CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP022599	Mycolicibacterium pulveris strain JCM 6370	3 crisprs	csa3,cas3,WYL,DEDDh,DinG,cas4	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022599_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022599_1

1760239-1760343

Orphan

Consensus_repeat	Method
CTGTTCGGCAATGGCGGCGCAGGAGGGACGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022599_1

>merge|NZ_AP022599|1|1760239-1760343|CRISPRCasFinder
CTGTTCGGCAATGGCGGCGCAGGAGGGACGGGTGGCCTGGGCGGCCCCGGGCGGCAACGGCGGGGACGCGCAACTGTTCGGCAATGGCGGCGCAGGAGGGGCGGG

>NZ_AP022599|1|1|1760239-1760343|CRISPRCasFinder
CTGTTCGGCAATGGCGGCGCAGGAGGGACGGG	TGGCCTGGGCGGCCCCGGGCGGCAACGGCGGGGACGCGCAA
CTGTTCGGCAATGGCGGCGCAGGAGGGGCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022599.1\|WP_163899435.1\|1761192_1761789_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022599.1\|WP_163899427.1\|1758050_1759256_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_AP022599.1\|WP_163899450.1\|1766897_1767755_+\|DUF4878-domain-containing-protein	unknown	unknown	gnl\|CDD\|372352
NZ_AP022599.1\|WP_163906000.1\|1754687_1755902_-\|formate-dependent-phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|236454
NZ_AP022599.1\|WP_163899446.1\|1765493_1766384_+\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|224151
NZ_AP022599.1\|WP_163899425.1\|1755977_1757996_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_AP022599.1\|WP_163906002.1\|1754244_1754652_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378987
NZ_AP022599.1\|WP_163905998.1\|1751209_1752064_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380141
NZ_AP022599.1\|WP_163899429.1\|1759252_1759444_+\|ferredoxin	unknown	unknown	gnl\|CDD\|224064
NZ_AP022599.1\|WP_163899444.1\|1764471_1765251_+\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100079
NZ_AP022599.1\|WP_163899421.1\|1752597_1753815_-\|O-succinylhomoserine-sulfhydrylase	unknown	unknown	gnl\|CDD\|236103
NZ_AP022599.1\|WP_163899431.1\|1759805_1759952_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022599.1\|WP_163899420.1\|1752181_1752598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022599.1\|WP_163899437.1\|1761785_1762421_-\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_AP022599.1\|WP_163899422.1\|1753811_1754225_-\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238780
NZ_AP022599.1\|WP_163899448.1\|1766388_1766805_-\|DUF3151-family-protein	unknown	unknown	gnl\|CDD\|378646
NZ_AP022599.1\|WP_163899441.1\|1763793_1764372_+\|peptidase-M50	unknown	unknown	unknown
NZ_AP022599.1\|WP_163906004.1\|1768895_1769573_+\|VTT-domain-containing-protein	unknown	unknown	gnl\|CDD\|182775
NZ_AP022599.1\|WP_163899452.1\|1767751_1768765_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176256
NZ_AP022599.1\|WP_163899439.1\|1762417_1763716_-\|adenylosuccinate-synthase	unknown	unknown	gnl\|CDD\|234904

Protein	Function_ID	Function_description	E-value
NZ_AP022599.1\|WP_163899446.1\|1765493_1766384_+\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.63621e-86
NZ_AP022599.1\|WP_163899427.1\|1758050_1759256_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.01419e-92
NZ_AP022599.1\|WP_163899450.1\|1766897_1767755_+\|DUF4878-domain-containing-protein	gnl\|CDD\|372352	pfam12870, DUF4878, Domain of unknown function (DUF4878). This is a family of putative lipoproteins from bacteria. The family is probably related to the NTF2-like transpeptidase family.	0.000995991
NZ_AP022599.1\|WP_163906000.1\|1754687_1755902_-\|formate-dependent-phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|236454	PRK09288, purT, formate-dependent phosphoribosylglycinamide formyltransferase.	0
NZ_AP022599.1\|WP_163899425.1\|1755977_1757996_+\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	7.9366e-64
NZ_AP022599.1\|WP_163906002.1\|1754244_1754652_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378987	pfam12893, Lumazine_bd_2, Putative lumazine-binding. This is a family of uncharacterized proteins. However, the family belongs to the NTF2-like superfamily of various enzymes, and some of the members of the family are putative dehydrogenases.	0.00897457
NZ_AP022599.1\|WP_163905998.1\|1751209_1752064_-\|hypothetical-protein	gnl\|CDD\|380141	pfam18741, MTES_1575, REase_MTES_1575. Vsr REase Fold. Fused to HEPN (SWT1/Abi2 family), along with Transglutaminase and wHTH.	1.7135e-06
NZ_AP022599.1\|WP_163899429.1\|1759252_1759444_+\|ferredoxin	gnl\|CDD\|224064	COG1141, Fer, Ferredoxin [Energy production and conversion].	7.43252e-13
NZ_AP022599.1\|WP_163899444.1\|1764471_1765251_+\|site-2-protease-family-protein	gnl\|CDD\|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	8.14773e-45
NZ_AP022599.1\|WP_163899421.1\|1752597_1753815_-\|O-succinylhomoserine-sulfhydrylase	gnl\|CDD\|236103	PRK07810, PRK07810, O-succinylhomoserine sulfhydrylase; Provisional.	0
NZ_AP022599.1\|WP_163899437.1\|1761785_1762421_-\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	7.26071e-18
NZ_AP022599.1\|WP_163899439.1\|1762417_1763716_-\|adenylosuccinate-synthase	gnl\|CDD\|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
NZ_AP022599.1\|WP_163899422.1\|1753811_1754225_-\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238780	cd01522, RHOD_1, Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.	1.63937e-45
NZ_AP022599.1\|WP_163899448.1\|1766388_1766805_-\|DUF3151-family-protein	gnl\|CDD\|378646	pfam11349, DUF3151, Protein of unknown function (DUF3151). This family of proteins with unknown function appears to be restricted to Actinobacteria.	1.0323e-69
NZ_AP022599.1\|WP_163906004.1\|1768895_1769573_+\|VTT-domain-containing-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	2.46488e-51
NZ_AP022599.1\|WP_163899452.1\|1767751_1768765_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176256	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.33053e-166

>NZ_AP022599.1|WP_163899431.1|1759805_1759952_-|hypothetical-protein
METRAGSAAEPDAVGGAGDGASRPSVATMTGAELPPAFNGVDAASIAG
>NZ_AP022599.1|WP_163899429.1|1759252_1759444_+|ferredoxin
MRVQADRDVCIQAGNCVMVAGAVFDQDDDGIVTVLVDEVPDDQLANVQEAVKLCPSQALRFVE
>NZ_AP022599.1|WP_163899427.1|1758050_1759256_+|cytochrome-P450
MTQAAELPPLHMRRDGLEPTPALREIRERTGIRTVTNSFGMQVYLITRHDDIKAVLSDHERFSNTRPPGFVLPGAPTVSDEELTRARAGNLLALDPPEHQRLRRMLTPEFTIRRMKRLEPRIAEIVDQQLDAMAGTGPPVDLVQTFALPIPSLAICELLGVPYDDRDEFQQRSARQLDLSTPIPERLELQRQGRAYMASLVERARREPGDDILGLLVREHGAELSDDELVGVASLLLLAGHETTSNMLGLGTLALLRHPDQLAAVRDDPDIVAPAVEELMRWLSIVHNAIPRYTTTDVEVAGVKIPAGELVFVSLPSGNRDPDFIDSPEVLDIRRGAIGHLGFGHGVHHCLGAPLARMEMRIAFPALLRRFPTLALAEDYNEVQFRAFHFIYGLKSLKVTW
>NZ_AP022599.1|WP_163899425.1|1755977_1757996_+|MMPL-family-transporter
MSRRVSWTLAVLVIALSGVLMALAGSDESSSRSPVPVPDSAESARVDELRAQFPGGDSAPAIIVVTRADGAALSSADLDAVNQNWPAQVSSDGQAALAAMPMDADLSGFELTDAVTELREDAAEGLPPGLRTEVTGGPAFGADIADSFSGANITLLAVTAAVVALLLIITYRSPVLWLVPLAVIGFADRVAAVLGTAVAQALGMTPDGSTGGITSVLVFGAGTNYALLLISRYREELGRNDNHRVALAVAVRQAGPAILASNATVVLALLTLFFASSPSVRSLGVQAAAGLIVAAVYVLLVLPPLLALFGRRLFWPFIPRVGAKPLTDSGIWHRIAESVARWPGSVAAVSIAGLALLCIGVWNTPVGLSQTEQFRVQAESVAGYERLSEHFPRGLTDPAHVVAPTERAADVEQAIVATPGVVSVTQAGQSATGLTQWSVVIDAEPASDEAFTVVDELRAAVGEGALVGGSDATARDASAAAGHDRLVVVPAILVVVLAVLYVLLRSALAPLVLVAVTVLSALAALGLGGWASVHLFGFPALDNNAPLFAFLFLVALGVDYTIFLVTRAREETPEHGTRDGIVRAVSATGAVITSAGIVLAAVFCVLGVLPLIVLTQVGIIVGLGILLDTFLVRTVIIPALFTLIGPRIWWPALRGASGADTAQRDISAGKCE
>NZ_AP022599.1|WP_163906000.1|1754687_1755902_-|formate-dependent-phosphoribosylglycinamide-formyltransferase
MTEDDTPAQPAAARSTVMLLGAGELSRELTLAFQQLGAEVIAVDRYADAPAHGVADRAVVARMNDADALTALIEKESPRYVVAEAGLIAADALIAVAERGDVEVFPTPRSTRLSLDREGLRRLAADELGLPTAPFWFAGSVEELTAVAQHAGFPLVVKPVAAAPGEGESVLLRAEDVEPAWQRAVVAGRIPHNRVMAETVVDVDFEITLLTVRTTGPTGPAVHFCEPIGHRQVDGGVLECWQPQPMPPAALDVAKSIAARIVNSLGGRGVFGVELLVRGDEVYFDSVRPRLHDSGLVTLRSQRLSEFELHARAILGLPVDTIMVSPAAAEVVYAGAEPTTGSHVDPQVALADALTVAESDVRLFNRPDDGETPRRLGVALATAADPIVARDRAKRVTTALRGLW
>NZ_AP022599.1|WP_163906002.1|1754244_1754652_-|nuclear-transport-factor-2-family-protein
MTPFLAALGVVVLIVIVIALFNLLGDDEPSAEQQVARAAVGQNDALQRLSYADFRTYTCAAEQGTEADVLAEQRNSVDSRGARYVDDVTDIKVDGDRASAKATYHFDKAPDTKTSVTMSFVREDGAWKVCSAGPR
>NZ_AP022599.1|WP_163899422.1|1753811_1754225_-|rhodanese-like-domain-containing-protein
MSYAGDITPEEAWTLLTDVPEAVLVDCRTEAEWRFVGVPDLATLGRDVVFIEWNRTDGTTNEAFVDDLVAKVGAAPNRPVVFLCRSGNRSIAAAKAATAAGIAPSYNILDGFEGDLDQHRHRGGSGWKAVGLPWRQS
>NZ_AP022599.1|WP_163899421.1|1752597_1753815_-|O-succinylhomoserine-sulfhydrylase
MSGQEVPSVRRPAPLPDGVGPGTIGVRGGLLRSHFDETAEAIYLTSGYVYPSAAEAEKAFTGEIDRYVYSRYGNPTISMFEERLRLIEGAPACFATATGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVQTVFVDGEDLSQWEEALSVPTAAVFFETPSNPMQSLVDIAAVCDLAHAAGAKVVLDNVFATPILQQGLPLGVDVVVYSCTKHIDGQGRVLGGAILGDKTYIDEPVQKLMRHTGPAISAFNAWTLLKGLETLKVRVDYQNTSAHRIAEFLENHPAVSWVRYPFLESHPQYDLAKRQMTGGGTVITFELKGGTKERAFEVLDKLRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEETDDLIADIDQALG
>NZ_AP022599.1|WP_163899420.1|1752181_1752598_-|hypothetical-protein
MSKRSEAKKARRRKRRAARNERWVPDAVMASLSDDIETAALLEEFDQRISERGWVFDEDASDEESALWCYPPSQADLDDDEIADMTTIVLTAADDTDIVHVVFVGTADDYQFGFQELFECLDVIEAYRHGDPVPSFSA
>NZ_AP022599.1|WP_163905998.1|1751209_1752064_-|hypothetical-protein
MRPFIGSEAVAAGVVNRYQLATRHDAVFRNVYVPSGYVVAPVDKAVAAWLWSERRATAAGLSAAALHGMQWIDAHLPAEINQPHRHKTKGILLHSDKLADDEVCVVNGIPATTAARTAYDLGRRRGLTTAVIRLDALMQATDLKPPDIQLLADRHRGARGIVQLREAISLSDAGAESPQETRTRLILTRAGLRPQCTQLEVFNEFGVFVGRIDMGWDDWCVGVEYDGIQHWTDPQVRERDIEKQAKFQALGWRIIRVSANMLRNRPDVIIGRTRAALRAAGAPY
>NZ_AP022599.1|WP_163899435.1|1761192_1761789_-|hypothetical-protein
MNTPVRHRLSTPRAAALAGVLFAVLFTTVMVLMRVAVPDGGDVRTRVAATLMPFAGIAFLWFIGVVRDGFGGFEDKFFSTVFIGSGLLFLAMMFAASATSMAAAHSNGTTAEFARELTLAFGNTYGLRMAAVFMITLATIWLKTNLMPRWLVVATYLAAVGILVASDISMWLVLAFPAWVLCVSVLLLTRAGVIDLDR
>NZ_AP022599.1|WP_163899437.1|1761785_1762421_-|PaaI-family-thioesterase
MSDDPHLIDPDYAKHGGFPEYEPAMPGPGFGRFLTAMRRLQDLAVSADPDDDTWEQAAGRAEELVKLLDPFEAPEGVGPANRVPSLPGAGSLLMPPYRDVTLSPEGVELTVQFSRFSVGGNSAVHGGVLPLLFDSVFGMVIHAVGRPISRTAFLHVDYRKVTPINTPLTARGWMRDAEGRKAFVNAELRDPEGNLLAEANGLMIRLLPGQP
>NZ_AP022599.1|WP_163899439.1|1762417_1763716_-|adenylosuccinate-synthase
MPAIVLIGAQWGDEGKGKATDLLGGRVQWVVRYQGGNNAGHTVVLPTGENFALHLIPSGILTPGVTNVIGNGVVVDPGVLLTELKGLEDRGIDTERLLISADAHLLMPYHVAIDKVVERYAGSKKIGTTGRGIGPCYQDKIARIGIRVADVLDPVLLSEKIEAALEFKNQVLVKIYNRKAIEAEEVVEALLQQAEGFKQRIADTRYLLNAALEKGETVLLEGSQGTLLDVDHGTYPFVTSSNPTAGGAAVGSGIGPTRITTVLGILKAYTTRVGSGPFPTELFDDKGEYLSKAGGEFGVTTGRRRRCGWFDAVIARYATRVNGITDYFLTKLDVLSSLETVPVCVGYRVNGKRLTEMPMTQTDIAAAEPIYEEMPGWWEDISLAREFDDLPAKARDYVLRVEELAGAHISCIGVGPGRDQTIVRRDILAARS
>NZ_AP022599.1|WP_163899441.1|1763793_1764372_+|peptidase-M50
MSAADVVVLPCGGRRLPRALRNLPLAESPEVSCRRMIVVGSHADLAGVLTQLLRADRLDVEVAHVRRSWQARRAVRGVATRVPLIRDETGTVIVGAAEWRGNPAGSALRGEAVVDDTVLFDGDVPGVRVEPTPTMPGLRAAVLGRGRLSWVTGRAAQLGTTGAIVCRDGAPGPRPVRRSTFYRHTEGWLRVG
>NZ_AP022599.1|WP_163899444.1|1764471_1765251_+|site-2-protease-family-protein
MTIRPLNQSVRPSPIFLAIVALTTIGGVLAWIAADAPDVLAYVGVFVFVIAGWVVTLCLHEFAHAFTAWRFGDHDVPVRGYLTLNPFKYSNPVLSIGLPILIIAIGGIGLPGGAVWVRTSFMTRRQKTLVSLAGPATNLAFAILLLSLTALMRDAQRSVFWSGVAFLGFLQVTAFVLNMLPIPGLDGYGALEPHLSPDTQRALQPAKQWGFFILLILLLAPGLNQWFWDIVLWFFDFSGVPRQLVGAGSALTRFWSAWF
>NZ_AP022599.1|WP_163899446.1|1765493_1766384_+|cation-diffusion-facilitator-family-transporter
MGVGHDHSSVDARVSRMVIAAVILTAFFALELTTALVIDSIALLADAGHMLTDLVAMFMGLTAVLLARRGSTSPARTYGWHRAEVFTAVANAALLVGVAAFILYEAVERLGHAPDVPGVPMIVVALAGLAANAVVMLLLRSHSEKSLAVKGAYMEVLADTVGSVGVLIAGIVTVTTRWPYADVVVAVFVALWVLPRAFSLARAALRILSESSPAHIDVDELRAALSRVEGVTEVHDLHVWTLVPGKDMVTAHLISARDSASVLDDARAVLSARGLDHSTVQVEPPDDAADCRCDAE
>NZ_AP022599.1|WP_163899448.1|1766388_1766805_-|DUF3151-family-protein
MTRMGDLLGPDPVLLPGDSAAEAELAAAENPAIVAAAHPSASVAWAALAEAALAEDQPVTAYAYARTGYHRGLDQLRRNGWKGFGPVPYSHEPNRGFLRCVAALARAADAIGESDEYQRCLDLLDDCDPDARAALGLS
>NZ_AP022599.1|WP_163899450.1|1766897_1767755_+|DUF4878-domain-containing-protein
MPNPSGPDQPDDEVDVTPADDAHDADDAADAEQGAADDAHHDSEAATEVLPPPDPDHEPATEVISHADALTEQNPADHAGERRFTAPSGFDAGSTQKIDTPQDPATEVFSPPPGAVQQKPVAPQVIPPRDEAPKPPQNRRSWGWVIAIVLVIAALAAIAVLGTVLLTRGSDARVSQEDQVRSTIQNFDIAIQNGDLATLRSITCGATRDSYVNYNDQAWAETHARVAAAKQYPVVASIDEVVINGDHAEANVTTFMAFAPQVRSTRSFDLEFRDDQWKICQAPNS
>NZ_AP022599.1|WP_163899452.1|1767751_1768765_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MPTHKAVLVESAGAPLVLSDVETASPPRDHVRITVAACGVCGTDHGIVNGGFPEMSWPVTPGHEIAGTIAEVGEGIEDFGPGDRVAVGWFGGNCNRCVPCRKGRFMQCQRMQVPSWHYPGGYAESAVVPVAALARIPDELSFAEAAPMGCAGVTTFNGLRRTAAAPGDLVAVVGIGGLGHLGVQWARAMGFETVAIARGPDKADDARTLGAHQYIDSTAQDVAAALQALGGAAAVLATAANSAAIGQAVGGLGPEGELVICGVSADPMPISPADLIMAGRRVIGHPSGTSRDVEETMRFAVQSGVRAWIEERPLTEAADAYAAMEAGRARYRMVLTV
>NZ_AP022599.1|WP_163906004.1|1768895_1769573_+|VTT-domain-containing-protein
MPDFLDPMTLLGYFGAWALVGLLLVIFVESGVLFPVLPGDSLLFVAGMLAAGTAALAAEGGQTINFQLWQLLVFIPIAAILGGQAGYWIGRNIGTAMFKPDARFLKQRYLDEAHEFFVQRGPFAIVIARFVPIVRTLAPLTAGAARMSYPVFALYNIVGAVVWGVGLTLLGYWLGQFEFIQNLLEPIVIAIVVVSVMPMLLEWLKRRRATKRAGGSAQPATEQPS

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Crispr_ID: NZ_AP022599_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022599_2

1765293-1765420

Orphan

Consensus_repeat	Method
CGGCGTGTTGCGTATGAAACCGCACCCTCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022599_2

>merge|NZ_AP022599|2|1765293-1765420|CRISPRCasFinder
CGGCGTGTTGCGTATGAAACCGCACCCTCGGCGAAACGACGCCACCCCGCGGCAAGCCCTCGACCCGCGACTGTGCGTCCTCATACGCCCCGCCCGGCGTGTTGCGTATGAAACCGCACACTCGGCGA

>NZ_AP022599|2|2|1765293-1765420|CRISPRCasFinder
CGGCGTGTTGCGTATGAAACCGCACCCTCGGCGA	AACGACGCCACCCCGCGGCAAGCCCTCGACCCGCGACTGTGCGTCCTCATACGCCCCGCC
CGGCGTGTTGCGTATGAAACCGCACACTCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022599.1\|WP_163899435.1\|1761192_1761789_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022599.1\|WP_163899427.1\|1758050_1759256_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_AP022599.1\|WP_163899450.1\|1766897_1767755_+\|DUF4878-domain-containing-protein	unknown	unknown	gnl\|CDD\|372352
NZ_AP022599.1\|WP_163899446.1\|1765493_1766384_+\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|224151
NZ_AP022599.1\|WP_163899425.1\|1755977_1757996_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_AP022599.1\|WP_163899433.1\|1760194_1761196_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223003
NZ_AP022599.1\|WP_163899456.1\|1770765_1771413_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176865
NZ_AP022599.1\|WP_163899462.1\|1772892_1773678_-\|XdhC-family-protein	unknown	unknown	gnl\|CDD\|224886
NZ_AP022599.1\|WP_163899429.1\|1759252_1759444_+\|ferredoxin	unknown	unknown	gnl\|CDD\|224064
NZ_AP022599.1\|WP_163899444.1\|1764471_1765251_+\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100079
NZ_AP022599.1\|WP_163899437.1\|1761785_1762421_-\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_AP022599.1\|WP_163899439.1\|1762417_1763716_-\|adenylosuccinate-synthase	unknown	unknown	gnl\|CDD\|234904
NZ_AP022599.1\|WP_163899458.1\|1771433_1772321_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_AP022599.1\|WP_163899454.1\|1769569_1770766_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|226082
NZ_AP022599.1\|WP_163899448.1\|1766388_1766805_-\|DUF3151-family-protein	unknown	unknown	gnl\|CDD\|378646
NZ_AP022599.1\|WP_163899460.1\|1772317_1772911_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133025
NZ_AP022599.1\|WP_163899441.1\|1763793_1764372_+\|peptidase-M50	unknown	unknown	unknown
NZ_AP022599.1\|WP_163906004.1\|1768895_1769573_+\|VTT-domain-containing-protein	unknown	unknown	gnl\|CDD\|182775
NZ_AP022599.1\|WP_163899452.1\|1767751_1768765_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176256
NZ_AP022599.1\|WP_163899431.1\|1759805_1759952_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP022599.1\|WP_163899446.1\|1765493_1766384_+\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.63621e-86
NZ_AP022599.1\|WP_163899427.1\|1758050_1759256_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.01419e-92
NZ_AP022599.1\|WP_163899425.1\|1755977_1757996_+\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	7.9366e-64
NZ_AP022599.1\|WP_163899433.1\|1760194_1761196_+\|hypothetical-protein	gnl\|CDD\|223003	PHA03169, PHA03169, hypothetical protein; Provisional.	0.00245105
NZ_AP022599.1\|WP_163899456.1\|1770765_1771413_-\|SRPBCC-family-protein	gnl\|CDD\|176865	cd07823, SRPBCC_5, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	1.87722e-56
NZ_AP022599.1\|WP_163899462.1\|1772892_1773678_-\|XdhC-family-protein	gnl\|CDD\|224886	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones].	2.75822e-41
NZ_AP022599.1\|WP_163899429.1\|1759252_1759444_+\|ferredoxin	gnl\|CDD\|224064	COG1141, Fer, Ferredoxin [Energy production and conversion].	7.43252e-13
NZ_AP022599.1\|WP_163899444.1\|1764471_1765251_+\|site-2-protease-family-protein	gnl\|CDD\|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	8.14773e-45
NZ_AP022599.1\|WP_163899450.1\|1766897_1767755_+\|DUF4878-domain-containing-protein	gnl\|CDD\|372352	pfam12870, DUF4878, Domain of unknown function (DUF4878). This is a family of putative lipoproteins from bacteria. The family is probably related to the NTF2-like transpeptidase family.	0.000995991
NZ_AP022599.1\|WP_163899439.1\|1762417_1763716_-\|adenylosuccinate-synthase	gnl\|CDD\|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
NZ_AP022599.1\|WP_163899437.1\|1761785_1762421_-\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	7.26071e-18
NZ_AP022599.1\|WP_163899454.1\|1769569_1770766_-\|VWA-domain-containing-protein	gnl\|CDD\|226082	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only].	6.58126e-95
NZ_AP022599.1\|WP_163899448.1\|1766388_1766805_-\|DUF3151-family-protein	gnl\|CDD\|378646	pfam11349, DUF3151, Protein of unknown function (DUF3151). This family of proteins with unknown function appears to be restricted to Actinobacteria.	1.0323e-69
NZ_AP022599.1\|WP_163899458.1\|1771433_1772321_-\|AAA-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	5.39194e-47
NZ_AP022599.1\|WP_163906004.1\|1768895_1769573_+\|VTT-domain-containing-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	2.46488e-51
NZ_AP022599.1\|WP_163899452.1\|1767751_1768765_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176256	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.33053e-166
NZ_AP022599.1\|WP_163899460.1\|1772317_1772911_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	4.30687e-53

>NZ_AP022599.1|WP_163899444.1|1764471_1765251_+|site-2-protease-family-protein
MTIRPLNQSVRPSPIFLAIVALTTIGGVLAWIAADAPDVLAYVGVFVFVIAGWVVTLCLHEFAHAFTAWRFGDHDVPVRGYLTLNPFKYSNPVLSIGLPILIIAIGGIGLPGGAVWVRTSFMTRRQKTLVSLAGPATNLAFAILLLSLTALMRDAQRSVFWSGVAFLGFLQVTAFVLNMLPIPGLDGYGALEPHLSPDTQRALQPAKQWGFFILLILLLAPGLNQWFWDIVLWFFDFSGVPRQLVGAGSALTRFWSAWF
>NZ_AP022599.1|WP_163899441.1|1763793_1764372_+|peptidase-M50
MSAADVVVLPCGGRRLPRALRNLPLAESPEVSCRRMIVVGSHADLAGVLTQLLRADRLDVEVAHVRRSWQARRAVRGVATRVPLIRDETGTVIVGAAEWRGNPAGSALRGEAVVDDTVLFDGDVPGVRVEPTPTMPGLRAAVLGRGRLSWVTGRAAQLGTTGAIVCRDGAPGPRPVRRSTFYRHTEGWLRVG
>NZ_AP022599.1|WP_163899439.1|1762417_1763716_-|adenylosuccinate-synthase
MPAIVLIGAQWGDEGKGKATDLLGGRVQWVVRYQGGNNAGHTVVLPTGENFALHLIPSGILTPGVTNVIGNGVVVDPGVLLTELKGLEDRGIDTERLLISADAHLLMPYHVAIDKVVERYAGSKKIGTTGRGIGPCYQDKIARIGIRVADVLDPVLLSEKIEAALEFKNQVLVKIYNRKAIEAEEVVEALLQQAEGFKQRIADTRYLLNAALEKGETVLLEGSQGTLLDVDHGTYPFVTSSNPTAGGAAVGSGIGPTRITTVLGILKAYTTRVGSGPFPTELFDDKGEYLSKAGGEFGVTTGRRRRCGWFDAVIARYATRVNGITDYFLTKLDVLSSLETVPVCVGYRVNGKRLTEMPMTQTDIAAAEPIYEEMPGWWEDISLAREFDDLPAKARDYVLRVEELAGAHISCIGVGPGRDQTIVRRDILAARS
>NZ_AP022599.1|WP_163899437.1|1761785_1762421_-|PaaI-family-thioesterase
MSDDPHLIDPDYAKHGGFPEYEPAMPGPGFGRFLTAMRRLQDLAVSADPDDDTWEQAAGRAEELVKLLDPFEAPEGVGPANRVPSLPGAGSLLMPPYRDVTLSPEGVELTVQFSRFSVGGNSAVHGGVLPLLFDSVFGMVIHAVGRPISRTAFLHVDYRKVTPINTPLTARGWMRDAEGRKAFVNAELRDPEGNLLAEANGLMIRLLPGQP
>NZ_AP022599.1|WP_163899435.1|1761192_1761789_-|hypothetical-protein
MNTPVRHRLSTPRAAALAGVLFAVLFTTVMVLMRVAVPDGGDVRTRVAATLMPFAGIAFLWFIGVVRDGFGGFEDKFFSTVFIGSGLLFLAMMFAASATSMAAAHSNGTTAEFARELTLAFGNTYGLRMAAVFMITLATIWLKTNLMPRWLVVATYLAAVGILVASDISMWLVLAFPAWVLCVSVLLLTRAGVIDLDR
>NZ_AP022599.1|WP_163899433.1|1760194_1761196_+|hypothetical-protein
MARPDKPVETAAAVGCSAMAAQEGRVAWAAPGGNGGDAQLFGNGGAGGAGGAGSPGADGVNPAWDGVSVAGTGADGIDSPANSSAGTNGYDGYDGRAGFAGGDGGDGGVGFNPGFLVGAQGGHGGAGGNGSPGAPGGDGGAGGNATIATESIPQPAVAGRGGDGGAGGTGARGGDGGNGGNGFVDCEGCSAVGGDGGDGGPGGAGAAGGNGTAGAPGGNGGRGGVFGGTGGAGGPGGRGGDGGDGTDGGNGGNGGVAGHGQGGIEVPGQGGAGGTGGAGGAGGAGGPGGKGGTGGPAGVFGQPGANGSPGQTGTPGDSGENGSDGADGESGDV
>NZ_AP022599.1|WP_163899431.1|1759805_1759952_-|hypothetical-protein
METRAGSAAEPDAVGGAGDGASRPSVATMTGAELPPAFNGVDAASIAG
>NZ_AP022599.1|WP_163899429.1|1759252_1759444_+|ferredoxin
MRVQADRDVCIQAGNCVMVAGAVFDQDDDGIVTVLVDEVPDDQLANVQEAVKLCPSQALRFVE
>NZ_AP022599.1|WP_163899427.1|1758050_1759256_+|cytochrome-P450
MTQAAELPPLHMRRDGLEPTPALREIRERTGIRTVTNSFGMQVYLITRHDDIKAVLSDHERFSNTRPPGFVLPGAPTVSDEELTRARAGNLLALDPPEHQRLRRMLTPEFTIRRMKRLEPRIAEIVDQQLDAMAGTGPPVDLVQTFALPIPSLAICELLGVPYDDRDEFQQRSARQLDLSTPIPERLELQRQGRAYMASLVERARREPGDDILGLLVREHGAELSDDELVGVASLLLLAGHETTSNMLGLGTLALLRHPDQLAAVRDDPDIVAPAVEELMRWLSIVHNAIPRYTTTDVEVAGVKIPAGELVFVSLPSGNRDPDFIDSPEVLDIRRGAIGHLGFGHGVHHCLGAPLARMEMRIAFPALLRRFPTLALAEDYNEVQFRAFHFIYGLKSLKVTW
>NZ_AP022599.1|WP_163899425.1|1755977_1757996_+|MMPL-family-transporter
MSRRVSWTLAVLVIALSGVLMALAGSDESSSRSPVPVPDSAESARVDELRAQFPGGDSAPAIIVVTRADGAALSSADLDAVNQNWPAQVSSDGQAALAAMPMDADLSGFELTDAVTELREDAAEGLPPGLRTEVTGGPAFGADIADSFSGANITLLAVTAAVVALLLIITYRSPVLWLVPLAVIGFADRVAAVLGTAVAQALGMTPDGSTGGITSVLVFGAGTNYALLLISRYREELGRNDNHRVALAVAVRQAGPAILASNATVVLALLTLFFASSPSVRSLGVQAAAGLIVAAVYVLLVLPPLLALFGRRLFWPFIPRVGAKPLTDSGIWHRIAESVARWPGSVAAVSIAGLALLCIGVWNTPVGLSQTEQFRVQAESVAGYERLSEHFPRGLTDPAHVVAPTERAADVEQAIVATPGVVSVTQAGQSATGLTQWSVVIDAEPASDEAFTVVDELRAAVGEGALVGGSDATARDASAAAGHDRLVVVPAILVVVLAVLYVLLRSALAPLVLVAVTVLSALAALGLGGWASVHLFGFPALDNNAPLFAFLFLVALGVDYTIFLVTRAREETPEHGTRDGIVRAVSATGAVITSAGIVLAAVFCVLGVLPLIVLTQVGIIVGLGILLDTFLVRTVIIPALFTLIGPRIWWPALRGASGADTAQRDISAGKCE
>NZ_AP022599.1|WP_163899446.1|1765493_1766384_+|cation-diffusion-facilitator-family-transporter
MGVGHDHSSVDARVSRMVIAAVILTAFFALELTTALVIDSIALLADAGHMLTDLVAMFMGLTAVLLARRGSTSPARTYGWHRAEVFTAVANAALLVGVAAFILYEAVERLGHAPDVPGVPMIVVALAGLAANAVVMLLLRSHSEKSLAVKGAYMEVLADTVGSVGVLIAGIVTVTTRWPYADVVVAVFVALWVLPRAFSLARAALRILSESSPAHIDVDELRAALSRVEGVTEVHDLHVWTLVPGKDMVTAHLISARDSASVLDDARAVLSARGLDHSTVQVEPPDDAADCRCDAE
>NZ_AP022599.1|WP_163899448.1|1766388_1766805_-|DUF3151-family-protein
MTRMGDLLGPDPVLLPGDSAAEAELAAAENPAIVAAAHPSASVAWAALAEAALAEDQPVTAYAYARTGYHRGLDQLRRNGWKGFGPVPYSHEPNRGFLRCVAALARAADAIGESDEYQRCLDLLDDCDPDARAALGLS
>NZ_AP022599.1|WP_163899450.1|1766897_1767755_+|DUF4878-domain-containing-protein
MPNPSGPDQPDDEVDVTPADDAHDADDAADAEQGAADDAHHDSEAATEVLPPPDPDHEPATEVISHADALTEQNPADHAGERRFTAPSGFDAGSTQKIDTPQDPATEVFSPPPGAVQQKPVAPQVIPPRDEAPKPPQNRRSWGWVIAIVLVIAALAAIAVLGTVLLTRGSDARVSQEDQVRSTIQNFDIAIQNGDLATLRSITCGATRDSYVNYNDQAWAETHARVAAAKQYPVVASIDEVVINGDHAEANVTTFMAFAPQVRSTRSFDLEFRDDQWKICQAPNS
>NZ_AP022599.1|WP_163899452.1|1767751_1768765_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MPTHKAVLVESAGAPLVLSDVETASPPRDHVRITVAACGVCGTDHGIVNGGFPEMSWPVTPGHEIAGTIAEVGEGIEDFGPGDRVAVGWFGGNCNRCVPCRKGRFMQCQRMQVPSWHYPGGYAESAVVPVAALARIPDELSFAEAAPMGCAGVTTFNGLRRTAAAPGDLVAVVGIGGLGHLGVQWARAMGFETVAIARGPDKADDARTLGAHQYIDSTAQDVAAALQALGGAAAVLATAANSAAIGQAVGGLGPEGELVICGVSADPMPISPADLIMAGRRVIGHPSGTSRDVEETMRFAVQSGVRAWIEERPLTEAADAYAAMEAGRARYRMVLTV
>NZ_AP022599.1|WP_163906004.1|1768895_1769573_+|VTT-domain-containing-protein
MPDFLDPMTLLGYFGAWALVGLLLVIFVESGVLFPVLPGDSLLFVAGMLAAGTAALAAEGGQTINFQLWQLLVFIPIAAILGGQAGYWIGRNIGTAMFKPDARFLKQRYLDEAHEFFVQRGPFAIVIARFVPIVRTLAPLTAGAARMSYPVFALYNIVGAVVWGVGLTLLGYWLGQFEFIQNLLEPIVIAIVVVSVMPMLLEWLKRRRATKRAGGSAQPATEQPS
>NZ_AP022599.1|WP_163899454.1|1769569_1770766_-|VWA-domain-containing-protein
MTTPHLLRGVDIAAFAVALVDRLHGGGIAVSASGPTGFVEVLQRDWPATRTQLYWAARLTLVNRVEDIAPFDAVFEAVFADAVLGVDPPGLKRSLGTTAASEPGVPGRRQGVAQGGLPWSTRPASVTATDPHDSDFGIPDTLPSRIVASADEPFERFDPDELRLLGRWLEQSVVRWPQRRSMRAEPHRHGKRVDLRATMRQSRETGWETMRVARTRARAHPRRVVLVCDVSRSMQPYATVYLHLMRAAALRHKGIRPEVFAFSTSLTRLTAALSHRSAEVALAKANAKVTDRYGGTRVGHCVGELLAAPHGNVLRGAVVIIASDGWDSDPPEILDRALARVRRRAQTLVWLNPRAAHPDFRPLAGSMAAAMPYCDHFLPAHSLTGLKELFAVLADQGA
>NZ_AP022599.1|WP_163899456.1|1770765_1771413_-|SRPBCC-family-protein
MKIANEFTVSVPVEDAWRVLTDLEQVIPLMPGAQMTGRDGDDVLGKVKVKVGPVTSEFSGKVRFVEQDDEKYRAVIDAKGKEARGTGNAAATVVAQLHDAGEHTRVTVDTDLKIVGKLAQFGSSMLQQVSEKLLGQFVDELEQKLAAEKAALPAQEHGEAAPVIDIGAAKQEPEAIDLLELAGGSALKKYAPAVLGAVLLAAVVFMLVRKARRAS
>NZ_AP022599.1|WP_163899458.1|1771433_1772321_-|AAA-family-ATPase
MTRSSALFADVDEVVRRFDAHDYLLDIGTASAIYLAATLGRPLLLEGEPGVGKTTAAKVLAAVLGTPLLRLQCYEGLTAAEALYDWNYQRQLLSIRLAEARGTGIDESDLYTEAYLVDRPILQCVRYRGPGAPVLLIDEIDRADDEFEALLLEFLGEATVTVPELGTFAAQQPPIVVLTSNRSRDLHDALRRRCLYHWIDYPDPVRAADIVRRTVAGASAPLIERASQFVGAARTLDLDKPPGIAETIDWVAALVALGVTELVAADTEHALASLGALAKTPDDRALIKDAFAEYR
>NZ_AP022599.1|WP_163899460.1|1772317_1772911_-|NTP-transferase-domain-containing-protein
MPRSRVTGMVLAAGTSRRLGGTPKQLLKLGDTTVLGATLAVARSCPFDQLIVTLGAAADAVRKSVVLDGIDIVLADDHAAGCSSSLRAALPWVDPRADGVVLMLGDQPRLTRRTVTKLIACGRGAPIAVCRYDGIGHPFWLSRNMFGELSELHGDKGVWRMIESGAHDVRRVRIDGAVPLDVDTWDDYERLLASVAQ
>NZ_AP022599.1|WP_163899462.1|1772892_1773678_-|XdhC-family-protein
MTITERVAQLRRARTPFVHATVVRAQQPASAHAGDEAILLSDGTIEGFVGGHCAQNSVRKAALGALQAGESVLLRVLPDGDVHYPEAPGACVVVNPCLSGGALEIFLAPQVPPPLIRVCGATPIADALAAMCSVLGYDAMRDDMRDDEADFAPATAVVIATHGGPEAQIIRAALDAGVGYVGLVASKVRGQALLDDLGLTDEQRRRVHTPVGLPIGAKTPAEIAVSILAEVIRGIRVDGLAADRAAAPAETRREDACHDHG

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Crispr_ID: NZ_AP022599_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022599_3

1889940-1890001

Orphan

Consensus_repeat	Method
GGAGTTGTCGACCGAGTTGTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022599_3

>merge|NZ_AP022599|3|1889940-1890001|CRISPRCasFinder
GGAGTTGTCGGTGGAGTTGTCGACCGAGTTGTCCTGGCCGGAGTTGTCCACCGAATTGTCGA

>NZ_AP022599|3|3|1889940-1890001|CRISPRCasFinder
GGAGTTGTCGGTGGAGTTGTCGA	CCGAGTTGTCCTGGCC
GGAGTTGTCCACCGAATTGTCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022599.1\|WP_163899592.1\|1885734_1886193_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226406
NZ_AP022599.1\|WP_163899580.1\|1880841_1881759_-\|ectoine-hydroxylase	unknown	unknown	gnl\|CDD\|131461
NZ_AP022599.1\|WP_163899611.1\|1902449_1903268_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|234689
NZ_AP022599.1\|WP_163899601.1\|1891126_1891648_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022599.1\|WP_163899578.1\|1880352_1880826_+\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|376622
NZ_AP022599.1\|WP_163899584.1\|1882158_1883448_-\|diaminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236437
NZ_AP022599.1\|WP_163899586.1\|1883495_1884035_-\|diaminobutyrate-acetyltransferase	unknown	unknown	gnl\|CDD\|131459
NZ_AP022599.1\|WP_163899603.1\|1891885_1893664_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212667
NZ_AP022599.1\|WP_163899582.1\|1881755_1882145_-\|ectoine-synthase	unknown	unknown	gnl\|CDD\|183953
NZ_AP022599.1\|WP_163899615.1\|1904538_1905405_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl\|CDD\|130274
NZ_AP022599.1\|WP_163899607.1\|1896443_1899347_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|223325
NZ_AP022599.1\|WP_163899609.1\|1899387_1900680_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181738
NZ_AP022599.1\|WP_163899597.1\|1887931_1889791_-\|dynamin-family-protein	unknown	unknown	gnl\|CDD\|223771
NZ_AP022599.1\|WP_163899605.1\|1893667_1896217_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_AP022599.1\|WP_163899590.1\|1885280_1885715_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237019
NZ_AP022599.1\|WP_163899595.1\|1886329_1887823_-\|dynamin-family-protein	unknown	unknown	gnl\|CDD\|223771
NZ_AP022599.1\|WP_163906023.1\|1900735_1902355_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|99777
NZ_AP022599.1\|WP_163899617.1\|1905404_1905770_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_AP022599.1\|WP_163899588.1\|1884297_1885242_+\|TIGR03560-family-F420-dependent-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274648
NZ_AP022599.1\|WP_163899613.1\|1903316_1904588_+\|YibE/F-family-protein	unknown	unknown	gnl\|CDD\|377940

Protein	Function_ID	Function_description	E-value
NZ_AP022599.1\|WP_163899592.1\|1885734_1886193_+\|hypothetical-protein	gnl\|CDD\|226406	COG3889, COG3889, Predicted solute binding protein [General function prediction only].	1.44297e-06
NZ_AP022599.1\|WP_163899580.1\|1880841_1881759_-\|ectoine-hydroxylase	gnl\|CDD\|131461	TIGR02408, putative_L-proline_4-hydroxylase, ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.	2.07165e-150
NZ_AP022599.1\|WP_163899611.1\|1902449_1903268_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	1.63971e-33
NZ_AP022599.1\|WP_163899603.1\|1891885_1893664_+\|Hsp70-family-protein	gnl\|CDD\|212667	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family. HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs.	1.62556e-29
NZ_AP022599.1\|WP_163899584.1\|1882158_1883448_-\|diaminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236437	PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate transaminase.	0
NZ_AP022599.1\|WP_163899586.1\|1883495_1884035_-\|diaminobutyrate-acetyltransferase	gnl\|CDD\|131459	TIGR02406, L-24-diaminobutyric_acid_acetyltransferase, diaminobutyrate acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase. [Cellular processes, Adaptations to atypical conditions].	1.19311e-71
NZ_AP022599.1\|WP_163899582.1\|1881755_1882145_-\|ectoine-synthase	gnl\|CDD\|183953	PRK13290, ectC, L-ectoine synthase; Reviewed.	5.45351e-80
NZ_AP022599.1\|WP_163899615.1\|1904538_1905405_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl\|CDD\|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.66701e-179
NZ_AP022599.1\|WP_163899607.1\|1896443_1899347_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	1.63717e-80
NZ_AP022599.1\|WP_163899609.1\|1899387_1900680_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181738	PRK09265, PRK09265, aminotransferase AlaT; Validated.	0
NZ_AP022599.1\|WP_163899597.1\|1887931_1889791_-\|dynamin-family-protein	gnl\|CDD\|223771	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only].	1.05917e-19
NZ_AP022599.1\|WP_163899605.1\|1893667_1896217_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	4.27952e-15
NZ_AP022599.1\|WP_163899578.1\|1880352_1880826_+\|hemerythrin-domain-containing-protein	gnl\|CDD\|376622	pfam01814, Hemerythrin, Hemerythrin HHE cation binding domain. Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor hemerythrin binds Cadmium so as to protect the organism from toxicity. However Hemerythrin is classically described as Oxygen-binding through two attached Fe2+ ions. And the bacterial NorA is a regulator of response to NO, which suggests yet another set-up for its metal ligands. In Staphylococcus aureus the iron-sulfur cluster repair protein ScdA has been noted to be important when the organism switches to living in environments with low oxygen concentrations; perhaps this protein acts as an oxygen store or scavenger.	1.08272e-07
NZ_AP022599.1\|WP_163899590.1\|1885280_1885715_+\|hypothetical-protein	gnl\|CDD\|237019	PRK11907, PRK11907, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.	0.000192102
NZ_AP022599.1\|WP_163899595.1\|1886329_1887823_-\|dynamin-family-protein	gnl\|CDD\|223771	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only].	1.00818e-25
NZ_AP022599.1\|WP_163906023.1\|1900735_1902355_+\|DNA-binding-response-regulator	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	8.39645e-18
NZ_AP022599.1\|WP_163899617.1\|1905404_1905770_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	4.46752e-06
NZ_AP022599.1\|WP_163899588.1\|1884297_1885242_+\|TIGR03560-family-F420-dependent-LLM-class-oxidoreductase	gnl\|CDD\|274648	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by Rv1855c from Mycobacterium tuberculosis. [Unknown function, Enzymes of unknown specificity].	3.32997e-105
NZ_AP022599.1\|WP_163899613.1\|1903316_1904588_+\|YibE/F-family-protein	gnl\|CDD\|377940	pfam07907, YibE_F, YibE/F-like protein. The sequences featured in this family are similar to two proteins expressed by Lactococcus lactis, YibE and YibF. Most of the members of this family are annotated as being putative membrane proteins, and in fact the sequences contain a high proportion of hydrophobic residues.	1.41091e-76

>NZ_AP022599.1|WP_163899597.1|1887931_1889791_-|dynamin-family-protein
MTQSTDPRKPGAAPAGGPAKTTKVIVELIDHTSRIADAHERGDLADRLARAKKRVLDPQIRVVVAGQLKQGKSQLLNSLLNVPVARVGDDESTVLPTVVTYGETATAKLVVARGEGEEPDEIEIPMADITNDLRRAPQAGGREVLRVEVTAASPLLKNGLSFVDTPGVGGHGQPHLSATLGLMPDADALLMCSDTSQEFTEPEMTFMRQAFEICPLATIIATKTDLYPHWRQIVEANMAHLQRVGLDIPIIPSSSLLRSHAIQLNDKELNEESNFPAIVRFLSEQVLAQQNDRIRDLVVNEVRSAAEHLTMAVESELAALNDPETRDRLKDELEQRKQEAQDALQQTALWQQVLNDGISDLTADVDHDLRNRFRAISQHIEQVIDHCDPTHHWAEIGAELEEAVATAVGDNFVWAYQRAEVLAAEVARTFVEAGLEAVKMPQIDPSQMGASLGEIKSLANLEAKPIGKGRKLTMGMQGSYGGVLMFGMMTSFAGLGMFNPLSIGAGLLMGRTAYKENMENRMLRVRNEAKLNTRRFIDDTQFVVSKESRDRLKAIQRQLRDHYRAIANQTTRSLNESLQATIAAAKLEEAERNNRIRELERQLNILRQVLEHATKLTPA
>NZ_AP022599.1|WP_163899595.1|1886329_1887823_-|dynamin-family-protein
MSTSDQVRAILGGTIQAYRADPAYRNRPDVHNELDRIGRRLNQPIRIALAGTLKAGKSTLVNALVGEDIAPTDATEATRIVTWFRHGPTPKVTANHVGGRRSNVPIGRDPTEGGLTFDFASLDPEDIVDLDVEWPAAELIDATIIDTPGTSSLNRDVSERTLQLLVPDDGVPRVDAVVFLLRTLNAPDIALLKQIGELVGGSAGALGVIGVVSRADEIGAGRIDAMLSAKDVATRFTKEMDRTGICQAVVPVSGLLAFTARNLRQSEFVALEKLAAVDAAELTKAMLSVDRFVREDSDLPVDAATRAALLDRFGMFGIRISIAVLRAGVTDSVALADELLERSGLVALREVIDQQFAQRSDLLKAHTALRSLRQFVQNNPIYATPYIIADIDPLLADTHAFEELRLLSQLHSRPTTLNEDEMASLRRIIGGSGTDAASRLGLQPDAPHDGPRAAFAAAQRWRRRADHPLNDPFTTRACRAAVRSAEALVAEYAARGR
>NZ_AP022599.1|WP_163899592.1|1885734_1886193_+|hypothetical-protein
MARYGPPDDPNYPNDDPTAYVDYGDGGPPPPEPTPWYRKPAALVAFGALGAVVIALIVWGLAQLITGGDEPTDSETLTPLTTTSQSVVTTVPPRETVTETVTPTTTEPQPTTTTTTTTPTTTTTTTTVEPTTTISTTTETVTETVTAPPESE
>NZ_AP022599.1|WP_163899590.1|1885280_1885715_+|hypothetical-protein
MTRRDDDGAGQPWYNRTPAVLGASIAGLAVIGLLVFVVSAAAGQFGEPEQAPLHFVEPSYSTPTTPAATTTATTATVTTTSPPQTTDLSAIETTSTSETTSEPGTSSAEPTSEADDEDEEEDETTERTTRRPRTNVTRTLYPLP
>NZ_AP022599.1|WP_163899588.1|1884297_1885242_+|TIGR03560-family-F420-dependent-LLM-class-oxidoreductase
MNSLSSFRVFVEPQQGASYADQLAVALAAEQLGYSAFFRSDHCLAMSGDGLPGPTDSWVTLAGIARETSSIRLGTLVTSATFRYPGPLAVSVAQVDEMSGGRVEFGIGAGWFEAEHTGYAIPFPPVRERFERLTEQLHILTGMWTTPLGNTFDYTGTHYTVTNSPALPKPAQSPHPPIIIGGTGAKRTPALAAEFAAEFNVPFVSLDVATTQINRVRTALADAGRSVDSLTFSAAFVVCAGRDEAEIARRAAAIGREVDELRSNSPLVGTPAEIADKLVGYTDAGIQRVYLQLLDMSDLDHLEFFAREVVPALR
>NZ_AP022599.1|WP_163899586.1|1883495_1884035_-|diaminobutyrate-acetyltransferase
MSALNSAPDPWADSLRAPVAADALAMHQLVAATGVLDLNSSYAYLLMATDFADTSIVADRDGELCGLITGYHPPARPDVLFVWQVAVSDSARGQGLASAMLDALVYRVRRDRFGHPVTVETTVAPSNTASRAFFGAFARRHGVPLAESPHFSSALLSAAGEHEDEPLLRIGPITAALTA
>NZ_AP022599.1|WP_163899584.1|1882158_1883448_-|diaminobutyrate--2-oxoglutarate-transaminase
MSLAIMAPLSEADLPEVYASVESEVRSYCRGWPAVMESAQGSWVTDTSGRRYLDFFAGAGALNYGHNNPALKRPLLEYLASDGIVHSLDVATSAKTEFLQAFERQILRPRGLDYKVQFPGPTGANSVEAALKLARKVTGRESIISFTNAFHGMTLGALSVTGNSMKRAGAGIPLVHATPMPYDNYFDGVTEDFHWFERVLDDSGSGLNRPAAVIVETVQGEGGLNVARIEWLQALEKLCHKRDILLIVDDVQMGCGRTGPFFSFEEAGIVPDIVTLSKSISGYGLPMALTLFRRDLDVWAPGEHNGTFRGHNPAFITATQAIKTYWQSSDFTDATVGKGEFMRARLEEIAAEHDGVSARGRGMAQGLKFEATELASQVCRAAFDRGALMETSGPSDEVVKLLPPLTASRDELETGLDILAEAVTATVSA
>NZ_AP022599.1|WP_163899582.1|1881755_1882145_-|ectoine-synthase
MIVRTTAEITGTERDVADGAWRSKRIILAGDGVGFSFHETTIRPNSVSEFHYQHHVEAVWVVEGRGSVTNLETGETWPLGPGTMYLLDGHERHRVTCDEQLRMLCVFNPPVTGTEVHDETGAYPPPQIA
>NZ_AP022599.1|WP_163899580.1|1880841_1881759_-|ectoine-hydroxylase
MSAVTMPRVHDPYPTRLGHAIAPIPRAEPTVWGGPHDGPLSQAELDGYEQAGYLIRPGTLGEDWLPPLRHELERMGAELDRDDPRVIYEPGGSIRSVFEPHLISDLVAEVVGLETVIPVARQLLGSDVYIHQARINLMPGFTGTGFYWHSDFETWHAEDGMPAMRAVSCSIALTDNYPYNGPLMVLPGSHRVFYPCVGATPDNHHTSSLVRQETGVPDHDTLTKAAGEYGIEQLTGPAGTAIWFDSNLLHGSGSNITPLPRSNVFLVFNSIENALTEPFAAPRPRPEYLAARTAEPFGVNPPPVS
>NZ_AP022599.1|WP_163899578.1|1880352_1880826_+|hemerythrin-domain-containing-protein
MCQYCGCRDMPLIRDYISEHAHVLNLGGEAVRAIDRGDLPTARDRLNAMAEELQSHFKGEENGLFAVMAADELFAEHIEPLVREHRELEHLLATVDIADADGQQAIRDAVENLFEHTRKEEDGLFPAALTSLDGDQWDAAIQAWHDAHPGREMVRWA
>NZ_AP022599.1|WP_163899601.1|1891126_1891648_-|hypothetical-protein
MANSLLDFVMSVVRDPDTAARFAADPDQAIADANLTNVTSADVEALIPVVAESMSSLVTDVPTTAALDGLGEAATNVWASGAATAAFDAFGDEVPAPVIDDTHALIADQAHVIEEPGEVLRSGLDMLDETSDITDAPIIDEIDDIPIAETHVGSDGDDAVDDVGPPASGFDIF
>NZ_AP022599.1|WP_163899603.1|1891885_1893664_+|Hsp70-family-protein
MSDSLGLSIGMTNLVAARIGRPPVMRRSVLTLFNNRPAEVGLPGEYAHDPTQPGLVLSGFVERVGDPVPLVAADGSAHRGEYVLVEALDAMARTVGGGSPIAIAVPAHWGPGTVGALRGALRSKPSLMPDGQPPALIPDSVAALASLQAAPGLPAEGIIVLVDLGGSGTSITLADAGSNFGAVGETVRYAEFSGDQIDQALLNHVTASIAESANADPTGTLGLNALARLRDETRRAKERLSSETATVVPVEVPGFNSDVRVTRSELEQLMSAPLAGLLDTIEEALQHNNIAPAHISAVATVGGGANIPLVTAQLSERLRAPVITTPQSQLNVAAGAALVADRGIAADAPTGLAPAADAPTSMAAAAWAAGAAGMAATESASDGAASATFRALAWSQDDSPGGDPVPYAGEDYTFDQGATGARPPMAFAHEEEGFEPEPEPLPWYKRPPLLFGAAAAAALLAVGGLAVTLTNTSSDTSPVTETATTVETGPSPEGPPTTVAPQTITVTGTDGQPTTSVIPPPATTTTTTPTTTSPTTTTTTTTTTTTTTTTTTTTTAPTTTPTTITTTSPPAPEPEPEPEPEPEPEPEPDPGA
>NZ_AP022599.1|WP_163899605.1|1893667_1896217_+|helix-turn-helix-transcriptional-regulator
MARPAPERLTDIPPGARQVVAALIAAPTTPVKLLVSGGIGTGKSSVLAGIRSALRDAELPVLTRPPRDGDDPRAAAVIDDAHLLGDDELGRLTDRVADPDATVIVATEPLAHRPALRALTTALERENPTVSLSALSPTDATQVATELLSATPTSEFMRALMATTAGLPFLLHPAIAAAASPDSEIPATAMADAARFTLIERLRQVDEPVLNTLLVSSLSRDLGPDDVAATLRLNADDAQHAVDRARATGLIDPSRSHAFLRTLHRCIAQVLGAVRHHEIEVSLLTSQLESKTLSGDLALQLAEHGLRDDRLSAALTELASRHRTQPARAARLYRAAAAAGATRPTSQLADALALTGDCTTAARLADELLGSEDATERAAAVRIAASIAVHDGSAAQAADLFRWLGPYPDAFVSAAAAITLFAAGDLPSARAALDVESAGPPTSTARAARSLAEGMLTSVEAPYSTTVARLGQALAAEHFPAGVTPDTPAALLTLTALHGGDPVRARSVIARAVRAGLEAGTENVAVAARRHRLLLGWARLQDGHLSAASADVAAVLTDPPLHRRDALWAAALQTAIARRSADSGAMQKHWYAALEVLAEYSVDLFSLLPVGELWVAAARLGQVDRIRHTLDEAFGLLDALGNPVLWSVPLHWAGVHAGILANSPDAVAPHGHALTAASRADGPGSTFAKALATAGRTWLRVLANSVDVEEVTTAARLLSQSGLTWDATRLAGQAALQTPDGRVSGAMLQLARDLKQTATLDDAPGPELGAAREARGTGPTRPAAMRLSDREREVAELLLLGMPYRDIGAQLFISAKTVEHHVARIRRRLGAESRSEMLSMLRAMLTPQG
>NZ_AP022599.1|WP_163899607.1|1896443_1899347_+|4Fe-4S-dicluster-domain-containing-protein
METQMLIRLVVGLGMTAIVLVFAAKRVLWLTNLIRAGARTSPENNRKDNLGTRIFTQIKEVFGQTRLLRWSIPGLAHFFTMWGFFILASVYLEAYGYLFDHDFHIPLIGRWDLLGFLQDFFAVAVLLGIITFAIIRLRTEPKEHGRDSRFYGSHTGGAWLILFMIFNVIWTYALVRGAAVNTGALPYGDGAFFSQLMGWVLNPLGLEANEWIETIGLLLHIGVMLVFLLIVLHSKHLHIGLAPINVTFKRLPDGLGPLLPVEYEGKRIDFEDPPEDAVLGRGKIEDFTWKAYLDMATCTECGRCQSQCPAWNTGKPLSPKLLIMDLRDHLFAKAPYVLGQKESPLENTPEGGLGEELRGEKHAEQHHVPESGFGRITGSGPAQATRPLVGTAEQGGVIDPDVLWSCTTCGACVEQCPVDIEHIDHIVDMRRYQVMMESDFPGELGVLFKNLETKGNPWGQNAKDRTNWIDEVDFDVPVYGKDVESFDGYEYLFWVGCAGAFEDRAKKTTKAVAELLATAGVKYLVLGEGETCNGDSARRSGNEFLFQQLAAQNVETLDELFEGVERLDRKIVTSCPHCFNTLGREYPQVGGNYTVLHHTQLLNRLVRDKKLVPVKPVDGGREITYHDPCYLGRHNKVYEAPRELVGASGAKLTEMPRHADRGLCCGAGGARMWMEEHIGKRVNHERVEEAMDTGASAIATGCPFCRVMITDGVDDVAAAREVEKTEVLDVAQLLLDSLDRSNIKLPEKGTAAKEAEERAAKAAAAAPAVEKAAPKQEPQPEAAPAQAQAAPAAEKPAAPAPAKGLGIAAGAKRPGAKKPPAKPAAADAPAKAEPEVKGLGIAAGARRPGAKKAAPKASPNEGAASVTQPPNADPDQATPETKIDTADSDRGVEQAPVKGLGIAPGARRPGAKKSAAPAKPAEPQSKPEPASESSAAPEASADDGGDKPAPPVKGLGIAKGARPPGKR
>NZ_AP022599.1|WP_163899609.1|1899387_1900680_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MDSSENIGNVTTHHLPFHATGHPPRQRTFTQSSKLQDVLYEIRGPVHEHASRLEAEGHRILKLNIGNPAPFGFEAPDVIMRDIIQALPYAQGYSDSKGILPARRAVFTRYELVEGFPRFDVDDVYLGNGVSELITMTLQALLDNGDQVLIPAPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKITERTKALVVINPNNPTGAVYSREVLTEIAELARKHQLLLLADEIYDKILYDGAEHIAMASVAPDLLTLTFNGLSKAYRVAGYRAGWLVITGPKEHAASFIEGISLLANMRLCPNVPAQHAIQVALGGYQSIDDLVLPGGRLLEQRDVAWEKLNEIPGVSCVKPQGALYAFPRLDPEVYDIVDDEQLVLDLLLQEKILVTQGTGFNWPTPDHLRIVTLPWARDLAAAIERLGNFLAGYRQ
>NZ_AP022599.1|WP_163906023.1|1900735_1902355_+|DNA-binding-response-regulator
MAATDRAAIAFERHAWTDVYRCLTDTTESLTADDLERLAVAAYLIGEDLQSVHAWEQAYAARLAVDEAARAAECGFWLALTQLLHGNTARAGGWLARVGRLLDEANLDCAARGYLLVPPALGAWASGDSAKAAELCGEAGRVAARFGDRDLAAIALLGQGQAAVTAGETARGAALLDEAMVSVTAGEVSPIPAGIVYCAVIETCMGAYDLRRATEWTMALSAWCESQPDLVPYRGQCLVHRSQILQIHGEWSQAGKAARQACEHLAHPTPHPSLGMAAYQRAELHRLHGEFDAADAAYRQAHQHGREPLPGLAQLRLAEGHIDAAVAAVRRALDTNPDRFARPATLAAHVDIMISVGDVAAARTSADELSGLATTVDAPYLHAVAAHADGSTLLAEGDATAALKTLRRAAAGWRELSMPYEAARTRVQTGLACQALGDSDSAAMEFDSARDAFGQLGAQPDMDRLADLVAPKRRSAGGLTERECEVLRLVAAGKTNREIGASLTLSEHTIARHLQNIFAKLGLSSRAAATAYAYEQHLV
>NZ_AP022599.1|WP_163899611.1|1902449_1903268_+|methyltransferase-domain-containing-protein
MSQHVDYRNLRRIEAENYARDFVPVIPAPLAADLIAAADPVPGEFVVDVACGTGVVARLAAQRVGATGKVVGIDLVPEMLSVAEQATASTDTPMEWREARAEALPLPDESYDLVLCQLGLMFFPDRSAAVREMRRVLSPGGRVAINVPGTMPRLFEVMADGLARHINPDLPGFLRGVFSLGHSELRRLLQEAGFHHVAVDTTTKTLRLPPPNQFLWQYLQVTPVAERVMAADAERRQALEKDAIAGWQEFLDGDSLVVELPVITATAKTIPV
>NZ_AP022599.1|WP_163899613.1|1903316_1904588_+|YibE/F-family-protein
MGHSHGHSHSMSGPAPLGPLAAKVVVGLLILIGIAVLAGTVWLWPSQQKTDIPLPFQNAAGGAVTTEAGHVISSSAAACGSASAGRVLTAAPVPARGDGGTCVQALIAIDSGPNTGAHTLLEFSGGPGQPDLAVGDQVRISRQIDEAGTTTYSFYDYERTWPLVALAAVFAVVVVAVARWRGLRALIGIVVAFGVLVVFLLPALRDGAAAVPVALVASAAILYAVIYLAHGVSLRTSAALLGTLTSLLLAAVLSWTAIELAHLTGLSEDQNNTVAAYLGDVSITGLLLAGFIIGSLGVLNDVTVTQASTVFELAELQGSSRRAVFVGAMRVGRDHIASTVYTLVLAYAGSALPLLLLFSVANRSLGDVLTSESVAIEIARSAVGGVALALSVPLTTAIAAVLATPRAASGPPAAAADMRRSPI
>NZ_AP022599.1|WP_163899615.1|1904538_1905405_-|glucose-1-phosphate-thymidylyltransferase-RfbA
MRGIILAGGSGTRLYPITMGTSKQLVPVYDKPMIYYPLSTLMMAGIRDIQLITTPEDAPAFHRLLGDGSQFGINITYAVQQRPEGLAQAFIIGADHIGTGPVALVLGDNIFYGPALGTGLSRFQNVSGGVIFAYWVANPSAYGVVEFSDDGRALSLEEKPATPKSHYAVPGLYFYDNDVIEIARSLQPSARGEYEITDINRTYLNQGRLTVEVLARGTAWLDTGTFDSLLDAGDFVRTIERRQGLKISVPEEVAWRLGFIDDEQLAEQGYAQLKSGYGAYLLQLLEDR
>NZ_AP022599.1|WP_163899617.1|1905404_1905770_-|nuclear-transport-factor-2-family-protein
MSTSEIATVLAWYDALNERDLDTLVALSSDDIELGDTDGASQGHTALRRWAQQQPAIKVETGRMYVHDGVVVAEELPADPGAVVTASAFRVVHDHVTAVFHHGDLASALAATELTEKDLKS

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

11220 : 60649

Mycobacterium_phage(83.67%)

integrase,capsid

attL 3934:3955|attR 63699:63720

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3934:3955	attL	NA	NA	NA	NA
WP_163905644.1\|11220_11430_+	hypothetical protein	A0A076G7H3	Mycobacterium_phage	3.1e-15	56.2
WP_163896458.1\|11431_11629_+	hypothetical protein	NA	NA	NA	NA
WP_163896483.1\|11741_12317_-	hypothetical protein	NA	NA	NA	NA
WP_163896484.1\|12559_14386_+\|capsid	major capsid protein	G8I4L7	Mycobacterium_phage	1.8e-186	66.8
WP_163896485.1\|14484_15315_+	hypothetical protein	G8I4L8	Mycobacterium_phage	1.2e-65	53.5
WP_163896486.1\|15329_15749_+	hypothetical protein	G8I4L9	Mycobacterium_phage	2.9e-12	38.8
WP_163905646.1\|15754_16003_+	hypothetical protein	NA	NA	NA	NA
WP_163896487.1\|16102_16957_+	hypothetical protein	G8I4M4	Mycobacterium_phage	3.8e-99	67.4
WP_163896488.1\|16966_17581_+	hypothetical protein	M4W9S2	Mycobacterium_phage	5.9e-78	72.9
WP_163896489.1\|17619_18369_+	hypothetical protein	G8I4M6	Mycobacterium_phage	7.0e-89	63.3
WP_163905648.1\|18428_18905_+	hypothetical protein	G8I4M7	Mycobacterium_phage	6.5e-40	54.0
WP_163896490.1\|18927_19386_+	hypothetical protein	A0A2R4AND9	Mycobacterium_phage	1.1e-07	36.6
WP_163896491.1\|19372_19786_+	hypothetical protein	G8I4M9	Mycobacterium_phage	7.6e-37	66.2
WP_163896492.1\|19816_20455_+	hypothetical protein	G8I4N0	Mycobacterium_phage	7.6e-12	38.9
WP_163896493.1\|20485_26014_+	hypothetical protein	G8I4N1	Mycobacterium_phage	1.8e-234	39.5
WP_163905649.1\|26589_27594_+	hypothetical protein	G8I4N2	Mycobacterium_phage	1.8e-140	68.0
WP_163896494.1\|27593_28634_+	hypothetical protein	G8I4N3	Mycobacterium_phage	4.6e-115	59.0
WP_163896495.1\|28630_29458_+	hypothetical protein	S5VMX8	Mycobacterium_phage	7.6e-20	37.7
WP_163896496.1\|29491_30136_+	hypothetical protein	G8I4N9	Mycobacterium_phage	5.4e-90	67.3
WP_163896497.1\|30132_30276_+	hypothetical protein	NA	NA	NA	NA
WP_163896498.1\|30272_30878_+	hypothetical protein	G8I4P0	Mycobacterium_phage	4.8e-80	71.2
WP_163905650.1\|30928_32176_+	hypothetical protein	G8I4P1	Mycobacterium_phage	2.0e-133	58.6
WP_163905652.1\|32622_32910_+	hypothetical protein	A0A2P1CCS5	Mycobacterium_phage	5.7e-07	48.2
WP_163896499.1\|32928_33354_+	hypothetical protein	Q19YW2	Mycobacterium_phage	7.9e-05	64.1
WP_163896459.1\|33363_34074_+	hypothetical protein	A0A1I9SC75	Mycobacterium_phage	1.2e-18	47.7
WP_163896500.1\|34107_35910_+	glycerophosphodiester phosphodiesterase family protein	A0A0S2MYI4	Enterococcus_phage	1.8e-10	32.0
WP_163896501.1\|35928_36558_+	hypothetical protein	NA	NA	NA	NA
WP_163896502.1\|36554_37307_-	FkbM family methyltransferase	NA	NA	NA	NA
WP_163896503.1\|37700_38291_+	hypothetical protein	A0A2H4PF11	Gordonia_phage	5.1e-10	32.1
WP_163896504.1\|38318_39725_+	C39 family peptidase	A0A088F7M0	Mycobacterium_phage	2.9e-160	67.7
WP_163896505.1\|39721_40162_+	hypothetical protein	W0LP50	Mycobacterium_phage	1.1e-12	59.7
WP_163896506.1\|40163_40463_-	hypothetical protein	G8I4Q1	Mycobacterium_phage	1.6e-07	36.6
WP_163905654.1\|40524_41355_-\|integrase	tyrosine-type recombinase/integrase	A0A142KA26	Gordonia_phage	2.4e-90	57.9
WP_163896507.1\|41588_42224_-	hypothetical protein	A0A0F6WE01	Mycobacterium_phage	7.1e-34	63.7
WP_163896508.1\|42220_42406_-	helix-turn-helix domain-containing protein	G8I6R8	Mycobacterium_virus	7.3e-16	73.6
WP_163896509.1\|43212_43551_+	hypothetical protein	G1D4H2	Mycobacterium_virus	3.4e-35	74.3
WP_163896510.1\|43654_43942_+	hypothetical protein	NA	NA	NA	NA
WP_163896511.1\|43938_44373_+	hypothetical protein	NA	NA	NA	NA
WP_163905656.1\|44459_44819_+	hypothetical protein	A0A2R4AND3	Mycobacterium_phage	2.7e-46	76.6
WP_163896512.1\|44815_45118_+	hypothetical protein	M4W6X3	Mycobacterium_phage	1.2e-07	39.5
WP_163896513.1\|45448_45823_+	hypothetical protein	A0A097EWI7	Mycobacterium_phage	7.1e-26	55.0
WP_163896514.1\|45819_46104_+	hypothetical protein	NA	NA	NA	NA
WP_163896515.1\|46100_46238_+	hypothetical protein	NA	NA	NA	NA
WP_163896516.1\|46234_46471_+	hypothetical protein	NA	NA	NA	NA
WP_163896517.1\|46463_47405_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A2H4PCZ9	Mycobacterium_phage	4.3e-80	51.6
WP_163896518.1\|47404_48457_+	recombinase RecT	A0A0A7RVR2	Mycobacterium_phage	2.2e-112	65.6
WP_163896519.1\|48634_49546_+	DNA translocase FtsK	A0A1D8EV30	Mycobacterium_phage	5.1e-78	56.1
WP_163896460.1\|49475_49838_+	hypothetical protein	A0A1D8EX57	Mycobacterium_phage	1.2e-14	41.4
WP_163896520.1\|49837_50353_+	RusA family crossover junction endodeoxyribonuclease	G8I6T4	Mycobacterium_virus	5.5e-53	63.5
WP_163896521.1\|50343_50616_+	hypothetical protein	A0A0F6WEQ5	Mycobacterium_phage	1.8e-15	59.3
WP_163896522.1\|50615_50858_+	hypothetical protein	A0A0F6SJL2	Mycobacterium_phage	4.4e-21	63.6
WP_163896523.1\|50878_51427_+	hypothetical protein	A0A1J0MDV9	Mycobacterium_phage	1.6e-21	34.1
WP_163896524.1\|51784_52081_+	hypothetical protein	A0A0F6WEP7	Mycobacterium_phage	1.3e-25	61.5
WP_163896525.1\|52073_52439_+	hypothetical protein	NA	NA	NA	NA
WP_163896526.1\|52435_52630_+	hypothetical protein	NA	NA	NA	NA
WP_163896461.1\|52622_53072_+	hypothetical protein	NA	NA	NA	NA
WP_163896527.1\|53172_53439_+	hypothetical protein	NA	NA	NA	NA
WP_163896528.1\|53435_53627_+	hypothetical protein	NA	NA	NA	NA
WP_163896529.1\|53623_54076_+	hypothetical protein	NA	NA	NA	NA
WP_163896530.1\|54072_55005_+	DUF5131 family protein	A0A142F2K7	Mycobacterium_phage	4.9e-116	65.7
WP_163905658.1\|55130_55355_+	hypothetical protein	NA	NA	NA	NA
WP_163896462.1\|55376_55553_+	hypothetical protein	A0A0F6WE09	Mycobacterium_phage	5.3e-08	60.3
WP_163896531.1\|55567_55858_+	hypothetical protein	NA	NA	NA	NA
WP_163896532.1\|55850_56120_+	hypothetical protein	NA	NA	NA	NA
WP_163896533.1\|56112_56349_+	hypothetical protein	NA	NA	NA	NA
WP_163896534.1\|56341_56722_+	hypothetical protein	A0A088FUH8	Mycobacterium_phage	5.9e-12	34.4
WP_163905659.1\|56718_57048_+	WhiB family transcriptional regulator	NA	NA	NA	NA
WP_163896535.1\|57044_57380_+	hypothetical protein	NA	NA	NA	NA
WP_170307876.1\|57376_57517_+	hypothetical protein	Q854S9	Mycobacterium_virus	6.3e-12	65.9
WP_163896536.1\|57649_57865_+	helix-turn-helix domain-containing protein	A0A2R4AQF4	Mycobacterium_phage	2.5e-07	54.9
WP_163896537.1\|57857_58214_+	hypothetical protein	NA	NA	NA	NA
WP_163896538.1\|58214_58568_+	hypothetical protein	NA	NA	NA	NA
WP_163896539.1\|58567_59737_+	hypothetical protein	A0A0M4R1A2	Arthrobacter_phage	5.3e-19	32.7
WP_163896540.1\|59846_60314_+	hypothetical protein	NA	NA	NA	NA
WP_163905637.1\|60367_60649_+	flagellar hook-length control protein	G8I4U1	Mycobacterium_phage	2.5e-15	52.1
63699:63720	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1830575 : 1839419

Shahe_endorna-like_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163899515.1\|1830575_1831652_+	SDR family NAD(P)-dependent oxidoreductase	M1I3H4	Acanthocystis_turfacea_Chlorella_virus	3.2e-18	25.6
WP_163899518.1\|1831579_1832599_+	ATP-binding cassette domain-containing protein	A0A2R8FG22	Brazilian_cedratvirus	3.4e-14	28.7
WP_170307889.1\|1832595_1833351_+	ABC transporter permease	NA	NA	NA	NA
WP_170307890.1\|1833347_1834148_+	ABC transporter permease	NA	NA	NA	NA
WP_163899520.1\|1834149_1835430_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	6.7e-07	39.1
WP_163899522.1\|1835429_1836440_-	GDP-mannose 4,6-dehydratase	A0A1V0SAI6	Catovirus	3.4e-30	30.4
WP_163899524.1\|1836489_1837872_-	nucleotide sugar dehydrogenase	A7IV99	Paramecium_bursaria_Chlorella_virus	9.1e-18	23.9
WP_163899526.1\|1838150_1839419_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	7.3e-06	37.5

DBSCAN-SWA_3

2820040 : 2882336

Tupanvirus(25.0%)

holin,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163901053.1\|2820040_2821228_+\|protease	acid resistance serine protease MarP	NA	NA	NA	NA
WP_163901055.1\|2821231_2822206_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_170307933.1\|2822205_2822721_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_170307898.1\|2822863_2823577_+\|protease	serine protease	NA	NA	NA	NA
WP_163901059.1\|2823579_2825541_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.6e-84	39.9
WP_163901061.1\|2825654_2826431_+	oxidoreductase	NA	NA	NA	NA
WP_163901063.1\|2826860_2827718_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_163901065.1\|2828135_2829212_+	AAA family ATPase	NA	NA	NA	NA
WP_163901067.1\|2829208_2830384_+	TadA family conjugal transfer-associated ATPase	NA	NA	NA	NA
WP_163901069.1\|2830380_2831184_+	type II secretion system F family protein	NA	NA	NA	NA
WP_163901071.1\|2831180_2831753_+	type II secretion system F family protein	NA	NA	NA	NA
WP_163901072.1\|2831789_2831993_+	DUF4244 domain-containing protein	NA	NA	NA	NA
WP_163901074.1\|2832016_2832316_+	pilus biosynthesis protein TadE	NA	NA	NA	NA
WP_163901076.1\|2832200_2832656_+	flp pilus-assembly TadE/G-like family protein	NA	NA	NA	NA
WP_163901078.1\|2832665_2833673_-	DUF5593 domain-containg protein	NA	NA	NA	NA
WP_163901080.1\|2833735_2836060_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_003882601.1\|2836336_2836540_+	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	1.5e-14	56.2
WP_163901082.1\|2836670_2837261_+	hypothetical protein	NA	NA	NA	NA
WP_163901084.1\|2837396_2840198_+	type I DNA topoisomerase	J3E777	Acanthamoeba_polyphaga_lentillevirus	2.8e-98	31.9
WP_163901086.1\|2840311_2841898_-	HAMP domain-containing protein	A0A1B1IWY2	uncultured_Mediterranean_phage	1.0e-17	31.2
WP_163901089.1\|2841980_2843201_+	DNA polymerase III subunit delta'	NA	NA	NA	NA
WP_163901090.1\|2843673_2844318_+	hypothetical protein	NA	NA	NA	NA
WP_163906236.1\|2844353_2846078_-	hypothetical protein	NA	NA	NA	NA
WP_163901092.1\|2846127_2847105_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.2e-40	33.9
WP_163901094.1\|2847162_2848404_-	hypothetical protein	NA	NA	NA	NA
WP_163906238.1\|2848400_2849753_-	M1 family metallopeptidase	A0A2K9L1R3	Tupanvirus	2.1e-19	23.6
WP_163901096.1\|2849710_2853628_-	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	3.8e-37	24.6
WP_163901098.1\|2853938_2854967_+	TerC/Alx family metal homeostasis membrane protein	A0A291LBC5	Escherichia_phage	1.1e-36	34.0
WP_163901101.1\|2855238_2856516_+	acyltransferase family protein	NA	NA	NA	NA
WP_163906240.1\|2856544_2857093_-	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	2.6e-32	44.4
WP_163901103.1\|2857131_2858508_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
WP_163906242.1\|2858495_2859572_+\|protease	zinc-dependent metalloprotease	NA	NA	NA	NA
WP_163901105.1\|2859550_2860513_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_163901107.1\|2860524_2861145_+	hypoxanthine phosphoribosyltransferase	A0A1V0SEQ1	Hokovirus	5.9e-09	28.8
WP_163901109.1\|2861231_2863448_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_163901111.1\|2863567_2864314_-	SIMPL domain-containing protein	NA	NA	NA	NA
WP_163901114.1\|2864330_2865353_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_163901116.1\|2865352_2866543_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_170307934.1\|2866543_2867521_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_163901120.1\|2867758_2870080_+\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	3.2e-108	45.4
WP_163901122.1\|2870104_2870728_+	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	1.9e-44	53.4
WP_163901124.1\|2870724_2871591_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	2.4e-24	32.1
WP_163901127.1\|2871583_2871967_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_163901130.1\|2871963_2872476_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_163901132.1\|2872475_2872952_+	DUF3180 family protein	NA	NA	NA	NA
WP_163901134.1\|2873002_2874343_+	hypothetical protein	NA	NA	NA	NA
WP_163901136.1\|2874423_2875347_+	DUF2520 domain-containing protein	NA	NA	NA	NA
WP_163901138.1\|2875343_2876276_+	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_163901140.1\|2876275_2876683_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_163901142.1\|2876687_2877503_+	type III pantothenate kinase	NA	NA	NA	NA
WP_163901144.1\|2877514_2879026_+\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	3.5e-71	35.3
WP_163901146.1\|2879136_2879478_+	Lsr2 family protein	A0A160DEV0	Gordonia_phage	1.0e-15	45.7
WP_163901149.1\|2879792_2882336_+\|protease	ATP-dependent protease ATP-binding subunit ClpC	K4FB40	Cronobacter_phage	1.1e-130	40.3

DBSCAN-SWA_4

5475284 : 5484743

Mycobacterium_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163905616.1\|5475284_5475758_-	helix-turn-helix transcriptional regulator	G8I6R7	Mycobacterium_virus	4.3e-28	60.7
WP_163896508.1\|5475876_5476062_+	helix-turn-helix domain-containing protein	G8I6R8	Mycobacterium_virus	7.3e-16	73.6
WP_163906641.1\|5476250_5476901_+	phage antirepressor KilAC domain-containing protein	A0A088FW42	Mycobacterium_phage	1.4e-61	60.3
WP_163896509.1\|5476897_5477236_+	hypothetical protein	G1D4H2	Mycobacterium_virus	3.4e-35	74.3
WP_163905619.1\|5477232_5477628_+	hypothetical protein	NA	NA	NA	NA
WP_163905621.1\|5477624_5477948_+	hypothetical protein	NA	NA	NA	NA
WP_163905656.1\|5478147_5478507_+	hypothetical protein	A0A2R4AND3	Mycobacterium_phage	2.7e-46	76.6
WP_163896512.1\|5478503_5478806_+	hypothetical protein	M4W6X3	Mycobacterium_phage	1.2e-07	39.5
WP_163905623.1\|5479136_5479379_+	hypothetical protein	NA	NA	NA	NA
WP_163905625.1\|5479360_5479510_+	hypothetical protein	A0A076G7C1	Mycobacterium_phage	1.7e-10	62.5
WP_163896514.1\|5479506_5479791_+	hypothetical protein	NA	NA	NA	NA
WP_163896515.1\|5479787_5479925_+	hypothetical protein	NA	NA	NA	NA
WP_163905627.1\|5479921_5480164_+	hypothetical protein	NA	NA	NA	NA
WP_163896517.1\|5480156_5481098_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A2H4PCZ9	Mycobacterium_phage	4.3e-80	51.6
WP_163896518.1\|5481097_5482150_+	recombinase RecT	A0A0A7RVR2	Mycobacterium_phage	2.2e-112	65.6
WP_163905629.1\|5482146_5482359_+	hypothetical protein	NA	NA	NA	NA
WP_163905631.1\|5482392_5483238_+	DNA translocase FtsK	G8I6T3	Mycobacterium_virus	1.8e-80	54.6
WP_163896460.1\|5483234_5483597_+	hypothetical protein	A0A1D8EX57	Mycobacterium_phage	1.2e-14	41.4
WP_163905633.1\|5483649_5484111_+	RusA family crossover junction endodeoxyribonuclease	G8I6T4	Mycobacterium_virus	6.9e-47	63.9
WP_163896521.1\|5484101_5484374_+	hypothetical protein	A0A0F6WEQ5	Mycobacterium_phage	1.8e-15	59.3
WP_163905635.1\|5484398_5484743_+	hypothetical protein	G8I6T5	Mycobacterium_virus	2.5e-09	74.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP022599

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection