Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP022606 Mycobacterium branderi strain JCM 12687 2 crisprs cas3,csa3,DEDDh,DinG,cas4,WYL,c2c9_V-U4 0 1 4 0
NZ_AP022607 Mycobacterium branderi strain JCM 12687 plasmid pJCM12687 0 crisprs c2c9_V-U4 0 0 1 0

Results visualization

1. NZ_AP022606
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022606_1 1540073-1540198 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022606_2 3839146-3839224 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 MH509442 Mycobacterium phage Aminay, complete genome 40029-40057 3 0.897
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NC_016587 Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence 79947-79975 6 0.793
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NC_016586 Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence 323765-323793 7 0.759
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 774487-774515 7 0.759
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NC_008761 Polaromonas naphthalenivorans CJ2 plasmid pPNAP05, complete sequence 21218-21246 7 0.759
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP018096 Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence 38287-38315 7 0.759
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1038641-1038669 7 0.759
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP029359 Azospirillum sp. CFH 70021 plasmid unnamed4 165622-165650 7 0.759
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP013054 Sinorhizobium americanum CCGM7 plasmid C, complete sequence 31360-31388 7 0.759
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 779798-779826 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP030273 Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence 51632-51660 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 447340-447368 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 CP047033 Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence 45306-45334 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP047039 Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence 45290-45318 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP015213 Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence 89102-89130 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP012915 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence 1141917-1141945 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP051470 Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence 35068-35096 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP015290 Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence 19439-19467 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP032340 Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence 990461-990489 8 0.724
NZ_AP022606_2 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder 3839171-3839199 29 NZ_CP023064 Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence 27473-27501 8 0.724

1. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to MH509442 (Mycobacterium phage Aminay, complete genome) position: , mismatch: 3, identity: 0.897

tgattcgggccgacccgctgcgcccggct-	CRISPR spacer
tgattccggccgagccgctgcg-ccggctg	Protospacer
****** ****** ******** ****** 

2. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 6, identity: 0.793

-tgattcgggccgacccgctgcgcccggct	CRISPR spacer
atggtgt-cgccgacccgctgcggccggct	Protospacer
 **.* .  ************** ******

3. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 7, identity: 0.759

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tgatgcggggcgacccgctgcgccgtttc	Protospacer
**** **** **************   ..

4. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.759

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tgggcgaggccgacgcgctgcgcccggcc	Protospacer
**. . .******* *************.

5. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NC_008761 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP05, complete sequence) position: , mismatch: 7, identity: 0.759

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
aggatccggccgacccgctgcgcctggtc	Protospacer
 *. ** *****************.**..

6. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 7, identity: 0.759

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
cgcatcgggcagacccgctgcgccggggg	Protospacer
.*  ****** ************* **  

7. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.759

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tgggcgaggccgacgcgctgcgcccggcc	Protospacer
**. . .******* *************.

8. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP029359 (Azospirillum sp. CFH 70021 plasmid unnamed4) position: , mismatch: 7, identity: 0.759

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tcatccgggccgatccgctgcgccccctg	Protospacer
* **.********.***********  . 

9. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 7, identity: 0.759

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tttgccgggccgacccgccgcgcccgatt	Protospacer
*   .*************.*******..*

10. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tcgaccgggccgaccggctgcgcccgctg	Protospacer
* . .********** ********** . 

11. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP030273 (Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
ctcaacgggctgacccgcggcgcccggcc	Protospacer
.    *****.******* *********.

12. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tcgaccgggccgaccggctgcgcccgctg	Protospacer
* . .********** ********** . 

13. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to CP047033 (Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
ctcaacgggctgacccgcggcgcccggcc	Protospacer
.    *****.******* *********.

14. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP047039 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
ctcaacgggctgacccgcggcgcccggcc	Protospacer
.    *****.******* *********.

15. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP015213 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
ctcaacgggctgacccgcggcgcccggcc	Protospacer
.    *****.******* *********.

16. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tcgaccgggccgaccggctgcgcccgctg	Protospacer
* . .********** ********** . 

17. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP051470 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
ctcaacgggctgacccgcggcgcccggcc	Protospacer
.    *****.******* *********.

18. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP015290 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
ctcaacgggctgacccgcggcgcccggcc	Protospacer
.    *****.******* *********.

19. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tcgaccgggccgaccggctgcgcccgctg	Protospacer
* . .********** ********** . 

20. spacer 2.1|3839171|29|NZ_AP022606|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 8, identity: 0.724

tgattcgggccgacccgctgcgcccggct	CRISPR spacer
tttgccgggccgacccgccgcgcccgatc	Protospacer
*   .*************.*******...

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1231 : 13550 24 Mycobacterium_phage(83.33%) NA NA
DBSCAN-SWA_2 23804 : 60542 50 Mycobacterium_phage(69.23%) tail NA
DBSCAN-SWA_3 4542469 : 4550696 7 Mycobacterium_phage(33.33%) NA NA
DBSCAN-SWA_4 5030028 : 5039951 10 Mycobacterium_phage(28.57%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_AP022607
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 226682 : 235988 9 Mycobacterium_phage(66.67%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage