK373779	Escherichia phage vB_EcoM_G9062, complete genome	13134-13165	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KR269718	Escherichia phage HY03, complete genome	110872-110903	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT179807	Escherichia phage vB_EcoM_IME537, complete genome	89055-89086	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN508616	UNVERIFIED: Escherichia phage ES19, complete genome	118584-118615	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KJ477686	Enterobacteria phage T4 strain GT7, complete genome	13479-13510	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT446387	UNVERIFIED: Escherichia virus TH09, complete genome	143472-143503	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK327946	Escherichia phage vB_EcoM_G4507, complete genome	13367-13398	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK327944	Escherichia phage vB_EcoM_G2540-3, complete genome	12895-12926	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	FJ839692	Enterobacteria phage RB14, complete genome	13152-13183	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KX452694	UNVERIFIED: Escherichia phage KPN1 genomic sequence	5850-5881	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MH355584	Escherichia phage vB_EcoM_JB75, complete genome	154037-154068	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LC465543	Shigella phage SfPhi01 DNA, complete sequence	33683-33714	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM606994	Enterobacteria phage RB3, complete genome	13669-13700	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK977694	Escherichia phage vB_EcoM-Sa45lw, complete genome	13351-13382	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KX130862	Shigella phage SHFML-26, complete genome	79652-79683	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KU867876	Escherichia phage vB_EcoM-UFV13, complete genome	13333-13364	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK327929	Escherichia phage D5505, complete genome	13134-13165	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK327936	Escherichia phage vB_EcoM_G2540, complete genome	13134-13165	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_031030	Escherichia phage UFV-AREG1, complete genome	13586-13617	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN508617	UNVERIFIED: Escherichia phage ES21, complete genome	118599-118630	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	FJ839693	Enterobacteria phage RB51, complete genome	13751-13782	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM607004	Enterobacteria phage RB68, complete genome	13751-13782	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN994497	Phage NBEco003, complete genome	153196-153227	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK962755	Shigella phage JK38, complete genome	13319-13350	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MH243439	Escherichia phage vB_EcoM_NBG2, complete genome	12917-12948	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK327945	Escherichia phage vB_EcoM_G4500, complete genome	13134-13165	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MF001360	Escherichia phage ECO4, partial genome	24564-24595	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KJ477685	Enterobacteria phage T4 strain 147, complete genome	13479-13510	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KT184311	Enterobacteria phage GiZh, complete genome	63217-63248	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK886800	Escherichia phage EcNP1, complete genome	158340-158371	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LR215724	Yersinia phage fPS-65 genome assembly, chromosome: I	13126-13157	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK327940	Escherichia phage vB_EcoM_G29, complete genome	13134-13165	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LN881733	Escherichia phage slur08, complete genome	155105-155136	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	AP011113	Enterobacteria phage AR1 DNA, complete genome	13344-13375	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK373786	Escherichia phage vB_EcoM_R5505, complete genome	13254-13285	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT176424	Citrobacter phage PhiZZ6, complete genome	13329-13360	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_027404	Yersinia phage PST, complete genome	13143-13174	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_008515	Bacteriophage RB32, complete genome	12904-12935	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK962752	Shigella phage JK23, complete genome	13136-13167	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KT184312	Enterobacteria phage Kha5h, complete genome	38303-38334	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	HE956711	Yersinia phage phiD1 complete genome	13327-13358	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MG867727	Escherichia phage vB_EcoM-G28, complete genome	13102-13133	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KF925357	Escherichia phage HY01, complete genome	13582-13613	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KR233165	Escherichia phage PEC04, complete genome	55682-55713	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_015457	Shigella phage Shfl2, complete genome	13035-13066	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM607001	Enterobacteria phage RB33, complete genome	13023-13054	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LC348379	Escherichia phage PP01 DNA, complete sequence	13544-13575	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK327942	Escherichia phage vB_EcoM_G50, complete genome	13954-13985	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK327928	Escherichia phage vB_EcoM_G2133, complete genome	13406-13437	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MT176426	Serratia phage PhiZZ30, complete genome	13343-13374	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KX452698	UNVERIFIED: Shigella phage KPN5 genomic sequence	183203-183234	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NC_031085	Shigella phage SHBML-50-1, complete genome	14488-14519	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KT184308	Enterobacteria phage Aplg8, complete genome	126337-126368	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MK373787	Escherichia phage vB_EcoM_G8, complete genome	12902-12933	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LR597660	Escherichia phage T4_ev151 genome assembly, chromosome: 1	12963-12994	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MN895434	Escherichia phage teqhad, complete genome	18503-18534	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	MH992510	Escherichia phage vB_EcoM_DalCa, complete genome	13141-13172	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM607003	Enterobacteria phage RB59, complete genome	13457-13488	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	LN881729	Escherichia phage slur04, complete genome	166478-166509	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	HM997020	Escherichia phage wV7, complete genome	13324-13355	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	JN202312	Enterobacteria phage ime09, complete genome	13770-13801	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM606999	Enterobacteria phage RB10, complete genome	13669-13700	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	M30001	Bacteriophage T4 CTPase, small outer capsid protein (soc), mrh.2, mrh.1, rpoH modulating protein (mrh), dda.9, dda.8, dda.7, dda.6, modA.1, modA and dda.2 genes, complete cds	3709-3740	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KM606998	Enterobacteria phage RB9, complete genome	13669-13700	8	0.75
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	KC847113	Bacillus phage PBP180, complete sequence	23435-23466	8	0.75
NZ_CP048627_7	7.4\|1613318\|32\|NZ_CP048627\|PILER-CR	1613318-1613349	32	CP023136	Klebsiella pneumoniae subsp. pneumoniae strain KpvK54 plasmid	29470-29501	8	0.75
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	MT774394	CrAssphage cr271_1, complete genome	60754-60787	8	0.765
NZ_CP048627_4	4.6\|958089\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	958089-958122	34	LC081338	Vibrio sp. 04Ya108 plasmid pSEA1 DNA, complete genome	192433-192466	9	0.735
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	AP014335	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C6, * SEQUENCING IN PROGRESS *	5319-5350	9	0.719
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	460774-460807	9	0.735
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	MH356730	Staphylococcus phage VB-SauS-SA2, complete genome	12596-12629	9	0.735
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	AP019522	Staphylococcal phage MR003 DNA, complete genome	111492-111525	9	0.735
NZ_CP048627_2	2.3\|653134\|35\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	653134-653168	35	MN856107	Bacteriophage sp. isolate 216, complete genome	4402-4436	10	0.714
NZ_CP048627_4	4.5\|958024\|35\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	958024-958058	35	HG796344	Uncultured bacterium plasmid pRGI00569	3364-3398	10	0.714
NZ_CP048627_4	4.14\|958618\|36\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	958618-958653	36	MN692951	Marine virus AFVG_117M12, complete genome	47104-47139	10	0.722
NZ_CP048627_5	5.1\|1182107\|32\|NZ_CP048627\|PILER-CR	1182107-1182138	32	NZ_CP026534	Bacillus velezensis strain DKU_NT_04 plasmid p1_DKU_NT_04, complete sequence	121942-121973	10	0.688
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	MF360958	Salicola phage SCTP-2, complete genome	304498-304531	10	0.706
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	NZ_CP014289	Bacillus thuringiensis strain Bt185 plasmid pBT1850046, complete sequence	38012-38045	10	0.706
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	NZ_KC683537	Bacillus pumilus strain 201005130501 plasmid pBP6000, complete sequence	5010-5043	10	0.706
NZ_CP048627_8	8.15\|1684013\|35\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1684013-1684047	35	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	561775-561809	10	0.714
NZ_CP048627_4	4.15\|958684\|37\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	958684-958720	37	NZ_CP033050	Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence	77043-77079	11	0.703
NZ_CP048627_7	7.4\|1613318\|32\|NZ_CP048627\|PILER-CR	1613318-1613349	32	NZ_CP045343	Vibrio sp. THAF190c plasmid pTHAF190c_e, complete sequence	33120-33151	11	0.656
NZ_CP048627_8	8.5\|1683359\|34\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683359-1683392	34	MH356730	Staphylococcus phage VB-SauS-SA2, complete genome	56940-56973	11	0.676
NZ_CP048627_8	8.6\|1683423\|36\|NZ_CP048627\|PILER-CR,CRISPRCasFinder,CRT	1683423-1683458	36	NC_019734	Crinalium epipsammum PCC 9333 plasmid pCRI9333.02, complete sequence	5202-5237	12	0.667

1. spacer 5.2|1182175|29|NZ_CP048627|PILER-CR matches to NC_049510 (Erwinia phage phiEaP-8, complete genome) position: , mismatch: 5, identity: 0.828

gcttgttttttccactaccaaaagacatt	CRISPR spacer
tgttgatttttacactaccaaaagacagt	Protospacer
  *** ***** *************** *

2. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 7, identity: 0.781

tttctggatttatatctataatatcttcctta-----	CRISPR spacer
tttctggatctacatctataatatc-----tagagat	Protospacer
*********.**.************     **

3. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 7, identity: 0.781

tttctggatttatatctataatatcttcctta	CRISPR spacer
atcctagatttgtatctataatatctccttca	Protospacer
 *.**.*****.**************.*.*.*

4. spacer 8.3|1683231|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009366 (Yersinia enterocolitica strain WA plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

tctggtgttttctttttccatgtt-gtatctgatt	CRISPR spacer
gctgtttttttctttttccatgttggtggctgag-	Protospacer
 *** * ***************** **. ****

5. spacer 8.3|1683231|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NC_005017 (Yersinia enterocolitica 8081 plasmid pYVe8081, complete sequence) position: , mismatch: 7, identity: 0.794

tctggtgttttctttttccatgtt-gtatctgatt	CRISPR spacer
gctgtttttttctttttccatgttggtggctgag-	Protospacer
 *** * ***************** **. ****

6. spacer 8.3|1683231|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NC_004564 (Yersinia enterocolitica plasmid pYVa127/90, complete sequence) position: , mismatch: 7, identity: 0.794

tctggtgttttctttttccatgtt-gtatctgatt	CRISPR spacer
gctgtttttttctttttccatgttggtggctgag-	Protospacer
 *** * ***************** **. ****

7. spacer 8.3|1683231|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NC_019234 (Yersinia enterocolitica (type O:8) plasmid pYV-WA314, complete sequence) position: , mismatch: 7, identity: 0.794

tctggtgttttctttttccatgtt-gtatctgatt	CRISPR spacer
gctgtttttttctttttccatgttggtggctgag-	Protospacer
 *** * ***************** **. ****

8. spacer 8.3|1683231|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NC_008791 (Yersinia enterocolitica subsp. enterocolitica 8081 plasmid pYVe8081, complete sequence) position: , mismatch: 7, identity: 0.794

tctggtgttttctttttccatgtt-gtatctgatt	CRISPR spacer
gctgtttttttctttttccatgttggtggctgag-	Protospacer
 *** * ***************** **. ****

9. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040783 (Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.794

atatga-tttttaactttttctattaaatcttcac	CRISPR spacer
-tatagttttttaattttttctaataaatcttgaa	Protospacer
 ***.. *******.******** ******** *

10. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NC_014502 (Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence) position: , mismatch: 7, identity: 0.794

atatgatttttaactttttctattaaatcttcac	CRISPR spacer
agatgatttttaacgttttctagtaaaagttgat	Protospacer
* ************ ******* ****  ** *.

11. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_MG100202 (Acinetobacter baumannii strain Ab825 plasmid pAb825_36, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

12. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_KY984045 (Acinetobacter baumannii pAb242_9 plasmid,complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

13. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to CP042208 (Acinetobacter baumannii strain DS002 plasmid pTS11291, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

14. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_MK323042 (Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_a, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

15. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_MG520098 (Acinetobacter baumannii strain Ab244 plasmid pAb244_7, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

16. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_MG954376 (Acinetobacter baumannii strain SGH9601 plasmid pS21-1, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

17. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to MK531541 (Acinetobacter baumannii strain MC75 plasmid pMC75.2, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

18. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP035050 (Acinetobacter baumannii strain ABUH773 plasmid p11.8Kbp, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

19. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP035044 (Acinetobacter baumannii strain ABUH796 plasmid p13.0Kbp, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

20. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP035053 (Acinetobacter baumannii strain ABUH763 plasmid p11.0Kbp, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

21. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP041589 (Acinetobacter baumannii strain J9 plasmid pJ9-2, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

22. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP044454 (Acinetobacter indicus strain MMS9-2 plasmid pMMS9-2-4, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

23. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP033871 (Acinetobacter baumannii strain MRSN15313 plasmid p597A-14.8, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

24. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP042560 (Acinetobacter baumannii strain E47 plasmid pE47_004, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

25. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP033751 (Acinetobacter baumannii strain FDAARGOS_540 plasmid unnamed3) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

26. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP044358 (Acinetobacter baumannii strain CAM180-1 plasmid pCAM180B, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

27. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to CP031745 (Acinetobacter baumannii WM99c plasmid pWM99c-1, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

28. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to CP046598 (Acinetobacter indicus strain FS42-2 plasmid pFS42-2-3, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

29. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_KM051986 (Acinetobacter baumannii strain D72 plasmid pD72-1 clone GC2; global clone 2, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

30. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to MN266872 (Acinetobacter baumannii plasmid pAC1-BRL, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaaaaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

31. spacer 3.15|773432|34|NZ_CP048627|PILER-CR,CRT matches to NZ_CP035048 (Acinetobacter baumannii strain ABUH793 plasmid p10.9Kbp, complete sequence) position: , mismatch: 8, identity: 0.765

tttaacctccaattctgttttacgcattaactca	CRISPR spacer
ttcaaagaataattctgtattacgtattaactca	Protospacer
**.**    .******** *****.*********

32. spacer 4.3|957893|35|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to MH791414 (UNVERIFIED: Aeromonas phage Aswh_1, complete genome) position: , mismatch: 8, identity: 0.771

gacactgaaaaatcaaattttgtaaaagtatttaa	CRISPR spacer
gaatatgaaaaatcattttttgtaaaagtataaag	Protospacer
**   **********  **************  *.

33. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LN881734 (Escherichia phage slur11, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
cgaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

34. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to AP018814 (Enterobacteria phage T6 DNA, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

35. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN895435 (Escherichia phage teqhal, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

36. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MG781191 (Escherichia phage vB_EcoM-fHoEco02, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

37. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT764206 (Escherichia phage JEP6, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

38. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN895437 (Escherichia phage teqskov, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

39. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN716856 (Yersinia phage vB_YepM_ZN18, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

40. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KY290975 (Escherichia phage YUEEL01, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

41. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_019399 (Enterobacteria phage vB_EcoM_ACG-C40, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

42. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM606997 (Enterobacteria phage RB7, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

43. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LN881736 (Escherichia phage slur14, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

44. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN693026 (Marine virus AFVG_117M72, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
actctggatctatatctttaatatcatttata	Protospacer
 .*******.******* ******* *.. **

45. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KU925172 (Escherichia phage PE37, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

46. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MH051915 (Enterobacteria phage vB_EcoM_IME339, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

47. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT682713 (Escherichia phage vB_EcoM_Ozark, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

48. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK327937 (Escherichia phage vB_EcoM_G10400, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

49. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_042129 (Escherichia phage slur03, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

50. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MH809535 (Yersinia phage PYPS2T, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

51. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_042077 (Shigella phage Sf21, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

52. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LN881732 (Escherichia phage slur07, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

53. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN508618 (UNVERIFIED: Escherichia phage ES26, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

54. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT884006 (Escherichia phage vb_EcoM_bov9_1, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

55. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM607002 (Enterobacteria phage RB55, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

56. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KY608967 (UNVERIFIED: Escherichia phage CF2, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

57. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MF001354 (Salmonella phage SG1, partial genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

58. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT176425 (Citrobacter phage PhiZZ23, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

59. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MF327009 (Shigella phage Sf25, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

60. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN580668 (Salmonella phage pSe_SNUABM_01, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

61. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK373781 (Escherichia phage vB_EcoM_KAW1E185, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

62. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_025829 (Shigella phage pSs-1, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

63. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LN881737 (Escherichia phage slur13, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
cgaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

64. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LR597657 (Escherichia phage T4_ev240 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

65. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_030953 (Shigella phage SHFML-11, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

66. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN508614 (UNVERIFIED: Escherichia phage ES12, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

67. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KJ477684 (Enterobacteria phage T4 strain wild, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

68. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MG781190 (Escherichia phage vB_EcoM-fFiEco06, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

69. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LR215723 (Yersinia phage fPS-90 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

70. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MH550421 (Enterobacteria phage T6, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

71. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM606996 (Enterobacteria phage RB6, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

72. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to AP018932 (Escherichia phage KIT03 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

73. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_025448 (Enterobacteria phage RB27, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

74. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to HM137666 (Enterobacteria phage T4T, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

75. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KP869105 (Escherichia coli O157 typing phage 7, partial genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

76. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MF158046 (Shigella phage Sf23, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

77. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT884007 (Escherichia phage vb_EcoM_bov10K1, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

78. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN022785 (Escherichia virus VEc20, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

79. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_000866 (Enterobacteria phage T4, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

80. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT682714 (Escherichia phage vB_EcoM_Lutter, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

81. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LR746311 (Shigella phage vB_SsoM_113 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

82. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK962750 (Shigella phage CM8, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

83. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MH553563 (Enterobacteria phage RB18, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

84. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN895436 (Escherichia phage teqsoen, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

85. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM606995 (Enterobacteria phage RB5, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

86. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MF001359 (Escherichia phage EC121, partial genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

87. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT682710 (Escherichia phage vB_EcoM_FT, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

88. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MG775043 (Citrobacter phage vB_CroM_CrRp10, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

89. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN781580 (Shigella virus KRT47, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

90. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LN881726 (Escherichia phage slur02, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
cgaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

91. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK373785 (Escherichia phage vB_EcoM_OE5505, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

92. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MH992121 (UNVERIFIED: Escherichia phage MLF4, partial genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

93. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT682712 (Escherichia phage vB_EcoM_F1, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

94. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK373779 (Escherichia phage vB_EcoM_G9062, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

95. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KR269718 (Escherichia phage HY03, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

96. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT179807 (Escherichia phage vB_EcoM_IME537, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

97. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN508616 (UNVERIFIED: Escherichia phage ES19, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

98. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KJ477686 (Enterobacteria phage T4 strain GT7, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

99. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT446387 (UNVERIFIED: Escherichia virus TH09, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

100. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK327946 (Escherichia phage vB_EcoM_G4507, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

101. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK327944 (Escherichia phage vB_EcoM_G2540-3, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

102. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to FJ839692 (Enterobacteria phage RB14, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

103. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KX452694 (UNVERIFIED: Escherichia phage KPN1 genomic sequence) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

104. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MH355584 (Escherichia phage vB_EcoM_JB75, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

105. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LC465543 (Shigella phage SfPhi01 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

106. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM606994 (Enterobacteria phage RB3, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

107. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK977694 (Escherichia phage vB_EcoM-Sa45lw, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

108. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KX130862 (Shigella phage SHFML-26, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

109. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KU867876 (Escherichia phage vB_EcoM-UFV13, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

110. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK327929 (Escherichia phage D5505, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

111. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK327936 (Escherichia phage vB_EcoM_G2540, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

112. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_031030 (Escherichia phage UFV-AREG1, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

113. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN508617 (UNVERIFIED: Escherichia phage ES21, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

114. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to FJ839693 (Enterobacteria phage RB51, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

115. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM607004 (Enterobacteria phage RB68, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

116. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN994497 (Phage NBEco003, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

117. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK962755 (Shigella phage JK38, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

118. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MH243439 (Escherichia phage vB_EcoM_NBG2, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

119. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK327945 (Escherichia phage vB_EcoM_G4500, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

120. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MF001360 (Escherichia phage ECO4, partial genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

121. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KJ477685 (Enterobacteria phage T4 strain 147, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

122. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KT184311 (Enterobacteria phage GiZh, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

123. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK886800 (Escherichia phage EcNP1, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

124. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LR215724 (Yersinia phage fPS-65 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

125. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK327940 (Escherichia phage vB_EcoM_G29, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

126. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LN881733 (Escherichia phage slur08, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

127. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to AP011113 (Enterobacteria phage AR1 DNA, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

128. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK373786 (Escherichia phage vB_EcoM_R5505, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

129. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT176424 (Citrobacter phage PhiZZ6, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

130. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_027404 (Yersinia phage PST, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

131. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_008515 (Bacteriophage RB32, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

132. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK962752 (Shigella phage JK23, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

133. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KT184312 (Enterobacteria phage Kha5h, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

134. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to HE956711 (Yersinia phage phiD1 complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

135. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MG867727 (Escherichia phage vB_EcoM-G28, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

136. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KF925357 (Escherichia phage HY01, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

137. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KR233165 (Escherichia phage PEC04, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

138. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_015457 (Shigella phage Shfl2, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

139. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM607001 (Enterobacteria phage RB33, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

140. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LC348379 (Escherichia phage PP01 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

141. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK327942 (Escherichia phage vB_EcoM_G50, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

142. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK327928 (Escherichia phage vB_EcoM_G2133, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

143. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MT176426 (Serratia phage PhiZZ30, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

144. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KX452698 (UNVERIFIED: Shigella phage KPN5 genomic sequence) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

145. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NC_031085 (Shigella phage SHBML-50-1, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

146. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KT184308 (Enterobacteria phage Aplg8, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

147. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MK373787 (Escherichia phage vB_EcoM_G8, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
cgaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

148. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LR597660 (Escherichia phage T4_ev151 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

149. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MN895434 (Escherichia phage teqhad, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

150. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to MH992510 (Escherichia phage vB_EcoM_DalCa, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

151. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM607003 (Enterobacteria phage RB59, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

152. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to LN881729 (Escherichia phage slur04, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
cgaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

153. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to HM997020 (Escherichia phage wV7, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

154. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to JN202312 (Enterobacteria phage ime09, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

155. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM606999 (Enterobacteria phage RB10, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

156. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to M30001 (Bacteriophage T4 CTPase, small outer capsid protein (soc), mrh.2, mrh.1, rpoH modulating protein (mrh), dda.9, dda.8, dda.7, dda.6, modA.1, modA and dda.2 genes, complete cds) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

157. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KM606998 (Enterobacteria phage RB9, complete genome) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
caaatgcatttatatctttaatatcttcaata	Protospacer
.   ** ********** **********  **

158. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to KC847113 (Bacillus phage PBP180, complete sequence) position: , mismatch: 8, identity: 0.75

tttctggatttatatctataatatcttcctta	CRISPR spacer
catgtggatttatatctatcatatgttgattg	Protospacer
. * *************** **** **  **.

159. spacer 7.4|1613318|32|NZ_CP048627|PILER-CR matches to CP023136 (Klebsiella pneumoniae subsp. pneumoniae strain KpvK54 plasmid) position: , mismatch: 8, identity: 0.75

gaatacaacattaaaaatgagggttttttctg	CRISPR spacer
ggaaagaacattaacaatgaaggtttttttat	Protospacer
*.* * ******** *****.********.

160. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to MT774394 (CrAssphage cr271_1, complete genome) position: , mismatch: 8, identity: 0.765

atatgatttttaactttttctattaaatcttcac	CRISPR spacer
aaataagaattaactttatctattacatcttcaa	Protospacer
* **.*   ******** ******* *******

161. spacer 4.6|958089|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to LC081338 (Vibrio sp. 04Ya108 plasmid pSEA1 DNA, complete genome) position: , mismatch: 9, identity: 0.735

gaagaaagaaccaagctatataaaccactttcac	CRISPR spacer
gaagaaataaccaatctatataaaataccaaccg	Protospacer
******* ****** ********* .**.  *

162. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to AP014335 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C6, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

tttctggatttatatctataatatcttcctta	CRISPR spacer
ggtgtggatttatatctatagtttcttctgat	Protospacer
  * ****************.* *****.

163. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 9, identity: 0.735

atatgatttttaactttttctattaaatcttcac	CRISPR spacer
cctaattttttagctttttctattaaatctttat	Protospacer
 .  . ******.******************.*.

164. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to MH356730 (Staphylococcus phage VB-SauS-SA2, complete genome) position: , mismatch: 9, identity: 0.735

atat-gatttttaactttttctattaaatcttcac	CRISPR spacer
-tgtagatttttaaatttttttattaaattaccct	Protospacer
 *.* ********* *****.********. .* .

165. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to AP019522 (Staphylococcal phage MR003 DNA, complete genome) position: , mismatch: 9, identity: 0.735

atatgatttttaactttttctattaaatcttcac	CRISPR spacer
aattctttttgaactttttctattatatctaaat	Protospacer
*  *  **** ************** ****  *.

166. spacer 2.3|653134|35|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to MN856107 (Bacteriophage sp. isolate 216, complete genome) position: , mismatch: 10, identity: 0.714

ttaggtgttcatgcttctaatcctatgcaccaatt	CRISPR spacer
tgtattgttcatgcttataatcctctgcacattct	Protospacer
*  . *********** ******* *****   .*

167. spacer 4.5|958024|35|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to HG796344 (Uncultured bacterium plasmid pRGI00569) position: , mismatch: 10, identity: 0.714

gatgtggatttattagaaatagttgattttctaaa	CRISPR spacer
tccacgattttattagatatagttgattttttaac	Protospacer
  ...*. ********* ************.***

168. spacer 4.14|958618|36|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to MN692951 (Marine virus AFVG_117M12, complete genome) position: , mismatch: 10, identity: 0.722

tcatttttattataaagatggagaacacaaatggtt	CRISPR spacer
aactttttatgataaagatggagaaaacataagcac	Protospacer
   ******* ************** *** * *  .

169. spacer 5.1|1182107|32|NZ_CP048627|PILER-CR matches to NZ_CP026534 (Bacillus velezensis strain DKU_NT_04 plasmid p1_DKU_NT_04, complete sequence) position: , mismatch: 10, identity: 0.688

tttctggatttatatctataatatcttcctta	CRISPR spacer
ccacaccatttatatctataatactttcctgt	Protospacer
.. *   ****************..*****

170. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 10, identity: 0.706

atatgatttttaactttttctattaaatcttcac	CRISPR spacer
tgaacatttttaactttttcttttaaaactcttt	Protospacer
  *  **************** ***** **.. .

171. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014289 (Bacillus thuringiensis strain Bt185 plasmid pBT1850046, complete sequence) position: , mismatch: 10, identity: 0.706

atatgatttttaactttttctattaaatcttcac	CRISPR spacer
ccgtcggttttaacttgttgtattaaatcttgaa	Protospacer
 ..* . ********* ** *********** *

172. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KC683537 (Bacillus pumilus strain 201005130501 plasmid pBP6000, complete sequence) position: , mismatch: 10, identity: 0.706

atatgatttttaactttttctattaaatcttcac	CRISPR spacer
ctgaattcaatagctttttctattaattcttcac	Protospacer
 *. . *.  **.************* *******

173. spacer 8.15|1684013|35|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 10, identity: 0.714

gaataaaaaccacttgtatttatagcttttaacat	CRISPR spacer
acataaaaaccagttatatttatagctggtttttt	Protospacer
. ********** **.***********  *  . *

174. spacer 4.15|958684|37|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

agagctactaaatatttaaaaaaggtggtaataacta	CRISPR spacer
gaattaactaactattaaaaaaaggtggtaattatat	Protospacer
..* . ***** **** *************** *.

175. spacer 7.4|1613318|32|NZ_CP048627|PILER-CR matches to NZ_CP045343 (Vibrio sp. THAF190c plasmid pTHAF190c_e, complete sequence) position: , mismatch: 11, identity: 0.656

gaatacaacattaaaaatgagggttttttctg	CRISPR spacer
tgtcacaacagtaaaaatgggggttttcgtac	Protospacer
 . .****** ********.*******. .

176. spacer 8.5|1683359|34|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to MH356730 (Staphylococcus phage VB-SauS-SA2, complete genome) position: , mismatch: 11, identity: 0.676

atatgatttttaactttttctattaaatcttcac	CRISPR spacer
cgttgattttcaagtttttctattaaagccattt	Protospacer
   *******.** ************* *. . .

177. spacer 8.6|1683423|36|NZ_CP048627|PILER-CR,CRISPRCasFinder,CRT matches to NC_019734 (Crinalium epipsammum PCC 9333 plasmid pCRI9333.02, complete sequence) position: , mismatch: 12, identity: 0.667

ccgacaccagcaccaatataatattcatttttaaaa	CRISPR spacer
tatgtaccagcaccaatataatattgagtttgtctc	Protospacer
.  ..******************** * ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

41687 : 104583

Helicobacter_phage(18.18%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163604654.1\|41687_42797_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3UZC2	Geobacillus_virus	2.1e-86	45.6
WP_008539180.1\|42905_43475_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_008539179.1\|43526_44423_-	DMT family transporter	NA	NA	NA	NA
WP_008539178.1\|44446_45862_-	GntP family permease	NA	NA	NA	NA
WP_008539177.1\|45927_46815_-	myo-inosose-2 dehydratase	NA	NA	NA	NA
WP_008540262.1\|47258_48110_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_008540263.1\|48155_48467_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_008539176.1\|50012_50933_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_008539175.1\|51052_51886_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_008539174.1\|51930_52941_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_008539172.1\|53148_54177_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_008539171.1\|54298_54901_-	cytidylate kinase-like family protein	NA	NA	NA	NA
WP_008539170.1\|54929_56309_-	MFS transporter	NA	NA	NA	NA
WP_008539168.1\|56447_57473_-	inositol 2-dehydrogenase	NA	NA	NA	NA
WP_008539167.1\|57817_58735_-	NUDIX hydrolase	NA	NA	NA	NA
WP_008539166.1\|58929_59499_+	DUF3793 family protein	NA	NA	NA	NA
WP_008539165.1\|59522_59954_+	flavodoxin	NA	NA	NA	NA
WP_008539164.1\|60101_61229_+	DUF362 domain-containing protein	NA	NA	NA	NA
WP_008539163.1\|61470_62154_+	membrane protein	NA	NA	NA	NA
WP_008539162.1\|62257_62833_+	hydrolase	NA	NA	NA	NA
WP_008539161.1\|62898_64182_-	adenylosuccinate synthase	A0A0B5J049	Pandoravirus	1.1e-60	31.8
WP_008539159.1\|64223_65519_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	8.2e-21	32.2
WP_117464361.1\|65861_66257_+\|transposase	IS200/IS605 family transposase	G9CU69	Helicobacter_phage	2.3e-43	60.9
WP_163604655.1\|66285_67392_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G9CU70	Helicobacter_phage	2.4e-77	49.5
WP_008539154.1\|67489_68827_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	5.5e-113	49.0
WP_008539153.1\|68840_70820_-\|protease	ATP-dependent protease, Lon family	A0A0R6PGP8	Moraxella_phage	2.0e-26	25.5
WP_008539152.1\|70829_71273_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_008539151.1\|71244_73254_-	DHH family phosphoesterase	NA	NA	NA	NA
WP_008539150.1\|73265_74219_-	YybS family protein	NA	NA	NA	NA
WP_008539149.1\|74353_75508_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_039881461.1\|75500_75929_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_008539147.1\|76291_76837_+	NADH peroxidase	NA	NA	NA	NA
WP_008539146.1\|76993_78298_+	M18 family aminopeptidase	NA	NA	NA	NA
WP_008539144.1\|78316_79264_+	D-2-hydroxyacid dehydrogenase	M1I636	Acanthocystis_turfacea_Chlorella_virus	6.2e-10	29.5
WP_008539141.1\|79314_79689_-	desulfoferrodoxin	NA	NA	NA	NA
WP_008539139.1\|79716_81813_-	glycogen debranching protein	NA	NA	NA	NA
WP_008539137.1\|81825_82167_-	STAS domain-containing protein	NA	NA	NA	NA
WP_008539136.1\|82530_84435_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_008539135.1\|84472_85384_-	1-phosphofructokinase	NA	NA	NA	NA
WP_008539134.1\|85384_86128_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_008539133.1\|86316_87177_+	YitT family protein	M1Q1P6	Streptococcus_phage	1.4e-29	27.8
WP_008539132.1\|87493_88600_+	hydrogenase small subunit	NA	NA	NA	NA
WP_008539131.1\|88606_90508_+	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA
WP_008539130.1\|90500_91232_+	Ni/Fe-hydrogenase, b-type cytochrome subunit	NA	NA	NA	NA
WP_008539128.1\|91247_91490_+	cation transporter	NA	NA	NA	NA
WP_008539125.1\|91539_91881_+	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
WP_008539124.1\|91881_92556_+	hydrogenase nickel incorporation protein HypB	NA	NA	NA	NA
WP_008539123.1\|92558_93035_+	HyaD/HybD family hydrogenase maturation endopeptidase	NA	NA	NA	NA
WP_008539122.1\|93010_95320_+	carbamoyltransferase HypF	NA	NA	NA	NA
WP_008539121.1\|95335_95599_+	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA
WP_008539120.1\|95549_96647_+	hydrogenase formation protein HypD	NA	NA	NA	NA
WP_039881468.1\|96709_97699_+	hydrogenase expression/formation protein HypE	NA	NA	NA	NA
WP_008539118.1\|97970_99317_-	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_008539117.1\|99676_101674_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	7.4e-154	47.9
WP_163604656.1\|101754_102267_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_163604657.1\|102221_103115_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	8.6e-78	56.1
WP_008539112.1\|103473_104583_-\|protease	M48 family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

612408 : 619713

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008538650.1\|612408_613203_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	3.9e-21	31.1
WP_008538649.1\|613214_613406_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_008538648.1\|613487_613817_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_008538647.1\|613844_614822_-	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	4.5e-11	24.2
WP_008538646.1\|615069_615876_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_008538644.1\|616183_617311_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	4.8e-49	33.1
WP_008538643.1\|617315_617963_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.5e-34	40.0
WP_008538642.1\|617981_619181_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	6.5e-105	48.9
WP_008538641.1\|619245_619713_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.5e-46	63.3

DBSCAN-SWA_3

813101 : 861139

Geobacillus_virus(20.0%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163604674.1\|813101_814208_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G9CU70	Helicobacter_phage	1.1e-85	49.1
WP_008538414.1\|814319_816017_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_008538413.1\|816272_817055_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.9e-29	37.4
WP_008538412.1\|817057_818731_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_008538411.1\|818727_819744_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_008538410.1\|819907_821002_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_008538409.1\|821058_821826_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_008538408.1\|822024_822198_+	hypothetical protein	NA	NA	NA	NA
WP_008538407.1\|822229_823015_-\|tRNA	tRNA 2-thiocytidine biosynthesis protein TtcA	A0A0U2S5Z2	Escherichia_phage	8.2e-24	30.2
WP_008538405.1\|823253_824897_+	putative manganese-dependent inorganic diphosphatase	NA	NA	NA	NA
WP_008538396.1\|825116_825566_+\|transposase	IS200/IS605 family transposase	A0A0H3UZM0	Geobacillus_virus	6.8e-15	31.1
WP_008538403.1\|825663_827166_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_008538402.1\|827582_828185_+	LUD domain-containing protein	NA	NA	NA	NA
WP_008538401.1\|828216_830388_+	LUD domain-containing protein	NA	NA	NA	NA
WP_008538400.1\|830416_831208_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_008538399.1\|831222_832419_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
WP_008538398.1\|832415_833813_+	FAD-binding protein	NA	NA	NA	NA
WP_008538397.1\|833955_836241_+	DNA helicase PcrA	A7KV33	Bacillus_phage	3.8e-146	42.9
WP_008538396.1\|836440_836890_+\|transposase	IS200/IS605 family transposase	A0A0H3UZM0	Geobacillus_virus	6.8e-15	31.1
WP_050900408.1\|837531_837954_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_039881432.1\|838014_840015_+	NAD-dependent DNA ligase LigA	Q332J4	Clostridium_botulinum_C_phage	4.0e-99	36.5
WP_008538392.1\|840088_840985_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_008538391.1\|841091_842519_-	MFS transporter	NA	NA	NA	NA
WP_008538390.1\|842680_842971_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_008538389.1\|843011_844475_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_008538388.1\|844474_845902_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_008538387.1\|846085_847192_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_008538386.1\|847188_849438_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	4.5e-107	39.3
WP_008538385.1\|849463_850789_+\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_008538384.1\|850830_851373_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_008538383.1\|851387_852782_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A173GFL6	Erwinia_phage	8.2e-43	29.2
WP_008538382.1\|852916_853690_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_008538381.1\|853930_854659_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_008538379.1\|854743_855391_+	translation elongation factor Ts	NA	NA	NA	NA
WP_008538378.1\|855573_856299_+	UMP kinase	NA	NA	NA	NA
WP_008538377.1\|856298_856856_+	ribosome recycling factor	NA	NA	NA	NA
WP_008538376.1\|856860_857061_+	hypothetical protein	NA	NA	NA	NA
WP_008538375.1\|857064_857232_+	4Fe-4S binding protein	NA	NA	NA	NA
WP_008538374.1\|857315_858092_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.6e-27	45.5
WP_008538373.1\|858116_858941_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_008538372.1\|858959_860111_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_008538371.1\|860104_861139_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA

DBSCAN-SWA_4

956928 : 999844

Clostridium_phage(26.92%)

plate,integrase,tail,terminase,tRNA

attL 952073:952088|attR 987583:987598

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
952073:952088	attL	NA	NA	NA	NA
WP_008538275.1\|956928_957669_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_008538273.1\|959256_960363_-\|integrase	site-specific integrase	A0A0A8WIE1	Clostridium_phage	1.2e-25	28.7
WP_008538272.1\|960468_960729_+	DUF4160 domain-containing protein	NA	NA	NA	NA
WP_008538271.1\|960763_961117_+	DUF2442 domain-containing protein	NA	NA	NA	NA
WP_008538270.1\|961121_961364_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_008538269.1\|961408_962506_-	SAP domain-containing protein	NA	NA	NA	NA
WP_163604675.1\|962560_963010_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_008538267.1\|963135_963333_+	transcriptional regulator	NA	NA	NA	NA
WP_008538266.1\|963422_963575_+	hypothetical protein	NA	NA	NA	NA
WP_008538265.1\|963595_964624_+	hypothetical protein	NA	NA	NA	NA
WP_008538264.1\|964626_964923_+	hypothetical protein	NA	NA	NA	NA
WP_008538263.1\|964961_965453_+	hypothetical protein	NA	NA	NA	NA
WP_154645558.1\|965457_965874_+	hypothetical protein	NA	NA	NA	NA
WP_008538260.1\|966011_967985_+	AAA family ATPase	A0A1L2K2K3	Aeribacillus_phage	1.9e-77	30.6
WP_008538259.1\|968000_968804_+	hypothetical protein	S4U0C4	uncultured_phage	1.2e-57	53.3
WP_008538258.1\|968823_969633_+	MBL fold metallo-hydrolase	A0A1L2JY21	Aeribacillus_phage	1.3e-51	45.2
WP_008538257.1\|969637_970099_+	hypothetical protein	NA	NA	NA	NA
WP_008538256.1\|970100_970709_+	hypothetical protein	NA	NA	NA	NA
WP_163604676.1\|970724_971567_+	DnaD domain protein	NA	NA	NA	NA
WP_008538254.1\|971553_972159_+	ATP-binding protein	S4U0J1	uncultured_phage	3.5e-30	38.9
WP_008538253.1\|972163_972472_+	hypothetical protein	NA	NA	NA	NA
WP_008538252.1\|972473_972758_+	hypothetical protein	NA	NA	NA	NA
WP_008538251.1\|972802_973180_+	hypothetical protein	NA	NA	NA	NA
WP_008538250.1\|973189_973648_+	DUF3850 domain-containing protein	J9QD24	Clostridium_phage	1.4e-12	48.8
WP_008538249.1\|973625_974129_+	hypothetical protein	NA	NA	NA	NA
WP_008538247.1\|974121_974619_+	hypothetical protein	S4TZY4	uncultured_phage	5.4e-13	38.8
WP_008538245.1\|974625_974808_+	hypothetical protein	NA	NA	NA	NA
WP_154645557.1\|974794_975226_+	hypothetical protein	NA	NA	NA	NA
WP_008538243.1\|975243_975717_+	hypothetical protein	A0A2H4PBD2	Lactobacillus_phage	1.1e-07	36.4
WP_008538241.1\|975969_976173_+	hypothetical protein	NA	NA	NA	NA
WP_008538239.1\|976384_976879_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_163604677.1\|977138_977894_+	ParB N-terminal domain-containing protein	F8J155	Lactobacillus_virus	5.2e-68	51.8
WP_008538237.1\|977886_978753_+	hypothetical protein	X2CXE2	Lactobacillus_phage	5.2e-72	48.8
WP_008538236.1\|978836_979778_+	radical SAM protein	NA	NA	NA	NA
WP_008538234.1\|979823_980255_+	hypothetical protein	NA	NA	NA	NA
WP_154645566.1\|980283_981654_+\|terminase	terminase B	B6SBS6	Clostridium_virus	1.1e-127	50.8
WP_008538231.1\|983139_984108_+	hypothetical protein	A0A0N7ACI5	Bacillus_phage	1.2e-53	37.3
WP_050900407.1\|984125_985421_+	hypothetical protein	A0A0A8WFF1	Clostridium_phage	1.1e-68	42.0
WP_008538229.1\|985439_986138_+	DUF2190 family protein	A0A0A8WJN5	Clostridium_phage	1.2e-21	45.9
WP_008538228.1\|986151_987186_+	hypothetical protein	A0A0A8WEW9	Clostridium_phage	4.3e-113	57.2
WP_008538227.1\|987198_987561_+	hypothetical protein	NA	NA	NA	NA
WP_008538226.1\|987557_987947_+	hypothetical protein	NA	NA	NA	NA
987583:987598	attR	NA	NA	NA	NA
WP_008538225.1\|987957_988371_+	hypothetical protein	NA	NA	NA	NA
WP_008538223.1\|988374_989241_+	DUF3168 domain-containing protein	A0A0N7ACG6	Bacillus_phage	2.1e-49	39.3
WP_008538222.1\|989240_989465_+	hypothetical protein	NA	NA	NA	NA
WP_008538220.1\|989481_990948_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0N7AEC6	Bacillus_phage	8.6e-75	33.6
WP_008538219.1\|990962_991397_+\|tail	phage tail tube protein	A0A0N7ACS0	Bacillus_phage	1.3e-34	46.9
WP_050900419.1\|991516_991915_+	XkdN	A0A2H4J883	uncultured_Caudovirales_phage	9.6e-21	42.4
WP_008538216.1\|992086_995092_+\|tail	phage tail tape measure protein	A0A059T5F4	Listeria_phage	1.1e-31	45.9
WP_008538215.1\|995096_995873_+	LysM peptidoglycan-binding domain-containing protein	A0A0N7ACL7	Bacillus_phage	1.2e-27	40.3
WP_008538214.1\|995869_996895_+	hypothetical protein	A0A0N6W8H4	Bacillus_phage	5.1e-74	42.8
WP_008538213.1\|996878_997262_+	hypothetical protein	NA	NA	NA	NA
WP_008538211.1\|997264_997717_+	DUF2634 domain-containing protein	A0A0A7RUS1	Clostridium_phage	1.4e-12	30.9
WP_008538210.1\|997716_998403_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.0e-22	32.6
WP_008538209.1\|998418_998841_+\|plate	baseplate J/gp47 family protein	A0A0A7S0L4	Clostridium_phage	3.1e-17	37.2
WP_163604678.1\|998830_999844_+	DUF2313 domain-containing protein	S6BFJ0	Thermus_phage	1.2e-11	31.3

DBSCAN-SWA_5

1156978 : 1181465

Pseudomonas_phage(25.0%)

holin,head,terminase,integrase

attL 1171644:1171660|attR 1181218:1181234

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008538014.1\|1156978_1158424_+	ParB N-terminal domain-containing protein	A0A0E3U266	Fusobacterium_phage	2.1e-81	37.4
WP_008538012.1\|1158465_1158654_+	hypothetical protein	NA	NA	NA	NA
WP_008538010.1\|1158695_1159190_+	hypothetical protein	NA	NA	NA	NA
WP_008538009.1\|1159192_1160542_+\|terminase	phage terminase large subunit	A0A2H4P855	Pseudomonas_phage	4.3e-81	38.0
WP_008538008.1\|1160574_1161870_+	DUF1073 domain-containing protein	A0A2K9V3H1	Faecalibacterium_phage	4.8e-53	33.9
WP_050900405.1\|1161862_1162639_+\|head	phage head morphogenesis protein	A9DEG6	Yersinia_phage	1.1e-23	32.0
WP_008538006.1\|1162654_1163713_+	DUF2213 domain-containing protein	E5AGA6	Erwinia_phage	9.3e-55	38.9
WP_008538005.1\|1163717_1164167_+	DUF2190 family protein	NA	NA	NA	NA
WP_008538004.1\|1164172_1165162_+	DUF2184 domain-containing protein	A0A0N9SG07	Pseudomonas_phage	3.3e-38	33.9
WP_154645550.1\|1165172_1165412_+	hypothetical protein	NA	NA	NA	NA
WP_008538002.1\|1165401_1165797_+	DUF4054 domain-containing protein	NA	NA	NA	NA
WP_008538001.1\|1165793_1166237_+	hypothetical protein	A0A2K9V3I1	Faecalibacterium_phage	3.8e-18	39.6
WP_008538000.1\|1166241_1166583_+	hypothetical protein	NA	NA	NA	NA
WP_008537999.1\|1166575_1167103_+	hypothetical protein	NA	NA	NA	NA
WP_008537998.1\|1167102_1168458_+	DUF3383 family protein	A0A0N9SJA3	Pseudomonas_phage	7.7e-78	39.5
WP_008537997.1\|1168471_1168906_+	DUF3277 family protein	NA	NA	NA	NA
WP_143052061.1\|1168902_1169439_+	hypothetical protein	A0A0N9RR02	Pseudomonas_phage	3.6e-07	25.5
WP_008537993.1\|1169601_1171677_+	tape measure protein	H9EB42	Vibrio_phage	1.1e-27	34.5
1171644:1171660	attL	NA	NA	NA	NA
WP_008537992.1\|1171689_1172400_+	hypothetical protein	E5AGB8	Erwinia_phage	3.6e-10	29.0
WP_008537991.1\|1172413_1172755_+	hypothetical protein	NA	NA	NA	NA
WP_008537989.1\|1172729_1173620_+	hypothetical protein	A0A2K9V3M6	Faecalibacterium_phage	2.7e-31	30.8
WP_008537987.1\|1173616_1174213_+	hypothetical protein	A0A0K1YAB2	Cronobacter_phage	2.3e-10	29.6
WP_008537986.1\|1174227_1174605_+	hypothetical protein	I3PGV7	Xanthomonas_phage	8.2e-14	39.4
WP_008537985.1\|1174588_1176019_+	hypothetical protein	A0A2K9V3N8	Faecalibacterium_phage	4.6e-57	31.1
WP_008537984.1\|1176011_1176698_+	DUF2612 domain-containing protein	W8EDG3	Pseudomonas_phage	1.8e-14	31.5
WP_163604683.1\|1176694_1177843_+	hypothetical protein	A0A2H4J9C3	uncultured_Caudovirales_phage	7.8e-23	36.3
WP_163604684.1\|1177839_1178097_-	hypothetical protein	NA	NA	NA	NA
WP_163604685.1\|1178108_1178339_-	hypothetical protein	NA	NA	NA	NA
WP_008537982.1\|1178583_1179603_-\|integrase	tyrosine-type recombinase/integrase	H7BVE3	unidentified_phage	4.0e-47	34.4
WP_008537981.1\|1179668_1180133_+	hypothetical protein	NA	NA	NA	NA
WP_163604686.1\|1180253_1180703_+\|holin	phage holin family protein	M9Q253	Clostridium_phage	8.6e-18	40.6
WP_008537977.1\|1180916_1181465_+	N-acetylmuramoyl-L-alanine amidase	M4ZRP4	Bacillus_phage	3.1e-14	35.2
1181218:1181234	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1314496 : 1321716

Prochlorococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039881320.1\|1314496_1314841_-	helix-turn-helix transcriptional regulator	Q786F1	Bacillus_phage	4.4e-06	43.3
WP_008537824.1\|1315191_1316463_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_008537823.1\|1316550_1317144_-	IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	1.6e-48	54.5
WP_008537822.1\|1317178_1317793_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.0e-30	41.3
WP_008537821.1\|1317785_1318853_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	9.6e-68	44.0
WP_008537820.1\|1318875_1320309_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.2e-67	35.7
WP_008537819.1\|1320423_1321134_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	2.7e-42	39.3
WP_008537818.1\|1321224_1321716_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.0e-24	45.3

DBSCAN-SWA_7

1373956 : 1389488

Clostridium_phage(33.33%)

holin,integrase,terminase,protease,capsid

attL 1372536:1372551|attR 1380082:1380097

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1372536:1372551	attL	NA	NA	NA	NA
WP_083826925.1\|1373956_1374421_-\|holin	phage holin family protein	M9Q253	Clostridium_phage	1.9e-20	45.6
WP_008537749.1\|1374434_1374731_-	hypothetical protein	NA	NA	NA	NA
WP_008537748.1\|1374723_1374867_-	hypothetical protein	NA	NA	NA	NA
WP_008537746.1\|1375113_1375551_-	hypothetical protein	NA	NA	NA	NA
WP_008537745.1\|1375594_1376617_+\|integrase	tyrosine-type recombinase/integrase	H7BVE3	unidentified_phage	3.5e-43	33.7
WP_154645545.1\|1376807_1377023_-	hypothetical protein	NA	NA	NA	NA
WP_039881314.1\|1377311_1377551_+	hypothetical protein	NA	NA	NA	NA
WP_008537741.1\|1377551_1377827_-	hypothetical protein	NA	NA	NA	NA
WP_008537740.1\|1377988_1378243_+	hypothetical protein	NA	NA	NA	NA
WP_008537739.1\|1378478_1379105_-	hypothetical protein	NA	NA	NA	NA
WP_008537738.1\|1379085_1380255_-	hypothetical protein	NA	NA	NA	NA
1380082:1380097	attR	NA	NA	NA	NA
WP_008537737.1\|1380267_1381791_-	hypothetical protein	NA	NA	NA	NA
WP_008537736.1\|1381790_1382441_-	hypothetical protein	NA	NA	NA	NA
WP_008537735.1\|1382455_1383529_-\|capsid	N4-gp56 family major capsid protein	A0A248SKT9	Klebsiella_phage	9.5e-31	27.4
WP_008537734.1\|1383560_1384742_-	hypothetical protein	NA	NA	NA	NA
WP_008537733.1\|1384747_1385104_-	hypothetical protein	NA	NA	NA	NA
WP_008537732.1\|1385117_1387286_-	hypothetical protein	Q8W6I4	Sinorhizobium_phage	1.1e-33	23.2
WP_008537730.1\|1387292_1387616_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_008537729.1\|1387636_1389049_-\|terminase	PBSX family phage terminase large subunit	A0A0S0KEN9	Bacillus_phage	2.5e-71	54.1
WP_008537728.1\|1389041_1389488_-\|terminase	terminase small subunit	A0A0A8WDX8	Clostridium_phage	5.2e-15	33.8

DBSCAN-SWA_8

1397596 : 1509673

105

Clostridium_phage(33.33%)

plate,holin,integrase,tail,lysis,terminase,transposase,tRNA,portal,capsid

attL 1444989:1445009|attR 1490227:1490247

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008537717.1\|1397596_1398562_-\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	NA	NA	NA	NA
WP_008537716.1\|1398758_1399250_+	HD domain-containing protein	NA	NA	NA	NA
WP_008537715.1\|1399386_1399647_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_008537714.1\|1399647_1399896_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_008537710.1\|1401386_1402493_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G9CU70	Helicobacter_phage	7.1e-82	45.8
WP_008537708.1\|1402955_1403429_+	nucleoside deaminase	NA	NA	NA	NA
WP_008537707.1\|1403507_1404434_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_008537706.1\|1404437_1407998_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_008537704.1\|1408037_1409069_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_008537703.1\|1409252_1409897_-	HAD hydrolase-like protein	NA	NA	NA	NA
WP_008537702.1\|1410047_1411241_-	beta-aspartyl-peptidase	NA	NA	NA	NA
WP_008537701.1\|1411256_1411745_-	membrane protein	NA	NA	NA	NA
WP_008537700.1\|1411759_1412398_-	hypothetical protein	NA	NA	NA	NA
WP_008537699.1\|1412560_1413424_-	hypothetical protein	NA	NA	NA	NA
WP_008537698.1\|1413442_1414201_-	creatininase family protein	NA	NA	NA	NA
WP_008537696.1\|1414233_1415718_-	sodium:solute symporter family protein	NA	NA	NA	NA
WP_008537694.1\|1415723_1415966_-	hypothetical protein	NA	NA	NA	NA
WP_008537693.1\|1416169_1418125_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_008537688.1\|1420869_1423122_-	alpha-galactosidase	NA	NA	NA	NA
WP_008537687.1\|1423396_1425316_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2H4UUX5	Bodo_saltans_virus	1.7e-51	28.4
WP_008537685.1\|1425377_1425764_-	thioesterase family protein	NA	NA	NA	NA
WP_008537684.1\|1426049_1427312_+	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_008537683.1\|1427371_1429336_-	glycoside hydrolase family 127 protein	NA	NA	NA	NA
WP_008537682.1\|1429379_1430726_-	MFS transporter	NA	NA	NA	NA
WP_008537681.1\|1430964_1431855_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_008537680.1\|1431924_1432515_+	viroplasmin family protein	D9J0S8	Brochothrix_phage	2.1e-11	37.3
WP_008537679.1\|1432552_1433584_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.1e-74	43.8
WP_008537678.1\|1434058_1434799_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_008537677.1\|1434810_1435494_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.9e-09	24.9
WP_008537676.1\|1435578_1435956_+	PH domain-containing protein	A6N235	Microbacterium_phage	3.1e-13	37.7
WP_008537675.1\|1436043_1438935_+	DEAD/DEAH box helicase	Q3V5F4	Corynebacterium_phage	8.5e-26	27.6
WP_008537673.1\|1438999_1439503_-	cell division protein SepF	NA	NA	NA	NA
WP_008537672.1\|1439735_1441550_-	translational GTPase TypA	A0A1B0RXH7	Streptococcus_phage	1.3e-19	39.9
WP_008537671.1\|1441688_1442570_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_008537670.1\|1442717_1443404_-	PDZ domain-containing protein	NA	NA	NA	NA
WP_008537669.1\|1443433_1444552_-	aldo/keto reductase	NA	NA	NA	NA
1444989:1445009	attL	NA	NA	NA	NA
WP_008537975.1\|1445225_1445432_-	hypothetical protein	NA	NA	NA	NA
WP_008537976.1\|1445434_1445710_-	hypothetical protein	NA	NA	NA	NA
WP_163604692.1\|1445726_1446272_-	N-acetylmuramoyl-L-alanine amidase	M4ZRP4	Bacillus_phage	1.4e-14	34.8
WP_163604693.1\|1446485_1446935_-\|holin	phage holin family protein	M9Q253	Clostridium_phage	3.8e-18	40.6
WP_008537667.1\|1446975_1448025_+\|integrase	site-specific integrase	A0A0E3Y5J2	Fusobacterium_phage	1.0e-37	32.1
WP_008537666.1\|1448144_1448309_-	hypothetical protein	NA	NA	NA	NA
WP_008537665.1\|1448301_1448712_-	hypothetical protein	NA	NA	NA	NA
WP_039881526.1\|1449367_1449652_+	hypothetical protein	NA	NA	NA	NA
WP_163604694.1\|1449648_1451196_-	hypothetical protein	A0A1V0DY51	Dinoroseobacter_phage	3.4e-05	64.3
WP_008537663.1\|1451209_1451683_-	hypothetical protein	NA	NA	NA	NA
WP_163604695.1\|1451679_1452705_-	DUF2313 domain-containing protein	A0A2H4J717	uncultured_Caudovirales_phage	1.6e-11	32.7
WP_008537661.1\|1452688_1453723_-\|plate	baseplate J/gp47 family protein	A0A0A7RUN3	Clostridium_phage	6.1e-59	40.0
WP_008537660.1\|1453715_1454138_-	DUF2634 domain-containing protein	A0A0A7S0E2	Clostridium_phage	2.0e-24	46.9
WP_008537658.1\|1454130_1454553_-	DUF2577 domain-containing protein	NA	NA	NA	NA
WP_163604726.1\|1454562_1455387_-	hypothetical protein	A0A0K2SUC1	Clostridium_phage	7.5e-28	29.8
WP_154645564.1\|1455524_1456223_-	hypothetical protein	A0A0N7ACF7	Bacillus_phage	5.4e-11	29.9
WP_008537653.1\|1456240_1459543_-\|tail	phage tail tape measure protein	A0A288WG88	Bacillus_phage	1.8e-40	31.9
WP_008537652.1\|1459738_1460095_-	hypothetical protein	NA	NA	NA	NA
WP_008537651.1\|1460121_1460580_-\|tail	phage tail tube protein	A0A0A8WF55	Clostridium_phage	2.8e-32	48.2
WP_008537650.1\|1460593_1461802_-	hypothetical protein	A0A0A8WJR2	Clostridium_phage	4.0e-62	39.8
WP_039881311.1\|1461814_1462255_-	hypothetical protein	NA	NA	NA	NA
WP_008537648.1\|1462251_1462650_-	HK97 gp10 family phage protein	S6B9X8	Thermus_phage	2.5e-05	36.0
WP_039881310.1\|1462646_1463015_-	hypothetical protein	NA	NA	NA	NA
WP_008537647.1\|1462993_1463383_-	hypothetical protein	NA	NA	NA	NA
WP_008537645.1\|1463453_1463714_-	hypothetical protein	NA	NA	NA	NA
WP_008537644.1\|1463725_1465600_-\|capsid	minor capsid protein	A0A1P8BLD7	Lactococcus_phage	5.8e-60	32.6
WP_008537643.1\|1465609_1466578_-	hypothetical protein	A0A0A8WJ45	Clostridium_phage	4.9e-103	60.6
WP_008537642.1\|1466577_1467216_-	phage scaffolding protein	S5M9M5	Brevibacillus_phage	5.8e-28	39.3
WP_008537641.1\|1467228_1467711_-	collagen-like protein	NA	NA	NA	NA
WP_008537640.1\|1467715_1467928_-	hypothetical protein	NA	NA	NA	NA
WP_008537639.1\|1467927_1469334_-\|portal	phage portal protein	A0A0A7S0I9	Clostridium_phage	5.8e-145	54.0
WP_008537637.1\|1469346_1470597_-\|terminase	PBSX family phage terminase large subunit	B6CXD2	Clostridium_phage	2.8e-111	48.3
WP_008537636.1\|1470577_1471258_-	hypothetical protein	A0A0A8WJN3	Clostridium_phage	4.7e-36	43.3
WP_008537635.1\|1471433_1471739_-	hypothetical protein	NA	NA	NA	NA
WP_008537633.1\|1471904_1472120_-	hypothetical protein	NA	NA	NA	NA
WP_008537632.1\|1472265_1473627_-	DEAD/DEAH box helicase	S5MA26	Brevibacillus_phage	9.6e-137	52.1
WP_008537631.1\|1473627_1473918_-	VRR-NUC domain-containing protein	A0A1S7FZ22	Listeria_phage	1.4e-13	46.7
WP_008537630.1\|1474112_1476545_-	hypothetical protein	A0A0A7RTG3	Clostridium_phage	1.1e-239	51.3
WP_008537629.1\|1476560_1478222_-	PcfJ domain-containing protein	NA	NA	NA	NA
WP_008537628.1\|1478232_1478577_-	hypothetical protein	NA	NA	NA	NA
WP_008537626.1\|1478619_1480596_-	DNA polymerase	A0A0A7RTL3	Clostridium_phage	1.6e-188	52.8
WP_008537625.1\|1480617_1481202_-	DUF2815 family protein	A0A0A7RVM4	Clostridium_phage	1.8e-44	52.3
WP_008537624.1\|1481216_1482374_-	DUF2800 domain-containing protein	A0A0A7S066	Clostridium_phage	3.9e-91	46.6
WP_008537623.1\|1482370_1482790_-	hypothetical protein	NA	NA	NA	NA
WP_008537622.1\|1482846_1483008_-	hypothetical protein	NA	NA	NA	NA
WP_008537621.1\|1483012_1483333_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_008537620.1\|1483512_1483893_+	DUF2513 domain-containing protein	Q3HQY9	Burkholderia_phage	1.4e-05	30.1
WP_008537619.1\|1483895_1484102_-	hypothetical protein	NA	NA	NA	NA
WP_008537618.1\|1484114_1484471_-	hypothetical protein	NA	NA	NA	NA
WP_039881372.1\|1484513_1484717_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_008537616.1\|1484856_1485483_+	helix-turn-helix domain-containing protein	A0A139ZPI6	Marinitoga_camini_virus	5.9e-33	39.2
WP_008537615.1\|1485502_1486114_+	helix-turn-helix domain-containing protein	Q4ZD53	Staphylococcus_phage	3.5e-22	33.8
WP_008537614.1\|1486125_1487058_+	hypothetical protein	NA	NA	NA	NA
WP_008537612.1\|1487285_1488092_+	hypothetical protein	NA	NA	NA	NA
WP_008537611.1\|1488093_1488963_+	hypothetical protein	NA	NA	NA	NA
WP_008537610.1\|1489037_1490222_+\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	2.5e-32	28.5
WP_008537609.1\|1490576_1491056_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
1490227:1490247	attR	NA	NA	NA	NA
WP_008537608.1\|1491104_1491554_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_008537607.1\|1491694_1495237_-	hypothetical protein	NA	NA	NA	NA
WP_117464125.1\|1495955_1496447_+	biotin transporter BioY	NA	NA	NA	NA
WP_008537605.1\|1496460_1497894_+	serine hydrolase	NA	NA	NA	NA
WP_008537604.1\|1498589_1500047_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.9e-124	48.4
WP_163604696.1\|1500471_1500867_+\|transposase	IS200/IS605 family transposase	G9CU69	Helicobacter_phage	8.8e-43	60.2
WP_163604698.1\|1500895_1502002_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G9CU70	Helicobacter_phage	2.4e-77	49.5
WP_075555423.1\|1502011_1502266_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_008537602.1\|1502711_1504034_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_008537601.1\|1504037_1506776_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	4.4e-40	23.6
WP_008537600.1\|1506780_1508724_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	5.6e-74	30.8
WP_163604700.1\|1508797_1509673_-\|transposase	IS982 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

2237189 : 2243695

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008539588.1\|2237189_2237783_+	hypothetical protein	A0A1U9WQS3	Geobacillus_phage	6.4e-05	26.6
WP_008539587.1\|2237836_2238682_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	1.0e-32	34.8
WP_008539586.1\|2238729_2239749_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.0e-82	47.6
WP_008539585.1\|2239748_2240312_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.7e-39	46.2
WP_008539584.1\|2240299_2241190_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	1.3e-102	62.3
WP_008539583.1\|2241211_2242657_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_008539582.1\|2242678_2243695_-	glycosyltransferase family 8 protein	A0A2P0VP84	Tetraselmis_virus	2.1e-11	25.7

DBSCAN-SWA_10

2284023 : 2349086

Helicobacter_phage(23.08%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163604716.1\|2284023_2285130_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G9CU70	Helicobacter_phage	1.7e-83	47.8
WP_163604718.1\|2285158_2285554_-\|transposase	IS200/IS605 family transposase	G9CU69	Helicobacter_phage	1.2e-42	60.2
WP_008539521.1\|2285740_2286571_-	pyridoxamine kinase	NA	NA	NA	NA
WP_008539522.1\|2286571_2288224_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_008539523.1\|2288313_2289975_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_008539524.1\|2290347_2290923_-	hypothetical protein	NA	NA	NA	NA
WP_008539525.1\|2291247_2292510_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_008539526.1\|2292511_2293006_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_008539527.1\|2293014_2294082_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
WP_008539528.1\|2294234_2295068_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_008539529.1\|2295292_2295670_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_008539531.1\|2295693_2296689_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_163604719.1\|2296853_2297960_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G9CU70	Helicobacter_phage	3.7e-78	49.8
WP_008539508.1\|2298291_2299185_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.3e-77	55.2
WP_163604721.1\|2299139_2299652_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_008539505.1\|2299731_2300625_-	4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase	NA	NA	NA	NA
WP_008539503.1\|2300712_2301744_-	bifunctional UDP-4-keto-pentose/UDP-xylose synthase	A0A2K9KZK0	Tupanvirus	6.5e-21	28.1
WP_008539501.1\|2301781_2302699_-	formyltransferase	NA	NA	NA	NA
WP_008539499.1\|2302691_2303645_-	glycosyltransferase	U5P087	Shigella_phage	1.3e-34	30.0
WP_008539498.1\|2303655_2304822_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L0G1	Tupanvirus	1.4e-43	33.2
WP_008539497.1\|2304854_2306504_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_008539496.1\|2306756_2307122_+	EamA family transporter	NA	NA	NA	NA
WP_154645571.1\|2307162_2307918_+	hypothetical protein	NA	NA	NA	NA
WP_008539494.1\|2307978_2309664_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_008539493.1\|2309749_2311039_-	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	3.7e-13	28.2
WP_008539492.1\|2311040_2311718_-	response regulator transcription factor	NA	NA	NA	NA
WP_008539491.1\|2312025_2313291_+	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_008539489.1\|2313392_2314955_+	metallophosphoesterase family protein	NA	NA	NA	NA
WP_008539488.1\|2315148_2316708_+	metallophosphoesterase family protein	NA	NA	NA	NA
WP_008539486.1\|2316810_2317944_+	YibE/F family protein	NA	NA	NA	NA
WP_008539483.1\|2318025_2318886_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_008539481.1\|2319010_2319715_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_008539479.1\|2319820_2321107_+	MFS transporter	NA	NA	NA	NA
WP_008539477.1\|2321142_2321859_-	HAD family phosphatase	G3MA51	Bacillus_virus	2.4e-06	46.7
WP_008539476.1\|2322089_2322356_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_008539474.1\|2322474_2324544_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_008539473.1\|2324562_2325045_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_008539472.1\|2325059_2325977_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_008539471.1\|2326068_2326686_+	LysE family transporter	NA	NA	NA	NA
WP_008539470.1\|2326783_2327386_+	DUF1847 domain-containing protein	NA	NA	NA	NA
WP_008539469.1\|2327749_2328964_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_008539468.1\|2329126_2329726_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_008539467.1\|2329913_2330375_+	HPP family protein	NA	NA	NA	NA
WP_008539465.1\|2330395_2330851_+	hypothetical protein	NA	NA	NA	NA
WP_039881467.1\|2330883_2331756_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_039881466.1\|2331745_2333512_+	DNA helicase RecQ	A0A2K9L3P7	Tupanvirus	5.3e-87	40.2
WP_008539462.1\|2333552_2335067_+	phosphoglucomutase	NA	NA	NA	NA
WP_008539461.1\|2335275_2336505_+	ATP-binding protein	NA	NA	NA	NA
WP_008539460.1\|2336564_2337140_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA
WP_008539459.1\|2337146_2338025_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA
WP_008539458.1\|2338142_2339582_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	8.5e-35	26.4
WP_008539457.1\|2339595_2340579_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_008539456.1\|2340676_2341252_-	cytidylate kinase-like family protein	NA	NA	NA	NA
WP_008539455.1\|2341330_2342818_-	fucose isomerase	NA	NA	NA	NA
WP_008539453.1\|2343166_2344693_+	xylulokinase	NA	NA	NA	NA
WP_008539452.1\|2344722_2346141_+	sugar porter family MFS transporter	NA	NA	NA	NA
WP_008539450.1\|2346241_2347258_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_075554812.1\|2347348_2347975_+\|transposase	IS607 family transposase	Q331Z3	Clostridium_botulinum_C_phage	1.4e-58	57.3
WP_163604723.1\|2347952_2349086_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	D2XQ03	Bacillus_virus	3.3e-135	64.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP048628

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 6824

Clostridium_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008540214.1\|365_671_+	hypothetical protein	NA	NA	NA	NA
WP_008540216.1\|1547_2117_+	DUF3990 domain-containing protein	NA	NA	NA	NA
WP_008540217.1\|2121_2562_+	hypothetical protein	NA	NA	NA	NA
WP_008540218.1\|2584_2809_+	hypothetical protein	NA	NA	NA	NA
WP_008540219.1\|3146_3758_-	hypothetical protein	NA	NA	NA	NA
WP_008540220.1\|3772_4387_-	VWA domain-containing protein	NA	NA	NA	NA
WP_008540222.1\|4791_5163_-\|transposase	transposase	NA	NA	NA	NA
WP_008540223.1\|5238_5385_-	hypothetical protein	NA	NA	NA	NA
WP_163604731.1\|5560_5953_+	helix-turn-helix domain-containing protein	A0A0A8WJK5	Clostridium_phage	1.7e-06	29.7
WP_008540226.1\|5980_6190_-	hypothetical protein	NA	NA	NA	NA
WP_039881523.1\|6191_6824_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.1e-13	32.9

DBSCAN-SWA_2

25640 : 31848

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008540184.1\|25640_27449_+	transglycosylase SLT domain-containing protein	I6ZXX9	Escherichia_phage	1.6e-14	41.4
WP_008540185.1\|27435_27966_+	signal peptidase I	NA	NA	NA	NA
WP_008540186.1\|27972_28722_+	hypothetical protein	NA	NA	NA	NA
WP_008540187.1\|28760_29279_-	hypothetical protein	NA	NA	NA	NA
WP_163604733.1\|29296_29587_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_008540190.1\|29751_31848_+	DNA topoisomerase 3	A0A1X9I6W8	Streptococcus_phage	7.8e-37	28.5

DBSCAN-SWA_3

37528 : 42791

Lactobacillus_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008540202.1\|37528_37858_-	single-stranded DNA-binding protein	B8R683	Lactobacillus_phage	1.7e-10	38.5
WP_008540203.1\|37873_38188_-	hypothetical protein	NA	NA	NA	NA
WP_008540204.1\|38253_38784_-	antirestriction protein ArdA	A0A0A8WIV6	Clostridium_phage	2.0e-10	34.4
WP_008540205.1\|39240_39978_+	AAA family ATPase	A0A0K2FLP4	Brevibacillus_phage	5.9e-16	25.6
WP_008540207.1\|39979_40324_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_008540208.1\|40687_41797_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G9CU70	Helicobacter_phage	1.3e-83	46.8
WP_008540210.1\|41948_42791_+	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	1.3e-67	46.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048627

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP048628

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection