CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP022575	Mycobacterium shinjukuense strain JCM 14233	16 crisprs	DinG,csa3,RT,DEDDh,cas4,WYL,cas2,cas1,csb3,cas3,csb2gr5,cas7	12	28	0	0

1. NZ_AP022575

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022575_2

• CRISPR_ID: NZ_AP022575_2
• CRISPR_location: 64946-65112
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_AP022575_2

Consensus_repeat	Method
ACCCATGCCGCCGGCGCCGCCGGCGCCGCCGTCGCCGCCG	PILER-CR

spacers of NZ_AP022575_2

>2.1|64986|26|NZ_AP022575|PILER-CR
TTCCCACCGACCCCGCCCAACAGCCC
>2.2|65052|32|NZ_AP022575|PILER-CR
GCACCCTGCAGGACACCTGCCTGGCCATTTTG

CRISPR arrays and Neighbor proteins around NZ_AP022575_2

CRISPR arrays

The CRISPR arrays of NZ_AP022575_2

>merge|NZ_AP022575|2|64946-65112|PILER-CR
CGCCGGCGCCGCCGGCCCCGCCGTGGCCGCCGTTCCCACCGACCCCGCCCAACAGCCCACCCATGCCGCCGGCACCGCCGGCGCCGCCGGCGCCGCCGGCACCCTGCAGGACACCTGCCTGGCCATTTTGACCCATGCCGCCGGCGCCGCCGGCGCCGCCGTTGCCG

>NZ_AP022575|2|1|64946-65112|PILER-CR
CGCCGGCGCCGCCGGCCCCGCCGTGGCCGCCGTTCCCACC	GACCCCGCCCAACAGCCCACCCATGC
CGCCGGCACCGCCGGCGCCGCCGGCGCCGCCGGCACCCTG	CAGGACACCTGCCTGGCCATTTTGACCCATGC
CGCCGGCGCCGCCGGCGCCGCCGTTGCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083050192.1|79733_80753_+|OmpA-family-protein	unknown	unknown	gnl|CDD|143586
NZ_AP022575.1|WP_169715463.1|80766_80907_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083050199.1|83622_84885_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NZ_AP022575.1|WP_083050195.1|80906_81473_+|hypothetical-protein	unknown	unknown	gnl|CDD|184735
NZ_AP022575.1|WP_083051482.1|76493_77789_+|citrate-synthase	unknown	unknown	gnl|CDD|180164
NZ_AP022575.1|WP_083050197.1|81495_82836_-|two-component-system-sensor-histidine-kinase-PrrB	unknown	unknown	gnl|CDD|223715
NZ_AP022575.1|WP_083051182.1|56362_58093_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|215457
NZ_AP022575.1|WP_163662671.1|77845_79438_-|NAD(P)-binding-protein	unknown	unknown	gnl|CDD|224154
NZ_AP022575.1|WP_083051179.1|55323_56346_+|diiron-oxygenase	unknown	unknown	gnl|CDD|378680
NZ_AP022575.1|WP_083051192.1|58089_58548_-|VOC-family-protein	unknown	unknown	gnl|CDD|319910
NZ_AP022575.1|WP_083051170.1|51505_51937_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_AP022575.1|WP_083051175.1|53130_53895_-|DUF3071-domain-containing-protein	unknown	unknown	gnl|CDD|378619
NZ_AP022575.1|WP_083050189.1|79440_79617_-|DUF2630-family-protein	unknown	unknown	gnl|CDD|378515
NZ_AP022575.1|WP_083051177.1|54014_55145_-|phosphoserine-transaminase	unknown	unknown	gnl|CDD|130433
NZ_AP022575.1|WP_142272122.1|82847_83558_-|two-component-system-response-regulator-PrrA	unknown	unknown	gnl|CDD|223816
NZ_AP022575.1|WP_083051186.1|59972_60632_+|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl|CDD|235555
NZ_AP022575.1|WP_163662668.1|52778_53060_+|DUF2537-domain-containing-protein	unknown	unknown	gnl|CDD|378496
NZ_AP022575.1|WP_083051184.1|58746_59901_-|citrate-synthase-2	unknown	unknown	gnl|CDD|237070
NZ_AP022575.1|WP_083051172.1|51933_52782_+|RNA-methyltransferase	unknown	unknown	gnl|CDD|223640
NZ_AP022575.1|WP_083051484.1|65836_75856_-|PPE-domain-containing-protein	unknown	unknown	gnl|CDD|366325

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083050192.1|79733_80753_+|OmpA-family-protein	gnl|CDD|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	4.44039e-38
NZ_AP022575.1|WP_083050199.1|83622_84885_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.43509e-24
NZ_AP022575.1|WP_083050195.1|80906_81473_+|hypothetical-protein	gnl|CDD|184735	PRK14547, rplD, 50S ribosomal protein L4; Provisional.	6.06864e-06
NZ_AP022575.1|WP_083051482.1|76493_77789_+|citrate-synthase	gnl|CDD|180164	PRK05614, gltA, citrate synthase.	0
NZ_AP022575.1|WP_083050197.1|81495_82836_-|two-component-system-sensor-histidine-kinase-PrrB	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.0933e-44
NZ_AP022575.1|WP_083051182.1|56362_58093_+|FAD-dependent-oxidoreductase	gnl|CDD|215457	PLN02852, PLN02852, ferredoxin-NADP+ reductase.	1.84073e-135
NZ_AP022575.1|WP_163662671.1|77845_79438_-|NAD(P)-binding-protein	gnl|CDD|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	3.886e-67
NZ_AP022575.1|WP_083051179.1|55323_56346_+|diiron-oxygenase	gnl|CDD|378680	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF. This family is a metalloenzyme which is involved in the biosynthesis of antibiotic aureothin by catalyzing the formation of p-nitrobenzoic acid from p-aminobenzoic acid. AurF is a non-heme di-iron monooxygenase which creates nitroarenes via the sequential oxidation of aminoarenes.	3.59928e-124
NZ_AP022575.1|WP_083051192.1|58089_58548_-|VOC-family-protein	gnl|CDD|319910	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.76707e-56
NZ_AP022575.1|WP_083051170.1|51505_51937_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.13325e-24
NZ_AP022575.1|WP_083051175.1|53130_53895_-|DUF3071-domain-containing-protein	gnl|CDD|378619	pfam11268, DUF3071, Protein of unknown function (DUF3071). Some members in this family of proteins are annotated as DNA-binding proteins however this cannot be confirmed. Currently no function is known.	7.65921e-72
NZ_AP022575.1|WP_083050189.1|79440_79617_-|DUF2630-family-protein	gnl|CDD|378515	pfam10944, DUF2630, Protein of unknown function (DUF2630). This bacterial family of proteins have no known function.	2.91762e-11
NZ_AP022575.1|WP_083051177.1|54014_55145_-|phosphoserine-transaminase	gnl|CDD|130433	TIGR01366, Putative_phosphoserine_aminotransferase_PSAT., phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria. [Amino acid biosynthesis, Serine family].	0
NZ_AP022575.1|WP_142272122.1|82847_83558_-|two-component-system-response-regulator-PrrA	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.51068e-82
NZ_AP022575.1|WP_083051186.1|59972_60632_+|pyridoxamine-5'-phosphate-oxidase	gnl|CDD|235555	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase.	1.84706e-103
NZ_AP022575.1|WP_163662668.1|52778_53060_+|DUF2537-domain-containing-protein	gnl|CDD|378496	pfam10801, DUF2537, Protein of unknown function (DUF2537). This bacterial family of proteins has no known function.	2.24173e-16
NZ_AP022575.1|WP_083051184.1|58746_59901_-|citrate-synthase-2	gnl|CDD|237070	PRK12350, PRK12350, citrate synthase 2; Provisional.	0
NZ_AP022575.1|WP_083051172.1|51933_52782_+|RNA-methyltransferase	gnl|CDD|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	1.72977e-63
NZ_AP022575.1|WP_083051484.1|65836_75856_-|PPE-domain-containing-protein	gnl|CDD|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	5.77739e-79

Protein sequences

>NZ_AP022575.1|WP_083051186.1|59972_60632_+|pyridoxamine-5'-phosphate-oxidase
MAGPDDQYLTGMRVEYGSTEQDGSPDLDADWLADGWLALFRKWIDDAERAGLAEPNAFVLATVAAGRPVSRSVLCKSADETGITFFTNYDSAKGAELAATPYASATFPWYRLGRQVHIRGPVSRVDRQLTQQYWAQRPRGSQLGAWASHQSRPIASRAALLHQLAKVTARFADEAHIPVPPNWGGYRIAPEVVEFWQGRENRLHNRIRVIGDRIERLQP
>NZ_AP022575.1|WP_083051184.1|58746_59901_-|citrate-synthase-2
MTVVPENFVAGLEGVVAFTTEIAEPDKDGGALRYRGVDIEDLVRHRVTFGDVWGLLVDGKFGNGLPPAEPFPLPIHTGDVRVDVQAGLAMLAPIWGYAPLLDTDDATARDQLARASVMALSYVAQSARGIYQPAVPQRVIDECSTVTARFMTRWQGEPDPRHVEAIDAYWVSAAEHGMNASTFTARVIASTGADVAAALSGAIGAMSGPLHGGAPARVLPMLEEVERSGDARGLVKGILDRGEKLMGFGHRVYRAEDPRARVLRATAERLNAPRYEVAVALEQAALAELRERRPDRAIETNVEFWAAVILDFARVPAKMMPAMFTCGRTAGWCAHILEQKRLGKLVRPSAIYVGPGPRSPESVEGWDRVRLPARVCDANGGDGR
>NZ_AP022575.1|WP_083051192.1|58089_58548_-|VOC-family-protein
MTITVEPAVSPHLVVDDAAAAIDFYVKAFDAVELGRVPRPDGKLVHAAVKINGFLVMLNDDFPEICGGKSMTPKSLGGTPVTIHLTVTDVDAKFQRAVDAGATVVMPLEDQFWGDRYGVIADPFGHHWSLGQPVREVSMEEIQEAMSAQPGG
>NZ_AP022575.1|WP_083051182.1|56362_58093_+|FAD-dependent-oxidoreductase
MPHVITQSCCNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVNACPVGAIAPDNRLDVRQLPFVEINASYYAPPVAGVKPPPTSKLAPVLPAAAVHVGRQPLTVAIVGSGPAAMYAADELLVQPGVRVNVFEKLPTPYGLVRAGVAPDHPNTKRVTQLFDRVARDRRFRFFLNVEIGKHLRHAELLAHHHAVLYAVGAPNDRRLDIDGMGLPGTGTATALVAWINGHPDFAHLPVDLGHERVVIIGNGNVALDVARVLTADPDDLARTDIADHALRALRSSAVREVVIAARRGPAYSAFTLPELVGLTGACDVVLDAGDHRRVLDDRATVSDPLTRSKLDVLATLGSPGEGGPASAPGIGRRRIRLAYRLTPRRVLGQRRAGGVEFAVTGTDELRRIDAGLVLTSIGYRGRPIRDLPFDESAAVVPNDGGRVVDPDTGQPVSGAYVAGWIKRGPTGFIGTNKSCSLQTVQALVADFNAGKLTDPVAKPAALAKLVRARQPEVVDSLGWRAIDAAEVARGADDGRPRVKFTATADMLAAAASAQRASPPARRLLARLRDLAEPMVS
>NZ_AP022575.1|WP_083051179.1|55323_56346_+|diiron-oxygenase
MARTRMVRRWRRNMEVRDDLEYVEKLATLSEGSVRRNFNPYTDIDWGSPEFAVTDNDPRWILPAADPLGRHPWYQAQSPQRQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMMFQEMVNRVGADVPGMPRRLRWISPLVPLLAGPLPVAFFIGVLAGEEPIDHTQKQVLREGKALHPIMERVMAIHVAEEARHISFAHEYLRKRLPRLTRAQRFWISLYFPLTMRSLCNAIVVPPKEFWRQFDIPREVKKELFFRSPESRKWLRDMFADVRMLAYDTGLMNPIARLVWRMCKIHGKPSRYRSEPQRQLLASAPAA
>NZ_AP022575.1|WP_083051177.1|54014_55145_-|phosphoserine-transaminase
MADQLTPHLEIPANLKPRDGRFGSGPSKVRPEQLKALTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSVPAGYQVILGNGGATAFWDAAAFGLIDTRSLHLSYGEFSSKFASAVAKNPFIADPVVITADPGGAPQPQSDPAVDVIAWAHNETSTGVAVPVRRPEGSGDALVVIDATSAAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALARVEAIAAAGRWVPDFLSLPIAIENSLKNQTYNTPAIGTLALLAEQIDWLLGNGGLDWAVKRTADSSQRLYCWAQARPYTTPFVTDPGLRSQVVGTIDFTDDVDAAAVAATLRANGIVDTEPYRKLGRNQLRVAMFPAVDPDDVSALTECVDWVVERL
>NZ_AP022575.1|WP_083051175.1|53130_53895_-|DUF3071-domain-containing-protein
MRELKMVGLDADGTYLICEGANPAERFKLPVDERLRAALRGDALPPEQPQLAIDVTNMLSPKEIQARIRAGASVEQVAAASGSDIARIKRFAHPVLLERARAAELATAAHPLLADGPAVLTLLETVTSAFVTRGLRTDGLSWDAWRNEDSRWTVRLAWQAGRSDNVAHFRFTPGSHGGTVTAIDDAASELIDPDFKPPLRPLAPVAHLAFDAVQHPARPAPAAPSEPSASGRRGKPAVPAWEDVLLGVRTGGRG
>NZ_AP022575.1|WP_163662668.1|52778_53060_+|DUF2537-domain-containing-protein
MNHERGQSTPWATGLAVAGFVAAVIGVGVVVLSLGLIRVHPLLALGLNIVAAGGLAPTLWGWRRTPVLRWFVLGAGLGVAGAWLALLASTVLG
>NZ_AP022575.1|WP_083051172.1|51933_52782_+|RNA-methyltransferase
MSAPGRVPDVDVQDVNDPDDPRLDSFRDLNSVDRRPDLPTGKGLVIAEGVLVVRRMLASRFTPFALLGTDRRLVELGDDLAAARGVDAPYYRVSADVMARVVGFHLNRGVLAAARRVPEPRVAQVIAGARTVAVLEGVNDHENLGSIFRNAAGLGVDAVVFGSGCADPLYRRAVRVSMGHALLVPYARSRDWPADLRMLREHGFRLLAMTPRGDTCTLPEAMATVRDQRIALLVGAEGPGLTAAALRLSDLRVRIPMSRGIDSLNVATAAALAFYERVRLAR
>NZ_AP022575.1|WP_083051170.1|51505_51937_+|MarR-family-transcriptional-regulator
MPDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALTTLVNEGAMTPGALAIRERVRPPSMTRVIASLADMGFVVRVPHPVDGRQVLVSVSKSGAELVQAARRARQEWLAERLATLDSGQRDILRSAADLISALVDDSP
>NZ_AP022575.1|WP_083051484.1|65836_75856_-|PPE-domain-containing-protein
MDYTLLPPEINSARLFLGAGLEPLLNAAAGWQGLATELGSAAASFSSVTSGLADTAWRGAASAAMTRAAAPYLEWLSTATMRAEQAATQVRMTAAAFEAALAATVRPSVISANRSQFRSLVLSNLLGQNAPAIAAIEAQYEQMWAQDVAAMLGYHAAASAAVSELTPFASGLLADLQGQLVGAASAVGASLAHTAAAGAAPAAGPGAAQATVLRVAGFNLGFANIGFPNVGNANIGDYNVGSANIGSNNIGFGNTGNGNIGFGNTGSHNIGFGNTGSGNFGLGNFGFGNTGFANSGDNNLGIGLTGSNLAGFGLAGGLNSGTGNVGLFNSGTGNIGIGNSGTGNFGIGNTGSLNTGIGNSGSVNTGFFNSGIANTGVGNSGNYNTGSFNPGTGNTGGFNAGDHNTGYFNTGNHNTGFANSGDVNTGAFIYGNYSNGFLWRGNYQGLFFGGPGFGNSTTVPSSGFFNTGAGSASGFFNTGANNSGFFNTSLGATGNSGFANVGVLVSGLVNSGNTMSGLINLSMVNVTTPANVSGVFNAGRNVSGAFLRINLLNVGLANQGVGNILGNANLGNYNIFANANLGDYNIFGSGNFGSYNLFGDGNIGSHNVGGGNIGDANFGLGNLGSHNFGFGNAGSGNIGFGNAGSGNIGFGNTGNGNVGFGNTGNNNVGIGFTGSNLVGFGGLNSGSGNIGLLNSGTNNVGLFNAGTGNVGIANSGTGNRGLLNAGIGNWGVENPGTGNTGVGNAGHYNTGFYNAGGVNTGLYNTGSYNTGSFNVGSTNTGGFNPGNTNTGHFNTGNINTGFFNTGDVNTGAFNTGNFNNGFFMLGDNQGQIAIDLSVTIPYMPINMQMIIPVNMAIPLGGMPIPLTVAGTVFPRIDYLGGLFFFGPVVLGASTITVPPIVLTIGGPDVAIPLSIVGALEGGTITLLNIPAGPGFGNSTTSPSSGFFNSGAGGTSGFQNFGGSSSGIWNGGVGNVIGNSGFLNFGSLQSGWANLGSSVSGFSNTGLAGLVAPANVSGLFNTGSNLVGLFHDQVGGMSAFSLGLGNLGQLNLGSGNSGNFNLGSGNIGSFNLGSGNFGNANVGFGDLGNNNFGFGNTGNGNIGFGNTGSGNIGFGNTGDGNIGFGNTGNNNVGIGFIGSNLVGFGGWNSGSGNIGLFNSGTDNVGVGNSGTGNLGVGNTGSGNAGLGNTGGANTGFFNSGDVNTGFFNSGSVNTGIGNAGDYNTGSFNAGNFNTGGLNPGSYNTGYLNTGTYNTGLANSGDINTGFFISGNYSNGLLWKGDYQGLWGAHYTIHVPEIPAHVEVSVPINIPITANVTETLFSGITLRSVNFGFGVPLGPVPLAHGVIDSVTVPPIRAFGPSISFNIGDPEGSTVVRVPVTASIGPVDWTLVHIPTATGFFNSTTSPSSGFFNGGGGTVSGIANIGANISGIQNLADFGTSGFRNHGALQSGLANLGNTVSGLFNTGIATPANVSGMSNIGGNLAGFFHSQVAGTSTFNVGLGNVGAYNLGFGNLGDYNVGWADLGNANVGFGNTGSGNVGFGNNGSHNVGFGNTGSGNIGFGNTGSGNIGFGNTGNSNVGIGLTGSGQLGFGALNSGSGNIGLFNSGTGNVGIGNSGTGNLGVGNTGSRNTGMGNTGSTNTGFFNSGSVNTGIGNAGNDNTGSFNVGSFNTGGLNPGSYNTGYLNTGNYNTGLANSGNVDTGAFISGNYSNGLLWTGDHQGLWGYSSTGTIPDTAIPMHLHVPIYLDIPISGTLGTVTVESFTIPAVTVHATFFDNIPSRILDTRPITISSITIALPAIGVHIGAGPGPLIDIVGAGDLLPVKLPPIDIPARPGFGNTTGTPSSGFFNSGTGTVSGVGNVGGNISGFFNLSSGTSGMSGYQNVGELVSGVSNFGNTISGFFNPGTNTGSNLAGLLLANPLANVGVANIGGDNIGSGNVGAFNFGYGNVGTANLGSGNIGSHHFGFGNAGSGNIGPGNFGNDNLGLGNLGNHNFGFGNAGSNNLGFANTGSNNIGIGLTGDNNIGIGLTGSGQIGFGALNSGSGNVGLFNSGSGNVGLFNAGSGNVGLFNAGTANWGIGNPGIGNVGIGNSGTGNWGLWNPGTGNTGIANAGNYNTGIANAGSTNTGIANPGNYNTGSFNTGSTNTGNYNTGNYNTGSFNTGDYNTGLANSGNVNTGAFNAGNYSNGVFWRGDFQGLWGAHVEINIPEFPLVNMDLNVPINIPIHLDLDSFALENGLTISPIVINGAGIVDYTIGPIIIPPITGTLPVIDVTVGGPTTSLPIAIRSGVGPIRIVLLDIPPAPGFGNSSSTPSSGFFNSGAGSASGFGNVGGNNSGFWNSASASMGNSGFQNFGSLQSGWANLGNVVSGFHNTGTANLTVAANLSGWSTTGTDLAGLFRGPTGTTMVNLGLADLGRWNVGSGNFGDFNVGSGNVGAYNFGLGNQGAANFGFGDVGSNNLGFGNLGSSNIGFGNTGSHNIGFGNTGSGNFGIGLTGSGNIGIGLSGTGQVGVGALNSGTGNIGLFNSGTGNIGIGNSGSGNFGIGNSGTGNTGIGNAGAYNTGLYNTGHYNTGIANPGDYNTGLYNTGHYNTGIANPGDYNTGLYNTGHYNTGIANSGDFDTGGFISGDMNNGFFWRADRQGLLAANYTVTVDSVSAFLTVDVPVNIPIVGTITDISIPAITIPVINARGDLDLGIFGGTITAPMGPIHIHGGDDSAPLNTPIVINFGPQPAININIGNPDGSTVIHILATGGLGPIHIPLINLEPQPGFFNATIGPSSGFLNWGAGSASGWQNFGNNSGFYNVATAAMGNSGFQNYGSLQSGWANLGSTVSGLFNTGLGTPSPVSGFNNVGADLAGWLQHGPSATFNLGLANLGLGNLGSGNIGSHNFGLGNLGTYNLGSGNIGSHNLGSGNIGSVNIGFGNSGPALTAAVQNLGFGNTGSFNIGFGNTGNANIGLGNTGNGNIGIGLSGDMQVGIGGFNTGSGNFGLFNSGTDNIGFFNSGTGNWGIGNSGSYNTGIGNTGSTNTGFFNTGLVNTGIGNAGNYNTGLYNVGNTNTGSFNPGSFNTGGFNTGGYNTGYFNTGNANTGIGNSGNVDTGFFISGNYSNGAFWRGDYQGLGGFAYQITIPDIPWSYTVDSNIEIPIRGAINAVTQEMFTVEEFDIPISLITRICDPFTGECVTVTTPIITQHIGPFTVDLSVLNPETPIDMVFSLPIEPGTGSVGPFTIGFGWQQTPGFFNSTSSPSSGFFNSGAGGASGFFNNVAGAVSGFGNAVTQNSGFFNVAGQGNSGFQNFGNLQSGWANAGNVLSGFYNASTLGLLQGYISGFGNIGTKLSGFLNIGVGS
>NZ_AP022575.1|WP_083051482.1|76493_77789_+|citrate-synthase
MADTDDTATLRYPGGELDLQIVRASEGNDGIALGPLLAKTGYTTFDVGFVNTASTKSAITYIDGDAGILRYRGYPIEQLAEKSTFIEVSYLLIYGELPNTEQLAEFTHRIQRHTMLHEDLKRFFDGFPRNAHPMPVLSSVVNALSAYYQDALDPMDNGQVELSTIRLLAKLPTIAAYAYKKSVGQPFLYPDNSLTLVENFLRMTFGLPAEPYQPDPEVVRALDMLFILHADHEQNCSTSTVRLVGSSRANLFTSISGGINALWGPLHGGANQAVLEMLENIRQSGDDVGEFVRKVKNREAGVKLMGFGHRVYKNYDPRARIVKEQADKILAKLGGDDDLLNIAKGLEEAALTDDYFIERKLYPNVDFYTGLIYRALGFPTRMFTVLFALGRLPGWIAHWREMHDEGDSKIGRPRQIYTGYTERAYLSIDAR
>NZ_AP022575.1|WP_163662671.1|77845_79438_-|NAD(P)-binding-protein
MAVDGPREFDAVVVGGGHNGLVAAAYLARAGLAVRVLERLGHVGGAAVSAQAFDGVEVRVSRYAYLVSLLPSRIVDDLGATVRLARRRFSSYTPDPATAGRSGLLIGRHGTFAAIGDDGDHRGFAAFYRRCRLVTEHLWPTLMQPLPTRAQAHRKVLDRGDPEAAAAWHALVDEPIGHAITEAVRSDLVRGVIATDALIGTFARLGDPSLAPNVCLLYHVLGGGTGDWDVPVGGMGALTSALATAAVRHGAEITTGADVFAVNPDGEVRYRSRGGEHLIRGRFVLAGVTPTVLAGLLGEPEPPLAPGAQVKVNMVVRRLPRLRDDRVTPDQAFAGTFHVNETWCQLDAAYSRAAGRRLPDPLPCEAYCHSLTDPSVLSPGLRAAGAHTLTVFGLHTPHSVFGAVDPDTLRHRLTESVLASLNSVLAEPIQQVLMADAHGRPCVETATTADLQHTLQMTAGNIFHGALCWPFADDDDPLDTPARQWGVATEHERIMLCGSGARRGGAVSGIGGHNAAMAVLASLASRRKSP
>NZ_AP022575.1|WP_083050189.1|79440_79617_-|DUF2630-family-protein
MAARATSTDTDTRARRPIEIDPDRCCDLLRLRRSPRETGGDPPVATVRPVDQIEGYTG
>NZ_AP022575.1|WP_083050192.1|79733_80753_+|OmpA-family-protein
MAGSKVGVGEPAAPTDARRTPRFRRRPLGRSWWIGLLVIPLLIAAIGYGAFERPRSVTGPTGDLPTLATASATPSVAGPSLSLLSISRSGNTITLIGDFPDDAAKAALIKALQGLLTPGVNVIDQIRIDPLARALDFSNAEPVFTAGVPIPDFGLKVERDTITLTGTAGSPDQKDAVERAVANAWDGVNVANKIEVKGQAPATGTAGPTPPPPGTAAPGPCADLQSAINAVTGGPIAFAGDGVSLTPADEQILARVADKLKACPEARVTINGYTDNSGSEFLNIPLSAQRASTVADFLIAHGVARDRVAAKGLGSMNPIASNDTPEGRAKNRRAEIVVG
>NZ_AP022575.1|WP_169715463.1|80766_80907_+|hypothetical-protein
MGFVIQWLCYLVAFLAGSAVAWVVGVSITRSGDDEPVAAPPEAGRP
>NZ_AP022575.1|WP_083050195.1|80906_81473_+|hypothetical-protein
MDQVHWWLAALAFGLGMVLTLVLMVQPANEQVPVGTSRTRTGGSGAQPHRPTAKKPAPAHKATAPRTNKKAVTKDSPPKKAPARNQLSTTTIADAKESARERISVAKASPTMQARTLPFAPYGRGSARAGPDGGGPAGWLVKGRSDTRLYYTPDDPAYDSIVAQVWFRDEAAAARAFFTPWAKSARRK
>NZ_AP022575.1|WP_083050197.1|81495_82836_-|two-component-system-sensor-histidine-kinase-PrrB
MNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGFAIPFVPRGLDEIPRSPNDRDALITVRSGNVIKSNSDITLPRLQADYADTYIRGVRYRVRTVEIPGPEPTSVAVGATYDTTIAETNNLHRRVLLICAFAIGAAAVFAWLLAAFAVRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEAMRGMLQRIWNEQNRTKEALASARDFAAVSSHELRTPLTAMRTNLEVLSTLDLPEDQRKEVLNDVIRTQSRIEATLSALERLAQGELSTSEDHVPVDITELLDRAAHDAMRIYPDLDVSLVPSPTCIIVGLPAGLRLAVDNAIANAVKHGGATRVQLSAVSSRAGVEIAIDDNGSGVPEDERTVVFERFSRGSTASHSGSGLGLALVAQQAQLHGGTASLDSSPLGGARLLLKLPGPS
>NZ_AP022575.1|WP_142272122.1|82847_83558_-|two-component-system-response-regulator-PrrA
MSDMDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVRALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAHGGPRLLHTVRGVGFVLRMQ
>NZ_AP022575.1|WP_083050199.1|83622_84885_-|MFS-transporter
MPFQEIPPPRYCGRDRAALQTVNFFMADMEAGMGPFLGVLLASRGWTTGAIGAVITLGAIVGMVAVGPAGALVDATHRKRACVIVVGLAAVAASAVILTSRQFWVVAGAQAVMCISGATIAPAVIGITLGVVGQAGFTAQNGRNQAYNHAGNMVGAAASGLLGWLFGYGGVFWLAVGFAVVTIVAVLAIPGARIDHHVARGEPPAGEVPVSAMRVLLRSRPLLALAAALVLFHLGNAAILPFYGLAVVATHANPFATVASTVVVAQAVMIVAALVAMRIAQTRGYWLAILIAFTVLPVRGLLAAAVITTWGVIPVQVLDGIGAGMLSVAVPGLVARILDGTGHINVGQGAIMAAQGLGGALSPLLGGVVAQHLGFPVAFAMLGAVSLGSLIIWLGLASLLRPPARAVAKRQDVHDSEAIV

Crispr_ID: NZ_AP022575_1

• CRISPR_ID: NZ_AP022575_1
• CRISPR_location: 64000-64689
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 11 spacers

Consensus repeat of NZ_AP022575_1

Consensus_repeat	Method
CCGTNGCCGCCGNNGCCGCCG	CRT

spacers of NZ_AP022575_1

>1.1|64021|63|NZ_AP022575|CRT
GCACCGGCGGCGCTGATGCCGCCATTGCCGCCACCACCGCCGTTGCCGCCGTCGCCGCCCGAG
>1.2|64105|54|NZ_AP022575|CRT
TCGCCGCCATTGCCCCCGATGCCGCCAGTGCCGCCGGCGATGGTGCCGGTGCCG
>1.3|64180|33|NZ_AP022575|CRT
TCGCCTCCGTCGTGACCCAAGACGGCGGCGGCC
>1.4|64234|45|NZ_AP022575|CRT
GTGCCGCCGACGCCTGCGGACCCGGTGCCGGCGCCGCCGTTGCCG
>1.5|64300|30|NZ_AP022575|CRT
TCGCTGCCGCCGCCAAACGCCGTGAAGCCG
>1.6|64351|18|NZ_AP022575|CRT
CGGCCGCCGGCGATGGTG
>1.7|64390|42|NZ_AP022575|CRT
TTGCCTCCATCGCCGGTGCCACCAAAGCCGCCGCCGGTGCCG
>1.8|64453|24|NZ_AP022575|CRT
TAGCCGCCGTAGCCGCCGTTGCCT
>1.9|64498|42|NZ_AP022575|CRT
CCACCAGCAGGGTCGACGACCACGGTGTTACCGCCGGTGCCG
>1.10|64561|51|NZ_AP022575|CRT
GTGCCCGCGCTGCCGCCGAAGCCCCCGCTCCCGGCCAGGCCGCCCGTCCCG
>1.11|64633|36|NZ_AP022575|CRT
GTTCCGGCGAGGCTTCCGCCCAGACCGCCGATGCCG

CRISPR arrays and Neighbor proteins around NZ_AP022575_1

CRISPR arrays

The CRISPR arrays of NZ_AP022575_1

>merge|NZ_AP022575|1|64000-64689|CRT
CCAGCACCGCCAGCACCGCCTGCACCGGCGGCGCTGATGCCGCCATTGCCGCCACCACCGCCGTTGCCGCCGTCGCCGCCCGAGCCAGCACCGCCGTTGCCGCCGTCGCCGCCATTGCCCCCGATGCCGCCAGTGCCGCCGGCGATGGTGCCGGTGCCGCCGGTGCCGCCGTTGCCGCCGTCGCCTCCGTCGTGACCCAAGACGGCGGCGGCCCCGTTGCCGCCGTTGCCGCCGGTGCCGCCGACGCCTGCGGACCCGGTGCCGGCGCCGCCGTTGCCGCCGTTGCCGCCGTTGCCTCCGTCGCTGCCGCCGCCAAACGCCGTGAAGCCGCCGTTGCCGCCGTTGCCGCCGCGGCCGCCGGCGATGGTGCCGTTGCCGCCGTTGCCGCCGTTGCCTCCATCGCCGGTGCCACCAAAGCCGCCGCCGGTGCCGCCGTTGCCGCCGGTGCCGCCGTAGCCGCCGTAGCCGCCGTTGCCTCCGTCGCCGCCGCGGCCGGCGCCACCAGCAGGGTCGACGACCACGGTGTTACCGCCGGTGCCGCCGTCGCCGCCGTCGCCACCGGTGCCCGCGCTGCCGCCGAAGCCCCCGCTCCCGGCCAGGCCGCCCGTCCCGCCGTCGCCGCCGCGCCCGCCGGTTCCGGCGAGGCTTCCGCCCAGACCGCCGATGCCGCCGTCGCCGCCGCGTCCGCCG

>NZ_AP022575|1|1|64000-64689|CRT
CCAGCACCGCCAGCACCGCCT	GCACCGGCGGCGCTGATGCCGCCATTGCCGCCACCACCGCCGTTGCCGCCGTCGCCGCCCGAG
CCAGCACCGCCGTTGCCGCCG	TCGCCGCCATTGCCCCCGATGCCGCCAGTGCCGCCGGCGATGGTGCCGGTGCCG
CCGGTGCCGCCGTTGCCGCCG	TCGCCTCCGTCGTGACCCAAGACGGCGGCGGCC
CCGTTGCCGCCGTTGCCGCCG	GTGCCGCCGACGCCTGCGGACCCGGTGCCGGCGCCGCCGTTGCCG
CCGTTGCCGCCGTTGCCTCCG	TCGCTGCCGCCGCCAAACGCCGTGAAGCCG
CCGTTGCCGCCGTTGCCGCCG	CGGCCGCCGGCGATGGTG
CCGTTGCCGCCGTTGCCGCCG	TTGCCTCCATCGCCGGTGCCACCAAAGCCGCCGCCGGTGCCG
CCGTTGCCGCCGGTGCCGCCG	TAGCCGCCGTAGCCGCCGTTGCCT
CCGTCGCCGCCGCGGCCGGCG	CCACCAGCAGGGTCGACGACCACGGTGTTACCGCCGGTGCCG
CCGTCGCCGCCGTCGCCACCG	GTGCCCGCGCTGCCGCCGAAGCCCCCGCTCCCGGCCAGGCCGCCCGTCCCG
CCGTCGCCGCCGCGCCCGCCG	GTTCCGGCGAGGCTTCCGCCCAGACCGCCGATGCCG
CCGTCGCCGCCGCGTCCGCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083050192.1|79733_80753_+|OmpA-family-protein	unknown	unknown	gnl|CDD|143586
NZ_AP022575.1|WP_169715463.1|80766_80907_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083050199.1|83622_84885_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NZ_AP022575.1|WP_083050195.1|80906_81473_+|hypothetical-protein	unknown	unknown	gnl|CDD|184735
NZ_AP022575.1|WP_083051482.1|76493_77789_+|citrate-synthase	unknown	unknown	gnl|CDD|180164
NZ_AP022575.1|WP_083050197.1|81495_82836_-|two-component-system-sensor-histidine-kinase-PrrB	unknown	unknown	gnl|CDD|223715
NZ_AP022575.1|WP_083051182.1|56362_58093_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|215457
NZ_AP022575.1|WP_163662671.1|77845_79438_-|NAD(P)-binding-protein	unknown	unknown	gnl|CDD|224154
NZ_AP022575.1|WP_083051179.1|55323_56346_+|diiron-oxygenase	unknown	unknown	gnl|CDD|378680
NZ_AP022575.1|WP_083051192.1|58089_58548_-|VOC-family-protein	unknown	unknown	gnl|CDD|319910
NZ_AP022575.1|WP_083051170.1|51505_51937_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_AP022575.1|WP_083051175.1|53130_53895_-|DUF3071-domain-containing-protein	unknown	unknown	gnl|CDD|378619
NZ_AP022575.1|WP_083050189.1|79440_79617_-|DUF2630-family-protein	unknown	unknown	gnl|CDD|378515
NZ_AP022575.1|WP_083051177.1|54014_55145_-|phosphoserine-transaminase	unknown	unknown	gnl|CDD|130433
NZ_AP022575.1|WP_142272122.1|82847_83558_-|two-component-system-response-regulator-PrrA	unknown	unknown	gnl|CDD|223816
NZ_AP022575.1|WP_083051186.1|59972_60632_+|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl|CDD|235555
NZ_AP022575.1|WP_163662668.1|52778_53060_+|DUF2537-domain-containing-protein	unknown	unknown	gnl|CDD|378496
NZ_AP022575.1|WP_083051184.1|58746_59901_-|citrate-synthase-2	unknown	unknown	gnl|CDD|237070
NZ_AP022575.1|WP_083051172.1|51933_52782_+|RNA-methyltransferase	unknown	unknown	gnl|CDD|223640
NZ_AP022575.1|WP_083051484.1|65836_75856_-|PPE-domain-containing-protein	unknown	unknown	gnl|CDD|366325

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083050192.1|79733_80753_+|OmpA-family-protein	gnl|CDD|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	4.44039e-38
NZ_AP022575.1|WP_083050199.1|83622_84885_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.43509e-24
NZ_AP022575.1|WP_083050195.1|80906_81473_+|hypothetical-protein	gnl|CDD|184735	PRK14547, rplD, 50S ribosomal protein L4; Provisional.	6.06864e-06
NZ_AP022575.1|WP_083051482.1|76493_77789_+|citrate-synthase	gnl|CDD|180164	PRK05614, gltA, citrate synthase.	0
NZ_AP022575.1|WP_083050197.1|81495_82836_-|two-component-system-sensor-histidine-kinase-PrrB	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.0933e-44
NZ_AP022575.1|WP_083051182.1|56362_58093_+|FAD-dependent-oxidoreductase	gnl|CDD|215457	PLN02852, PLN02852, ferredoxin-NADP+ reductase.	1.84073e-135
NZ_AP022575.1|WP_163662671.1|77845_79438_-|NAD(P)-binding-protein	gnl|CDD|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	3.886e-67
NZ_AP022575.1|WP_083051179.1|55323_56346_+|diiron-oxygenase	gnl|CDD|378680	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF. This family is a metalloenzyme which is involved in the biosynthesis of antibiotic aureothin by catalyzing the formation of p-nitrobenzoic acid from p-aminobenzoic acid. AurF is a non-heme di-iron monooxygenase which creates nitroarenes via the sequential oxidation of aminoarenes.	3.59928e-124
NZ_AP022575.1|WP_083051192.1|58089_58548_-|VOC-family-protein	gnl|CDD|319910	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.76707e-56
NZ_AP022575.1|WP_083051170.1|51505_51937_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.13325e-24
NZ_AP022575.1|WP_083051175.1|53130_53895_-|DUF3071-domain-containing-protein	gnl|CDD|378619	pfam11268, DUF3071, Protein of unknown function (DUF3071). Some members in this family of proteins are annotated as DNA-binding proteins however this cannot be confirmed. Currently no function is known.	7.65921e-72
NZ_AP022575.1|WP_083050189.1|79440_79617_-|DUF2630-family-protein	gnl|CDD|378515	pfam10944, DUF2630, Protein of unknown function (DUF2630). This bacterial family of proteins have no known function.	2.91762e-11
NZ_AP022575.1|WP_083051177.1|54014_55145_-|phosphoserine-transaminase	gnl|CDD|130433	TIGR01366, Putative_phosphoserine_aminotransferase_PSAT., phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria. [Amino acid biosynthesis, Serine family].	0
NZ_AP022575.1|WP_142272122.1|82847_83558_-|two-component-system-response-regulator-PrrA	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.51068e-82
NZ_AP022575.1|WP_083051186.1|59972_60632_+|pyridoxamine-5'-phosphate-oxidase	gnl|CDD|235555	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase.	1.84706e-103
NZ_AP022575.1|WP_163662668.1|52778_53060_+|DUF2537-domain-containing-protein	gnl|CDD|378496	pfam10801, DUF2537, Protein of unknown function (DUF2537). This bacterial family of proteins has no known function.	2.24173e-16
NZ_AP022575.1|WP_083051184.1|58746_59901_-|citrate-synthase-2	gnl|CDD|237070	PRK12350, PRK12350, citrate synthase 2; Provisional.	0
NZ_AP022575.1|WP_083051172.1|51933_52782_+|RNA-methyltransferase	gnl|CDD|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	1.72977e-63
NZ_AP022575.1|WP_083051484.1|65836_75856_-|PPE-domain-containing-protein	gnl|CDD|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	5.77739e-79

Protein sequences

>NZ_AP022575.1|WP_083051186.1|59972_60632_+|pyridoxamine-5'-phosphate-oxidase
MAGPDDQYLTGMRVEYGSTEQDGSPDLDADWLADGWLALFRKWIDDAERAGLAEPNAFVLATVAAGRPVSRSVLCKSADETGITFFTNYDSAKGAELAATPYASATFPWYRLGRQVHIRGPVSRVDRQLTQQYWAQRPRGSQLGAWASHQSRPIASRAALLHQLAKVTARFADEAHIPVPPNWGGYRIAPEVVEFWQGRENRLHNRIRVIGDRIERLQP
>NZ_AP022575.1|WP_083051184.1|58746_59901_-|citrate-synthase-2
MTVVPENFVAGLEGVVAFTTEIAEPDKDGGALRYRGVDIEDLVRHRVTFGDVWGLLVDGKFGNGLPPAEPFPLPIHTGDVRVDVQAGLAMLAPIWGYAPLLDTDDATARDQLARASVMALSYVAQSARGIYQPAVPQRVIDECSTVTARFMTRWQGEPDPRHVEAIDAYWVSAAEHGMNASTFTARVIASTGADVAAALSGAIGAMSGPLHGGAPARVLPMLEEVERSGDARGLVKGILDRGEKLMGFGHRVYRAEDPRARVLRATAERLNAPRYEVAVALEQAALAELRERRPDRAIETNVEFWAAVILDFARVPAKMMPAMFTCGRTAGWCAHILEQKRLGKLVRPSAIYVGPGPRSPESVEGWDRVRLPARVCDANGGDGR
>NZ_AP022575.1|WP_083051192.1|58089_58548_-|VOC-family-protein
MTITVEPAVSPHLVVDDAAAAIDFYVKAFDAVELGRVPRPDGKLVHAAVKINGFLVMLNDDFPEICGGKSMTPKSLGGTPVTIHLTVTDVDAKFQRAVDAGATVVMPLEDQFWGDRYGVIADPFGHHWSLGQPVREVSMEEIQEAMSAQPGG
>NZ_AP022575.1|WP_083051182.1|56362_58093_+|FAD-dependent-oxidoreductase
MPHVITQSCCNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVNACPVGAIAPDNRLDVRQLPFVEINASYYAPPVAGVKPPPTSKLAPVLPAAAVHVGRQPLTVAIVGSGPAAMYAADELLVQPGVRVNVFEKLPTPYGLVRAGVAPDHPNTKRVTQLFDRVARDRRFRFFLNVEIGKHLRHAELLAHHHAVLYAVGAPNDRRLDIDGMGLPGTGTATALVAWINGHPDFAHLPVDLGHERVVIIGNGNVALDVARVLTADPDDLARTDIADHALRALRSSAVREVVIAARRGPAYSAFTLPELVGLTGACDVVLDAGDHRRVLDDRATVSDPLTRSKLDVLATLGSPGEGGPASAPGIGRRRIRLAYRLTPRRVLGQRRAGGVEFAVTGTDELRRIDAGLVLTSIGYRGRPIRDLPFDESAAVVPNDGGRVVDPDTGQPVSGAYVAGWIKRGPTGFIGTNKSCSLQTVQALVADFNAGKLTDPVAKPAALAKLVRARQPEVVDSLGWRAIDAAEVARGADDGRPRVKFTATADMLAAAASAQRASPPARRLLARLRDLAEPMVS
>NZ_AP022575.1|WP_083051179.1|55323_56346_+|diiron-oxygenase
MARTRMVRRWRRNMEVRDDLEYVEKLATLSEGSVRRNFNPYTDIDWGSPEFAVTDNDPRWILPAADPLGRHPWYQAQSPQRQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMMFQEMVNRVGADVPGMPRRLRWISPLVPLLAGPLPVAFFIGVLAGEEPIDHTQKQVLREGKALHPIMERVMAIHVAEEARHISFAHEYLRKRLPRLTRAQRFWISLYFPLTMRSLCNAIVVPPKEFWRQFDIPREVKKELFFRSPESRKWLRDMFADVRMLAYDTGLMNPIARLVWRMCKIHGKPSRYRSEPQRQLLASAPAA
>NZ_AP022575.1|WP_083051177.1|54014_55145_-|phosphoserine-transaminase
MADQLTPHLEIPANLKPRDGRFGSGPSKVRPEQLKALTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSVPAGYQVILGNGGATAFWDAAAFGLIDTRSLHLSYGEFSSKFASAVAKNPFIADPVVITADPGGAPQPQSDPAVDVIAWAHNETSTGVAVPVRRPEGSGDALVVIDATSAAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALARVEAIAAAGRWVPDFLSLPIAIENSLKNQTYNTPAIGTLALLAEQIDWLLGNGGLDWAVKRTADSSQRLYCWAQARPYTTPFVTDPGLRSQVVGTIDFTDDVDAAAVAATLRANGIVDTEPYRKLGRNQLRVAMFPAVDPDDVSALTECVDWVVERL
>NZ_AP022575.1|WP_083051175.1|53130_53895_-|DUF3071-domain-containing-protein
MRELKMVGLDADGTYLICEGANPAERFKLPVDERLRAALRGDALPPEQPQLAIDVTNMLSPKEIQARIRAGASVEQVAAASGSDIARIKRFAHPVLLERARAAELATAAHPLLADGPAVLTLLETVTSAFVTRGLRTDGLSWDAWRNEDSRWTVRLAWQAGRSDNVAHFRFTPGSHGGTVTAIDDAASELIDPDFKPPLRPLAPVAHLAFDAVQHPARPAPAAPSEPSASGRRGKPAVPAWEDVLLGVRTGGRG
>NZ_AP022575.1|WP_163662668.1|52778_53060_+|DUF2537-domain-containing-protein
MNHERGQSTPWATGLAVAGFVAAVIGVGVVVLSLGLIRVHPLLALGLNIVAAGGLAPTLWGWRRTPVLRWFVLGAGLGVAGAWLALLASTVLG
>NZ_AP022575.1|WP_083051172.1|51933_52782_+|RNA-methyltransferase
MSAPGRVPDVDVQDVNDPDDPRLDSFRDLNSVDRRPDLPTGKGLVIAEGVLVVRRMLASRFTPFALLGTDRRLVELGDDLAAARGVDAPYYRVSADVMARVVGFHLNRGVLAAARRVPEPRVAQVIAGARTVAVLEGVNDHENLGSIFRNAAGLGVDAVVFGSGCADPLYRRAVRVSMGHALLVPYARSRDWPADLRMLREHGFRLLAMTPRGDTCTLPEAMATVRDQRIALLVGAEGPGLTAAALRLSDLRVRIPMSRGIDSLNVATAAALAFYERVRLAR
>NZ_AP022575.1|WP_083051170.1|51505_51937_+|MarR-family-transcriptional-regulator
MPDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALTTLVNEGAMTPGALAIRERVRPPSMTRVIASLADMGFVVRVPHPVDGRQVLVSVSKSGAELVQAARRARQEWLAERLATLDSGQRDILRSAADLISALVDDSP
>NZ_AP022575.1|WP_083051484.1|65836_75856_-|PPE-domain-containing-protein
MDYTLLPPEINSARLFLGAGLEPLLNAAAGWQGLATELGSAAASFSSVTSGLADTAWRGAASAAMTRAAAPYLEWLSTATMRAEQAATQVRMTAAAFEAALAATVRPSVISANRSQFRSLVLSNLLGQNAPAIAAIEAQYEQMWAQDVAAMLGYHAAASAAVSELTPFASGLLADLQGQLVGAASAVGASLAHTAAAGAAPAAGPGAAQATVLRVAGFNLGFANIGFPNVGNANIGDYNVGSANIGSNNIGFGNTGNGNIGFGNTGSHNIGFGNTGSGNFGLGNFGFGNTGFANSGDNNLGIGLTGSNLAGFGLAGGLNSGTGNVGLFNSGTGNIGIGNSGTGNFGIGNTGSLNTGIGNSGSVNTGFFNSGIANTGVGNSGNYNTGSFNPGTGNTGGFNAGDHNTGYFNTGNHNTGFANSGDVNTGAFIYGNYSNGFLWRGNYQGLFFGGPGFGNSTTVPSSGFFNTGAGSASGFFNTGANNSGFFNTSLGATGNSGFANVGVLVSGLVNSGNTMSGLINLSMVNVTTPANVSGVFNAGRNVSGAFLRINLLNVGLANQGVGNILGNANLGNYNIFANANLGDYNIFGSGNFGSYNLFGDGNIGSHNVGGGNIGDANFGLGNLGSHNFGFGNAGSGNIGFGNAGSGNIGFGNTGNGNVGFGNTGNNNVGIGFTGSNLVGFGGLNSGSGNIGLLNSGTNNVGLFNAGTGNVGIANSGTGNRGLLNAGIGNWGVENPGTGNTGVGNAGHYNTGFYNAGGVNTGLYNTGSYNTGSFNVGSTNTGGFNPGNTNTGHFNTGNINTGFFNTGDVNTGAFNTGNFNNGFFMLGDNQGQIAIDLSVTIPYMPINMQMIIPVNMAIPLGGMPIPLTVAGTVFPRIDYLGGLFFFGPVVLGASTITVPPIVLTIGGPDVAIPLSIVGALEGGTITLLNIPAGPGFGNSTTSPSSGFFNSGAGGTSGFQNFGGSSSGIWNGGVGNVIGNSGFLNFGSLQSGWANLGSSVSGFSNTGLAGLVAPANVSGLFNTGSNLVGLFHDQVGGMSAFSLGLGNLGQLNLGSGNSGNFNLGSGNIGSFNLGSGNFGNANVGFGDLGNNNFGFGNTGNGNIGFGNTGSGNIGFGNTGDGNIGFGNTGNNNVGIGFIGSNLVGFGGWNSGSGNIGLFNSGTDNVGVGNSGTGNLGVGNTGSGNAGLGNTGGANTGFFNSGDVNTGFFNSGSVNTGIGNAGDYNTGSFNAGNFNTGGLNPGSYNTGYLNTGTYNTGLANSGDINTGFFISGNYSNGLLWKGDYQGLWGAHYTIHVPEIPAHVEVSVPINIPITANVTETLFSGITLRSVNFGFGVPLGPVPLAHGVIDSVTVPPIRAFGPSISFNIGDPEGSTVVRVPVTASIGPVDWTLVHIPTATGFFNSTTSPSSGFFNGGGGTVSGIANIGANISGIQNLADFGTSGFRNHGALQSGLANLGNTVSGLFNTGIATPANVSGMSNIGGNLAGFFHSQVAGTSTFNVGLGNVGAYNLGFGNLGDYNVGWADLGNANVGFGNTGSGNVGFGNNGSHNVGFGNTGSGNIGFGNTGSGNIGFGNTGNSNVGIGLTGSGQLGFGALNSGSGNIGLFNSGTGNVGIGNSGTGNLGVGNTGSRNTGMGNTGSTNTGFFNSGSVNTGIGNAGNDNTGSFNVGSFNTGGLNPGSYNTGYLNTGNYNTGLANSGNVDTGAFISGNYSNGLLWTGDHQGLWGYSSTGTIPDTAIPMHLHVPIYLDIPISGTLGTVTVESFTIPAVTVHATFFDNIPSRILDTRPITISSITIALPAIGVHIGAGPGPLIDIVGAGDLLPVKLPPIDIPARPGFGNTTGTPSSGFFNSGTGTVSGVGNVGGNISGFFNLSSGTSGMSGYQNVGELVSGVSNFGNTISGFFNPGTNTGSNLAGLLLANPLANVGVANIGGDNIGSGNVGAFNFGYGNVGTANLGSGNIGSHHFGFGNAGSGNIGPGNFGNDNLGLGNLGNHNFGFGNAGSNNLGFANTGSNNIGIGLTGDNNIGIGLTGSGQIGFGALNSGSGNVGLFNSGSGNVGLFNAGSGNVGLFNAGTANWGIGNPGIGNVGIGNSGTGNWGLWNPGTGNTGIANAGNYNTGIANAGSTNTGIANPGNYNTGSFNTGSTNTGNYNTGNYNTGSFNTGDYNTGLANSGNVNTGAFNAGNYSNGVFWRGDFQGLWGAHVEINIPEFPLVNMDLNVPINIPIHLDLDSFALENGLTISPIVINGAGIVDYTIGPIIIPPITGTLPVIDVTVGGPTTSLPIAIRSGVGPIRIVLLDIPPAPGFGNSSSTPSSGFFNSGAGSASGFGNVGGNNSGFWNSASASMGNSGFQNFGSLQSGWANLGNVVSGFHNTGTANLTVAANLSGWSTTGTDLAGLFRGPTGTTMVNLGLADLGRWNVGSGNFGDFNVGSGNVGAYNFGLGNQGAANFGFGDVGSNNLGFGNLGSSNIGFGNTGSHNIGFGNTGSGNFGIGLTGSGNIGIGLSGTGQVGVGALNSGTGNIGLFNSGTGNIGIGNSGSGNFGIGNSGTGNTGIGNAGAYNTGLYNTGHYNTGIANPGDYNTGLYNTGHYNTGIANPGDYNTGLYNTGHYNTGIANSGDFDTGGFISGDMNNGFFWRADRQGLLAANYTVTVDSVSAFLTVDVPVNIPIVGTITDISIPAITIPVINARGDLDLGIFGGTITAPMGPIHIHGGDDSAPLNTPIVINFGPQPAININIGNPDGSTVIHILATGGLGPIHIPLINLEPQPGFFNATIGPSSGFLNWGAGSASGWQNFGNNSGFYNVATAAMGNSGFQNYGSLQSGWANLGSTVSGLFNTGLGTPSPVSGFNNVGADLAGWLQHGPSATFNLGLANLGLGNLGSGNIGSHNFGLGNLGTYNLGSGNIGSHNLGSGNIGSVNIGFGNSGPALTAAVQNLGFGNTGSFNIGFGNTGNANIGLGNTGNGNIGIGLSGDMQVGIGGFNTGSGNFGLFNSGTDNIGFFNSGTGNWGIGNSGSYNTGIGNTGSTNTGFFNTGLVNTGIGNAGNYNTGLYNVGNTNTGSFNPGSFNTGGFNTGGYNTGYFNTGNANTGIGNSGNVDTGFFISGNYSNGAFWRGDYQGLGGFAYQITIPDIPWSYTVDSNIEIPIRGAINAVTQEMFTVEEFDIPISLITRICDPFTGECVTVTTPIITQHIGPFTVDLSVLNPETPIDMVFSLPIEPGTGSVGPFTIGFGWQQTPGFFNSTSSPSSGFFNSGAGGASGFFNNVAGAVSGFGNAVTQNSGFFNVAGQGNSGFQNFGNLQSGWANAGNVLSGFYNASTLGLLQGYISGFGNIGTKLSGFLNIGVGS
>NZ_AP022575.1|WP_083051482.1|76493_77789_+|citrate-synthase
MADTDDTATLRYPGGELDLQIVRASEGNDGIALGPLLAKTGYTTFDVGFVNTASTKSAITYIDGDAGILRYRGYPIEQLAEKSTFIEVSYLLIYGELPNTEQLAEFTHRIQRHTMLHEDLKRFFDGFPRNAHPMPVLSSVVNALSAYYQDALDPMDNGQVELSTIRLLAKLPTIAAYAYKKSVGQPFLYPDNSLTLVENFLRMTFGLPAEPYQPDPEVVRALDMLFILHADHEQNCSTSTVRLVGSSRANLFTSISGGINALWGPLHGGANQAVLEMLENIRQSGDDVGEFVRKVKNREAGVKLMGFGHRVYKNYDPRARIVKEQADKILAKLGGDDDLLNIAKGLEEAALTDDYFIERKLYPNVDFYTGLIYRALGFPTRMFTVLFALGRLPGWIAHWREMHDEGDSKIGRPRQIYTGYTERAYLSIDAR
>NZ_AP022575.1|WP_163662671.1|77845_79438_-|NAD(P)-binding-protein
MAVDGPREFDAVVVGGGHNGLVAAAYLARAGLAVRVLERLGHVGGAAVSAQAFDGVEVRVSRYAYLVSLLPSRIVDDLGATVRLARRRFSSYTPDPATAGRSGLLIGRHGTFAAIGDDGDHRGFAAFYRRCRLVTEHLWPTLMQPLPTRAQAHRKVLDRGDPEAAAAWHALVDEPIGHAITEAVRSDLVRGVIATDALIGTFARLGDPSLAPNVCLLYHVLGGGTGDWDVPVGGMGALTSALATAAVRHGAEITTGADVFAVNPDGEVRYRSRGGEHLIRGRFVLAGVTPTVLAGLLGEPEPPLAPGAQVKVNMVVRRLPRLRDDRVTPDQAFAGTFHVNETWCQLDAAYSRAAGRRLPDPLPCEAYCHSLTDPSVLSPGLRAAGAHTLTVFGLHTPHSVFGAVDPDTLRHRLTESVLASLNSVLAEPIQQVLMADAHGRPCVETATTADLQHTLQMTAGNIFHGALCWPFADDDDPLDTPARQWGVATEHERIMLCGSGARRGGAVSGIGGHNAAMAVLASLASRRKSP
>NZ_AP022575.1|WP_083050189.1|79440_79617_-|DUF2630-family-protein
MAARATSTDTDTRARRPIEIDPDRCCDLLRLRRSPRETGGDPPVATVRPVDQIEGYTG
>NZ_AP022575.1|WP_083050192.1|79733_80753_+|OmpA-family-protein
MAGSKVGVGEPAAPTDARRTPRFRRRPLGRSWWIGLLVIPLLIAAIGYGAFERPRSVTGPTGDLPTLATASATPSVAGPSLSLLSISRSGNTITLIGDFPDDAAKAALIKALQGLLTPGVNVIDQIRIDPLARALDFSNAEPVFTAGVPIPDFGLKVERDTITLTGTAGSPDQKDAVERAVANAWDGVNVANKIEVKGQAPATGTAGPTPPPPGTAAPGPCADLQSAINAVTGGPIAFAGDGVSLTPADEQILARVADKLKACPEARVTINGYTDNSGSEFLNIPLSAQRASTVADFLIAHGVARDRVAAKGLGSMNPIASNDTPEGRAKNRRAEIVVG
>NZ_AP022575.1|WP_169715463.1|80766_80907_+|hypothetical-protein
MGFVIQWLCYLVAFLAGSAVAWVVGVSITRSGDDEPVAAPPEAGRP
>NZ_AP022575.1|WP_083050195.1|80906_81473_+|hypothetical-protein
MDQVHWWLAALAFGLGMVLTLVLMVQPANEQVPVGTSRTRTGGSGAQPHRPTAKKPAPAHKATAPRTNKKAVTKDSPPKKAPARNQLSTTTIADAKESARERISVAKASPTMQARTLPFAPYGRGSARAGPDGGGPAGWLVKGRSDTRLYYTPDDPAYDSIVAQVWFRDEAAAARAFFTPWAKSARRK
>NZ_AP022575.1|WP_083050197.1|81495_82836_-|two-component-system-sensor-histidine-kinase-PrrB
MNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGFAIPFVPRGLDEIPRSPNDRDALITVRSGNVIKSNSDITLPRLQADYADTYIRGVRYRVRTVEIPGPEPTSVAVGATYDTTIAETNNLHRRVLLICAFAIGAAAVFAWLLAAFAVRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEAMRGMLQRIWNEQNRTKEALASARDFAAVSSHELRTPLTAMRTNLEVLSTLDLPEDQRKEVLNDVIRTQSRIEATLSALERLAQGELSTSEDHVPVDITELLDRAAHDAMRIYPDLDVSLVPSPTCIIVGLPAGLRLAVDNAIANAVKHGGATRVQLSAVSSRAGVEIAIDDNGSGVPEDERTVVFERFSRGSTASHSGSGLGLALVAQQAQLHGGTASLDSSPLGGARLLLKLPGPS
>NZ_AP022575.1|WP_142272122.1|82847_83558_-|two-component-system-response-regulator-PrrA
MSDMDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVRALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAHGGPRLLHTVRGVGFVLRMQ
>NZ_AP022575.1|WP_083050199.1|83622_84885_-|MFS-transporter
MPFQEIPPPRYCGRDRAALQTVNFFMADMEAGMGPFLGVLLASRGWTTGAIGAVITLGAIVGMVAVGPAGALVDATHRKRACVIVVGLAAVAASAVILTSRQFWVVAGAQAVMCISGATIAPAVIGITLGVVGQAGFTAQNGRNQAYNHAGNMVGAAASGLLGWLFGYGGVFWLAVGFAVVTIVAVLAIPGARIDHHVARGEPPAGEVPVSAMRVLLRSRPLLALAAALVLFHLGNAAILPFYGLAVVATHANPFATVASTVVVAQAVMIVAALVAMRIAQTRGYWLAILIAFTVLPVRGLLAAAVITTWGVIPVQVLDGIGAGMLSVAVPGLVARILDGTGHINVGQGAIMAAQGLGGALSPLLGGVVAQHLGFPVAFAMLGAVSLGSLIIWLGLASLLRPPARAVAKRQDVHDSEAIV

Crispr_ID: NZ_AP022575_3

• CRISPR_ID: NZ_AP022575_3
• CRISPR_location: 318672-318816
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_AP022575_3

Consensus_repeat	Method
GGCGGCGCCGGCGGCAAGGGCGGC	CRISPRCasFinder

spacers of NZ_AP022575_3

>3.1|318696|51|NZ_AP022575|CRISPRCasFinder
GCCGGCGGCAAAGGTGCCGAGGGTGTTTCGAGCGGTTCGGCCGGGGGCGTG
>3.2|318771|21|NZ_AP022575|CRISPRCasFinder
CACGCGCTGCTGTGGGGCGCC

CRISPR arrays and Neighbor proteins around NZ_AP022575_3

CRISPR arrays

The CRISPR arrays of NZ_AP022575_3

>merge|NZ_AP022575|3|318672-318816|CRISPRCasFinder
GCCGGGGCCGGTGGCAACGGCGGCGCCGGCGGCAAAGGTGCCGAGGGTGTTTCGAGCGGTTCGGCCGGGGGCGTGGGCGGGGACGGTGGGGCCGGCGGCCACGCGCTGCTGTGGGGCGCCGGCGGCCCGGGCGGCGCCGGCGGGG

>NZ_AP022575|3|1|318672-318816|CRISPRCasFinder
GCCGGGGCCGGTGGCAACGGCGGC	GCCGGCGGCAAAGGTGCCGAGGGTGTTTCGAGCGGTTCGGCCGGGGGCGTG
GGCGGGGACGGTGGGGCCGGCGGC	CACGCGCTGCTGTGGGGCGCC
GGCGGCCCGGGCGGCGCCGGCGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083051357.1|330282_331584_+|PhoH-family-protein	unknown	unknown	gnl|CDD|224787
NZ_AP022575.1|WP_083052598.1|321094_322186_+|hydroxyneurosporene-methyltransferase	unknown	unknown	gnl|CDD|366359
NZ_AP022575.1|WP_083051354.1|331610_332486_+|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|213022
NZ_AP022575.1|WP_083051348.1|333741_335163_-|class-II-fumarate-hydratase	unknown	unknown	gnl|CDD|234779
NZ_AP022575.1|WP_083052429.1|317113_317569_+|glycosyl-hydrolase-family-12	unknown	unknown	gnl|CDD|366751
NZ_AP022575.1|WP_083052390.1|309430_309925_-|transcription-elongation-factor-GreA	unknown	unknown	gnl|CDD|234693
NZ_AP022575.1|WP_083052596.1|322300_322714_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083052396.1|310674_311547_+|mycothiol-conjugate-amidase-Mca	unknown	unknown	gnl|CDD|132487
NZ_AP022575.1|WP_083051360.1|329247_330075_+|acyl-ACP-desaturase	unknown	unknown	gnl|CDD|153109
NZ_AP022575.1|WP_083052400.1|311543_311810_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_163662704.1|325562_326717_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_163662707.1|332549_333503_-|hypothetical-protein	unknown	unknown	gnl|CDD|372351
NZ_AP022575.1|WP_163662701.1|307444_308152_+|RDD-family-protein	unknown	unknown	gnl|CDD|377640
NZ_AP022575.1|WP_083052423.1|314782_315571_+|isoprenyl-transferase	unknown	unknown	gnl|CDD|237825
NZ_AP022575.1|WP_083052393.1|310152_310587_-|DUF4307-domain-containing-protein	unknown	unknown	gnl|CDD|379491
NZ_AP022575.1|WP_083052420.1|313894_314635_-|hemolysin-III-family-protein	unknown	unknown	gnl|CDD|273425
NZ_AP022575.1|WP_083051365.1|326756_327695_-|type-I-pantothenate-kinase	unknown	unknown	gnl|CDD|235466
NZ_AP022575.1|WP_083052403.1|311796_313836_+|thioredoxin-domain-containing-protein	unknown	unknown	gnl|CDD|224250
NZ_AP022575.1|WP_083051363.1|327833_329114_+|serine-hydroxymethyltransferase	unknown	unknown	gnl|CDD|234571
NZ_AP022575.1|WP_083052387.1|308193_309378_+|cystathionine-gamma-synthase	unknown	unknown	gnl|CDD|236104

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083051357.1|330282_331584_+|PhoH-family-protein	gnl|CDD|224787	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only].	0
NZ_AP022575.1|WP_083052598.1|321094_322186_+|hydroxyneurosporene-methyltransferase	gnl|CDD|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	4.12641e-47
NZ_AP022575.1|WP_083051348.1|333741_335163_-|class-II-fumarate-hydratase	gnl|CDD|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
NZ_AP022575.1|WP_083052429.1|317113_317569_+|glycosyl-hydrolase-family-12	gnl|CDD|366751	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12.	2.33258e-34
NZ_AP022575.1|WP_083052390.1|309430_309925_-|transcription-elongation-factor-GreA	gnl|CDD|234693	PRK00226, greA, transcription elongation factor GreA; Reviewed.	5.09898e-67
NZ_AP022575.1|WP_083052396.1|310674_311547_+|mycothiol-conjugate-amidase-Mca	gnl|CDD|132487	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca. Mycobacterium tuberculosis, Corynebacterium glutamicum, and related species use the thiol mycothiol in place of glutathione. This enzyme, homologous to the (dispensible) MshB enzyme of mycothiol biosynthesis, is described as an amidase that acts on conjugates to mycothiol. It is a detoxification enzyme. [Cellular processes, Detoxification].	0
NZ_AP022575.1|WP_083051360.1|329247_330075_+|acyl-ACP-desaturase	gnl|CDD|153109	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain. Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 10 to yield oleic acid in the ACP-bound form. The enzymatic reaction requires molecular oxygen, NAD(P)H, NAD(P)H ferredoxin oxido-reductase and ferredoxin. The enzyme is active in the homodimeric form; the monomer consists mainly of alpha-helices with the catalytic diiron center buried within a four-helix bundle. Integral membrane fatty acid desaturases that introduce double bonds into fatty acid chains, acyl-CoA desaturases of animals, yeasts, and fungi, and acyl-lipid desaturases of cyanobacteria and higher plants, are distinct from soluble acyl-ACP desaturases, lack diiron centers, and are not included in this CD.	1.00821e-45
NZ_AP022575.1|WP_083051354.1|331610_332486_+|polysaccharide-deacetylase-family-protein	gnl|CDD|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	1.94963e-69
NZ_AP022575.1|WP_163662707.1|332549_333503_-|hypothetical-protein	gnl|CDD|372351	pfam12868, DUF3824, Domain of unknwon function (DUF3824). This is a repeating domain found in fungal proteins. It is proline-rich, and the function is not known.	0.0012628
NZ_AP022575.1|WP_163662701.1|307444_308152_+|RDD-family-protein	gnl|CDD|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	5.22599e-22
NZ_AP022575.1|WP_083052423.1|314782_315571_+|isoprenyl-transferase	gnl|CDD|237825	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional.	5.84623e-123
NZ_AP022575.1|WP_083052393.1|310152_310587_-|DUF4307-domain-containing-protein	gnl|CDD|379491	pfam14155, DUF4307, Domain of unknown function (DUF4307). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 132 and 153 amino acids in length. There is a single completely conserved residue C that may be functionally important.	8.8428e-33
NZ_AP022575.1|WP_083052420.1|313894_314635_-|hemolysin-III-family-protein	gnl|CDD|273425	TIGR01065, Hypothetical_UPF0073_protein_yqfA., channel protein, hemolysin III family. This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.	6.93462e-71
NZ_AP022575.1|WP_083051365.1|326756_327695_-|type-I-pantothenate-kinase	gnl|CDD|235466	PRK05439, PRK05439, pantothenate kinase; Provisional.	0
NZ_AP022575.1|WP_083052403.1|311796_313836_+|thioredoxin-domain-containing-protein	gnl|CDD|224250	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones].	0
NZ_AP022575.1|WP_083051363.1|327833_329114_+|serine-hydroxymethyltransferase	gnl|CDD|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_AP022575.1|WP_083052387.1|308193_309378_+|cystathionine-gamma-synthase	gnl|CDD|236104	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional.	0

Protein sequences

>NZ_AP022575.1|WP_083052429.1|317113_317569_+|glycosyl-hydrolase-family-12
MGTTLPLRLGQIQSATTSIDYAYPSIGIWNASYDIWLDSTPKTTGVNQQEIMIWINHQGPIQPVGSPVGNATVGGRTVVVWDGSNGQNNVMSCVAASPMEVWSFDVMDFVDHTATMEPITDSWYLTSIQAGFEPWSGGVGLGVDSFPANID
>NZ_AP022575.1|WP_083052423.1|314782_315571_+|isoprenyl-transferase
MEIIPARLKQPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSFGYRMGAAKIAEMLRWCQEAGIEMTTVYLLSTENLRRDPDELAALIEIITDVVEEICAPANRWSVRTVGDLELLGEEPARRLRGAVESTPEVASFHVNVAVAYGGRREIVDAVRALLSKELANGATAEELIDAVTIEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRHVDFLRALRDYSLRHRRYGG
>NZ_AP022575.1|WP_083052420.1|313894_314635_-|hemolysin-III-family-protein
MTSQASTVTKPEPESHGHTPSDAAHQLVEGVARVLTKPRFRGWIHVYSAGAAVFAGASLVAVSWALGSTKAGLATLAYTAATILMFTVSATYHRVNWRSQTAHKWMKRADHSMIFVFIAGSYTPFALLALPGHDGHVVLSIVWGGALAGTLLKMCWPSAPPWVGVPLYLLLGWVAVWYTAAILHNAGVTAMVLLFVGGALYSIGGILYALRWPDPWPTTFGFHEFFHACTAVAAICHYIAMWFVVF
>NZ_AP022575.1|WP_083052403.1|311796_313836_+|thioredoxin-domain-containing-protein
MSPPDPSGTNTLAQATSPYLRQHADNPVHWQQWTPQALAAAATRDVPILLSVGYAACHWCHVMAHESFEDHEVAAAMNAGFVCIKVDREERPDIDAVYMNATVALTGQGGWPMTCFLTPDGRPFFCGTYYPKEAFLQLLSAVSAAWRQRRGEVEQAAGHIAGELRSMASALPGPPGSGPDVAPELCDHAVAAVLREQDAAHGGFGIAPKFPPSALLEALLRHYERTGSAAALQAVSRTGDAMARGGIYDQLAGGFARYSVDSAWVVPHFEKMLYDNALLLRAYAHWARRTGDRLARRVATQTARFLLSELGSKVPAAVFTSSLDADADGREGSTYVWTPAQLTEVLGVDDGRWAAEVFGVTESGTFEHGTSVLRLPSDPDDPQRLERIRAELLAARLARVQPERDDKVVTSWNGLAITALAEASVALGDPELAHAARRCATTLLGMHVVDGRLRRASLGGVVGDGAAVLEDYAMLATGLLTLYQLTSDAAWLTAATELLDSALAHFGDPQRPGRWFDTADDAEQLVLRPSDPLDGATPSGASAIAEALLTAAQLVDGGRADRYLRAAADTLRAHAVLLARAPRSAGHWLSVAEAAVRGPLQIAVACDPSRSALLADARRLAPGGAIVVGGAMDSSALLTGRDRVGGADAAYVCRGRVCDLPVTTTSELTAALGADGRRK
>NZ_AP022575.1|WP_083052400.1|311543_311810_+|hypothetical-protein
MNPFLLTVIADGAPGNPGPEFGKASPLGLLVVVLLVIATLFLLRSMNRQLKKVPKSFDRDNPELDQAADEGTDRDGSARPPEPPDEPA
>NZ_AP022575.1|WP_083052396.1|310674_311547_+|mycothiol-conjugate-amidase-Mca
MSELRLMAVHAHPDDESSKGAATLARYADEGHRVLVVTLTGGERGEILNPAMDLPDVHRHIAEIRRDEMAKAAEILGVEHTWLGFVDSGLPQGDPPPPLPEGCFAMVPLEEATEALVRVVREFRPHVMTTYDENGGYPHPDHIRCHQVSVAAFEAAGDYRRFPDAGAPWTVSKLYYIHGFLRERVQMLQDEFVRRGQEGPFGKWLEHWHPDHDPYANRVTTRVECSAYFAQRDDALRAHATQIDPNAEFFAAPLSWQQELWPTEEFELARSRVPAHLPETELFAGIEPDR
>NZ_AP022575.1|WP_083052393.1|310152_310587_-|DUF4307-domain-containing-protein
MSPAPVSRPEARYGHERLSRPARRRLAIVLGVLVVAAGLAVAVNGYQRIATSAVTGTLTGYRLIDDETASVTIGVTRSDPSRPVACIVRARAADGSEAGRREVLVVPANQHTVAVTTTVKASKPPAMADVYGCGTAVPAYLRPP
>NZ_AP022575.1|WP_083052390.1|309430_309925_-|transcription-elongation-factor-GreA
MADTHVTWLTQESHDRLKAELDQLIANRPIIAAEINDRREEGDLRENGGYHAAREEQGHQEARIRQLQDLLNNAKVGEAPEQSGVALPGSVVTVYYNGDESDSETFLIATRQEAVSDGKLEVYSPNSPLGRALIDAKVGETRSYTVPNGSTVSVTLVSAEPYRP
>NZ_AP022575.1|WP_083052387.1|308193_309378_+|cystathionine-gamma-synthase
MSEDAARRHPFTGLATTAIHAGSRPDPATGAVNTPIYASSTFAQDGVGGLRGGFEYARTGNPTRAALEAALAAVEAGTFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTHWGVDYTPVALADLDAVRAAITARTRLIWVETPTNPLLSIADIAAIAALAADSSVKVLVDNTFASPALQQPLTLGADVVLHSTTKYIGGHSDVVGGALVTNDEALDRAFAFLQNGTGAVPGPFDAYLTLRGLKTLVLRMQRHSENAAAVAEFLAGHPAVSAVLYPGLPAHRGHEIAARQMRGFGGMVSLRMRAGRQAAMDLCANTKVFILAESLGGVESLIEHPGTMTHASTVGSRLEVPDDLVRLSVGIEDVADLLGDIEQALAQLGEQT
>NZ_AP022575.1|WP_163662701.1|307444_308152_+|RDD-family-protein
MSDQPPGGSYPPPPPPPSEGNEPPSGSYPPPPGGSYPPPPSGSYPPPPPPPPGGSYPPAPPSAGGYAPPPPGPAIRDMPTESYTPWFTRVLAALIDLAPYLVIIGIGWVIMLVTQTSSCVTNVGQYEVGQYCVSGPSMIGQLAQWLLYLVGLAYLVWDYGYRQGTTGSSIGKSVMKFKVVSETTGQPLGFGMSVVRQLAHVVDAIICYIGFLFPLWDRKRQTLADKIMTTVCLPI
>NZ_AP022575.1|WP_083052598.1|321094_322186_+|hydroxyneurosporene-methyltransferase
MGASRVPPAGVVRVIERARHHLIGLHRRLVPAPVALIEMILDAWAAQAITAAADLGIADALAHGPLSAEELAAAVDADADALARLLRALIGRGIFRQRHDGRYELTPLADALRSDADVSLAGMARWVGAPQHREHWSRLTHAVRSGRSVVPELRGKPAFDYLAAEPELAEIFNQAMTGTTELSIAPVVAAYDFSPCATVVDVGGGHGRLLAAILDATPHARGILFDQTHVVAGAPALLAEHQVVDRVRIEEGSFFDDAIPRGGDTYVLKNIIHDWPDDDAARILGNVRAAAGAGSKALLIEQVIPPHHRDFTGKWLDLEMLVALGARERTAAEYQRLLQRAGFGGMRVIGTASPYSVIEATAI
>NZ_AP022575.1|WP_083052596.1|322300_322714_+|hypothetical-protein
MTAVFGPLTRPLYDSTDSLLRFAMRADATLTGLIGLAVAVAAHPVSGLTGPTAGQEYGVGTFFVLYGLVVFGLAALPNVRRAGSGVVAANMVYTLAAVVAAELVPMTTTGIAATLASGGYTAGFAGLQYLGVRRLPA
>NZ_AP022575.1|WP_163662704.1|325562_326717_+|hypothetical-protein
MFGDAGAGGDGGAGGIGILAALGGKGGHGGAGGSAGLWGAGGAGGAGGIGGAGGNGFLSGLTGVSGGDGGAGGSGGAGGAGGLLFGDGGLGGHGAAGGGGGLGASSITPSIGPGAAGGAGGDGGAGGAGGAGGNARLWGIGGAGGAGGVGGNAGHAGNGANGGTQGLINPAQGGPGGNGGNGGIGGVGGAGGNGGHGGLLYGAAGGGGHGADGGNAGNGGTGGSATGSSTVQGKGGNGGSGGAGGVGGTGGGSASGGAAWGVGTGGAGGHGGSGGDGGVRGTGPGGNGVNGNGGAGADGGEGGPGGFLYGNGGAGGDAGAGGASGGTGATAGAGGKGGDGGNAQLIGDGGHGGAGGKGTPNGPGGAGGAKGQLSGQPGAAGASP
>NZ_AP022575.1|WP_083051365.1|326756_327695_-|type-I-pantothenate-kinase
MTRVSEPSPYIEFDRKQWRALRMSTPLALTEEELIGLRGLGEQIDLLEVEEVYLPLARLIHLQVAARQRLFAATAEFLGEPQQNPDRPVPFIIGVAGSVAVGKSTTARVLQALLARWDHHPRVDLVTTDGFLYPNAELERRNLMHRKGFPESYNRRALMRFVTSVKSGSDYACAPVYSHLRYDIIPGAKHVVRHPDILILEGLNVLQTGPTLMVSDLFDFSLYVDARIEDIEQWYVSRFLAMRTTAFANPESHFHHYAALSDSQAVIAAKEIWRSINRPNLVENILPTRPRATLVLRKDADHSINRLRLRKL
>NZ_AP022575.1|WP_083051363.1|327833_329114_+|serine-hydroxymethyltransferase
MSAPLADIDPDIAELLAKELGRQRDTLEMIASENFAPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDMVENIARDRAKALFGAEFANVQPHSGATANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYQTGFYGVDPTTHVIDMDAVRVKALEFRPKVIIAGWSAYPRILDFPAFRSIADEVGATLLVDMAHFAGLVAARLHPSPVPHADVVSTTVHKTLGGGRSGLIVGKQEYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFAERQRRTLSGARIIADRLLAADVANAGVSVVSGGTDVHLVLVDLRNSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDAEFTEVADIIATALAAGSSADIAGLRQRATRLAREFPLYEGLEEWSLVGR
>NZ_AP022575.1|WP_083051360.1|329247_330075_+|acyl-ACP-desaturase
MAQKPVANALTLELEPVVEENMARHLATEDIWFAHDYVPFDRGENFAFLGGRDWDPSQATLPRAITDACEILLILKDNLAGYHRELVEHFILEDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPTANEDVRVQHVMKGYRADRYTQVETLVQMAFTERCYAVFCRNLAAKLEEPILAGLIDRIARDEARHEEFFANLVTHLLGHVRDETIAAIAARAGDLQVLGADIDAYQDKLENVADAGIFGPTQLRQVICDRITAWGLAGEPQLTRFVTG
>NZ_AP022575.1|WP_083051357.1|330282_331584_+|PhoH-family-protein
MTDIRTYVLDTSVLLSDPWACGRFAEHEVVVPLVVISELEAKRHHHELGWFARQALRLFDDLRLEHGRLDQPIPVGTQGGSLRVELNHTDPAVLPAGFRTDSNDSRILSCAANLAAEGKRVTLVSKDIPLRVKAAAVGLAADEYHAQDVIASGWSGMHEIETAAADIDALFADGEIDLAEARDLPCHTGIRLLGGGSHALGRVTPAKRVQLVRGDREVFGLRGRSAEQRVALDLLLDESIGIVSLGGKAGTGKSALALCAGLEAVLERRTQRKVVVFRPLYAVGGQDLGYLPGSESDKMGPWAQAVFDTLEGLASPAVLEEVLSRGMLEVLPLTHIRGRSLHDSFVIVDEAQSLERNVLLTVLSRLGAGSRVVLTHDIAQRDNLRVGRHDGVAAVIEKLKGHPLFAHITLLRSERSPIAALVTEMLEEIAGPR
>NZ_AP022575.1|WP_083051354.1|331610_332486_+|polysaccharide-deacetylase-family-protein
MPKRPDNLAWRYWRTVVGVVAAAVVLLVGGLTGHITRADDPNCSVVKCVALTFDDGPGPYTDRLLKILADNDAKATFFLIGNKVAANPAGAQRIAEAGMEIGSHTWEHPNMTTIPPADIPGQFSRANDAITAATGRTPSLYRPAGGLSNDAVRQAAASFGQAEILWDVIPFDWINDSNTAATRQLLMAQVKPGSVVLFHDTYSSTVDLVYQFMPVLKANGYRLVTVSELLGPRAPGSSYGRRENGPAVNELHDIPASEIPPLPNTPSPTPMPNFPITDIPGQNSGGPNNGA
>NZ_AP022575.1|WP_163662707.1|332549_333503_-|hypothetical-protein
MTAPPGGPHGNHPYGADPYGQQPYWGDQTQGGGYGPGGPYPPGGPYPPGGYPPQQPPPPGQQYAPGWPAGPYPPAPPPRGPGSTLPWLILAGVAVLGVIVLVVILVVAVGNWGKSPTATPSSPAVTSAAPTSQPNASPQTATDCTPNVSGGDRPDGDTVSAGKLSFPTSAAPGWSPFSDDQNPNLIDAVGLGQEVPGANQWMMQVEVAVTNFVTSMDVSAQASTLLRCVANGPGYVQSSPTLGPMKTSSTTVDGVKAARVDADITIADTSRGVQGDTVTIIAVDTKPVTIFLGATPIGDAASAATVNRVIAALKVRR
>NZ_AP022575.1|WP_083051348.1|333741_335163_-|class-II-fumarate-hydratase
MAADAGDNDIDYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRGLERAQIRALGLLKGACAEVNKDLGLLAPDKADAIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNANEVIASIAAAGGVTVHPNDDVNMSQSSNDTFPTATHVAATEAAVRHLIPALQVLHTALSAKALEWQTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAPEGFGTKVVAVLVTQTGLSELRTAANAFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFRLLTNVSKLFAQRCIAGLTANVEHLRQLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLIGDKLSIEELDRRLDVLAMAKVEPVDT

Crispr_ID: NZ_AP022575_4

• CRISPR_ID: NZ_AP022575_4
• CRISPR_location: 318879-319379
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 9 spacers

Consensus repeat of NZ_AP022575_4

Consensus_repeat	Method
GGCGGCGCCGGCGGCAAGGGCGGC	CRISPRCasFinder

spacers of NZ_AP022575_4

>4.1|318903|33|NZ_AP022575|CRISPRCasFinder
GCCGGGGGCACCGGCGGGTTGTTGTTCGGTGAC
>4.2|318960|54|NZ_AP022575|CRISPRCasFinder
GTCGGCGGCGCCGGCGGCAACGGCGGCAACACCACCGGCTTTCCCAGCTCCATC
>4.3|319038|21|NZ_AP022575|CRISPRCasFinder
AACGGCGGGGCCGGCGGCACC
>4.4|319083|21|NZ_AP022575|CRISPRCasFinder
CTGTGGGGCGTCGGCGGCACC
>4.5|319128|50|NZ_AP022575|CRISPRCasFinder
GTCGGCGGCGCCGGCGGCAAGGGCGGCCCCGGCCTGGGCGGCAACAACAG
>4.6|319202|21|NZ_AP022575|CRISPRCasFinder
CGTGGCGGCACGGGCGGCGCC
>4.7|319247|15|NZ_AP022575|CRISPRCasFinder
CTGCTGGTGGGCACC
>4.8|319286|28|NZ_AP022575|CRISPRCasFinder
CGGCGCCGCCGTCAAGGGCGGTGACGGC
>4.9|319338|18|NZ_AP022575|CRISPRCasFinder
GCCGGCGCCGGCGGCCGT

CRISPR arrays and Neighbor proteins around NZ_AP022575_4

CRISPR arrays

The CRISPR arrays of NZ_AP022575_4

>merge|NZ_AP022575|4|318879-319379|CRISPRCasFinder
GGTGGGGCTGGGGGCGCCGGCGGCGCCGGGGGCACCGGCGGGTTGTTGTTCGGTGACGGCGGCGCCGGCGGGCACGGTGCAGTCGGCGGCGCCGGCGGCAACGGCGGCAACACCACCGGCTTTCCCAGCTCCATCGGCGGTCCGGGCGGCGATGCCGGCAACGGCGGGGCCGGCGGCACCGGTGGGGCCGGCGGCAACGCCAGGCTGTGGGGCGTCGGCGGCACCGGCGGGGCCGGCGGGGACGGGGGCGTCGGCGGCGCCGGCGGCAAGGGCGGCCCCGGCCTGGGCGGCAACAACAGCGGCGGGCCGGCGGCGACAGCGGCCGTGGCGGCACGGGCGGCGCCGGCGGCGAGGGCGGCGCCGCCGGGCTGCTGGTGGGCACCGGCGGGCACGGCGGTGACGGCGGGCGGCGCCGCCGTCAAGGGCGGTGACGGCGGGGCCGCCGCCGGCACGGGCATCGCCGGCGCCGGCGGCCGTGGCGGCGCGGGCGGCAGCGGTGGC

>NZ_AP022575|4|2|318879-319379|CRISPRCasFinder
GGTGGGGCTGGGGGCGCCGGCGGC	GCCGGGGGCACCGGCGGGTTGTTGTTCGGTGAC
GGCGGCGCCGGCGGGCACGGTGCA	GTCGGCGGCGCCGGCGGCAACGGCGGCAACACCACCGGCTTTCCCAGCTCCATC
GGCGGTCCGGGCGGCGATGCCGGC	AACGGCGGGGCCGGCGGCACC
GGTGGGGCCGGCGGCAACGCCAGG	CTGTGGGGCGTCGGCGGCACC
GGCGGGGCCGGCGGGGACGGGGGC	GTCGGCGGCGCCGGCGGCAAGGGCGGCCCCGGCCTGGGCGGCAACAACAG
CGGCGGGCCGGCGGCGACAGCGGC	CGTGGCGGCACGGGCGGCGCC
GGCGGCGAGGGCGGCGCCGCCGGG	CTGCTGGTGGGCACC
GGCGGGCACGGCGGTGACGGCGGG	CGGCGCCGCCGTCAAGGGCGGTGACGGC
GGGGCCGCCGCCGGCACGGGCATC	GCCGGCGCCGGCGGCCGT
GGCGGCGCGGGCGGCAGCGGTGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083051357.1|330282_331584_+|PhoH-family-protein	unknown	unknown	gnl|CDD|224787
NZ_AP022575.1|WP_083052598.1|321094_322186_+|hydroxyneurosporene-methyltransferase	unknown	unknown	gnl|CDD|366359
NZ_AP022575.1|WP_083051354.1|331610_332486_+|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|213022
NZ_AP022575.1|WP_083051348.1|333741_335163_-|class-II-fumarate-hydratase	unknown	unknown	gnl|CDD|234779
NZ_AP022575.1|WP_083052429.1|317113_317569_+|glycosyl-hydrolase-family-12	unknown	unknown	gnl|CDD|366751
NZ_AP022575.1|WP_083052390.1|309430_309925_-|transcription-elongation-factor-GreA	unknown	unknown	gnl|CDD|234693
NZ_AP022575.1|WP_083052596.1|322300_322714_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083052396.1|310674_311547_+|mycothiol-conjugate-amidase-Mca	unknown	unknown	gnl|CDD|132487
NZ_AP022575.1|WP_083051360.1|329247_330075_+|acyl-ACP-desaturase	unknown	unknown	gnl|CDD|153109
NZ_AP022575.1|WP_083052400.1|311543_311810_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_163662704.1|325562_326717_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_163662707.1|332549_333503_-|hypothetical-protein	unknown	unknown	gnl|CDD|372351
NZ_AP022575.1|WP_163662701.1|307444_308152_+|RDD-family-protein	unknown	unknown	gnl|CDD|377640
NZ_AP022575.1|WP_083052423.1|314782_315571_+|isoprenyl-transferase	unknown	unknown	gnl|CDD|237825
NZ_AP022575.1|WP_083052393.1|310152_310587_-|DUF4307-domain-containing-protein	unknown	unknown	gnl|CDD|379491
NZ_AP022575.1|WP_083052420.1|313894_314635_-|hemolysin-III-family-protein	unknown	unknown	gnl|CDD|273425
NZ_AP022575.1|WP_083051365.1|326756_327695_-|type-I-pantothenate-kinase	unknown	unknown	gnl|CDD|235466
NZ_AP022575.1|WP_083052403.1|311796_313836_+|thioredoxin-domain-containing-protein	unknown	unknown	gnl|CDD|224250
NZ_AP022575.1|WP_083051363.1|327833_329114_+|serine-hydroxymethyltransferase	unknown	unknown	gnl|CDD|234571
NZ_AP022575.1|WP_083052387.1|308193_309378_+|cystathionine-gamma-synthase	unknown	unknown	gnl|CDD|236104

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083051357.1|330282_331584_+|PhoH-family-protein	gnl|CDD|224787	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only].	0
NZ_AP022575.1|WP_083052598.1|321094_322186_+|hydroxyneurosporene-methyltransferase	gnl|CDD|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	4.12641e-47
NZ_AP022575.1|WP_083051348.1|333741_335163_-|class-II-fumarate-hydratase	gnl|CDD|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
NZ_AP022575.1|WP_083052429.1|317113_317569_+|glycosyl-hydrolase-family-12	gnl|CDD|366751	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12.	2.33258e-34
NZ_AP022575.1|WP_083052390.1|309430_309925_-|transcription-elongation-factor-GreA	gnl|CDD|234693	PRK00226, greA, transcription elongation factor GreA; Reviewed.	5.09898e-67
NZ_AP022575.1|WP_083052396.1|310674_311547_+|mycothiol-conjugate-amidase-Mca	gnl|CDD|132487	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca. Mycobacterium tuberculosis, Corynebacterium glutamicum, and related species use the thiol mycothiol in place of glutathione. This enzyme, homologous to the (dispensible) MshB enzyme of mycothiol biosynthesis, is described as an amidase that acts on conjugates to mycothiol. It is a detoxification enzyme. [Cellular processes, Detoxification].	0
NZ_AP022575.1|WP_083051360.1|329247_330075_+|acyl-ACP-desaturase	gnl|CDD|153109	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain. Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 10 to yield oleic acid in the ACP-bound form. The enzymatic reaction requires molecular oxygen, NAD(P)H, NAD(P)H ferredoxin oxido-reductase and ferredoxin. The enzyme is active in the homodimeric form; the monomer consists mainly of alpha-helices with the catalytic diiron center buried within a four-helix bundle. Integral membrane fatty acid desaturases that introduce double bonds into fatty acid chains, acyl-CoA desaturases of animals, yeasts, and fungi, and acyl-lipid desaturases of cyanobacteria and higher plants, are distinct from soluble acyl-ACP desaturases, lack diiron centers, and are not included in this CD.	1.00821e-45
NZ_AP022575.1|WP_083051354.1|331610_332486_+|polysaccharide-deacetylase-family-protein	gnl|CDD|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	1.94963e-69
NZ_AP022575.1|WP_163662707.1|332549_333503_-|hypothetical-protein	gnl|CDD|372351	pfam12868, DUF3824, Domain of unknwon function (DUF3824). This is a repeating domain found in fungal proteins. It is proline-rich, and the function is not known.	0.0012628
NZ_AP022575.1|WP_163662701.1|307444_308152_+|RDD-family-protein	gnl|CDD|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	5.22599e-22
NZ_AP022575.1|WP_083052423.1|314782_315571_+|isoprenyl-transferase	gnl|CDD|237825	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional.	5.84623e-123
NZ_AP022575.1|WP_083052393.1|310152_310587_-|DUF4307-domain-containing-protein	gnl|CDD|379491	pfam14155, DUF4307, Domain of unknown function (DUF4307). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 132 and 153 amino acids in length. There is a single completely conserved residue C that may be functionally important.	8.8428e-33
NZ_AP022575.1|WP_083052420.1|313894_314635_-|hemolysin-III-family-protein	gnl|CDD|273425	TIGR01065, Hypothetical_UPF0073_protein_yqfA., channel protein, hemolysin III family. This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.	6.93462e-71
NZ_AP022575.1|WP_083051365.1|326756_327695_-|type-I-pantothenate-kinase	gnl|CDD|235466	PRK05439, PRK05439, pantothenate kinase; Provisional.	0
NZ_AP022575.1|WP_083052403.1|311796_313836_+|thioredoxin-domain-containing-protein	gnl|CDD|224250	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones].	0
NZ_AP022575.1|WP_083051363.1|327833_329114_+|serine-hydroxymethyltransferase	gnl|CDD|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_AP022575.1|WP_083052387.1|308193_309378_+|cystathionine-gamma-synthase	gnl|CDD|236104	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional.	0

Protein sequences

>NZ_AP022575.1|WP_083052429.1|317113_317569_+|glycosyl-hydrolase-family-12
MGTTLPLRLGQIQSATTSIDYAYPSIGIWNASYDIWLDSTPKTTGVNQQEIMIWINHQGPIQPVGSPVGNATVGGRTVVVWDGSNGQNNVMSCVAASPMEVWSFDVMDFVDHTATMEPITDSWYLTSIQAGFEPWSGGVGLGVDSFPANID
>NZ_AP022575.1|WP_083052423.1|314782_315571_+|isoprenyl-transferase
MEIIPARLKQPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSFGYRMGAAKIAEMLRWCQEAGIEMTTVYLLSTENLRRDPDELAALIEIITDVVEEICAPANRWSVRTVGDLELLGEEPARRLRGAVESTPEVASFHVNVAVAYGGRREIVDAVRALLSKELANGATAEELIDAVTIEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRHVDFLRALRDYSLRHRRYGG
>NZ_AP022575.1|WP_083052420.1|313894_314635_-|hemolysin-III-family-protein
MTSQASTVTKPEPESHGHTPSDAAHQLVEGVARVLTKPRFRGWIHVYSAGAAVFAGASLVAVSWALGSTKAGLATLAYTAATILMFTVSATYHRVNWRSQTAHKWMKRADHSMIFVFIAGSYTPFALLALPGHDGHVVLSIVWGGALAGTLLKMCWPSAPPWVGVPLYLLLGWVAVWYTAAILHNAGVTAMVLLFVGGALYSIGGILYALRWPDPWPTTFGFHEFFHACTAVAAICHYIAMWFVVF
>NZ_AP022575.1|WP_083052403.1|311796_313836_+|thioredoxin-domain-containing-protein
MSPPDPSGTNTLAQATSPYLRQHADNPVHWQQWTPQALAAAATRDVPILLSVGYAACHWCHVMAHESFEDHEVAAAMNAGFVCIKVDREERPDIDAVYMNATVALTGQGGWPMTCFLTPDGRPFFCGTYYPKEAFLQLLSAVSAAWRQRRGEVEQAAGHIAGELRSMASALPGPPGSGPDVAPELCDHAVAAVLREQDAAHGGFGIAPKFPPSALLEALLRHYERTGSAAALQAVSRTGDAMARGGIYDQLAGGFARYSVDSAWVVPHFEKMLYDNALLLRAYAHWARRTGDRLARRVATQTARFLLSELGSKVPAAVFTSSLDADADGREGSTYVWTPAQLTEVLGVDDGRWAAEVFGVTESGTFEHGTSVLRLPSDPDDPQRLERIRAELLAARLARVQPERDDKVVTSWNGLAITALAEASVALGDPELAHAARRCATTLLGMHVVDGRLRRASLGGVVGDGAAVLEDYAMLATGLLTLYQLTSDAAWLTAATELLDSALAHFGDPQRPGRWFDTADDAEQLVLRPSDPLDGATPSGASAIAEALLTAAQLVDGGRADRYLRAAADTLRAHAVLLARAPRSAGHWLSVAEAAVRGPLQIAVACDPSRSALLADARRLAPGGAIVVGGAMDSSALLTGRDRVGGADAAYVCRGRVCDLPVTTTSELTAALGADGRRK
>NZ_AP022575.1|WP_083052400.1|311543_311810_+|hypothetical-protein
MNPFLLTVIADGAPGNPGPEFGKASPLGLLVVVLLVIATLFLLRSMNRQLKKVPKSFDRDNPELDQAADEGTDRDGSARPPEPPDEPA
>NZ_AP022575.1|WP_083052396.1|310674_311547_+|mycothiol-conjugate-amidase-Mca
MSELRLMAVHAHPDDESSKGAATLARYADEGHRVLVVTLTGGERGEILNPAMDLPDVHRHIAEIRRDEMAKAAEILGVEHTWLGFVDSGLPQGDPPPPLPEGCFAMVPLEEATEALVRVVREFRPHVMTTYDENGGYPHPDHIRCHQVSVAAFEAAGDYRRFPDAGAPWTVSKLYYIHGFLRERVQMLQDEFVRRGQEGPFGKWLEHWHPDHDPYANRVTTRVECSAYFAQRDDALRAHATQIDPNAEFFAAPLSWQQELWPTEEFELARSRVPAHLPETELFAGIEPDR
>NZ_AP022575.1|WP_083052393.1|310152_310587_-|DUF4307-domain-containing-protein
MSPAPVSRPEARYGHERLSRPARRRLAIVLGVLVVAAGLAVAVNGYQRIATSAVTGTLTGYRLIDDETASVTIGVTRSDPSRPVACIVRARAADGSEAGRREVLVVPANQHTVAVTTTVKASKPPAMADVYGCGTAVPAYLRPP
>NZ_AP022575.1|WP_083052390.1|309430_309925_-|transcription-elongation-factor-GreA
MADTHVTWLTQESHDRLKAELDQLIANRPIIAAEINDRREEGDLRENGGYHAAREEQGHQEARIRQLQDLLNNAKVGEAPEQSGVALPGSVVTVYYNGDESDSETFLIATRQEAVSDGKLEVYSPNSPLGRALIDAKVGETRSYTVPNGSTVSVTLVSAEPYRP
>NZ_AP022575.1|WP_083052387.1|308193_309378_+|cystathionine-gamma-synthase
MSEDAARRHPFTGLATTAIHAGSRPDPATGAVNTPIYASSTFAQDGVGGLRGGFEYARTGNPTRAALEAALAAVEAGTFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTHWGVDYTPVALADLDAVRAAITARTRLIWVETPTNPLLSIADIAAIAALAADSSVKVLVDNTFASPALQQPLTLGADVVLHSTTKYIGGHSDVVGGALVTNDEALDRAFAFLQNGTGAVPGPFDAYLTLRGLKTLVLRMQRHSENAAAVAEFLAGHPAVSAVLYPGLPAHRGHEIAARQMRGFGGMVSLRMRAGRQAAMDLCANTKVFILAESLGGVESLIEHPGTMTHASTVGSRLEVPDDLVRLSVGIEDVADLLGDIEQALAQLGEQT
>NZ_AP022575.1|WP_163662701.1|307444_308152_+|RDD-family-protein
MSDQPPGGSYPPPPPPPSEGNEPPSGSYPPPPGGSYPPPPSGSYPPPPPPPPGGSYPPAPPSAGGYAPPPPGPAIRDMPTESYTPWFTRVLAALIDLAPYLVIIGIGWVIMLVTQTSSCVTNVGQYEVGQYCVSGPSMIGQLAQWLLYLVGLAYLVWDYGYRQGTTGSSIGKSVMKFKVVSETTGQPLGFGMSVVRQLAHVVDAIICYIGFLFPLWDRKRQTLADKIMTTVCLPI
>NZ_AP022575.1|WP_083052598.1|321094_322186_+|hydroxyneurosporene-methyltransferase
MGASRVPPAGVVRVIERARHHLIGLHRRLVPAPVALIEMILDAWAAQAITAAADLGIADALAHGPLSAEELAAAVDADADALARLLRALIGRGIFRQRHDGRYELTPLADALRSDADVSLAGMARWVGAPQHREHWSRLTHAVRSGRSVVPELRGKPAFDYLAAEPELAEIFNQAMTGTTELSIAPVVAAYDFSPCATVVDVGGGHGRLLAAILDATPHARGILFDQTHVVAGAPALLAEHQVVDRVRIEEGSFFDDAIPRGGDTYVLKNIIHDWPDDDAARILGNVRAAAGAGSKALLIEQVIPPHHRDFTGKWLDLEMLVALGARERTAAEYQRLLQRAGFGGMRVIGTASPYSVIEATAI
>NZ_AP022575.1|WP_083052596.1|322300_322714_+|hypothetical-protein
MTAVFGPLTRPLYDSTDSLLRFAMRADATLTGLIGLAVAVAAHPVSGLTGPTAGQEYGVGTFFVLYGLVVFGLAALPNVRRAGSGVVAANMVYTLAAVVAAELVPMTTTGIAATLASGGYTAGFAGLQYLGVRRLPA
>NZ_AP022575.1|WP_163662704.1|325562_326717_+|hypothetical-protein
MFGDAGAGGDGGAGGIGILAALGGKGGHGGAGGSAGLWGAGGAGGAGGIGGAGGNGFLSGLTGVSGGDGGAGGSGGAGGAGGLLFGDGGLGGHGAAGGGGGLGASSITPSIGPGAAGGAGGDGGAGGAGGAGGNARLWGIGGAGGAGGVGGNAGHAGNGANGGTQGLINPAQGGPGGNGGNGGIGGVGGAGGNGGHGGLLYGAAGGGGHGADGGNAGNGGTGGSATGSSTVQGKGGNGGSGGAGGVGGTGGGSASGGAAWGVGTGGAGGHGGSGGDGGVRGTGPGGNGVNGNGGAGADGGEGGPGGFLYGNGGAGGDAGAGGASGGTGATAGAGGKGGDGGNAQLIGDGGHGGAGGKGTPNGPGGAGGAKGQLSGQPGAAGASP
>NZ_AP022575.1|WP_083051365.1|326756_327695_-|type-I-pantothenate-kinase
MTRVSEPSPYIEFDRKQWRALRMSTPLALTEEELIGLRGLGEQIDLLEVEEVYLPLARLIHLQVAARQRLFAATAEFLGEPQQNPDRPVPFIIGVAGSVAVGKSTTARVLQALLARWDHHPRVDLVTTDGFLYPNAELERRNLMHRKGFPESYNRRALMRFVTSVKSGSDYACAPVYSHLRYDIIPGAKHVVRHPDILILEGLNVLQTGPTLMVSDLFDFSLYVDARIEDIEQWYVSRFLAMRTTAFANPESHFHHYAALSDSQAVIAAKEIWRSINRPNLVENILPTRPRATLVLRKDADHSINRLRLRKL
>NZ_AP022575.1|WP_083051363.1|327833_329114_+|serine-hydroxymethyltransferase
MSAPLADIDPDIAELLAKELGRQRDTLEMIASENFAPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDMVENIARDRAKALFGAEFANVQPHSGATANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYQTGFYGVDPTTHVIDMDAVRVKALEFRPKVIIAGWSAYPRILDFPAFRSIADEVGATLLVDMAHFAGLVAARLHPSPVPHADVVSTTVHKTLGGGRSGLIVGKQEYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFAERQRRTLSGARIIADRLLAADVANAGVSVVSGGTDVHLVLVDLRNSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDAEFTEVADIIATALAAGSSADIAGLRQRATRLAREFPLYEGLEEWSLVGR
>NZ_AP022575.1|WP_083051360.1|329247_330075_+|acyl-ACP-desaturase
MAQKPVANALTLELEPVVEENMARHLATEDIWFAHDYVPFDRGENFAFLGGRDWDPSQATLPRAITDACEILLILKDNLAGYHRELVEHFILEDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPTANEDVRVQHVMKGYRADRYTQVETLVQMAFTERCYAVFCRNLAAKLEEPILAGLIDRIARDEARHEEFFANLVTHLLGHVRDETIAAIAARAGDLQVLGADIDAYQDKLENVADAGIFGPTQLRQVICDRITAWGLAGEPQLTRFVTG
>NZ_AP022575.1|WP_083051357.1|330282_331584_+|PhoH-family-protein
MTDIRTYVLDTSVLLSDPWACGRFAEHEVVVPLVVISELEAKRHHHELGWFARQALRLFDDLRLEHGRLDQPIPVGTQGGSLRVELNHTDPAVLPAGFRTDSNDSRILSCAANLAAEGKRVTLVSKDIPLRVKAAAVGLAADEYHAQDVIASGWSGMHEIETAAADIDALFADGEIDLAEARDLPCHTGIRLLGGGSHALGRVTPAKRVQLVRGDREVFGLRGRSAEQRVALDLLLDESIGIVSLGGKAGTGKSALALCAGLEAVLERRTQRKVVVFRPLYAVGGQDLGYLPGSESDKMGPWAQAVFDTLEGLASPAVLEEVLSRGMLEVLPLTHIRGRSLHDSFVIVDEAQSLERNVLLTVLSRLGAGSRVVLTHDIAQRDNLRVGRHDGVAAVIEKLKGHPLFAHITLLRSERSPIAALVTEMLEEIAGPR
>NZ_AP022575.1|WP_083051354.1|331610_332486_+|polysaccharide-deacetylase-family-protein
MPKRPDNLAWRYWRTVVGVVAAAVVLLVGGLTGHITRADDPNCSVVKCVALTFDDGPGPYTDRLLKILADNDAKATFFLIGNKVAANPAGAQRIAEAGMEIGSHTWEHPNMTTIPPADIPGQFSRANDAITAATGRTPSLYRPAGGLSNDAVRQAAASFGQAEILWDVIPFDWINDSNTAATRQLLMAQVKPGSVVLFHDTYSSTVDLVYQFMPVLKANGYRLVTVSELLGPRAPGSSYGRRENGPAVNELHDIPASEIPPLPNTPSPTPMPNFPITDIPGQNSGGPNNGA
>NZ_AP022575.1|WP_163662707.1|332549_333503_-|hypothetical-protein
MTAPPGGPHGNHPYGADPYGQQPYWGDQTQGGGYGPGGPYPPGGPYPPGGYPPQQPPPPGQQYAPGWPAGPYPPAPPPRGPGSTLPWLILAGVAVLGVIVLVVILVVAVGNWGKSPTATPSSPAVTSAAPTSQPNASPQTATDCTPNVSGGDRPDGDTVSAGKLSFPTSAAPGWSPFSDDQNPNLIDAVGLGQEVPGANQWMMQVEVAVTNFVTSMDVSAQASTLLRCVANGPGYVQSSPTLGPMKTSSTTVDGVKAARVDADITIADTSRGVQGDTVTIIAVDTKPVTIFLGATPIGDAASAATVNRVIAALKVRR
>NZ_AP022575.1|WP_083051348.1|333741_335163_-|class-II-fumarate-hydratase
MAADAGDNDIDYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRGLERAQIRALGLLKGACAEVNKDLGLLAPDKADAIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNANEVIASIAAAGGVTVHPNDDVNMSQSSNDTFPTATHVAATEAAVRHLIPALQVLHTALSAKALEWQTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAPEGFGTKVVAVLVTQTGLSELRTAANAFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFRLLTNVSKLFAQRCIAGLTANVEHLRQLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLIGDKLSIEELDRRLDVLAMAKVEPVDT

Crispr_ID: NZ_AP022575_5

• CRISPR_ID: NZ_AP022575_5
• CRISPR_location: 413329-413548
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NZ_AP022575_5

Consensus_repeat	Method
GCGGCGGTACCAGCGGCGG	CRT

spacers of NZ_AP022575_5

>5.1|413348|23|NZ_AP022575|CRT
CGGTACCAGCGGCGGTGACACCA
>5.2|413390|38|NZ_AP022575|CRT
TGACACCAGCGGCGGCGGTACCAGTGGCGGTGACACTG
>5.3|413447|26|NZ_AP022575|CRT
CGGTGACACCAGCGGCGGTGACACTG
>5.4|413492|38|NZ_AP022575|CRT
TGACACCAGCGGCGGTGACACTGGCGGCGGTGACACCA

CRISPR arrays and Neighbor proteins around NZ_AP022575_5

CRISPR arrays

The CRISPR arrays of NZ_AP022575_5

>merge|NZ_AP022575|5|413329-413548|CRT
GCGGTGACACTACCGGCGGCGGTACCAGCGGCGGTGACACCAGCGGCGGTACCAGCGGCGGTGACACCAGCGGCGGCGGTACCAGTGGCGGTGACACTGGCGGCGGTACCAGCAGCGGCGGTGACACCAGCGGCGGTGACACTGGCGGCGGTACCAGCGGCGGTGACACCAGCGGCGGTGACACTGGCGGCGGTGACACCAGCGGCGGTACCAGCGGTGG

>NZ_AP022575|5|2|413329-413548|CRT
GCGGTGACACTACCGGCGG	CGGTACCAGCGGCGGTGACACCA
GCGGCGGTACCAGCGGCGG	TGACACCAGCGGCGGCGGTACCAGTGGCGGTGACACTG
GCGGCGGTACCAGCAGCGG	CGGTGACACCAGCGGCGGTGACACTG
GCGGCGGTACCAGCGGCGG	TGACACCAGCGGCGGTGACACTGGCGGCGGTGACACCA
GCGGCGGTACCAGCGGTGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083050703.1|405567_406056_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083050706.1|406021_406900_-|PE-family-protein	unknown	unknown	gnl|CDD|376422
NZ_AP022575.1|WP_163662743.1|409864_411313_+|PE-domain-containing-protein	unknown	unknown	gnl|CDD|119360
NZ_AP022575.1|WP_083050733.1|423801_424605_-|sulfotransferase	unknown	unknown	gnl|CDD|286169
NZ_AP022575.1|WP_083050709.1|407025_409578_+|bifunctional-FO-biosynthesis-protein-CofGH	unknown	unknown	gnl|CDD|236422
NZ_AP022575.1|WP_163662749.1|419907_422721_-|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl|CDD|223989
NZ_AP022575.1|WP_083050715.1|415033_415366_-|hemophore-related-protein	unknown	unknown	gnl|CDD|275322
NZ_AP022575.1|WP_083050697.1|403185_404340_+|PE-family-protein	unknown	unknown	gnl|CDD|376422
NZ_AP022575.1|WP_083049666.1|397327_397723_+|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl|CDD|239517
NZ_AP022575.1|WP_083050755.1|422832_423081_+|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl|CDD|226603
NZ_AP022575.1|WP_083050718.1|415573_417604_-|NADPH-dependent-2,4-dienoyl-CoA-reductase	unknown	unknown	gnl|CDD|239240
NZ_AP022575.1|WP_083050691.1|399265_401140_+|translational-GTPase-TypA	unknown	unknown	gnl|CDD|224138
NZ_AP022575.1|WP_083050736.1|424679_425075_-|PIN-domain-containing-protein	unknown	unknown	gnl|CDD|350299
NZ_AP022575.1|WP_083050721.1|417600_418170_-|PadR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|378427
NZ_AP022575.1|WP_083050724.1|418371_418698_+|ferredoxin-family-protein	unknown	unknown	gnl|CDD|224069
NZ_AP022575.1|WP_083050730.1|423077_423458_+|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350299
NZ_AP022575.1|WP_083050694.1|401144_403049_+|ABC-transporter-family-substrate-binding-protein	unknown	unknown	gnl|CDD|173866
NZ_AP022575.1|WP_158084786.1|405463_405616_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083050725.1|418730_419831_+|succinyldiaminopimelate-transaminase	unknown	unknown	gnl|CDD|236119
NZ_AP022575.1|WP_083050700.1|404555_405449_+|N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha--D-glucopyranoside-deacetylase	unknown	unknown	gnl|CDD|274584

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083050706.1|406021_406900_-|PE-family-protein	gnl|CDD|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	1.47477e-28
NZ_AP022575.1|WP_083050697.1|403185_404340_+|PE-family-protein	gnl|CDD|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	1.24588e-30
NZ_AP022575.1|WP_083050733.1|423801_424605_-|sulfotransferase	gnl|CDD|286169	pfam09037, Sulphotransf, Stf0 sulphotransferase. Members of this family are essential for the biosynthesis of sulpholipid-1 in prokaryotes. They adopt a structure that belongs to the sulphotransferase superfamily, consisting of a single domain with a core four-stranded parallel beta-sheet flanked by alpha-helices.	1.0039e-109
NZ_AP022575.1|WP_083050709.1|407025_409578_+|bifunctional-FO-biosynthesis-protein-CofGH	gnl|CDD|236422	PRK09234, fbiC, FO synthase; Reviewed.	0
NZ_AP022575.1|WP_163662749.1|419907_422721_-|DEAD/DEAH-box-helicase-family-protein	gnl|CDD|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	1.5193e-40
NZ_AP022575.1|WP_083050715.1|415033_415366_-|hemophore-related-protein	gnl|CDD|275322	TIGR04529, hypothetical_protein, hemophore-related protein, Rv0203/Rv1174c family. Members of this family occur as paralogs in most Mycobacterium strains, including 2 in M. tuberculosis, 6 in M. avium, and 9 in M. smegmatis. Members have a cleaved N-terminal signal peptide and exactly two Cys residues in the mature protein, both at invariant positions. The best characterized member, Rv0203, is a hemophore, that is, a secreted polypeptide that binds heme and delivers it to a transport system for import. Hemophores are protein analogs of siderophores, natural products that chelate non-heme iron and deliver it to receptors for transport. The unrelated HasA family of hemophores has been described in Gram-negative bacteria such as Yersinia pestis and Pseudomonas aeruginosa. [Transport and binding proteins, Other].	5.89561e-15
NZ_AP022575.1|WP_163662743.1|409864_411313_+|PE-domain-containing-protein	gnl|CDD|119360	cd06543, GH18_PF-ChiA-like, PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.	1.05184e-36
NZ_AP022575.1|WP_083049666.1|397327_397723_+|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase	gnl|CDD|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	2.89572e-35
NZ_AP022575.1|WP_083050755.1|422832_423081_+|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl|CDD|226603	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning].	2.9026e-11
NZ_AP022575.1|WP_083050718.1|415573_417604_-|NADPH-dependent-2,4-dienoyl-CoA-reductase	gnl|CDD|239240	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provides a hydrid ion to the C5 atom of substrate, and Tyr and His are proposed to form a catalytic dyad that protonates the C4 atom of the substrate and completes the reaction.	0
NZ_AP022575.1|WP_083050691.1|399265_401140_+|translational-GTPase-TypA	gnl|CDD|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_AP022575.1|WP_083050736.1|424679_425075_-|PIN-domain-containing-protein	gnl|CDD|350299	cd18732, PIN_MtVapC4-C5_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 toxin of the VapBC toxin/antitoxin (TA) system. This family belongs to the PIN_VapC4-5_FitB-like subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. M. tuberculosis VapC4 interacts with, and cleaves tRNA44Cys-GCA. M. tuberculosis VapC5 has endonucleolytic activity with RNA, this activity is low with dsRNA, and no activity has been demonstrated on dsDNA. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	6.66684e-18
NZ_AP022575.1|WP_083050730.1|423077_423458_+|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350299	cd18732, PIN_MtVapC4-C5_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 toxin of the VapBC toxin/antitoxin (TA) system. This family belongs to the PIN_VapC4-5_FitB-like subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. M. tuberculosis VapC4 interacts with, and cleaves tRNA44Cys-GCA. M. tuberculosis VapC5 has endonucleolytic activity with RNA, this activity is low with dsRNA, and no activity has been demonstrated on dsDNA. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.61649e-41
NZ_AP022575.1|WP_083050724.1|418371_418698_+|ferredoxin-family-protein	gnl|CDD|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	2.99611e-11
NZ_AP022575.1|WP_083050694.1|401144_403049_+|ABC-transporter-family-substrate-binding-protein	gnl|CDD|173866	cd08501, PBP2_Lpqw, The substrate-binding domain of mycobacterial lipoprotein Lpqw contains type 2 periplasmic binding fold. LpqW is one of key players in synthesis and transport of the unique components of the mycobacterial cell wall which is a complex structure rich in two related lipoglycans, the phosphatidylinositol mannosides (PIMs) and lipoarabinomannans (LAMs). Lpqw is a highly conserved lipoprotein that transport intermediates from a pathway for mature PIMs production into a pathway for LAMs biosynthesis, thus controlling the relative abundance of these two essential components of cell wall. LpqW is thought to have been adapted by the cell-wall biosynthesis machinery of mycobacteria and other closely related pathogens, evolving to play an important role in PIMs/LAMs biosynthesis. Most of periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the LpqW protein. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.1762e-131
NZ_AP022575.1|WP_083050721.1|417600_418170_-|PadR-family-transcriptional-regulator	gnl|CDD|378427	pfam10400, Vir_act_alpha_C, Virulence activator alpha C-term. This structure is homo-dimeric, and the domain here is the C-terminal half of the structure, often associated with PadR upstream, (pfam03551), which is a transcriptional regulator.	1.33089e-21
NZ_AP022575.1|WP_083050725.1|418730_419831_+|succinyldiaminopimelate-transaminase	gnl|CDD|236119	PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed.	0
NZ_AP022575.1|WP_083050700.1|404555_405449_+|N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha--D-glucopyranoside-deacetylase	gnl|CDD|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	3.56882e-147

Protein sequences

>NZ_AP022575.1|WP_163662743.1|409864_411313_+|PE-domain-containing-protein
MSFVIADPGMVVAAATDLEAVRSALNAANAAASQTTKVVAMAADDVSAAIAAWFDTYAREYQAVNARAAAFHAQFVQTLTASAGSYAGTEVANASPLQSTAQEAPGTVNAPAEGNGGSLIGKVGVGESAVASVNGGAGGGQAATSAAVVSPNPGNVTSNAESGTSSTAPSGIAASGIAASGIAASGGGTTGGGVGVTYAVTSQWDGGFVAQYTITNSGEAALSNWRVEFDLPANESITSVWNGQLAQADTHYVLTPESWTQTIAPGGSVVVGFQAAQTGAYSPPTNVSVNGEPVSGTTSGGGTTSGGGTTTGGGTTTGGGTTSGGGTTSGGGTSGAMSGEFSPYIDMTLWPPLTNANAVALADAGVDDATLAFIVSGAGNQPAWGGVYSLTDPVITSQISALRGAGIDPTISFGGANGVDLAYTAPSATVLAEQYESVVSAFGIYKFDFDVEGGMQANTAVLTKQAQAIAMLQAEQAAAGTG
>NZ_AP022575.1|WP_083050709.1|407025_409578_+|bifunctional-FO-biosynthesis-protein-CofGH
MAPTALPCPVVPPKADASALRRVLRRARDGVLLNVDEAAVAMTARGDALADLCASAARVRDAGLTSAGRRGAGGRLPISYSRKVFIPVTRLCRDKCHYCTFVAVPGKLRAEGAGMYLEPDEILEVARRGGELGCKEALFTLGDRPEARWPEAREWLGQRGYDSTLSYVRAMAIRVLEETGLLPHLNPGVMSWSEMSRLKPVAPSMGMMLETTSRRLFETKGLAHYGSPDKDPAVRLRALTDAGRLSIPFTTGLLVGIGETLSERAATLHAIRKSHKEFGHIQEVIVQNFRAKEHTAMAAFPDAGIEDYLATVAVARLVLGPGMRIQAPPNLVSRNECLALVGAGVDDWGGVSPLTPDHVNPERPWPAVDELAAVTAEAGYELVQRLTAQPKYVLAGAAWIDPRVRKYVLALADPATGFARDGNPVGMPWQEPDEVESCGRVDLNAAIDTAGRNTQTRSDLDSAFGDWESIRAQVHELAVRAPERIDTDVLAALRSAERDPAGCTDEEYLTLATADGPALDAVAALADSLRRDVVGDDVTFVVNRNINFTNICYVGCRFCAFAQRKGDADAYSLSTAEVAERAWQAHLAGATEVCMQGGIDPELPVTGYADLVRAVKARVPSMHVHAFSPMEIANGVTKSGLSIREWLIGLREAGLDTIPGTAAEILDDEVRWVLTKGKLPSSLWIEIVTTAHEVGLRSSSTMMYGHVDSPRHWVAHLNVLRAIQDRTGGFTEFVPLPFVHQNSPLYLAGAARPGPTHRDNRAVHALARIMLHGRIAHIQTSWVKLGVDGTRVMLNGGANDLGGTLMEETISRMAGSEHGSAKTAAELVAIAEGIGRPARQRTTTYAPLAA
>NZ_AP022575.1|WP_083050706.1|406021_406900_-|PE-family-protein
MSFVHAAPPALTAAASEIAGIGSTINAANAAAASPTTGVMAAAADQVSAQVAALFSSYGQGYQQLSAQFAAFHDQFAQALNASANAYAATEASAAQNLVNALTSPAEKLLGQPMIDQSGIAPNVVSQLQNVFAGTGGSSVLGGAAAANIGAGAAALAPTGGTGALAAGNALLQPVASAAAAAVIPVSVATAIENFYLAVEPWVEYGFLLASWAAGWLPYVGILAPQIMFLYYLFEPIVQSALFNTLDWLDGTITFSQGLSNLWAATDASLTQFIITEINWLLSFLPPLPPLP
>NZ_AP022575.1|WP_083050703.1|405567_406056_+|hypothetical-protein
MGHRLDPVAARQRPDLTETQPPAADEGGATDPAIRFVVLALLAVDGALSAVVGALLMPWYIGAIPFPVSALISGLVNAALVWAAGHWTGSPRVAALPLWTWLLTVVVMVVGGPGDDVILGGRGPMAHGALILIVLGAAPPAWVLRRHRVSRATATAAAAGGS
>NZ_AP022575.1|WP_158084786.1|405463_405616_+|hypothetical-protein
MLLLLPHQAATEGIRMDPDLDPNLQHWQDRLDSLQWVIGSILSQLDSVPT
>NZ_AP022575.1|WP_083050700.1|404555_405449_+|N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha--D-glucopyranoside-deacetylase
MPETPRLLFVHAHPDDESLSNGATIAHYTARGARVEVVTCTLGEEGEVIGDRWAQLAVDHADQLGGYRIGELTAALRALGVGAPHYLGGAGRWRDSGMADTQPRRPRRFVDADEREVVGELVATIRRLRPHVVVTYDPNGGYGHPDHVHAHAVTTAAVARAGAGAGDHPGDPWTVPKFYWTVFGLSAFAAGARALGPEDLRPEWVLPSADEIHFGYADGRIDAVIEADADAHAAKVAALAAHATQVVIGPTGRACALSNNLALPILAQEHYVLAAGSAGARDERGWETDLLAGLGFS
>NZ_AP022575.1|WP_083050697.1|403185_404340_+|PE-family-protein
MSFLIASPEMVSAAATELASVGSTITGANSATAAATTEVIPAALDEVSAGIAAIFAEHGRVYQALGAQAAAFHDRFVRALNAGASAYAGAEANAAHALGGAVPGTVQALAASTPGSLLQQLETAQIDFNTNLVNSELTFNKALVANEVAWEKAIFGTDSALNGVINRGFNVANLLVGTGQQTINTLVGAPVPTNFTSTLLLGGSAQVFNDGQIGGPLGAFDQSLVLGADLAGLVVSGPPAQAVLSVLPEPTRAMVLHAPGELLQQLETAQINYNSGLVSNELSFNHALLANEVAWEKAIFGTDSALNGVVNRSFNVVNLLVGTGELALNGLSGAQVPQPAFTQSLLTGSSAQVFNGGQIGGLVGVFDQSLLVGADLVGLITGQA
>NZ_AP022575.1|WP_083050694.1|401144_403049_+|ABC-transporter-family-substrate-binding-protein
MGVPSPVRRVCRTVGALVALLGVVLSACTVSPPPAPQSTDTPHTTPPPPPHPTQIIMAIDSIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPSSPTGSRWEMDPTLLVSAEVTSENPFTVTYKIRPEAQWTDNAPIAADDFWYLWRQMVSQPGVVDPAGYDLITGVQSLEGGKQAVVTFAEPYPAWRELFNNILPAHIVKDAPGGFAAGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPAKPGLIQFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMSLTLRANLPKLADGQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRSPSDPGYVPTAPPAMSTAAALGLLSAAGFQIETNTSASPAPPGPGSATTPVSTGPPEVIRGRISKDGKQLSLVIGVAANDPTSVAVANTAADQLRNVGIAASVLALDPVTLYRDAVNDNRVDAIVGWHQAGGNLATLLASRFGCPALQATALSAGAPATTPAGPAATTPPATPDTAMPTPATPSRPPEPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ
>NZ_AP022575.1|WP_083050691.1|399265_401140_+|translational-GTPase-TypA
MPFRNVAIVAHVDHGKTTLVDAMLRQSGALPARGEPQERVLDTGDLEREKGITILAKNTAVHRHHGDGTVTVINVIDTPGHADFGGEVERGLSMVDGVLLLVDAAEGPLPQTRFVLRKALAARLPVILVVNKTDRPDARIAEVVEASHDLLLDVAADLDDAAAKAAEHALGLPTLYASGRAGVASTTPPPDGRVPNGTNLDPLFDVLEAHVPPPNGDPDAPLQALVTNLDASTFLGRLALIRIYNGRIRKGQQVAWLREAGVATARITELLATEGVERKPTDEAVAGDIVAVAGLPDIMIGDTLADLANPVALPRIIVDEPAISVTIGTNTSPLAGKVGGHKLTARLVRNRLDAELVGNVSIRVIDIGRPDAWEVQGRGELALAVLVEQMRREGFELTVGKPQVVTKTIDGKLHEPFEAMTVDCPEEYVGAVTQLMAGRKGRMVEMANHTTGWVRMDFVVPSRGLIGWRTDFLTETRGTGVAHAVFDGYRPWAGEIRARRSGSLVSDRSGTITAFALLQLADRGQFFVEPGQDTYQGMVVGINPRPDDLDINVTREKKLTNMRSSTADVIETLAKPLELDLERALEFCAPDECVEVTPEIVRVRKVELDVTARARGRARTKARG
>NZ_AP022575.1|WP_083049666.1|397327_397723_+|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase
MPTQIVVAGAIIRGDAVLVAQRARPPELAGRWELPGGKVAPGEPEHAALARELAEELGLHVDDIAVGDRLGDDIPLDDTTTLRAYRVRLIRGRPHPRDHTALRWVPAAELPDVDWVPADRGWLADLRRACI
>NZ_AP022575.1|WP_083050715.1|415033_415366_-|hemophore-related-protein
MRLSLAGVSAAAGALAMSLTVGAGVASADPGDAVINTTCNYGQVMAALNAQDPGAAAQLNASPVAQGWLHSFLAAPPARRAQMAAQLQAIPGAAQYYGLVISVANSCNNY
>NZ_AP022575.1|WP_083050718.1|415573_417604_-|NADPH-dependent-2,4-dienoyl-CoA-reductase
MSPYPNLLSPLDLGFTTLRNRVVMGSMHTGLEDRARHIDRLAEYFVERARGGVGMIITGGYAPNRTGWLYPFASELVSSAQARRHRRITNAVHDAGAKILLQILHAGRYAYHPLSVSASSIKAPINPFRPRALSSRGVAATIADFARCAQLAREAGYDGVEIMGSEGYLLNQFLAPRTNKRTDSWGGTPANRRRLPVEIVRHTRAAVGPDFIICYRMSMADYVEQGQTWDEIVALATEVEAAGATIINSGFGWHEARVPTIVTSVPSGAFVDISNAVAEHVSIPVMASNRINMPQAAEQILADTQVRLISMARPMLSDPEWVRKAHSDRADEINTCIACNQACLDHVFVKKPASCLLNPRAGRETLLVLSPTRRVRSVAVVGAGPAGLAAAVNAAQRGHRVTLFEANDFVGGQFDMARRIPGKEEFSETIRYFSTMLAKHGVEVRLGTRVTADEVTGLDHYDAVVLATGVAPRIPAIPGIDHPKVLTYAEAISGVQPVGRSVAVVGAGGIGFDVSELLVTQHSPTLNLKDWKAEWGVVDPREARGALTAPVPAPPARQVYLLQRSEGPQGKRLGKTTGWVHRASLKAKGVHQLSGVNYERITDDGLQISFGPDRQRPRLLAVDNVVICAGQEPVRDLENDLRRHGIDPHIIGGADHAAELDAKRAIRQGTELAARL
>NZ_AP022575.1|WP_083050721.1|417600_418170_-|PadR-family-transcriptional-regulator
MALLHAILVSLSEQAGSGYELAHRFDRSIGHFWTATHQQIYRTLRVMEDNGWVHATAVAQHGRPDKKVYTVSDSGRAELARWIAEPPSPTRPGRGSALTDGSTRDLAVKLRGAVYGDRTTLRSQVAALRAERVDALDTYRGIEKRSFPDPSALRGAALHQYLVLRGGIRAEESAIEWLDEVAQALEDKR
>NZ_AP022575.1|WP_083050724.1|418371_418698_+|ferredoxin-family-protein
MTYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDVPEQWSHYTQINADFFDELGSPGGAAKVGMTENDPQAVKDLPPQGEGD
>NZ_AP022575.1|WP_083050725.1|418730_419831_+|succinyldiaminopimelate-transaminase
MSAALPVFPWDTLAEATAVAGAHPDGIVDLSVGTPVDPVAPLIQQALAAASSAPGYPATAGTARLRASAVAALARRYGVTGLSEAAVVPVIGTKEFIAWLPTLLGLGTGDVVVVPELAYPTYDVGARLAGAQVVRADSLTQLGPQTPALVYLNSPSNPTGRTLGVEHLRKVVGWARERGRERGTVVASDECYLGLSWAAEPLSVLHPAVCDGDHTGLLAVHSLSKSSSLAGYRAGFVAGDVDLVAELLAVRRHAGMMVPTPVQAAMVAALDDDDHEQLQRERYARRRAALLPALRSAGFAVDHSEAGLYLWITRGEGCHQTVAWFAERGILVAPGEFYGPGGARHVRVALTATDERIAAAVQRLGS
>NZ_AP022575.1|WP_163662749.1|419907_422721_-|DEAD/DEAH-box-helicase-family-protein
MEPRRDLQSRGFAGTWRAYQRQALDAFDADVAAGDNRCYLVLPPGAGKTLIGLEAARRLGRRTLVLVPNTAVQAQWAAAWDHSFPATDPAVSRCGTERDLTSAMNVLTYQSLAVIDDESDATVRRAVLRSRDRQALLGLLHPNGRALIERAAGLGPWTLVLDECHHLLATWGALVSALASVLGPQTALIGLTATPPTALNPWQRTLHDELFGTADFVIPTPALVKEGDLAPYQELVYLTEPTLEEQAWITTHRARFADLMLALVDQRLGSMSLAAWLRTRIVDRSTRAGNQIAWSTFERAEPDLARSALRFAYDGLIPLPDGARLREQHRVPPDAQDWVNVLTDFSLGHLQQSPDPRDGQALTAIKRVLPGLGYRLTSNGVRVATSPVDRVCALSESKIAATAHILDTEHAVLGARMRALVLCDFESMTGTLPTSEAPVSDQSGSAQLVTAMLAASDLRRRVPLHALLVTGQTFACPAAIEADLSAFCADRGAPVITEPFDPHPGLRVVRGNGSFTPRTWVALATAYFLAGRARVLVGTRALLGEGWDCPAVNVTIDLTSATTQAAITQMRGRAIRQDPRDGDKVADNWSVCCFTTEHPRGDADYLRLVRKHDGYYAASPQGLIESGVTHCDPSLSPYRPPATDAPAITARALQRVAEREQARARWRIGEPYDGIDVVTIRVRSRQPLGIAAPRIAASALTPPVPGRLSPVRLARGAVAALSLIGAGAGATAAVAGLGPLAGATTAGSVLTAGAGLLATAAVAESRRLRQAPNALEQLAAVVADALKAAGGAEKGSEALRISSDPDGWIRCELGGVPTEQSLRFSAALDELLAPLAEPRYLIGRKILTPPTARVARALFAARAVIGLPLPGAVAWHAVPQWFARRKDRRQCLLQCWRRHIGPPRQLPADSPEGLAILDLFRGDNPLSVTTQLRTTWR
>NZ_AP022575.1|WP_083050755.1|422832_423081_+|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MDVVGLRELRQNASDLVRRAEDGEEITITVAGRPGARLVPAAPRTWRRWVDVAELFAGSADPAWDGDRAALENDVRDPWAMT
>NZ_AP022575.1|WP_083050730.1|423077_423458_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MKAILDTSVVIATDIAHLEGELAISAITLAELHFGVLVAKQQKVRAERLRRLLLLQRTFDALPLDEAVAASYGQLAAAVVDAGRQPRARSMDLLIAATAHAHSARLYTRNADDFDGLADLVDVVAV
>NZ_AP022575.1|WP_083050733.1|423801_424605_-|sulfotransferase
MADRPRAYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPATSQAPQPREWFAGVEDESILRLLDPLDEGKPDLAPAEIWRDYIRTVGRTPNGVWGGKLMWNQTPLLRNRARELPNSSGDGLLAAIRDVVGEDPLLVYVYRPDVVSQAVSFWRAVQTRVWRGRPEPARDARAVYHAGAIAHIVTMLRGQEQGWRNWFAEEAIKPMEVAYPVLWRNLTQVVASILEELGLDPRLAPQPVLERQADQRSDEWVDRYRADAEREGLPT
>NZ_AP022575.1|WP_083050736.1|424679_425075_-|PIN-domain-containing-protein
MRIHLDTNLLVQQPRWELLPPGDHRLFISAIAFAEFSEGTTHPDEQIAARARIALVQLRSTFGEGLPFTQREADIYRELCTTVATAGRVPGGRRRVDLMIAAIAVADRAALATRNAHDFTGLEPILQIIAL

Crispr_ID: NZ_AP022575_6

• CRISPR_ID: NZ_AP022575_6
• CRISPR_location: 1035122-1035803
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 12 spacers
• Cas_protein_info: RT

Consensus repeat of NZ_AP022575_6

Consensus_repeat	Method
TGCCGGTGTTGCCGAAGCCGATGTT	CRISPRCasFinder

spacers of NZ_AP022575_6

>6.1|1035147|20|NZ_AP022575|CRISPRCasFinder
CACGGTGCCGGTGTTTCCCC
>6.2|1035192|50|NZ_AP022575|CRISPRCasFinder
GAAGCCGCCGGTGTTGGAGCTGCCAGTGTTCCAACTACCCGTGTTGAAGC
>6.3|1035267|20|NZ_AP022575|CRISPRCasFinder
GTAATTGCCGGTGTTGCCGA
>6.4|1035312|20|NZ_AP022575|CRISPRCasFinder
AAACAATCCGGTGTTTGCCT
>6.5|1035357|23|NZ_AP022575|CRISPRCasFinder
GTAGCTGGTGCCCGAGTTTCCGA
>6.6|1035405|20|NZ_AP022575|CRISPRCasFinder
GCCGATTCCGATATTTCCGG
>6.7|1035450|41|NZ_AP022575|CRISPRCasFinder
GCCGGTGCCCGAGTTCAGGCCGCCGAGCCCCTGCTGGTTGT
>6.8|1035516|35|NZ_AP022575|CRISPRCasFinder
TCCGTTGCCGGTGTTGCCGAAGCCGATGTTTCCGT
>6.9|1035576|53|NZ_AP022575|CRISPRCasFinder
GTTGCTGCCGGTGTTGCCGAAGCCGAAGTTGCTGAGGGCTGCCGTCAGTCCGG
>6.10|1035654|35|NZ_AP022575|CRISPRCasFinder
ATTGCTGCCGAGGTTTCCAAAGCCGACGTTATTGC
>6.11|1035714|20|NZ_AP022575|CRISPRCasFinder
GAAGCTGCCGAGGTTTCCGC
>6.12|1035759|20|NZ_AP022575|CRISPRCasFinder
TCCGCCGCCCAGGCTGAAAC

CRISPR arrays and Neighbor proteins around NZ_AP022575_6

CRISPR arrays

The CRISPR arrays of NZ_AP022575_6

>merge|NZ_AP022575|6|1035122-1035803|CRISPRCasFinder
TCCCGGTGTTGAATGCCCCGGTGTTCACGGTGCCGGTGTTTCCCCAGCCGGTGTTGAGGTTGCCGGGGTTGAAGCCGCCGGTGTTGGAGCTGCCAGTGTTCCAACTACCCGTGTTGAAGCTGCCCTGGTTGAAGTTGCCGGTGTTGTAATTGCCGGTGTTGCCGATGCCCGTGTTGGCAATGCCAACATTAAACAATCCGGTGTTTGCCTCGCCCGAGTTGCCGATTCCCGTGTTGTAGCTGGTGCCCGAGTTTCCGATGCCGAAGTTTCCGGTGCCCGAGTTGCCGATTCCGATATTTCCGGTGCCGGAGTTGAACAAACCGATATTGCCGGTGCCCGAGTTCAGGCCGCCGAGCCCCTGCTGGTTGTTGCCGGTGAGCCCGATGCCGATGTTTCCGTTGCCGGTGTTGCCGAAGCCGATGTTTCCGTTACCAGAGTTCCCGAAACCAATGTTGTTGCTGCCGGTGTTGCCGAAGCCGAAGTTGCTGAGGGCTGCCGTCAGTCCGGGCCCGACGTTTCCGAAGCCGACGTTATTGCTGCCGAGGTTTCCAAAGCCGACGTTATTGCCGCCGAGGTTTCCGCTGCCAATGTTGAAGCTGCCGAGGTTTCCGCTCCCGATGTTGTAGTTGCCGACGTTTCCGCCGCCCAGGCTGAAACTGCCGAGGTTGCCGTTGCCCACGTT

>NZ_AP022575|6|3|1035122-1035803|CRISPRCasFinder
TCCCGGTGTTGAATGCCCCGGTGTT	CACGGTGCCGGTGTTTCCCC
AGCCGGTGTTGAGGTTGCCGGGGTT	GAAGCCGCCGGTGTTGGAGCTGCCAGTGTTCCAACTACCCGTGTTGAAGC
TGCCCTGGTTGAAGTTGCCGGTGTT	GTAATTGCCGGTGTTGCCGA
TGCCCGTGTTGGCAATGCCAACATT	AAACAATCCGGTGTTTGCCT
CGCCCGAGTTGCCGATTCCCGTGTT	GTAGCTGGTGCCCGAGTTTCCGA
TGCCGAAGTTTCCGGTGCCCGAGTT	GCCGATTCCGATATTTCCGG
TGCCGGAGTTGAACAAACCGATATT	GCCGGTGCCCGAGTTCAGGCCGCCGAGCCCCTGCTGGTTGT
TGCCGGTGAGCCCGATGCCGATGTT	TCCGTTGCCGGTGTTGCCGAAGCCGATGTTTCCGT
TACCAGAGTTCCCGAAACCAATGTT	GTTGCTGCCGGTGTTGCCGAAGCCGAAGTTGCTGAGGGCTGCCGTCAGTCCGG
GCCCGACGTTTCCGAAGCCGACGTT	ATTGCTGCCGAGGTTTCCAAAGCCGACGTTATTGC
CGCCGAGGTTTCCGCTGCCAATGTT	GAAGCTGCCGAGGTTTCCGC
TCCCGATGTTGTAGTTGCCGACGTT	TCCGCCGCCCAGGCTGAAAC
TGCCGAGGTTGCCGTTGCCCACGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083052515.1|1030753_1030963_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl|CDD|378324
NZ_AP022575.1|WP_083052516.1|1030334_1030766_-|PIN-domain-nuclease	unknown	unknown	gnl|CDD|350322
NZ_AP022575.1|WP_083051239.1|1020536_1021991_+|amino-acid-permease	unknown	unknown	gnl|CDD|129987
NZ_AP022575.1|WP_083049448.1|1044939_1045419_-|MPT63-family-protein	unknown	unknown	gnl|CDD|370335
NZ_AP022575.1|WP_163662821.1|1024977_1026345_+|DUF222-domain-containing-protein	unknown	unknown	gnl|CDD|367155
NZ_AP022575.1|WP_163662827.1|1040803_1042177_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NZ_AP022575.1|WP_083052590.1|1038883_1040167_+|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NZ_AP022575.1|WP_083049457.1|1047582_1048674_-|acyl-CoA/acyl-ACP-dehydrogenase	unknown	unknown	gnl|CDD|224871
NZ_AP022575.1|WP_083051194.1|1023533_1024538_-|zinc-binding-dehydrogenase	unknown	unknown	gnl|CDD|176236
NZ_AP022575.1|WP_083049446.1|1042904_1044782_+|AMP-binding-protein	unknown	unknown	gnl|CDD|171527
NZ_AP022575.1|WP_083049451.1|1045572_1046346_+|DUF2071-domain-containing-protein	unknown	unknown	gnl|CDD|225897
NZ_AP022575.1|WP_083052594.1|1036928_1037396_-|SRPBCC-family-protein	unknown	unknown	gnl|CDD|176863
NZ_AP022575.1|WP_083052518.1|1027565_1027775_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083052517.1|1028010_1030311_+|isocitrate-lyase-family-protein	unknown	unknown	gnl|CDD|215482
NZ_AP022575.1|WP_158084766.1|1047023_1047200_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083052592.1|1037450_1038347_+|acyltransferase-family-protein	unknown	unknown	gnl|CDD|153249
NZ_AP022575.1|WP_083052526.1|1026290_1026782_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083049454.1|1046488_1046986_+|thiol-peroxidase	unknown	unknown	gnl|CDD|179055
NZ_AP022575.1|WP_083051197.1|1022940_1023537_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl|CDD|224793
NZ_AP022575.1|WP_083051199.1|1021987_1022866_+|universal-stress-protein	unknown	unknown	gnl|CDD|366180

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP022575.1|WP_163662827.1|1040803_1042177_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	6.3e-46	151.4	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083052515.1|1030753_1030963_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl|CDD|378324	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB. VapB is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is VapC, pfam05016. The family contains several related antitoxins from Cyanobacteria and Actinobacterial families. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the Toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all antitoxins.	0.00462721
NZ_AP022575.1|WP_083052516.1|1030334_1030766_-|PIN-domain-nuclease	gnl|CDD|350322	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC3 and VapC21 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	8.99893e-61
NZ_AP022575.1|WP_083051239.1|1020536_1021991_+|amino-acid-permease	gnl|CDD|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	9.63905e-126
NZ_AP022575.1|WP_083049448.1|1044939_1045419_-|MPT63-family-protein	gnl|CDD|370335	pfam09167, DUF1942, Domain of unknown function (DUF1942). Members of this family of bacterial proteins assume a beta-sandwich structure consisting of two antiparallel beta-sheets similar to an immunoglobulin-like fold, with an additional small, antiparallel beta-sheet. The longer-stranded beta-sheet is made up of four antiparallel beta-strands. The shorter-stranded beta-sheet consists of five beta-strands, four of these beta-strands form an antiparallel beta-sheet. The exact function of this family of proteins is unknown, though a putative role includes involvement in host-bacterial interactions involved in endocytosis or phagocytosis, possibly during bacterial internalisation.	1.85058e-57
NZ_AP022575.1|WP_163662821.1|1024977_1026345_+|DUF222-domain-containing-protein	gnl|CDD|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	7.87368e-100
NZ_AP022575.1|WP_163662827.1|1040803_1042177_+|group-II-intron-reverse-transcriptase/maturase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.07772e-168
NZ_AP022575.1|WP_083052594.1|1036928_1037396_-|SRPBCC-family-protein	gnl|CDD|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	5.95619e-22
NZ_AP022575.1|WP_083051194.1|1023533_1024538_-|zinc-binding-dehydrogenase	gnl|CDD|176236	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.06209e-143
NZ_AP022575.1|WP_083049446.1|1042904_1044782_+|AMP-binding-protein	gnl|CDD|171527	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional.	0
NZ_AP022575.1|WP_083049451.1|1045572_1046346_+|DUF2071-domain-containing-protein	gnl|CDD|225897	COG3361, COG3361, Uncharacterized conserved protein [Function unknown].	4.37301e-98
NZ_AP022575.1|WP_083052590.1|1038883_1040167_+|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.92581e-51
NZ_AP022575.1|WP_083052517.1|1028010_1030311_+|isocitrate-lyase-family-protein	gnl|CDD|215482	PLN02892, PLN02892, isocitrate lyase.	2.44411e-147
NZ_AP022575.1|WP_083052592.1|1037450_1038347_+|acyltransferase-family-protein	gnl|CDD|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	5.39521e-63
NZ_AP022575.1|WP_083049457.1|1047582_1048674_-|acyl-CoA/acyl-ACP-dehydrogenase	gnl|CDD|224871	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism].	1.86573e-61
NZ_AP022575.1|WP_083049454.1|1046488_1046986_+|thiol-peroxidase	gnl|CDD|179055	PRK00522, tpx, thiol peroxidase.	1.91747e-96
NZ_AP022575.1|WP_083051197.1|1022940_1023537_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl|CDD|224793	COG1881, COG1881, Phospholipid-binding protein [General function prediction only].	2.40656e-45
NZ_AP022575.1|WP_083051199.1|1021987_1022866_+|universal-stress-protein	gnl|CDD|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	6.1524e-14

Protein sequences

>NZ_AP022575.1|WP_083052515.1|1030753_1030963_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MTRTLIDTNDELLKRAQAVLGTVTKKDTVNAALAQVVALAARRQFLDDARRGELADAVDEVMTDRAWRR
>NZ_AP022575.1|WP_083052516.1|1030334_1030766_-|PIN-domain-nuclease
MAAVARYLADTSALARLNRPAVDAALSPLIETGQVATCGMVELEVLYSARNPADYARRQQQLRDGFERLAMPDEVWQRALEVQAALARKSAHRGAALPDLLIAATAERHGVTVLHYDHEYELIAAVTEQSVRWIVPSGTADGT
>NZ_AP022575.1|WP_083052517.1|1028010_1030311_+|isocitrate-lyase-family-protein
MAIAETDTGVSAPFEHDFEKAVAATQHYFDSPRFSGITRLYTARQVVEQRGTIPTDYTVARDAATAFYQRLRELFAARKSITTFGPYSPGQAVSMKRMGIEAIYLGGWATSAKGSTTEDPGPDLASYPLSQVPDDAAVLVRALLTADRNQEYLRLRMSERQRAATPAYDFRPFIIADADTGHGGDPHVRNLIRRFVEVGVPGYHIEDQRPGTKKCGHQGGKVLVPSDEQIKRLNAARFQLDIMRVPGIIVARTDAEAANLIDSRADERDQPFLLGATNLNVPSYKSCFLAMLRRFDELGVKELNGHLLYALGDDEYAMANAWLERQGIMGLVSETVTAWRDNGQRSIDDLFDQVESRFVAAWEDDAGLMTYGEAVADVLEFGESEGEPVGMRPEEWRAFAASASLYAARAKAKELGVDPPWDCELAKTPEGYYQIRGGIPYAIAKSLAAAPFADILWMETKTADLADARQFAEAIHAEFPDQMLAYNLSPSFNWDTTGMTDEEMRHFPEELGKMGFVFNFITYGGHQIDGVAAEEFATALRQDGMLALARLQRKMRLVESPYRTPQTLVGGPRSDAALAASSGRTATTKAMGKGSTQHQHLVQTEVPRKLLEEWLAMWSGHYQLKDKLRVQLRPQRAGSEVLELGIYGDGEQKLANVIFQPIQDRRGRTILLVRDQNTFGEELRQKRLMTLIHLWLVHRFKADAVHYVTPTADNLYQTSKMKSHGIFSEVNQEVGEIIVAEVNHPRIAELLTPDRVALRKLIAKEG
>NZ_AP022575.1|WP_083052518.1|1027565_1027775_-|hypothetical-protein
MAKSERKILAALAKPDAARRFAADPFATLTGLRIEVPPIIKQRLKAASLTGDAPTCIGRGPSGCRTAKW
>NZ_AP022575.1|WP_083052526.1|1026290_1026782_-|hypothetical-protein
MTAFEKIRTLSPLDRRIGTFVGTVVHPMRRQGRFDAGTSGQQGLGGGAVAHYQITGTSLLLTIDATGPVEMLLSVTVVDEAAHAASAQRCVHYEPPCSRHGRLTPTLVGLPQRLVDELRCRRGRDARTRHQVNGCQSMSGRSSGDFYGPSSSSSSCRSFSGWK
>NZ_AP022575.1|WP_163662821.1|1024977_1026345_+|DUF222-domain-containing-protein
MHSSSREEVVAVFDALDTALGRALELSIEVLTTGECLAMLERCETLRRRLPAVEHPFINRLADQADPSELGGKLPFALAERLRITRGEAARRIGEAAELGPRRALTGQPLPPLLPATAEAQRAGRLGPDHVRIIRAFLHQLPSGVDLPTREKAEAELAQLGGRFRPDQLHKLAAKLADCLNPDGNYRDTDRARRRGIILGKQGADGMSAITGYLTPEARATLDAVLAKLAAPGMANPADPTPCVSGTPSQAAIEADTRSAAQRNHDGLQAGLRALLCSGELGQHNGLPAAIIVSTSLAELQSAAGHALTGGGSLLPMSEVIRLAAHAHHYLRIFDHGRELALYHTKRLASPAQRIVLYAKDRGCSFPNCDVPGYLTEVHHVTDYSECRETDINNLTQACGPHHQLATTGGWATRKHRDGTTEWLPPAHLDHAQPRTNNYFHPEKLLHDEEDEDGP
>NZ_AP022575.1|WP_083051194.1|1023533_1024538_-|zinc-binding-dehydrogenase
MRAVVITKHGDSSVLQVQQRPDPPPPGPGQLRVVVHAAGVNFADHLARVGLYPDAPKLPAVVGYEVAGTVEAVGDSVDPNRVGQRVLAGTRFGGYSEMVNVAATDAAVLPDTMSFEQGAAVPVNYATAWAALHGYGSLRTGERVLVHAAAGGVGIAAIQFAKAAGAEVHGTASPGKHQRLAELGVDRAIDYRRDGWWQGLGRYDLVLDPLGGTSLRRSYHLLRPGGRLVGYGISNMQQGERRSLRRVAPHALFMVRGFNLMKQLEESKAVIGLNMLRLWDDRGTLEPWITPLTQALDDGTISPIVHAAVPFADAPRAHQILAGRENFGKVVLVP
>NZ_AP022575.1|WP_083051197.1|1022940_1023537_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MILHSNIVAVAGLAFLAALAGCGGDGGGPERLPYGPKATTVRGTTPAPATESLTISSPAFSDGAPIPAQYSCKGANVAPPLTWTAPSGAAELALVVDDPDAVGGLYVHWIVTGIAPGPGATADGQTPDGGHSLPNSGGRQGYFGPCPPEGTGTHHYRFTLYQLPAAFRLPPGSTGVQAAQAIAEAATTQARLTGTFAG
>NZ_AP022575.1|WP_083051199.1|1021987_1022866_+|universal-stress-protein
MTVVVGYLAGRVGPSALHLGVRAARTLKTALIVATIVPKAWPTPSMARVDAEYQQWADRLAADSADEAQRYLQTLADGVEVSYHHSAHRSVSGGLIELVSEVNADMLVLGSFPGGRRARVLIGSTADWLLHSSPVPVAVSPRQYRSHATRLTRLTCGYSATSQAVDVVRRCSELANRFGVPLRVITFAARGRTMYPPEVGLHAESWVLESWAAQAWEMLDRLRTDGVVSDDVVLQVVTGNGWQQALDTTDWEDGEILALGTSARGDIARVFLGSHSGKIIRHSPVPVLVLPG
>NZ_AP022575.1|WP_083051239.1|1020536_1021991_+|amino-acid-permease
MPATSTSLKEQLLRRRPVDGAHLVPGGAGSLKRSFGTFQLTMFGVGSTIGTGIFFVLAEAVPEAGPGVIVSFVIAGLAAGLAAICYAELASAVPVSGSSYSYAYATLGEAVAMCVAACLLLEYGVATAAVAVGWSGYVNKLLTNVFGFQLPQALSVAPWDWEPGQQHGYVNLPAVVLIGLCALLLIRGVSESATVNTVMVLIKLAVLGMFVLIALSAYQGDHFKDFAPFGGTGIGAAAGTIFFSFIGLDAVSTAGEEVKNPQQTLPRALIAALFVVTGVYVLVAFAALGTQPWQDFAGQEEAGLATILDNVTHGRWASTVLAAGAVISIFTVTLVTLYGQTRILFAMGRDGLLPAPFAAVNPRTLTPVNNTVIVALVASILAAFVPLGHLADMVSIGTLTAFIVVSVGVIILRVRRPDLPRGFRVPGYPVTPVLSVLACGYLLGSLHWYTWVAFAGWVAVALTYYLVWGRRHSALNEVAHEDMP
>NZ_AP022575.1|WP_083052594.1|1036928_1037396_-|SRPBCC-family-protein
MSGRTFSFQVTRTSTAPAATLFRLVTDGGRWSEWAKPLVVQSGWVRQGDPAPGGVGAIRKLGMWPVFVREETVEYEQDRRHVYKLVGPPTPARDYTGEVVLTPNAAGGTELRWTGSFIEGTRGTGPVMRAALGGAVRLFASRLVKAAERESGGGR
>NZ_AP022575.1|WP_083052592.1|1037450_1038347_+|acyltransferase-family-protein
MRTARSGAPVKATPCGRRRGHTHDVPNADPASVPPTPTQADVAAALRVMKPLRKLIKPKVYGIDNVPTKRALLVGNHNTLGLVDAPLLAAELWERGRMVRSLGDHAHFKIPGWRDALTQLGVVEGTREIASELMRRGELVMVFPGGGREVNKRKNERYKLVWKNRLGFARLAIKHGYPIVPFASVGAEHGIDILLDNESPLMAPVQFLAEKLLGTPDGPPLVRGIGLTPVPRPERQYYWFGEPIGTTEFTGRDDDDNAARKVRERAAAAIEEGIQLMLAERDADPNRSVVGRLLRPDA
>NZ_AP022575.1|WP_083052590.1|1038883_1040167_+|serine-hydrolase
MARPSVLTADHGLPPGVQGACDSRFAGVIRAFAGLYPGRMFGGGALAVYIDGRQVVDVWTGWSDRRGTVPWTADTGAMVFSATKGLAATVIHRLVDRGLLSYDAPVADYWPAFGANGKSEITVSDVLRHRSGLSHLKGVGKKEVMDHLLMEEKLAAAPLDRTHGQMAYHAVTYGWLLSGLARAVTGKGMRQLFRDELARPLDTDGLHLGRPPADAPTKVAQTLLPQTKIPTPLLDFIAPKVAGLSFSGLLGAVYFPGIMSMLQGDMPFLDGEIPAVNGVVTARALAKVYAALANDGVIDGTRLLSSGAVRGLMGKSELWPDLNLGLPFTYHQGYQSSPVPGLLEGYGHIGLGGTIGWADPETGSAFGYVHNRLLTLLLFDVGSFAGLAPLLTGAVVAARKADPLEVPHFGAPYYEPGQRRTASAQAT
>NZ_AP022575.1|WP_163662827.1|1040803_1042177_+|group-II-intron-reverse-transcriptase/maturase
MTGFARSNSPGKPSLAVADEEPLVVSPVKVRQLQRALWAAAKQSEGRRFHALYDRICRGDVLWEAWERVRKNKGAAGVDRITLVAVEDYGVDRMLCELRCDLRTGRYRPAPARRVEIPKPQGGLRPLGIPTVRDRVVQAAAKIVLEPIFEADFLSCSYGFRPRRSATMAKERLRTGFIEGYQFVVEFDIANFFGEIDHERLLAEVGRRVSDRRVLKLLRLWLQAGVMVEGVIQRTVAGTPQGGVISPLLANIYLHLLDTALAARGVGELVRYADDGVVLCRSAAQAEHALAAVGEILASLGLRLHPDKTKVVDLREGRDGLDFLGCHFRARMSGRLWEQRRIVRYYLQRWLSQRAMVRLRAKVGDRTGRNRVGLDIRDVIAELNPILRGWGNYFRTGNAAQKFGQIDRYVVRRLFRLMVKKRGRNLCAGQADQWTEAWFNGHGLHRLRGTIRYPKAA
>NZ_AP022575.1|WP_083049446.1|1042904_1044782_+|AMP-binding-protein
MDYGSRRDSAAPQGLLEIEDCLDADGGIALPPDATLISLIERNVANVGDSVAYRYLDHTRSADGHALEVTWSQFGVRLRAIGAHVQRFAGPGDRVAILAPQGIDYVAGHYAAIKAGTIAVPLFAPELPGHAERLDTALRDSKPAVVLTTTAAQDAVEAFLHHRADLHGTRVLVIDQIPDTAAELFAPVELDLDAVCHLQYTSGATRPPVGVEITHRAVGTNLVQMILSIDLLNRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPLRWIQALSAGSRTGRVVTAAPNFAYEWAAQRGLPSHGDDIDLSNVVLIIGSEPVSIDAITTFNKAFAPHGLPRTAFKPSYGIAEATLMVATIDHAAEPTVAYLDRERLGAGRAVRVAADDPNAVLQVSCGQVARSLWAVIVDPDAGTELRDGEVGEVWLQGDNVGRGYWGRPDQTRRTFGARLRSLLAEGSHADGATIDGTWLRTGDLGVYLDGELYITGRIADLVTIDGRNHYPQDIEATAAEASPTVRRGYVTAFAVPAAGGGSQQLVIIAERAAGTSRADPQPVIAAIQAAIWNRHGLHVADVRLLPAGAIPRTTSGKLARLACRAQYLDGAWGHTGRQDDRPTTRT
>NZ_AP022575.1|WP_083049448.1|1044939_1045419_-|MPT63-family-protein
MKITTTIKTAVAVGAMASAAAIAAPIAFAGYPIAGKLGSELTMTDSVGQVVLSWKVSDLKSSTDTIPGYPVAGQVWEATATVNAIRGAVTPAISQFNARTDSGINYRVLWQAATVDGISGATIPQGAQSSGKIYFDVTGPAPTIVAMNNGMEDLLIWGP
>NZ_AP022575.1|WP_083049451.1|1045572_1046346_+|DUF2071-domain-containing-protein
MTAISGTSPTEPGDISALAGYPVTAPPLPRPVTFDQCWRDLTFVHWPVRPERIEGMYPPGTRPDVFADGMTYVGLVPFAMHRTKLGTSLPLPYFGSFLETNIRLYSIDDAGRHGVVFRSLETARLAVVPVTRIGLGVPYTWAKMRMTQSGEQITYHSVRRWPRRGLRSRLTISVGDAVEPTPLEVWLTARWGAHTRKAGRTWWIPNEHETWPMRLAEIVELDDELLGASGVQPAGDRLRALFSPGVRTRFGRPCPVR
>NZ_AP022575.1|WP_083049454.1|1046488_1046986_+|thiol-peroxidase
MAQITLRGNAINTVGELPAVGSPAPDFTLTGGDLGAISRDQFRGKPVLLNIFPSVDTPVCATSVRTFDQRAAASGATVLCVSKDLPFAQKRFCGAEATDNVTVASAFRSGFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIGQEPNYEAALAALRE
>NZ_AP022575.1|WP_158084766.1|1047023_1047200_-|hypothetical-protein
MNARNNMTKLAMRVLGGVLAVLAASLIAGCADYHPLPDGRTPLGMGTAAVAPPEFANE
>NZ_AP022575.1|WP_083049457.1|1047582_1048674_-|acyl-CoA/acyl-ACP-dehydrogenase
MDFQYSTEQDAFRASLRGFLHDQAPPARVREMAGAGGPDRRLWQRICTELELPALHVPPERGGVGATLVETAIAFSELGRALTPIPFAATVFAIEAILRMGDDEQSKSLLAGLLTGEQIGTLAVSGHDVASATSVRAVRRDGRPALTGECTPVLHGHLADLFVVPAVVDGSIVPHVVAADAPGVTVRRLPSFDLTRPVATLQLARSPAEALTAGTPDDMERVLDVARVLLAAEMLGGAEACLDLAVQYAGRRTQFDRPIGSFQAVKHACADMMIEIDATQATVMFAAMSAADDDELAITAPLAKAQAADTFTLCAGSAIQVHGGIAFAWEHDLHLYYRRAKTSEALFGSSARHRALLADRAGL

Crispr_ID: NZ_AP022575_7

• CRISPR_ID: NZ_AP022575_7
• CRISPR_location: 1338328-1338429
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP022575_7

Consensus_repeat	Method
TGGTGCAGGCGGAGGCCTCCGATC	CRISPRCasFinder

spacers of NZ_AP022575_7

>7.1|1338352|54|NZ_AP022575|CRISPRCasFinder
TGAGCCGTACGTTAATGCTGCCGGTGAGATCTCTGGCACGTCGTCAGCCGCCGG

CRISPR arrays and Neighbor proteins around NZ_AP022575_7

CRISPR arrays

The CRISPR arrays of NZ_AP022575_7

>merge|NZ_AP022575|7|1338328-1338429|CRISPRCasFinder
TGGTGCAGGCGGAGGCCTCCGATCTGAGCCGTACGTTAATGCTGCCGGTGAGATCTCTGGCACGTCGTCAGCCGCCGGTGGTGCAGGCGGAGGACTCCGATC

>NZ_AP022575|7|4|1338328-1338429|CRISPRCasFinder
TGGTGCAGGCGGAGGCCTCCGATC	TGAGCCGTACGTTAATGCTGCCGGTGAGATCTCTGGCACGTCGTCAGCCGCCGG
TGGTGCAGGCGGAGGACTCCGATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_142272102.1|1346859_1348137_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|369778
NZ_AP022575.1|WP_083049928.1|1332645_1334613_-|hypothetical-protein	unknown	unknown	gnl|CDD|283837
NZ_AP022575.1|WP_083049935.1|1329989_1331114_+|aminopeptidase-P-family-protein	unknown	unknown	gnl|CDD|223085
NZ_AP022575.1|WP_083049926.1|1334594_1334909_-|DUF2563-family-protein	unknown	unknown	gnl|CDD|287754
NZ_AP022575.1|WP_083049930.1|1332107_1332665_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083049921.1|1335946_1336909_-|hypothetical-protein	unknown	unknown	gnl|CDD|185616
NZ_AP022575.1|WP_158084773.1|1342970_1343126_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083049911.1|1344693_1345443_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|235527
NZ_AP022575.1|WP_083049968.1|1345938_1346787_+|class-A-beta-lactamase	unknown	unknown	gnl|CDD|225242
NZ_AP022575.1|WP_083049939.1|1327986_1328754_+|DUF4333-domain-containing-protein	unknown	unknown	gnl|CDD|379513
NZ_AP022575.1|WP_083049913.1|1343253_1344609_+|RNA-polymerase-sigma-factor-SigC	unknown	unknown	gnl|CDD|137458
NZ_AP022575.1|WP_083049974.1|1340283_1340625_+|glycohydrolase-toxin-TNT-related-protein	unknown	unknown	gnl|CDD|379424
NZ_AP022575.1|WP_083049941.1|1325223_1327935_+|RNA-helicase	unknown	unknown	gnl|CDD|226947
NZ_AP022575.1|WP_083049933.1|1331288_1331777_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083049917.1|1339051_1339591_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_163663212.1|1328757_1329933_-|5'-3'-exonuclease	unknown	unknown	gnl|CDD|214682
NZ_AP022575.1|WP_170300376.1|1339638_1339908_-|DUF5631-domain-containing-protein	unknown	unknown	gnl|CDD|376071
NZ_AP022575.1|WP_083049915.1|1341467_1342946_+|hypothetical-protein	unknown	unknown	gnl|CDD|176532
NZ_AP022575.1|WP_083049923.1|1334958_1335954_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_142272098.1|1345472_1345892_+|F420-dependent-biliverdin-reductase	unknown	unknown	gnl|CDD|274679

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083049928.1|1332645_1334613_-|hypothetical-protein	gnl|CDD|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	4.63081e-22
NZ_AP022575.1|WP_083049935.1|1329989_1331114_+|aminopeptidase-P-family-protein	gnl|CDD|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	4.35277e-107
NZ_AP022575.1|WP_083049926.1|1334594_1334909_-|DUF2563-family-protein	gnl|CDD|287754	pfam10817, DUF2563, Protein of unknown function (DUF2563). This family of proteins with unknown function appears to be restricted to Mycobacterium.	1.67597e-43
NZ_AP022575.1|WP_083049921.1|1335946_1336909_-|hypothetical-protein	gnl|CDD|185616	PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional.	0.000245082
NZ_AP022575.1|WP_083049911.1|1344693_1345443_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|235527	PRK05599, PRK05599, SDR family oxidoreductase.	1.78761e-86
NZ_AP022575.1|WP_083049968.1|1345938_1346787_+|class-A-beta-lactamase	gnl|CDD|225242	COG2367, PenP, Beta-lactamase class A [Defense mechanisms].	5.48249e-58
NZ_AP022575.1|WP_083049915.1|1341467_1342946_+|hypothetical-protein	gnl|CDD|176532	cd08590, PI-PLCc_Rv2075c_like, Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.	3.03082e-81
NZ_AP022575.1|WP_083049913.1|1343253_1344609_+|RNA-polymerase-sigma-factor-SigC	gnl|CDD|137458	PRK09649, PRK09649, RNA polymerase sigma factor SigC; Reviewed.	1.80693e-97
NZ_AP022575.1|WP_083049974.1|1340283_1340625_+|glycohydrolase-toxin-TNT-related-protein	gnl|CDD|379424	pfam14021, TNT, Tuberculosis necrotizing toxin. This is the C-terminal domain secreted by Mycobacterium tuberculosis (Mtb). It induces necrosis of infected cells to evade immune responses. Mtb utilizes the protein CpnT to kill human macrophages by secreting its C-terminal domain (CTD), named tuberculosis necrotizing toxin (TNT) that induces necrosis. It acts as a NAD+ glycohydrolase which hydrolyzes the essential cellular coenzyme NAD+ in the cytosol of infected macrophages resulting in necrotic cell death. CpnT transports its toxic CTD from the cell surface of M. tuberculosis by proteolytic cleavage, where the toxin is cleaved to induce host cell death. Structural analysis determined that the TNT core contains only six beta-strands as opposed to seven found in all known NAD+-utilizing toxins, and is significantly smaller, with only two short alpha-helices and two 3/10 helices. Furthermore, the putative NAD+ binding pocket identified Q822, Y765 and R757 as residues possibly involved in NAD+-binding and hydrolysis based on similar positions of catalytic amino acids of ADP-ribosylating toxins. While glutamine 822 residue was detected to be highly conserved among TNT homologs.	1.37794e-09
NZ_AP022575.1|WP_170300376.1|1339638_1339908_-|DUF5631-domain-containing-protein	gnl|CDD|376071	pfam18645, DUF5631, Family of unknown function (DUF5631). This is an alpha helical domain found at the C-terminal region of the hypothetical protein Rv3899c from Mycobacterium tuberculosis which is conserved across mycobacteria.	5.77816e-24
NZ_AP022575.1|WP_142272098.1|1345472_1345892_+|F420-dependent-biliverdin-reductase	gnl|CDD|274679	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomyces, make F420. The Partial Phylogenetic Profiling algorithm identifies this members of this protein family as high-scoring proteins to the F420 biosynthesis profile. A member of this family, Rv1155, was crytallized after expression in Escherichia coli, which does not synthesize F420; the crystal structure shown to resemble FMN-binding proteins, but with a recognizable empty cleft corresponding to, yet differing profounding from, the FMN site of pyridoxine 5'-phosphate oxidase. We propose that this protein family consists of F420-binding enzymes. [Unknown function, Enzymes of unknown specificity].	1.56901e-28
NZ_AP022575.1|WP_163663212.1|1328757_1329933_-|5'-3'-exonuclease	gnl|CDD|214682	smart00475, 53EXOc, 5'-3' exonuclease.	8.86331e-94
NZ_AP022575.1|WP_083049939.1|1327986_1328754_+|DUF4333-domain-containing-protein	gnl|CDD|379513	pfam14230, DUF4333, Domain of unknown function (DUF4333). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 140 and 255 amino acids in length. There are two completely conserved C residues that may be functionally important.	1.72812e-22
NZ_AP022575.1|WP_083049941.1|1325223_1327935_+|RNA-helicase	gnl|CDD|226947	COG4581, COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair].	0
NZ_AP022575.1|WP_142272102.1|1346859_1348137_+|methyltransferase-domain-containing-protein	gnl|CDD|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.22874e-13

Protein sequences

>NZ_AP022575.1|WP_083049921.1|1335946_1336909_-|hypothetical-protein
MTIQVFPEDYGAAAGRPGPVPLAPGPVHPGGTSPVEVLMSLFGLSTNADLGDTNADIEGDDADRRAHAADAARKFPANEADAAQQMQGVGAQGMAQMIPQMASGIGGALSGAAGGLMGPLTQLPQQAMQAGQGAMQPLMGALQQARGADGLEAADAAQLADSVEPEPGLGGGAAGGAGGGGIGSGGAGGTAPTGYLGPPPVPMSSPPTTPAGAPARSASVPPTGGAPPASAPAGMAGVPMVPPGAMGAGGEGSKDKPVEKRVTAPAVPNGQPVKGRLTVPPSTPVTKPGEGKPVVRRRILLPEHKGFGRIAPDEKTDRGE
>NZ_AP022575.1|WP_083049923.1|1334958_1335954_-|hypothetical-protein
MSDDSSSAFDLICAEVERQLRGGEALMDAPAASELLRTVRYQLDAQPRPRVIAHGPLYQAVTAARAQVYGRLMQLRHTRCEVLDERWQLRPTGQRDVRALLIDVLNVLLAASTAASVERAYACAERQAMAAAVVAEICGDAAGVEMQRHAVDRAASDAIDALARGTGATTYADCVPPVDVIRADVTRRVRGEVSTDVVAAGHLVMAARHLLDPMPASELSYGPLLGGVHAARKLVHGRLVQLWRARRALTNGDCDLRDVRTLLVDLDSILLETRTAAAIEQAYTRTEGRAMAAAVVAEIRCDAMGLDAQRDVVQRAAADALHALQALRKLN
>NZ_AP022575.1|WP_083049926.1|1334594_1334909_-|DUF2563-family-protein
MFVDTGLLHSGGEESHRAGEHAQDGVDRLSRGPLLSGMFGEFRAAQTFHDAVGVAHAQQVKGLRAHREALTALGGKAHYAAAGFTDMDDRNAANLRAVRCGSAT
>NZ_AP022575.1|WP_083049928.1|1332645_1334613_-|hypothetical-protein
MRLRYISVPALIAEAGGDPWAINHSLQAGRPAQIADLAEAFRAAGRCTAEANAAFDQARRRFEAAWNRENGEHPINDSAEVQRVTTSLGAQSLQLPKIGVDLENIAAALAEAQRSAAGQIATLEGQLQQVDDRLGEALEWEEDIHLTAVNRSALDALISDLEQHAIDDTASALGQLESIRTGYSGYLQKALATLRTDGYDPAGIQGLDAPQSPAKPAEPIQIPPAGTSAEDVHRWWTSLTPEERQRLVAERPEQIGNLNGVPVSARSDANLAVMTQDLNRVRGIASRYGVPMDDVVGDPTRYGLSTSDITRYRNADQTKQGLDQDAGDPLRPHPVYLFAYDPMAFGGKGRAAIAIGNPDTAKSTAVIVPGTSSSVKGGWLHDNHNDALNLFGQANAADPKNPTAVIAWMGYDAPNDFTDPRISTPMLARIGAHALAQDVNGLWETHLGGGQHVTVLGHSYGSTTVADAFALGGMHANDAVLLGCPGTDLARSAASFHLDGGRVYVGAASTDPISMLGQSDGLSRYVNRDNIGGQLLGLTAGLGTDPAGDGFGSVRFRAEVPNSDGINPHDHSHYYHPRSEALHSMADIASGHGDALASDGMLAQPRHQPSVAIGLPGLGSLDVDIPGTPASVDPEWSRPPGSITDDHVFDAQHHH
>NZ_AP022575.1|WP_083049930.1|1332107_1332665_-|hypothetical-protein
MPNTTTDRRLLLARQALRAAAAVVVLLLGGCALVMHKPHSAGSSNPWDDSAHPLTDDQTMAQVVEPAKQIVAAADLQAVSGGFSFASCNDQGDPPYQGTVRMSFLLRGDPDAYFQHVRAAMIAHGWNDGAPPGQHFHGTTLHKDGVTANMSFFPSDHSYGEVILYGECRNTTDHHGDGRWIDITN
>NZ_AP022575.1|WP_083049933.1|1331288_1331777_+|hypothetical-protein
MPLLTELDVLVDDHSVEPKRRRAGRPKRLTDAEPVWLAVAQVLRGACSQRVLREGMVVLADKGPSGAELQRYCAEELNPLLVRPDRKDEKKRRCANLAGMGQWIQAVYDTRKDQLGLKRHGGRTATGVHRRIAAPLLALAAGIWRNWTINADAKRSLIADDH
>NZ_AP022575.1|WP_083049935.1|1329989_1331114_+|aminopeptidase-P-family-protein
MDARRFDARVYARRLAATRAATVKAGLGGLVITPGYDLRYLIGSRADTFERLTALVLPASGEPTVVVPRLELASLQESAVAELGLRVRDWVDGDNPYRLVTEALGGSPTATAVTDSIPALHLLPLTIMLGVLPVLATNVLRELRMVKEEAEIDALRKAGAAIDRVHARVPELLAPGRTEADVAADIAEAIVAEGHSEVAFVIVGSGPHGADPHHRCSDRALREGDIVVVDIGGTYGPGYHSDCTRTYSIGEPDSDVAQQYSILQRAQRAAFDAVRPGVTAEQVDAAARDVLDQAGLADYFVHRTGHGIGLCVHEEPYIVAGNHLPLAAGMAFSIEPGIYFPGRWGARIEDVVIVTEDGAVSVNNRPRELFVVRA
>NZ_AP022575.1|WP_163663212.1|1328757_1329933_-|5'-3'-exonuclease
MVARLGPRRPGRIIRVPAPRGSTSGDPLHPAPPRLRSPRGSTSGDPLHPAPPRLRSPRGSTSGDPLHPAPPRLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSLAVVITQQRPTRLAVCLDLDWRPQFRVNLISSYKAHRVAEAEPADQPDIEQVPDELTPQVEMIVQLLDAFGIPTAGAPGFEADDVLGTLAARERADPVVVVSGDRDLLQVVADDPVPVRVFYLGRGLSKARLFGPAEVAERFGVPVERAGPAYAELALLRGDPSDGLPGVPGIGEKTAAALLAHHGSLEQIMAAAGDPKSAMAKGLRTKLLAGSAYIKAADRVVRVATDAPVTLSTPTDNLPLVAADPARTAELAGHYGVTSSITRLHRALDTLPTK
>NZ_AP022575.1|WP_083049939.1|1327986_1328754_+|DUF4333-domain-containing-protein
MSGPQGPREPWQPPGQGADHSSDPTMMGSPWQQPPQDASWQAPAYPPAGYPPYQQPAEPAYPQQYPPSAPGYGQSDFSTQATQIGTPGQFGQYPQPGQYGQPVQYGQPGQPGQYGQPGQPGQYGQPGQYPGQYGPYDQSAKASRRSMALIGGVVGAIALLFAAVIGVLGFWEPGFFVTTKLDVNKANAGVQQILTDETTGYGAKNVKDVKCNNGTDPTVKKGATFECTVSIDGAAKHVTVTFQDDKGTYEVGRPQ
>NZ_AP022575.1|WP_083049941.1|1325223_1327935_+|RNA-helicase
MTDLPELARFTAELPFALDDFQRRACAALERGHGVLVCAPTGAGKTVVGEFAVHLALASGGKCFYTTPLKALSNQKHTDLTTRYGRDRIGLLTGDLSVNANAPVVVMTTEVLRNMLYADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILHLPDEVRVVSLSATVSNAEEFGGWIQTVRGDTTVVVDEHRPVPLWQHILVGKRLFDLFDESHVNPELLRHIAHRREADRMADWQPRRRGSGRPRFYRPPGRPEVIAALDAQGLLPAITFVFSRAGCDAAVNQCLRSPLRLTSEEERAQIAEVIDHRCGDLADSDLAVLGYYEWREGLLRGLAAHHAGMLPAFRHTVEELFAAGLVKAVFATETLALGINMPARTVVLERLVKFNGEQHLPLTAGEYTQLTGRAGRRGIDVEGHAVVIWHPADGSSEPSEVAGLASTRTFPLRSSFAPSYNMTINLVHRMGPEQAHRLLEQSFAQYQADRSVVGLVRGIERGTRMLDEIAAELGGPDAPILDYARLRAKVSDLERSRARASRLHRRQAASDALAALRRGDIITITHGRRGGLAVVLEAARDSADPRPLVLTEHRWAGRISSADYSGALPPVGSMALPKRVEHRQPRVRRDLASALRSAAARLAIPAAGRTRDDTDGAFADPQLAVLRARLRRHPVHNAPGLEAQIRQAERYLRIERDNAQLQKKVAAATNSLAVTFDRIVGLLTEREFIAGPAGDPRVTDDGRLLARIYSESDLLVAECLRTGAWAGLKPAELAAVVSAVLYESRGGDGPGAPVTAEAPTPRLRQALHQTARLCAALRADERTHRIGPSREPDEGFVGVIYRWARTGDLAAALAVADANGGGSLSAGDFVRWCRQVLDLLDQVRNAAPDPELRATAKRAINDVRRGVVAVDAG
>NZ_AP022575.1|WP_083049917.1|1339051_1339591_-|hypothetical-protein
MTSTPPPTTGQWTPTHPPAPPRSRNKLAVALAAVAALLGTAALVVALIALTRPTTNSPITAPGTTSPPTYTAAETAAAHQKLCEVYKLAARSVQIDTHSGNQALAGVSTVNGALMLEQAVNAAPALAAADRAAALTLAEAFTNANAMGSFGTRDDPAWQAVVDDVNAKDARMKAVCDGG
>NZ_AP022575.1|WP_170300376.1|1339638_1339908_-|DUF5631-domain-containing-protein
MIDQAGSGHVLPGGRRPGPTLAEAVRRRDGLPRIAHAVAVAATRNYGVPDNEADLLHHKATQIRQSVLATYPNHDVAGLATAGVATERG
>NZ_AP022575.1|WP_083049974.1|1340283_1340625_+|glycohydrolase-toxin-TNT-related-protein
MPGTRIAYSDARQFVQEYGSLLDRVGDDEGAYSAVMKNGHASSWEEHALHVNSLGDPYRTYTLGRLPEGWSIEVSEVAPGLGQPGGSLQVRILDAQGEARSVEELLGPGVLLP
>NZ_AP022575.1|WP_083049915.1|1341467_1342946_+|hypothetical-protein
MPRARWLQSVQSVQSAVVVSAVVVVLTTAAPVVADAGEVGTRPPPTAPCDAISPIAIPCVALGKFADAVAAECRRVGIPGTRCGLPLAHRVTQAARDAYLQSWVHRTARFQYALQDPLPMRDAQWLGTHNSFNSLSDSFTISHADSNQQLSLTQQLDIDVRSIELDLHYVPRLELHGAPAVTVCHGLGPKNANLGCTVEPSFANVLPQIANWLNTPGHTDEVILLLIEDQLENAAAYASAVATLDHVLRRPNGTSLIYHPDPGQRAANGCVKFPLDASRDDVRASGARVVRVSSCVPSWSADVFDWAGREVQGGSTSRYQPYPACDATYGGAVYAARLVRYYEDSTLVSALADPTRPPANPEALTPPKVQAMTDCGVNLLGLDQLLPEDGRIQASLWSWAPDEPRAGAGTCTLQGADGRWVAAPCGDAHPAACRDATGTWPVTALVAFAGAASACAAIGADFALPRTGDQNAGLHSVAGAAGGAWVNFVVPS
>NZ_AP022575.1|WP_158084773.1|1342970_1343126_-|hypothetical-protein
MDRKTKKVALTARVLAAVAAATFAASTLSACDALYAQLHGIIPQDHSGHDH
>NZ_AP022575.1|WP_083049913.1|1343253_1344609_+|RNA-polymerase-sigma-factor-SigC
MRDDAGVRCEVAREALSARLDGERPEVLAQQVDAHLQSCRRCRTWLIGAAAQTRRFATVDTVPAPDLADRIMATAGVARVPAYRRWLPRLNYGHARWGLIGIGVFQVAIAAAQISGIDFGIMPHHGHGAMMTGAHLLHESTAWLLALGVAMIAAGIWPRAAVGVAAIAGAYAAALMAYVAFDAWRGEVTGARIASHVPVLVGVVFALLVARDRSGAPGSRPADAETDAAAQSPAATRGRHRGHFWPINRATTTRSMQREPSRLRWMPMTASSDDEAVTALALAAADGNAQALEAFIKATQQDVWRFVTYLSDAGSADDLTQETFLRAIGAIHRFAGRSSARTWLLAIARRVVADHIRQLQSRPRTAHGADTEHLLDGDRHSRGFEDLVEVTAMIAQLTSDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADTDRDDLTG
>NZ_AP022575.1|WP_083049911.1|1344693_1345443_-|SDR-family-NAD(P)-dependent-oxidoreductase
MDDTGAGPVVIFGGRSQIGIELARRLAPGATVVLAARGANRLDAQAAALREAGAARVDTREFDADDVASHGRLVAAIVAEHGPIGIAVLAFGILGDQARAERDAAHAVAIVHTDYVAQVSLLTQLAAAMRTAGRGTLVVFSSVAGVRVRRANYVYGSAKAGLDGFANGLADALHGTGVRVLIVRPGFVIGRMTQGMTPAPLSSTPERVAAATTRALAKGKRAVWVPGALRPVFFVLRLLPAFVWRRMPR
>NZ_AP022575.1|WP_142272098.1|1345472_1345892_+|F420-dependent-biliverdin-reductase
MAMANTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPQTHIARVITTGGSQKAVNADRGGIAVLSQVDGARWLSLEGRAAVNTDIGAVRDAELRYAQRYRTPRPNPRRVVIEVRVERVLGSADLLDRSGG
>NZ_AP022575.1|WP_083049968.1|1345938_1346787_+|class-A-beta-lactamase
MPLIGCAGRDRPTATSVRPMPDLTGHFAELERKYQARLGVYVPASGATAAIAYRADERFAFCSTFKAPLVAAVLHQFPLTHLDKVITYASNDIRSTSPITQQHVDTGMTVGQLCEAAIRYSDGTAANLLLADIGGTAAFTSYLRGLGDQASRLDQEEPELNRNPPEDHRDTTTPRAIALVFQQLALGDALPPDKRAMLTDWLARSTTGAKRIRAGFPADWKVIDKTGTGDYGRANDVAVVWSPGGAAQVVAIMSDRVTGGYDAQPSEALIAAAATRIAEALG
>NZ_AP022575.1|WP_142272102.1|1346859_1348137_+|methyltransferase-domain-containing-protein
MFPAVAVTEGVCAEVNEDPRADVVSRQYQRWMYPHPIADLAAWTSANWEWFDPAYSHRILWPDREYRPDLDILIAGCGTNQAAIFAFTNRAANVVAVDVSQPSLDHQQYLKDKHGLANLELRLLPIEELPTLGLDFDLIVSTGVLHHMADPQAGMNALAQCLRRDGVIAAMLYGKYGRVGVELLESAFRDMGFQQDAASIALVKKAISVVPPYHPVRSYLKKARDLLSDAALVDTFLHGRQRSYTVAECVDLVTSAGLVFQGWFHKTPYYPHDFFVPDNEFYAAVNALSEITMWAVMERLETLNGSHLFMACRPDRPKEQYTIDFSTRDCLDYVPLMRTRCGVSGTEMYWPGWRMTPKPDQLRFLRQVDGRRTIGEIVERVRQSGDSPAASTAELEEFGRMLFQSLWRLDFVAMALNATRGIDAG

Crispr_ID: NZ_AP022575_8

• CRISPR_ID: NZ_AP022575_8
• CRISPR_location: 2108477-2109076
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 8 spacers
• Cas_protein_info: cas2,cas1,csb3,cas3,csb2gr5,cas7

Consensus repeat of NZ_AP022575_8

Consensus_repeat	Method
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	PILER-CR
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CRISPRCasFinder
GCCTCGATGAAGTGCGGCCGCCGAAAC	CRT

spacers of NZ_AP022575_8

>8.1|2108513|35|NZ_AP022575|PILER-CR,CRISPRCasFinder
AAGCGAACTCGCCGCCGCGGCAATGGATTCGGAGA
>8.2|2108584|36|NZ_AP022575|PILER-CR,CRISPRCasFinder
CTGCCATACGCGGCGGACCCTTGCTAGGTAGTAGCT
>8.3|2108656|36|NZ_AP022575|PILER-CR,CRISPRCasFinder
CGGAAGATTGCGCGCACCACCGGGCGTGGCAGCAGC
>8.4|2108728|38|NZ_AP022575|PILER-CR,CRISPRCasFinder
ACCCGGCGTTGAGCACCCTAAATGGGTGACTGTTCCAG
>8.5|2108802|35|NZ_AP022575|PILER-CR,CRISPRCasFinder
CGGTTGAGCCGTTGCGGCGGTCGCCGTATCAGTCG
>8.6|2108873|36|NZ_AP022575|PILER-CR,CRISPRCasFinder
TCCCTCGATCGCCACTGACCGCAGGGTTTCCCGCTG
>8.7|2108945|35|NZ_AP022575|PILER-CR,CRISPRCasFinder
TGGGCGAGTCGTATGCAATGGTTGTGCCTGGCCGC
>8.8|2108504|44|NZ_AP022575|CRT
AGCCGCCGCAAGCGAACTCGCCGCCGCGGCAATGGATTCGGAGA
>8.9|2108575|45|NZ_AP022575|CRT
AGCCGCCGCCTGCCATACGCGGCGGACCCTTGCTAGGTAGTAGCT
>8.10|2108647|45|NZ_AP022575|CRT
GGCCGCCGCCGGAAGATTGCGCGCACCACCGGGCGTGGCAGCAGC
>8.11|2108719|47|NZ_AP022575|CRT
GGCCGCCGCACCCGGCGTTGAGCACCCTAAATGGGTGACTGTTCCAG
>8.12|2108793|44|NZ_AP022575|CRT
GGCCGCCGCCGGTTGAGCCGTTGCGGCGGTCGCCGTATCAGTCG
>8.13|2108864|45|NZ_AP022575|CRT
GGCCGCCGCTCCCTCGATCGCCACTGACCGCAGGGTTTCCCGCTG
>8.14|2108936|44|NZ_AP022575|CRT
GGCCGCCGCTGGGCGAGTCGTATGCAATGGTTGTGCCTGGCCGC
>8.15|2109007|43|NZ_AP022575|CRT
GGCCGCCGCCGGCCAACATGCGGGCAGCATGCAGTGCATGCAA

CRISPR arrays and Neighbor proteins around NZ_AP022575_8

CRISPR arrays

The CRISPR arrays of NZ_AP022575_8

>merge|NZ_AP022575|8|2108477-2109076|PILER-CR,CRISPRCasFinder,CRT
GCCTCGATGAAGTGCGGCCGCCGAAACAGCCGCCGCAAGCGAACTCGCCGCCGCGGCAATGGATTCGGAGAGCCTCGATGAAGTGCGGCCGCCGAAACAGCCGCCGCCTGCCATACGCGGCGGACCCTTGCTAGGTAGTAGCTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGGAAGATTGCGCGCACCACCGGGCGTGGCAGCAGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCACCCGGCGTTGAGCACCCTAAATGGGTGACTGTTCCAGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGGTTGAGCCGTTGCGGCGGTCGCCGTATCAGTCGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTCCCTCGATCGCCACTGACCGCAGGGTTTCCCGCTGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTGGGCGAGTCGTATGCAATGGTTGTGCCTGGCCGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGGCCAACATGCGGGCAGCATGCAGTGCATGCAAGCCTCGATGAAGTTGTTGACCGGCATT

>NZ_AP022575|8|2|2108477-2109015|PILER-CR
GCCTCGATGAAGTGCGGCCGCCGAAACAGCCGCCGC	AAGCGAACTCGCCGCCGCGGCAATGGATTCGGAGA
GCCTCGATGAAGTGCGGCCGCCGAAACAGCCGCCGC	CTGCCATACGCGGCGGACCCTTGCTAGGTAGTAGCT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGAAGATTGCGCGCACCACCGGGCGTGGCAGCAGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACCCGGCGTTGAGCACCCTAAATGGGTGACTGTTCCAG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGTTGAGCCGTTGCGGCGGTCGCCGTATCAGTCG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCCCTCGATCGCCACTGACCGCAGGGTTTCCCGCTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGGGCGAGTCGTATGCAATGGTTGTGCCTGGCCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC

>NZ_AP022575|8|5|2108477-2109015|CRISPRCasFinder
GCCTCGATGAAGTGCGGCCGCCGAAACAGCCGCCGC	AAGCGAACTCGCCGCCGCGGCAATGGATTCGGAGA
GCCTCGATGAAGTGCGGCCGCCGAAACAGCCGCCGC	CTGCCATACGCGGCGGACCCTTGCTAGGTAGTAGCT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGAAGATTGCGCGCACCACCGGGCGTGGCAGCAGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACCCGGCGTTGAGCACCCTAAATGGGTGACTGTTCCAG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGTTGAGCCGTTGCGGCGGTCGCCGTATCAGTCG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCCCTCGATCGCCACTGACCGCAGGGTTTCCCGCTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGGGCGAGTCGTATGCAATGGTTGTGCCTGGCCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC

>NZ_AP022575|8|3|2108477-2109076|CRT
GCCTCGATGAAGTGCGGCCGCCGAAAC	AGCCGCCGCAAGCGAACTCGCCGCCGCGGCAATGGATTCGGAGA
GCCTCGATGAAGTGCGGCCGCCGAAAC	AGCCGCCGCCTGCCATACGCGGCGGACCCTTGCTAGGTAGTAGCT
GCCTCGATGAAGTGCGGCCGCCGAAAC	GGCCGCCGCCGGAAGATTGCGCGCACCACCGGGCGTGGCAGCAGC
GCCTCGATGAAGTGCGGCCGCCGAAAC	GGCCGCCGCACCCGGCGTTGAGCACCCTAAATGGGTGACTGTTCCAG
GCCTCGATGAAGTGCGGCCGCCGAAAC	GGCCGCCGCCGGTTGAGCCGTTGCGGCGGTCGCCGTATCAGTCG
GCCTCGATGAAGTGCGGCCGCCGAAAC	GGCCGCCGCTCCCTCGATCGCCACTGACCGCAGGGTTTCCCGCTG
GCCTCGATGAAGTGCGGCCGCCGAAAC	GGCCGCCGCTGGGCGAGTCGTATGCAATGGTTGTGCCTGGCCGC
GCCTCGATGAAGTGCGGCCGCCGAAAC	GGCCGCCGCCGGCCAACATGCGGGCAGCATGCAGTGCATGCAA
GCCTCGATGAAGTTGTTGACCGGCATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_142272181.1|2119529_2120555_-|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	gnl|CDD|187733
NZ_AP022575.1|WP_083051501.1|2124934_2126140_-|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	gnl|CDD|378223
NZ_AP022575.1|WP_083048404.1|2105920_2106133_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl|CDD|227737
NZ_AP022575.1|WP_083048482.1|2105097_2105760_+|hypothetical-protein	unknown	unknown	gnl|CDD|374742
NZ_AP022575.1|WP_083051489.1|2117638_2117941_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_AP022575.1|WP_083051498.1|2123370_2124930_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl|CDD|274005
NZ_AP022575.1|WP_083048481.1|2106132_2106546_+|PIN-domain-nuclease	unknown	unknown	gnl|CDD|350322
NZ_AP022575.1|WP_083051504.1|2126746_2127193_-|prepilin-peptidase	unknown	unknown	gnl|CDD|224900
NZ_AP022575.1|WP_083052646.1|2111455_2112082_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083048479.1|2106584_2106842_+|CopG-family-transcriptional-regulator	unknown	unknown	gnl|CDD|279710
NZ_AP022575.1|WP_142272182.1|2120551_2123371_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl|CDD|274235
NZ_AP022575.1|WP_083048406.1|2104441_2105101_+|hypothetical-protein	unknown	unknown	gnl|CDD|374742
NZ_AP022575.1|WP_083048403.1|2106838_2107216_+|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350308
NZ_AP022575.1|WP_083048399.1|2108017_2108239_-|type-II-toxin-antitoxin-system-antitoxin-VapB20	unknown	unknown	gnl|CDD|279710
NZ_AP022575.1|WP_163662916.1|2109184_2109997_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|225806
NZ_AP022575.1|WP_158084757.1|2104307_2104445_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083048400.1|2107628_2108021_-|PIN-domain-containing-protein	unknown	unknown	gnl|CDD|350247
NZ_AP022575.1|WP_083048401.1|2107231_2107609_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083051492.1|2117937_2119533_-|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187766
NZ_AP022575.1|WP_083051507.1|2127204_2128032_-|shikimate-dehydrogenase	unknown	unknown	gnl|CDD|273813

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP022575.1|WP_142272181.1|2119529_2120555_-|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	1e-88	292.5	0.3
NZ_AP022575.1|WP_083051501.1|2124934_2126140_-|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	1.2e-18	62.5	0.0
NZ_AP022575.1|WP_142272182.1|2120551_2123371_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	9e-90	296.3	0.4
NZ_AP022575.1|WP_083051489.1|2117638_2117941_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	3.7e-20	66.7	0.1
NZ_AP022575.1|WP_083051498.1|2123370_2124930_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	3.3e-76	251.9	15.5
NZ_AP022575.1|WP_083051492.1|2117937_2119533_-|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.4e-84	278.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_142272181.1|2119529_2120555_-|hypothetical-protein	gnl|CDD|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	3.30676e-85
NZ_AP022575.1|WP_083051501.1|2124934_2126140_-|type-I-U-CRISPR-associated-protein-Cas7	gnl|CDD|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.78718e-39
NZ_AP022575.1|WP_083048404.1|2105920_2106133_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl|CDD|227737	COG5450, COG5450, Transcription regulator of the Arc/MetJ class [Transcription].	0.000189889
NZ_AP022575.1|WP_083048406.1|2104441_2105101_+|hypothetical-protein	gnl|CDD|374742	pfam16708, LppA, Lipoprotein confined to pathogenic Mycobacterium. This is a family of lipoproteins found only in pathogenic mycobacteria. These pathogenic lipoproteins may play a role in host-pathogen interactions. Lipoproteins localized to the cell-envelope of pathogenic bacteria are major determinants of virulence. The proteins are localized to the cell-surface via an N-terminal lipidation carried out by a transferase - pro-lipoprotein diacylglyceryl transferase Lgt - which attaches a diacylglyceride molecule to a sulfur atom from a crucial cysteine, and a consecutively acting lipoprotein signal peptidase LspA that cleaves the signal peptide just before the modified cysteine. When the peptidase is inactivated the pathogen has difficulty in replicating inside macrophages.	2.41871e-34
NZ_AP022575.1|WP_083048482.1|2105097_2105760_+|hypothetical-protein	gnl|CDD|374742	pfam16708, LppA, Lipoprotein confined to pathogenic Mycobacterium. This is a family of lipoproteins found only in pathogenic mycobacteria. These pathogenic lipoproteins may play a role in host-pathogen interactions. Lipoproteins localized to the cell-envelope of pathogenic bacteria are major determinants of virulence. The proteins are localized to the cell-surface via an N-terminal lipidation carried out by a transferase - pro-lipoprotein diacylglyceryl transferase Lgt - which attaches a diacylglyceride molecule to a sulfur atom from a crucial cysteine, and a consecutively acting lipoprotein signal peptidase LspA that cleaves the signal peptide just before the modified cysteine. When the peptidase is inactivated the pathogen has difficulty in replicating inside macrophages.	1.76889e-37
NZ_AP022575.1|WP_083051498.1|2123370_2124930_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl|CDD|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	1.4628e-64
NZ_AP022575.1|WP_083048481.1|2106132_2106546_+|PIN-domain-nuclease	gnl|CDD|350322	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC3 and VapC21 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.31508e-53
NZ_AP022575.1|WP_083051504.1|2126746_2127193_-|prepilin-peptidase	gnl|CDD|224900	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	3.08921e-11
NZ_AP022575.1|WP_083048479.1|2106584_2106842_+|CopG-family-transcriptional-regulator	gnl|CDD|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	4.73967e-05
NZ_AP022575.1|WP_142272182.1|2120551_2123371_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	1.41713e-86
NZ_AP022575.1|WP_083051489.1|2117638_2117941_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	9.34174e-19
NZ_AP022575.1|WP_083048403.1|2106838_2107216_+|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350308	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.02343e-39
NZ_AP022575.1|WP_083048399.1|2108017_2108239_-|type-II-toxin-antitoxin-system-antitoxin-VapB20	gnl|CDD|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	9.95052e-05
NZ_AP022575.1|WP_163662916.1|2109184_2109997_-|AAA-family-ATPase	gnl|CDD|225806	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].	3.1085e-101
NZ_AP022575.1|WP_083048400.1|2107628_2108021_-|PIN-domain-containing-protein	gnl|CDD|350247	cd18680, PIN_MtVapC20-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC20 and related proteins. M. tuberculosis VapC20 inhibits translation by site-specific cleavage of the universally conserved Sarcin-Ricin loop in 23S rRNA. This subfamily belongs to the VapC (virulence-associated protein C)-like nuclease family of the PIN domain-like superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1.	2.54318e-52
NZ_AP022575.1|WP_083051492.1|2117937_2119533_-|CRISPR-associated-endonuclease-Cas4/Cas1	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	7.89489e-97
NZ_AP022575.1|WP_083051507.1|2127204_2128032_-|shikimate-dehydrogenase	gnl|CDD|273813	TIGR01809, Shik-DH-AROM, shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. [Amino acid biosynthesis, Aromatic amino acid family].	1.55949e-112

Protein sequences

>NZ_AP022575.1|WP_083048399.1|2108017_2108239_-|type-II-toxin-antitoxin-system-antitoxin-VapB20
MKRLQIYIDEDVDRALAVEARRRRTSKAALIREYVAEHLRQPGPDPVDAFVGSFDGGADLSASVDDVVYGKRE
>NZ_AP022575.1|WP_083048400.1|2107628_2108021_-|PIN-domain-containing-protein
MIFADTSFWAALGNVGDARHGAAKRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAVAAAAIRFSTVVRVEHVTADLEEQAWEWLARHDEREYSFVDATSFALMRKKSIRNAYAFDGDFSAAGFVEVRP
>NZ_AP022575.1|WP_083048401.1|2107231_2107609_-|hypothetical-protein
MQPDSLEQRRVTALESRVRELADRVRASERDAAAARVLAGAADRDVTEFIGELRDFRRATIGSFNALREEMTERFSRVEDRFSRVEERFSRVDDGFTEMRGKLDGAAAGQQRIVELIERLIANQG
>NZ_AP022575.1|WP_083048403.1|2106838_2107216_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MKLIDTSVAVDHLRGEPAAAGLLAELVHNGEQIAASELVRFELLAGARETELAALEAFFSALTWTRVTEDIARLGGQLARRYRRSHSGIDDVDYLIAATALVVDADLLTTNVCHFPMFRDLQPPY
>NZ_AP022575.1|WP_083048479.1|2106584_2106842_+|CopG-family-transcriptional-regulator
MRTQVTLGAEELELLDRAAKASGASRSELIRRAIHSVYGTRSKQERLAALDHSRGSWQGRDFTGTDYVDAIRGDLNARLARLGLA
>NZ_AP022575.1|WP_083048481.1|2106132_2106546_+|PIN-domain-nuclease
MLFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSAKSATDYDALADELDGLARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTVVWHYDEDYDRVAAITGQPTEWIVPRGTL
>NZ_AP022575.1|WP_083048404.1|2105920_2106133_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MSRRTTIDIDDILLARAQAALGTTGLKDTVDAALRAAVRQSARTRLTARIASGAGIDRSEALLAQTRPVR
>NZ_AP022575.1|WP_083048482.1|2105097_2105760_+|hypothetical-protein
MITPQPLPRTLSRWQRIITLTMIGISTALIGGCTMDHNPDTSRRLTDEQKIQLIDSMRNKGSYEAARERLTATARIIADRISAAITGQTWKFTEDPAGRKADREGLSCKELTGDIARRPIADAVIFGTAFSAEDFKVVTNIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFRLLQIKFATLDIIGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
>NZ_AP022575.1|WP_083048406.1|2104441_2105101_+|hypothetical-protein
MIAPQPIPRTLSRWQRIITLTMIGISTALLGGCTMDQNPDKSRHLTDEQKIQLIDSMRHKGSYEAARERLTTTARIIADRISAAVPGQTWKFNDDSYGQDFYKNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKAASNIVREEAAKYGATTESSLFNESAKREYDVQGNGYEFNLGQINFATLLITGECLLLQKVLDLPAGQLPPAPPIWPTTSTPH
>NZ_AP022575.1|WP_158084757.1|2104307_2104445_+|hypothetical-protein
MGDHKTAATGHSQYGQDPLQRMTGYNLATILLNRPDLAVRESPQQ
>NZ_AP022575.1|WP_163662916.1|2109184_2109997_-|AAA-family-ATPase
MMDKLISYYGFSRIPFGRDLAPSMLHRHGAHNEAVARIGWCVADRRIGVVTGEVGAGKTVAVRAALTALDRSRHAVIYLPDPTVGVRGIHHRIVASLGGQPLTHHATLAPQAADALAAEQAERGRTPVVVVEEAHLLDYDQLEALRLLTNHDLDSSSPFACLLIGQPTLRRRMKLGVLAALDQRIGLRYAMPPMTDKETASYLRHHLALAGRDDTLFSDDAVTLVHQTSRGYPRAVNNLALQALVAAFAADKAIVDESSTRTAIAEVTAD
>NZ_AP022575.1|WP_083052646.1|2111455_2112082_-|hypothetical-protein
MVTVEADVDLVERRLAAGELSCPFCGGVLAGWGRARARQLRGVDGPVELHPRRSRCTGCGVTHVLLPVTALLRRADTAAVVVSALVAKGASRVGFRRIAADVARPAETVRGWLRRFAERAEAVRSVFTVWLAAVAADPVMPDAAGGVFIDAVSAMVALAAAIGRRFSLPRVSLAEVAVAVSGGRLLAPGWPGEPVQHESTLPAARITP
>NZ_AP022575.1|WP_083051489.1|2117638_2117941_-|CRISPR-associated-endonuclease-Cas2
MSRSDARRFLIAYDIPDDRRRDRLAKRLERHGDRVQYSVFVVDASPARIARLKNEISTIIVTALDSVLLCDLGLVQNVDHGRFAFIGRSRPIMTSGPIVT
>NZ_AP022575.1|WP_083051492.1|2117937_2119533_-|CRISPR-associated-endonuclease-Cas4/Cas1
MTAPDPLPISLVSHHVFCPRRAWLEAAGEQTDTYQMSVGELSHRATDNPANSRGGRHRSVDIAHPAWGITGRADAVEDHDGSLRVVEYKATPVRREAEPTDTMRVQLALQSACLEAMGHTVVEHGVYFTTHHKYVPVALSTKDFDAARAEVSKTRATLQSSTAPAPLEDDPRCMRCSHVGVCLPEERAQNPVIRRIHAADPDSQIIHLATSGSRASIRHGRLCVSARGEEVASFPLERVSGLVVHGNIDLSSALIRELLWRGLTIVWCSGTGRVIGWGHTANTPNGLARVRQHQASAEGRLALAREFIGAKIANQATLLRRNGDAPATVSYLRMLQRTALSAETLGALYGFEGEAAARYFASFSTMLRPRQAEVFLARWPGRAGRGALDPLNVALNFVYGVLVAETIRAVAACGLDPHAGFLHSSNRNKPALALDLMEEFRAPLGDAVVLTAINNGEITESGFSSALGSCRLRDSGRKALLSAYERRLATEFTHPVFKYKVTWRRAIEVQARMVLGYIDGSQAKYTGVATR
>NZ_AP022575.1|WP_142272181.1|2119529_2120555_-|hypothetical-protein
MSVFTPAGSITSALSHFALFGLAAICESELAVSARVWWTDERIPHPQLDAGREPRAVAEAVHRHATKRASPDSWLAAQLEHEERTTAAFSPRIKAPSSPSAWRHLQTTRHAALDRLVAGHNWLDLRMVGALGEPSYWLADKSPDGGASRWEMKTRNRGEEFVGNRLLPVANCVAARQVEEVLSGLTGGTINDEVARNQPDSRSATGFARPGPVDNALVWCTLWGISQFPVVHHTDAQSVTAGTYVPGKRTHPTFVFLPAPTRPTTLARLRTIIASMHLFVVGSVAQNSKPLDEIAAAVSRKWLADRGIRALIRFPVDVSDNPSAPERQVLDGVAIPLGGQL
>NZ_AP022575.1|WP_142272182.1|2120551_2123371_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MVLRTEDFDAFFAAFNDGHRPFAWQRRLFDELATTGCWPGRIIAPTGAGKSSVVDIHIFAVALSAMREIARVPRRLALVVNRRALVDNQAQRAQRIQESLNNAPPGSLLGKIATALRSLRIGDPTDSDHPVFDVVDLRGGVPPRRGWVADPSACQIICATPDMWGSRVLFRGYGTSRLARPREAGLLVYDAAIVLDEAHLNHQLLLTARRVAQFARSHSTAIGVPGLQVVETTATPTDSSFVDEERVEIRVESADIAGNDDELTRRLTTPKPVQRISAATWPPSRGGASRTQYIDVLVGETIRLHQEFGPTVGCVVNTVTLATDIATRLRSSGLLVELLVGRMRPYDRAVLESRRPNLLTVLGNPDVDVLVATQTLEVGVDIDFSALVTELAPASALAQRAGRVNRVGKVDRTEVVVIGPAPESPLLSANLDCKDRRALTVPPYVRTGDVDASEHVRRTWEWLGEREADPRGMSPWALTESQPPVQHPQRTLLQRLEPYDAWFLSRTGADLFDEPDLELWLRDSLEPDEVTSGVVARALLPVDDSAAIGLLSVTPPIQREIYPATLGTTRTLISSILSGNTDMAPRRAFLFRDNEIRPIGDTSDLKPGDIAIVDCRHKICTAGVVTPTPSEEGSDVFEDVVRQEGAKRVARFVAGMSDQVDRLLDDFADLIASSGGEFDDVEVAQLLYSYRDDDARLAMFTEDLRSNATNMSIDFGGLEDPESRWLVISVVQQPADVGESTQQVWTPSPSPVLLDAHNAAVAERARALALGVGLSAPLQDALSDAGRFHDVGKRDRRFQRFRLGNSEPDRYLLAKSHTGSIRQVARAQNAGGLPTQWRHEQLSAAIASTELDASDCRDLVLRLVGTSHGYGRPDFPHVSDGLLSCDEEGRVIQHAVKLFDIGDWDVVIESTHQCWGVWGCAYMEAILRAADGQVSAEGR
>NZ_AP022575.1|WP_083051498.1|2123370_2124930_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MAIGIEATFLLGTFTGHRPDGSPDQLPDPARLHAALLNAAGQGSTAVHDKSGLHASAKAIAALEWLDANPPTGIRLPRVYPVAALPITAFRREGVIRKEGGAWTDKIGGRPFSDGYAVDGPVGWCWDHGIPEAVRAALEELCADVGCLGEATSPVRLVVTDIEPTHSLDSGASIFVAGGTDLRVPTTGRTAALTAAHTTANGKSPSIAGDRHKTDENPSPPTPTRQAVESRRYRPRGAAPTDAPWATVVLLATARTIQPAHRVRWCTALHRALIARIGFGAPPLITGAYAKGVRQPANRLAIQFLPAGMLAQHGMASGAFALLIPSDASSEELAPLHHALTGLRRFSLEGRHAVLGTPVTVRGDEFWHPPLPGHARRWTTNPVAVPETSPQRRGHGVGGSRSRWTLRDAARVSVGLVWRDIVAPRRDSSRWFEEIAARTVDYGVKVHEARLLHTSDVAAWVHKTPKQILVQPYRATLSLGGLAADRTLVAIGQSRHLGGGLLVPVDSPADGFADPAEDA
>NZ_AP022575.1|WP_083051501.1|2124934_2126140_-|type-I-U-CRISPR-associated-protein-Cas7
MPTLDYSQLYEACSPGGSSAYISVTELAPAGGPHAGVAPARYVDGTKPTFAYETRFVDGKPVTTAILDSKQSQANRMEVAILNDIRDGHPIIGRVPRMQVTYFGGEAVFTDLELPHRAFDGHIRAGTVGGQPVTANPTFRSARDASPANARALLELSPGSLVFGAWDSTRKTRQGRYRSALVGEIIGVLASQDDRATNPPRRGGARVDPVGMSVQLVGDDLLAVMSDQSEELSPKLIDKIEKAAKRRGEKGNSGSVLGLGGIPPTLENLGVVACSRIIRTHVLSFAALRQLRFGSDSGGDVACRALLAAYALAGLARSDSELNLRANCDLVEKGPASVRLDARGGKHIALEALSIAGADELLAEALAEAERRANVDWHGQVFEVVGNPVIYSAATAESAEE
>NZ_AP022575.1|WP_083051504.1|2126746_2127193_-|prepilin-peptidase
MLAGTVLLWMAALCVYDIRQRRLPNTLTLPGAGVILLVAVFAGHGLPALAGAAALAGVYLLVHLAAPAAMGAGDVKLAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMVTPWGVRTLPHGPSMCVATAGAVGLIGSPLVEPGAISV
>NZ_AP022575.1|WP_083051507.1|2127204_2128032_-|shikimate-dehydrogenase
MSSTARASSAPNKAGVLGSPITHSRSPQLHLAAYRALGLHDWTYERIECGAEQLPGVVGGFGPEWVGVSVTMPGKFAALRFADEHTARADLVGSANTLVRTARGWRADNTDIDGVAGALGTVSGHALVLGSGGTAPAAVVALAELGVTGVTVVARNPDKAARLVDLGTRVGVPTRFCGLDDDRLAAEVAAAGVLVSTLPAGVASRYAGTLAAVPVLLDAVYDPWPTPLAAAVAAAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAMTCALAALD

Crispr_ID: NZ_AP022575_9

• CRISPR_ID: NZ_AP022575_9
• CRISPR_location: 2112276-2117449
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 71 spacers
• Cas_protein_info: cas2,cas1,csb3,cas3,csb2gr5,cas7

Consensus repeat of NZ_AP022575_9

Consensus_repeat	Method
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CRISPRCasFinder
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CRT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	PILER-CR

spacers of NZ_AP022575_9

>9.1|2112312|36|NZ_AP022575|CRISPRCasFinder,CRT
ATCGCAGCAGGTTTCCGATGAGTGATGTTTTGCCGG
>9.2|2112384|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GAGCGCCGGCCGACAGGTCACCCGACAGGGTGATGT
>9.3|2112456|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TGGACACTGTCATTGGCGATGTCGAAAGCGAACTCAT
>9.4|2112529|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TTCACCACTGGCGATGCTGTAGTCGCGGCTGCCCCT
>9.5|2112601|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CACAGGGTTGGGGTTGCCGCCGCGCCCGTACAGCCC
>9.6|2112673|40|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTTCTGACCTCCTGTGTGAGATGACTACGTGTCATCAATG
>9.7|2112749|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTGGCCGGCCACACACGCAGCAGATGCCCTGCAGT
>9.8|2112820|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CACTCCGCCTTGGCCGCCCGCGTCAACGAGGTTGA
>9.9|2112891|38|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
AGGCGAATCCGGATGGTTTGCACACCATTTGGCACGGT
>9.10|2112965|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTACACTATGCCCTGCCCTGACTGCGGTGCCCGCGT
>9.11|2113037|38|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTGCGGCACCTCGTCGGCGAACCTGCTGATCGTGTCAA
>9.12|2113111|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGCAAACCCCATCTGGTGCAGACTGCCACCAGTGGC
>9.13|2113183|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GTGCCCACTCGTTCGTCGTTTAGTGCCAGCAACAC
>9.14|2113254|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GCGAGACCGGCGATACGAGTGCGCGTCCACTGAGCGC
>9.15|2113327|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGCCACCACGCCACTACGACTGCGCCGATACATCGGC
>9.16|2113400|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGCTGACGTTTCAATGGGGGGTTGACACACCCTAAT
>9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTGACCTGCGGCCTGTGGCTGCCGGTGTGGCTGATC
>9.18|2113544|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
ATTATCTGGCGCCAACACCGTCTCCGCCGATGACAA
>9.19|2113616|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TACACCTTGGGCAAGTTCACCGCCCCCCAAGAGCA
>9.20|2113687|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
ACGGTGCCGACCCTTGCGTCCCACGCGGGATGGGT
>9.21|2113758|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TCGACATCGACCCACCCGAAGGGATGCGATCACTG
>9.22|2113829|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
AGGTTACATCCGCGATGTACTCAGCGTGCGGGATT
>9.23|2113900|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
ACGTCGTTTTGGGTTGAGGTGCAGCCGTTGATGCCG
>9.24|2113972|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TATCATACATTCGCTGAAACTCGTGGAGCCTGCGC
>9.25|2114043|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CCGGTGGTGCCGCGACGTTTAGCGATCACAATTCCAA
>9.26|2114116|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TTGTATTGTGCCGCCAGTATCGCTCTTCCCCCTAGTG
>9.27|2114189|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGGTGAATCCGCCGCATGTGTGACGCGGCGCAATCCA
>9.28|2114262|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGTCTGTTTCGCTCGCTGCTGATGAAACTTACGAA
>9.29|2114333|38|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTGCAGTCGTAAAGGTCGGGGCCGACACCGCCAAAGCC
>9.30|2114407|34|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TCGCCGGCTTTAGTGAGGGCTTGGCCGCTGCGAC
>9.31|2114477|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
AGCATTAGGCGACCCCGACCTGCTGCGGGTCATCGC
>9.32|2114549|40|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TGTCGGCCATCTTGGAGCCCCCTGGACCGCATCTGCGCAA
>9.33|2114625|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GGTGGGCCGCGACGTCATCAAATGCGCGTCGTGCGG
>9.34|2114697|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GTTCGCTTTGGTGCGCGGATAAGCGTTGGGGCACGGT
>9.35|2114770|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GGGGACCCCCCAACCGGCGCAGTGCTCGATGCGGCCA
>9.36|2114843|40|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTCGCAGCGAGGCACCCCTAAGCGCGTAGCCGAGCGCCAG
>9.37|2114919|39|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TTGAACCGCTGCTGCTGCTCCGGCGAAAGAAGTTGAGGG
>9.38|2114994|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GTTTGACAACTGGCTGATGGGGCCGGTACGGGATGCG
>9.39|2115067|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GTGAGTCTGCGGGCTTTTTCCGACCACTTGTGCGGGA
>9.40|2115140|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TGTGACGAATCCGCCGCCCCGTCGACCACCGCTCGA
>9.41|2115212|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CCATAATTGGGTGGAAAAGGGGACGCGATAACCGCA
>9.42|2115284|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GCGATCCCCTGGTATCCGTGCTCGGGATGCCCCAG
>9.43|2115355|39|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GGGCGAACCACGGAGGCGGCGCCTGCTAGTTTCACTGGC
>9.44|2115430|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGCCGGGCAGCCGTATCGCCCGTAGCTGTCCGCGCT
>9.45|2115502|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
ATGGCCTGCAGTACGCTAAGGAGCAGGGCTTTATCAC
>9.46|2115575|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
ACGTGGTGGCGAAAGTTGCGCGCAGCCAAGTTATTTG
>9.47|2115648|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TAAATGCCGGCCAGGAGTGTACTGCTCGTCCAGCCC
>9.48|2115720|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTGGTGCACCAGTCCGTCTGCTCGAAGTAGGCAGG
>9.49|2115791|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TCGGCCGGGTTGGCGATATCGGAGCCGGTGCTGCTA
>9.50|2115863|38|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGCTTGTAGAACAAGCATGTAATTGTGGAATGCAACCC
>9.51|2115937|38|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGGCCCTCGTAGGCGGCCCCGCTAGCAATCTCCTCGGT
>9.52|2116011|39|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CCGCACGTCGGCGCCTTCTGCTCGGCGCGCAAATAAATT
>9.53|2116086|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TCGTCTGCAGATCAGCTCGCGCACGGTCCAGCGCTGG
>9.54|2116159|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GTGGCGGACATCATCGACATCATGGCAAGTCCAGCAA
>9.55|2116232|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
AAGTCCTCGACGCGTTCGCCATCACCGCGTCACCCA
>9.56|2116304|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GCGGCCCGGGGTTGATGATGTGATGCGAATGTTGC
>9.57|2116375|33|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGGGGTCGCACCGTTGTCCATGAACCGCTGCTT
>9.58|2116444|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
GCGTACATGGCGAGCTGCGCGCCGGTGGAATGCGG
>9.59|2116515|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGACTGCACTGCGAAACCGGGCCGGCCGTCGCATGG
>9.60|2116587|34|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
ATGCGACCGACATTTCCGGCACTGTCACCGACGA
>9.61|2116657|40|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
TCGTGTCGGCGTCGGGTGTCATCGTCGGCAGTTGCGGGCC
>9.62|2116733|33|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CATCCGTCGGCCGGGGGGAATGGTTCGGCGCTC
>9.63|2116802|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CACTACTTCGCCGACCTCTTTCCGCGGGTGTCGTTAA
>9.64|2116875|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTGCTTCCGCGGCATTTCCGCCCACACGGTGGTGATG
>9.65|2116948|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGTTACATGCTTCATCATCGATCACGCCTTTCCCAT
>9.66|2117020|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGTACACGTTCACGGTGCGCGGCGGAGCGGCTGGAA
>9.67|2117092|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTGGCGCTAACTTGGCTGGCGCTAGCCTGGTCAGTGC
>9.68|2117165|34|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CTGCGTACTAAGCGGGTTAGCACTGCTGGACCGC
>9.69|2117235|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
CGTCGCCGGGGTCCGCGAAATGGTCGCTGCCGTCGG
>9.70|2117307|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
ATGACGCAGATGGCGTATGGTGGCGCTTATGACGA
>9.71|2117378|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR
ATGCGATGACCCAAACTGCGGAGGTGACTGGTGAGC

CRISPR arrays and Neighbor proteins around NZ_AP022575_9

CRISPR arrays

The CRISPR arrays of NZ_AP022575_9

>merge|NZ_AP022575|9|2112276-2117449|CRISPRCasFinder,CRT,PILER-CR
CCGAACATGAAGTGCGGCCGCCGAAACGGCCGCCGCATCGCAGCAGGTTTCCGATGAGTGATGTTTTGCCGGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGAGCGCCGGCCGACAGGTCACCCGACAGGGTGATGTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTGGACACTGTCATTGGCGATGTCGAAAGCGAACTCATGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTTCACCACTGGCGATGCTGTAGTCGCGGCTGCCCCTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCACAGGGTTGGGGTTGCCGCCGCGCCCGTACAGCCCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTTCTGACCTCCTGTGTGAGATGACTACGTGTCATCAATGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTGGCCGGCCACACACGCAGCAGATGCCCTGCAGTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCACTCCGCCTTGGCCGCCCGCGTCAACGAGGTTGAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCAGGCGAATCCGGATGGTTTGCACACCATTTGGCACGGTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTACACTATGCCCTGCCCTGACTGCGGTGCCCGCGTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTGCGGCACCTCGTCGGCGAACCTGCTGATCGTGTCAAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGCAAACCCCATCTGGTGCAGACTGCCACCAGTGGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGTGCCCACTCGTTCGTCGTTTAGTGCCAGCAACACGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGCGAGACCGGCGATACGAGTGCGCGTCCACTGAGCGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGCCACCACGCCACTACGACTGCGCCGATACATCGGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGCTGACGTTTCAATGGGGGGTTGACACACCCTAATGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTGACCTGCGGCCTGTGGCTGCCGGTGTGGCTGATCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCATTATCTGGCGCCAACACCGTCTCCGCCGATGACAAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTACACCTTGGGCAAGTTCACCGCCCCCCAAGAGCAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCACGGTGCCGACCCTTGCGTCCCACGCGGGATGGGTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTCGACATCGACCCACCCGAAGGGATGCGATCACTGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCAGGTTACATCCGCGATGTACTCAGCGTGCGGGATTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCACGTCGTTTTGGGTTGAGGTGCAGCCGTTGATGCCGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTATCATACATTCGCTGAAACTCGTGGAGCCTGCGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCCGGTGGTGCCGCGACGTTTAGCGATCACAATTCCAAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTTGTATTGTGCCGCCAGTATCGCTCTTCCCCCTAGTGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGGTGAATCCGCCGCATGTGTGACGCGGCGCAATCCAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGTCTGTTTCGCTCGCTGCTGATGAAACTTACGAAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTGCAGTCGTAAAGGTCGGGGCCGACACCGCCAAAGCCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTCGCCGGCTTTAGTGAGGGCTTGGCCGCTGCGACGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCAGCATTAGGCGACCCCGACCTGCTGCGGGTCATCGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTGTCGGCCATCTTGGAGCCCCCTGGACCGCATCTGCGCAAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGGTGGGCCGCGACGTCATCAAATGCGCGTCGTGCGGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGTTCGCTTTGGTGCGCGGATAAGCGTTGGGGCACGGTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGGGGACCCCCCAACCGGCGCAGTGCTCGATGCGGCCAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTCGCAGCGAGGCACCCCTAAGCGCGTAGCCGAGCGCCAGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTTGAACCGCTGCTGCTGCTCCGGCGAAAGAAGTTGAGGGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGTTTGACAACTGGCTGATGGGGCCGGTACGGGATGCGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGTGAGTCTGCGGGCTTTTTCCGACCACTTGTGCGGGAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTGTGACGAATCCGCCGCCCCGTCGACCACCGCTCGAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCCATAATTGGGTGGAAAAGGGGACGCGATAACCGCAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGCGATCCCCTGGTATCCGTGCTCGGGATGCCCCAGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGGGCGAACCACGGAGGCGGCGCCTGCTAGTTTCACTGGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGCCGGGCAGCCGTATCGCCCGTAGCTGTCCGCGCTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCATGGCCTGCAGTACGCTAAGGAGCAGGGCTTTATCACGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCACGTGGTGGCGAAAGTTGCGCGCAGCCAAGTTATTTGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTAAATGCCGGCCAGGAGTGTACTGCTCGTCCAGCCCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTGGTGCACCAGTCCGTCTGCTCGAAGTAGGCAGGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTCGGCCGGGTTGGCGATATCGGAGCCGGTGCTGCTAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGCTTGTAGAACAAGCATGTAATTGTGGAATGCAACCCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGGCCCTCGTAGGCGGCCCCGCTAGCAATCTCCTCGGTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCCGCACGTCGGCGCCTTCTGCTCGGCGCGCAAATAAATTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTCGTCTGCAGATCAGCTCGCGCACGGTCCAGCGCTGGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGTGGCGGACATCATCGACATCATGGCAAGTCCAGCAAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCAAGTCCTCGACGCGTTCGCCATCACCGCGTCACCCAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGCGGCCCGGGGTTGATGATGTGATGCGAATGTTGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGGGGTCGCACCGTTGTCCATGAACCGCTGCTTGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCGCGTACATGGCGAGCTGCGCGCCGGTGGAATGCGGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGACTGCACTGCGAAACCGGGCCGGCCGTCGCATGGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCATGCGACCGACATTTCCGGCACTGTCACCGACGAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCTCGTGTCGGCGTCGGGTGTCATCGTCGGCAGTTGCGGGCCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCATCCGTCGGCCGGGGGGAATGGTTCGGCGCTCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCACTACTTCGCCGACCTCTTTCCGCGGGTGTCGTTAAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTGCTTCCGCGGCATTTCCGCCCACACGGTGGTGATGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGTTACATGCTTCATCATCGATCACGCCTTTCCCATGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGTACACGTTCACGGTGCGCGGCGGAGCGGCTGGAAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTGGCGCTAACTTGGCTGGCGCTAGCCTGGTCAGTGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCTGCGTACTAAGCGGGTTAGCACTGCTGGACCGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCCGTCGCCGGGGTCCGCGAAATGGTCGCTGCCGTCGGGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCATGACGCAGATGGCGTATGGTGGCGCTTATGACGAGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGCATGCGATGACCCAAACTGCGGAGGTGACTGGTGAGCGCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC

>NZ_AP022575|9|6|2112276-2117449|CRISPRCasFinder
CCGAACATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATCGCAGCAGGTTTCCGATGAGTGATGTTTTGCCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GAGCGCCGGCCGACAGGTCACCCGACAGGGTGATGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGGACACTGTCATTGGCGATGTCGAAAGCGAACTCAT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TTCACCACTGGCGATGCTGTAGTCGCGGCTGCCCCT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CACAGGGTTGGGGTTGCCGCCGCGCCCGTACAGCCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTTCTGACCTCCTGTGTGAGATGACTACGTGTCATCAATG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGGCCGGCCACACACGCAGCAGATGCCCTGCAGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CACTCCGCCTTGGCCGCCCGCGTCAACGAGGTTGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AGGCGAATCCGGATGGTTTGCACACCATTTGGCACGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTACACTATGCCCTGCCCTGACTGCGGTGCCCGCGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCGGCACCTCGTCGGCGAACCTGCTGATCGTGTCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCAAACCCCATCTGGTGCAGACTGCCACCAGTGGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTGCCCACTCGTTCGTCGTTTAGTGCCAGCAACAC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGAGACCGGCGATACGAGTGCGCGTCCACTGAGCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCCACCACGCCACTACGACTGCGCCGATACATCGGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCTGACGTTTCAATGGGGGGTTGACACACCCTAAT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGACCTGCGGCCTGTGGCTGCCGGTGTGGCTGATC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATTATCTGGCGCCAACACCGTCTCCGCCGATGACAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TACACCTTGGGCAAGTTCACCGCCCCCCAAGAGCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACGGTGCCGACCCTTGCGTCCCACGCGGGATGGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGACATCGACCCACCCGAAGGGATGCGATCACTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AGGTTACATCCGCGATGTACTCAGCGTGCGGGATT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACGTCGTTTTGGGTTGAGGTGCAGCCGTTGATGCCG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TATCATACATTCGCTGAAACTCGTGGAGCCTGCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CCGGTGGTGCCGCGACGTTTAGCGATCACAATTCCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TTGTATTGTGCCGCCAGTATCGCTCTTCCCCCTAGTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGTGAATCCGCCGCATGTGTGACGCGGCGCAATCCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTCTGTTTCGCTCGCTGCTGATGAAACTTACGAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCAGTCGTAAAGGTCGGGGCCGACACCGCCAAAGCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGCCGGCTTTAGTGAGGGCTTGGCCGCTGCGAC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AGCATTAGGCGACCCCGACCTGCTGCGGGTCATCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGTCGGCCATCTTGGAGCCCCCTGGACCGCATCTGCGCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GGTGGGCCGCGACGTCATCAAATGCGCGTCGTGCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTTCGCTTTGGTGCGCGGATAAGCGTTGGGGCACGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GGGGACCCCCCAACCGGCGCAGTGCTCGATGCGGCCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTCGCAGCGAGGCACCCCTAAGCGCGTAGCCGAGCGCCAG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TTGAACCGCTGCTGCTGCTCCGGCGAAAGAAGTTGAGGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTTTGACAACTGGCTGATGGGGCCGGTACGGGATGCG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTGAGTCTGCGGGCTTTTTCCGACCACTTGTGCGGGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGTGACGAATCCGCCGCCCCGTCGACCACCGCTCGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CCATAATTGGGTGGAAAAGGGGACGCGATAACCGCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGATCCCCTGGTATCCGTGCTCGGGATGCCCCAG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GGGCGAACCACGGAGGCGGCGCCTGCTAGTTTCACTGGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCCGGGCAGCCGTATCGCCCGTAGCTGTCCGCGCT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGGCCTGCAGTACGCTAAGGAGCAGGGCTTTATCAC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACGTGGTGGCGAAAGTTGCGCGCAGCCAAGTTATTTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TAAATGCCGGCCAGGAGTGTACTGCTCGTCCAGCCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGGTGCACCAGTCCGTCTGCTCGAAGTAGGCAGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGGCCGGGTTGGCGATATCGGAGCCGGTGCTGCTA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCTTGTAGAACAAGCATGTAATTGTGGAATGCAACCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGCCCTCGTAGGCGGCCCCGCTAGCAATCTCCTCGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CCGCACGTCGGCGCCTTCTGCTCGGCGCGCAAATAAATT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGTCTGCAGATCAGCTCGCGCACGGTCCAGCGCTGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTGGCGGACATCATCGACATCATGGCAAGTCCAGCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AAGTCCTCGACGCGTTCGCCATCACCGCGTCACCCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGGCCCGGGGTTGATGATGTGATGCGAATGTTGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGGGTCGCACCGTTGTCCATGAACCGCTGCTT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGTACATGGCGAGCTGCGCGCCGGTGGAATGCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGACTGCACTGCGAAACCGGGCCGGCCGTCGCATGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGCGACCGACATTTCCGGCACTGTCACCGACGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGTGTCGGCGTCGGGTGTCATCGTCGGCAGTTGCGGGCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CATCCGTCGGCCGGGGGGAATGGTTCGGCGCTC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CACTACTTCGCCGACCTCTTTCCGCGGGTGTCGTTAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCTTCCGCGGCATTTCCGCCCACACGGTGGTGATG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTTACATGCTTCATCATCGATCACGCCTTTCCCAT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTACACGTTCACGGTGCGCGGCGGAGCGGCTGGAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGGCGCTAACTTGGCTGGCGCTAGCCTGGTCAGTGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCGTACTAAGCGGGTTAGCACTGCTGGACCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTCGCCGGGGTCCGCGAAATGGTCGCTGCCGTCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGACGCAGATGGCGTATGGTGGCGCTTATGACGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGCGATGACCCAAACTGCGGAGGTGACTGGTGAGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC

>NZ_AP022575|9|4|2112276-2117449|CRT
CCGAACATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATCGCAGCAGGTTTCCGATGAGTGATGTTTTGCCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GAGCGCCGGCCGACAGGTCACCCGACAGGGTGATGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGGACACTGTCATTGGCGATGTCGAAAGCGAACTCAT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TTCACCACTGGCGATGCTGTAGTCGCGGCTGCCCCT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CACAGGGTTGGGGTTGCCGCCGCGCCCGTACAGCCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTTCTGACCTCCTGTGTGAGATGACTACGTGTCATCAATG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGGCCGGCCACACACGCAGCAGATGCCCTGCAGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CACTCCGCCTTGGCCGCCCGCGTCAACGAGGTTGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AGGCGAATCCGGATGGTTTGCACACCATTTGGCACGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTACACTATGCCCTGCCCTGACTGCGGTGCCCGCGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCGGCACCTCGTCGGCGAACCTGCTGATCGTGTCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCAAACCCCATCTGGTGCAGACTGCCACCAGTGGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTGCCCACTCGTTCGTCGTTTAGTGCCAGCAACAC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGAGACCGGCGATACGAGTGCGCGTCCACTGAGCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCCACCACGCCACTACGACTGCGCCGATACATCGGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCTGACGTTTCAATGGGGGGTTGACACACCCTAAT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGACCTGCGGCCTGTGGCTGCCGGTGTGGCTGATC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATTATCTGGCGCCAACACCGTCTCCGCCGATGACAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TACACCTTGGGCAAGTTCACCGCCCCCCAAGAGCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACGGTGCCGACCCTTGCGTCCCACGCGGGATGGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGACATCGACCCACCCGAAGGGATGCGATCACTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AGGTTACATCCGCGATGTACTCAGCGTGCGGGATT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACGTCGTTTTGGGTTGAGGTGCAGCCGTTGATGCCG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TATCATACATTCGCTGAAACTCGTGGAGCCTGCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CCGGTGGTGCCGCGACGTTTAGCGATCACAATTCCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TTGTATTGTGCCGCCAGTATCGCTCTTCCCCCTAGTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGTGAATCCGCCGCATGTGTGACGCGGCGCAATCCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTCTGTTTCGCTCGCTGCTGATGAAACTTACGAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCAGTCGTAAAGGTCGGGGCCGACACCGCCAAAGCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGCCGGCTTTAGTGAGGGCTTGGCCGCTGCGAC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AGCATTAGGCGACCCCGACCTGCTGCGGGTCATCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGTCGGCCATCTTGGAGCCCCCTGGACCGCATCTGCGCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GGTGGGCCGCGACGTCATCAAATGCGCGTCGTGCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTTCGCTTTGGTGCGCGGATAAGCGTTGGGGCACGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GGGGACCCCCCAACCGGCGCAGTGCTCGATGCGGCCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTCGCAGCGAGGCACCCCTAAGCGCGTAGCCGAGCGCCAG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TTGAACCGCTGCTGCTGCTCCGGCGAAAGAAGTTGAGGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTTTGACAACTGGCTGATGGGGCCGGTACGGGATGCG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTGAGTCTGCGGGCTTTTTCCGACCACTTGTGCGGGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGTGACGAATCCGCCGCCCCGTCGACCACCGCTCGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CCATAATTGGGTGGAAAAGGGGACGCGATAACCGCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGATCCCCTGGTATCCGTGCTCGGGATGCCCCAG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GGGCGAACCACGGAGGCGGCGCCTGCTAGTTTCACTGGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCCGGGCAGCCGTATCGCCCGTAGCTGTCCGCGCT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGGCCTGCAGTACGCTAAGGAGCAGGGCTTTATCAC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACGTGGTGGCGAAAGTTGCGCGCAGCCAAGTTATTTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TAAATGCCGGCCAGGAGTGTACTGCTCGTCCAGCCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGGTGCACCAGTCCGTCTGCTCGAAGTAGGCAGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGGCCGGGTTGGCGATATCGGAGCCGGTGCTGCTA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCTTGTAGAACAAGCATGTAATTGTGGAATGCAACCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGCCCTCGTAGGCGGCCCCGCTAGCAATCTCCTCGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CCGCACGTCGGCGCCTTCTGCTCGGCGCGCAAATAAATT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGTCTGCAGATCAGCTCGCGCACGGTCCAGCGCTGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTGGCGGACATCATCGACATCATGGCAAGTCCAGCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AAGTCCTCGACGCGTTCGCCATCACCGCGTCACCCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGGCCCGGGGTTGATGATGTGATGCGAATGTTGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGGGTCGCACCGTTGTCCATGAACCGCTGCTT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGTACATGGCGAGCTGCGCGCCGGTGGAATGCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGACTGCACTGCGAAACCGGGCCGGCCGTCGCATGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGCGACCGACATTTCCGGCACTGTCACCGACGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGTGTCGGCGTCGGGTGTCATCGTCGGCAGTTGCGGGCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CATCCGTCGGCCGGGGGGAATGGTTCGGCGCTC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CACTACTTCGCCGACCTCTTTCCGCGGGTGTCGTTAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCTTCCGCGGCATTTCCGCCCACACGGTGGTGATG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTTACATGCTTCATCATCGATCACGCCTTTCCCAT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTACACGTTCACGGTGCGCGGCGGAGCGGCTGGAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGGCGCTAACTTGGCTGGCGCTAGCCTGGTCAGTGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCGTACTAAGCGGGTTAGCACTGCTGGACCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTCGCCGGGGTCCGCGAAATGGTCGCTGCCGTCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGACGCAGATGGCGTATGGTGGCGCTTATGACGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGCGATGACCCAAACTGCGGAGGTGACTGGTGAGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC

>NZ_AP022575|9|3|2112348-2117449|PILER-CR
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GAGCGCCGGCCGACAGGTCACCCGACAGGGTGATGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGGACACTGTCATTGGCGATGTCGAAAGCGAACTCAT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TTCACCACTGGCGATGCTGTAGTCGCGGCTGCCCCT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CACAGGGTTGGGGTTGCCGCCGCGCCCGTACAGCCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTTCTGACCTCCTGTGTGAGATGACTACGTGTCATCAATG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGGCCGGCCACACACGCAGCAGATGCCCTGCAGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CACTCCGCCTTGGCCGCCCGCGTCAACGAGGTTGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AGGCGAATCCGGATGGTTTGCACACCATTTGGCACGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTACACTATGCCCTGCCCTGACTGCGGTGCCCGCGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCGGCACCTCGTCGGCGAACCTGCTGATCGTGTCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCAAACCCCATCTGGTGCAGACTGCCACCAGTGGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTGCCCACTCGTTCGTCGTTTAGTGCCAGCAACAC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGAGACCGGCGATACGAGTGCGCGTCCACTGAGCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCCACCACGCCACTACGACTGCGCCGATACATCGGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCTGACGTTTCAATGGGGGGTTGACACACCCTAAT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGACCTGCGGCCTGTGGCTGCCGGTGTGGCTGATC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATTATCTGGCGCCAACACCGTCTCCGCCGATGACAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TACACCTTGGGCAAGTTCACCGCCCCCCAAGAGCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACGGTGCCGACCCTTGCGTCCCACGCGGGATGGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGACATCGACCCACCCGAAGGGATGCGATCACTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AGGTTACATCCGCGATGTACTCAGCGTGCGGGATT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACGTCGTTTTGGGTTGAGGTGCAGCCGTTGATGCCG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TATCATACATTCGCTGAAACTCGTGGAGCCTGCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CCGGTGGTGCCGCGACGTTTAGCGATCACAATTCCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TTGTATTGTGCCGCCAGTATCGCTCTTCCCCCTAGTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGTGAATCCGCCGCATGTGTGACGCGGCGCAATCCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTCTGTTTCGCTCGCTGCTGATGAAACTTACGAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCAGTCGTAAAGGTCGGGGCCGACACCGCCAAAGCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGCCGGCTTTAGTGAGGGCTTGGCCGCTGCGAC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AGCATTAGGCGACCCCGACCTGCTGCGGGTCATCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGTCGGCCATCTTGGAGCCCCCTGGACCGCATCTGCGCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GGTGGGCCGCGACGTCATCAAATGCGCGTCGTGCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTTCGCTTTGGTGCGCGGATAAGCGTTGGGGCACGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GGGGACCCCCCAACCGGCGCAGTGCTCGATGCGGCCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTCGCAGCGAGGCACCCCTAAGCGCGTAGCCGAGCGCCAG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TTGAACCGCTGCTGCTGCTCCGGCGAAAGAAGTTGAGGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTTTGACAACTGGCTGATGGGGCCGGTACGGGATGCG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTGAGTCTGCGGGCTTTTTCCGACCACTTGTGCGGGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TGTGACGAATCCGCCGCCCCGTCGACCACCGCTCGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CCATAATTGGGTGGAAAAGGGGACGCGATAACCGCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGATCCCCTGGTATCCGTGCTCGGGATGCCCCAG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GGGCGAACCACGGAGGCGGCGCCTGCTAGTTTCACTGGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCCGGGCAGCCGTATCGCCCGTAGCTGTCCGCGCT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGGCCTGCAGTACGCTAAGGAGCAGGGCTTTATCAC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ACGTGGTGGCGAAAGTTGCGCGCAGCCAAGTTATTTG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TAAATGCCGGCCAGGAGTGTACTGCTCGTCCAGCCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGGTGCACCAGTCCGTCTGCTCGAAGTAGGCAGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGGCCGGGTTGGCGATATCGGAGCCGGTGCTGCTA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGCTTGTAGAACAAGCATGTAATTGTGGAATGCAACCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGCCCTCGTAGGCGGCCCCGCTAGCAATCTCCTCGGT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CCGCACGTCGGCGCCTTCTGCTCGGCGCGCAAATAAATT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGTCTGCAGATCAGCTCGCGCACGGTCCAGCGCTGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GTGGCGGACATCATCGACATCATGGCAAGTCCAGCAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	AAGTCCTCGACGCGTTCGCCATCACCGCGTCACCCA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGGCCCGGGGTTGATGATGTGATGCGAATGTTGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGGGGTCGCACCGTTGTCCATGAACCGCTGCTT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	GCGTACATGGCGAGCTGCGCGCCGGTGGAATGCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGACTGCACTGCGAAACCGGGCCGGCCGTCGCATGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGCGACCGACATTTCCGGCACTGTCACCGACGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	TCGTGTCGGCGTCGGGTGTCATCGTCGGCAGTTGCGGGCC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CATCCGTCGGCCGGGGGGAATGGTTCGGCGCTC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CACTACTTCGCCGACCTCTTTCCGCGGGTGTCGTTAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCTTCCGCGGCATTTCCGCCCACACGGTGGTGATG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTTACATGCTTCATCATCGATCACGCCTTTCCCAT
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTACACGTTCACGGTGCGCGGCGGAGCGGCTGGAA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGGCGCTAACTTGGCTGGCGCTAGCCTGGTCAGTGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CTGCGTACTAAGCGGGTTAGCACTGCTGGACCGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	CGTCGCCGGGGTCCGCGAAATGGTCGCTGCCGTCGG
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGACGCAGATGGCGTATGGTGGCGCTTATGACGA
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC	ATGCGATGACCCAAACTGCGGAGGTGACTGGTGAGC
GCCTCGATGAAGTGCGGCCGCCGAAACGGCCGCCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_142272181.1|2119529_2120555_-|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	gnl|CDD|187733
NZ_AP022575.1|WP_083051501.1|2124934_2126140_-|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	gnl|CDD|378223
NZ_AP022575.1|WP_163662916.1|2109184_2109997_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|225806
NZ_AP022575.1|WP_083048482.1|2105097_2105760_+|hypothetical-protein	unknown	unknown	gnl|CDD|374742
NZ_AP022575.1|WP_083051513.1|2129243_2129762_-|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl|CDD|234639
NZ_AP022575.1|WP_083051498.1|2123370_2124930_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl|CDD|274005
NZ_AP022575.1|WP_083048481.1|2106132_2106546_+|PIN-domain-nuclease	unknown	unknown	gnl|CDD|350322
NZ_AP022575.1|WP_083051504.1|2126746_2127193_-|prepilin-peptidase	unknown	unknown	gnl|CDD|224900
NZ_AP022575.1|WP_083052646.1|2111455_2112082_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083048479.1|2106584_2106842_+|CopG-family-transcriptional-regulator	unknown	unknown	gnl|CDD|279710
NZ_AP022575.1|WP_142272182.1|2120551_2123371_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl|CDD|274235
NZ_AP022575.1|WP_083051489.1|2117638_2117941_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_AP022575.1|WP_083048403.1|2106838_2107216_+|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350308
NZ_AP022575.1|WP_083048399.1|2108017_2108239_-|type-II-toxin-antitoxin-system-antitoxin-VapB20	unknown	unknown	gnl|CDD|279710
NZ_AP022575.1|WP_083048404.1|2105920_2106133_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl|CDD|227737
NZ_AP022575.1|WP_083048401.1|2107231_2107609_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083048400.1|2107628_2108021_-|PIN-domain-containing-protein	unknown	unknown	gnl|CDD|350247
NZ_AP022575.1|WP_083051510.1|2128009_2129251_-|endolytic-transglycosylase-MltG	unknown	unknown	gnl|CDD|224475
NZ_AP022575.1|WP_083051492.1|2117937_2119533_-|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187766
NZ_AP022575.1|WP_083051507.1|2127204_2128032_-|shikimate-dehydrogenase	unknown	unknown	gnl|CDD|273813

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP022575.1|WP_142272181.1|2119529_2120555_-|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	1e-88	292.5	0.3
NZ_AP022575.1|WP_083051501.1|2124934_2126140_-|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	1.2e-18	62.5	0.0
NZ_AP022575.1|WP_142272182.1|2120551_2123371_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	9e-90	296.3	0.4
NZ_AP022575.1|WP_083051489.1|2117638_2117941_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	3.7e-20	66.7	0.1
NZ_AP022575.1|WP_083051498.1|2123370_2124930_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	3.3e-76	251.9	15.5
NZ_AP022575.1|WP_083051492.1|2117937_2119533_-|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.4e-84	278.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_142272181.1|2119529_2120555_-|hypothetical-protein	gnl|CDD|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	3.30676e-85
NZ_AP022575.1|WP_083051501.1|2124934_2126140_-|type-I-U-CRISPR-associated-protein-Cas7	gnl|CDD|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.78718e-39
NZ_AP022575.1|WP_163662916.1|2109184_2109997_-|AAA-family-ATPase	gnl|CDD|225806	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].	3.1085e-101
NZ_AP022575.1|WP_083048482.1|2105097_2105760_+|hypothetical-protein	gnl|CDD|374742	pfam16708, LppA, Lipoprotein confined to pathogenic Mycobacterium. This is a family of lipoproteins found only in pathogenic mycobacteria. These pathogenic lipoproteins may play a role in host-pathogen interactions. Lipoproteins localized to the cell-envelope of pathogenic bacteria are major determinants of virulence. The proteins are localized to the cell-surface via an N-terminal lipidation carried out by a transferase - pro-lipoprotein diacylglyceryl transferase Lgt - which attaches a diacylglyceride molecule to a sulfur atom from a crucial cysteine, and a consecutively acting lipoprotein signal peptidase LspA that cleaves the signal peptide just before the modified cysteine. When the peptidase is inactivated the pathogen has difficulty in replicating inside macrophages.	1.76889e-37
NZ_AP022575.1|WP_083051513.1|2129243_2129762_-|Holliday-junction-resolvase-RuvX	gnl|CDD|234639	PRK00109, PRK00109, Holliday junction resolvase RuvX.	4.38921e-50
NZ_AP022575.1|WP_083051498.1|2123370_2124930_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl|CDD|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	1.4628e-64
NZ_AP022575.1|WP_083048481.1|2106132_2106546_+|PIN-domain-nuclease	gnl|CDD|350322	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC3 and VapC21 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.31508e-53
NZ_AP022575.1|WP_083051504.1|2126746_2127193_-|prepilin-peptidase	gnl|CDD|224900	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	3.08921e-11
NZ_AP022575.1|WP_083048479.1|2106584_2106842_+|CopG-family-transcriptional-regulator	gnl|CDD|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	4.73967e-05
NZ_AP022575.1|WP_142272182.1|2120551_2123371_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	1.41713e-86
NZ_AP022575.1|WP_083051489.1|2117638_2117941_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	9.34174e-19
NZ_AP022575.1|WP_083048403.1|2106838_2107216_+|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350308	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.02343e-39
NZ_AP022575.1|WP_083048399.1|2108017_2108239_-|type-II-toxin-antitoxin-system-antitoxin-VapB20	gnl|CDD|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	9.95052e-05
NZ_AP022575.1|WP_083048404.1|2105920_2106133_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl|CDD|227737	COG5450, COG5450, Transcription regulator of the Arc/MetJ class [Transcription].	0.000189889
NZ_AP022575.1|WP_083051510.1|2128009_2129251_-|endolytic-transglycosylase-MltG	gnl|CDD|224475	COG1559, COG1559, Aminodeoxychorismate lyase [Coenzyme transport and metabolism].	1.12698e-113
NZ_AP022575.1|WP_083048400.1|2107628_2108021_-|PIN-domain-containing-protein	gnl|CDD|350247	cd18680, PIN_MtVapC20-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC20 and related proteins. M. tuberculosis VapC20 inhibits translation by site-specific cleavage of the universally conserved Sarcin-Ricin loop in 23S rRNA. This subfamily belongs to the VapC (virulence-associated protein C)-like nuclease family of the PIN domain-like superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1.	2.54318e-52
NZ_AP022575.1|WP_083051492.1|2117937_2119533_-|CRISPR-associated-endonuclease-Cas4/Cas1	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	7.89489e-97
NZ_AP022575.1|WP_083051507.1|2127204_2128032_-|shikimate-dehydrogenase	gnl|CDD|273813	TIGR01809, Shik-DH-AROM, shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. [Amino acid biosynthesis, Aromatic amino acid family].	1.55949e-112

Protein sequences

>NZ_AP022575.1|WP_083052646.1|2111455_2112082_-|hypothetical-protein
MVTVEADVDLVERRLAAGELSCPFCGGVLAGWGRARARQLRGVDGPVELHPRRSRCTGCGVTHVLLPVTALLRRADTAAVVVSALVAKGASRVGFRRIAADVARPAETVRGWLRRFAERAEAVRSVFTVWLAAVAADPVMPDAAGGVFIDAVSAMVALAAAIGRRFSLPRVSLAEVAVAVSGGRLLAPGWPGEPVQHESTLPAARITP
>NZ_AP022575.1|WP_163662916.1|2109184_2109997_-|AAA-family-ATPase
MMDKLISYYGFSRIPFGRDLAPSMLHRHGAHNEAVARIGWCVADRRIGVVTGEVGAGKTVAVRAALTALDRSRHAVIYLPDPTVGVRGIHHRIVASLGGQPLTHHATLAPQAADALAAEQAERGRTPVVVVEEAHLLDYDQLEALRLLTNHDLDSSSPFACLLIGQPTLRRRMKLGVLAALDQRIGLRYAMPPMTDKETASYLRHHLALAGRDDTLFSDDAVTLVHQTSRGYPRAVNNLALQALVAAFAADKAIVDESSTRTAIAEVTAD
>NZ_AP022575.1|WP_083048399.1|2108017_2108239_-|type-II-toxin-antitoxin-system-antitoxin-VapB20
MKRLQIYIDEDVDRALAVEARRRRTSKAALIREYVAEHLRQPGPDPVDAFVGSFDGGADLSASVDDVVYGKRE
>NZ_AP022575.1|WP_083048400.1|2107628_2108021_-|PIN-domain-containing-protein
MIFADTSFWAALGNVGDARHGAAKRLWASKPPVVMTSNHVLGETWTLLNRRCGHRAAVAAAAIRFSTVVRVEHVTADLEEQAWEWLARHDEREYSFVDATSFALMRKKSIRNAYAFDGDFSAAGFVEVRP
>NZ_AP022575.1|WP_083048401.1|2107231_2107609_-|hypothetical-protein
MQPDSLEQRRVTALESRVRELADRVRASERDAAAARVLAGAADRDVTEFIGELRDFRRATIGSFNALREEMTERFSRVEDRFSRVEERFSRVDDGFTEMRGKLDGAAAGQQRIVELIERLIANQG
>NZ_AP022575.1|WP_083048403.1|2106838_2107216_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MKLIDTSVAVDHLRGEPAAAGLLAELVHNGEQIAASELVRFELLAGARETELAALEAFFSALTWTRVTEDIARLGGQLARRYRRSHSGIDDVDYLIAATALVVDADLLTTNVCHFPMFRDLQPPY
>NZ_AP022575.1|WP_083048479.1|2106584_2106842_+|CopG-family-transcriptional-regulator
MRTQVTLGAEELELLDRAAKASGASRSELIRRAIHSVYGTRSKQERLAALDHSRGSWQGRDFTGTDYVDAIRGDLNARLARLGLA
>NZ_AP022575.1|WP_083048481.1|2106132_2106546_+|PIN-domain-nuclease
MLFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSAKSATDYDALADELDGLARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTVVWHYDEDYDRVAAITGQPTEWIVPRGTL
>NZ_AP022575.1|WP_083048404.1|2105920_2106133_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MSRRTTIDIDDILLARAQAALGTTGLKDTVDAALRAAVRQSARTRLTARIASGAGIDRSEALLAQTRPVR
>NZ_AP022575.1|WP_083048482.1|2105097_2105760_+|hypothetical-protein
MITPQPLPRTLSRWQRIITLTMIGISTALIGGCTMDHNPDTSRRLTDEQKIQLIDSMRNKGSYEAARERLTATARIIADRISAAITGQTWKFTEDPAGRKADREGLSCKELTGDIARRPIADAVIFGTAFSAEDFKVVTNIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFRLLQIKFATLDIIGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
>NZ_AP022575.1|WP_083051489.1|2117638_2117941_-|CRISPR-associated-endonuclease-Cas2
MSRSDARRFLIAYDIPDDRRRDRLAKRLERHGDRVQYSVFVVDASPARIARLKNEISTIIVTALDSVLLCDLGLVQNVDHGRFAFIGRSRPIMTSGPIVT
>NZ_AP022575.1|WP_083051492.1|2117937_2119533_-|CRISPR-associated-endonuclease-Cas4/Cas1
MTAPDPLPISLVSHHVFCPRRAWLEAAGEQTDTYQMSVGELSHRATDNPANSRGGRHRSVDIAHPAWGITGRADAVEDHDGSLRVVEYKATPVRREAEPTDTMRVQLALQSACLEAMGHTVVEHGVYFTTHHKYVPVALSTKDFDAARAEVSKTRATLQSSTAPAPLEDDPRCMRCSHVGVCLPEERAQNPVIRRIHAADPDSQIIHLATSGSRASIRHGRLCVSARGEEVASFPLERVSGLVVHGNIDLSSALIRELLWRGLTIVWCSGTGRVIGWGHTANTPNGLARVRQHQASAEGRLALAREFIGAKIANQATLLRRNGDAPATVSYLRMLQRTALSAETLGALYGFEGEAAARYFASFSTMLRPRQAEVFLARWPGRAGRGALDPLNVALNFVYGVLVAETIRAVAACGLDPHAGFLHSSNRNKPALALDLMEEFRAPLGDAVVLTAINNGEITESGFSSALGSCRLRDSGRKALLSAYERRLATEFTHPVFKYKVTWRRAIEVQARMVLGYIDGSQAKYTGVATR
>NZ_AP022575.1|WP_142272181.1|2119529_2120555_-|hypothetical-protein
MSVFTPAGSITSALSHFALFGLAAICESELAVSARVWWTDERIPHPQLDAGREPRAVAEAVHRHATKRASPDSWLAAQLEHEERTTAAFSPRIKAPSSPSAWRHLQTTRHAALDRLVAGHNWLDLRMVGALGEPSYWLADKSPDGGASRWEMKTRNRGEEFVGNRLLPVANCVAARQVEEVLSGLTGGTINDEVARNQPDSRSATGFARPGPVDNALVWCTLWGISQFPVVHHTDAQSVTAGTYVPGKRTHPTFVFLPAPTRPTTLARLRTIIASMHLFVVGSVAQNSKPLDEIAAAVSRKWLADRGIRALIRFPVDVSDNPSAPERQVLDGVAIPLGGQL
>NZ_AP022575.1|WP_142272182.1|2120551_2123371_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MVLRTEDFDAFFAAFNDGHRPFAWQRRLFDELATTGCWPGRIIAPTGAGKSSVVDIHIFAVALSAMREIARVPRRLALVVNRRALVDNQAQRAQRIQESLNNAPPGSLLGKIATALRSLRIGDPTDSDHPVFDVVDLRGGVPPRRGWVADPSACQIICATPDMWGSRVLFRGYGTSRLARPREAGLLVYDAAIVLDEAHLNHQLLLTARRVAQFARSHSTAIGVPGLQVVETTATPTDSSFVDEERVEIRVESADIAGNDDELTRRLTTPKPVQRISAATWPPSRGGASRTQYIDVLVGETIRLHQEFGPTVGCVVNTVTLATDIATRLRSSGLLVELLVGRMRPYDRAVLESRRPNLLTVLGNPDVDVLVATQTLEVGVDIDFSALVTELAPASALAQRAGRVNRVGKVDRTEVVVIGPAPESPLLSANLDCKDRRALTVPPYVRTGDVDASEHVRRTWEWLGEREADPRGMSPWALTESQPPVQHPQRTLLQRLEPYDAWFLSRTGADLFDEPDLELWLRDSLEPDEVTSGVVARALLPVDDSAAIGLLSVTPPIQREIYPATLGTTRTLISSILSGNTDMAPRRAFLFRDNEIRPIGDTSDLKPGDIAIVDCRHKICTAGVVTPTPSEEGSDVFEDVVRQEGAKRVARFVAGMSDQVDRLLDDFADLIASSGGEFDDVEVAQLLYSYRDDDARLAMFTEDLRSNATNMSIDFGGLEDPESRWLVISVVQQPADVGESTQQVWTPSPSPVLLDAHNAAVAERARALALGVGLSAPLQDALSDAGRFHDVGKRDRRFQRFRLGNSEPDRYLLAKSHTGSIRQVARAQNAGGLPTQWRHEQLSAAIASTELDASDCRDLVLRLVGTSHGYGRPDFPHVSDGLLSCDEEGRVIQHAVKLFDIGDWDVVIESTHQCWGVWGCAYMEAILRAADGQVSAEGR
>NZ_AP022575.1|WP_083051498.1|2123370_2124930_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MAIGIEATFLLGTFTGHRPDGSPDQLPDPARLHAALLNAAGQGSTAVHDKSGLHASAKAIAALEWLDANPPTGIRLPRVYPVAALPITAFRREGVIRKEGGAWTDKIGGRPFSDGYAVDGPVGWCWDHGIPEAVRAALEELCADVGCLGEATSPVRLVVTDIEPTHSLDSGASIFVAGGTDLRVPTTGRTAALTAAHTTANGKSPSIAGDRHKTDENPSPPTPTRQAVESRRYRPRGAAPTDAPWATVVLLATARTIQPAHRVRWCTALHRALIARIGFGAPPLITGAYAKGVRQPANRLAIQFLPAGMLAQHGMASGAFALLIPSDASSEELAPLHHALTGLRRFSLEGRHAVLGTPVTVRGDEFWHPPLPGHARRWTTNPVAVPETSPQRRGHGVGGSRSRWTLRDAARVSVGLVWRDIVAPRRDSSRWFEEIAARTVDYGVKVHEARLLHTSDVAAWVHKTPKQILVQPYRATLSLGGLAADRTLVAIGQSRHLGGGLLVPVDSPADGFADPAEDA
>NZ_AP022575.1|WP_083051501.1|2124934_2126140_-|type-I-U-CRISPR-associated-protein-Cas7
MPTLDYSQLYEACSPGGSSAYISVTELAPAGGPHAGVAPARYVDGTKPTFAYETRFVDGKPVTTAILDSKQSQANRMEVAILNDIRDGHPIIGRVPRMQVTYFGGEAVFTDLELPHRAFDGHIRAGTVGGQPVTANPTFRSARDASPANARALLELSPGSLVFGAWDSTRKTRQGRYRSALVGEIIGVLASQDDRATNPPRRGGARVDPVGMSVQLVGDDLLAVMSDQSEELSPKLIDKIEKAAKRRGEKGNSGSVLGLGGIPPTLENLGVVACSRIIRTHVLSFAALRQLRFGSDSGGDVACRALLAAYALAGLARSDSELNLRANCDLVEKGPASVRLDARGGKHIALEALSIAGADELLAEALAEAERRANVDWHGQVFEVVGNPVIYSAATAESAEE
>NZ_AP022575.1|WP_083051504.1|2126746_2127193_-|prepilin-peptidase
MLAGTVLLWMAALCVYDIRQRRLPNTLTLPGAGVILLVAVFAGHGLPALAGAAALAGVYLLVHLAAPAAMGAGDVKLAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMVTPWGVRTLPHGPSMCVATAGAVGLIGSPLVEPGAISV
>NZ_AP022575.1|WP_083051507.1|2127204_2128032_-|shikimate-dehydrogenase
MSSTARASSAPNKAGVLGSPITHSRSPQLHLAAYRALGLHDWTYERIECGAEQLPGVVGGFGPEWVGVSVTMPGKFAALRFADEHTARADLVGSANTLVRTARGWRADNTDIDGVAGALGTVSGHALVLGSGGTAPAAVVALAELGVTGVTVVARNPDKAARLVDLGTRVGVPTRFCGLDDDRLAAEVAAAGVLVSTLPAGVASRYAGTLAAVPVLLDAVYDPWPTPLAAAVAAAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAMTCALAALD
>NZ_AP022575.1|WP_083051510.1|2128009_2129251_-|endolytic-transglycosylase-MltG
MGEHHRHRAQPVAVRPTRHRKTRADRRRAQRITRRRRVAGGFVGGLVVVVVVAAVVVGSKLWHVLSGSGDDYTGTGKRDIVIQIRAGDSTTAVGETLHDRGVVATVRAFVDAAHGNAAIALIQPGFYRMRTEIPAAAAVARLADPKNRVGKLVIPEGRQLDDTTDMKTNVVNPGILTLISQATCVDLDGNRRCVSVADLRAAVSKGTPTMLAVPPWAVEPVLELGNDHRRIEGLIAPGTFNVDPGASAQTILATLISAGAVEYMKSGLVDTAKALSLSPYDILVVASLVQQESNTQDFPKVAQVIYNRLREHRTLEFDSTVNYPLDRREVATSDADRAQRTPWNTYVSEGLPATAICSPGVDALRAAEHPQPGDWLYFVTIDTQGTTLFTRDYHQHLANIELAKHNGVLDSTR
>NZ_AP022575.1|WP_083051513.1|2129243_2129762_-|Holliday-junction-resolvase-RuvX
MGEAHRRPPDRPGDPDQDPGRGRRLGVDVGTVRIGVACSDPDGILATPVETVRRDRSDKHLRRLAALATERQAVEVIVGLPRTLADRTGAAARDAIELAEALAVRIAPTPVRLADERLTTVSAQRALRAAGVRARDQRSVIDQAAAVAILQGWLDERRTVLAARVAQEGADG

Crispr_ID: NZ_AP022575_10

• CRISPR_ID: NZ_AP022575_10
• CRISPR_location: 2852651-2853992
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 19 spacers

Consensus repeat of NZ_AP022575_10

Consensus_repeat	Method
GCCGCCGTNNCCGCCGNNGCCGCCG	CRT

spacers of NZ_AP022575_10

>10.1|2852676|26|NZ_AP022575|CRT
GCGCCATTGGTGCCATCGCCGCCATC
>10.2|2852727|26|NZ_AP022575|CRT
TTGCCGGTGGTCGTGGAGTTGCTGGT
>10.3|2852778|38|NZ_AP022575|CRT
GCACCGCCGGCGCCGCCGACACCGCCTATTTCGTCGGT
>10.4|2852841|47|NZ_AP022575|CRT
GCACCGCCGTTGCCGCCGTTGCCGTTGATGCCGGGGGCACCGCCGTA
>10.5|2852913|35|NZ_AP022575|CRT
AACCCCTTGGTGGCGTTGCCGCCGGCGCCGGCGTT
>10.6|2852973|20|NZ_AP022575|CRT
AAGTTGCCCTGGCCGCCGAA
>10.7|2853018|23|NZ_AP022575|CRT
CCGAAGGCGCCGTCACCGCCGCG
>10.8|2853066|20|NZ_AP022575|CRT
GAGTTCCCTTCGCCGCCGAT
>10.9|2853111|26|NZ_AP022575|CRT
ACGCCGCTGGCGCTGCTCCCGCCGTT
>10.10|2853162|23|NZ_AP022575|CRT
GGGCCGCTGACACTATCTCCTTT
>10.11|2853210|26|NZ_AP022575|CRT
GGGCCACCGAACCCGGTGCCGGCGTC
>10.12|2853261|38|NZ_AP022575|CRT
AGGCCGCCGGCGTGCGCGAATGCGGCGATGGAGCCGCT
>10.13|2853324|50|NZ_AP022575|CRT
AGGCCGCCGTTGATCAGGCCGGTACCACCGGCGCCGCCATTACCCCCCTT
>10.14|2853399|41|NZ_AP022575|CRT
TGGTTCAGCGCTCCGCCGCCGTTGCCGCCGTTGCCGGCGTT
>10.15|2853465|71|NZ_AP022575|CRT
TTGCCGCCGTTGCCGCCGGCCGCGCCGTCTTTGGCGACCCCACCGGCGGCTGGTATGGCGGATCCGCCGTT
>10.16|2853561|83|NZ_AP022575|CRT
TTGTGGGTGATGCCGTCGGCGCCGTCCAAACCCGTCAGGGAGCCGGTGCCGGCCTTGCCGCCGGTCCCGCCGACGCCGGCGTT
>10.17|2853669|86|NZ_AP022575|CRT
GTGCCAGGGAAGTCCGCTTTGCCGCCGCCCGGCAAGATGGTGCCGCTGTTGACGCCGTTTTCGCCGTTGCCGCCGTCACCGGCTTT
>10.18|2853780|86|NZ_AP022575|CRT
TTGCCGCCGGTGCCTGTGGTGCCGTCGGCGTACCCCTTCGCCTGCGCCTTGCCGCCCGTGCCGCCGTCACCGCCGGCGCCGCCCTT
>10.19|2853891|77|NZ_AP022575|CRT
TTACCGCCGTTCTCGCCGTTGGCATTGGGGCCGGCGCCGTCGGCGCCCCTTTCGCCGTCGCCGCCGTTGCCGCCCTT

CRISPR arrays and Neighbor proteins around NZ_AP022575_10

CRISPR arrays

The CRISPR arrays of NZ_AP022575_10

>merge|NZ_AP022575|10|2852651-2853992|CRT
GCCGCCCCTACCGCCGGCCCCGCCGGCGCCATTGGTGCCATCGCCGCCATCGCCGCCGTCACCGCCGGCGCCGCCGTTGCCGGTGGTCGTGGAGTTGCTGGTGCCGCCGTTGCCGCCGGCGCCACCGGCACCGCCGGCGCCGCCGACACCGCCTATTTCGTCGGTGCCGCCGTTGCCGCCGGCACCACCGGCACCGCCGTTGCCGCCGTTGCCGTTGATGCCGGGGGCACCGCCGTAGCCGCCGTCGCCGCCGGCGCCACCAAACCCCTTGGTGGCGTTGCCGCCGGCGCCGGCGTTGCCGCCGTTGCCGCCGGCGCCGGTGAAGTTGCCCTGGCCGCCGAAGCCGCCGTTACCGCCCTGGCCGCCGCCGAAGGCGCCGTCACCGCCGCGGCCGCCCGCGCCGCCGTGGCCGCCGGAGTTCCCTTCGCCGCCGATGCCGCCCTGGCCGCCGAAGCCACCAACGCCGCTGGCGCTGCTCCCGCCGTTGCCGCCGTTACCGCCGTTGCCGCCGGGGCCGCTGACACTATCTCCTTTGCCGCCCGGGCCGCCGGCGCCGCCCGGGCCACCGAACCCGGTGCCGGCGTCGCCGCCGGCGCCGCCATTGCCGCCGAGGCCGCCGGCGTGCGCGAATGCGGCGATGGAGCCGCTGCCGCCGGCGCCGCCGAAGCCGCCGAGGCCGCCGTTGATCAGGCCGGTACCACCGGCGCCGCCATTACCCCCCTTGCCGCCCGTGCCCTCGAAGCCGGCCTGGTTCAGCGCTCCGCCGCCGTTGCCGCCGTTGCCGGCGTTGCCGCCGTTGCGGCCGAAGCCGCCGTTGCCGCCGTTGCCGCCGGCCGCGCCGTCTTTGGCGACCCCACCGGCGGCTGGTATGGCGGATCCGCCGTTGCCGCCGTTACCGCCGTTGCCGCCGTTGTGGGTGATGCCGTCGGCGCCGTCCAAACCCGTCAGGGAGCCGGTGCCGGCCTTGCCGCCGGTCCCGCCGACGCCGGCGTTGCCGCCGTTACCGCCGTTACCGCCGGTGCCAGGGAAGTCCGCTTTGCCGCCGCCCGGCAAGATGGTGCCGCTGTTGACGCCGTTTTCGCCGTTGCCGCCGTCACCGGCTTTGCCGCCGTTGCCGCCGTTGCCGCCGTTGCCGCCGGTGCCTGTGGTGCCGTCGGCGTACCCCTTCGCCTGCGCCTTGCCGCCCGTGCCGCCGTCACCGCCGGCGCCGCCCTTGCCGCCGTTACCGCCGTTGCCGCCGTTACCGCCGTTCTCGCCGTTGGCATTGGGGCCGGCGCCGTCGGCGCCCCTTTCGCCGTCGCCGCCGTTGCCGCCCTTGCCGCCGTTGCCACCGTTGCCGCCG

>NZ_AP022575|10|5|2852651-2853992|CRT
GCCGCCCCTACCGCCGGCCCCGCCG	GCGCCATTGGTGCCATCGCCGCCATC
GCCGCCGTCACCGCCGGCGCCGCCG	TTGCCGGTGGTCGTGGAGTTGCTGGT
GCCGCCGTTGCCGCCGGCGCCACCG	GCACCGCCGGCGCCGCCGACACCGCCTATTTCGTCGGT
GCCGCCGTTGCCGCCGGCACCACCG	GCACCGCCGTTGCCGCCGTTGCCGTTGATGCCGGGGGCACCGCCGTA
GCCGCCGTCGCCGCCGGCGCCACCA	AACCCCTTGGTGGCGTTGCCGCCGGCGCCGGCGTT
GCCGCCGTTGCCGCCGGCGCCGGTG	AAGTTGCCCTGGCCGCCGAA
GCCGCCGTTACCGCCCTGGCCGCCG	CCGAAGGCGCCGTCACCGCCGCG
GCCGCCCGCGCCGCCGTGGCCGCCG	GAGTTCCCTTCGCCGCCGAT
GCCGCCCTGGCCGCCGAAGCCACCA	ACGCCGCTGGCGCTGCTCCCGCCGTT
GCCGCCGTTACCGCCGTTGCCGCCG	GGGCCGCTGACACTATCTCCTTT
GCCGCCCGGGCCGCCGGCGCCGCCC	GGGCCACCGAACCCGGTGCCGGCGTC
GCCGCCGGCGCCGCCATTGCCGCCG	AGGCCGCCGGCGTGCGCGAATGCGGCGATGGAGCCGCT
GCCGCCGGCGCCGCCGAAGCCGCCG	AGGCCGCCGTTGATCAGGCCGGTACCACCGGCGCCGCCATTACCCCCCTT
GCCGCCCGTGCCCTCGAAGCCGGCC	TGGTTCAGCGCTCCGCCGCCGTTGCCGCCGTTGCCGGCGTT
GCCGCCGTTGCGGCCGAAGCCGCCG	TTGCCGCCGTTGCCGCCGGCCGCGCCGTCTTTGGCGACCCCACCGGCGGCTGGTATGGCGGATCCGCCGTT
GCCGCCGTTACCGCCGTTGCCGCCG	TTGTGGGTGATGCCGTCGGCGCCGTCCAAACCCGTCAGGGAGCCGGTGCCGGCCTTGCCGCCGGTCCCGCCGACGCCGGCGTT
GCCGCCGTTACCGCCGTTACCGCCG	GTGCCAGGGAAGTCCGCTTTGCCGCCGCCCGGCAAGATGGTGCCGCTGTTGACGCCGTTTTCGCCGTTGCCGCCGTCACCGGCTTT
GCCGCCGTTGCCGCCGTTGCCGCCG	TTGCCGCCGGTGCCTGTGGTGCCGTCGGCGTACCCCTTCGCCTGCGCCTTGCCGCCCGTGCCGCCGTCACCGCCGGCGCCGCCCTT
GCCGCCGTTACCGCCGTTGCCGCCG	TTACCGCCGTTCTCGCCGTTGGCATTGGGGCCGGCGCCGTCGGCGCCCCTTTCGCCGTCGCCGCCGTTGCCGCCCTT
GCCGCCGTTGCCACCGTTGCCGCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_142272107.1|2823245_2824094_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|237907
NZ_AP022575.1|WP_083052308.1|2873127_2875764_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|340391
NZ_AP022575.1|WP_083050027.1|2826490_2827777_+|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341470
NZ_AP022575.1|WP_163663005.1|2840624_2850275_-|PPE-domain-containing-protein	unknown	unknown	gnl|CDD|366325
NZ_AP022575.1|WP_083050030.1|2827773_2829264_+|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|143421
NZ_AP022575.1|WP_083052280.1|2871821_2872409_-|ATP/GTP-binding-protein	unknown	unknown	gnl|CDD|225138
NZ_AP022575.1|WP_163663008.1|2857290_2868456_-|PPE-domain-containing-protein	unknown	unknown	gnl|CDD|366325
NZ_AP022575.1|WP_083050033.1|2868830_2871371_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224054
NZ_AP022575.1|WP_083052307.1|2872389_2872761_-|DUF742-domain-containing-protein	unknown	unknown	gnl|CDD|283084
NZ_AP022575.1|WP_142272110.1|2825484_2826507_+|Ldh-family-oxidoreductase	unknown	unknown	gnl|CDD|376860
NZ_AP022575.1|WP_083050022.1|2824297_2825359_+|6-bladed-beta-propeller	unknown	unknown	gnl|CDD|271328
NZ_AP022575.1|WP_083050019.1|2821847_2823290_+|MHS-family-MFS-transporter	unknown	unknown	gnl|CDD|340927
NZ_AP022575.1|WP_083050017.1|2820481_2821702_+|NADH:flavin-oxidoreductase	unknown	unknown	gnl|CDD|239201
NZ_AP022575.1|WP_083052284.1|2872738_2873131_-|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl|CDD|224929
NZ_AP022575.1|WP_083052290.1|2876412_2877057_-|nitroreductase-family-protein	unknown	unknown	gnl|CDD|380311
NZ_AP022575.1|WP_083052287.1|2875947_2876412_+|tRNA-(cytidine(34)-2'-O)-methyltransferase	unknown	unknown	gnl|CDD|223297
NZ_AP022575.1|WP_163663002.1|2829297_2840484_-|PPE-domain-containing-protein	unknown	unknown	gnl|CDD|366325
NZ_AP022575.1|WP_083050013.1|2819596_2820442_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl|CDD|237637
NZ_AP022575.1|WP_083050036.1|2871393_2871732_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|379873
NZ_AP022575.1|WP_142272222.1|2877055_2877490_+|TIGR03667-family-PPOX-class-F420-dependent-oxidoreductase	unknown	unknown	gnl|CDD|132706

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_142272107.1|2823245_2824094_-|LysR-family-transcriptional-regulator	gnl|CDD|237907	PRK15092, PRK15092, DNA-binding transcriptional repressor LrhA; Provisional.	6.16196e-34
NZ_AP022575.1|WP_083052308.1|2873127_2875764_-|sensor-histidine-kinase	gnl|CDD|340391	cd00075, HATPase, Histidine kinase-like ATPase domain. This superfamily includes the histidine kinase-like ATPase (HATPase) domains of several ATP-binding proteins such as histidine kinase, DNA gyrase B, topoisomerases, heat shock protein 90 (HSP90), phytochrome-like ATPases and DNA mismatch repair proteins. Domains belonging to this superfamily are also referred to as GHKL (gyrase, heat-shock protein 90, histidine kinase, MutL) ATPase domains.	4.86759e-18
NZ_AP022575.1|WP_083050027.1|2826490_2827777_+|iron-containing-alcohol-dehydrogenase	gnl|CDD|341470	cd08191, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like. This family contains iron-containing alcohol dehydrogenase (Fe-ADH) which catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. It is distinct from other alcohol dehydrogenases which contain different protein domain. Proteins of this family have not been characterized.	1.05122e-176
NZ_AP022575.1|WP_163663005.1|2840624_2850275_-|PPE-domain-containing-protein	gnl|CDD|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	6.01497e-87
NZ_AP022575.1|WP_083050030.1|2827773_2829264_+|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl|CDD|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NZ_AP022575.1|WP_083052280.1|2871821_2872409_-|ATP/GTP-binding-protein	gnl|CDD|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	7.66944e-63
NZ_AP022575.1|WP_163663008.1|2857290_2868456_-|PPE-domain-containing-protein	gnl|CDD|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	9.83824e-79
NZ_AP022575.1|WP_083050033.1|2868830_2871371_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.54711e-63
NZ_AP022575.1|WP_083052307.1|2872389_2872761_-|DUF742-domain-containing-protein	gnl|CDD|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	1.00462e-26
NZ_AP022575.1|WP_142272110.1|2825484_2826507_+|Ldh-family-oxidoreductase	gnl|CDD|376860	pfam02615, Ldh_2, Malate/L-lactate dehydrogenase. This family consists of bacterial and archaeal Malate/L-lactate dehydrogenase. L-lactate dehydrogenase, EC:1.1.1.27, catalyzes the reaction (S)-lactate + NAD(+) <=> pyruvate + NADH. Malate dehydrogenase, EC:1.1.1.37 and EC:1.1.1.82, catalyzes the reactions: (S)-malate + NAD(+) <=> oxaloacetate + NADH, and (S)-malate + NADP(+) <=> oxaloacetate + NADPH respectively.	1.94227e-117
NZ_AP022575.1|WP_083050022.1|2824297_2825359_+|6-bladed-beta-propeller	gnl|CDD|271328	cd14958, NHL_PAL_like, Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5). PAL catalyzes the N-dealkylation of peptidyl-alpha-hydroxyglycine, which results in an alpha-amidated peptide and glyoxylate. Amidation of the C-terminus is required for the activity of many peptide hormones and neuropeptides. The catalytic residues of PAL are located on several NHL-repeats. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	8.17369e-85
NZ_AP022575.1|WP_083050019.1|2821847_2823290_+|MHS-family-MFS-transporter	gnl|CDD|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.47967e-161
NZ_AP022575.1|WP_083050017.1|2820481_2821702_+|NADH:flavin-oxidoreductase	gnl|CDD|239201	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	2.72959e-113
NZ_AP022575.1|WP_083052284.1|2872738_2873131_-|roadblock/LC7-domain-containing-protein	gnl|CDD|224929	COG2018, COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only].	3.98466e-33
NZ_AP022575.1|WP_083052290.1|2876412_2877057_-|nitroreductase-family-protein	gnl|CDD|380311	cd02062, Nitro_FMN_reductase, nitroreductase family protein. Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.	1.17783e-30
NZ_AP022575.1|WP_083052287.1|2875947_2876412_+|tRNA-(cytidine(34)-2'-O)-methyltransferase	gnl|CDD|223297	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis].	7.63241e-77
NZ_AP022575.1|WP_163663002.1|2829297_2840484_-|PPE-domain-containing-protein	gnl|CDD|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	4.41034e-75
NZ_AP022575.1|WP_083050013.1|2819596_2820442_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	gnl|CDD|237637	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional.	0
NZ_AP022575.1|WP_083050036.1|2871393_2871732_+|FHA-domain-containing-protein	gnl|CDD|379873	pfam16697, Yop-YscD_cpl, Inner membrane component of T3SS, cytoplasmic domain. Yop-YscD-cpl is the cytoplasmic domain of Yop proteins like YscD from Proteobacteria. YscD forms part of the inner membrane component of the bacterial type III secretion injectosome apparatus.	1.12159e-07
NZ_AP022575.1|WP_142272222.1|2877055_2877490_+|TIGR03667-family-PPOX-class-F420-dependent-oxidoreductase	gnl|CDD|132706	TIGR03667, Rv3369, PPOX class probable F420-dependent enzyme, Rv3369 family. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN. [Unknown function, Enzymes of unknown specificity].	2.82085e-61

Protein sequences

>NZ_AP022575.1|WP_163663005.1|2840624_2850275_-|PPE-domain-containing-protein
MNFAVLPPEINSLLISTGAGSGPLLAAAAAWDELAAELGSAAASFGSVTSGLAGGVWQGPSAAAMAAAAAPYAGWLGATAAAAEAAAGQARAVVSVYEAALAATVDPFVVAANRSKLVSLALSNLFGQNTPAIAAAEFDYELMWAQDVAAMLGYHAGASAAAAALAPFAPPLGSPAAAADPKALTINLGLANVGSFNLGAGNIGSFNLGPGNIGSFNLGGGNVGSNNVGLGNVGLGNLGLANSGVAPGLMGLANIGFGNAGSANLGWANMGVGNIGFGNTGTGNIGIGLTGDNLTGIGGFNSGSGNVGLFNSGTGNVGFFNSGTGNVGLFNSGSHNTGIGNSGTSGWGLWNAGGFNTGLANTGNYNTGSFNTGSFNTGGFNPGSINTGWLNTGDINTGVANSGNVDTGFFLSGNYSNGVLLRGDYQGLLGLSTGLNILPKIPLRMDINGGVGAITIEPIHIIPEIPININETLYLGPLVVPPINVPAISLGATIPNLSIGPLKINPITLFPAQQVPDFTVTFTWPVSSITIPQIQQVALSPTPNPITLIGPIHINTGFSIPITISYTTPALTLFPNGVSIPDTPLSLSLGVTAGTDAFTIPGFSIPEQPLPLTINVVGHIDALSTPAITIDNIPLNLHATGSVGPVGIAGINVPASPGFGNSTTAPSSGFFNTGGGGVSGFGNVGAHTSGWFNQSPQTMQPLPGTVSGYFNAGTLVSGIGNVGTQVSGMLSGGPLGGGNIGSNNVGLGNIGFGNIGFGNSGLAPGLMGIGNIGLGNAGSDNLGLANMGVGNLGFGNTGNGNIGIGLTGDNLTGIGGFNSGSGNVGLFNSGTGNVGFFNSGTGNSGLFNSGSHNTGIGNSGMGNTGVFLTGDHTNGPAPFVPGPLFTISELPIELQVVGGIGPIHVQPIPIPAFDVQITGGFVGLREFTLPQITIPAIPVHVTGTVGLDGFHVSPTVLLSGMFANATISIAPLTLPSPFITIDHYGPPLGPPGNKFPTGSFYLSVTDLKINGPTISTDTVGPLFPIVVFAEVSTSPLTLFPNGISVPDQTPVTINLSGGLDSITVFPGGLAFPENPVVSLTDFAAGTGGFTVFPQGFTVDTIPVNLHTTLSIGPFPFRWDYIPPAPANGPIPAVPGGFGLTSGLVPLHFTLNGGIGPISIPTTTVLDALNPLLTVTGNLELGPFTVPDIPIPAIDFGLDGNVNLGFNAPATTILSGLDTTGFLDVSLIRIANIQTQPFKLYMSIGQTLFLFDFKSGVKLDPIVIGIPRIEFNMDPLQLTFPGTYSDSIPLNLSFGSPASTVKSMVLHEILPIDVSVGLEDAVSIPATVLPAIPLNVDVITPVGPINIPIITIPGSGGSTTTTPAPDPFSGVAVPGLGLGVLSLFDGSITAPLISGFSSAVGIVGPNLGLSNVGGGNIGFGNVGDFNIGSGNIGNFNIGLGTAGSVVGGVVGGVVGGVVGAIGGVPGSVVGSVIGGVAGSVVGGVVGVPFSGGNIGDFNLGSGNIGDVNLGSGNIGSNNVGLGNIGSGNVGFANSGEAPGLLGIGNIGFGNAGSANLGWANMGVGNIGFGNTGTGNIGIGLTGDNLTGIGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGNFNTGLANTGHYNTGSFNAGDANTGGYNPGNINTGWFNTGHTNTGVANPGNVNTGAFISGNYSNGFLWTGDYQGLLDFTYPAGDLIPFTYLVYLRETVNLGPIVIDPIPVHIPPLLDIDQTFEFGPYTVNPIPVQGIPLDYHETFDLGPLVIFPPMNIPATHINQAATAPGGPAPPPFVIPATGNVDLSIANFANGTPDLTFSGTLDPVTIQLGSAGPSFSVLDLSIPPIAIPGLTIPSLPLRIDVDGGIPGFTLFPDGLTFPKIPVHVDAFFGIPDFTIFPNGYTIDPIPLELNVDLTLGPISLSPLHNPAVPGFGNTTTAPSSGFFNTGAGGVSGFGNVGANVSGGWNQATQSLPGLASGFFNAGALGSGVLNFGSGVSGLVNTSTLDVGTSALVSGLGNVGHQLAGLSSAGTALNRGLIVNIGLADVGTGNVGFGNIGDFNLGSGNIGDVNLGSGNIGGNNVGFGNVGAGNVGFANSGAAPGLLGIGNIGLGNAGSGNLGFANMGVGNIGFGNTGTGNIGIGLSGDNLTGIGGFNTGSGNVGLFNSGTGNVGFFNSGTGNFGVFNSGSYNTGIGNSGTGSTGLFNAGNFNTGLANAGDYNTGSFNTGEANTGGFNPGSINTGWLNTGHTNTGVANPGTVGTGAFLSGNDSNGLLWRGNYQGLVGISYIPAVLPQTRFLDLTFTGGLGSVVIPAIDLPAIRAEFSADVAIASFTLPTIPIPRIDLDATTVSVGLGPITVPSLAIPKVPVTLNYLTGSQPGGPLRIGPITGEFQVGGLVPLTIGPVVIGGSSSQGTISAFLANLPYSTPVVTIDEIPLLASVTAHTEPIDIFPGGLTIPAMNPLSINLSGGTGAFTIPAITIPGIPFALEAHSTLGPIRIVLIDIPAVPGFGNTTTAPSSGFFNTGAGGVSGFGNVGANLSGWFNQVPSGLLGTASGFFNAGALGSGVLNFGSGVSGLVNTSTLDVGTSALVSGLGNVGHQLAGLSSAGTALNRGLIVNIGLADLGTGNVGFGNIGDFNLGSGNIGDVNLGSGNIGGNNVGFGNVGAGNVGFANSGAAPGLLGIGNIGLGNAGSGNLGFANMGVGNIGFGNTGTGNIGIGLSGDNLTGIGGFNTGSGNIGLFNSGTGNVGFFNSGTGNWGLFNSGSYNTGIGNSGMASTGWFNAGGFNTGLANAGGYNTGSFNTGDANTGGFNPGSINTGWLNTGHTNTGVANTGTVGTGAFLSGNDSNGLLWRGNYQGLVGFAYTATIIPEFTVANIHASGGAGPITIPSIHIPAIPLDLTATGQIGGFTIPSVSISPITVGINPVFDLGPITVQDITIPALGLDPASSITIGPSFSSGSIIDPFPLELLTVFKFTIGPIQTTPSQTLAFTVPLSSLGLTTLIPEFTIPGFHIPVDPIHIELPLSVTIGPFVSPEITVPQIPLGLALSGATPAFNFPPEITIDRIPVVLDVNAVLGPINAGFVIPAVPGFGNATTLPSSGFFNTGGGGLSGITNSGTGLSGVLNAIPNPLFGSASGLANFGTQLSGILNRGAGISGVYNTGTLGLITAAFNSGLFNVGQKLSGLLYTGTGP
>NZ_AP022575.1|WP_163663002.1|2829297_2840484_-|PPE-domain-containing-protein
MNFQVLPPEINSVLMYGGAGSGPWLAAAAAWDGLAAELGAAAASFESVTSGLVVGAAAMAAAAAPYAGWLGSVAAAAAEVAGQARVVVGVFEAALAATVDPALVAANRARLLSLAVSNVLGQNTPAIAAAEAEYELMWAADVAAMAGYHGGASAAAAALPGFGPPLQNLLGGANAFVNAVLADPSKVLSLNAGLANVGNYNAGLGNVGVFNLGAGNVGGQNLGFGNAGGNNVGFGNVGNGNVGFGNSGLGAGLAGLGNIGFGNAGASNYGLANMGVGNIGLANTGNNNLGIGLTGDNQTGFGGLNSGTANIGLFNSGTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVGNVGSYNTGSFNAGSTNTGGFNPGSVNTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGALWRGDYEGLWGLSAGGSTIPAIPIGLELNGGVGPITLLPIQILPTIPLNIHQTFTFGPLVVPDIVIPALGGGTAIPISVGPLTISPVTLFPAQNFNTTFPVGPFFGLGVVNISGIEIRDLAGNVTLQLGNLTIDTRINQQFPVTVNWNTPAITLFPNGISIPNNPLALLASASIGTPGFTIPGFTIPAAPLPLTIDISGQIDGFSTPPITIDRIPLNLGASVTVGPIVINGVNIPATPGFGNTTTAPSSGFFNTGAGGVSGFGNMGSGVSGWWNQTQSAVLGAGSGYANVGSLHSGVLNFGSGVSGLYNTTALMTPAAVSGIGNAGQQLSGLFSAGTALNRSFVINLGLADVGNHNIGFGNIGNVNLGAANIGDVNLGLGNIGGGNVGFGNIGNSNLGFGNSGLAAGLAGVGNIGLGNAGGNNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGSFNAGNTNTGAFNPGSINTGWFNIGNANTGIANSGTVNTGAFMTGNDSNGILWRGNFEGLVGAYLGFTIEQFPLTYHAVGGIGPLHVAPVPIPGVHFNITNASVGLGPFTIPEIHIPKIPIDVLGSVGLGQTTISAITALNPLNGGIGLSIGSFKFNNPFIGIANFGNPNPPVIGFFISNLSITGPQISGLNIGDPIPLSLGLGTTTWTLFPNGWTIPAQTPVNLGLSGGNDPFTFFPGGLTFPKASAGVTNLSGGTDPFTLLPDGFQIDTVPVLWDGTVLFGPIQIPIINVPPTPGFGNTTTTPSSGFFNSGDGGGSGFYNFGSAMSGWWNQAHSAASGAGSGFANFGSLDSGVLNWGSGVSGLYNTSGLPPGTPAVVSGIGNAGQQLSGLFSAGTALNRSFVINLGLADVGNHNIGFGNIGNVNLGAANIGDVNLGLGNIGGGNVGFGNIGNSNLGFGNSGLAAGLAGVGNIGLGNAGGNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGGFNAGNTNTGAFNPGSINTGWFNTGNANTGIANSGTVNTGAFIAGNDSNGILWRGNFEGLFGLNVGITIPEFPIHWTSTGGIGPIIIPDTTILPPIHLGITGQANYGFAVPDIPIPAIHIDFDGAADAGFTAPATTLLSALGITGQFRFGPITVSNVQLNPFNVNLKLQFLHDAFPNEFPDPTISVQIQVAIPLTSATLGGLALPLQQTIDAIELPGIAFSQSIPIDIPPIDIPASTINGISMSEVVPIDVSVDIPAVTITGARIDPIPLNFDVLTSAGPINISIIDIPALPGFGNSTELPSSGFFNTGGGGGSGIANFGAGVSGLLNQASSPMVGTLSGLGNAGSLASGVLNSGVDISGMFNVSTLGSAPAVISGFGNLGNHVSGVSIDGLLAMLTSGGSGGSGQPSIIDAAIAELRHLNPLNIVNLGNVGSYNLGFANVGDVNLGAGNVGNLNLGGGNLGGQNLGLGNLGDGNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNVGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSVNAGNTNTGGFNPGNVNTGWFNAGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDHHGLFGFSYSIEITGSTLVDINETVNLGPIHIDQIDIPGMSLFDIHELVNIGPFTIPQIDVPAIPLDIHESTVIPPIVFLPGMTIGGQTYTIPLNTPPAPAPPPFRLPLLFVNALGDNWIIGASNSTGMSGGFVTAPTQGILIHTGPSSGSTGSLAITFAAVTIPTIMTSPIPLKIDVSGGLPAFTLFPGGLNIPQNAIPLTIDASGVLDPITIFPGGFTIDPLPLSLALNISVPDSSVPIIIVPPTSGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHTAVLGAGSGVLNAGTLHSGVLNFGSGISGLYNTSILGLGTPALVSGLGNVGQQLSGVLASGTVLNQSLILNVGLADVGNYNLGLGNVGNLNLGAANIGDLNLGLGNVGNGNVGFGNIGHGNVGFANSGLGALPGIGNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNAGGFNTGLANAGSYNTGSFNAGDTNTGDFNPGSINTGWFNTGNSNTGIANAGNVDTGALMSGNFSNGILWRGNYEGLVSYTYGLDVPRITILDAHFTGAFGPVIVPPIPVPAINAHLTGNVAMGAFTIPQIDIPALQPNVTGSVGFGPIAVPSVAIPALNAARAVLDMAASVGASSETEPFIVWTSSGLIGPTWYAVGRSYSFGDLFPSGNITSGIPTLSTTGPVHAVFNAATQAFNTPALTLHQIPVGFQVPGSIDAITLFPGGLTFPANSLLNLDVFVGTPGATIPAITFPEIPANADGELYVIASNIPLINIPPTPGFGNTTTTPSSGFFNTGAGGGSGFGNFGANMSGWWNQAHTALAGAGSGIANAGTLSSGVLNLGSGLSGIYNTSTLPLGTPALVSGVGNVGQQLSGLLSGGSAVNPVTVLNIGLANVGNHNAGFGNVGEFNLGAANIGDLNLGLGNIGGGNLGFGNIGNANFGFGNSGLAAGLAGLGNIGFANAGSNNFGLANMGIGNVGLANTGTNNLGIGLTGDNQTGIGGLNSGTGNVGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGIANAGHHNTGSFNAGNTNTGDGNPGSINTGWFNTGNANTGVANAGNVNTGALIAGNFSNGILWRGNYEGLAGFSVGYAIPLFPAVGADVTGGIGPATIVPPIHIPSIPLGFAAIGAIGPITIPDIPIPSIHLGIAPTFDVGPITVDPITLTIPGFSVDAAISEIRMTAGSSSGFKVRPSFSPAAVGPDGTPGGEVSLLQPFTVGPIALNPTTVTLPGFTIPTGPIHIGLPLSLTIPGFTIPGGTLIPTLPLGLALSGGTPAFDIPTVVIDRIALELHGSTTIGPIHIPIFGFGGTPGFGNSTTTPSSGFFNTGGGGGSGFWNSGAGLSGWLNAMSDPMLGSASGFANFGTELSGILNRGAGMSGVFNTGTLGLVTAAFNSGFFNVGQRLSGLLYIGSGP
>NZ_AP022575.1|WP_083050030.1|2827773_2829264_+|NAD-dependent-succinate-semialdehyde-dehydrogenase
MTTFEDAARHTAVLESRAIPDTLFTELYIGGRWRPAELDERIEVRNPADGSLIAAVANATVTDCAAAVAAAADAAESWAVTPPRHRSEILRSAWEIMVAERESLAALITAENGKSYADAEAEIDYAADFFRWFAEEAVRIGGDYRLSPQGDKRILVSREPIGVAVLVTPWNFPAAMATRKLGPALAAGCTAILKPAIQTPLTAGAIVDILARAGVPAGVVNYVTPRPAGAAVRAMLHHPAVRKLSFTGSTEVGRLLLHEAADNIVSASLELGGNAPFLVLESADVGAAVAGAMVAKMRNGGCACTAANRFYVHRSLADAFTQGLVEAMRDTTMGPGLVAGNALGALISDAERDKVAAIVARAVDEGAVAVVGGQKPSGPGAFYPPTVLTGVRPDAAITQTEIFGPVAPIIVVDDEDEAVAWANRTEMGLVGYVYGDTASAMRVAHRLQVGMVAVNKGVLSDPAAPFGGVKQSGLGREGGSAGIEEYLEQKYIAVDL
>NZ_AP022575.1|WP_083050027.1|2826490_2827777_+|iron-containing-alcohol-dehydrogenase
MTAPANCPTATTPGFGLLRAPREVVFGPGARHALGRVLSGVGSRAFVCSDPIIATNPAFAEAISGISTRGVQVTVYTATQPELPLTSVASAAATARAVDPDVIVGFGGGSALDLAKLVSLALASDAPLSDFYGENLVRSRVLPVVAVPTTAGTGSEVTPVAVVADPSRSLKVGISSPELVPVAAIVDPELALTCPARVTAFAGIDALTHAIESYSARTPALDLSHTLPVFVGANRLSAPLGLEAAAALGPSIVRAVTDGSDIRARTDMAYGSMLAGLAFATAGTHLSHAIQYPVGEATRTPHGLGVGLLLPYVMEACLPAAAAQFARVGEAMGVTETGAGTDDAAAATIRFVVELRRRIGIPHTLAKIGLSRRELPHIIELASTVGRLVNNAPGADPRELIAPIVERAWAGNSDIFSAHDGIARGDPA
>NZ_AP022575.1|WP_142272110.1|2825484_2826507_+|Ldh-family-oxidoreductase
MHKIIAEVLTAYGALEGDAHVQARNLVEGDLRGQHSHGIQRLGVLVGRIRNGVLTPRAAPRQEWQTGAVLRVDGDRGFGPVVAFSAVQAIIDRAETTGVALAAIGNANHLGILAPYVEKMAAAGMVGIALTTSEALVHAWGGAAAMVGTNPIAIAAPTGPGSEPVVLDMSTGSVSMGKILSYAQRGEPIPLGWAVGPSGEPTTDAGLAARAGAISPFGGAKGYALGITVGAVVAAVTGTALGRDIRGTLDETSHCNKGDLLICISPHVLGSSHLLPAIGTYLNQVRASAVGADPVTVPGDRARACRQHRLRNGIPLHPNVWTTALRIHEQGRNHRNDRSR
>NZ_AP022575.1|WP_083050022.1|2824297_2825359_+|6-bladed-beta-propeller
MARGLALGIAVWLCLTSVATAAPAPADTPTNFLPNPYRTIANWGELPDGRTWGTTSAVAIGPDGATVWVAERCGETRTPDQIALGAPFACAGSTLDPILKFDTNGKLLGSFGAGMIVFPHAIHVDRDGNVWVADGLGYGGKGQQVLKFSPAGQLLLALGKAGTPGGGEDEFNSPSAVVTAPNGDIFVADGHGGNTNARIVKFDKTGKFIKQWGHKGSGPGEFDTPHTIAMDSAGRLFVGDRNNNRIQIFDQDGQFLNVWTQFSRPSGIYINNGIIYVTDSESESLATDHNGWKRGIRIGSVADGSVWALIPDPIDYATNTSGAEGLAVDAAGNIFGAEVGQHRMMKYVRESPP
>NZ_AP022575.1|WP_142272107.1|2823245_2824094_-|LysR-family-transcriptional-regulator
MTHVLDIIPLRSMVAVADYGGVHRAAAALHLTQSTVSQHLRRVEQAIGGPVVAKSGRGLVFTELGHRTLRHARAILAAHDDALAELGTTDEQTLAIGATEHGADVLIPGLTAALNERLPDRRVRFRLDRNVSLADSIERGLLDLVIMLDGSGLDRANPSGVVELSWLASQTFLAPVGQPLPLVVFAEPCVFREPTFAALDKAGVSYQVVAECANLAGLYAAVGSGLGVALVLTLGQLPAGVQPAEGLPAAHRISVFVRSRADIDPAVRSTVDEALRDMLGAR
>NZ_AP022575.1|WP_083050019.1|2821847_2823290_+|MHS-family-MFS-transporter
MSARNAMWPTRFNQSQRYLRRVVVASMAGTVVEWYEFSLYGTAATLVFSKVFFAPDGNDLDDVAAAFLTYAVGFFARPLGGIVFGQLGDRYGRKILLQLSLLLVGVATILMGCLPTFAQIGYAAPALLVALRFIQGFAIGGEWGGAVLLVAEHSPTASRSFWTSWPQAGVPGGNLLATVALLILTSTLPDRAFLSWGWRVAFWLSAIFVLIGYYIRTKVNDAPIFVEAQHQAQHAAAASVGLVEALKRYPRGVFTGMGLRFAENTMYFLVVTFAITYLTVQVHASTVAILWWLLTAHVVHLAVIPVAGHLADRFGRCPIYLVGVVTAGTWGFVAFPMMNSGRNAIIMSAFIIGLLFHGLMFAPLPAVMAEMFPTRIRYSAVSLSYQVTSIVSGSVAPIIAVRLLEKYQSWVPIAWYLAATAVVSTLAALSARETKGVDLTAIDFADAQSQSAPRQSLRPLSGACSALTRPEHVAQRLVDR
>NZ_AP022575.1|WP_083050017.1|2820481_2821702_+|NADH:flavin-oxidoreductase
MAAETAPRAAPAPDVFSPARLGPLTLRNRVIKAATFEARTPDALVTDDLIDYHRQPAAGGVGMTTVAYCAVSPGGRTGGGQIWMRPEVVPGLRRLTEAIHAEGAAVSAQIGHAGPVADARSNQATAVAPVRFFNPIAMRFAKKATRDDIDDVLAAHANAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGVVLAVRRAVGQRIAVTAKLNMADGIRGGITVEEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAGALKPPMRWGVRMMGHKFLREYPYRDAYLLREARLFRAELSIPLILLGGITNRETMDLAMAEGFEFVAMARALLAEPDLINRIAADGDRHTVKSACTHCNRCMPTIYRRTHCVVTGAPGRAR
>NZ_AP022575.1|WP_083050013.1|2819596_2820442_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase
MGAITLDGKATRDEILVDLTQRVAALTASGRAPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADTSQATLNETIDELNANPGCTGYIVQLPLPKHLDENAALERVDPDKDADGLHPTNLGRLVLNTPAPLPCTPRGIVHLLRRYDVEIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTATRDLPALTKQADIIVAAVGVPRLLTADMVRPGAAVVDVGVSRTESGLVGDVHPEVWEVAGHVSPNPGGVGPLTRAFLLTNVVERAERR
>NZ_AP022575.1|WP_163663008.1|2857290_2868456_-|PPE-domain-containing-protein
MSFQVLPPEINSVLMYGGAGSGPWLAAAAAWDGLAAEVGAAAASFEQVTSGLVVGGWQGVAAAAMAAAAAPYAGWLGSVAAAAEEVAGQARVVVGVFEAALAATVDPALVAANRAQLVQLALSNLLGQNTAAIAAAEAEYELMWAADVAAMAGYHGGASAAAAALPAFGPPAQALGGGVGAFLTTLFAGPAKVLSLNAGSGNVGNYNAGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNVGNGNVGFGNSGLGAGLAGLGNIGLGNAGSSNYGFANLGVGNIGFANTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGDTNTGIANSGNVNTGAFISGNFSNGVLWVGDYQGLFGFAGGPAIPAIPIGLVLNGDIGPITIQPIPILPTIPLSIHQTVNLGPLVVPDIVIPAFGGGIGIPINIGPLTITPITLFAQQTFVTQLPFPTFSLGKITIPQIQTFDSNGQLVSFIGPIVIDTTIPGPTNPQIDLTIRWDTPPITLFPNGISVPDNPLGLLASVSIETPGFTIPRFSVPAQPLPLTIDIEGQIDGFSTPPITIDRIPLTVGGGVTIGPITIQGLHIPAAPGVGNTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLGAGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANVGLTAGAAAVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGSFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTGLANAGTFGTGAFMTGDYSNGLLWRGGYEGLVGVRVGPTISQFPVTVHAIGGVGPLHVAPVPVPAVHVEITDATVGLGPFTVPPISIPSLPIASITGSVDLAANTISPIRALDPLAGSIGLFLEPFRLSDPFITIDAFQVVAGVLFLENIIVPGLTVSGQILVTPTPIPLTLNLDTTPWTLFPNGFTIPAQTPVTVGMEVANDGFTFFPGGLTFPRASAGVTGLSVGLDAFTLLPDGFTLDTVPATFDGTILIGDIPIPIIDVPAVPGFGNTTTAPSSGFFNTGGGGGSGFANVGAGTSGWWNQAHDVLAGAGSGVANAGTLSSGVLNVGSGISGWYNTSTLGAGTPAVVSGIGNLGQQLSGFLANGTVINRSPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNIGSGNVGFGNIGAGNVGFANSGPAVGLAGLGNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGHANTGIMNTGTRNTGALMSGTDSNGMLWRGDHEGLFGLSYGITIPQFPIRITTTGGIGPIVIPDTTILPPLHLQITGDADYSFTVPDIPIPAIHIGINGVVTVGFTAPEATLLSALKNNGNFISFGPITLSNIDIPPMDFTLGLPVLGPITGQLGPIHLEPIVVAGIGVPLEIEPIPLDAISLSESIPIRIPVDIPASVIDGISMSEVVPIDASVDIPAVTITGTTISAIPLGFDIRTSAGPIDIPIIDIPAAPGFGNSTQMPSSGFFNTGAGGGSGIGNLGAGVSGLLNQAGAGSLVGTLSGLGNAGTLASGVLNSGTAISGLFNVSTLDATTPAVISGFSNLGDHVSGVSIDGLIAILTFPPAESVFDQIIDAAIAELQHLDIGNALALGNVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGGGNLGFGNIGAGNFGFGNAGLTAGVAGLGNVGLGNAGSGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNTGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANVGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYHGLVGFSFSIDIAGSTLLDLNETLNLGPIHIEQIDIPGTSLFDVHEIVNIGPFTIPQVDVPAIPLEIHEAINMDPIVLVPATPIPAQTITIPLDIPASPGSTMTLPLIRMRFEGEDWILGSTAAIPNFGDPFPAPTQGITIHTGPSPGTTGELKISIPGFEIPQIATTRFLLDVNISGGLPAFTLFAGGLTIPTNAIPLTIDASGALDPITIFPGGYTIDPLPLHLALNLTVPDSSIPIIDVPPTPGFGNTTATPSSGFFNSGAGGVSGFGNVGSNLSGWWNQAASALAGSGSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSYNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTGIANSGNVGTGAFMSGNFSNGLLWRGDHEGLFSLFYSLDVPRITIVDAHLDGGFGPVVLPPIPVPAVNAHLTGNVAMGAFTIPQIDIPALTPNITGSAAFRIVVGSVRIPPVSVIVEQIINASVGAEMRIDPFEIWTQGTNGLGITFYSFGSADGSPYATGPLVFGAGTSDGSHLTISASSGAFTTPQLETGPITLGFQVPGSVNAITLFPGGVTFPATSLLNLDVTAGAGGVDIPAITWPEIAATADGSVYVLASSIPLINIPPTPGIGNSTTTPSSGFFNTGAGGGSGFGNFGAGTSGWWNQAHTAVAGAGSGLANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLAGGSAVNPVTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGFGNSGLTAGAGGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGNFNTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNTGNANTGVANAGNVNTGAVVTGNFSNGILWRGDYQGLAGFAVGYTLPLFPAVGADVSGGIGPITVLPPIHIPPIPVGFAAVGGIGPIAIPDISVPSIHLGLDPAVNVGSITVNPITVRTPPVLVSYSQGAVTSTSGPTSEIWVKPSFFPGIRIAPSSGGGATSTQGAYFVGPISIPSGTVTFPGFTIPLDPIDIGLPVSLTIPGFTIPGGTLIPTLPLGLALSNGIPPIDIPPIVLDRILLDLHADTTIGPINVPIAGFGGAPGFGNSTTLPSSGFFNTGAGGGSGFSNTGAGMSGLLNAMSDPLLGSASGFANFGTQLSGILNRGAGISGVYNTGALGVVTAAVVSGFGNVGQQLSGLLFTGVGP
>NZ_AP022575.1|WP_083050033.1|2868830_2871371_+|ATP-binding-cassette-domain-containing-protein
MPAPAPPALTVRYDGSERTFAAGHDVVVGRDLRADMRITHPLISRAHLLLRFDQGRWLAIDNNSLNGTFANGRRVPVVEIHDGQSVNIGNPDGPLLTFEVGRHLGRAGCPPQTESMPIVVPPPSGPPPAPPHPGAPPHPAARSGQPGPPEMPRYPSSSAPWPPAPPPSPRPGPDAQRPPIAAQPPVANLATKVFQALRTLTGPHPRPAGAVTIGRATDNDIVIQDVLASRQHAFLTSTPLGTEIRDAHSVNGTFVNGVRVGSAILTDGDVVTIGNVDLVFTRGTLVRRTEAATRTGGLEVNAVCFAVDGKQLLDNISLTARPGTLTAIIGGSGAGKTTLSRLIAGYTSPSSGTVTFEGHNIHAEYASLRSRIGMVPQDDVVHRQLTINQALGYAAELRLPPDTSTADRAQVVAQVLEELELTQHGDTRVDKLSGGQRKRASVALELLTGPSLLILDEPTTGLDPALDRQVMMMLRQLADAGRVVLVVTHSVAYLDVCDQLLLIAPGGKTAFLGPPSQIGAAMGTTNWADIFARVGADPDAANRRFLAAHRPPAFAPEAIPADLGEPVHTSVIRQFSTIARRQVRLVVSDRGYTVFLAVLPFLIGVLSLTVRGETGLGIAEAISSNPDQPGQILVMLNVGAVFMGTALTIRDLVGERPIFRREQAVGLATGAYLGAKIAVFSGFAIVQAAIATIITIVGWGSPPTDAVMLGGGDVGVGLELFVTVAATCVASAILGMALSALAQSQDQIMPMLVVSIMSQLVFSGGMIWVTDRFLLDQLSWATPARWGYAASSSTVNIEKLVPGPVKPKDQHWVHKPSAWLFDMAMLGVLSIVYGFIVWWKIRLRRR
>NZ_AP022575.1|WP_083050036.1|2871393_2871732_+|FHA-domain-containing-protein
MTRSQRPVLTVRSGHVGRSFAAGPDVVVGSDLHADFRVGHPLIAAAHLLLRFDRGGWIAVDNDSPSGIFVDGRKVASVDIHDGLAIALGRPDGPRITFEVEHHRGIIGLLPH
>NZ_AP022575.1|WP_083052280.1|2871821_2872409_-|ATP/GTP-binding-protein
MAYKHSEAHAEARGPASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRTTTVAMDFGRITLAEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPFLVAVNEFDGAPRYPVDEVRKALTLPRHIPVITVDARDRRSATDALIAVTEYALASLTPH
>NZ_AP022575.1|WP_083052307.1|2872389_2872761_-|DUF742-domain-containing-protein
MSSLPGARRELASLVRPYTLTAGRTASDVDLPLEAPLQTLPAGLSHRWPRHDVRGSIIRLCVNSPSVAEVAARLDVPVGVARVLAGDLVTSGYLRVRATLTDRSTRDERHELIGRTLRGLQAL
>NZ_AP022575.1|WP_083052284.1|2872738_2873131_-|roadblock/LC7-domain-containing-protein
MTTNSSPTHLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVASGLASLASGAAQLFEGGPVLQSVVEMQHGFLLLMRVGDGSHLATLAATGCDIGQIGYEMAILVERVGGVVQSSRR
>NZ_AP022575.1|WP_083052308.1|2873127_2875764_-|sensor-histidine-kinase
MFARPTTPVAAAAAKTPPSAEPTPKRPPAWSLRNWPVVWKVVAIGLVPLVVATALGAWRVRDAMTDASELRLVAARANLLPAITKYMSALDVAVLASSTGHDVEGAKKNFAARKYELQTRLADTDVIPDVRSAVNTLLNGGQALLDKVLDDSIGLRDRITSYAPLLLTAEDAITASVRVDGARIRAQLQGLSRAVGARGQMTMQEILVTRGADLSEPQLRTSMITLAGTEPSTLFGMTEALGAGSPDARNLQEQMVLRMAIMSDPAIALVDNPELLRSIQITKGIAEQVITDTTNSVPKALHGQASAARDATLRDAAVVAGVIAIALVIVLVVARALVGPLRVLRDGALKVAHTDLEGEIAAVRAGGEPSPQPLAVYTTEEIGQVAHAVDELHTHALLLAGDEARLRSLVNDMFETLSRRSRSLVDQQLALIDRLERHEQDPDRLDSLFRLDHLAARLRRNSANLLVLAGARVSGDHREPVALSTVINAAVSEVEDYRRVDIAGLPDCTVTGAAAGGVIHLLAELIDNALRYSPPTTRVRVSAVRGSEGGVLLRVADSGLGMTEADRRIANMRLQHGGGEVTPDNARHMGLFVVGRLASRHGIRVGLRGPATGEAGTGTTAEVYLPAAVLVGAAAAQPPNPRGGVFLVSPPRATADQRAPAAPAAASKPNGAGGPAPSVTLLPRRNPGASGITDIPAAERPRPPRRALPTPWWESGVSHPPAPAPARAPHQAPAEASQPARPAPRPSAAPGPAEDDVIYQRMLSEMAADPHELVSSPDLDWRTVWDRGWSAAAEAQDKPVESHTEHGLPVRTPGARLVPGAPSPDQQPDPRDQRAAADAAPQPARHPDAVRAALSSHFDGVRTARSHARDTDLQTDQQ
>NZ_AP022575.1|WP_083052287.1|2875947_2876412_+|tRNA-(cytidine(34)-2'-O)-methyltransferase
MFRLLFVSPRIAPNTGNAIRTCAATGCELHLVEPLGFDLSEPKLRRAGLDYHDLACVTVHPSLAQAWQALSPARVFAFTAQAATLFTDVGYRAGDVLMFGPEPTGLDEATLADPHVTARVRIPMLAGRRSLNLSNAAAVAVYEAWRQHGYPGAG
>NZ_AP022575.1|WP_083052290.1|2876412_2877057_-|nitroreductase-family-protein
MTLNLSVDEVLTTTRSVRKRLDFDKPVPREVLMECLELALQAPTGSNSQGWQWVFVEDADKKKAIADVYLANARGYLSGPAPEYPDGDTRGERMGRVRDSATYLAEHMHRAPVLLIPCLKGREDESPLGGVSFWASLFPAVWSFCLALRSRGLGSCWTTLHLLDDGERTVAQVLGIPYDTYSQGGLFPIAYTKGTDFRPANRLPAQTLTHWNGW
>NZ_AP022575.1|WP_142272222.1|2877055_2877490_+|TIGR03667-family-PPOX-class-F420-dependent-oxidoreductase
MWAGYRWAMSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPNAAKIAHITAHPQVSLNLDSDGNGGGIIVVGGTAVVDATDVDCRDDAPYWAKYRDDAAKFGLTEAIAAYSTRLKITPTRVWTTPTG

Crispr_ID: NZ_AP022575_11

• CRISPR_ID: NZ_AP022575_11
• CRISPR_location: 3048993-3049099
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP022575_11

Consensus_repeat	Method
ACATCACCCGGCTGGACCCGCCCCCGGGTCCGCACACC	CRISPRCasFinder

spacers of NZ_AP022575_11

>11.1|3049031|31|NZ_AP022575|CRISPRCasFinder
GACCAGCTGAAACGCGAAGAACGCGTTGTCG

CRISPR arrays and Neighbor proteins around NZ_AP022575_11

CRISPR arrays

The CRISPR arrays of NZ_AP022575_11

>merge|NZ_AP022575|11|3048993-3049099|CRISPRCasFinder
ACATCACCCGGCTGGACCCGCCCCCGGGTCCGCACACCGACCAGCTGAAACGCGAAGAACGCGTTGTCGACATCACCCGGCTGGACCCGCCCCCGGGTCCGCACACC

>NZ_AP022575|11|7|3048993-3049099|CRISPRCasFinder
ACATCACCCGGCTGGACCCGCCCCCGGGTCCGCACACC	GACCAGCTGAAACGCGAAGAACGCGTTGTCG
ACATCACCCGGCTGGACCCGCCCCCGGGTCCGCACACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083045962.1|3038033_3039044_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224052
NZ_AP022575.1|WP_163663262.1|3044303_3048194_-|alpha-mannosidase	unknown	unknown	gnl|CDD|223460
NZ_AP022575.1|WP_083052153.1|3063425_3064286_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|367049
NZ_AP022575.1|WP_083052162.1|3054483_3057528_-|protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_AP022575.1|WP_142271821.1|3034027_3037546_-|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
NZ_AP022575.1|WP_083045966.1|3041902_3042472_-|50S-ribosomal-protein-L10	unknown	unknown	gnl|CDD|234632
NZ_AP022575.1|WP_083045963.1|3039192_3040698_-|carotenoid-oxygenase-family-protein	unknown	unknown	gnl|CDD|226196
NZ_AP022575.1|WP_083052152.1|3064294_3065158_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|367049
NZ_AP022575.1|WP_083045965.1|3041478_3041871_-|50S-ribosomal-protein-L7/L12	unknown	unknown	gnl|CDD|234671
NZ_AP022575.1|WP_083045961.1|3030036_3033987_-|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
NZ_AP022575.1|WP_158084807.1|3058352_3060605_-|protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_AP022575.1|WP_083052159.1|3057910_3058198_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083045968.1|3043695_3044307_-|malonyl-CoA-ACP-transacylase	unknown	unknown	unknown
NZ_AP022575.1|WP_083052155.1|3061120_3062467_+|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl|CDD|223733
NZ_AP022575.1|WP_083045967.1|3042769_3043690_-|ROK-family-protein	unknown	unknown	gnl|CDD|224851
NZ_AP022575.1|WP_163663029.1|3067056_3067668_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|367049
NZ_AP022575.1|WP_163663025.1|3049422_3054138_-|PE-domain-containing-protein	unknown	unknown	gnl|CDD|376422
NZ_AP022575.1|WP_142271823.1|3040769_3041486_+|WHG-domain-containing-protein	unknown	unknown	gnl|CDD|379115
NZ_AP022575.1|WP_083052700.1|3066716_3067148_-|transposase	unknown	unknown	unknown
NZ_AP022575.1|WP_083052154.1|3062466_3063372_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083045962.1|3038033_3039044_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224052	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism].	7.21019e-125
NZ_AP022575.1|WP_163663262.1|3044303_3048194_-|alpha-mannosidase	gnl|CDD|223460	COG0383, AMS1, Alpha-mannosidase [Carbohydrate transport and metabolism].	3.5643e-83
NZ_AP022575.1|WP_083052153.1|3063425_3064286_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|367049	pfam02353, CMAS, Mycolic acid cyclopropane synthetase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.	1.26852e-147
NZ_AP022575.1|WP_083052154.1|3062466_3063372_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.1001e-23
NZ_AP022575.1|WP_142271821.1|3034027_3037546_-|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NZ_AP022575.1|WP_083045966.1|3041902_3042472_-|50S-ribosomal-protein-L10	gnl|CDD|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	3.68487e-64
NZ_AP022575.1|WP_083045963.1|3039192_3040698_-|carotenoid-oxygenase-family-protein	gnl|CDD|226196	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	3.2279e-163
NZ_AP022575.1|WP_083052152.1|3064294_3065158_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|367049	pfam02353, CMAS, Mycolic acid cyclopropane synthetase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.	7.29217e-166
NZ_AP022575.1|WP_083045965.1|3041478_3041871_-|50S-ribosomal-protein-L7/L12	gnl|CDD|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	1.83096e-41
NZ_AP022575.1|WP_083045961.1|3030036_3033987_-|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NZ_AP022575.1|WP_158084807.1|3058352_3060605_-|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.17562e-75
NZ_AP022575.1|WP_163663029.1|3067056_3067668_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|367049	pfam02353, CMAS, Mycolic acid cyclopropane synthetase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.	2.21949e-66
NZ_AP022575.1|WP_083052155.1|3061120_3062467_+|AarF/ABC1/UbiB-kinase-family-protein	gnl|CDD|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	6.70537e-152
NZ_AP022575.1|WP_083052162.1|3054483_3057528_-|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.88918e-77
NZ_AP022575.1|WP_083045967.1|3042769_3043690_-|ROK-family-protein	gnl|CDD|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.23679e-67
NZ_AP022575.1|WP_163663025.1|3049422_3054138_-|PE-domain-containing-protein	gnl|CDD|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	5.06206e-31
NZ_AP022575.1|WP_142271823.1|3040769_3041486_+|WHG-domain-containing-protein	gnl|CDD|379115	pfam13305, WHG, WHG domain. This presumed domain is around 80 amino acids in length. It is found to the C-terminus of a DNA-binding helix-turn-helix domain. This domain may be involved in binding to an as yet unknown ligand that allows a transcriptional regulation response to that molecule. The domain is named WHG after three conserved residues near the C-terminus of the domain.	5.11511e-11

Protein sequences

>NZ_AP022575.1|WP_163663262.1|3044303_3048194_-|alpha-mannosidase
MVSHFHYDPVWWNTQGAYTSRWREDPPGRARQANGFELVRAHLEMARREPEYKFVLAEVDYLKPYWDTHPEDRADLRRLLAQGRVEVMGGTYNEPNTNLTSPETTIRNLVHGMGFQRDVLGADPATAWQLDVFGHDPQFPGMAADAGLTSSSWARGPHHQWGPALGGPEAGGVDRMQFSSEFEWISPSGRGLLTHYMPAHYSAGWWMDSSTSLAEAEAATYALFEQLKTVALTRNVLLPVGTDYAPPNKWVTAIHRDWAARYTWPRFVCGLPREFFAAVRAELAQRGAMPSPQTRDMNPIYTGKDVSYIDTKQANRAAENAVLEAERFAVFAALMTGAQYPQAALAKAWVQLAYGAHHDAITGSESDQVYLDLLTGWRDAWELGRAARDNSLRLLSGAVAGPDDRVVVWNPLTGRRTDIVTARLDPPLDAGVRVVDPDGDELPAHVEHGGRTVTWLARDVPSLGWRAYRLIPADGPAGWEPAAGVEIANEQYRLAVDPERGGAVRSLVCAGRELIARGRVGNELAAYEEYPAHPTQGEGPWHLLPKGPVVCSSEWPAEVQAYHGPLGQRLVVWGRMGALLRYTQTLTLWRGVARLDCRTTIDGFTGHDRLLRLRWPCPVPGAMPVSEVGDAVVGRGFALLHDGAESVDTARHPWTLDNPAYRWFGLSSAARVRVGGTALRAVSVAEVVCPSEATSGPMARDLMIALVRAGVTATCSGADKPRYGHLDVDSNVPDTRIALGGPARNVFTKAVLADADPVYVAELERQLADTGRARVWVPAAAPLVAVWVPGADVRAPCALPVLIIDGRDDTSLAAAIAAVVDDLGDAEIAVTQQAPAPAEPFEARTVALLNRGVPSFAVDCAGTLHAALMRSCTGWPSGVWIDEPRRTAPDGSSFQLQHWTHVFDYALICGDGDWRDAEVCARGAQFSQPLLAVTPCTGLGRLPRQGSLLHVEPAGAVHLGALKAAGNPLTAGRAEPVDPAAVALRLVETTGAGSRVVVGSELGTIRALRLADLRETPLQRAWSTELHGYQLATVLARLDLPAVPSGPRELAPHTERAQPLYARYWLHNRGPAPLGGLPAVAYLRPQAVTAEPAAEVVLRLTAASDCTDSVLTGTVELVCPDGWSAAPAKLPFTLCAGGYLDADVVLAIPAQARPGHYPVRAQLGLSGEVPAAWQQVVEDVCVVTLGTAEPPELVYLVEGPADVEVAAGDSARLSVTVGSHACANLTVEAHLISPWGTWEWVGPAVQGADLPPGGTVELVFDVTPPPWWQPGRWWALIRVGAAGWLVYSPAVSVTVT
>NZ_AP022575.1|WP_083045968.1|3043695_3044307_-|malonyl-CoA-ACP-transacylase
MSLVATVAGAPVAVDEVDAREARLRSGPCAARWPASGTSEGRQLRRWLTQLIVTERVVAVEAAARGLGAADAPTEAEVLPDVTARLELGSIAAAALADPLARALFADVTAAVQISDAEVADYHARNPLRFAQRRPGRDGWCTPTVSAPPLERVRPVINEHLLGAARRRAFRIWLDARRAALVRLAPGYEHPGDPRQPDNTHRH
>NZ_AP022575.1|WP_083045967.1|3042769_3043690_-|ROK-family-protein
MRTLCLDIGGTKIAAGLADTAGVLLHTATRPTPARRDPEGVWAAVAAMIADALRVAGGTVGAVGIASAGPVDLRAGTVSPINIPGWRGFPLRDRVTDLVPGVPVRLGGDGVCMALGEHWRGAGRGARFLLGMVVSTGVGGGLVLDGAPYDGRTGNAGHVGHVVVDQDGEPCACGGRGCVETVAAGPAMVRWARANGWAAAPDAGARELADAAEAGDAVALAAFRRGARGVAAMIASVGAVCDLDLVVVGGGVAKSGRLLFDPLRAALSDYARLDFLAGLRVVGAQLGGEAGLVGAARLATMTFGRR
>NZ_AP022575.1|WP_083045966.1|3041902_3042472_-|50S-ribosomal-protein-L10
MAKADKATAVADIAARFKASTAAVITEYRGLTVANLAQLRRSLGESASYAVAKNTLIKRAASEAGIEGLDELFAGPTAIAFVTGEPVDAAKTIKTFAREHKALVIKGGYMDGHPLSVADVERIADLESREVLLAKLAGAMKGNLAKAAGLFTAPASQMARLAAALQEKMAAEAPGTPADTAAAEPASDQ
>NZ_AP022575.1|WP_083045965.1|3041478_3041871_-|50S-ribosomal-protein-L7/L12
MAKLSTDELLDAFKEMTLLELSDFVKKFEETFEVTAAAPVAVAAVGAAPAGAAAEAVEEQTEFDVILEAAGEKKIGVIKVVREIVSGLGLKEAKDLVDSAPKPLLEKVAKEAADEAKAKLEAAGATVTVK
>NZ_AP022575.1|WP_142271823.1|3040769_3041486_+|WHG-domain-containing-protein
MTSPTGVRDELLQAAVGLLNEHGPDALQTRKVAGAAGTSTMAVYTHFGGMRGLIAAVAEEGLRQFDAALTLPSTADPVGDLLAVGIAYRRYAIERPHMYRLMFGSTSAHGINAPAHNVLTLTIAQIEQQHPSFAHVVRAVRRSMLAGRLAAAGSADDDATVVAVAAQFWALVHGFVMLELAGFYGDDDDTAVEPVLASMTANLLVALGDSAEQVKRSQRSAVVAGGTRKPRGSRAATT
>NZ_AP022575.1|WP_083045963.1|3039192_3040698_-|carotenoid-oxygenase-family-protein
MTAAHTAAPLNPYLDGFLAPVGAEVTATDLPVTGHIPDHLDGRYLRNGANPVAQVDPAIYHWFSGDGMIHGVALRGGQARWYRNRWVRSPSVCAALGEPAPTRINPRAGMLALGANTSVLAHAGKTLALVEAGVATYELTDELDTVGTCDFDGTLAGGYTAHPHRDPRTGELHAVSYSFARGNTVQYSVIDTRGRARRTVDIEVGGSPMMHNFSLTDKYVVIYDLPVTFDPAQVLPATMPRWLRLPAQLVMQSLIGRVRVPGPIAALVNRNERPSDRLPYAWNPRYQARIGVMPRDGGNGDVRWFDIEPCYVYHPLNAYSEVRDGSEVLVLDVVRYSRMFDRDRRGPGGDSLPRLDRWTINLATGAVSTERRDDRPQEFPRINETRLGGRHRFGYTVGIEGGFFAQDSSQMVTWLYKQDYVTGSTTVAALDPNLLIGEMAFVPNPSANAEDDGVLMGYGHHRGRDEGQLLLLDAQTLESMATVHLPQRVPMGFHGTWAPTA
>NZ_AP022575.1|WP_083045962.1|3038033_3039044_-|ABC-transporter-ATP-binding-protein
MGVAIEVNGLTKSFGSSRIWEDVTLTIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSIIIDGTDIIECSAKELYEIRTLFGVLFQDGALFGSMNLFDNTAFPLREHTKKKESEIRDIVMEKLALVGLGGDEKKFPGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTAYLSQLIMDINAQIDATILIVTHNINIARTVPDNMGMLFRKHLVMFGPREVLLTSDEPVVRQFLNGRRIGPIGMSEEKDEATMAEEQALLDAGHHAGGVEEIEGVPPQITATPGMPERKAVARRQARVREMLHTLPKKAQVAILDDLEGTHKYHSSEFAG
>NZ_AP022575.1|WP_142271821.1|3034027_3037546_-|DNA-directed-RNA-polymerase-subunit-beta
MADFRQSNTDASPSQSRPQSSSNGSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFEWLIGSPRWREAALARGDVNPIGGLEEVLYELSPIEDFSGSMSLSFSDPRFDDVKAPVDECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDETIDKSTEKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSEQITERFGFSDIMMSTLEKDNTVGTDDALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLHPGEPIGTTTLTEEDVVATIEYLVRLHAGQPTMCVPGGVEVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVRDGIVTDEIEYLTADEEDRHVVAQANSPIDADGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAERSGVIEEVSADYITVMADDGTRHTYRLRKFARSNHGTSANQTPIVDAGDRVEAGQVIADGPCTQNGEMALGKNLLVAIMPWEGHNYEDAIILSNRLVEEDILTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSREDDDELAAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKIDTSGGVPDWAAKLPEELLAAEPNAIVSTPVFDGAREEELQGLLSATLPNRDGDVLVDGDGKAVLFDGRSGEPFPYPVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIELREGEDEDLERAAANLGINLSRNESASVEDLA
>NZ_AP022575.1|WP_083045961.1|3030036_3033987_-|DNA-directed-RNA-polymerase-subunit-beta'
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLEKIIYFAAYVITSVDEEMRHNELSTLEAEMAVERKAVEDQRDAELEARAQKLEADLAELEAEGAKADARRKVRDGGEREMRQIRDRAQRELDRLEDIWNTFTKLAPKQLIVDENLYRELVDRYGEYFTGAMGAESIQKLIENFDIDAEAEALREVIRNGKGQKKLRALKRLKVVAAFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDLGAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQRPQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQMAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEVPGDTGEYRSAAPDRPESGVYSSPAEAIMAADRGVLSVRAKIKVRLTQLRPPAEIEEELFGRNGWRPGDPWMAETTLGRVMFNELLPLGYPFVNKQMHKKVQATIINDLAERYPMIVVAQTVDKLKDAGFYWATRSGVTVSMADVLVPPRKKEILDQYEERADKVEKQFQRGALNHDERNEALVEIWKEATDEVGQALREHYPDDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPVKSSFREGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCQTERGIVVELAERAPDGTLIRDPYIETSAYARTLGTDAVDEAGNVIVERGQDLGDPEIDALLAAGITQVKVRSVLTCTTSTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGEDITGGLPRVQELFEARVPRGKAPIADVSGRVRLEDGERFYKITIVPDDGSEEVVYDKLSKRQRLRVFKHEDGSERVLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVREVQEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLIDRAEFEAENRRVVAEGGEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLHGLKENVIIGKLIPAGTGISRYRNIVVQPTEEARAAAYTIPSYEDQYYSPDFGAATGAAVPLDDYGYSDYR
>NZ_AP022575.1|WP_163663025.1|3049422_3054138_-|PE-domain-containing-protein
MSFVIASTELIAAAAEDLADIGSTIGTANAAVAAATTEVLAAGADEVSTRIAALFGGYGLEYQTVSAQLAAYHQQFVQTLRAGTDAYLAADTANAAAVDPNLLRIINAPTQALLGRPLIGDGANATTPGGNGGAGGLLFGNGGNGAPGDPGQAGGAGGAAGLWGNGGAGGAGGSGGATGGAGGAGGWLFGVGGPGGSGGPGGGTGGAGGPGGLLWGGGGIGGSGGYGGGTGGPGGRAPLLFGAGGVGGAGGAGTDAGPGGTGGPGGQGGVGGDGGWLTPGGAGGVGGIGGMGGRGSDGGAVGGTGGQGGLGGAGGAGGRGALLFGAGGQGGLGGAGGVGGYGGNGGEGALAGLGGVGGTGGTGGVGGIAGPGGAGGAGQFLSASGAPGAAGVGGTGGQGGTGGAGAAGTDAPAGSGLTGGSGFAGGAGGNGGAGGNAIAGGINGSGGAGGVGGRGGTGGAGGSGADNPTGVGGTGGAGGTGGAAGAGGVGGAAGTGGYGGSVGATGKAGIGGTGGQGGAGGAGGNGTDAPAGSGLVGGTGFAGGAGGAGGAGGDGGPDGTGGVGGAGGVGGAGGQGGAGADSVDPLVAGAAGGQGGAGGAGGAAGLGGAGSTIGAAGTAGDGGTGGGGGTGGKGADNITIAAPGAQGGTGGTGGAGGQGGEGGAAGAANGGTAGQQGAGGRGGAGGAGGAGGVGGAGADSVDPLVAGGAGGRGGTGGAGGAAGLGGAGSTIGAAGVGGAGGRGGDGGQGGAGATGTAGSGAAGGHGGDGGGGGTGGAGGAAGPGGTAGAGGAGGNGAKGGDGANGATNSAAGGAGGNGGNGGKGGAAGAGGSGATPGANGVAGDGGKGGDGAPGTTGTTGLGHGGHGGTGGNGGNGGTGGAGGDGIGGVGGGDGGDGGNGGDGGTGGAGGNAAGMTGTNGNNGGDGGNGGNGGNAGAGGAAGSGGGAAGANGTGGDGGDGGAAGAATAGGNGGAGTGTDGGTGGNGGKGGAGGAGGDGIGGVGGGAGGNGADGADGGVGGNGGSGVVAANTGGTGGNGGKGGTGGDGGAAGAGGAGGGANGTAGNGGQGGAGGNGGAGATSSTANGGNGGNGGKGGEGGGGGTGGDGVGGVGGGDGGQGGNGGHGGAGANGNNRNLSGGTGAGGQGGAAGNGGTGGHGGAGGGNGGKGGDAGDGGAGGKGGSGTTITTPGGKGGAGGSSGTGGDGGNGGDGGGNGGQGGNAGTGGRGGDGGTGGGSGGSGGRGGDTGNGGNGGQGGNGGGNGGQGGNAGTGGRGGNGGTGNNNYGGGSGGFGGSSGTGGDGGDGGDGGGAGGQGGNGGTGGRGGNGGSVSSGDGDSGTGGRGGSGGNGGRGGAGGAGGGDGGHGGNAGNGGNGGTGGNDNSTTGNGLIGAGGNGGAGGTGGAGGSGTDGGNGGNGGNGGDGGTGGTGGSISDTSPSGLPAGNGGNGGTAGNGGDGGTGKIGGNGGKGGNGGKGGTGGNASGPGRGGNGGTGGDGGRGGNGGIGDITGGFGGGGGNGGNGGDGGTGGRGDEGSNGTTGSSGEAGGEPAGALGGLGGFGGKGGKGGEGGSEFP
>NZ_AP022575.1|WP_083052162.1|3054483_3057528_-|protein-kinase
MVGNAAATQRAVGITARLRARGFDDAEELGRGRFGAVYRCTQVALDRQVTVKVLTTRLDEGRARFIREQKAMARLTGHPNILPLLEIGETDDGFPYLVMPYCRNGSIQSRISRLGSLPLDEVLRLGVKIADALQTAHRLGILHRDVKPANILLTDYGEPALGDFGIARVAVGVDTETGAHLGPPAFSAPELLDGDLPSAASDVYGLGASLFAGLTGHAPFERHEGGRVMSQLVRVADEPLSSLCALGLPADVAAAIDHAMAQNPSDRPTALEFGEALQQTQAGHGLAVDKMPVHDGAEPLRGLPQRWSGASHAGGKVPALLAGIVGRGAELAQLRGLLSASRLVTVTGVGGVGKTTLATAAAHQLDTQFADGVWWVELGDLRDGALVTDVMAARLGLRAHAGRAMTDVMVDFLRDRHTLVVLDNCEHVIDDVAKLVEALLHHCSQLHVVATSREMLNIDGEAMLALVPLKCPALDDDRLTVHTLAGYDAVALFIARALGALPSFTLTTDNAMAVAGICARLEGLPLALELAAARLRVLSAMQIADGLADRFALLQRGQRGAPTRQQTLTGCMHWSYELCTPAEKRFWSQLSVFAGTFDLAAVQHISTDGLNAEDLSAEPCIDIVSALVEKSILIRIERDDGSVRFRLLDTLRDYGQTKLTAHDFHQLHRRHAQHYQHLVAQANTEWFGPRQIEWLHRLKDEIPNLRAVLQFSMTDDPAAALELATNLRRLWTTCGMLSEARRWLDLALTAVPTDPTARRIKALVSAAAVANMQVDLTAARNLIAEARTLLEVVDDPLLHAEVDCVEGWCATLSGDVPRAHNCLQRALSASDDYELQAVSMLSMGWVLGLSGEHEQAANWFEKALALAESNGEVVYRSRALACLCSNEGRLSQTQWEQWAKPLLREGLHIARLINDPWTGAQCLERLASIALSNHDPRGAVVLMAAASAVRRATGTPVTAFAHLQALHDECERRAREALDSADFAAAWTEGNSLRFHEAVDVALDEAGTGLSTRR
>NZ_AP022575.1|WP_083052159.1|3057910_3058198_-|hypothetical-protein
MFTWVTSKSTDCSRELLQSSEFRHPCAHRLLSDHSYRTGRYQRRFLAALDTRMIDVGLVTDEQRPSIWTLRVDAVAKAPKAPGQDGFRRIAFGKP
>NZ_AP022575.1|WP_158084807.1|3058352_3060605_-|protein-kinase
MRSGVAAELYAAGFDDAVEIGRGGFGVVFSCTQVELDRMVAVKVLTTEADDNRLRFMREQKAMGRLTGHPNIVAVLQVGETDSGHLFLVMPYYRRGSLQQQISRLGVLALEDVLSVGVKLAGALESAHQLGIVHRDVKPANILITDYGEPALSDFGIARVTSAYTTATGVYSGTPAYSAPEVLGGAAPTAASDVYGLGATLFTTLTGHAAFERRADEQVMAHFLRIISEPVPDLREHGIAGEVAAVIDQAMAHDPSARPSARELGERLQLLQSQQGLVVDEMALQAGDGVKVPARRSVTGAALPRSVGNLPTVVSQVVGRGAELAELRTLVAASRLVTLTGPGGVGKTALAISAGAELGRSFPDGVWLAQLGELRDGSLLVEVVAMALGVHDRGGRPLTAVLADAMSERHALLVLDNCEHVVNEVAELVHALLRDCPRLHIVATSREVLNVAGEAVLVVPPLECPDAAEDPTLPTLAGYAGVELFVQRARATVAGFALTEHNATAVARICSRLDGLPLAIELAAARLRAMSADQIAEALSDRYTLLSRGHRGAPVRQQTLAGCVGWSYELCSRAEQELWGRLSVFAASFDLPAAHHICGPDVTAGEYLDQLSALVDKSILMRTEHQETARFRLLDTLRDYGAARIGPPEKAQLQRRHAHWYRQLVSDARAQWNGPHQIQWLHRLIQELPNIREALQYSVVDDWAAALEMTTALYPFWDARGMLSEGQRWTDLALSAARGSPQRAAHPGPR
>NZ_AP022575.1|WP_083052155.1|3061120_3062467_+|AarF/ABC1/UbiB-kinase-family-protein
MSSTKHREVVKLDRVPLPVEAARVAATGWQITRTFARVVTKLPGKGSWQQKVLKEIPQTFADLGPTYVKFGQIIASSPGAFGESLSREFRGLLDRVPPADTDEVHRLFVEELGDEPAKLFASFDEEPFASASIAQVHYATLHSGEEVVVKIQRPGIRRRVAADLQILQRFAQAVELAKLGRRLSAQDVVADFADNLAEELDFRLEARSMETWVSHLHTSPLGRNIRVPQVHWDFTTERVLTMERVHGIRIDDAAAIRKAGFDGVELVKALLFSVFEGGLRHGLFHGDLHAGNLYVDKAGRIVFFDFGIMGRIDPRTRWLLRELVYALLVKKDHAAAGKIVVLMGAVGTMKPEAQAAKDLERFATPLTMQSLGEMSYVDIGRQLSALADAYDVKLPRELVLIGKQFLYVERYMKLLAPKWQMMSDPQLTGYFANFMVEVSREHQSDVEV
>NZ_AP022575.1|WP_083052154.1|3062466_3063372_+|alpha/beta-hydrolase
MEVRSGIAASGEVKLYYEDMGDPDHPPVLLIMGLGAQMLLWRTDFCARLVGQGLRVIRFDNRDVGLSTKTEQHDFRQPVVTRLVRSWLGLPSQAPYTLEDMAGDAAALLDHLDVARAHVVGASMGGMIAQIFAARFAERTKTLAVIFSSNNHRFLPPPAPRALLALIKGPPPDSPRDVILDNAVRVSRIIGSPRYPIPEEQVRADAAECYDRNFHPWGMARQFSAILGSGSLLHYDRRIVAPTVVIHGRADKLMRPFGGRAVARAIDGARLVLIDGMGHDLPMQLWDRVIGELTKNFAEAG
>NZ_AP022575.1|WP_083052153.1|3063425_3064286_+|class-I-SAM-dependent-methyltransferase
MAELTPYYEESQAAYDISDEFFGLFLDPTWVYTCAYFERDDMTLEEAQLAKMDLALDKLNLQPGMTLLDVGCGWGGAVVRAVEKYDVNVIGITLSRNHYQRSKERLAAIPTTRRAEARLQGWEEFNEKVDRIVSFEAFDAFKKERYAAFFERSYEILPDDGRMLLHSLFTYDRRWLHEQGIPLTMSDLRFLKFLRESIFPGGELPSEPDIVDNALAAGFSLERTQVLQQHYARTLDMWAANLAAARERAIALQSEKVYDNFMHYLTGCAERFRRGLINVAQFTLTK
>NZ_AP022575.1|WP_083052152.1|3064294_3065158_+|class-I-SAM-dependent-methyltransferase
MANELTPHFADVQAHYDLSDDFFRLFLDPSQTYSCAYFEREDMTLEEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMRRAIEKYDVNVIGLTLSKNQAAHVQTLFDQLDSPRTTRVLLNGWEQFDEPVDRIVSIGAFEHFGHDRYADFFALAHKILPADGVLLLHTITGLTGPQVAERGLPMTFEMARFIKFIVTEIFPGGRLPSIEMVQEQSAKAGFTLTRRQSLQPHYAKTLDLWAAALQAHQEEAIRIQSEEVYQRYLKYLTGCAKMFRVGYIDVNQFTLAK
>NZ_AP022575.1|WP_083052700.1|3066716_3067148_-|transposase
MTIASLDSRADTGVVEGTRDPGARARRRTFTAEYKARILDEYDALPAGSERRGALLRREGLYSSHIAEWRKARDAGARKGLAPRGKKPKRTAEQIELEKLRRRNELLEAELERTKLALEITGKAHALLEMLSESADSDPKSKP
>NZ_AP022575.1|WP_163663029.1|3067056_3067668_+|class-I-SAM-dependent-methyltransferase
MNVRRRARAPGSRVPSTTPVSARLSKDAIVIVTWNSDPVSPCSDDRLLPLSHLTLAHRGFERYDDFFRFAYHALPTDGVMLLHAVTALHVKQVIERGIPLTMEMAKFIRFIVTEIFPGGRLPMIETVDEHSTKEGFTLTGVQSLQPHFARTLDLWAEALAAHKDEAVTIQSEEVYQRYMRYLTGCAKAFRMGYIDCNQFTLAK

Crispr_ID: NZ_AP022575_12

• CRISPR_ID: NZ_AP022575_12
• CRISPR_location: 3071316-3071420
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP022575_12

Consensus_repeat	Method
CAGGCCGTGCCGGCCTGCATCGTC	CRISPRCasFinder

spacers of NZ_AP022575_12

>12.1|3071340|57|NZ_AP022575|CRISPRCasFinder
GCCCGACGATACCGATGGTTCCGGCGCTCCCCCGCAGAGCGGGAGGTACACCCACCT

CRISPR arrays and Neighbor proteins around NZ_AP022575_12

CRISPR arrays

The CRISPR arrays of NZ_AP022575_12

>merge|NZ_AP022575|12|3071316-3071420|CRISPRCasFinder
CAGGCCGTGCCGGCCTGCATCGTCGCCCGACGATACCGATGGTTCCGGCGCTCCCCCGCAGAGCGGGAGGTACACCCACCTCAGGCCGTGCCGGCCCGCATCGTC

>NZ_AP022575|12|8|3071316-3071420|CRISPRCasFinder
CAGGCCGTGCCGGCCTGCATCGTC	GCCCGACGATACCGATGGTTCCGGCGCTCCCCCGCAGAGCGGGAGGTACACCCACCT
CAGGCCGTGCCGGCCCGCATCGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083050840.1|3067739_3068636_+|hydroxymycolate-synthase-MmaA4	unknown	unknown	gnl|CDD|367049
NZ_AP022575.1|WP_083050845.1|3069480_3069912_-|50S-ribosomal-protein-L11	unknown	unknown	gnl|CDD|234661
NZ_AP022575.1|WP_083052153.1|3063425_3064286_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|367049
NZ_AP022575.1|WP_083050842.1|3068705_3069416_-|50S-ribosomal-protein-L1	unknown	unknown	gnl|CDD|180071
NZ_AP022575.1|WP_083052152.1|3064294_3065158_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|367049
NZ_AP022575.1|WP_083050876.1|3079793_3083072_+|exodeoxyribonuclease-V-subunit-beta	unknown	unknown	gnl|CDD|273172
NZ_AP022575.1|WP_083050850.1|3070717_3071212_-|preprotein-translocase-subunit-SecE	unknown	unknown	gnl|CDD|236066
NZ_AP022575.1|WP_083050865.1|3073621_3073837_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl|CDD|227737
NZ_AP022575.1|WP_083050859.1|3072591_3073071_-|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadA	unknown	unknown	gnl|CDD|237473
NZ_AP022575.1|WP_083050873.1|3076497_3079794_+|exodeoxyribonuclease-V-subunit-gamma	unknown	unknown	gnl|CDD|273633
NZ_AP022575.1|WP_083050862.1|3073120_3073288_-|50S-ribosomal-protein-L33	unknown	unknown	gnl|CDD|234783
NZ_AP022575.1|WP_163663029.1|3067056_3067668_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|367049
NZ_AP022575.1|WP_083050848.1|3069969_3070686_-|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl|CDD|180161
NZ_AP022575.1|WP_142272148.1|3073878_3074685_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293833
NZ_AP022575.1|WP_083050853.1|3071660_3072161_-|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadC	unknown	unknown	gnl|CDD|139768
NZ_AP022575.1|WP_083050868.1|3074764_3075550_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083050870.1|3075682_3076378_+|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl|CDD|235744
NZ_AP022575.1|WP_083052700.1|3066716_3067148_-|transposase	unknown	unknown	unknown
NZ_AP022575.1|WP_083050856.1|3072176_3072605_-|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadB	unknown	unknown	gnl|CDD|184249
NZ_AP022575.1|WP_083052154.1|3062466_3063372_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083050840.1|3067739_3068636_+|hydroxymycolate-synthase-MmaA4	gnl|CDD|367049	pfam02353, CMAS, Mycolic acid cyclopropane synthetase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.	6.12629e-162
NZ_AP022575.1|WP_083050845.1|3069480_3069912_-|50S-ribosomal-protein-L11	gnl|CDD|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	3.17233e-92
NZ_AP022575.1|WP_083052153.1|3063425_3064286_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|367049	pfam02353, CMAS, Mycolic acid cyclopropane synthetase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.	1.26852e-147
NZ_AP022575.1|WP_083050842.1|3068705_3069416_-|50S-ribosomal-protein-L1	gnl|CDD|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.66589e-142
NZ_AP022575.1|WP_083052152.1|3064294_3065158_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|367049	pfam02353, CMAS, Mycolic acid cyclopropane synthetase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.	7.29217e-166
NZ_AP022575.1|WP_083050876.1|3079793_3083072_+|exodeoxyribonuclease-V-subunit-beta	gnl|CDD|273172	TIGR00609, RecBCD_enzyme_subunit_RecB, exodeoxyribonuclease V, beta subunit. The RecBCD holoenzyme is a multifunctional nuclease with potent ATP-dependent exodeoxyribonuclease activity. Ejection of RecD, as occurs at chi recombinational hotspots, cripples exonuclease activity in favor of recombinagenic helicase activity. All proteins in this family for which functions are known are DNA-DNA helicases that are used as part of an exonuclease-helicase complex (made up of RecBCD homologs) that function to generate substrates for the initiation of recombination and recombinational repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_AP022575.1|WP_083050850.1|3070717_3071212_-|preprotein-translocase-subunit-SecE	gnl|CDD|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	1.13418e-20
NZ_AP022575.1|WP_083050865.1|3073621_3073837_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl|CDD|227737	COG5450, COG5450, Transcription regulator of the Arc/MetJ class [Transcription].	9.37184e-08
NZ_AP022575.1|WP_083050859.1|3072591_3073071_-|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadA	gnl|CDD|237473	PRK13692, PRK13692, (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional.	7.48709e-108
NZ_AP022575.1|WP_083050862.1|3073120_3073288_-|50S-ribosomal-protein-L33	gnl|CDD|234783	PRK00504, rpmG, 50S ribosomal protein L33; Validated.	1.02388e-20
NZ_AP022575.1|WP_163663029.1|3067056_3067668_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|367049	pfam02353, CMAS, Mycolic acid cyclopropane synthetase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.	2.21949e-66
NZ_AP022575.1|WP_083050848.1|3069969_3070686_-|transcription-termination/antitermination-protein-NusG	gnl|CDD|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	1.74844e-92
NZ_AP022575.1|WP_142272148.1|3073878_3074685_+|MBL-fold-metallo-hydrolase	gnl|CDD|293833	cd16275, BaeB-like_MBL-fold, Bacillus amyloliquefaciens BaeB and related proteins; MBL-fold metallo hydrolase domain. Bacillus amyloliquefaciens BaeB may play a role in the synthesis of the antibiotic polyketide bacillaene. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	4.48312e-76
NZ_AP022575.1|WP_083050853.1|3071660_3072161_-|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadC	gnl|CDD|139768	PRK13691, PRK13691, (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional.	8.53762e-123
NZ_AP022575.1|WP_083050870.1|3075682_3076378_+|crotonase/enoyl-CoA-hydratase-family-protein	gnl|CDD|235744	PRK06213, PRK06213, crotonase/enoyl-CoA hydratase family protein.	1.3325e-117
NZ_AP022575.1|WP_083050873.1|3076497_3079794_+|exodeoxyribonuclease-V-subunit-gamma	gnl|CDD|273633	TIGR01450, recC, exodeoxyribonuclease V, gamma subunit. This model describes the gamma subunit of exodeoxyribonuclease V. Species containing this protein should also have the alpha (TIGR01447) and beta (TIGR00609) subunits. Candidates from Borrelia and from the Chlamydias differ dramatically and score between trusted and noise cutoffs. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_AP022575.1|WP_083050856.1|3072176_3072605_-|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadB	gnl|CDD|184249	PRK13693, PRK13693, (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional.	1.15375e-99
NZ_AP022575.1|WP_083052154.1|3062466_3063372_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.1001e-23

Protein sequences

>NZ_AP022575.1|WP_083050850.1|3070717_3071212_-|preprotein-translocase-subunit-SecE
MSDEGDEDVDAASDGADMQDNRGRGRTAVVTKTVMRPQRPTGKRSRQRAAETEDMDDQESSTAVEVAKKDVATTDVSKSSKGKAALKAKPKKPKKAGAARPANPIGFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVAGADLGLTKLVMWVFG
>NZ_AP022575.1|WP_083050848.1|3069969_3070686_-|transcription-termination/antitermination-protein-NusG
MTAFDGDTSAGEAVDVHKANTPQQVAAPVEEVDPAAALKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMELTDDSWAAVRNTPGVTGFVGATSRPSPLALDDVVKFLLPRGASKKTAKGAASTAAVTEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFSQVSKI
>NZ_AP022575.1|WP_083050845.1|3069480_3069912_-|50S-ribosomal-protein-L11
MAAKKKKVAGLIKLQIVAGQANPAPPVGPALGQHGVNIMEFCKAYNAATENQRGNVIPVEITVYEDRSFTFTLKTPPAAKLLLKAAGVAKGSAEPHKNKIAKVSWDQVREIAETKKADLNANDIDAAAKIIAGTARSMGITVE
>NZ_AP022575.1|WP_083050842.1|3068705_3069416_-|50S-ribosomal-protein-L1
MSKNSKAYRAAAGKVDRTNLYTPLQAARLAKETSSTKQDATVEVAIRLGVDPRKADQMVRGTVNLPHGTGKTARVVVFAVGEKADAAVAAGADVVGSDDLIEKIQGGWLEFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVAKAVADIKGGKINFRVDKQANLHLIIGKASFDAKSLAENYGAALDEVLRLKPSASKGRYLKKITVSTTTGPGIPVDPSITRNFTAEA
>NZ_AP022575.1|WP_083050840.1|3067739_3068636_+|hydroxymycolate-synthase-MmaA4
MADKPTTPTKTRTRSEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKIDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSRNQHARCEQVLGSIDTDRSRRVLLQGWEDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNVMPEDGRMTVQSSVSYHPYEMAARGKKLTFETARFIKFIVTEIFPGGRLPSTEMMVEHGQKAGFVVPEPLSLRPHYIKTLRIWGDTLESNKDKAIEVTSEEVYNRYIKYLRGCEHYFTDEMLDCSLVTYLKPGAAA
>NZ_AP022575.1|WP_163663029.1|3067056_3067668_+|class-I-SAM-dependent-methyltransferase
MNVRRRARAPGSRVPSTTPVSARLSKDAIVIVTWNSDPVSPCSDDRLLPLSHLTLAHRGFERYDDFFRFAYHALPTDGVMLLHAVTALHVKQVIERGIPLTMEMAKFIRFIVTEIFPGGRLPMIETVDEHSTKEGFTLTGVQSLQPHFARTLDLWAEALAAHKDEAVTIQSEEVYQRYMRYLTGCAKAFRMGYIDCNQFTLAK
>NZ_AP022575.1|WP_083052700.1|3066716_3067148_-|transposase
MTIASLDSRADTGVVEGTRDPGARARRRTFTAEYKARILDEYDALPAGSERRGALLRREGLYSSHIAEWRKARDAGARKGLAPRGKKPKRTAEQIELEKLRRRNELLEAELERTKLALEITGKAHALLEMLSESADSDPKSKP
>NZ_AP022575.1|WP_083052152.1|3064294_3065158_+|class-I-SAM-dependent-methyltransferase
MANELTPHFADVQAHYDLSDDFFRLFLDPSQTYSCAYFEREDMTLEEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMRRAIEKYDVNVIGLTLSKNQAAHVQTLFDQLDSPRTTRVLLNGWEQFDEPVDRIVSIGAFEHFGHDRYADFFALAHKILPADGVLLLHTITGLTGPQVAERGLPMTFEMARFIKFIVTEIFPGGRLPSIEMVQEQSAKAGFTLTRRQSLQPHYAKTLDLWAAALQAHQEEAIRIQSEEVYQRYLKYLTGCAKMFRVGYIDVNQFTLAK
>NZ_AP022575.1|WP_083052153.1|3063425_3064286_+|class-I-SAM-dependent-methyltransferase
MAELTPYYEESQAAYDISDEFFGLFLDPTWVYTCAYFERDDMTLEEAQLAKMDLALDKLNLQPGMTLLDVGCGWGGAVVRAVEKYDVNVIGITLSRNHYQRSKERLAAIPTTRRAEARLQGWEEFNEKVDRIVSFEAFDAFKKERYAAFFERSYEILPDDGRMLLHSLFTYDRRWLHEQGIPLTMSDLRFLKFLRESIFPGGELPSEPDIVDNALAAGFSLERTQVLQQHYARTLDMWAANLAAARERAIALQSEKVYDNFMHYLTGCAERFRRGLINVAQFTLTK
>NZ_AP022575.1|WP_083052154.1|3062466_3063372_+|alpha/beta-hydrolase
MEVRSGIAASGEVKLYYEDMGDPDHPPVLLIMGLGAQMLLWRTDFCARLVGQGLRVIRFDNRDVGLSTKTEQHDFRQPVVTRLVRSWLGLPSQAPYTLEDMAGDAAALLDHLDVARAHVVGASMGGMIAQIFAARFAERTKTLAVIFSSNNHRFLPPPAPRALLALIKGPPPDSPRDVILDNAVRVSRIIGSPRYPIPEEQVRADAAECYDRNFHPWGMARQFSAILGSGSLLHYDRRIVAPTVVIHGRADKLMRPFGGRAVARAIDGARLVLIDGMGHDLPMQLWDRVIGELTKNFAEAG
>NZ_AP022575.1|WP_083050853.1|3071660_3072161_-|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadC
MALKTDIRGMIWRYPDYFIVGREQCREFARAIKCDHPAFFSEEAAAALGYDAIVAPLTFVTIFAKYVQLDFFRHVDVGMETMQIVQVDQRFVFYKPVLAGDKLWARMDIHSVDERFGADIVVTKNICTNDDGELVMEAYTTLMGQQGDNSTQLKWDKESGQVIRTA
>NZ_AP022575.1|WP_083050856.1|3072176_3072605_-|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadB
MALREFSSVKVGDQLPEKTYPLTRQDLVNYAGVSGDLNPIHWDDEIAKVVGLDTAIAHGMLTMGIGGGYVTSWVGDPGAVTEYNVRFTAVVPVPNDGKGAEIVFNGRVKSVDPDSKSVTIALTATTGGKKIFGRAIASARLA
>NZ_AP022575.1|WP_083050859.1|3072591_3073071_-|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadA
MPLTTSIVGMHYRYPDHYEVEREKIREYAAAVQNDDRAFFEESAAAELGYHGLLAPLTFICVFGYQAQAAFFKHANIAVTDQQIVQVDQVLKFARPIVAGDKLYCDVYVDSVRETHGTQIIVTKNIVTNEAGDIVQETYTTLAGRAGENGEEGFRDGAA
>NZ_AP022575.1|WP_083050862.1|3073120_3073288_-|50S-ribosomal-protein-L33
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLVLKKFCRNCGKHQAHRETR
>NZ_AP022575.1|WP_083050865.1|3073621_3073837_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MLKRVDILVDDHLLQQVIHKYHLADAREAIHMALKALLEDEVEAEHEPQDEEYDEFSDLSAWRRQRSSDTG
>NZ_AP022575.1|WP_142272148.1|3073878_3074685_+|MBL-fold-metallo-hydrolase
MDETVSGGRRTARNATGSVGAVCGQPYPGSVSDSDRLYFRQLLSGRDFAVGDMLATQMRNFAYLIGDRRTGDCVVVDPAYAAGDLIDTLEADGMHLSGVLVTHHHPDHVGGSMMGFELTGLADLLDRAAAPVHVNTHEALWVSRVTGIPIRDLTIHEHHDKVSVGDVEIELLHTPGHTPGSQCFLVGDRLVAGDTLFLEGCGRTDFPGGDSDEMYRSLQQLAALPGDPTVFPGHWYSADPSAALSRVKRSNYVYRPANLDQWRMLMGR
>NZ_AP022575.1|WP_083050868.1|3074764_3075550_+|hypothetical-protein
MGWVRGSWQGVTDIESSTWLAWAAWTALALGVVALIVTTRQLQRNRQLTFEQTRPHVSILMEPNAADWHLIELVVRNFGRTAAYNVRFSFPKPPTVAEYENASDGYADVVELQLPRELPALAPGQEWRTVWDSALDRAEIGQGIESRFEGTVTYYDRPEPPRGWRFWERGRRPLETKVVLDWDALPPVQRIELMTTHDLAKREKQRLELLRSLLTYFHYASKETRPEVLRSEIDRINRAVAETQDRWRTRQLGQPTDVALG
>NZ_AP022575.1|WP_083050870.1|3075682_3076378_+|crotonase/enoyl-CoA-hydratase-family-protein
MSGPVTYTRDDSIAVIRMDDGKVNALGPTMQQALNEAIDEADRDNVGAIVITGNQRVFSGGFDLKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSSGDHRIAAHAYNIQANEVAIGMTIPYAALEIMKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAEEAAREFAGLNRQAHAATKLRARADALKAIRAGIDGIEAEFGL
>NZ_AP022575.1|WP_083050873.1|3076497_3079794_+|exodeoxyribonuclease-V-subunit-gamma
MALHLHRAERTDRLADGLGALLADPLPDPFAQELVLVAARGVERWLSQRLSHVLGCRRGRGDGVCCGVVFRNPRSLIAEITGAVDDDPWSPEAMAWPLLRVIDASLDEPWCHTLATHLGHLERTDTEAELRRGRRYSVARRLAGLFASYARQRPGLLADWLDGNAADLPTDLAWQPPLWRALVAEVGADPPHVRHQRTVAQLRAGPADLPSRLSLFGHTRLARTEVQLLDALASHHELHLWLPHPSDRLWRALNDLSGLDAAVPRRKDTSARAAQHPLLHTLGRDLRELQRALPATRATDEFLGATPKPDTLLGWLQADLAANAVRPGGRGLADTDRSVQVHACHGPARQIDVLREVLLGLLQDDPTLQPRDIVVMCPDIETYAPLIVAGFGLGEVAGDSHPAHRLRVRLADRALTQTNPLLSVAAELLAIAETRATASQLLNLAQAPPVRAKFGFSDDDLDTIAAWVRESNIRWGFGPEHRRPYGLDNIVHNTWRFGLDRILTGVAMSDDSRGWLSTALPLDDVGSDRVELAGRLAEYVDRLQHVAERLSGVRPLTEWLDALHAGIELLTSSAEAWHRAQLQREFADVLARAGARASTPLRLPDVRALLATQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLDNPDGDDVLAREPMTGERDIRSEDRQLLLDAIVAATDALVITYTGADERTGHPRPPAVPLAELLDALDQTTAVPVREHILIRHPLQPFDPKNVTPGALLPGAPFTFDPTALAAAQAAHGTRCAPTAFITNRLPAPPATDVTLADLLDFFKDPVKGFFRALDYTLPWDVETVEDAMPVQLDPLAEWTVGDRMLHDILRGLHPEDAAHAEWRRGRLPPGRLGVRQAKDIRDRARNLAAAALAHRTVDGQAHDVDVDLGGGRRLSGTVAPVFDGRMVSVTYSKLAPKHVLPVWIGLVALAADQPGHDWSALCIGRGKTRNHIASRLFVPPPDPPAVLRELVSLYDAGRREPLPLPLKTSCAWAQARRDGADPYQPARDTWQTNRFRPGEDEAPAHVRVWGPHAPLEVLLASPRPGEEVAGEDTRLGALAARLWLPLLAAERPAD
>NZ_AP022575.1|WP_083050876.1|3079793_3083072_+|exodeoxyribonuclease-V-subunit-beta
MRRFDLLGPLPSQGSTTVLEASAGTGKTFALAGLATRYLAETATTLEEMLLITFNRAASRELRERVREQILEALRALEGRLRPGSDLVEQLLRGSDDERALRRSRLRDALANFDAATIATTHEFCGSVLKSLGVAGDNAADVELKESLVDLVTEIVDDRYLANFGQQTTDPELTYSQALNLALAVQDDPCAQLRPHDPEPDSPAAVRLRFAAEVLDELERRKGRLRVLGFNDLLTRLAKALEAEDSAARDRLRGRWRIVLVDEFQDTDPVQWRVLERAFRRHSTLILIGDPKQAIYGFRGGDIHTYLKAAGTADARYTLGVNWRSDRVLVESLQTVLRGATLGHAGIVVHAVDAHRDGHRLAGAPHPAPFRLRVVKRHTLGYGGTANVPIGLLRQHIPEDLAADIAELLASGATFDGRPLAAGDIAVIVEHHKDARACRNALASAGIPAVYTGDTDVFASRAAADWLCLLEAFDAPQRTGLVRAAACTMFFGETAETLAAEGDELTDRVAGTLREWADHARQRGVAAVFEAAQVAGMGRRVLGQRGGERDMTDLAHIAQLLHQTAHRERLGLPGLRDWLRRQAAARAGPTEHNRRLDSDAAAVQIMTVFVAKGLQFPIVYLPFAFNRNVRTDDILLYHEDDDTRCLYIGGKTGPGRKAVEQRNRVEAARDNIRLTYVALTRARSQVVAWWAPTFDEVNGGLSRLLRGRAPGESQVPDACTPRVSDEQAWAVFQRWQAAGGPSVEESVIAGPAVLETPSPVTGLQVRHFHRRIDTRWRRTSYSALVRGSEMAGSTAGVTSEPEAGARDDEVETAVVAPPGCGADLVSPLAAMPSGASFGSLVHAVLETADPAAPDLAAELHEQVRRHAPWWGVDVDAAGLAAALVPLHDTPLGPLAAGLTLRQIGVRDRLRELDFEIPLAGGDLCGTELSVADVGELLASQLPANDPLAPYADRLRSAGLGDQPLRGYLAGSIDVLLRLPDRRYLVADYKTNHLGDTAADYGYARLVEAMLHSDYPLQALLYAVVLHRFLRWRQRDYEPTRQLGGVLYLFVRGMCGAGTPVAGGHPSGVFGWNPPPALVVAVSDLLDQGRRAA

Crispr_ID: NZ_AP022575_13

• CRISPR_ID: NZ_AP022575_13
• CRISPR_location: 3421501-3421589
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP022575_13

Consensus_repeat	Method
GCCGCGTCCCCGCGCATGCGGCCAGTTG	CRISPRCasFinder

spacers of NZ_AP022575_13

>13.1|3421529|33|NZ_AP022575|CRISPRCasFinder
GGCAAGGCGGTCGTCGTCTTCCGAACCCCCGAC

CRISPR arrays and Neighbor proteins around NZ_AP022575_13

CRISPR arrays

The CRISPR arrays of NZ_AP022575_13

>merge|NZ_AP022575|13|3421501-3421589|CRISPRCasFinder
GCCGCGTCCCCGCGCATGCGGCCAGTTGGGCAAGGCGGTCGTCGTCTTCCGAACCCCCGACGCCGCGTCCCCGCGCATACGGCCAGTTG

>NZ_AP022575|13|9|3421501-3421589|CRISPRCasFinder
GCCGCGTCCCCGCGCATGCGGCCAGTTG	GGCAAGGCGGTCGTCGTCTTCCGAACCCCCGAC
GCCGCGTCCCCGCGCATACGGCCAGTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083050456.1|3414431_3415601_-|molecular-chaperone-DnaJ	unknown	unknown	gnl|CDD|237655
NZ_AP022575.1|WP_083050450.1|3416351_3418217_-|molecular-chaperone-DnaK	unknown	unknown	gnl|CDD|234715
NZ_AP022575.1|WP_163663086.1|3429791_3431159_-|DUF222-domain-containing-protein	unknown	unknown	gnl|CDD|367155
NZ_AP022575.1|WP_083050441.1|3421748_3423170_+|amino-acid-permease	unknown	unknown	gnl|CDD|224038
NZ_AP022575.1|WP_083050447.1|3419085_3419739_-|transcriptional-regulator	unknown	unknown	unknown
NZ_AP022575.1|WP_083051824.1|3431405_3433544_-|hypothetical-protein	unknown	unknown	gnl|CDD|312941
NZ_AP022575.1|WP_083050476.1|3398336_3399167_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083050436.1|3426209_3427697_-|isoniazid-induced-protein-IniC	unknown	unknown	gnl|CDD|223771
NZ_AP022575.1|WP_083050444.1|3419741_3420545_-|TIGR04255-family-protein	unknown	unknown	gnl|CDD|275082
NZ_AP022575.1|WP_083050460.1|3403471_3414016_+|PPE-family-protein	unknown	unknown	gnl|CDD|366325
NZ_AP022575.1|WP_083050463.1|3401980_3403144_+|2-polyprenylphenol-hydroxylase	unknown	unknown	gnl|CDD|99784
NZ_AP022575.1|WP_083051830.1|3434480_3436961_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|197715
NZ_AP022575.1|WP_083050458.1|3414041_3414431_-|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133387
NZ_AP022575.1|WP_158084782.1|3424131_3424311_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_142272131.1|3423464_3424028_+|hypothetical-protein	unknown	unknown	gnl|CDD|237864
NZ_AP022575.1|WP_083050438.1|3424409_3426197_+|Hsp70-family-protein	unknown	unknown	gnl|CDD|212667
NZ_AP022575.1|WP_083050470.1|3399272_3401819_-|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl|CDD|274529
NZ_AP022575.1|WP_083050453.1|3415656_3416355_-|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl|CDD|237623
NZ_AP022575.1|WP_083050433.1|3427693_3429535_-|isoniazid-induced-protein-IniA	unknown	unknown	gnl|CDD|223771
NZ_AP022575.1|WP_083051827.1|3433748_3434291_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083050456.1|3414431_3415601_-|molecular-chaperone-DnaJ	gnl|CDD|237655	PRK14279, PRK14279, molecular chaperone DnaJ.	0
NZ_AP022575.1|WP_083050450.1|3416351_3418217_-|molecular-chaperone-DnaK	gnl|CDD|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_AP022575.1|WP_083050441.1|3421748_3423170_+|amino-acid-permease	gnl|CDD|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	0
NZ_AP022575.1|WP_083051824.1|3431405_3433544_-|hypothetical-protein	gnl|CDD|312941	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal. The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.	4.32101e-06
NZ_AP022575.1|WP_163663086.1|3429791_3431159_-|DUF222-domain-containing-protein	gnl|CDD|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	3.97445e-98
NZ_AP022575.1|WP_083050436.1|3426209_3427697_-|isoniazid-induced-protein-IniC	gnl|CDD|223771	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only].	2.62488e-29
NZ_AP022575.1|WP_083050444.1|3419741_3420545_-|TIGR04255-family-protein	gnl|CDD|275082	TIGR04255, hypothetical_protein, TIGR04255 family protein. Members of this uncharacterized protein family are found broadly but sporadically among bacteria and archaea, including members of the genera Mycobacterium, Nostoc, Acinetobacter, Planctomyces, Geobacter, Streptomyces, Methanospirillum, etc. The function is unknown.	2.5577e-51
NZ_AP022575.1|WP_083050460.1|3403471_3414016_+|PPE-family-protein	gnl|CDD|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	8.13136e-87
NZ_AP022575.1|WP_083050463.1|3401980_3403144_+|2-polyprenylphenol-hydroxylase	gnl|CDD|99784	cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant. Electron transfer is from NADH via FAD (in the oxygenase reductase) and an [2FE-2S] ferredoxin center (fused to the FAD/NADH domain and/or discrete) to the oxygenase. Dioxygenases add both atoms of oxygen to the substrate, while mono-oxygenases (aka mixed oxygenases) add one atom to the substrate and one atom to water. In dioxygenases, Class I enzymes are 2 component, containing a reductase with Rieske type [2Fe-2S] redox centers and an oxygenase. Class II are 3 component, having discrete flavin and ferredoxin proteins and an oxygenase. Class III have 2 [2Fe-2S] centers, one fused to the flavin domain and the other separate.	1.07878e-95
NZ_AP022575.1|WP_083050458.1|3414041_3414431_-|MerR-family-transcriptional-regulator	gnl|CDD|133387	cd01279, HTH_HspR-like, Helix-Turn-Helix DNA binding domain of HspR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator HspR and related proteins, N-terminal domain. Heat shock protein regulators (HspR) have been shown to regulate expression of specific regulons in response to high temperature or high osmolarity in Streptomyces and Helicobacter, respectively. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.70439e-48
NZ_AP022575.1|WP_083051830.1|3434480_3436961_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	1.42885e-14
NZ_AP022575.1|WP_142272131.1|3423464_3424028_+|hypothetical-protein	gnl|CDD|237864	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional.	0.00117401
NZ_AP022575.1|WP_083050453.1|3415656_3416355_-|nucleotide-exchange-factor-GrpE	gnl|CDD|237623	PRK14142, PRK14142, heat shock protein GrpE; Provisional.	9.2595e-93
NZ_AP022575.1|WP_083050470.1|3399272_3401819_-|ATP-dependent-chaperone-ClpB	gnl|CDD|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_AP022575.1|WP_083050438.1|3424409_3426197_+|Hsp70-family-protein	gnl|CDD|212667	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family. HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs.	7.65694e-32
NZ_AP022575.1|WP_083050433.1|3427693_3429535_-|isoniazid-induced-protein-IniA	gnl|CDD|223771	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only].	3.5807e-46
NZ_AP022575.1|WP_083051827.1|3433748_3434291_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.00811483

Protein sequences

>NZ_AP022575.1|WP_083050444.1|3419741_3420545_-|TIGR04255-family-protein
MTAHPKYPNDPLALVLIELRHPPTEPPAPSAISILKEALARWTPILEREEVRQVNLETGEHTAHSQKKLVARDRRTAITFRPDAMTLEVTDYPGWEEFRSIVHAMVAARQDAAPVDGCIRIGLRYINEIRAPLAEPSGWAYWVTESLLGPGTQLADLKLTTTAQQHVIQCDGPEPGDSLTLRYAAARGAVIQSTPFLQRLKEPPAEGDFFLIDIDSAWSDPHKGIPALDAPLVDEVAERLHTPIGPLFESLITSELRTKVLQQPGQD
>NZ_AP022575.1|WP_083050447.1|3419085_3419739_-|transcriptional-regulator
MTISFSCSNLRDDATSGNGDYRLDKLPETTPSTSVFDRADVNYRQFTELHGQVRDTRRKAHMAELESKTVERARCAPMHALEQLADYGFAWRDIARVVGVSVPAITKWRKGAGVTGGNRLKIARLLALIDMLSDRFIDEPASWLEMPIQDGVGITRMDLLERGRYDLVLALASTHTGDGTVEYVLNEIDPDWRETVVDNVFESYAAEDGVISIRPKQ
>NZ_AP022575.1|WP_083050450.1|3416351_3418217_-|molecular-chaperone-DnaK
MARAVGIDLGTTNSVVCVLEGGDPVVVANSEGSRTTPSIVAFARNGEVLTGQPAKNQAVTNVDRTVRSVKRHMGSDWSIEVDGKKYTAPEISARILMKLKRDAEAYLGEDITDAVITTPAYFNDAQRQATKDAGQIAGMNVLRIVNEPTAAALAYGLDKGEKEQTILVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDDRIVNWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRITQDLLDRTRKPFQSVIADTGISVSDIDHVVLVGGSTRMPAVTDLVKELTGGKEPNKGVNPDEVVAVGAALQAGVLKGEVKDVLLLDVTPLSLGIETKGGVMTRLIERNTTIPTKRSETFTTADDNQPSVQIQVYQGEREIAAHNKLLGSFELTGIPPAPRGIPQIEVTFDIDANGIVHVTAKDKGTGKENTIRIQEGSGLSKEEIDRMIKDAEAHAEEDRKRREEADVRNQAETLVYQTEKFVKEQREAEGGSKVPEDTLNKVDAAVANAKTALGGTDITAIKAAMEKLGKESQALGQAIYEATQAAADAAGAAHPGGGPAGSADDVVDAEVVDDDREAK
>NZ_AP022575.1|WP_083050453.1|3415656_3416355_-|nucleotide-exchange-factor-GrpE
MTEGNPQEQVTVTDKRRIDPETGEVRHVPAGAAPTGTAAPAGPAKSAPSADSALADKVAELTADLQRVQADFANYRKRALRDQQAAAERAKASVVSELLHVLDDLDRARKHGDLDSGPLKLVADKLMKALTGLGLKPFGAEGEDFDPLLHEAVHHEGEGGQDSKPVIGTVMRRGYQLGEQVLRNALVAVVDTVEDDGTADIEAAEVIAPSDTPDTPDTPGDTANSEEQNTES
>NZ_AP022575.1|WP_083050456.1|3414431_3415601_-|molecular-chaperone-DnaJ
MAQREWVEKDFYKELGVPSDATDEQIKKAYRKLASEFHPDKNPAGAERFKAVSEAYSVLSDETKKKEYDETRRLFAGGFGGGRRFDPGGFRGFGAAGDGVEFNLNDLFDAASRSGGTNIGDLFGGLFGRGASPRPSRPRRGNDLETETELDFVEAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPACNGSGVINRNQGAFGFSEPCTECRGSGSIIEHPCEQCKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGVRVPKGTADGRILRVRGRGVPKRGGGSGDLLVTVKVAVPPNLEGAAREALEAYAAAERASGFNPRAGWAGNR
>NZ_AP022575.1|WP_083050458.1|3414041_3414431_-|MerR-family-transcriptional-regulator
MAKNPKKKEEARTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQRLSQDEGVNLAGIKRIIELTNQVEALQARLQEMAEELAVLRANQRREVAVVPKSTAVVVWQPRKPR
>NZ_AP022575.1|WP_083050460.1|3403471_3414016_+|PPE-family-protein
MSFAVLPPEINSARLYLGAGLGPMLDAAGAWQGLASELGSAATAFSSVTAGLTGSAWQGAAAAAMAGAAAPYLGWLTAAAAQAERTATQARLAAAAFEAALAATVPPEIISANRAQFVQLVFTNWLGQNAPAIAAAESLYEQMWAQDVAAMFAYRAGAAAAVSGLTPFTQPLQGLAAAIPASAAAAATTFRNLGVANIGQGNVGNANVGDFNVGSGNRGSGNIGSGNIGSSNVGFGNVGPALTAALGNIGFGNTGSNNIGFGNTGNNNIGFGNTGDNNIGIGLTGNNQQGFGGWNSGAGNVGLFNSGTDNVGIGNSGTGNFGIGNSGNSYNTGIGNSGDANTGFFNSGIANTGIGNSGSYNTGSYNPGDSNTGGFNQGKYNTGYLNSGNYNTGLANTGNVNTGAFIGGNFSNGFLWRGDFQGLIFGSPGFGNSTTIPSSGFFNSGAGSASGFVNSGANNSGFFNSSLGAVGNSGLGNTGVLQSGLINSGNTISGALNTSLVAITTPAFISGLFNTGSNMSGFFGGPATFNLGLANRGAVNILANANIGSYNILGSGNVGSYNILGSGNIGSGNILGSGNVGSNNFGSGNVGSNNFGSGNIGIFNVGSGNLGSYNIGPGNLGDYNIGFGNAGNYNQGFANTGNNNIGFANTGSNSFGIGLTGDGQVGIGALNSGIGNSGLFNSGSNNIGLFNAGTGNVGIGNSGTGNMGLLNAGVGNWGFENPGTGNTGLLNAGAYNTGWANVGTVNTGWANPGSHNTGGFNVGDTNTGNFNIGDTNSGSYNPGNINTGFFNTGNVNTGLLNSGNFNNGFSQSLDNQGQIGIDLSFTTPYIPINYQMIMPVHEVRIFDSMPIPITMAGVVFPQTFYLGGLFFFGPVVLGGSTLFTPTVTLTIGGPTVTLPITVVGALESREIVFLRIPAAPGFGNTTTNPSSGFFNSGTGGTSGFQNFGSGSSGIWNSGVPGAFGTSGFQNFGSLQSGWANLGNTISGFYNTSTANLATPANVSGLYNIGTDLAGVFQSNSGTIFNLGLADLGRLNVGSGNIGDFNVGSGNVGSFNIFSGNQGVYNLGPGNLGNYNVGFGNLGSYNIGLGNLGDYNQGFGNTGSNNIGFGNTGDNNIGIGLTGTNQQGFGGWNSGTGNIGLFNSGTNNIGIGNSGTGNWGIGNTGNLNTGIGNTGSLNTGLFNTGNVNTGVANAGNYNTGNYNTGDFNTGVANRGDYNTGGYNTGDYSTGLANQGDIATGAFITGDMGNGFMWRGDQQGLWGAGYRLHVPEIPAHVTVEVPLNIPITASFTNTVYSGITLHDVHFGFTIEIGPIPLAEGVINSVTLPPITATGPAISFNIGATDGTTKISIPATASIGPVDWTPVNIPAATGFFNATTGASSGFFNGGPGTVSGIGNIGANISGFQNVATNGASGVNNYGSLQSGLANLGNTVSGVYNTGIGTPANVSGISNVGSNLAGAFFSQVPPPGMSTFNVGLGNVGHNNVGFGNVGNNNVGFGNVGDNNVGFANLGSFNIGSGNTGNYNVGPGNLGDYNIGLGNLGTYNIGFGNFGNYNQGLGNAGDFNQGLANTGDNNVGTGLTGDNLQGFGDWNSGTGNSGLLNSGTNNVGLFNSGTGNIGIGNSGTGNFGIGNTGNTNTGLFNTGAINTGLFNPGNVNTGIGNTGHYNTGSFNAGGFNTGGFNPAAYNTGWLNTGDYNTGFANSGNVNTGAFNGGNYNNGFLWRGDNQGQWGTSYTMSIPDTAIPVNVRVPIFLDIPISGTLGTITVLSFNVPSVTVEATLVGIGVKLVKVNGFTIPNISINLPAIGLNIGAGPGPLIDIVGSGGLLPIKIPIVDIPAAPGFGNQTGMPSSGFLNSGPGTVSGFGNVGSNSSGFFNLASGASGISGYKNLGDLVSGVSNLGNTVSGFLNTSTLGLATPANVSGAGNIGGNIAGLVNNNPNFNLGFANIGTANLGSGNLGDFNVGFGNIGNSNVGGGNVGSFNVFSGNQGIYNVGPANLGSYNLGLGNLGSYNIGLANLGDYNQGFANVGSNNIGFGNTGNNNIGIGLTGNGQQGFGGWNSGSGNTGLFNSGTNNIGLFNSGTGNVGIGNSGTGNTGIGNPGIGNTGIGNVGTGNWGLWNTGTANTGLANPGDYNTGAYNTGSTNTGLANPGDYNTGAYNTGNSNTGSFNQGAFNTGHFNTGDFNTGLGNSGDVNTGAFNAGNFNNGILWRGDYQGLWGTHAEIGIPQFPILNFDINIPINIPIHLDLGVLALNGFSFPRITINALGITNFGIGPITIPRITGTLPVIDVTIGSPTTSIPIHIRSGLGPIRVVLLDIPPAPGFGNSTTGPSSGFFNTGTGTASGFANVGSNSGLWNSTVAAVGNSGMQNFGSLQSGWANLGNTVSGIYNTSTANLSTPANGSGLYNLGTNLAGLFRGPDGTVILNAGLADLGRWNVGSANIGDVNLGSGNLGSGNVGVGNVGSSNVGAGNIGSGNIGFGNAGPGLTAALGNIGIGNTGHFNVGFGNTGDGNIGFGNTGNGNIGIGLTGDGQVGLGPLNFGVANMGLFNLGDNNIGLANAGNFNQGFANTGNNNIGLFNTGNGNVGVGLTGDGQSGFSSLNSGAGNTGFFNSGTGNTGLFNSGTGNIGLFNSGTGNVGIGNMGSGGFGIGLSGNNQIGLGGTNSGSFNVGLFNSGTGNVGIGNSGTGNWGIGNSGTGNTGIGNTGTWNSGLFNAGTFNTGLGNPGDFNTGFFNIGNFNTGIANLGDFNTGSHNTGDYNTGMANSGDFGTGGYITGDMNNGFFWRADRQGLLAANYTITVERVPAFLTVDVPVYVPITVSITPVSIPAVTIPVFDARGSLDLVLYKGTVISTWGPINLHGGNQIAPSDTPITINFGATPPAPAVMTFHIGNPPPYGPFNPQTVISIVGTAGAGPAYLPLIDLAPQPGFFNATTGPSSGFLNWGPGSASGLQNFGNNSGFYNVATGIVGNSGFQNYGSMQSGLANLGNTISGWLNTGTAVPATVSGFSNIGTNLAGWFQNGPDATTFNVGLANAGYWNLGSADLGIYNLGSGNVGSYNLGNGNIGSFNIGSGNVGSSNFGSGNVGSGNWGFGNVGPAMTAALGNIGFGNTGSFNIGFGNTGTNNIGFGNTGDGNIGIGLTGNAQTGFGGWNSGTGNVGLFNSGTNNVGIGNSGTGNWGIGNSGEYNTGIGNTGSTNSGLFNTGMVNTGIGNAGNVNTGLYNTGNTNTGSFNPGDYNTGGFNTGDYNTGYFNSGNSNTGIGNSGDVDTGFFISGSYSNGFLWRGDYQGLGGFAYQTTIPEIPWDYSVVGDIEIPVTGTINAVTQDMFTLARFPIDIDIQITICIIYIPFVGCVLHGTTPPIHVKTEHIGPYEIDPSVLNPETPLQMVISQPINFPGAGTVGPFTFGFGWQQSPGFFNTSTTPSSGFFNSGAGGASGFLNAANGAVSGVGNVFTETSGLFNAGGVGNSGFQNFGTLESGWANLGNFMSGFYNTSILNLMTAAFVSGVGNVGSQLSGILQHNAP
>NZ_AP022575.1|WP_083050463.1|3401980_3403144_+|2-polyprenylphenol-hydroxylase
MGLDDRDALRVLHDAFTPDDANGLVRRFYANWFALDVSVRDLFPPEMAGQRAAFAHALHWVYGELVAQRAEAPVAFLAQLGRDHRKYGVLPTQYETLRRALYATLRGYLGAAWTPAVDEAANQSLNLITGVMSGAADSDDGPAWWDGTVTEHVRVSRDLAVVRLRLDRPLPYHAGQYVNVHVPQCPHRWRYLSPAVPADPDGRIEFHVRVVPGGLVSNAVVNETRPGDRWRLSSPHGGLHVDRDGGDVLMIAGSTGLTPLRALIMDLARYAVNPRVHLFFGARYRCELYDLRTLWQIAAHNPWLSVSPVSEYDRDPAWAADYPDVTPPRGLHVPQTGRLPEAVTKFGGWGDRQILICGGPAMVCATKAALIAKGAPPERIQHDPLSR
>NZ_AP022575.1|WP_083050470.1|3399272_3401819_-|ATP-dependent-chaperone-ClpB
MDSFNPTTKTQAALTSALQAASAAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAETQRLLDRLPQATGASAQPQLSRESLAAITTAQHLATELDDEYVSTEHVMVGLATGDSDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALEKYSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIIALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEASKERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRELKGQLEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVVGQRKPVQAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSGGSAEQVMAAVRATFKPEFINRLDDVLIFEGLNPEELVQIVDIQLAQLGKRLAQRRLQLEVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDRLAKMLLAGQVHDGDTVPVNVSPDGDALILG
>NZ_AP022575.1|WP_083050476.1|3398336_3399167_-|hypothetical-protein
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRRSWARSHGFDYERESTEIVKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLDEVATVIALHRKVGTNVVLDLRLKGLKEPRESDIWLLGAIGPRMLYATNLDAARRACDRRMVTFAHTAPDCAEIMWNEPNWTLVSLPISSTRAQWDEGLRTVRQFNDLLRVLPPPPQENPQETAPRTAAPGRPLAPAGRTELPPRRQVDPAAAVIADSARRAEPVRGDDGVRRPPSTGRNGQQATNYRP
>NZ_AP022575.1|WP_083050441.1|3421748_3423170_+|amino-acid-permease
MPPVNTAAERLSREDAGYHKDLHNRQLQMIALGGAIGTGLFLGAGGRLAAAGPGLFLVYGICGIFVFLILRALGELVLHRPSSGSFVSYAREFFGEKVAFAAGWMYFLNWAMTGIVDTTAIAHYCHYWKTFQFIPQWTLALIALVIVVSMNLISVKLFGELEFWAALIKVLALAIFLIVGTVFLAGRFKVEGQETGVSLWASHGGLLPAGLLPLVLVTAGVVFAYAAVELVGIAAGETADPERIMPRAINSVVFRIAVFYIGSTALLALLLPYTAYREHVSPFVTFFSKVGFEGAGSLMNLVVLTAALSSLNAGLYSTGRILRSMAINGSGPKFTAPLSKNGVPYGGILLTGAIGLFGIVLNAIKPSQAFEIVLHIAATGVIVAWATIVACQLQLLRMAKAGKVQRPRFRMPLSPYSGYLTLAFLAGVLILMLFDEVYGRWMLAAMLIGIPCLIGGWYVVRARVTAVEAEPRD
>NZ_AP022575.1|WP_142272131.1|3423464_3424028_+|hypothetical-protein
MRWWHKARWGLAALLAGAALVVGCSTTIDGRPVAAPGSGPTEPSVPTPRPSISPPLTTSPAAPTPPASPTAPAGAIPLPPDENGYVFIETKSGKTRCQINKESVGCEAQFTNSPIRDGEHANGVHITAGGSVQWVLGNLGAIPTVTIDYQTYDAQGWIITATIDGTRFQNASTGHGMFVSIDRVDTF
>NZ_AP022575.1|WP_158084782.1|3424131_3424311_+|hypothetical-protein
MGRRPARPRPPHSDVGDDDGHDGYHPHAGDHPAGAHHYLADDHHHPDHYQFPSARGVPT
>NZ_AP022575.1|WP_083050438.1|3424409_3426197_+|Hsp70-family-protein
MSESLGLSIGVANLVAAPAGAHPVRRASVLTLFDRRAAEVGLPEENPNLTEPGLVLRGFVERVADQAPLVAADGTKYFGEALTAVALAAMARTVGYGAPVTIAAPAYWSEGQFLALRQALLSQPTLMPDDVPPTLISDAVAALAALDSIPGFPTDGVVAVCDFGAAGTSVTLADAGTNYQRIGHTVRYRDFSGDEIDQLVLNHLVGVAPGADTPDVAGTATGMGSVTRLLGACRRAKEQLSAATMATIPDAVGAPSPGAQLGLSRTEFDQLISGPLDRFVDSFEELLRRNGIAPANLGAIATVGGGASIPLITTRLSDRLRVPVFTTAQPLYSAAVGAAALGARSSAGAPTGAGPAVAAPTDMVGVAPATEMSPTAWANRAAATGESAVDDAGLQAQSATYRALAWSEDTGTGGEPIPYTDAAGEYGGDATTLDYVPGFDYSDDDRYAADPEHLPWYRRGSLVFSLAAAAAAVLLAVILGLTLGPTKSKPVTTTSSQPAPPPPQTITVTGPNNSPTVTVIPPPPLSSTTQPPTTTQPATTTTAPPTTTTPPTTTTAPPTTTSPPTTAAPPTTTQRPTTTAAPVTPTTTAAPAPGT
>NZ_AP022575.1|WP_083050436.1|3426209_3427697_-|isoniazid-induced-protein-IniC
MSTSDRVRAILRGTIEAYRGEPAYRQRADVFYELERIGARLGEPIRIALAGTLKAGKSTLLNALVGDDIAPTDATEATRIVTWYRHGPTPRVTANHPGGRRTNVPITHRGGLSFDLRRVNPDDVVDLDVEWPAEELASSTIIDTPGTSSLTRDTSERTLRLLVPADGVPRVDAVVFLLRTLNAADIALLKQIGGLVGGSAGALGIIGVASRADEIGAGRIDAMLSAKDVAKRFTSELNQTGICQAVVPVSGLLALTARTLRQGEFIALKKLASADRTELNKALLSVDRFVRPDSPLPVDAGVRAQLLERFGMFGIRISIAALAAGVTDSTGLASELLERSGLVALRNVINQQFTQRSAMLKAHTALVSLRRFVEAHPVMATPYVIADIDPLLADTHAFEELRLLRQLHSRATTLNEDEMVSLRRIIGGSGTEPAARLGLSPYDANPREAQRAAFAAAQRWRRRAAHPLNDPFTTRACRAAVRSAEAMVAEFAAGR
>NZ_AP022575.1|WP_083050433.1|3427693_3429535_-|isoniazid-induced-protein-IniA
MTQPDDPRRVGVIVELIDHTVAIAKLHDRTDLVQRLRRARERITDPQIRVVIAGQLKQGKSQLLNALLNLPVARVGDDEATVVITVVSYSDQPSARIVVAVGPNGETAAVDIPVDDINTDLRRAPQANGRNVLRVEIGAPSPLLRGGLVFIDTPGVGGHGQPHLSATLGLLPDADALLMVSDASQEFTEPEMWFIRQASQICPVGMVVATKTDLYPHWREIVNTNAAHLQRARVPMPIIGVSSLLRSHAVTLNDKELNDESNFPAIVTFLSERVLSRETDRVRDQVLHEIHSAAAQLATSVGSELSAVNDPDLRDRLAADLERRKREAQDALQQTALWQQVLGDGFTDLSADVEHDLRARLRAVIDDAERQIDSCDPTQHWAEIGNDVENAIATAVGDNFVWAYQRAEALAEDVARSFADAGLDSVMSPELSARVMGSDFGRLKALAPMESKPLRKGQKMIIGMRGSYGGVVMIGMLSSVVGLGLFNPLSVGAGLILGRMAYKEEKHNRLLRVRNEAKTNVRRFVDEVSFVVGKESRDRLKTIQRTLRDHYREIADEITRSLNESLQATITAANLEEAQRDNRVRELQRQRDILNQVADHLDKLTPPVTLGRA
>NZ_AP022575.1|WP_163663086.1|3429791_3431159_-|DUF222-domain-containing-protein
MHSSSREEIVAVFDALDAALDRALDLSIDVLTTPECLTMLERCETLRRRLPAIEHPFINKLADQADPSELGGKLPFALAERLRITRGEAARRIGEAAELGPRRALTGEVLPPLLTATAEAQRAGQLGTQHVQIIRSFLHQLPSRVDLPTRDKAEAELAGLGGQFRPDQLHKLAAKLADCLNPDGNFTDTDRARRRGIILGKQGADGMSAITGYLTPEARATVDAVLAKLAAPGMANPADPTPCVAGTPSQAAIDADTRSTAQRNHDGLQAALRALLCSGELGQHNGLPAAIIVSTSLAELQSAAGHALTGGGSLLPMSEVIRLAAHAHHYLRIFDHGRELALYHTKRLASPAQRIVLYAKDRGCSFPNCDVPGYLTEVHHVTDYSECRETDIDKLTQACGPHHKLATSGGWITRKRKDGTTEWLPPAHLDHGQPRTNSYFHPEKLLHKDDDDDDP
>NZ_AP022575.1|WP_083051824.1|3431405_3433544_-|hypothetical-protein
MNMTSLVDYILSLFRSEHAARSFVAAPGQAMTNAGLINVSPAEFSWVAANMVPGLALDPGDPIGGVRQAVAERHGLASASDPGVGSTVVAQDAGVVAGDAGVVVGGAGLVAAEAGAGMATVAAADIGGGLTGGFGAGVLGQGGLGWQTGVVGFFPGLGFAEATGGFASQVGLGAQAGLGFGVGVQAGVGAQVGAGFGLGVGAQTGLGAQAALGVSGGFEAGLAAHVGGQAAIGGQVGAGFAGGGGLGLSGAIGGSAAGGIAAGVAGQAGGAIGGSAGGAIGAGAGVAGRFGGNSQIGVGGQPGGVVVGQVGAGGQAAVGAGGQAGIGVGGQAAVGGQAGVGAAGAVGGQAGIGIGGQAGGAIGGAAGLGGQVGVAAGGAVAGQAGLAGQAGLAGQAGLAGQAGIAGQAGLVSQAGLGLVGQTALGGQAGIAAGGGLAGAGSVGGLTNIGGNAALGAGASSQAGLIASEGAALSGAAMPHVSGPLAGVGVGGQAGAADGAGLGIGGASAGHPPTQPAVISAGAGMGAQAAAGGGAAAGAGGGTELGGQAGIGGGTGLAGQAAAAGGTAAGGAGALGDILGDEGATLGGGGGVSGGVTPVEHGPTLPGGHGPVIQGGTGVGGHVTPPSGGAVVQSPAGHGGMNPPVINAPAPHTPTPTPAAPAPVVPPTEHAPVEPPVHHEPPTVSGHEPPVTHEPPVHIEPPASHGPFGLPGF
>NZ_AP022575.1|WP_083051827.1|3433748_3434291_-|hypothetical-protein
MANSLLDFVISLVRDPEAAARYAANPAQAIANAHLTNVTSADVNNLIPVVSDSLSMAAPAGAAAGAPVADHGNVWATGAAAAALDAFSSHTPTPAAQHHGPASGVINPPGSPGSVEVPTNPQPLGTGPHEPSVLLTGAEMADPAFAHGDEFPTEDPAIWDHSVIQPHAAEPNHHGFDIHG
>NZ_AP022575.1|WP_083051830.1|3434480_3436961_+|helix-turn-helix-transcriptional-regulator
MRYEHVARLAEDGDPVTASASELPPAARGVIRDLMNAATLPVKVLISGGLGTGKSTVLAAARETLRRAGLNVLARPPRDGDPLDAAFVVDDAHLLSDAELLQLTERVADARATVVVAAEAHEQHPALRALATAVERDRPRISLGPLPVAEHLRDCTAGLPFLVHAVSDGSRPSAQAAKTALIERLRRLDEPALDTLLVMSLTPELGTTDVAAALGISATDARRLVDRAHASGLTGPAHPPAFLRSVHEAVAHIVGNAHHNEVETSLLRSQLDIATVSPELALRLAEHGLRDDRLAGILARYAADARADSVRAARLYRAAVGAGAEGLTSRLADALALTGDCAAAATLADDLLTSSDSADRAAAVRIAASVATHDGNTGQAAELFGWLGPHSDPVVGAAAAIVFAATGDQASARAALRLNDAGPPTMAARAARGLAEGLLLSIDQPYPAAMARLGQALAVGQSIGEVLPDSPAALVTLAAIHGGDPVRARGVIGRAVHAGGDALFRGRHLLLSGWIKMQDGQLPSATADVTAAGAELHRRDALWAAALRTAVARRSGDIGALQKHWCAARDVLAEHSVDLFTLLPVGELWVAAARLRQLDQLQHTVDQAFTLLDSLGNPTLWSIPLHWAGVHAGILANSPESVAPHGQALSAAAGHSTLARALAGAGRTWLRVLADRVDADEVTAAARALSRAGLTSDATRLAGQAALQTPDARVSGAMLQLARDLKLSVSPSGTPSEPADAQPPTTGPSAARQPRPGTPLSDREREVAELLLLGMPYRDIGGQLFISAKTVEHHVARIRRRLGAGSRSEMLSMLRAMLAPPGESRS

Crispr_ID: NZ_AP022575_14

• CRISPR_ID: NZ_AP022575_14
• CRISPR_location: 3444169-3444255
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP022575_14

Consensus_repeat	Method
ACCGCGGCGATCACCAGCAGCACC	CRISPRCasFinder

spacers of NZ_AP022575_14

>14.1|3444193|39|NZ_AP022575|CRISPRCasFinder
AGGTATACCGCGCACACCCAGTGCGGGGAACGGTTGCCC

CRISPR arrays and Neighbor proteins around NZ_AP022575_14

CRISPR arrays

The CRISPR arrays of NZ_AP022575_14

>merge|NZ_AP022575|14|3444169-3444255|CRISPRCasFinder
ACCGCGGCGATCACCAGCAGCACCAGGTATACCGCGCACACCCAGTGCGGGGAACGGTTGCCCACCGCGGCGATCACCAGCAGCCCG

>NZ_AP022575|14|10|3444169-3444255|CRISPRCasFinder
ACCGCGGCGATCACCAGCAGCACC	AGGTATACCGCGCACACCCAGTGCGGGGAACGGTTGCCC
ACCGCGGCGATCACCAGCAGCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_163663086.1|3429791_3431159_-|DUF222-domain-containing-protein	unknown	unknown	gnl|CDD|367155
NZ_AP022575.1|WP_083051844.1|3442541_3443297_-|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	unknown	unknown	gnl|CDD|274422
NZ_AP022575.1|WP_083051858.1|3446304_3447891_-|nitrate-reductase-subunit-beta	unknown	unknown	gnl|CDD|224063
NZ_AP022575.1|WP_083045682.1|3453699_3454866_-|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223523
NZ_AP022575.1|WP_083051824.1|3431405_3433544_-|hypothetical-protein	unknown	unknown	gnl|CDD|312941
NZ_AP022575.1|WP_083051841.1|3442140_3442515_-|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl|CDD|378915
NZ_AP022575.1|WP_083045683.1|3455835_3456462_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NZ_AP022575.1|WP_163663092.1|3456518_3456884_-|hypothetical-protein	unknown	unknown	gnl|CDD|185594
NZ_AP022575.1|WP_083051849.1|3444893_3445637_-|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl|CDD|376889
NZ_AP022575.1|WP_083045819.1|3455070_3455811_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_AP022575.1|WP_142272197.1|3451766_3452099_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083051830.1|3434480_3436961_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|197715
NZ_AP022575.1|WP_083051852.1|3445633_3446308_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl|CDD|225091
NZ_AP022575.1|WP_083051839.1|3441259_3442123_-|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl|CDD|130274
NZ_AP022575.1|WP_083051836.1|3439802_3441095_+|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl|CDD|181738
NZ_AP022575.1|WP_163663089.1|3452111_3453479_+|DUF222-domain-containing-protein	unknown	unknown	gnl|CDD|367155
NZ_AP022575.1|WP_083051833.1|3437072_3439772_+|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|223325
NZ_AP022575.1|WP_083051855.1|3447902_3451568_-|nitrate-reductase-subunit-alpha	unknown	unknown	gnl|CDD|227346
NZ_AP022575.1|WP_083050433.1|3427693_3429535_-|isoniazid-induced-protein-IniA	unknown	unknown	gnl|CDD|223771
NZ_AP022575.1|WP_083051827.1|3433748_3434291_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_163663086.1|3429791_3431159_-|DUF222-domain-containing-protein	gnl|CDD|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	3.97445e-98
NZ_AP022575.1|WP_083051844.1|3442541_3443297_-|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	gnl|CDD|274422	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083. This protein family pulls together several groups of proteins, each very different from the others. They share in common three conserved regions. The first is a region of about 38 amino acids, nearly always at the N-terminus of a protein. This region has a bulky hydrophobic residue, usually Trp, at position 29, and a His residue at position 37 that is invariant, so far, in over 150 instances. The second conserved region has a motif [DE]xxxHxxD. The third conserved region contains a hydrophobic patch and a well-conserved Arg residue. Most examples are found in the Actinobacteria, including the genera Mycobacterium, Corynebacterium, Streptomyces, Nocardia, Frankia, etc. The pattern of near-invariant residues against a backdrop of extreme sequence divergence suggests enzymatic activity and conservation of active site residues.	1.34406e-21
NZ_AP022575.1|WP_083051858.1|3446304_3447891_-|nitrate-reductase-subunit-beta	gnl|CDD|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
NZ_AP022575.1|WP_083045682.1|3453699_3454866_-|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|223523	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].	2.96786e-32
NZ_AP022575.1|WP_083051824.1|3431405_3433544_-|hypothetical-protein	gnl|CDD|312941	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal. The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.	4.32101e-06
NZ_AP022575.1|WP_083051841.1|3442140_3442515_-|nuclear-transport-factor-2-family-protein	gnl|CDD|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	0.00814402
NZ_AP022575.1|WP_083045683.1|3455835_3456462_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	5.6872e-21
NZ_AP022575.1|WP_163663092.1|3456518_3456884_-|hypothetical-protein	gnl|CDD|185594	PTZ00395, PTZ00395, Sec24-related protein; Provisional.	5.95917e-06
NZ_AP022575.1|WP_083051849.1|3444893_3445637_-|respiratory-nitrate-reductase-subunit-gamma	gnl|CDD|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	2.70403e-110
NZ_AP022575.1|WP_083045819.1|3455070_3455811_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	9.81461e-10
NZ_AP022575.1|WP_083051830.1|3434480_3436961_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	1.42885e-14
NZ_AP022575.1|WP_083051852.1|3445633_3446308_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl|CDD|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	1.2541e-46
NZ_AP022575.1|WP_083051839.1|3441259_3442123_-|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl|CDD|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NZ_AP022575.1|WP_083051836.1|3439802_3441095_+|pyridoxal-phosphate-dependent-aminotransferase	gnl|CDD|181738	PRK09265, PRK09265, aminotransferase AlaT; Validated.	0
NZ_AP022575.1|WP_163663089.1|3452111_3453479_+|DUF222-domain-containing-protein	gnl|CDD|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	2.2961e-97
NZ_AP022575.1|WP_083051833.1|3437072_3439772_+|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	2.12629e-84
NZ_AP022575.1|WP_083051855.1|3447902_3451568_-|nitrate-reductase-subunit-alpha	gnl|CDD|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
NZ_AP022575.1|WP_083050433.1|3427693_3429535_-|isoniazid-induced-protein-IniA	gnl|CDD|223771	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only].	3.5807e-46
NZ_AP022575.1|WP_083051827.1|3433748_3434291_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.00811483

Protein sequences

>NZ_AP022575.1|WP_083051844.1|3442541_3443297_-|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme
MDHASAYLEQTRAFGELIRTADQSTPVPTCPGWSLGQLFRHVGRGDRWAAQIVRDRLDHFLDPRGVEGGKPPPDPDDAISWLRDGAQRLVDAVARTGADTPVWTFLGRRPAGWWIRRRLHEAAVHRADAAITVGSEFTLQPDVAADGISEFLERIVIQAGRDGAALPLEGDDTLHLHATDPGLGESGEWTIGVDDGGITWSHRHGKGTVALRGGATELLLAMVRRVPVADTGIELLGDVAVWNTWLDRTPL
>NZ_AP022575.1|WP_083051841.1|3442140_3442515_-|nuclear-transport-factor-2-family-protein
MTTSEIATVLAWHDALHTADIETLVALSSEDIDIGDARGAVQGHEALRRWAAALTTTAELGRMFVHDGVVVAEQKITDRDDPGAVTTSASAFRVVRDHVTAVFRHQDLASALAATELTEADAVD
>NZ_AP022575.1|WP_083051839.1|3441259_3442123_-|glucose-1-phosphate-thymidylyltransferase-RfbA
MRGIILAGGSGTRLYPITMGISKQLLPVYDKPMIYYPLTTLMMAGIRDIQLITTPHDAPGFHRLLGDGAHLGVNISYATQERPDGLAQAFVIGANHIGNDTVALVLGDNIFYGPGLGTSLRRFQSVSGGAIFAYWVANPSAYGVVEFGADGMALSLEEKPATPKSHYAVPGLYFYDNDVIEIAKGLKKSARGEYEITEVNQVYLNQGRLAVEVLARGTAWLDTGTFDSLLDAADFVRTLERRQGLKVSIPEEVAWRLGWIDDEQLARRARSLVKSGYGSYLLELLER
>NZ_AP022575.1|WP_083051836.1|3439802_3441095_+|pyridoxal-phosphate-dependent-aminotransferase
MDSDGTIVDVTTPHQLHWHTASHQRQRAFVQSSKLQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIMRDMIQALPYAQGYSDSQGIMSARRAVVTRYELVRGFPRFDVDDVYLGNGVSELITMTLQALLDNGDQVLIPAPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKITARTKALVVINPNNPTGAVYTREILSQMVDVARKHQLLLLADEIYDKILYDDAQHISLASVAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKDHASSFIEGINLLANMRLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQRDVAWTKLNEIPGVSCVKPAGALYAFPRLDPEVYDIADDEQLVLDLLLSEKILVTQGTGFNWPAPDHLRLVTLPWARDLAAAIDRLGNFLASYRQ
>NZ_AP022575.1|WP_083051833.1|3437072_3439772_+|4Fe-4S-dicluster-domain-containing-protein
MTTQTLIRLVLGLGMTAVVGVFALRRIWWLYRLIMSGQPASGRTDQLGTRIWTQVAEVFGQRRLLKWSLPGLAHFFTMWGFFILLTVYIEAYGVLFQPNFHLPIIGRWDALGALQDFFALAVLTGIITFAIIRLRSEPKEYGRGSRFYGSHLGGAWLILFMIFNVIWTYAIFRGASVNALGDEFPYGKGAFFSHAMGALLHPLGHNTNEIVETVALMLHIGVMLAFLLIVLHSKHLHIFLAPINVTFKRLPDGLGPLLPMESGGKPIDFENPSEDAVFGRGKIEDFTWKANLDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGEKTGAEGDTESGHKEIHHVPESGFGRVPGHGPEQVARPLVGTAEQGGVIDPDVLWSCVTCGACVEQCPVDIEHVDHIVDMRRYQVMMESEFPSELSVLFKNLENKGNPWGQNAADRTNWIDEVDFDVPVYGQDVDSFDGYEYLFWVGCAGAYDDKAKKTTKAVAELLAVAGVKYLVLGAGETCNGDSARRSGNEFLFQQLAQQAVETLDGLFDGVQTVDRKIVVTCPHCFNTLGKEYRQLGAHYTVLHHTQLLNRLVRDQKLVPVTPVSQDITYHDPCYLGRHNKVYEAPRELIGAAGANLTEMPRHAERSFCCGAGGARMWMEEHIGKRINHERVDEALATNAAAIATGCPFCRVMVTDGVNDRQEEAGRSGVEVLDVAQVLLGSLDHDKATLPAKGTAAREAEERAAKAEKAAPKAAAPSAPAQAPATPPAEEAETPAAVTPAAPAPVKGLGIAGGAKRPGAKKAAATTAETPTPPAPAAPAAPVKGLGIAAGAKRPGAKKAAAPTTEPEAPAAAEPEPEAKQPEPAAQPDGQTAPPAAPAAPVKGLGIARGARPPGKR
>NZ_AP022575.1|WP_083051830.1|3434480_3436961_+|helix-turn-helix-transcriptional-regulator
MRYEHVARLAEDGDPVTASASELPPAARGVIRDLMNAATLPVKVLISGGLGTGKSTVLAAARETLRRAGLNVLARPPRDGDPLDAAFVVDDAHLLSDAELLQLTERVADARATVVVAAEAHEQHPALRALATAVERDRPRISLGPLPVAEHLRDCTAGLPFLVHAVSDGSRPSAQAAKTALIERLRRLDEPALDTLLVMSLTPELGTTDVAAALGISATDARRLVDRAHASGLTGPAHPPAFLRSVHEAVAHIVGNAHHNEVETSLLRSQLDIATVSPELALRLAEHGLRDDRLAGILARYAADARADSVRAARLYRAAVGAGAEGLTSRLADALALTGDCAAAATLADDLLTSSDSADRAAAVRIAASVATHDGNTGQAAELFGWLGPHSDPVVGAAAAIVFAATGDQASARAALRLNDAGPPTMAARAARGLAEGLLLSIDQPYPAAMARLGQALAVGQSIGEVLPDSPAALVTLAAIHGGDPVRARGVIGRAVHAGGDALFRGRHLLLSGWIKMQDGQLPSATADVTAAGAELHRRDALWAAALRTAVARRSGDIGALQKHWCAARDVLAEHSVDLFTLLPVGELWVAAARLRQLDQLQHTVDQAFTLLDSLGNPTLWSIPLHWAGVHAGILANSPESVAPHGQALSAAAGHSTLARALAGAGRTWLRVLADRVDADEVTAAARALSRAGLTSDATRLAGQAALQTPDARVSGAMLQLARDLKLSVSPSGTPSEPADAQPPTTGPSAARQPRPGTPLSDREREVAELLLLGMPYRDIGGQLFISAKTVEHHVARIRRRLGAGSRSEMLSMLRAMLAPPGESRS
>NZ_AP022575.1|WP_083051827.1|3433748_3434291_-|hypothetical-protein
MANSLLDFVISLVRDPEAAARYAANPAQAIANAHLTNVTSADVNNLIPVVSDSLSMAAPAGAAAGAPVADHGNVWATGAAAAALDAFSSHTPTPAAQHHGPASGVINPPGSPGSVEVPTNPQPLGTGPHEPSVLLTGAEMADPAFAHGDEFPTEDPAIWDHSVIQPHAAEPNHHGFDIHG
>NZ_AP022575.1|WP_083051824.1|3431405_3433544_-|hypothetical-protein
MNMTSLVDYILSLFRSEHAARSFVAAPGQAMTNAGLINVSPAEFSWVAANMVPGLALDPGDPIGGVRQAVAERHGLASASDPGVGSTVVAQDAGVVAGDAGVVVGGAGLVAAEAGAGMATVAAADIGGGLTGGFGAGVLGQGGLGWQTGVVGFFPGLGFAEATGGFASQVGLGAQAGLGFGVGVQAGVGAQVGAGFGLGVGAQTGLGAQAALGVSGGFEAGLAAHVGGQAAIGGQVGAGFAGGGGLGLSGAIGGSAAGGIAAGVAGQAGGAIGGSAGGAIGAGAGVAGRFGGNSQIGVGGQPGGVVVGQVGAGGQAAVGAGGQAGIGVGGQAAVGGQAGVGAAGAVGGQAGIGIGGQAGGAIGGAAGLGGQVGVAAGGAVAGQAGLAGQAGLAGQAGLAGQAGIAGQAGLVSQAGLGLVGQTALGGQAGIAAGGGLAGAGSVGGLTNIGGNAALGAGASSQAGLIASEGAALSGAAMPHVSGPLAGVGVGGQAGAADGAGLGIGGASAGHPPTQPAVISAGAGMGAQAAAGGGAAAGAGGGTELGGQAGIGGGTGLAGQAAAAGGTAAGGAGALGDILGDEGATLGGGGGVSGGVTPVEHGPTLPGGHGPVIQGGTGVGGHVTPPSGGAVVQSPAGHGGMNPPVINAPAPHTPTPTPAAPAPVVPPTEHAPVEPPVHHEPPTVSGHEPPVTHEPPVHIEPPASHGPFGLPGF
>NZ_AP022575.1|WP_163663086.1|3429791_3431159_-|DUF222-domain-containing-protein
MHSSSREEIVAVFDALDAALDRALDLSIDVLTTPECLTMLERCETLRRRLPAIEHPFINKLADQADPSELGGKLPFALAERLRITRGEAARRIGEAAELGPRRALTGEVLPPLLTATAEAQRAGQLGTQHVQIIRSFLHQLPSRVDLPTRDKAEAELAGLGGQFRPDQLHKLAAKLADCLNPDGNFTDTDRARRRGIILGKQGADGMSAITGYLTPEARATVDAVLAKLAAPGMANPADPTPCVAGTPSQAAIDADTRSTAQRNHDGLQAALRALLCSGELGQHNGLPAAIIVSTSLAELQSAAGHALTGGGSLLPMSEVIRLAAHAHHYLRIFDHGRELALYHTKRLASPAQRIVLYAKDRGCSFPNCDVPGYLTEVHHVTDYSECRETDIDKLTQACGPHHKLATSGGWITRKRKDGTTEWLPPAHLDHGQPRTNSYFHPEKLLHKDDDDDDP
>NZ_AP022575.1|WP_083050433.1|3427693_3429535_-|isoniazid-induced-protein-IniA
MTQPDDPRRVGVIVELIDHTVAIAKLHDRTDLVQRLRRARERITDPQIRVVIAGQLKQGKSQLLNALLNLPVARVGDDEATVVITVVSYSDQPSARIVVAVGPNGETAAVDIPVDDINTDLRRAPQANGRNVLRVEIGAPSPLLRGGLVFIDTPGVGGHGQPHLSATLGLLPDADALLMVSDASQEFTEPEMWFIRQASQICPVGMVVATKTDLYPHWREIVNTNAAHLQRARVPMPIIGVSSLLRSHAVTLNDKELNDESNFPAIVTFLSERVLSRETDRVRDQVLHEIHSAAAQLATSVGSELSAVNDPDLRDRLAADLERRKREAQDALQQTALWQQVLGDGFTDLSADVEHDLRARLRAVIDDAERQIDSCDPTQHWAEIGNDVENAIATAVGDNFVWAYQRAEALAEDVARSFADAGLDSVMSPELSARVMGSDFGRLKALAPMESKPLRKGQKMIIGMRGSYGGVVMIGMLSSVVGLGLFNPLSVGAGLILGRMAYKEEKHNRLLRVRNEAKTNVRRFVDEVSFVVGKESRDRLKTIQRTLRDHYREIADEITRSLNESLQATITAANLEEAQRDNRVRELQRQRDILNQVADHLDKLTPPVTLGRA
>NZ_AP022575.1|WP_083051849.1|3444893_3445637_-|respiratory-nitrate-reductase-subunit-gamma
MTSLLWMAAPYVAFTSFVLGHIWRYRTDQFGWTTRSSQIYESRLLQLGSPLFHFGLLGVFGGHVVGLLVPQSWTAAVGISEPAYHLMAVTMGSLAGFAVVAGLGILLYRRITVSAVRRATTRSDQLMYLLLVAALATGMLNTLTNVFASYNYRDTVSPWFRSLFSLHPAAELMAHTPWTFQLHALIVLALLAIWPYTRLVHMFSAPVGYLVRPYLVYRSQDPKKTSGNRYAKAWVAPEAPPARSRWV
>NZ_AP022575.1|WP_083051852.1|3445633_3446308_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MKMLTLTRGRAGERAGLAERDQRLVWRIAALLLDYPGAQLLALTDQLATAARELPASVGGPLLEFLGEFGDADPLRLAARYVETFDMRRSATLHLTYYAYGDTRKRGMALLRFKHAYRQAGLQLDDGELPDYLPLVLEFAATIDPGRGERLLGEHVPVLELLRRSLAQGGSPYAIVVAAVLATLPPISSADHRRIAELAAQGPPGEDVGLEPFAMDPLTAGGRR
>NZ_AP022575.1|WP_083051858.1|3446304_3447891_-|nitrate-reductase-subunit-beta
MAQLAMVMNLDKCIGCHTCSVTCKQAWTNRAGVEYAWFNNVETRPGQGYPRQYQDQEKWKGGWTLNKRGKLTLRSGSRLRRLVNIFANPHLPTVSDYYDPWTYDYESLLSAPAMDTTPVARPKSLITGEDTKVTWGANWDDDLGGGPEQVGRDPLLAKVSDKVKLEFEQAFMFYLPRICEHCLNPSCAASCPSGAIYKRSEDGIVLVDQDRCRGWRQCVTGCPYKKIYFNHKTGKAEKCTFCYPRVEVGMPTVCSETCVGRLRYIGVLLYDADAVAAAASVPNERDLYPAQLGVFLNPHDPRVVAEAERAGISGEWIEAAQHSPVYRLIVDYQLALPLHPEYRTLPMVWYIPPLSPVVDILTETGHDGENSNNLFGAIDALRVPVEYLAELFTAGDVGPVRLALQRLAAMRSYMRAANLGEEFDDTIPASVRLSGDEIEAMYRLLAIAKYHDRYVIPSGAGADAHRLDALATGCSLDGDGGPGMTAFDAVVSKFHLTNGDGAAARDKPVRVNLLNWDGKSTDGLVPTT
>NZ_AP022575.1|WP_083051855.1|3447902_3451568_-|nitrate-reductase-subunit-alpha
MVDLNQNRQSAADALLGLSKYFHRGEISPDHRALHKIGGRSADDFYRERWAHDKVVRSTHGVNCTGSCSWKIYVKDGVITWESQQTDYPSVGADKPEYEPRGCPRGASFSWYTYSPARVRYPYVRGVLLRYYREAKERLHDPVLAWADVVDDPVKSARYKAARGKGGFVRVEWWEAAEIAAAAHVHTIKRYGPDRVAGFSPIPAMSMVSHAVGARFISLLGGSMLSFYDWYADLPVASPQVFGDQTDVPESADWFDAGYLIMWGSNVPVTRTPDAHYMTEARYRGQKVVVVSPDYADNTKFADEWLPARPGTDAALAMSMGHVILKEFFVETTTPYFCDYVKKYTDLPFLVTLAERDGAWLPGKFLTAADLGDTAEGSSSKTVLLDAAGNPVVPNGSLGHRFTASGEGKWNLDLQGVDPLLTLYGAHGELTAVQLPRFDGERPGVLTRGVPTKTIAGQRVTTVFDLLLAQYGVYRDGLPGDWPTSYDDAAAPYTPAWQEPITGVPAAAAARIAREFADNARRSRGRSMILMGAGTNHWFHSDQIYRSFLTLVMLTGCQGVNGGGWAHYVGQEKCRPVTGWSTLAFGLDWQRPPRQMQGTVFWYLSTDQWRYDRFTSEVMASPLAEGKFAGRTAADNIALASRLGWMPSYPTFNRNPLDLADEAIRLGKDPSQHVVDGLKSGHLQFACEDPDAPENFPRCLTVWRSNLLGSSAKGNEYFLKHLLGTDSNVAARERDAVRPQEVRWRAEAPVGKLDLLLSLDFRNTSTTLFSDVVLPAATWYEKHDLSSTDMHPFVHAFSPAISPPWETKTDFEAFHRIARGFSWLAEKHLGTRKDIVAVPLQHDSADATAQPGGRVQDWKAGECEPIPGKTMPRLVVVERDYAAIAEKMAALGPMVETVGLTVKGVTTHPDAEVEYLRGVNGAVVSGVAVGRPSLAKDTHAAEAILALSGTTNGRLAVEGFEALQRRTGVPLADLAKESEGRRISFADTQSRPVPVNTSPEWSGSETGGRRYSPFTINTERLKPWHTLTGRQHFYLDHDWMAELGEQLPIFRPPLDMTALFDEPAVGDTSGGITVRYLTPHSKWSIHSAYQDNLYMLTLSRGGQAIWMSDVDAAKIGVKDNDWIECTNRNGVVNARAIVSHRMPEGLVFMYHAQDKAVDVPRTEKTGKRGGIHNALTRIMIKPSHLIGGYAQQSFALNYHGPTGNQRDEVTTIRRRSQEVEY
>NZ_AP022575.1|WP_142272197.1|3451766_3452099_+|hypothetical-protein
MDHDNNPRLGRHNAEFSIFRGVYMRVVGRGMSGVGGPVSGEASISTHAIPRVSAPLIASAVSEIGFMLLAVLVTILTPRCQTGHLTPAVTEFTCGTSDLPWYEVARGDQP
>NZ_AP022575.1|WP_163663089.1|3452111_3453479_+|DUF222-domain-containing-protein
MHSSSREEIVEVFDALDAALHRALDLSIDVLTTPECLTMLERCETLRRRLPAVEHPFINKLADQADPSELGGKLAFALAERLRITRGEAARRIGEAADLGPRRALTGEVLPPLLTATAEAQRAGRLGTQHVQIIRSFLHQLPSGVDLPTRDKAEAELAGLGGRFRPDQLHKLAAKLADCLNPDGNFTDTDRARRRGIVIGKQGADGMSAITGYLTPEARATLDAVLAKLGAPGMANPADPTPCLSGTPSQAAIDADTRSAAHRNHDALQAALRALLCSGELGRHNGLPASIIVSTSLAELEARAGHALTGGGSLLPMSEVIRLAAHAHHYLRIFDHGRELALYHTKRLASPAQRIVLYAKDRGCSFPNCDVPGYLTEVHHVTDYSQCRETDINDLTQACGPHHQLATTGGWATRKRRDGTTEWLPPAHLDHGQPRTNAYFHPEKLLHNDDDEDDP
>NZ_AP022575.1|WP_083045682.1|3453699_3454866_-|NAD(P)/FAD-dependent-oxidoreductase
MSKAVLILGAGVGGLTTADTLRQLLPPEIRIVLVDKGFDGTLGLSLLWVLRGWRQPDEVRVRATAASLPGVELVTATVGHIDIPAQAVHTDAGVIGYDALVIALGATLDTAAVPGLSEALDAGVAGQFYTLDGATGLRAKVDELDRGRIAVLIAGVPFKCPAAPYEAAFLLAAQLGDRFDSETVRIDTFTPDPLPMPVAGPEVGEALVALLKDRGIGFHPRKTIARVDAAETTLHFGDGTAEPFDLLAVVPPHAPSAAARSAGLGEAGWIPVNPQTLSTGVDNVWAIGDATVLTLPNGKPLPKAAVFAEAQAEVVAHRVARQLGYDAPERFFTGWGACYVETGDHQAAKGEGNFLHAPAPSVTLYPPSRAFHDEKVAQERAWLDRWNR
>NZ_AP022575.1|WP_083045819.1|3455070_3455811_+|TetR/AcrR-family-transcriptional-regulator
MPRTIPADRFSAIVAASARVFITHGYQRTQVQDVADALALAKGTLYGYAQGKAALFAAAVRYGDAHEPLPPPSDLPVAAPHDGEIAALVSDRLAGEVADMRLTLALHEALPPDTTPASARAELAGIVTDLYRRLARHRIALKLVDRCAPELPDLAQVWFGTGRDVQVNAVQTYLLRRQRAGQLRLPGPAPVVARTIVELCALWAVHRHFDPWPEPASTARPGENDDAVAATLAEFVVRATATADVN
>NZ_AP022575.1|WP_083045683.1|3455835_3456462_+|class-I-SAM-dependent-methyltransferase
MPVTAAARRYLSSQAARPRGAFGRLLGRIWRTETAGVNRVALELLAPAPGERICEIGFGPGRTLGLLAGAGAEVIGVEVSATMLAVAARYNAKSIAAGLISLRRGDGIRLPIADHSLDKVLSVHNFYFWPDPRTSLHDIARALRPGGRLVLTSLSDDRPLAARFDPAIYRLPTTGETTAWLRAAGFIDVCITRRSACESTVWFTATAT
>NZ_AP022575.1|WP_163663092.1|3456518_3456884_-|hypothetical-protein
MNLKRLVSHAMVAGGIGFLSAVGPGVGVAAADWPVIPPPPLPDVNVPPVNVPPVNVPDVNVPPVNVPPVNVPDVNVPPVNVPPVNVPDVNVPPVNVPPVNVPDVNVPPVNVPPINLPNVNF

Crispr_ID: NZ_AP022575_15

• CRISPR_ID: NZ_AP022575_15
• CRISPR_location: 3501575-3501662
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP022575_15

Consensus_repeat	Method
CGCCGAGCTCAAGCCCGATTGCCCGGCTC	CRISPRCasFinder

spacers of NZ_AP022575_15

>15.1|3501604|30|NZ_AP022575|CRISPRCasFinder
CTCCTCGGTCCGCCACGCGGACCGCATCGT

CRISPR arrays and Neighbor proteins around NZ_AP022575_15

CRISPR arrays

The CRISPR arrays of NZ_AP022575_15

>merge|NZ_AP022575|15|3501575-3501662|CRISPRCasFinder
CGCCGAGCTCAAGCCCGATTGCCCGGCTCCTCCTCGGTCCGCCACGCGGACCGCATCGTCGCCGAGCTCAAGCCCGATTGCCCGGCTC

>NZ_AP022575|15|11|3501575-3501662|CRISPRCasFinder
CGCCGAGCTCAAGCCCGATTGCCCGGCTC	CTCCTCGGTCCGCCACGCGGACCGCATCGT
CGCCGAGCTCAAGCCCGATTGCCCGGCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083045722.1|3503861_3504290_+|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350245
NZ_AP022575.1|WP_083045723.1|3504302_3505211_-|DUF2236-domain-containing-protein	unknown	unknown	gnl|CDD|226188
NZ_AP022575.1|WP_083045724.1|3505299_3506013_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_AP022575.1|WP_142271797.1|3488007_3489417_-|type-VII-secretion-integral-membrane-protein-EccD	unknown	unknown	gnl|CDD|274855
NZ_AP022575.1|WP_083045717.1|3496877_3498512_-|type-VII-secretion-protein-EccB	unknown	unknown	gnl|CDD|368288
NZ_AP022575.1|WP_083045727.1|3509019_3510024_-|DUF732-domain-containing-protein	unknown	unknown	gnl|CDD|368380
NZ_AP022575.1|WP_083045712.1|3490390_3490681_-|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl|CDD|227179
NZ_AP022575.1|WP_083045725.1|3506004_3506589_-|VOC-family-protein	unknown	unknown	gnl|CDD|366361
NZ_AP022575.1|WP_083045719.1|3500653_3501559_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|225852
NZ_AP022575.1|WP_083045721.1|3503579_3503837_+|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl|CDD|279710
NZ_AP022575.1|WP_083045716.1|3492900_3496881_-|type-VII-secretion-protein-EccCa	unknown	unknown	gnl|CDD|274858
NZ_AP022575.1|WP_083045827.1|3506929_3508063_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|378820
NZ_AP022575.1|WP_083045711.1|3489480_3490380_-|ESX-secretion-associated-protein-EspG	unknown	unknown	gnl|CDD|379414
NZ_AP022575.1|WP_083045726.1|3508351_3508657_-|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl|CDD|376835
NZ_AP022575.1|WP_083045714.1|3491054_3492584_-|PPE-family-protein	unknown	unknown	gnl|CDD|366325
NZ_AP022575.1|WP_083045713.1|3490721_3491015_-|type-VII-secretion-protein-EsxS	unknown	unknown	unknown
NZ_AP022575.1|WP_158084735.1|3503236_3503383_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP022575.1|WP_083045728.1|3510550_3512749_+|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173841
NZ_AP022575.1|WP_083045715.1|3492589_3492898_-|PE-family-protein	unknown	unknown	gnl|CDD|376422
NZ_AP022575.1|WP_142271798.1|3498508_3500395_-|type-VII-secretion-AAA-ATPase-EccA	unknown	unknown	gnl|CDD|188437

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083045726.1|3508351_3508657_-|metal-sensitive-transcriptional-regulator	gnl|CDD|376835	pfam02583, Trns_repr_metal, Metal-sensitive transcriptional repressor. This is a family of metal-sensitive repressors, involved in resistance to metal ions. Members of this family bind copper, nickel or cobalt ions via conserved cysteine and histidine residues. In the absence of metal ions, these proteins bind to promoter regions and repress transcription. When bound to metal ions they are unable to bind DNA, leading to transcriptional derepression.	1.9352e-30
NZ_AP022575.1|WP_083045723.1|3504302_3505211_-|DUF2236-domain-containing-protein	gnl|CDD|226188	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown].	1.63061e-95
NZ_AP022575.1|WP_083045724.1|3505299_3506013_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.34875e-05
NZ_AP022575.1|WP_142271797.1|3488007_3489417_-|type-VII-secretion-integral-membrane-protein-EccD	gnl|CDD|274855	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD. Members of this family are EccD, a component of actinobacterial type VII secretion systems (T7SS) with ten to eleven predicted transmembrane helix regions. [Protein fate, Protein and peptide secretion and trafficking].	3.42137e-72
NZ_AP022575.1|WP_083045717.1|3496877_3498512_-|type-VII-secretion-protein-EccB	gnl|CDD|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	0
NZ_AP022575.1|WP_083045727.1|3509019_3510024_-|DUF732-domain-containing-protein	gnl|CDD|368380	pfam05305, DUF732, Protein of unknown function (DUF732). This family consists of several uncharacterized Mycobacterium tuberculosis and leprae proteins of unknown function.	1.62553e-11
NZ_AP022575.1|WP_083045714.1|3491054_3492584_-|PPE-family-protein	gnl|CDD|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	5.74892e-58
NZ_AP022575.1|WP_083045725.1|3506004_3506589_-|VOC-family-protein	gnl|CDD|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	1.29283e-19
NZ_AP022575.1|WP_083045719.1|3500653_3501559_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|225852	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	1.74141e-95
NZ_AP022575.1|WP_083045722.1|3503861_3504290_+|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350245	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC25, VapC29, VapC33, VapC37, and VapC39 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	7.78463e-57
NZ_AP022575.1|WP_083045716.1|3492900_3496881_-|type-VII-secretion-protein-EccCa	gnl|CDD|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_AP022575.1|WP_083045827.1|3506929_3508063_+|alpha/beta-hydrolase	gnl|CDD|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	0.000101335
NZ_AP022575.1|WP_083045711.1|3489480_3490380_-|ESX-secretion-associated-protein-EspG	gnl|CDD|379414	pfam14011, ESX-1_EspG, EspG family. This family of proteins contains the the EspG1, EspG2 and EspG3 proteins from M. tuberculosis. These proteins are involved in the ESAT-6 secretion system 1 (ESX-1) of Mycobacterium tuberculosis which is important for virulence and intercellular spread. Proteins in this family are typically between 254 and 295 amino acids in length.	3.08427e-49
NZ_AP022575.1|WP_083045712.1|3490390_3490681_-|WXG100-family-type-VII-secretion-target	gnl|CDD|227179	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown].	2.41756e-17
NZ_AP022575.1|WP_083045721.1|3503579_3503837_+|ribbon-helix-helix-protein,-CopG-family	gnl|CDD|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	0.00412198
NZ_AP022575.1|WP_083045728.1|3510550_3512749_+|acyl-CoA-dehydrogenase	gnl|CDD|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	3.59466e-145
NZ_AP022575.1|WP_083045715.1|3492589_3492898_-|PE-family-protein	gnl|CDD|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	1.28072e-10
NZ_AP022575.1|WP_142271798.1|3498508_3500395_-|type-VII-secretion-AAA-ATPase-EccA	gnl|CDD|188437	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA. This model represents the AAA family ATPase, EccA, of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccA1, EccA2, etc. [Protein fate, Protein and peptide secretion and trafficking].	0

Protein sequences

>NZ_AP022575.1|WP_083045719.1|3500653_3501559_-|class-I-SAM-dependent-methyltransferase
MRTEGDSWDITTSVGSTALFVAAARALEAQKPDPLAVDPYAELFCRAVGGSWADVLDGTAPDHQLRSADFGVHFVNFQGARTRYFDGYFRRAADAGARQVVILAAGLDSRAYRLPWPDGTIVYELDRPQVLDFKREVLAGHGAQPRAERREIAVDLRDDWPEALRDSGFDPGKRSAWIAEGLLFYLPADAQEQLFTGIDTLAGRGSHVAVEDGAPLPPDEFAAKVEEERAAVAKGDQLPFFQLVYNERCAPAAEWFVQRGWTAVGTPLNDYLREVGRPVPGPGSEAAPMFSRNTLVSAVRP
>NZ_AP022575.1|WP_142271798.1|3498508_3500395_-|type-VII-secretion-AAA-ATPase-EccA
MSAGDGAGVERGDISMLTAQPVGSRVNGKVDADVISRFATCCRALGIAVYQRQRPADLTAARSGFAALTRIAHDQCDAWTGLAAAGDQSIGVLEAIWRTAATAGMLQRQVELAPGALGFLYDTGLYLRFRATGPDDFQLAYAAALAATGGPGEFANANHIVAGITERRPSWREARWVAVVLNYRAERWSDVVKLLTPIVNDPDLDEAFAHAAKITLGTALARLGMFAPALSYLEEPDGPVAVAAVDGALAKALVLRAHVDEESASEVLQELYAAHPENEQIEQALSDPSFGIVTTTAARIEARTDPWDPATEPGADDFVDPAAHERKAALLHEAELQLAEFIGLDEVKNQVSRLKSSVAMELVRKQRGLTVAQRTHHLVFAGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDGVLFLDEAYALVATGAKNDFGLVAIDTLLARMENDRDRLVVIIAGYRADLDKFLDTNEGLRSRFTRNIDFPSYTSHELVEIAHKMAEQRDSVFEQAALDDLEALFAKLATESTPDTNGISRRSLDIAGNGRFVRNIVERSEEEREFRLDHSEHAGTGEFSDEELMTITADDVRKSVEPLLRGLGLSVPA
>NZ_AP022575.1|WP_083045717.1|3496877_3498512_-|type-VII-secretion-protein-EccB
MSRREPDREWDPEREAARRSFSSRTPVNENPDKVVYRRGFVTRHQVTGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVLMGVLLLITGLIGCFVFSLIRPNTQAASNQILADRSTAALYVRVGDELHPVLNLTSARLIVGRPLNPTTVKSAELDRFPRGNLIGIPGAPERMVQNNSRNADWTVCDTIGGPAGRAVHSMGVTVIAGRPDSEGTRAGPLPAGQVILVDSGAGTWLLWDGKRSRIDLADHAITNALGLGLSDPAIPAPRPVASGLFNAIPEAPPLTAPVIPDAGSPANFAVPAPIGAVVTAYSLDTTPSDTYYAVLPDGLQPISPVLAAILRNTNSYGLQQPPRLGADEVARLPVSRMLDTARYPSQPVSLVDMAGNPVICAHWSKPAGAATSSLTLLAGSEPPVTVRTVELVGAGQGGGASRVALAPGTGYFVQSVGGGATAPATGSLFWVSDTGVRYGIDTETSEVAGDIGTTGRGKTVAALGLNEPAVPIPWSMLTLFAAGPTLSRADALLAHDSLPPDSRPGRAVSVRGEPR
>NZ_AP022575.1|WP_083045716.1|3492900_3496881_-|type-VII-secretion-protein-EccCa
MSRLIFEARRRLAPPSTRKGTITIEAPPELPRVIPPSLLRRALPYLIGILIVGMIVALVATGMRVISPQTLFFPFVLLLAATALYRGNDNKMRTEEVDAERADYLRYLSVVRDNIRVQAAEQRAAAQWSHPEPDALAAVPGSRRQWERDPHDPDFLVVRAGRHCAPLATAVRVNDTADEIDLEPVSHSALRSLLDTQRTVRDVPTGIDLAKVSLITVLGEVPEVRAAIRAWIAQAVTWHDPTVLGVAMAGPDLESSDWSWLKWLPHVDIPGQVDGVGPARYLSTDADELVELLGPALADRPAFIGESSGALRHLLIVVDDPDYDLKASTLAVGRAGVTVVHCSATPPHREQYSDPERPILRIVDGAIQRWQTGGWQSYIDVADHYGADEASHLARRLSRWDSNPTHTGLRSAATRGASFTTLLGITDASRLDVPALWAPRRREDELRVPIGVTATGEPLMFDLKDEAEGGMGPHGLMIGMTGSGKSQTLMSILLSLLTTHSADRLIVIYADFKGEAGADSFRDFPQVVAVISNMAEKKSLADRFADTLRGEVARREILLREAGRQVQGSAFNSVLEYENAIAAGHDLPPIPTLFVVADEFTLMLADHPEYAELFDYVARKGRSFRIHILFASQTLDVGKIKDIDKNTSYRIGLKVASPSVSRQIIGVEDAYHIESGKEYKGVGFLVPAPGATPIKFRSTYVDGIYEPPQMAKTLVVQSVPEPKLFTAGAVAADPGTVISGADEEEPTGPPRKLIATIGEQLARYGPRAPQLWLPPLDEPIPLSALLARAGVSPRQWRWPLGEIDKPFEMRRDPLVFDATSSAGNMVIHGGPKSGKSTALQTFILSAASLHSPRDVTFYCLDYGGGQLRALQDLAHVGSVASALEPERIRRTFGELEQLLLSRQQRELFRDRGGDGAVADDGFGEVFLVIDNLYAFGRDNTDPFNTRNPLLAKVTELVNVGLAYGIHVIISTPSWLEVPLAMRDGLGLRLELKLHDPRDSNVRVVGALRRPADAVPHDQPGRGLTMAAEHFLFASPALDAETNTVPALNARYPGMAAPPVRLLPTNLAPEALGAPYRGPDRVVIGQREEDLAAVVLDFVENPLLMVFGDSKSGKTTLLRHIIRTIREHSSADRVAFTVLDRRLHLVDEPLFPDNEYTANIDRIIPAMLGLANLIESRRPPAGMSAAELSRWTYHGHTHYLIIDDVDQIPDSAAMTGPYIGQRPWTPLLGLLAQAGDLGLRVIVTARASGSAHALMTNPLLRRFNDLQATTLMLAGNPADSGKIRGQRFARLPAGRAILLADNPTYVQLVNPLADAAAMFGETQQKGS
>NZ_AP022575.1|WP_083045715.1|3492589_3492898_-|PE-family-protein
MTLRVVPEGLAAASAAVEALTARLAAAHAEAAPLITAVVPPAADPVSLQTAAGFSAQGQEHAVIAAQGVEELGRAGVGVGESGVSYLAGDAAAAATYGIAAG
>NZ_AP022575.1|WP_083045714.1|3491054_3492584_-|PPE-family-protein
MAPIWIASPPEVHSALLSSGPGPGPLLAAAAAWNALSAEYAAAATELGGLVGAVQAGAWQGPSALRYGAAHAPYVAWLTQASVDAAGVAAQHEAAAAAYNAALVAMPTLAELTANHVMHGVLVATNFFGINTIPIALNEADYVRMWIQAATTMGVYQAVSGTALATAPRTTPAPTVVTPGETVGAAANAALPAAEGAVAADPWQWLWQLLVQLWNAYTGFYSWMFQLIFEFLQDPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQVFFNIVGWPTWGMVLSSPFLLPVGLSLGLGALALLPTQIAPVLIPAATAPVFAAATVAQSGWPAAGLTSSTVTGTAGAPAAGAGAGAGAGAAPAPVASATATLPYVVGGGGDWGPSVGPTVGGRGGLKAPAATIPAAGAAAASRAATRAKRRRRAELRDYGDEFLEMDSSVDPDYGAQASDHGAGTLGFAGTMRTVTVLQAAGLTALAGDEFGGGPRMPMVPGTWDRGAAKGGDNGFQRDSE
>NZ_AP022575.1|WP_083045713.1|3490721_3491015_-|type-VII-secretion-protein-EsxS
MSLLDAHIPQLVASQSAFAAKAGLMRHTIAQAEQAAMSAQSFHQGESAAAFQAAHARFVEVAARINTLLDIAQANLGEAAGTYVAADSAAASSYTAF
>NZ_AP022575.1|WP_083045712.1|3490390_3490681_-|WXG100-family-type-VII-secretion-target
MSQIMYNYPAMVAHAGDMASYAGTMQGLGADIAAEQAALSNAWQGDTGMTYQAWQAQWNQAMDDLVRAYQSMAGTHEANTMAMMARDQAEAAKWGG
>NZ_AP022575.1|WP_083045711.1|3489480_3490380_-|ESX-secretion-associated-protein-EspG
MDAEPNAVELTVENAWFIAETVGAGSFPWVLAITTPYRDAAQHAAFLDRQKQELTRMGLVEPDGPKAGTVNAAVAAWIKLVCFPDRWLDLRYVGPASANGDCDVLRGIVAQRAGVGGTGSQVANTVVALRSAQLVTFTAMNIDDPRSLVPVLDVGLAHRSPARFEEFSMPMRVGARADERLRSGTPLGEVLDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGQHSTTEVGVSIVDTTAGRVLVSPSRAFDGEWVSTFSPGTAFAIAVAIERLTAWLPDGQWFPGHRLSRDFSAQLS
>NZ_AP022575.1|WP_142271797.1|3488007_3489417_-|type-VII-secretion-integral-membrane-protein-EccD
MSGTVMPIVRVAILADSRLTELALPAELPLREILPAVQRLVAPSEQNGEADTDVPAHLSLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPAGPAAPGIVEDIADAAMIFSSSRRNPWGSTHIRRGALAAVIGVAVAATGWSVSYRVGTGALAGLLAVGGIAAALAVAGLLVTTRFPRTGSALSITALAPIGAALALAVPGSFGAAQLLLAAAGVSTWSLITLMLPSAERERVVASFTAVAVIGAGVVLAAGAELLWPLPMLSIGCGLIVAALLVTIAAPALSALCARFPLPVIPAPGDPTPSAPSLRVLADLPRRVRVSDAHQTGFIAAAVLLSVLGSVAIAVRPEALGGVGWYVVAATAAAATLRARVWDSAACKAWLLAQPYLVAGTLLVCYAATGRYLAAFGAVLVLTVLALAWIVVALNPGIAAPESYSLPLRRLLGFVAAGLDASLIPVMAYLVGLFGWVLNR
>NZ_AP022575.1|WP_158084735.1|3503236_3503383_-|hypothetical-protein
MALRVIPEGPTVASARVEASNVRGAGARRGAAMLAAAPAVDPISRGMP
>NZ_AP022575.1|WP_083045721.1|3503579_3503837_+|ribbon-helix-helix-protein,-CopG-family
MRTTVSISDELLAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGLDLTSNRALSEVLDEGLELNSRM
>NZ_AP022575.1|WP_083045722.1|3503861_3504290_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MFLLDVNVLLAAHRGDHPNHQTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPRADAFAFIDAVTAQPHHLPTNPGPRHLALLRKLCDEADASGDLIPDAVLAAIAVEHHCAVVSLDRDFARFTSVRHVHPAV
>NZ_AP022575.1|WP_083045723.1|3504302_3505211_-|DUF2236-domain-containing-protein
MVMHQTVQRPIPHVERPIADPARPRPGGRRRRIAADRGLMGVALLAGPANVIMELALPAVGYGVLESRVESGRIDRHPIKRARTTFTYLAVAVAGTDAQKAAFRRAVNGAHAQVHSTPDSPVSYNAFDPDLQLWVAACLYKGAVDVHRVFVGEMDEEEADRRYREGMALATTLQVPPQMWPPDRAAFDRYWQESLERVHIDDAVRDYLYPIAVSRINGMPLPGPVRRLSESLALLITTGFLPQRFRDEMRLPWDDVKQRRFDRLMAVVGAVNRALPHCVREFPFNLMLWDLDRRIRTGRPLV
>NZ_AP022575.1|WP_083045724.1|3505299_3506013_+|TetR/AcrR-family-transcriptional-regulator
MADPAGLTGSSSARPYRGVKAAERLAERRRRLLAAGLDLLGSEQQDISGLTVRAVCRNAGLASRYFYESFADKDEFVAGVFDWVVAELATTTQAAVAAVPAHEQARAGMANIVRTIADDPRIGRLLFSTQLADAVVVRKRAESTALFAMLSGRHAIDVLRAPADEAITAAAHFVVGGVGQTISAWLAGDVRLQPDQLVDLLASLLNELADPNLVRPRVTAAAPPDAAASRAATGASG
>NZ_AP022575.1|WP_083045725.1|3506004_3506589_-|VOC-family-protein
MIKPHNANTEFELSGINHVALVCSDMARTVDFYSNVLGMPLIKSLDLPGGQGQHFFFDAGNGDCVAFFWFADAPDRVPGISSPDAIPGIGDITSAVSTMNHLAFHVPPEKFDVYRKRLKEKGVRVGPVLNHDESPMQVSATVHPGVYVRSFYFQDPDGITLEFACWIKEFTERDTPAVPRTAADRRRGALCDSP
>NZ_AP022575.1|WP_083045827.1|3506929_3508063_+|alpha/beta-hydrolase
MTGHAGTAGVIREFVGLPSPTAGRAGAGGHPCQGLYHRGVGRKPKVAVIATHYQIDFSEHYLADYMAIRGVGFLGWNTRFRGFESSFLLDHALVDIGVGVRWLRETQRVETVVLLGNSGGGSLMAAYQSQAVDPNVTPLDGMRPAAGLAELPAADGYVATAAHPGRPDVLTAWMDGAVIDENDPVATDPDLDLFNGRNGPPYSPEFLSRYRAAQVARNHAITDWAEMELKRVRAAGFSDRPFTVMRTWADPRMVDPGIEPTKRPPNQCYAGTPAKANRSAHGIAAACTLRGWLGMWSLRVAQTRAEPHLARITCPALVINAEADTGVFPSDAQRIYDALASSDKTRVSIDTDHYFTTPGARSEQADIIAKWIAKRWR
>NZ_AP022575.1|WP_083045726.1|3508351_3508657_-|metal-sensitive-transcriptional-regulator
MLGGRVETAYGYVSHKDSYAKRLRRIEGQIRGIAKMIDEDKYCIDILTQISAASSALRSVALNLLDDHLDSCVSQAIAQGGTEADVKLSEASAAIARLVRS
>NZ_AP022575.1|WP_083045727.1|3509019_3510024_-|DUF732-domain-containing-protein
MLTGITHRVGTLVGAILVLSGAAILSGGVTAADPNQDEQFLALLDSKEIPALENVPSLIATAHKICRKLDAGVPVDDLVDAMRKHAFNVDSTARLYPPDRVTTTIKRFISAAVEAYCPHDQGKIASIMANFAPGSSEPTHRVVAYPYDAVNSENNLRQRPRALGLTNTPPPRQEPAGTGTGRRSHWMDGGAVVAGRYGSDRWDSDAHDAVLASLIEAAPAGHPVLPNPPQIPTPPPPTAQTLAPPPPIVAPQPPKRSPPPPHQPPQQPPQQPPPQEPPPPQQPPPPQAVEQPADAPQSGGGVGGGGSGGNGGGGPVEPLPPPRPMPPGFVRLAP
>NZ_AP022575.1|WP_083045728.1|3510550_3512749_+|acyl-CoA-dehydrogenase
MPIAITPEHQDLAESVRALVARVAPSEVLHAAMETPLDNPPPYWQAAVDQGLPGVHLPESVGGQGFGIVELAVVLAEFGYGAVPGPFVPSAIASALIAAHDPQATVLAELASGAAIACYALDSGLTATRHGAGDRAALVIRGEIRVVPAAAQASVLVLPVAIDGGEKWVMLRAEQLEIEPVASLDPLRPIAQVRAHAVEVGDDVVLSNLSLTTARALVTTLLSAEAVGVARWATDTASAYAKIREQFGRPIGQFQAIKHKCAEMVADTERATAAVWDAARALDEAGEADDAGVEFAAAVAATLAPTAAQRCTQDCIQVHGGIGFTWEHDAGVYYRRALMLAACFGRASEYPRHVVDTATTTGMRTVDIDLDPDTERLRVEIRAEVAALKQMPREKRAVAIAEGGWVLPHLPTPWGRAASPVEQIIIAQEFTAGRVKRPQIAIAAWIVPSIVAFGTEEQKQRFLPPTFRGDIFWCQLFSEPGAGSDLASLATKATRVDGGWRITGQKIWTTAAQFSHWGALLARTDPSAPKHNGITYFLLDMKCDGVVVKPLRELTGHEFFNTVYLDDVFVPDELVLGEVNRGWEVSRNTLTAERVSIGSNDTNFLATLDQFVEFVRDGQFDQVAQHRAGRLIAEGHAAKLLNLRSTLMTLAGRDAMPSAAISKLLSMRTGQGYAEFAVSSLGAEAAVGDTDRPAGKWGEYLLASRATTIYGGTSEVQLNIIAERLLGLPRDP

Crispr_ID: NZ_AP022575_16

• CRISPR_ID: NZ_AP022575_16
• CRISPR_location: 4168678-4168779
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP022575_16

Consensus_repeat	Method
TTGCCGGGCCGGCGATCGCCACG	CRISPRCasFinder

spacers of NZ_AP022575_16

>16.1|4168701|56|NZ_AP022575|CRISPRCasFinder
GGGCCGATCGTGGCGACCCGTCCCCCGCAAGCGGGAGGTGCCCCCAGCGCCCGGGA

CRISPR arrays and Neighbor proteins around NZ_AP022575_16

CRISPR arrays

The CRISPR arrays of NZ_AP022575_16

>merge|NZ_AP022575|16|4168678-4168779|CRISPRCasFinder
TTGCCGGGCCGGCGATCGCCACGGGGCCGATCGTGGCGACCCGTCCCCCGCAAGCGGGAGGTGCCCCCAGCGCCCGGGATTGCCGGGCTGGCGATCGCCACG

>NZ_AP022575|16|12|4168678-4168779|CRISPRCasFinder
TTGCCGGGCCGGCGATCGCCACG	GGGCCGATCGTGGCGACCCGTCCCCCGCAAGCGGGAGGTGCCCCCAGCGCCCGGGA
TTGCCGGGCTGGCGATCGCCACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022575.1|WP_083050551.1|4177444_4177888_+|aspartate-1-decarboxylase	unknown	unknown	gnl|CDD|376751
NZ_AP022575.1|WP_142272137.1|4171700_4172543_+|dihydropteroate-synthase	unknown	unknown	gnl|CDD|273657
NZ_AP022575.1|WP_163662691.1|4164190_4164487_+|type-VII-secretion-system-ESX-5-protein-EsxJ	unknown	unknown	gnl|CDD|377587
NZ_AP022575.1|WP_083050560.1|4174236_4175505_+|hypothetical-protein	unknown	unknown	gnl|CDD|236090
NZ_AP022575.1|WP_083050591.1|4168107_4168521_+|VOC-family-protein	unknown	unknown	gnl|CDD|319916
NZ_AP022575.1|WP_083050583.1|4165854_4167045_-|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|225052
NZ_AP022575.1|WP_083050577.1|4168845_4171080_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl|CDD|273520
NZ_AP022575.1|WP_083050554.1|4176509_4177445_+|pantoate--beta-alanine-ligase	unknown	unknown	gnl|CDD|234741
NZ_AP022575.1|WP_083051258.1|4161305_4162055_-|SIMPL-domain-containing-protein	unknown	unknown	gnl|CDD|225516
NZ_AP022575.1|WP_083051253.1|4162882_4164124_+|PPE-family-protein	unknown	unknown	gnl|CDD|366325
NZ_AP022575.1|WP_083050565.1|4173058_4173595_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl|CDD|223872
NZ_AP022575.1|WP_083051255.1|4162569_4162869_+|PE-family-protein	unknown	unknown	gnl|CDD|376422
NZ_AP022575.1|WP_083050568.1|4172535_4172934_+|dihydroneopterin-aldolase	unknown	unknown	gnl|CDD|224456
NZ_AP022575.1|WP_158084784.1|4165597_4165765_-|hypothetical-protein	unknown	unknown	gnl|CDD|176223
NZ_AP022575.1|WP_083050557.1|4175601_4176513_+|DUF2520-domain-containing-protein	unknown	unknown	gnl|CDD|227782
NZ_AP022575.1|WP_083050562.1|4173594_4174071_+|DUF3180-domain-containing-protein	unknown	unknown	gnl|CDD|378650
NZ_AP022575.1|WP_083051260.1|4160691_4161300_+|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|223707
NZ_AP022575.1|WP_083052703.1|4164525_4164810_+|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl|CDD|377587
NZ_AP022575.1|WP_083050574.1|4171095_4171704_+|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl|CDD|236472
NZ_AP022575.1|WP_083050580.1|4167041_4168010_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP022575.1|WP_083050551.1|4177444_4177888_+|aspartate-1-decarboxylase	gnl|CDD|376751	pfam02261, Asp_decarbox, Aspartate decarboxylase. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme aspartate decarboxylase EC:4.1.1.11 which requires a pyruvoyl group for its activity. It is synthesized initially as a proenzyme which is then proteolytically cleaved to an alpha (C-terminal) and beta (N-terminal) subunit and a pyruvoyl group. This family contains both chains of aspartate decarboxylase.	5.77051e-78
NZ_AP022575.1|WP_142272137.1|4171700_4172543_+|dihydropteroate-synthase	gnl|CDD|273657	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by model TIGR00284. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	4.40441e-113
NZ_AP022575.1|WP_163662691.1|4164190_4164487_+|type-VII-secretion-system-ESX-5-protein-EsxJ	gnl|CDD|377587	pfam06013, WXG100, Proteins of 100 residues with WXG. ESAT-6 is a small protein appears to be of fundamental importance in virulence and protective immunity in Mycobacterium tuberculosis. homologs have been detected in other Gram-positive bacterial species. It may represent a novel secretion system potentially driven by the pfam01580 domains in the YukA-like proteins.	1.50741e-11
NZ_AP022575.1|WP_083050560.1|4174236_4175505_+|hypothetical-protein	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.95942e-06
NZ_AP022575.1|WP_083050591.1|4168107_4168521_+|VOC-family-protein	gnl|CDD|319916	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins. Uncharacterized subfamily of VOC family contains human glyoxalase domain-containing protein 5 and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.40253e-20
NZ_AP022575.1|WP_083050583.1|4165854_4167045_-|LLM-class-flavin-dependent-oxidoreductase	gnl|CDD|225052	COG2141, COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion].	8.75369e-48
NZ_AP022575.1|WP_083050577.1|4168845_4171080_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl|CDD|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_AP022575.1|WP_083050554.1|4176509_4177445_+|pantoate--beta-alanine-ligase	gnl|CDD|234741	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed.	2.84114e-143
NZ_AP022575.1|WP_083051258.1|4161305_4162055_-|SIMPL-domain-containing-protein	gnl|CDD|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	4.76779e-61
NZ_AP022575.1|WP_083051253.1|4162882_4164124_+|PPE-family-protein	gnl|CDD|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	6.72811e-58
NZ_AP022575.1|WP_083050565.1|4173058_4173595_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl|CDD|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	1.10627e-49
NZ_AP022575.1|WP_083051255.1|4162569_4162869_+|PE-family-protein	gnl|CDD|376422	pfam00934, PE, PE family. This family named after a PE motif near to the amino terminus of the domain. The PE family of proteins all contain an amino-terminal region of about 110 amino acids. The carboxyl terminus of this family are variable and fall into several classes. The largest class of PE proteins is the highly repetitive PGRS class which have a high glycine content. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	2.13196e-15
NZ_AP022575.1|WP_083050568.1|4172535_4172934_+|dihydroneopterin-aldolase	gnl|CDD|224456	COG1539, FolB, Dihydroneopterin aldolase [Coenzyme metabolism].	3.75231e-45
NZ_AP022575.1|WP_158084784.1|4165597_4165765_-|hypothetical-protein	gnl|CDD|176223	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.87783e-05
NZ_AP022575.1|WP_083050557.1|4175601_4176513_+|DUF2520-domain-containing-protein	gnl|CDD|227782	COG5495, COG5495, Uncharacterized conserved protein [Function unknown].	1.74298e-103
NZ_AP022575.1|WP_083050562.1|4173594_4174071_+|DUF3180-domain-containing-protein	gnl|CDD|378650	pfam11377, DUF3180, Protein of unknown function (DUF3180). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	1.8869e-30
NZ_AP022575.1|WP_083051260.1|4160691_4161300_+|hypoxanthine-phosphoribosyltransferase	gnl|CDD|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	7.38023e-92
NZ_AP022575.1|WP_083052703.1|4164525_4164810_+|WXG100-family-type-VII-secretion-target	gnl|CDD|377587	pfam06013, WXG100, Proteins of 100 residues with WXG. ESAT-6 is a small protein appears to be of fundamental importance in virulence and protective immunity in Mycobacterium tuberculosis. homologs have been detected in other Gram-positive bacterial species. It may represent a novel secretion system potentially driven by the pfam01580 domains in the YukA-like proteins.	4.63423e-10
NZ_AP022575.1|WP_083050574.1|4171095_4171704_+|GTP-cyclohydrolase-I-FolE	gnl|CDD|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	4.38263e-115
NZ_AP022575.1|WP_083050580.1|4167041_4168010_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	4.00969e-31

Protein sequences

>NZ_AP022575.1|WP_083050591.1|4168107_4168521_+|VOC-family-protein
MRLDHVVLWTKDPQTAMDFYTRVIGLAPVRFDEFRAGEAPFPSVRVCADSIIDLMPAATAAGIEATTGVQGGAGHPLNHVCLAMSKAEYDALDRRLQAEGVDTSARLNQTYGARGWAPQGFYFVDPDGNVVEARYYE
>NZ_AP022575.1|WP_083050580.1|4167041_4168010_-|alpha/beta-hydrolase
MALPTERIVDTNGIRLRVTEAGDRGAPVVLLAHGFPELAYSWRHQVPALAEAGYHVLAPDQRGYGGSSRPDAIEAYNIHELTADLVGLLDDVGAEKAVWVGHDWGAVVAWSAPLLHPDRVAAVAAMSVPALPRAQVPPTQAFRKTFGENFFYILYFQQPGVADAELNGDPARTIRRMIGGLRPPADQGAALRMLAPGPEGFIDRLPEPDGLPAWITRDELDHYITEFTRTGFTGGLNWYRNFDRNWETTAELADATISVPCLFIAGTADPVLSFTRLDRASEVISGPYREVLIDGAGHWVQQERPDEVNATLLEFLAGLDLR
>NZ_AP022575.1|WP_083050583.1|4165854_4167045_-|LLM-class-flavin-dependent-oxidoreductase
MSAPMRFGVFITPFHPTGQSPTVALEYDMERVVALDRLGFDEAWFGEHHSGGYELIACPEVFIAAAAERTKHIRLGTGVVSLPYHHPLMVADRWVLLDHLTRGRVMFGTGPGALPSDAYMMGIDPIDQRRMMQEALEAILALFRAAPDERIDRHSDWFTLREAQLHIRPYTWPHPEISTAAMISPSGPRLAGALGTSLLSLSMSVPGGYAALENTWQVVCEQAAKAGRDEPDRANWRVLSIMHLSDSRDQAIDDCTYGLSDFAQYFGAAGFVPLANTVEGAQSRREFVEEYAAKGNCCIGTPDDAISHIEDLLDRSGGFGTLLLLGHDWASPRATFHSYDLFARKVIPYFKGQLAAPRASHEWAKGKRDRLIGRAGEAIAQAITEHVTEHEGAAGS
>NZ_AP022575.1|WP_158084784.1|4165597_4165765_-|hypothetical-protein
MNTALCALADDDIVVAPMITGEARLDGVVAAVENLAVPERHCTVAVTPLSFSGLI
>NZ_AP022575.1|WP_083052703.1|4164525_4164810_+|WXG100-family-type-VII-secretion-target
MTINYQFGDVDAHGATIRAQAASLEAEHQAIVRDVLAAGDFWGGAGSVACQEFITQLGRNFQVIYEQANAHGQKIQTAGSNMAQTDSAVGSSWA
>NZ_AP022575.1|WP_163662691.1|4164190_4164487_+|type-VII-secretion-system-ESX-5-protein-EsxJ
MATRFMTDPHAMRDMAGRFEVHAQTVEDEARRMWASAQNISGAGWSGLAEATSLDTMTQMNQAFRNIVNMLHGVRDGLIRDANNYEQQEQASQQILSS
>NZ_AP022575.1|WP_083051253.1|4162882_4164124_+|PPE-family-protein
MVDFAMLPPEINSTLMYSGPGSGPMLMAAAAWEALAAELQSTASNYEALITALTDGPWQGPSAASMVAAATPQVAWLRSTAAQAEQAGSQAVAAAAAYEAAFVATVPPAEVAANRALLMALLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLTPFSPAAETINPAGLAAQANAITQALNSAANSLGLQQIPRTLSQLAGITNEPPWLTNLAGALGLTGHTWTSDGSGIVVAGALGDVVEGLTGSATVDGSLAMDVFNRWVSPARLMVTQMKDYFGLAHDLPKWAQEGVKEAASAAKEAAKDLPSVIPKAGLGGIAGAVGQAAKVGGLAVPASWAGTAPSTPAVMAASNSLGAAAAAEGATHAFGGVPVMPGAGVGRGVANFAAPRYGFKPTVIAFPPSGG
>NZ_AP022575.1|WP_083051255.1|4162569_4162869_+|PE-family-protein
MSIMLAEPEMLAATAGELQSINVALRAGNAAAAIPTTGVVPAAADLVSLLTATQFVTHAQLYQQISAQAAAVQEQLATTLGISAGSYAATEAANATTIS
>NZ_AP022575.1|WP_083051258.1|4161305_4162055_-|SIMPL-domain-containing-protein
MSNVKTPGPARTAAAAALAGLAGLTAATLSGCDSHGSASPGPNPRQVTVFGTGQVRGVPDTLTADLGIEFTAPDATSAMTQTNDRQQAVINALVGAGLDRADIRTTEVSLQPEYRRAEPSGPATITGYRADNALEVKIHPTDAASRLLDLIVSTGGDATRIASVHYSIADDSQLVKDARARAFEDAKTRAQQYAQLSGLKLGKVLSISEAAGYPPPEGGPAGPPRAAAVPLEPGQQTVSFSVTVIWQLD
>NZ_AP022575.1|WP_083051260.1|4160691_4161300_+|hypoxanthine-phosphoribosyltransferase
MVVAQSSAATTPGEAAELYPGDIKSVLLTKEQIQVRIAELGEQIGNDYRDVVAAGGQDLLLITVLKGAVLFVTDLARAIPLPTQFEFMAVSSYGTSSSSSGVVRILKDLDRDIHDRDVLIVEDVVDSGLTLSWLLRNLSSRHPRSLRVCTLLRKPDALGANVDIAYVGFDIPNDFVVGYGLDYDERYRDLPYIGTLDPRVYQ
>NZ_AP022575.1|WP_083050577.1|4168845_4171080_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MNRKNVIRTVTAIAVVVLLGWSFFYFSDDTRGYKPVDTSVAMAQINSDNVKSAQIDDREQQLRLTLKKGNNDTDGSDKVITKYPTGYAVDLFNALTAKNAKVSTVVNQGSILGELLIYVLPLLLLVGLFVMFSRMQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPGRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFDPRGGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHAKGKPMAPDADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRVISEQEKKITAYHEGGHTLAAWAMPDIDPVYKVTILARGRTGGHAVAVPEEDKGLRTRSEMISQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGTEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEAIFADVEKRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVAEPAFKAAIARATQAAEDEASRTSHGANGSHAGSRAPTQPDYGAPADWHAPGWPPQPSNRPSYSGQAYVPYPPPDQPDNDDSSGQREDVSRSNPPAHG
>NZ_AP022575.1|WP_083050574.1|4171095_4171704_+|GTP-cyclohydrolase-I-FolE
MSQLDSRIEHARVRVFDQRRAEAAVRELLYAVGEDPDRDGLRETPARVARAYREIFAGLYTDPDTVLNTMFDEEHDELVLVKAIPLYSTCEHHLVSFHGVAHVGYIPNHDGRVTGLSKIARLVDLYAKRPQVQERLTSQIADALVKKLDPRGVIVVIEAEHLCMAMRGVRKPGAITTTSAVRGQFKTSAASRAEALDLILRK
>NZ_AP022575.1|WP_142272137.1|4171700_4172543_+|dihydropteroate-synthase
MSPAPMRVMGVVNVTEDSFSDGGRYLDAGDAVEHGLALAADGADIIDVGGESTRPGAVRVDPRIESARVIPVVKELAAQGITVSIDTMHADVARGALENGARIVNDVSGGRCDPAMAPLVAEAGVRWVLMHWRPVSAGRPHQVPDYRDVVAEVRADLLASVADAVAAGVDPANLVIDPGLGFAKTGQHNWALLHALPELVATGFPVLLGASRKRFLGALLAGPDGVLRPPGGRETATAVITAMAALHGAWGVRVHDVRASVDALKVVDAWQRTERTGPDG
>NZ_AP022575.1|WP_083050568.1|4172535_4172934_+|dihydroneopterin-aldolase
MADRIELRGLTVHGYHGVYDHERVGGQRFVVDITLWIDLADAAASDDLADTFDYVRLAARAAEIVAGPPRNLIETVGAEIADHVMADERVHAVEVVVHKPQAPIRQTFTDVAVVTRRSRRGGRGSVMPAGEV
>NZ_AP022575.1|WP_083050565.1|4173058_4173595_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MTSVVLSIGSNLGDRLASLRSVVVGLGGTVRAVSPVYETDPWGGVRQGPFLNAVLIADDPARDAAAWLRRAQALERAAGRVRDRRWGPRTLDVDLITCHRTGPGGPAEVICRSSSLTLPHPRAHRRAFVLVPWLDVDPGAELTVADRVWPVAKLLAELEPADRDCVRRFPRTLDPEPG
>NZ_AP022575.1|WP_083050562.1|4173594_4174071_+|DUF3180-domain-containing-protein
MGPTRKRDLTAAVIAAAVVGYLLVGGLYRWFPPITVWTGLSLLAVAIAEALWARYVRAKINDGEIGDGPGWLHPLAVARSVMVAKASAWVGALVLGWWLGVLVYFLPRLSWQRAVAEDVTGAVVAAVSALALVVAALWLQHCCKSPQDPTERGEGVET
>NZ_AP022575.1|WP_083050560.1|4174236_4175505_+|hypothetical-protein
MTVLSRGARVRRGGRRPGWVLLTTLLVLAIGASCGLVFTSRVELLRLAVILALWAAVAGAFVSMLYRRQAEVEQARARDLKLVYDLQLDREISARREYELTVESQLRRELASELRAAAADEVAALRAELAALRTSLEILFDTDLQHRPALEPWEKERDAARVLADRAHDVAHSDALGRPRSRETPPADWVSSDRVTVVPRRAASRADDTSIIDVPEVGVPPGGGGPLASPRQPTPAGEQRRSSYDASPPSEPARVPRHRPPEPERSGWPPEAADGKWLPPGTPGSHWASDDVASEPTAQPSSRRRRARHASPEDRDDGPLGPVEPHYGGRRSRSRHSAEYLDHGVAGLRDSLGGSAGGAPGEHSPPPRLAPPPPPEPAPRHRSAEEGSHGLDRQGGGQTVADLMARLQVEPTGGGRRRRRGG
>NZ_AP022575.1|WP_083050557.1|4175601_4176513_+|DUF2520-domain-containing-protein
MVRFDGLRPARLKVGIISAGRVGTALGVALERADHVVVACSAISDASRRRARRRLPDTPVLPPPDVVAAAELLLLAVTDGELAGLVSGLAATAAVPPGTIVAHTSGVNGIGILAPLTQLGCIPLAIHPAMTFTGSDDDIGRLADTCFGITAADDVGHAIAQSLVLEMGGEPFAVREEARLLYHAALAHGSNHLVTVLADAVEALRAALRGQELLGQQHVDDQPGGIVERIVGPLARAALENTLRRGQAALTGPVARGDAAAVAGHLAALTAVDPQLGQAYRVNALRTAQRAHAPDDVVEVLTS
>NZ_AP022575.1|WP_083050554.1|4176509_4177445_+|pantoate--beta-alanine-ligase
MSARAPVFHPGELNVYAAPGDVTDVCRALRHTGRRVMLVPTMGALHDGHLALVGAAKRVPGSVVVVSIFVNPLQFGAGEDLDAYPRTLDDDLARLRGEGVEIVFTPTAAAMYPNGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDAAFFGEKDYQQLVLIRQMVADLNVDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAAALSASLTAAARAAPAGARAALDAAAAVLDAVPGLAVDYLQLRDADLGPLNGGGSGRLLVAARLGATRLLDNIAIEIGTFAGTDGPDEHRATVESQWRN
>NZ_AP022575.1|WP_083050551.1|4177444_4177888_+|aspartate-1-decarboxylase
MLRTMLKSKIHRATVTQADLHYVGSVTIDADLMDAADLLEGEQVTIVDIDNGARLVTYAITGERGSGVIGINGAAAHLVHPGDLVILLAYATMEDTEARRYRPRIVFVDADNKQIDLGHDPAFVPADAGSLCPARGWYPHDPRIGVR

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	598377-598397	0	1.0
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	916453-916473	0	1.0
NZ_AP022575_4	4.7|319247|15|NZ_AP022575|CRISPRCasFinder	319247-319261	15	NZ_AP022575.1	403705-403719	0	1.0
NZ_AP022575_4	4.7|319247|15|NZ_AP022575|CRISPRCasFinder	319247-319261	15	NZ_AP022575.1	404140-404154	0	1.0
NZ_AP022575_5	5.1|413348|23|NZ_AP022575|CRT	413348-413370	23	NZ_AP022575.1	411812-411834	0	1.0
NZ_AP022575_5	5.1|413348|23|NZ_AP022575|CRT	413348-413370	23	NZ_AP022575.1	411869-411891	0	1.0
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	NZ_AP022575.1	411839-411864	0	1.0
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	NZ_AP022575.1	411881-411906	0	1.0
NZ_AP022575_5	5.4|413492|38|NZ_AP022575|CRT	413492-413529	38	NZ_AP022575.1	411884-411921	0	1.0
NZ_AP022575_6	6.3|1035267|20|NZ_AP022575|CRISPRCasFinder	1035267-1035286	20	NZ_AP022575.1	4484031-4484050	0	1.0
NZ_AP022575_13	13.1|3421529|33|NZ_AP022575|CRISPRCasFinder	3421529-3421561	33	NZ_AP022575.1	1662788-1662820	0	1.0
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	559255-559275	1	0.952
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	559303-559323	1	0.952
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	559882-559902	1	0.952
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	3049942-3049962	1	0.952
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	4294799-4294819	1	0.952
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	4295435-4295455	1	0.952
NZ_AP022575_4	4.9|319338|18|NZ_AP022575|CRISPRCasFinder	319338-319355	18	NZ_AP022575.1	2589002-2589019	1	0.944
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	15018-15038	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	15327-15347	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	1522137-1522157	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	1522209-1522229	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	1963653-1963673	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2056624-2056644	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2100940-2100960	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2178303-2178323	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2404800-2404820	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2405394-2405414	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2799491-2799511	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2801487-2801507	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2885384-2885404	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2885837-2885857	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	3143679-3143699	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	4501373-4501393	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	3657-3677	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	63313-63333	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	916357-916377	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	916525-916545	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	1584842-1584862	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2189184-2189204	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2222883-2222903	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2588060-2588080	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2851542-2851562	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	2856089-2856109	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	3049567-3049587	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	4296623-4296643	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	4490866-4490886	2	0.905
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_AP022575.1	4492736-4492756	2	0.905
NZ_AP022575_4	4.4|319083|21|NZ_AP022575|CRISPRCasFinder	319083-319103	21	NZ_AP022575.1	325671-325691	2	0.905
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	NZ_AP022575.1	2288853-2288873	2	0.905
NZ_AP022575_6	6.3|1035267|20|NZ_AP022575|CRISPRCasFinder	1035267-1035286	20	NZ_AP022575.1	2002-2021	2	0.9
NZ_AP022575_6	6.3|1035267|20|NZ_AP022575|CRISPRCasFinder	1035267-1035286	20	NZ_AP022575.1	1829617-1829636	2	0.9
NZ_AP022575_6	6.3|1035267|20|NZ_AP022575|CRISPRCasFinder	1035267-1035286	20	NZ_AP022575.1	4488240-4488259	2	0.9
NZ_AP022575_6	6.3|1035267|20|NZ_AP022575|CRISPRCasFinder	1035267-1035286	20	NZ_AP022575.1	66737-66756	2	0.9
NZ_AP022575_6	6.3|1035267|20|NZ_AP022575|CRISPRCasFinder	1035267-1035286	20	NZ_AP022575.1	378953-378972	2	0.9
NZ_AP022575_6	6.3|1035267|20|NZ_AP022575|CRISPRCasFinder	1035267-1035286	20	NZ_AP022575.1	2612749-2612768	2	0.9
NZ_AP022575_6	6.5|1035357|23|NZ_AP022575|CRISPRCasFinder	1035357-1035379	23	NZ_AP022575.1	3409722-3409744	2	0.913
NZ_AP022575_6	6.11|1035714|20|NZ_AP022575|CRISPRCasFinder	1035714-1035733	20	NZ_AP022575.1	67121-67140	2	0.9
NZ_AP022575_6	6.11|1035714|20|NZ_AP022575|CRISPRCasFinder	1035714-1035733	20	NZ_AP022575.1	3354151-3354170	2	0.9
NZ_AP022575_6	6.11|1035714|20|NZ_AP022575|CRISPRCasFinder	1035714-1035733	20	NZ_AP022575.1	1829287-1829306	2	0.9
NZ_AP022575_6	6.11|1035714|20|NZ_AP022575|CRISPRCasFinder	1035714-1035733	20	NZ_AP022575.1	1832471-1832490	2	0.9
NZ_AP022575_6	6.11|1035714|20|NZ_AP022575|CRISPRCasFinder	1035714-1035733	20	NZ_AP022575.1	3406614-3406633	2	0.9
NZ_AP022575_6	6.11|1035714|20|NZ_AP022575|CRISPRCasFinder	1035714-1035733	20	NZ_AP022575.1	3409386-3409405	2	0.9
NZ_AP022575_6	6.11|1035714|20|NZ_AP022575|CRISPRCasFinder	1035714-1035733	20	NZ_AP022575.1	4484913-4484932	2	0.9

1. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 598377-598397, mismatch: 0, identity: 1.0

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggccggcggcacc	Protospacer
*********************

2. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 916453-916473, mismatch: 0, identity: 1.0

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggccggcggcacc	Protospacer
*********************

3. spacer 4.7|319247|15|NZ_AP022575|CRISPRCasFinder matches to position: 403705-403719, mismatch: 0, identity: 1.0

ctgctggtgggcacc	CRISPR spacer
ctgctggtgggcacc	Protospacer
***************

4. spacer 4.7|319247|15|NZ_AP022575|CRISPRCasFinder matches to position: 404140-404154, mismatch: 0, identity: 1.0

ctgctggtgggcacc	CRISPR spacer
ctgctggtgggcacc	Protospacer
***************

5. spacer 5.1|413348|23|NZ_AP022575|CRT matches to position: 411812-411834, mismatch: 0, identity: 1.0

cggtaccagcggcggtgacacca	CRISPR spacer
cggtaccagcggcggtgacacca	Protospacer
***********************

6. spacer 5.1|413348|23|NZ_AP022575|CRT matches to position: 411869-411891, mismatch: 0, identity: 1.0

cggtaccagcggcggtgacacca	CRISPR spacer
cggtaccagcggcggtgacacca	Protospacer
***********************

7. spacer 5.3|413447|26|NZ_AP022575|CRT matches to position: 411839-411864, mismatch: 0, identity: 1.0

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacaccagcggcggtgacactg	Protospacer
**************************

8. spacer 5.3|413447|26|NZ_AP022575|CRT matches to position: 411881-411906, mismatch: 0, identity: 1.0

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacaccagcggcggtgacactg	Protospacer
**************************

9. spacer 5.4|413492|38|NZ_AP022575|CRT matches to position: 411884-411921, mismatch: 0, identity: 1.0

tgacaccagcggcggtgacactggcggcggtgacacca	CRISPR spacer
tgacaccagcggcggtgacactggcggcggtgacacca	Protospacer
**************************************

10. spacer 6.3|1035267|20|NZ_AP022575|CRISPRCasFinder matches to position: 4484031-4484050, mismatch: 0, identity: 1.0

gtaattgccggtgttgccga	CRISPR spacer
gtaattgccggtgttgccga	Protospacer
********************

11. spacer 13.1|3421529|33|NZ_AP022575|CRISPRCasFinder matches to position: 1662788-1662820, mismatch: 0, identity: 1.0

ggcaaggcggtcgtcgtcttccgaacccccgac	CRISPR spacer
ggcaaggcggtcgtcgtcttccgaacccccgac	Protospacer
*********************************

12. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 559255-559275, mismatch: 1, identity: 0.952

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggccggcgggacc	Protospacer
***************** ***

13. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 559303-559323, mismatch: 1, identity: 0.952

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggccggcggcgcc	Protospacer
******************.**

14. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 559882-559902, mismatch: 1, identity: 0.952

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggccggcggcgcc	Protospacer
******************.**

15. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 3049942-3049962, mismatch: 1, identity: 0.952

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgccggcggcacc	Protospacer
******** ************

16. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 4294799-4294819, mismatch: 1, identity: 0.952

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggccggcggcgcc	Protospacer
******************.**

17. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 4295435-4295455, mismatch: 1, identity: 0.952

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggccggcggcgcc	Protospacer
******************.**

18. spacer 4.9|319338|18|NZ_AP022575|CRISPRCasFinder matches to position: 2589002-2589019, mismatch: 1, identity: 0.944

gccggcgccggcggccgt	CRISPR spacer
gccggcgccggcggcagt	Protospacer
*************** **

19. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 15018-15038, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aatggcggggccggcggaacc	Protospacer
**.************** ***

20. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 15327-15347, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgccggcggcgcc	Protospacer
******** *********.**

21. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 1522137-1522157, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggcgggcggctcc	Protospacer
*********** ****** **

22. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 1522209-1522229, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggccgggggcgcc	Protospacer
************** ***.**

23. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 1963653-1963673, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgccggcggcgcc	Protospacer
******** *********.**

24. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2056624-2056644, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcgggaccggcgggacc	Protospacer
*********.******* ***

25. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2100940-2100960, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcaccggcggcacc	Protospacer
******** .***********

26. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2178303-2178323, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcgggaccgggggcacc	Protospacer
*********.**** ******

27. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2404800-2404820, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgccggcggcgcc	Protospacer
******** *********.**

28. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2405394-2405414, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggccggtggcgcc	Protospacer
**************.***.**

29. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2799491-2799511, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggacggcggaacc	Protospacer
********** ****** ***

30. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2801487-2801507, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcgggcccggcgggacc	Protospacer
********* ******* ***

31. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2885384-2885404, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggtgccggcggcgcc	Protospacer
******** *********.**

32. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2885837-2885857, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgccggcggcgcc	Protospacer
******** *********.**

33. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 3143679-3143699, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggtcggcggcgcc	Protospacer
**********.*******.**

34. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 4501373-4501393, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aatggcggggccggcggaacc	Protospacer
**.************** ***

35. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 3657-3677, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgccggcggcgcc	Protospacer
******** *********.**

36. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 63313-63333, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgccggcggctcc	Protospacer
******** ********* **

37. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 916357-916377, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggacggcggaacc	Protospacer
********** ****** ***

38. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 916525-916545, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aatggcggcgccggcggcacc	Protospacer
**.***** ************

39. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 1584842-1584862, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgccggcggcgcc	Protospacer
******** *********.**

40. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2189184-2189204, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggagccggcggtacc	Protospacer
********.********.***

41. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2222883-2222903, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggagcgggcggcacc	Protospacer
********.** *********

42. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2588060-2588080, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggagccggcggtacc	Protospacer
********.********.***

43. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2851542-2851562, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aagggcggtgccggcggcacc	Protospacer
** ***** ************

44. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 2856089-2856109, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgccggcggcgcc	Protospacer
******** *********.**

45. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 3049567-3049587, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggcgacggcggcacc	Protospacer
******** * **********

46. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 4296623-4296643, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aagggcggggccggcggcgcc	Protospacer
** ***************.**

47. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 4490866-4490886, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggcggggcgggcggcgcc	Protospacer
*********** ******.**

48. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to position: 4492736-4492756, mismatch: 2, identity: 0.905

aacggcggggccggcggcacc	CRISPR spacer
aacggtggggccggcggtacc	Protospacer
*****.***********.***

49. spacer 4.4|319083|21|NZ_AP022575|CRISPRCasFinder matches to position: 325671-325691, mismatch: 2, identity: 0.905

ctgtggggcgtcggcggcacc	CRISPR spacer
ctgtggggcgccggcggcgcc	Protospacer
**********.*******.**

50. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to position: 2288853-2288873, mismatch: 2, identity: 0.905

cgtggcggcacgggcggcgcc	CRISPR spacer
cgtggcggcccgggtggcgcc	Protospacer
********* ****.******

51. spacer 6.3|1035267|20|NZ_AP022575|CRISPRCasFinder matches to position: 2002-2021, mismatch: 2, identity: 0.9

gtaattgccggtgttgccga	CRISPR spacer
gtagttgccggagttgccga	Protospacer
***.******* ********

52. spacer 6.3|1035267|20|NZ_AP022575|CRISPRCasFinder matches to position: 1829617-1829636, mismatch: 2, identity: 0.9

gtaattgccggtgttgccga	CRISPR spacer
gttattgccagtgttgccga	Protospacer
** ******.**********

53. spacer 6.3|1035267|20|NZ_AP022575|CRISPRCasFinder matches to position: 4488240-4488259, mismatch: 2, identity: 0.9

gtaattgccggtgttgccga	CRISPR spacer
gtagttgccggagttgccga	Protospacer
***.******* ********

54. spacer 6.3|1035267|20|NZ_AP022575|CRISPRCasFinder matches to position: 66737-66756, mismatch: 2, identity: 0.9

gtaattgccggtgttgccga	CRISPR spacer
gtagttgccggcgttgccga	Protospacer
***.*******.********

55. spacer 6.3|1035267|20|NZ_AP022575|CRISPRCasFinder matches to position: 378953-378972, mismatch: 2, identity: 0.9

gtaattgccggtgttgccga	CRISPR spacer
gtagttgccgatgttgccga	Protospacer
***.******.*********

56. spacer 6.3|1035267|20|NZ_AP022575|CRISPRCasFinder matches to position: 2612749-2612768, mismatch: 2, identity: 0.9

gtaattgccggtgttgccga	CRISPR spacer
gttattgccggtgttcccga	Protospacer
** ************ ****

57. spacer 6.5|1035357|23|NZ_AP022575|CRISPRCasFinder matches to position: 3409722-3409744, mismatch: 2, identity: 0.913

gtagctggtgcccgagtttccga	CRISPR spacer
gttgccggtgcccgagtttccga	Protospacer
** **.*****************

58. spacer 6.11|1035714|20|NZ_AP022575|CRISPRCasFinder matches to position: 67121-67140, mismatch: 2, identity: 0.9

gaagctgccgaggtttccgc	CRISPR spacer
gacgctgccgatgtttccgc	Protospacer
** ******** ********

59. spacer 6.11|1035714|20|NZ_AP022575|CRISPRCasFinder matches to position: 3354151-3354170, mismatch: 2, identity: 0.9

gaagctgccgaggtttccgc	CRISPR spacer
gaagctgccgatgttgccgc	Protospacer
*********** *** ****

60. spacer 6.11|1035714|20|NZ_AP022575|CRISPRCasFinder matches to position: 1829287-1829306, mismatch: 2, identity: 0.9

gaagctgccgaggtttccgc	CRISPR spacer
gaagctgccgatgttgccgc	Protospacer
*********** *** ****

61. spacer 6.11|1035714|20|NZ_AP022575|CRISPRCasFinder matches to position: 1832471-1832490, mismatch: 2, identity: 0.9

gaagctgccgaggtttccgc	CRISPR spacer
gaagttgccgagatttccgc	Protospacer
****.*******.*******

62. spacer 6.11|1035714|20|NZ_AP022575|CRISPRCasFinder matches to position: 3406614-3406633, mismatch: 2, identity: 0.9

gaagctgccgaggtttccgc	CRISPR spacer
gaagctgccgacgttgccgc	Protospacer
*********** *** ****

63. spacer 6.11|1035714|20|NZ_AP022575|CRISPRCasFinder matches to position: 3409386-3409405, mismatch: 2, identity: 0.9

gaagctgccgaggtttccgc	CRISPR spacer
gaagctgccgacgttgccgc	Protospacer
*********** *** ****

64. spacer 6.11|1035714|20|NZ_AP022575|CRISPRCasFinder matches to position: 4484913-4484932, mismatch: 2, identity: 0.9

gaagctgccgaggtttccgc	CRISPR spacer
gaagctgccgtcgtttccgc	Protospacer
**********  ********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP022575_4	4.3|319038|21|NZ_AP022575|CRISPRCasFinder	319038-319058	21	NZ_LR134467	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 25, complete sequence	55873-55893	1	0.952
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	NZ_CP006989	Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence	250794-250814	1	0.952
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	43463-43483	1	0.952
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	234017-234037	1	0.952
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	139620-139640	1	0.952
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	NZ_CP021126	Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence	270625-270645	1	0.952
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	193129-193149	1	0.952
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	279823-279843	1	0.952
NZ_AP022575_10	10.6|2852973|20|NZ_AP022575|CRT	2852973-2852992	20	NZ_CP016462	Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence	132369-132388	1	0.95
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP053906	Hymenobacter sp. BRD67 plasmid unnamed2, complete sequence	19523-19546	2	0.917
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	3712-3735	2	0.917
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MH001451	Mycobacterium phage Nairb, complete genome	21248-21271	2	0.917
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MF155936	Mycobacterium phage ZenTime222, complete genome	21248-21271	2	0.917
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MK494089	Mycobacterium phage Ibrahim, complete genome	21248-21271	2	0.917
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NC_024135	Mycobacterium phage Bernal13, complete genome	21248-21271	2	0.917
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	KM591905	Mycobacterium phage RonRayGun, complete genome	21248-21271	2	0.917
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MN735432	Mycobacteriophage Whitty, complete genome	21248-21271	2	0.917
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	350114-350137	2	0.917
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	MN694642	Marine virus AFVG_250M1139, complete genome	23660-23680	2	0.905
NZ_AP022575_4	4.6|319202|21|NZ_AP022575|CRISPRCasFinder	319202-319222	21	MN694309	Marine virus AFVG_250M1141, complete genome	17443-17463	2	0.905
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MH697579	Mycobacterium phage Cane17, complete genome	6603-6628	2	0.923
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MG812493	Mycobacterium phage NuevoMundo, complete genome	9607-9632	2	0.923
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MK359346	Mycobacterium phage NoodleTree, complete genome	7499-7524	2	0.923
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MG812494	Mycobacterium phage Pier, complete genome	8170-8195	2	0.923
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MK450422	Mycobacterium phage RoMag, complete genome	7249-7274	2	0.923
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MK450422	Mycobacterium phage RoMag, complete genome	7264-7289	2	0.923
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	608346-608371	2	0.923
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1362126-1362148	2	0.913
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	3703-3726	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2133221-2133244	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_LR134446	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 4, complete sequence	52101-52124	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	571766-571789	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	350105-350128	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	350666-350689	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2211456-2211479	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3466484-3466507	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	933606-933629	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MK524490	Mycobacterium phage Donny, complete genome	33817-33840	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MT939492	Xanthomonas phage Xoo-sp14, complete genome	88798-88821	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	JN699007	Mycobacterium phage Acadian, complete genome	33812-33835	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	GQ303260	Mycobacterium phage ET08, complete genome	79434-79457	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MT889381	Mycobacterium phage Suigeneris, complete genome	33817-33840	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NC_028986	Mycobacterium phage Alice, complete sequence	79749-79772	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	682585-682608	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	138405-138428	3	0.875
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	380978-381001	3	0.875
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MN945901	Mycobacterium phage Ximenita, complete genome	39384-39409	3	0.885
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MK359359	Mycobacterium phage Colt, complete genome	6609-6634	3	0.885
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NC_019958	Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence	151581-151606	3	0.885
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	850233-850255	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1661499-1661521	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1952845-1952867	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	1674468-1674490	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	9734-9756	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	917613-917635	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	99446-99468	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	895520-895542	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	552716-552738	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	17461-17483	3	0.87
NZ_AP022575_10	10.7|2853018|23|NZ_AP022575|CRT	2853018-2853040	23	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	175485-175507	3	0.87
NZ_AP022575_10	10.11|2853210|26|NZ_AP022575|CRT	2853210-2853235	26	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	100815-100840	3	0.885
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	3721-3744	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	350096-350119	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MK814754	Mycobacterium phage Sumter, complete genome	28147-28170	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MK814754	Mycobacterium phage Sumter, complete genome	28645-28668	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MN369739	Mycobacterium phage Kenuha5, complete genome	22594-22617	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MK967397	Mycobacterium phage Mahavrat, complete genome	24820-24843	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MT522000	Mycobacterium phage Soul22, complete genome	22198-22221	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	KY348865	Mycobacterium phage Bubbles123, complete genome	25546-25569	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MN428047	Mycobacterium phage Doomphist, complete genome	24968-24991	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MF919502	Mycobacterium phage Demsculpinboyz, complete genome	22196-22219	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	AY129336	Mycobacteriophage Che9d, complete genome	22211-22234	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MT771340	Mycobacterium phage Jorgensen, complete genome	28482-28505	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MK359343	Mycobacterium phage Pollywog, complete genome	23661-23684	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NC_042030	Mycobacterium phage Yoshi, complete sequence	22199-22222	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NC_048729	Mycobacterium phage Renaud18, complete genome	22871-22894	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MK937593	Mycobacterium phage Flypotenuse, complete genome	26860-26883	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MT889380	Mycobacterium phage Coco12, complete genome	22842-22865	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NC_026585	Mycobacteriophage Estave1, complete genome	22564-22587	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MK305886	Mycobacterium phage Poenanya, complete genome	24968-24991	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	JN859129	Mycobacterium virus DotProduct, complete genome	24835-24858	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	KC736071	Mycobacterium phage WIVsmall, complete genome	29687-29710	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MG925354	Mycobacterium phage Ogopogo, complete genome	22791-22814	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NC_023698	Mycobacterium phage Avani, complete genome	22203-22226	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MH536820	Mycobacterium phage Glexan, complete genome	26860-26883	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NC_011054	Mycobacterium phage Boomer, complete genome	24643-24666	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MT114167	Mycobacterium phage Phanphagia, complete genome	22497-22520	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	MH077585	Mycobacterium phage TChen, complete genome	22976-22999	4	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NC_048788	Mycobacterium phage ThetaBob, complete genome	22789-22812	4	0.833
NZ_AP022575_2	2.1|64986|26|NZ_AP022575|PILER-CR	64986-65011	26	NZ_LT703506	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 2	261054-261079	4	0.846
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	416700-416727	4	0.857
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP038031	Rhodococcus ruber strain R1 plasmid unnamed1, complete sequence	161007-161034	4	0.857
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	NC_019958	Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence	141062-141087	4	0.846
NZ_AP022575_5	5.4|413492|38|NZ_AP022575|CRT	413492-413529	38	MK450422	Mycobacterium phage RoMag, complete genome	7252-7289	4	0.895
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP010611	Phaeobacter inhibens strain P92 plasmid pP92_a, complete sequence	27779-27804	4	0.846
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP010716	Phaeobacter piscinae strain P18 plasmid pP18_a, complete sequence	27779-27804	4	0.846
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP010662	Phaeobacter inhibens strain P74 plasmid pP74_a, complete sequence	27779-27804	4	0.846
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NC_015065	Granulicella tundricola MP5ACTX9 plasmid pACIX902, complete sequence	79980-80005	4	0.846
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP012988	Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence	127588-127613	4	0.846
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP045676	Klebsiella pneumoniae strain WSD411 plasmid pWSD411_3, complete sequence	48355-48380	4	0.846
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP012993	Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence	127588-127613	4	0.846
NZ_AP022575_10	10.2|2852727|26|NZ_AP022575|CRT	2852727-2852752	26	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	734344-734369	4	0.846
NZ_AP022575_10	10.2|2852727|26|NZ_AP022575|CRT	2852727-2852752	26	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	355123-355148	4	0.846
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	146689-146714	4	0.846
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	213839-213864	4	0.846
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	MG732930	Enterobacter phage Ec_L1, complete genome	31547-31572	4	0.846
NZ_AP022575_10	10.11|2853210|26|NZ_AP022575|CRT	2853210-2853235	26	NC_012855	Ralstonia pickettii 12D plasmid pRp12D01, complete sequence	228415-228440	4	0.846
NZ_AP022575_10	10.11|2853210|26|NZ_AP022575|CRT	2853210-2853235	26	NZ_CP007256	Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence	29377-29402	4	0.846
NZ_AP022575_10	10.11|2853210|26|NZ_AP022575|CRT	2853210-2853235	26	NZ_CP047175	Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence	77754-77779	4	0.846
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NZ_CP016500	Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence	285868-285897	5	0.833
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NZ_CP045856	Agrobacterium sp. MA01 plasmid punanmed2, complete sequence	18414-18443	5	0.833
NZ_AP022575_1	1.8|64453|24|NZ_AP022575|CRT	64453-64476	24	NZ_CP012183	Pseudonocardia sp. EC080610-09 plasmid pBCI2-2, complete sequence	49344-49367	5	0.792
NZ_AP022575_2	2.1|64986|26|NZ_AP022575|PILER-CR	64986-65011	26	MH779514	Mycobacterium phage Paito, complete genome	828-853	5	0.808
NZ_AP022575_2	2.1|64986|26|NZ_AP022575|PILER-CR	64986-65011	26	NZ_CP022209	Burkholderia gladioli pv. gladioli strain FDAARGOS_188 plasmid unnamed1, complete sequence	10260-10285	5	0.808
NZ_AP022575_2	2.1|64986|26|NZ_AP022575|PILER-CR	64986-65011	26	NZ_CP009321	Burkholderia gladioli strain ATCC 10248 plasmid 1, complete sequence	116154-116179	5	0.808
NZ_AP022575_2	2.1|64986|26|NZ_AP022575|PILER-CR	64986-65011	26	NZ_CP022007	Burkholderia gladioli pv. gladioli strain KACC 11889 plasmid pls1, complete sequence	43530-43555	5	0.808
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	380283-380310	5	0.821
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1140629-1140656	5	0.821
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	297169-297196	5	0.821
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1145309-1145336	5	0.821
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	684876-684903	5	0.821
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	310268-310295	5	0.821
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_LN832560	Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence	75161-75188	5	0.821
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP047145	Streptomyces sp. HF10 plasmid plas1, complete sequence	21149-21176	5	0.821
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	NC_012858	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence	424329-424354	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	NC_008384	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence	135224-135249	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MG812490	Mycobacterium phage Holeinone, complete genome	27345-27370	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MN428049	Mycobacterium phage West99, complete genome	27480-27505	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MN586045	Mycobacterium phage Brownie5, complete genome	27486-27511	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MH001452	Mycobacterium phage Kheth, complete genome	27365-27390	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MH697584	Mycobacterium phage FrenchFry, complete genome	27483-27508	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MN813678	Mycobacterium phage Lephleur, complete genome	27363-27388	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MG757162	Mycobacterium phage Opia, complete genome	27353-27378	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	KT365402	Mycobacterium phage Tres, complete genome	27360-27385	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	KM101117	Mycobacterium phage LizLemon, complete genome	27479-27504	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	JN698991	Mycobacterium phage Hedgerow, complete genome	27465-27490	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	NC_043767	Mycobacterium virus TA17a, complete genome	27347-27372	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MN586046	Mycobacterium phage Tinciduntsolum, complete genome	27485-27510	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MT639652	Mycobacterium phage MasterPo, complete genome	27366-27391	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MK620898	Mycobacterium phage Coffee, complete genome	27469-27494	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	JN699004	Mycobacterium phage Ares, complete genome	27363-27388	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MG812491	Mycobacterium phage ItsyBitsy1, complete genome	27347-27372	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MN234225	Mycobacterium phage Rhinoforte, complete genome	27473-27498	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	DQ398048	Mycobacterium phage Qyrzula, complete genome	27448-27473	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	KR997932	Mycobacterium phage Godines, complete genome	27363-27388	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	AY129334	Mycobacterium phage Rosebush, complete genome	27480-27505	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MH590591	Mycobacterium phage Sabella, complete genome	27357-27382	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	JN618996	Mycobacterium phage Arbiter, complete genome	27441-27466	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	KX443696	Mycobacterium phage Laurie, complete genome	27354-27379	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MH727546	Mycobacterium phage Eaglehorse, complete genome	27393-27418	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	MK061411	Mycobacterium phage Faze9, complete genome	27489-27514	5	0.808
NZ_AP022575_5	5.3|413447|26|NZ_AP022575|CRT	413447-413472	26	KT880194	Mycobacterium phage Glass, complete genome	27483-27508	5	0.808
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	323151-323176	5	0.808
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP013515	Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence	122178-122203	5	0.808
NZ_AP022575_10	10.1|2852676|26|NZ_AP022575|CRT	2852676-2852701	26	NZ_CP013605	Rhizobium sp. N731 plasmid pRspN731d, complete sequence	122172-122197	5	0.808
NZ_AP022575_10	10.2|2852727|26|NZ_AP022575|CRT	2852727-2852752	26	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	504706-504731	5	0.808
NZ_AP022575_10	10.2|2852727|26|NZ_AP022575|CRT	2852727-2852752	26	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	154270-154295	5	0.808
NZ_AP022575_10	10.2|2852727|26|NZ_AP022575|CRT	2852727-2852752	26	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	478688-478713	5	0.808
NZ_AP022575_10	10.2|2852727|26|NZ_AP022575|CRT	2852727-2852752	26	NC_013860	Azospirillum sp. B510 plasmid pAB510f, complete sequence	72934-72959	5	0.808
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	NZ_CP023976	Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.1, complete sequence	234547-234572	5	0.808
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	MT843275	Serratia phage vB_SspM_BZS1, complete genome	4576-4601	5	0.808
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	59662-59687	5	0.808
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	223955-223980	5	0.808
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	983408-983433	5	0.808
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	48945-48970	5	0.808
NZ_AP022575_10	10.9|2853111|26|NZ_AP022575|CRT	2853111-2853136	26	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	308837-308862	5	0.808
NZ_AP022575_10	10.11|2853210|26|NZ_AP022575|CRT	2853210-2853235	26	NZ_CP045303	Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence	168506-168531	5	0.808
NZ_AP022575_10	10.11|2853210|26|NZ_AP022575|CRT	2853210-2853235	26	NZ_CP017304	Rhodococcus sp. YL-1 plasmid pYLL2 sequence	194049-194074	5	0.808
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1613900-1613929	6	0.8
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NZ_LR134467	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 25, complete sequence	33261-33290	6	0.8
NZ_AP022575_2	2.1|64986|26|NZ_AP022575|PILER-CR	64986-65011	26	NZ_CP024308	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence	92792-92817	6	0.769
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_AP022335	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49c, complete sequence	103203-103230	6	0.786
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	139798-139825	6	0.786
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	541180-541207	6	0.786
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP014597	Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence	61777-61804	6	0.786
NZ_AP022575_5	5.4|413492|38|NZ_AP022575|CRT	413492-413529	38	MK450422	Mycobacterium phage RoMag, complete genome	7237-7274	6	0.842
NZ_AP022575_5	5.4|413492|38|NZ_AP022575|CRT	413492-413529	38	MG812493	Mycobacterium phage NuevoMundo, complete genome	9595-9632	6	0.842
NZ_AP022575_5	5.4|413492|38|NZ_AP022575|CRT	413492-413529	38	MK359346	Mycobacterium phage NoodleTree, complete genome	7487-7524	6	0.842
NZ_AP022575_5	5.4|413492|38|NZ_AP022575|CRT	413492-413529	38	MG812494	Mycobacterium phage Pier, complete genome	8158-8195	6	0.842
NZ_AP022575_5	5.4|413492|38|NZ_AP022575|CRT	413492-413529	38	MK359359	Mycobacterium phage Colt, complete genome	6597-6634	6	0.842
NZ_AP022575_9	9.69|2117235|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2117235-2117270	36	NZ_CP019438	Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence	23584-23619	6	0.833
NZ_AP022575_9	9.69|2117235|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2117235-2117270	36	NZ_CP019438	Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence	166196-166231	6	0.833
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	90804-90833	6	0.8
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	NZ_CP016283	Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence	2144-2173	6	0.8
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	252611-252640	6	0.8
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NZ_CP040096	Pantoea sp. SO10 plasmid unnamed1, complete sequence	714282-714311	7	0.767
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	178350-178379	7	0.767
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1484597-1484626	7	0.767
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NZ_CP006570	Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence	140222-140251	7	0.767
NZ_AP022575_2	2.2|65052|32|NZ_AP022575|PILER-CR	65052-65083	32	NC_012528	Deinococcus deserti VCD115 plasmid 3, complete sequence	246699-246730	7	0.781
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NZ_CP025431	Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence	121135-121162	7	0.75
NZ_AP022575_4	4.8|319286|28|NZ_AP022575|CRISPRCasFinder	319286-319313	28	NC_009717	Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence	190353-190380	7	0.75
NZ_AP022575_9	9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2113472-2113507	36	MF919502	Mycobacterium phage Demsculpinboyz, complete genome	54419-54454	7	0.806
NZ_AP022575_9	9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2113472-2113507	36	AY129336	Mycobacteriophage Che9d, complete genome	53258-53293	7	0.806
NZ_AP022575_9	9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2113472-2113507	36	NC_042030	Mycobacterium phage Yoshi, complete sequence	55696-55731	7	0.806
NZ_AP022575_9	9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2113472-2113507	36	KJ567041	Mycobacterium phage Zapner, complete genome	52284-52319	7	0.806
NZ_AP022575_9	9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2113472-2113507	36	NC_023698	Mycobacterium phage Avani, complete genome	51443-51478	7	0.806
NZ_AP022575_9	9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2113472-2113507	36	NC_022069	Mycobacterium phage Jabbawokkie, complete genome	52190-52225	7	0.806
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	38139-38168	7	0.767
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	NZ_KM017071	Sphingomonas sp. JE1 plasmid pJE1, complete sequence	64016-64045	7	0.767
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	106-135	7	0.767
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	967756-967785	7	0.767
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	318044-318073	7	0.767
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1226520-1226549	8	0.733
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	474345-474374	8	0.733
NZ_AP022575_9	9.58|2116444|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2116444-2116478	35	NZ_CP018080	Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence	146866-146900	8	0.771
NZ_AP022575_10	10.14|2853399|41|NZ_AP022575|CRT	2853399-2853439	41	KC736071	Mycobacterium phage WIVsmall, complete genome	29675-29715	8	0.805
NZ_AP022575_11	11.1|3049031|31|NZ_AP022575|CRISPRCasFinder	3049031-3049061	31	NZ_CP012575	Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence	125565-125595	8	0.742
NZ_AP022575_11	11.1|3049031|31|NZ_AP022575|CRISPRCasFinder	3049031-3049061	31	CP048046	Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence	125076-125106	8	0.742
NZ_AP022575_11	11.1|3049031|31|NZ_AP022575|CRISPRCasFinder	3049031-3049061	31	NZ_CP048050	Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence	69646-69676	8	0.742
NZ_AP022575_11	11.1|3049031|31|NZ_AP022575|CRISPRCasFinder	3049031-3049061	31	NZ_CP048048	Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence	34876-34906	8	0.742
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	NZ_CP041652	Streptomyces sp. RLB1-9 plasmid pRLB1-9.2, complete sequence	78553-78582	8	0.733
NZ_AP022575_1	1.5|64300|30|NZ_AP022575|CRT	64300-64329	30	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	629909-629938	9	0.7
NZ_AP022575_2	2.2|65052|32|NZ_AP022575|PILER-CR	65052-65083	32	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	80660-80691	9	0.719
NZ_AP022575_2	2.2|65052|32|NZ_AP022575|PILER-CR	65052-65083	32	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	80660-80691	9	0.719
NZ_AP022575_2	2.2|65052|32|NZ_AP022575|PILER-CR	65052-65083	32	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	160386-160417	9	0.719
NZ_AP022575_2	2.2|65052|32|NZ_AP022575|PILER-CR	65052-65083	32	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	263514-263545	9	0.719
NZ_AP022575_8	8.1|2108513|35|NZ_AP022575|PILER-CR,CRISPRCasFinder	2108513-2108547	35	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1212337-1212371	9	0.743
NZ_AP022575_9	9.65|2116948|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2116948-2116983	36	JQ807255	Environmental Halophage eHP-36, partial genome	15508-15543	9	0.75
NZ_AP022575_9	9.67|2117092|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2117092-2117128	37	NZ_CP025961	Rhodococcus qingshengii strain djl-6-2 plasmid pDJL2, complete sequence	22176-22212	9	0.757
NZ_AP022575_10	10.5|2852913|35|NZ_AP022575|CRT	2852913-2852947	35	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	160589-160623	9	0.743
NZ_AP022575_13	13.1|3421529|33|NZ_AP022575|CRISPRCasFinder	3421529-3421561	33	NZ_CP013345	Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence	168824-168856	9	0.727
NZ_AP022575_5	5.4|413492|38|NZ_AP022575|CRT	413492-413529	38	NZ_CP054606	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence	9385-9422	10	0.737
NZ_AP022575_9	9.24|2113972|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2113972-2114006	35	MG592662	Vibrio phage 2.058.O._10N.286.46.B8, partial genome	51086-51120	10	0.714
NZ_AP022575_9	9.24|2113972|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2113972-2114006	35	MG592672	Vibrio phage 3.058.O._10N.286.46.B8, partial genome	51028-51062	10	0.714
NZ_AP022575_9	9.60|2116587|34|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2116587-2116620	34	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	136735-136768	10	0.706
NZ_AP022575_10	10.5|2852913|35|NZ_AP022575|CRT	2852913-2852947	35	NZ_CP015738	Shinella sp. HZN7 plasmid pShin-02, complete sequence	163088-163122	10	0.714
NZ_AP022575_10	10.5|2852913|35|NZ_AP022575|CRT	2852913-2852947	35	NC_019407	Caulobacter phage CcrMagneto, complete genome	37012-37046	10	0.714
NZ_AP022575_13	13.1|3421529|33|NZ_AP022575|CRISPRCasFinder	3421529-3421561	33	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	281776-281808	10	0.697
NZ_AP022575_15	15.1|3501604|30|NZ_AP022575|CRISPRCasFinder	3501604-3501633	30	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	647559-647588	10	0.667
NZ_AP022575_9	9.60|2116587|34|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR	2116587-2116620	34	NZ_CP010630	Phaeobacter inhibens strain P78 plasmid pP78_a, complete sequence	120467-120500	11	0.676
NZ_AP022575_10	10.14|2853399|41|NZ_AP022575|CRT	2853399-2853439	41	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1203177-1203217	11	0.732
NZ_AP022575_10	10.5|2852913|35|NZ_AP022575|CRT	2852913-2852947	35	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	318370-318404	12	0.657
NZ_AP022575_10	10.5|2852913|35|NZ_AP022575|CRT	2852913-2852947	35	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1449489-1449523	20	0.429

1. spacer 4.3|319038|21|NZ_AP022575|CRISPRCasFinder matches to NZ_LR134467 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 25, complete sequence) position: , mismatch: 1, identity: 0.952

aacggcggggccggcggcacc	CRISPR spacer
aacggcgtggccggcggcacc	Protospacer
******* *************

2. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to NZ_CP006989 (Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence) position: , mismatch: 1, identity: 0.952

cgtggcggcacgggcggcgcc	CRISPR spacer
cgtggcggcacggtcggcgcc	Protospacer
************* *******

3. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.952

cgtggcggcacgggcggcgcc	CRISPR spacer
cgtggcggcacggtcggcgcc	Protospacer
************* *******

4. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 1, identity: 0.952

cgtggcggcacgggcggcgcc	CRISPR spacer
cgtggcggcacggtcggcgcc	Protospacer
************* *******

5. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 1, identity: 0.952

cgtggcggcacgggcggcgcc	CRISPR spacer
cgtgccggcacgggcggcgcc	Protospacer
**** ****************

6. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to NZ_CP021126 (Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence) position: , mismatch: 1, identity: 0.952

cgtggcggcacgggcggcgcc	CRISPR spacer
cgtggcggcacggtcggcgcc	Protospacer
************* *******

7. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 1, identity: 0.952

cgtggcggcacgggcggcgcc	CRISPR spacer
cgtggcggcacggtcggcgcc	Protospacer
************* *******

8. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 1, identity: 0.952

cgtggcggcacgggcggcgcc	CRISPR spacer
cgtggcggcacgggcggcggc	Protospacer
******************* *

9. spacer 10.6|2852973|20|NZ_AP022575|CRT matches to NZ_CP016462 (Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence) position: , mismatch: 1, identity: 0.95

aagttgccctggccgccgaa	CRISPR spacer
cagttgccctggccgccgaa	Protospacer
 *******************

10. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP053906 (Hymenobacter sp. BRD67 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.917

tagccgccgtagccgccgttgcct	CRISPR spacer
gagccgccgtagccgccggtgcct	Protospacer
 ***************** *****

11. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.917

tagccgccgtagccgccgttgcct	CRISPR spacer
tagccgccgtagccgccgtagccg	Protospacer
******************* *** 

12. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MH001451 (Mycobacterium phage Nairb, complete genome) position: , mismatch: 2, identity: 0.917

tagccgccgtagccgccgttgcct	CRISPR spacer
tagccgccgttgccgccgttgccg	Protospacer
********** ************ 

13. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MF155936 (Mycobacterium phage ZenTime222, complete genome) position: , mismatch: 2, identity: 0.917

tagccgccgtagccgccgttgcct	CRISPR spacer
tagccgccgttgccgccgttgccg	Protospacer
********** ************ 

14. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MK494089 (Mycobacterium phage Ibrahim, complete genome) position: , mismatch: 2, identity: 0.917

tagccgccgtagccgccgttgcct	CRISPR spacer
tagccgccgttgccgccgttgccg	Protospacer
********** ************ 

15. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NC_024135 (Mycobacterium phage Bernal13, complete genome) position: , mismatch: 2, identity: 0.917

tagccgccgtagccgccgttgcct	CRISPR spacer
tagccgccgttgccgccgttgccg	Protospacer
********** ************ 

16. spacer 1.8|64453|24|NZ_AP022575|CRT matches to KM591905 (Mycobacterium phage RonRayGun, complete genome) position: , mismatch: 2, identity: 0.917

tagccgccgtagccgccgttgcct	CRISPR spacer
tagccgccgttgccgccgttgccg	Protospacer
********** ************ 

17. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MN735432 (Mycobacteriophage Whitty, complete genome) position: , mismatch: 2, identity: 0.917

tagccgccgtagccgccgttgcct	CRISPR spacer
tagccgccgttgccgccgttgccg	Protospacer
********** ************ 

18. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 2, identity: 0.917

tagccgccgtagccgccgttgcct	CRISPR spacer
ttgccgccgttgccgccgttgcct	Protospacer
* ******** *************

19. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to MN694642 (Marine virus AFVG_250M1139, complete genome) position: , mismatch: 2, identity: 0.905

cgtggcggcacgggcggcgcc	CRISPR spacer
ggtggcggcacgggcggcgcg	Protospacer
 ******************* 

20. spacer 4.6|319202|21|NZ_AP022575|CRISPRCasFinder matches to MN694309 (Marine virus AFVG_250M1141, complete genome) position: , mismatch: 2, identity: 0.905

cgtggcggcacgggcggcgcc	CRISPR spacer
ggtggcggcacgggcggcgcg	Protospacer
 ******************* 

21. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MH697579 (Mycobacterium phage Cane17, complete genome) position: , mismatch: 2, identity: 0.923

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacactggcggcggtgacactg	Protospacer
*********..***************

22. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MG812493 (Mycobacterium phage NuevoMundo, complete genome) position: , mismatch: 2, identity: 0.923

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacactggcggcggtgacactg	Protospacer
*********..***************

23. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MK359346 (Mycobacterium phage NoodleTree, complete genome) position: , mismatch: 2, identity: 0.923

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacactggcggcggtgacactg	Protospacer
*********..***************

24. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MG812494 (Mycobacterium phage Pier, complete genome) position: , mismatch: 2, identity: 0.923

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacactggcggcggtgacactg	Protospacer
*********..***************

25. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MK450422 (Mycobacterium phage RoMag, complete genome) position: , mismatch: 2, identity: 0.923

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacactggcggcggtgacactg	Protospacer
*********..***************

26. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MK450422 (Mycobacterium phage RoMag, complete genome) position: , mismatch: 2, identity: 0.923

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacactggcggcggtgacactg	Protospacer
*********..***************

27. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.923

gcgccattggtgccatcgccg-ccatc	CRISPR spacer
gcgtcattggtgccatcgccgaccat-	Protospacer
***.***************** **** 

28. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 2, identity: 0.913

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
ccgaaggcgccgacgccgccgcg	Protospacer
************ *.********

29. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
tagccgccgtagccgccgtacccc	Protospacer
*******************  **.

30. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
tagacgccgtcgccgccgttgccc	Protospacer
*** ****** ************.

31. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_LR134446 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 4, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
aagccgccgttgccgccgttgccg	Protospacer
 ********* ************ 

32. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
acgccgccgtaaccgccgttgcct	Protospacer
  *********.************

33. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
ttgccgccgttgccgccgttgccg	Protospacer
* ******** ************ 

34. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
ttgccgccgttgccgccgttgccg	Protospacer
* ******** ************ 

35. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
ttgccgccgttgccgccgttgccg	Protospacer
* ******** ************ 

36. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
tcgccgccgttgccgccgttgccc	Protospacer
* ******** ************.

37. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
acgccgccgtcgccgccgttgcct	Protospacer
  ******** *************

38. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MK524490 (Mycobacterium phage Donny, complete genome) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
gagccgccgttgccgccgttgccg	Protospacer
 ********* ************ 

39. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MT939492 (Xanthomonas phage Xoo-sp14, complete genome) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
gagccgccgttgccgccgttgccg	Protospacer
 ********* ************ 

40. spacer 1.8|64453|24|NZ_AP022575|CRT matches to JN699007 (Mycobacterium phage Acadian, complete genome) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
gagccgccgttgccgccgttgccg	Protospacer
 ********* ************ 

41. spacer 1.8|64453|24|NZ_AP022575|CRT matches to GQ303260 (Mycobacterium phage ET08, complete genome) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
gcgccgccgttgccgccgttgcct	Protospacer
  ******** *************

42. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MT889381 (Mycobacterium phage Suigeneris, complete genome) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
gagccgccgttgccgccgttgccg	Protospacer
 ********* ************ 

43. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NC_028986 (Mycobacterium phage Alice, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
gcgccgccgttgccgccgttgcct	Protospacer
  ******** *************

44. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
ttgccgccgtagccgtcgttgccc	Protospacer
* *************.*******.

45. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
ttgccgccgtagccgtcgttgccc	Protospacer
* *************.*******.

46. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

tagccgccgtagccgccgttgcct	CRISPR spacer
tcgccgccgtagccgtcgttgccc	Protospacer
* *************.*******.

47. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MN945901 (Mycobacterium phage Ximenita, complete genome) position: , mismatch: 3, identity: 0.885

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggcgacaccggcggcggtgacaccg	Protospacer
***.******.*************.*

48. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MK359359 (Mycobacterium phage Colt, complete genome) position: , mismatch: 3, identity: 0.885

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacactggcggcggtgacaccg	Protospacer
*********..*************.*

49. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NC_019958 (Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence) position: , mismatch: 3, identity: 0.885

gcgccattggtgccatcgccgccatc	CRISPR spacer
gtgccatgggtgccatcggcgccatc	Protospacer
*.***** ********** *******

50. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
acgacggcgccgtcaccgccgca	Protospacer
 *** *****************.

51. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
ccgaaggccccgtcaccgccggc	Protospacer
******** ************  

52. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
cgcaaggcgccgtcaccgccgcc	Protospacer
*  ******************* 

53. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
cgcaaggcgccgtcaccgccgcc	Protospacer
*  ******************* 

54. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
ccgaaggcgccgtcaccggcgaa	Protospacer
****************** ** .

55. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
ccgaacgcgccgtcaccgccgtc	Protospacer
***** ***************. 

56. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
ccgaaggcgccgtcgccgccggt	Protospacer
**************.******  

57. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
ccgaacgcgccgtcaccgccgtc	Protospacer
***** ***************. 

58. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
ccgaaggcgccgtcaccggcgaa	Protospacer
****************** ** .

59. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
ccgaaggcgccgtcaccggcgaa	Protospacer
****************** ** .

60. spacer 10.7|2853018|23|NZ_AP022575|CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 3, identity: 0.87

ccgaaggcgccgtcaccgccgcg	CRISPR spacer
ccgaaggcgccgtcaccggcgaa	Protospacer
****************** ** .

61. spacer 10.11|2853210|26|NZ_AP022575|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 3, identity: 0.885

gggccaccgaacccggtgccggcgtc	CRISPR spacer
gggccgccgaactcggtgccggcggc	Protospacer
*****.******.*********** *

62. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
gcgccgccgtagccgccgtagccg	Protospacer
  ***************** *** 

63. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
gtgccgccgttgccgccgttgccg	Protospacer
  ******** ************ 

64. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MK814754 (Mycobacterium phage Sumter, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

65. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MK814754 (Mycobacterium phage Sumter, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

66. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MN369739 (Mycobacterium phage Kenuha5, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

67. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MK967397 (Mycobacterium phage Mahavrat, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

68. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MT522000 (Mycobacterium phage Soul22, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

69. spacer 1.8|64453|24|NZ_AP022575|CRT matches to KY348865 (Mycobacterium phage Bubbles123, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

70. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MN428047 (Mycobacterium phage Doomphist, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

71. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MF919502 (Mycobacterium phage Demsculpinboyz, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

72. spacer 1.8|64453|24|NZ_AP022575|CRT matches to AY129336 (Mycobacteriophage Che9d, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

73. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MT771340 (Mycobacterium phage Jorgensen, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

74. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MK359343 (Mycobacterium phage Pollywog, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

75. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NC_042030 (Mycobacterium phage Yoshi, complete sequence) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

76. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NC_048729 (Mycobacterium phage Renaud18, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

77. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MK937593 (Mycobacterium phage Flypotenuse, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgcca	Protospacer
. ******** ************ 

78. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MT889380 (Mycobacterium phage Coco12, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

79. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NC_026585 (Mycobacteriophage Estave1, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

80. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MK305886 (Mycobacterium phage Poenanya, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

81. spacer 1.8|64453|24|NZ_AP022575|CRT matches to JN859129 (Mycobacterium virus DotProduct, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

82. spacer 1.8|64453|24|NZ_AP022575|CRT matches to KC736071 (Mycobacterium phage WIVsmall, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ccgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

83. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MG925354 (Mycobacterium phage Ogopogo, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

84. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NC_023698 (Mycobacterium phage Avani, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

85. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MH536820 (Mycobacterium phage Glexan, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgcca	Protospacer
. ******** ************ 

86. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NC_011054 (Mycobacterium phage Boomer, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

87. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MT114167 (Mycobacterium phage Phanphagia, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

88. spacer 1.8|64453|24|NZ_AP022575|CRT matches to MH077585 (Mycobacterium phage TChen, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

89. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NC_048788 (Mycobacterium phage ThetaBob, complete genome) position: , mismatch: 4, identity: 0.833

tagccgccgtagccgccgttgcct	CRISPR spacer
ctgccgccgttgccgccgttgccg	Protospacer
. ******** ************ 

90. spacer 2.1|64986|26|NZ_AP022575|PILER-CR matches to NZ_LT703506 (Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 2) position: , mismatch: 4, identity: 0.846

ttcccaccgaccccgcccaacagccc	CRISPR spacer
cgcccaccgaccccgccgaacggccc	Protospacer
. *************** ***.****

91. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 4, identity: 0.857

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
aggcgccgccgacaagagcggtgacgac	Protospacer
 ********** ****.*********.*

92. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP038031 (Rhodococcus ruber strain R1 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.857

-cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
acggca-cgccgtcgagggcggtgacggt	Protospacer
 ****. *******.*************.

93. spacer 5.3|413447|26|NZ_AP022575|CRT matches to NC_019958 (Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence) position: , mismatch: 4, identity: 0.846

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacacccgcggcggtgagacga	Protospacer
********** ********** ** .

94. spacer 5.4|413492|38|NZ_AP022575|CRT matches to MK450422 (Mycobacterium phage RoMag, complete genome) position: , mismatch: 4, identity: 0.895

tgacaccagcggcggtgacactggcggcggtgacacca	CRISPR spacer
tgacactggcggcggtgacactggcggcggtgacactg	Protospacer
******..****************************..

95. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP010611 (Phaeobacter inhibens strain P92 plasmid pP92_a, complete sequence) position: , mismatch: 4, identity: 0.846

gcgccattggtgccatcgccgccatc	CRISPR spacer
cagccattggtgccatcgccgccaat	Protospacer
  ********************** .

96. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP010716 (Phaeobacter piscinae strain P18 plasmid pP18_a, complete sequence) position: , mismatch: 4, identity: 0.846

gcgccattggtgccatcgccgccatc	CRISPR spacer
cagccattggtgccatcgccgccaat	Protospacer
  ********************** .

97. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP010662 (Phaeobacter inhibens strain P74 plasmid pP74_a, complete sequence) position: , mismatch: 4, identity: 0.846

gcgccattggtgccatcgccgccatc	CRISPR spacer
cagccattggtgccatcgccgccaat	Protospacer
  ********************** .

98. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NC_015065 (Granulicella tundricola MP5ACTX9 plasmid pACIX902, complete sequence) position: , mismatch: 4, identity: 0.846

gcgccattggtgccatcgccgccatc	CRISPR spacer
acgccattggtcccgtcgccgccata	Protospacer
.********** **.********** 

99. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP012988 (Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence) position: , mismatch: 4, identity: 0.846

gcgccattggtgccatcgccgccatc	CRISPR spacer
gtaccattggcaccatcgccgccatc	Protospacer
*..*******..**************

100. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP045676 (Klebsiella pneumoniae strain WSD411 plasmid pWSD411_3, complete sequence) position: , mismatch: 4, identity: 0.846

gcgccattggtgccatcgccgccatc	CRISPR spacer
gtaccattggcaccatcgccgccatc	Protospacer
*..*******..**************

101. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP012993 (Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence) position: , mismatch: 4, identity: 0.846

gcgccattggtgccatcgccgccatc	CRISPR spacer
gtaccattggcaccatcgccgccatc	Protospacer
*..*******..**************

102. spacer 10.2|2852727|26|NZ_AP022575|CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 4, identity: 0.846

ttgccggtggtcgtggagttgctggt	CRISPR spacer
atcccggtggtcgaggagatgctggt	Protospacer
 * ********** **** *******

103. spacer 10.2|2852727|26|NZ_AP022575|CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.846

ttgccggtggtcgtggagttgctggt	CRISPR spacer
atcccggtggtcgaggagatgctggt	Protospacer
 * ********** **** *******

104. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 4, identity: 0.846

acgccgctggcgctgctcccgccgtt	CRISPR spacer
ccgccgctggcgctgatcccgctggt	Protospacer
 ************** ******.* *

105. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 4, identity: 0.846

acgccgctggcgctgctcccgccgtt	CRISPR spacer
tcgccgctggcgctgatcccggcgct	Protospacer
 ************** ***** **.*

106. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to MG732930 (Enterobacter phage Ec_L1, complete genome) position: , mismatch: 4, identity: 0.846

acgccgctggcgctgctcccgccgtt	CRISPR spacer
ccgccgctgccgctgctgccgccgct	Protospacer
 ******** ******* ******.*

107. spacer 10.11|2853210|26|NZ_AP022575|CRT matches to NC_012855 (Ralstonia pickettii 12D plasmid pRp12D01, complete sequence) position: , mismatch: 4, identity: 0.846

gggccaccgaacccggtgccggcgtc	CRISPR spacer
gggccaccgaaccaggtgccgacgat	Protospacer
************* *******.** .

108. spacer 10.11|2853210|26|NZ_AP022575|CRT matches to NZ_CP007256 (Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence) position: , mismatch: 4, identity: 0.846

gggccaccgaacccggtgccggcgtc	CRISPR spacer
aggccgccgaacccggtgccgccgcc	Protospacer
.****.*************** **.*

109. spacer 10.11|2853210|26|NZ_AP022575|CRT matches to NZ_CP047175 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.846

gggccaccgaacccggtgccggcgtc	CRISPR spacer
gggccaccgattccggtgccggctac	Protospacer
********** .***********  *

110. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NZ_CP016500 (Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence) position: , mismatch: 5, identity: 0.833

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
gcgaaggcgccgccaagcgccgtgaagccg	Protospacer
 **  * *********.*************

111. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NZ_CP045856 (Agrobacterium sp. MA01 plasmid punanmed2, complete sequence) position: , mismatch: 5, identity: 0.833

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
gcgaaggcgccgccaagcgccgtgaagccg	Protospacer
 **  * *********.*************

112. spacer 1.8|64453|24|NZ_AP022575|CRT matches to NZ_CP012183 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-2, complete sequence) position: , mismatch: 5, identity: 0.792

tagccgccgtagccgccgttgcct	CRISPR spacer
acgccgccgtagccgccgttggtc	Protospacer
  ******************* ..

113. spacer 2.1|64986|26|NZ_AP022575|PILER-CR matches to MH779514 (Mycobacterium phage Paito, complete genome) position: , mismatch: 5, identity: 0.808

ttcccaccgaccccgcccaacagccc	CRISPR spacer
ggcccgccgaccccgcccaacagcgg	Protospacer
  ***.******************  

114. spacer 2.1|64986|26|NZ_AP022575|PILER-CR matches to NZ_CP022209 (Burkholderia gladioli pv. gladioli strain FDAARGOS_188 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ttcccaccgaccccgcccaacagccc	CRISPR spacer
aggccaccgagcccgcccaccagccc	Protospacer
   ******* ******** ******

115. spacer 2.1|64986|26|NZ_AP022575|PILER-CR matches to NZ_CP009321 (Burkholderia gladioli strain ATCC 10248 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.808

ttcccaccgaccccgcccaacagccc	CRISPR spacer
aggccaccgagcccgcccaccagccc	Protospacer
   ******* ******** ******

116. spacer 2.1|64986|26|NZ_AP022575|PILER-CR matches to NZ_CP022007 (Burkholderia gladioli pv. gladioli strain KACC 11889 plasmid pls1, complete sequence) position: , mismatch: 5, identity: 0.808

ttcccaccgaccccgcccaacagccc	CRISPR spacer
aggccaccgagcccgcccaccagccc	Protospacer
   ******* ******** ******

117. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 5, identity: 0.821

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
cggcgccgccgtcaacgacggtgacctg	Protospacer
*************** *.*******   

118. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 5, identity: 0.821

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
cgacgccgccggcaagggcggtgccatc	Protospacer
**.******** *********** *. *

119. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

-cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
gcagt-ccgccgtccagggcggtggcggc	Protospacer
 *.*. ******** *********.****

120. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 5, identity: 0.821

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
cgacgccgccggcaagggcggtgccatc	Protospacer
**.******** *********** *. *

121. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 5, identity: 0.821

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
aggcgacgccgtcgagggcggtgatcgc	Protospacer
 **** *******.**********. **

122. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 5, identity: 0.821

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
ccgggccgccgtcgaggtcggtgacggt	Protospacer
* * *********.*** *********.

123. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_LN832560 (Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence) position: , mismatch: 5, identity: 0.821

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
cggtgccgccgtccagggcggtggtgcc	Protospacer
***.********* *********..* *

124. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP047145 (Streptomyces sp. HF10 plasmid plas1, complete sequence) position: , mismatch: 5, identity: 0.821

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
cggcgacgccgtcaagggcggccggggc	Protospacer
***** ***************. . ***

125. spacer 5.3|413447|26|NZ_AP022575|CRT matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacaccggcggcggtgataagc	Protospacer
**********.**********.*   

126. spacer 5.3|413447|26|NZ_AP022575|CRT matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgacaccggcggcggtgataagc	Protospacer
**********.**********.*   

127. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MG812490 (Mycobacterium phage Holeinone, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

128. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MN428049 (Mycobacterium phage West99, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

129. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MN586045 (Mycobacterium phage Brownie5, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

130. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MH001452 (Mycobacterium phage Kheth, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

131. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MH697584 (Mycobacterium phage FrenchFry, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

132. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MN813678 (Mycobacterium phage Lephleur, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

133. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MG757162 (Mycobacterium phage Opia, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

134. spacer 5.3|413447|26|NZ_AP022575|CRT matches to KT365402 (Mycobacterium phage Tres, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

135. spacer 5.3|413447|26|NZ_AP022575|CRT matches to KM101117 (Mycobacterium phage LizLemon, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

136. spacer 5.3|413447|26|NZ_AP022575|CRT matches to JN698991 (Mycobacterium phage Hedgerow, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

137. spacer 5.3|413447|26|NZ_AP022575|CRT matches to NC_043767 (Mycobacterium virus TA17a, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

138. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MN586046 (Mycobacterium phage Tinciduntsolum, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

139. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MT639652 (Mycobacterium phage MasterPo, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

140. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MK620898 (Mycobacterium phage Coffee, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

141. spacer 5.3|413447|26|NZ_AP022575|CRT matches to JN699004 (Mycobacterium phage Ares, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

142. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MG812491 (Mycobacterium phage ItsyBitsy1, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

143. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MN234225 (Mycobacterium phage Rhinoforte, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

144. spacer 5.3|413447|26|NZ_AP022575|CRT matches to DQ398048 (Mycobacterium phage Qyrzula, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

145. spacer 5.3|413447|26|NZ_AP022575|CRT matches to KR997932 (Mycobacterium phage Godines, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

146. spacer 5.3|413447|26|NZ_AP022575|CRT matches to AY129334 (Mycobacterium phage Rosebush, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

147. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MH590591 (Mycobacterium phage Sabella, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

148. spacer 5.3|413447|26|NZ_AP022575|CRT matches to JN618996 (Mycobacterium phage Arbiter, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

149. spacer 5.3|413447|26|NZ_AP022575|CRT matches to KX443696 (Mycobacterium phage Laurie, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

150. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MH727546 (Mycobacterium phage Eaglehorse, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

151. spacer 5.3|413447|26|NZ_AP022575|CRT matches to MK061411 (Mycobacterium phage Faze9, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

152. spacer 5.3|413447|26|NZ_AP022575|CRT matches to KT880194 (Mycobacterium phage Glass, complete genome) position: , mismatch: 5, identity: 0.808

cggtgacaccagcggcggtgacactg	CRISPR spacer
cggtgccaccaccggcggtgacaagc	Protospacer
***** ***** ***********   

153. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 5, identity: 0.808

gcgccattggtgccatcgccgccatc	CRISPR spacer
ccgcaataggtgccatcgccgccagt	Protospacer
 *** ** **************** .

154. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 5, identity: 0.808

gcgccattggtgccatcgccgccatc	CRISPR spacer
ccgcaataggtgccatcgccgccagt	Protospacer
 *** ** **************** .

155. spacer 10.1|2852676|26|NZ_AP022575|CRT matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 5, identity: 0.808

gcgccattggtgccatcgccgccatc	CRISPR spacer
ccgcaataggtgccatcgccgccagt	Protospacer
 *** ** **************** .

156. spacer 10.2|2852727|26|NZ_AP022575|CRT matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 5, identity: 0.808

ttgccggtggtcgtggagttgctggt	CRISPR spacer
cagccggtggtcgtggagttcgtgga	Protospacer
. ******************  *** 

157. spacer 10.2|2852727|26|NZ_AP022575|CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 5, identity: 0.808

ttgccggtggtcgtggagttgctggt	CRISPR spacer
gtgccggtggtcgcggagttcctgaa	Protospacer
 ************.****** ***. 

158. spacer 10.2|2852727|26|NZ_AP022575|CRT matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.808

ttgccggtggtcgtggagttgctggt	CRISPR spacer
gcgccgatggtggtggagttgctggc	Protospacer
 .****.**** *************.

159. spacer 10.2|2852727|26|NZ_AP022575|CRT matches to NC_013860 (Azospirillum sp. B510 plasmid pAB510f, complete sequence) position: , mismatch: 5, identity: 0.808

ttgccggtggtcgtggagttgctggt	CRISPR spacer
gaggcggtggccgtggagttgctggc	Protospacer
  * ******.**************.

160. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to NZ_CP023976 (Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.1, complete sequence) position: , mismatch: 5, identity: 0.808

acgccgctggcgctgctcccgccgtt	CRISPR spacer
ggcccgctggcgctgctcccggcgtg	Protospacer
.  ****************** *** 

161. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 5, identity: 0.808

acgccgctggcgctgctcccgccgtt	CRISPR spacer
acgccgctggcgctgcacccgcaaaa	Protospacer
**************** ***** .  

162. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 5, identity: 0.808

acgccgctggcgctgctcccgccgtt	CRISPR spacer
ggcccgctggcgctgctcccggcgtg	Protospacer
.  ****************** *** 

163. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.808

acgccgctggcgctgctcccgccgtt	CRISPR spacer
gtgccgctgccgctgctcccgccggc	Protospacer
..******* ************** .

164. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.808

acgccgctggcgctgctcccgccgtt	CRISPR spacer
gagccgctcgcgctgctcgcgccgtg	Protospacer
. ****** ********* ****** 

165. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

acgccgctggcgctgctcccgccgtt	CRISPR spacer
cggccgctggcgctgctggcgccgtg	Protospacer
  ***************  ****** 

166. spacer 10.9|2853111|26|NZ_AP022575|CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

acgccgctggcgctgctcccgccgtt	CRISPR spacer
ccgccgctggcgctgcgcgcgccgga	Protospacer
 *************** * *****  

167. spacer 10.11|2853210|26|NZ_AP022575|CRT matches to NZ_CP045303 (Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

gggccaccgaacccggtgccggcgtc	CRISPR spacer
aggccaccgagcccggtgccggcccg	Protospacer
.*********.************ . 

168. spacer 10.11|2853210|26|NZ_AP022575|CRT matches to NZ_CP017304 (Rhodococcus sp. YL-1 plasmid pYLL2 sequence) position: , mismatch: 5, identity: 0.808

gggccaccgaacccggtgccggcgtc	CRISPR spacer
ccaccaccgaacccgatgccggcgtt	Protospacer
  .************.*********.

169. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 6, identity: 0.8

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
tagcgcacgccgccgaacgccgagaagccg	Protospacer
* **   *******.******* *******

170. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NZ_LR134467 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 25, complete sequence) position: , mismatch: 6, identity: 0.8

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
gcgttgccgccgccgaacgccgtgatccgg	Protospacer
 **.**********.**********  * *

171. spacer 2.1|64986|26|NZ_AP022575|PILER-CR matches to NZ_CP024308 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence) position: , mismatch: 6, identity: 0.769

ttcccaccgaccccgcccaacagccc	CRISPR spacer
cacggaccgaccccgcccaacagcat	Protospacer
. *  ******************* .

172. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_AP022335 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49c, complete sequence) position: , mismatch: 6, identity: 0.786

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
cggcgccgacgtcaagggcggcgatacg	Protospacer
******** ************.**..  

173. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 6, identity: 0.786

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
cggcgccgccgtcgagggcgggtccttc	Protospacer
*************.*******   *  *

174. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.786

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
gggggccgccgtcaagggcgttgaaacc	Protospacer
 ** **************** *** . *

175. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP014597 (Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
tcgccccgccgccaagggcggtgacctc	Protospacer
. ** ******.*************  *

176. spacer 5.4|413492|38|NZ_AP022575|CRT matches to MK450422 (Mycobacterium phage RoMag, complete genome) position: , mismatch: 6, identity: 0.842

tgacaccagcggcggtgacactggcggcggtgacacca	CRISPR spacer
tggcgctggcggcggtgacactggcggcggtgacactg	Protospacer
**.*.*..****************************..

177. spacer 5.4|413492|38|NZ_AP022575|CRT matches to MG812493 (Mycobacterium phage NuevoMundo, complete genome) position: , mismatch: 6, identity: 0.842

tgacaccagcggcggtgacactggcggcggtgacacca	CRISPR spacer
tggcgctggcggcggtgacactggcggcggtgacactg	Protospacer
**.*.*..****************************..

178. spacer 5.4|413492|38|NZ_AP022575|CRT matches to MK359346 (Mycobacterium phage NoodleTree, complete genome) position: , mismatch: 6, identity: 0.842

tgacaccagcggcggtgacactggcggcggtgacacca	CRISPR spacer
tggcgctggcggcggtgacactggcggcggtgacactg	Protospacer
**.*.*..****************************..

179. spacer 5.4|413492|38|NZ_AP022575|CRT matches to MG812494 (Mycobacterium phage Pier, complete genome) position: , mismatch: 6, identity: 0.842

tgacaccagcggcggtgacactggcggcggtgacacca	CRISPR spacer
tggcgctggcggcggtgacactggcggcggtgacactg	Protospacer
**.*.*..****************************..

180. spacer 5.4|413492|38|NZ_AP022575|CRT matches to MK359359 (Mycobacterium phage Colt, complete genome) position: , mismatch: 6, identity: 0.842

tgacaccagc----ggcggtgacactggcggcggtgacacca	CRISPR spacer
----acctgcctcaggcggtgacactggcggcggtgacaccg	Protospacer
    *** **    ***************************.

181. spacer 9.69|2117235|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019438 (Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.833

cgtcgccggggtccgcgaaatggtcgctgccgtcgg	CRISPR spacer
tgtcgccggggtgcgcgaaatggtcgatgccgatag	Protospacer
.*********** ************* ***** ..*

182. spacer 9.69|2117235|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019438 (Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.833

cgtcgccggggtccgcgaaatggtcgctgccgtcgg	CRISPR spacer
tgtcgccggggtgcgcgaaatggtcgatgccgatag	Protospacer
.*********** ************* ***** ..*

183. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 6, identity: 0.8

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
cgcattcctccgccacgcggacggcatcgt	Protospacer
* * *.  ************** *******

184. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to NZ_CP016283 (Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence) position: , mismatch: 6, identity: 0.8

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
cgcccgggcccgcctcgcggaccgcatcgc	Protospacer
* **. **.***** **************.

185. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 6, identity: 0.8

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
cgcggccgtccggcacgccgaccgcatcgt	Protospacer
* *  * ***** ***** ***********

186. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
acgacaacgccgccaaaggccgtgaagctg	Protospacer
 ** .. ********** **********.*

187. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
tgcgtgccgccgcaaaacgccgtgacgcga	Protospacer
*   ********* *********** ** .

188. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 7, identity: 0.767

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
tgcgtgccgccgcaaaacgccgtgacgcga	Protospacer
*   ********* *********** ** .

189. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
acaaaaccggcgccaaacgccgtgatgccg	Protospacer
 *.  .*** *************** ****

190. spacer 2.2|65052|32|NZ_AP022575|PILER-CR matches to NC_012528 (Deinococcus deserti VCD115 plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.781

gcaccctgcaggacacctgcctggccattttg	CRISPR spacer
ggatactgccggccacctgcctggccatctcg	Protospacer
* *. **** ** ***************.*.*

191. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NZ_CP025431 (Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence) position: , mismatch: 7, identity: 0.75

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
gggcggcgccggcaagggcggtgaaatg	Protospacer
 **** ***** ************ .  

192. spacer 4.8|319286|28|NZ_AP022575|CRISPRCasFinder matches to NC_009717 (Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence) position: , mismatch: 7, identity: 0.75

cggcgccgccgtcaagggcggtgacggc	CRISPR spacer
cggcgccggcgtcatgggcggtggatcg	Protospacer
******** ***** ********.    

193. spacer 9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to MF919502 (Mycobacterium phage Demsculpinboyz, complete genome) position: , mismatch: 7, identity: 0.806

ctgacctgcggcctgtggctgccggtgtggctgatc	CRISPR spacer
ctgctgtgcggtttgtggctgccggtgtggcttgtc	Protospacer
*** . *****..******************* .**

194. spacer 9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to AY129336 (Mycobacteriophage Che9d, complete genome) position: , mismatch: 7, identity: 0.806

ctgacctgcggcctgtggctgccggtgtggctgatc	CRISPR spacer
ctgctgtgcggtttgtggctgccggtgtggcttgtc	Protospacer
*** . *****..******************* .**

195. spacer 9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to NC_042030 (Mycobacterium phage Yoshi, complete sequence) position: , mismatch: 7, identity: 0.806

ctgacctgcggcctgtggctgccggtgtggctgatc	CRISPR spacer
ctgctgtgcggtttgtggctgccggtgtggcttgtc	Protospacer
*** . *****..******************* .**

196. spacer 9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to KJ567041 (Mycobacterium phage Zapner, complete genome) position: , mismatch: 7, identity: 0.806

ctgacctgcggcctgtggctgccggtgtggctgatc	CRISPR spacer
ctgctgtgcggtttgtggctgccggtgtggcttgtc	Protospacer
*** . *****..******************* .**

197. spacer 9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to NC_023698 (Mycobacterium phage Avani, complete genome) position: , mismatch: 7, identity: 0.806

ctgacctgcggcctgtggctgccggtgtggctgatc	CRISPR spacer
ctgctgtgcggtttgtggctgccggtgtggcttgtc	Protospacer
*** . *****..******************* .**

198. spacer 9.17|2113472|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to NC_022069 (Mycobacterium phage Jabbawokkie, complete genome) position: , mismatch: 7, identity: 0.806

ctgacctgcggcctgtggctgccggtgtggctgatc	CRISPR spacer
ctgctgtgcggtttgtggctgccggtgtggcttgtc	Protospacer
*** . *****..******************* .**

199. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 7, identity: 0.767

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
cgcactcctccgccacgcggacggcatcgt	Protospacer
* * ..  ************** *******

200. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to NZ_KM017071 (Sphingomonas sp. JE1 plasmid pJE1, complete sequence) position: , mismatch: 7, identity: 0.767

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
ccgtcaggtccgccacgctgacggcatcgt	Protospacer
*. .. ************ *** *******

201. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 7, identity: 0.767

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
cctcaacgtccgccactgggaccgcatcgt	Protospacer
*..*   *********  ************

202. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 7, identity: 0.767

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
cctcaacgtccgccactgggaccgcatcgt	Protospacer
*..*   *********  ************

203. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
cctgcccgtccgccacgcgcaccgcctcgt	Protospacer
*.. .* ************ ***** ****

204. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 8, identity: 0.733

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
acgctgccgccgccacacgccgcgagcgtc	Protospacer
 ************** ******.**.  . 

205. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 8, identity: 0.733

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
gtcttgccgccgccaaacgctgtgagtgcg	Protospacer
 . .****************.****.  **

206. spacer 9.58|2116444|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018080 (Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.771

-gcgtacatggcgagctgcgcgccggtggaatgcgg	CRISPR spacer
tgcgc-cgccgcgacctgcgcgccggtggaaagcgc	Protospacer
 ***. *.. **** **************** *** 

207. spacer 10.14|2853399|41|NZ_AP022575|CRT matches to KC736071 (Mycobacterium phage WIVsmall, complete genome) position: , mismatch: 8, identity: 0.805

tggttcagcgctccgccgccgttgccgccgttgccggcgtt	CRISPR spacer
ttggtcgggctgccgccgccgttgccgccgttgccgccgtt	Protospacer
* * **.*  . ************************ ****

208. spacer 11.1|3049031|31|NZ_AP022575|CRISPRCasFinder matches to NZ_CP012575 (Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence) position: , mismatch: 8, identity: 0.742

gaccagctgaaacgcgaagaacgcgttgtcg	CRISPR spacer
aacctgctgaaacgcgacgaacgcctaggta	Protospacer
.*** ************ ****** * * ..

209. spacer 11.1|3049031|31|NZ_AP022575|CRISPRCasFinder matches to CP048046 (Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence) position: , mismatch: 8, identity: 0.742

gaccagctgaaacgcgaagaacgcgttgtcg	CRISPR spacer
aacctgctgaaacgcgacgaacgcctaggta	Protospacer
.*** ************ ****** * * ..

210. spacer 11.1|3049031|31|NZ_AP022575|CRISPRCasFinder matches to NZ_CP048050 (Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence) position: , mismatch: 8, identity: 0.742

gaccagctgaaacgcgaagaacgcgttgtcg	CRISPR spacer
aacctgctgaaacgcgacgaacgcctaggta	Protospacer
.*** ************ ****** * * ..

211. spacer 11.1|3049031|31|NZ_AP022575|CRISPRCasFinder matches to NZ_CP048048 (Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence) position: , mismatch: 8, identity: 0.742

gaccagctgaaacgcgaagaacgcgttgtcg	CRISPR spacer
aacctgctgaaacgcgacgaacgcctaggta	Protospacer
.*** ************ ****** * * ..

212. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to NZ_CP041652 (Streptomyces sp. RLB1-9 plasmid pRLB1-9.2, complete sequence) position: , mismatch: 8, identity: 0.733

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
gctcaacgtccgccactgggaccgcatcgt	Protospacer
 ..*   *********  ************

213. spacer 1.5|64300|30|NZ_AP022575|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 9, identity: 0.7

tcgctgccgccgccaaacgccgtgaagccg	CRISPR spacer
ataacaacgccgccaatcgccgggaagccg	Protospacer
 .. .. ********* ***** *******

214. spacer 2.2|65052|32|NZ_AP022575|PILER-CR matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccctgcaggacacctgcctggccattttg	CRISPR spacer
agaccctgctggacgcctgcctggccaccggc	Protospacer
. ******* ****.************..   

215. spacer 2.2|65052|32|NZ_AP022575|PILER-CR matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccctgcaggacacctgcctggccattttg	CRISPR spacer
agaccctgctggacgcctgcctggccaccggc	Protospacer
. ******* ****.************..   

216. spacer 2.2|65052|32|NZ_AP022575|PILER-CR matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccctgcaggacacctgcctggccattttg	CRISPR spacer
agaccctgctggacgcctgcctggccaccggc	Protospacer
. ******* ****.************..   

217. spacer 2.2|65052|32|NZ_AP022575|PILER-CR matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccctgcaggacacctgcctggccattttg	CRISPR spacer
agaccctgctggacgcctgcctggcgaccggg	Protospacer
. ******* ****.********** *..  *

218. spacer 8.1|2108513|35|NZ_AP022575|PILER-CR,CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.743

aagcgaactcgccgccgcggcaatggat----tcggaga	CRISPR spacer
cgacgaactcgccgccgcggcaccggatggcgtcg----	Protospacer
 ..******************* .****    ***    

219. spacer 9.65|2116948|36|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to JQ807255 (Environmental Halophage eHP-36, partial genome) position: , mismatch: 9, identity: 0.75

cgttacatgcttcatcatcgatcacgcctttcccat	CRISPR spacer
cagcgactcgttcatcatcgatcacgcctgtcccat	Protospacer
*. ..  *  ******************* ******

220. spacer 9.67|2117092|37|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025961 (Rhodococcus qingshengii strain djl-6-2 plasmid pDJL2, complete sequence) position: , mismatch: 9, identity: 0.757

ctggcgctaacttggctggcgctagcctggtcagtgc	CRISPR spacer
tcggcgcgaacttggctggcgctaacctaaccggcgc	Protospacer
..***** ****************.***...*.*.**

221. spacer 10.5|2852913|35|NZ_AP022575|CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 9, identity: 0.743

aaccccttggtggcgttgccgccggcgccggcgtt	CRISPR spacer
aactggcgggtggcgttgccgccgctgccggcgcg	Protospacer
***.  . **************** .*******. 

222. spacer 13.1|3421529|33|NZ_AP022575|CRISPRCasFinder matches to NZ_CP013345 (Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ggcaaggcggtcgtcgtcttccgaacccccgac	CRISPR spacer
ggcaaggcggtcgtcggcttcggaatagcgcgg	Protospacer
**************** **** ***.  *  . 

223. spacer 5.4|413492|38|NZ_AP022575|CRT matches to NZ_CP054606 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.737

tgacaccagcggcggtgacactggcggcggtgacacca	CRISPR spacer
ccgtgcctgcggcggtgacgctggcggcggtgaccgaa	Protospacer
. ...** ***********.**************   *

224. spacer 9.24|2113972|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to MG592662 (Vibrio phage 2.058.O._10N.286.46.B8, partial genome) position: , mismatch: 10, identity: 0.714

tatcatacattcgctgaaactcgtggagcctgcgc	CRISPR spacer
agtcgcggcttcgctgaaactcgtgaaggctgcgg	Protospacer
 .**...  ****************.** ***** 

225. spacer 9.24|2113972|35|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to MG592672 (Vibrio phage 3.058.O._10N.286.46.B8, partial genome) position: , mismatch: 10, identity: 0.714

tatcatacattcgctgaaactcgtggagcctgcgc	CRISPR spacer
agtcgcggcttcgctgaaactcgtgaaggctgcgg	Protospacer
 .**...  ****************.** ***** 

226. spacer 9.60|2116587|34|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 10, identity: 0.706

atgcgaccgacatttccggcactgtcaccgacga	CRISPR spacer
cttattccgatatttcaggcactgtcaccgtcag	Protospacer
 *    ****.***** ************* *..

227. spacer 10.5|2852913|35|NZ_AP022575|CRT matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 10, identity: 0.714

aaccccttggtggcgttgccgccggcgccggcgtt	CRISPR spacer
gcgcgcccggtgtcgttgccgcccgcgccggcgcg	Protospacer
.  * *..**** ********** *********. 

228. spacer 10.5|2852913|35|NZ_AP022575|CRT matches to NC_019407 (Caulobacter phage CcrMagneto, complete genome) position: , mismatch: 10, identity: 0.714

aaccccttggtggcgttgccgccggcgccggcgtt	CRISPR spacer
aagttgagcgtggcgtagccgccggcgccgccgta	Protospacer
** ..    ******* ************* *** 

229. spacer 13.1|3421529|33|NZ_AP022575|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.697

ggcaaggcggtcgtcgtcttccgaacccccgac	CRISPR spacer
ttgacggcggtcgtcgtcttgccaaccccgcct	Protospacer
   * *************** * ******   .

230. spacer 15.1|3501604|30|NZ_AP022575|CRISPRCasFinder matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.667

ctcctcggtccgccacgcggaccgcatcgt	CRISPR spacer
tcatcacctccgccacgccgaccgcatcga	Protospacer
.. ..   ********** ********** 

231. spacer 9.60|2116587|34|NZ_AP022575|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010630 (Phaeobacter inhibens strain P78 plasmid pP78_a, complete sequence) position: , mismatch: 11, identity: 0.676

atgcgaccgacatttccggcactgtcaccgacga	CRISPR spacer
tgccgcccgtcatttccggcactgtcagcttgtt	Protospacer
   ** *** ***************** *     

232. spacer 10.14|2853399|41|NZ_AP022575|CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 11, identity: 0.732

tggttcagcgctccgccgccgttgccgccgttgccggcgtt	CRISPR spacer
ccgttgccattgccgccgccgttgccgccattgccgccgtt	Protospacer
. ***     . *****************.****** ****

233. spacer 10.5|2852913|35|NZ_AP022575|CRT matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 12, identity: 0.657

aaccccttggtggcgttgccgccggcgccggcgtt---	CRISPR spacer
---cccttgatggtgtcgttgccgccggcggcggccga	Protospacer
   ******.***.**.*..**** ** ***** .   

234. spacer 10.5|2852913|35|NZ_AP022575|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 20, identity: 0.429

aaccccttggtggcgttgccgccggcgccggcgtt-----------------	CRISPR spacer
-----------------accgccggcgccggcgggaaccccacctcaagtgg	Protospacer
                 .***************