CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP022576	Mycobacterium florentinum strain JCM 14740	4 crisprs	cas4,WYL,csa3,cas3,DinG,DEDDh	1	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022576_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022576_1

2238288-2238371

Unclear

Consensus_repeat	Method
AGCCGGGCGACGATGCGCGTCGTCACGA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_AP022576_1

>merge|NZ_AP022576|1|2238288-2238371|CRISPRCasFinder
AGCCGGGCGACGATGCGCGTCGTCACGACGCGCTGGGGAGCCCCGCAATCCAGCTCAGCCGGACGACGATGCGCGTCGTCACGA

>NZ_AP022576|1|1|2238288-2238371|CRISPRCasFinder
AGCCGGGCGACGATGCGCGTCGTCACGA	CGCGCTGGGGAGCCCCGCAATCCAGCTC
AGCCGGACGACGATGCGCGTCGTCACGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022576.1\|WP_085220113.1\|2246585_2247386_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
NZ_AP022576.1\|WP_085223080.1\|2225670_2225925_+\|mycoredoxin-Mrx1	unknown	unknown	gnl\|CDD\|131255
NZ_AP022576.1\|WP_085220085.1\|2241639_2241909_-\|DUF3107-domain-containing-protein	unknown	unknown	gnl\|CDD\|378634
NZ_AP022576.1\|WP_085220087.1\|2238383_2239577_-\|adenylyltransferase/sulfurtransferase-MoeZ	unknown	unknown	gnl\|CDD\|181156
NZ_AP022576.1\|WP_163667730.1\|2236431_2237424_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_AP022576.1\|WP_085223088.1\|2232025_2235130_-\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_AP022576.1\|WP_085220081.1\|2247461_2248058_+\|acid-phosphatase	unknown	unknown	gnl\|CDD\|139587
NZ_AP022576.1\|WP_085223082.1\|2225949_2226612_+\|sensor-domain-containing-protein	unknown	unknown	gnl\|CDD\|372884
NZ_AP022576.1\|WP_085223086.1\|2228699_2232029_-\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_AP022576.1\|WP_085223092.1\|2235999_2236305_+\|MGMT-family-protein	unknown	unknown	gnl\|CDD\|226219
NZ_AP022576.1\|WP_085220088.1\|2237420_2238275_-\|TIGR02569-family-protein	unknown	unknown	gnl\|CDD\|131620
NZ_AP022576.1\|WP_085223084.1\|2226616_2227540_-\|NAD(+)-diphosphatase	unknown	unknown	gnl\|CDD\|234699
NZ_AP022576.1\|WP_085220115.1\|2240966_2241653_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_AP022576.1\|WP_085223090.1\|2235210_2235996_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_AP022576.1\|WP_085220083.1\|2243830_2245336_+\|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|223587
NZ_AP022576.1\|WP_085220082.1\|2245350_2246571_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274511
NZ_AP022576.1\|WP_085223095.1\|2227539_2228610_-\|potassium-channel-protein	unknown	unknown	gnl\|CDD\|367001
NZ_AP022576.1\|WP_085220084.1\|2242882_2243578_-\|hydroxylase	unknown	unknown	gnl\|CDD\|205967
NZ_AP022576.1\|WP_163667732.1\|2239750_2240608_-\|DUF3152-domain-containing-protein	unknown	unknown	gnl\|CDD\|371483
NZ_AP022576.1\|WP_169718474.1\|2242036_2242879_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021

Protein	Function_ID	Function_description	E-value
NZ_AP022576.1\|WP_085220113.1\|2246585_2247386_-\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.76318e-75
NZ_AP022576.1\|WP_085223080.1\|2225670_2225925_+\|mycoredoxin-Mrx1	gnl\|CDD\|131255	TIGR02200, conserved_hypothetical_protein, Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.	3.38197e-40
NZ_AP022576.1\|WP_085220085.1\|2241639_2241909_-\|DUF3107-domain-containing-protein	gnl\|CDD\|378634	pfam11305, DUF3107, Protein of unknown function (DUF3107). Some members in this family of proteins are annotated as ATP-binding proteins however this cannot be confirmed. Currently no function is known.	1.37294e-33
NZ_AP022576.1\|WP_085220087.1\|2238383_2239577_-\|adenylyltransferase/sulfurtransferase-MoeZ	gnl\|CDD\|181156	PRK07878, PRK07878, molybdopterin biosynthesis-like protein MoeZ; Validated.	0
NZ_AP022576.1\|WP_163667730.1\|2236431_2237424_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.36917e-25
NZ_AP022576.1\|WP_085223088.1\|2232025_2235130_-\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.08296e-75
NZ_AP022576.1\|WP_085220081.1\|2247461_2248058_+\|acid-phosphatase	gnl\|CDD\|139587	PRK13462, PRK13462, acid phosphatase; Provisional.	3.38599e-122
NZ_AP022576.1\|WP_085223082.1\|2225949_2226612_+\|sensor-domain-containing-protein	gnl\|CDD\|372884	pfam14032, PknH_C, PknH-like extracellular domain. This domain is functionally uncharacterized. It is found as the periplasmic domain of the bacterial protein kinase PknH. The domain is also found in isolation in numerous proteins, for example the lipoproteins lpqQ, lprH, lppH and lpqA from M. tuberculosis. This family of proteins is found in bacteria. Proteins in this family are typically between 214 and 268 amino acids in length. There are two completely conserved C residues that are likely to form a disulphide bond. A second pair of cysteines are less well conserved probably form a second disulphide bond. It seems likely that this domain functions to bind some as yet unknown ligand.	4.59033e-11
NZ_AP022576.1\|WP_085223086.1\|2228699_2232029_-\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	3.2389e-106
NZ_AP022576.1\|WP_085223092.1\|2235999_2236305_+\|MGMT-family-protein	gnl\|CDD\|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	2.64309e-29
NZ_AP022576.1\|WP_085220088.1\|2237420_2238275_-\|TIGR02569-family-protein	gnl\|CDD\|131620	TIGR02569, conserved_hypothetical_protein, TIGR02569 family protein. This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown. [Hypothetical proteins, Conserved].	1.15844e-136
NZ_AP022576.1\|WP_085223084.1\|2226616_2227540_-\|NAD(+)-diphosphatase	gnl\|CDD\|234699	PRK00241, nudC, NAD(+) diphosphatase.	1.56741e-124
NZ_AP022576.1\|WP_085220115.1\|2240966_2241653_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.31382e-19
NZ_AP022576.1\|WP_085223090.1\|2235210_2235996_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.10859e-19
NZ_AP022576.1\|WP_085220083.1\|2243830_2245336_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.77837e-154
NZ_AP022576.1\|WP_085220082.1\|2245350_2246571_+\|hypothetical-protein	gnl\|CDD\|274511	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking].	0.00901347
NZ_AP022576.1\|WP_085223095.1\|2227539_2228610_-\|potassium-channel-protein	gnl\|CDD\|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	1.94445e-23
NZ_AP022576.1\|WP_085220084.1\|2242882_2243578_-\|hydroxylase	gnl\|CDD\|205967	pfam13794, MiaE_2, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like.	1.40974e-52
NZ_AP022576.1\|WP_163667732.1\|2239750_2240608_-\|DUF3152-domain-containing-protein	gnl\|CDD\|371483	pfam11350, DUF3152, Protein of unknown function (DUF3152). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	3.17526e-130
NZ_AP022576.1\|WP_169718474.1\|2242036_2242879_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	3.99951e-07

>NZ_AP022576.1|WP_085220088.1|2237420_2238275_-|TIGR02569-family-protein
MNVEPPPEHVLSAFGLAGVKPIALGASWEGGWRCGEVVLSTVADHARAAWSARVRETLFVDGVRLARPVRSTDGRYVVSGWRADTFVAGTPEPRHDEVVSAAVRLHEATGKLERPRFLTQGPTTPWADVDVFIAADRSAWEERPLQSIPPGARTAPPSADAERSVELITQLATLRKPTKSPNQLVHGDLYGTVLFVGTAAPGITDITPYWRPASWAAGVVVVDALSWGEADDGLIERWNALPEWPQMLLRALMFRLAVHALHPRSTAEAFPGLARTAALIRLVL
>NZ_AP022576.1|WP_163667730.1|2236431_2237424_+|IS481-family-transposase
MVHANAVLTPRGRLLLARRIVDEGWPIARAAEHFRVSWPTAKRWASRYVAMGVVGMGDRSSRPHHCPSRTPEVVVRRIVALRWRHRLSPLAIASRLSMPASTVHAVLVRCRLNRLSHIDIRTGERIRRYEHEHPGSLIHVDVKKLGNIPVGGGWRFVGRAQGSKNRAATPGIRRSRNRDELLGHAFVHTVVDDHSRAAYAEIHDDETADTAIAVLRRAVSWFRARGVVVERVISDNGSCYKSKAWRHACSELGVKPKHTRPYRPQTNGKAERFHRTMAAEWAFSRHYHSEAQRRSALAPWLHTYNHHRQHSAIGKVPPITRLTNLPGQYT
>NZ_AP022576.1|WP_085223092.1|2235999_2236305_+|MGMT-family-protein
MAPVTEEQVERVRALVAAIPSGRVCTYGDIAAVAGLSSPRIVGWIMRTDSSDLPWHRVITASGRPARHLTTRQLELLRAEGVLAVDGRVALDEVRYEFPPD
>NZ_AP022576.1|WP_085223090.1|2235210_2235996_+|alpha/beta-hydrolase
MTTDLHVHRFGPSGPVQLLALHGLTGHGQRWQQLGEYLPEITIAAPDLLGHGRSSWAAPWTIDANVAALAALLDEVAQAPVLVVGHSFGGGLAMNLAATRPDLVAALLLLDPAVGLDGGWTSRIAEAMFSSPDYPDPAEARMEKATGSWVDVDPAVLDAELDEHLVRLPSGRYGWRVSLPAMMSYWSELARPTVLPPAGTPTTLVRAAWTSPPYVTDQLVTGLRERLGSDFELLTYECNHMVPGAKPTEVAALIRKQLGAR
>NZ_AP022576.1|WP_085223088.1|2232025_2235130_-|ATP-dependent-helicase
MSLTWGAEAGAVLAPDARGSVRILGGPGTGKTSLLVDAAVAAVDRGIDPESVLLLTGSGRIGMRQRSALTMALLRATGPGTSAIREPVVRTVHSYAYAVLRRAAERAGDAPPRLVTSAEQDAIIRELLAGDLEEAGTCAWPAHLWPALSTAGFATELRNLLARCAERGVDPQELQRLGRRSRRPEWTAAGRFAQQYEQVMLLRAAVGTATTPALGAAELVGAALEAFAVDAELLAAERARIRVLLVDDAQQLDPQAARLVRVLAAGSELALVAGDPNQAVFGFRGGEPAGLLDGEAPSVTLTRSHRCAPAVARAVTGIARRLPGSSDGRAIEGTGAEEGSVSVRLAASAHAEAAMIADALRRAHLVDNVPWSQMAVIVRSVPRAGARLPRALAAAGVPVAASAVSGSLTEGPAVRAMLTVLAATAEGLDGDRALALLTGPIGRVDPVSLRQLRRTLTRGKPADVAGDFGDVLVAALGAGAPTSGSRPLQRIRGVLDAAARCHRDGQDPRYTLWAAWHRSGLQRRWLAASERGGSAATQATRDLEAVTALFDVTDQYVSRTPGASLRGLLEHVAALQLPGVKTEPASTTEQVQVLSAHAALGHEWDVLVIAGLQDGLWPNTVPRGGVLATQRLLDVMDGVGADASVRAPLLAEERRLLVAAMGRARRRLLVTAVDSDSDGADGGAALPSPFFFEVAQWADEDANSPGVQPISAPRVLSTAALVGRLRGVVCAPDGAVDDAARHCAATQLARLAAAGVPGADPSGWHGLTAVSTSDPLRDGRDPVTLTPSTLQTLNDCPLRWLVERHGGTNPRELRSTIGSVLHALIAEPGKTETQLLAELERAWEHLPFDARWHSANELTRHRAMIEAFVEWRAQTRSELREVGVEVDVDGVLGTPRADGGEVRLRGRVDRLERDGSGRLVIVDIKTGKTPVTKDDAQQHAQLAMYQLAVAEGLVPDGDEPGGARLVYIAKSGAAGATVREQDPLTPAARDEWRDLVTRAADATAGPQFVARRNDGCSHCPVRPSCPAYGEGSAS
>NZ_AP022576.1|WP_085223086.1|2228699_2232029_-|ATP-dependent-helicase
MTPRYSPDELASALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGTAGTVTLESAGAPAVSTYHAFAGSLLRDYGLLLSIEPDTRLLSETELWQLAFDVVNGYGGQLSTDKTPAAVTSMVLRLWGQLTEHLVDTGQLRDTHLELERLVHALPAGPYQRDRGPSQWLLRLLAAQTERTELVPLLDALQERMRSAKVMDFGVQMASAARLAANFPQVGEDLRNRYRVVLLDEYQDTGHAQRIALSALFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPQSDGTPAPVLELRTSWRNPPSTLHIANAISAEARRRSVAVHALRPRPDAPPGTVRAALLADAQAEREWIADHLHEHYQRSRDDGVSPPTAAVLVRRNADAAPVAEALRARGIPVEVVGLAGLLSIPEVAELVAMLRLVADPTAGAAAMRVLTGPRWRLGGRDIAALWQRAATLGAGRPADASSAQSIAMAAGPSGLGADTACLADAIGDPGAANSYSVTGYQRITALAAELSALRGHLGHSLPDLVAEVRRTLGLDCEVRAAAGHGGWAGAEHLDAFADVVAGYAERTTATDASAAASVLGLLAYLDAAEVVENGLAPAPLTVARDRVQVLTVHSAKGLEWEVVAVAHLSGGIFPSTASRSSWLTDAAELPPLLRGDRASAGALGIPVLDLSDVTNRKQLSDEISEHRRQLEQRRVDEERRLLYVGITRAEDTLLVSGHHWGPTGIKPRGPSDFLCELKDVIDRSVAEGNPCGVVEQWAPAPAEGDRNPLRDSAIEAVWPADPLARRRPDVERGAALVAGAMAAGATQDCVDVEVDVDGWAADVDALLAERARAERRVVRALPSQLSVSGLVDLARDPEGAVQRLVHRLPTRPDPHALLGNAFHSWVQQFYGTEWLFELGDLPGAADSDVGHTGELAVLQQAFTRSQWAARTPIAVEVPFEMPIGDTVVRGRIDAVFAEPDGGATVVDWKTGEPPRGAEAMRQAAVQLAVYRLAWAALSGCPESSVRTAFHYVRTGVTVVPDELPDLTELAGLAPASGRYPQPDAAGERGVAV
>NZ_AP022576.1|WP_085223095.1|2227539_2228610_-|potassium-channel-protein
MPKGRLPRLRGLDERLTTQPGHLLVGVLRIPEDHGSPARVITRRLVIALVLLFGAAFVVYLDRNGYRDVRGDRLTFLDCLYFSAVSLSTTGYGDITPYTETARLVNTVVFTPLRIAFLVVLVGTTLEVLSERSRQGWKIQRWRNRVRNHTIVIGYGTKGKRAVAAIASDEAAQGEIVVVDTDRGALEHATTAGLVTVHGDGTKSDVLRLAGAQHASSIIVATSRDDTAVLVTLTAREIAPKAKIVAAIREAENSHLLQQSGADSVVVSSETAGRLLGLATTTPSVVEMIEDLLTPDAGLAIAEREVEASEVGGSPRHLRDIVLGVVRDGHLLRIGAPEVDAIEATDRLLYIKNAGH
>NZ_AP022576.1|WP_085223084.1|2226616_2227540_-|NAD(+)-diphosphatase
MDFQLSSVPLLSRVGADRADQLRTDVEAATVGWAAAALLRVDSRNQVLVANGRVVLGAAAELGEKPPHDAVFLGRIENGQHVWAIRGALQSPEDPDVQTEVLNLRSLGPIFDDTSSQLVSSAVALLNWHDRARFSAVDGSPTKPARAGWSRVNPVTGHEEFPRIDPAVICLVHDGGDRAVLARQAVWPERMFSLLAGFVEAGESFEVCVVREIREEIGLNVSDVRYLGSQPWPFPRSLMVGFHALGDPDEEFAFNDGEIAEAAWFTRDEVRAALAVGDWSSSSESKLLLPGSISIARVIIESWAELD
>NZ_AP022576.1|WP_085223082.1|2225949_2226612_+|sensor-domain-containing-protein
MAPNLRSRQNSPIRKFSAAAMGCAAVMLMSACSHSSTPAKSHPTVTHVDDMIVGLDDVRRIAKADDLARAEADLNKPAPSDANAPGPCRVVGHNDLTFGSNWTEFRAAGFHGVTDDIQPLGRAMINGVTQAAGRYANPDAAQGAFHQLESSLQACVALQDPNYSFTLDRPDPSTLKLSADQWSHLYRTKSAYLVSVGVVGLESADQIANSVLQIITDRIG
>NZ_AP022576.1|WP_085223080.1|2225670_2225925_+|mycoredoxin-Mrx1
MSNAPITVYTTSWCGYCHRLMTVLKSNGIPYETVDIEDDPAAAEFVGSVNGGNRTVPTVKFADGSTLTNPSAAEVKAKLAQVAG
>NZ_AP022576.1|WP_085220087.1|2238383_2239577_-|adenylyltransferase/sulfurtransferase-MoeZ
MSTSLPPLVEPAGELSRHEVARYSRHLIIPDIGVDGQKRLKNARVLVIGAGGLGAPALLYLAAAGVGTIGIVDFDVVDESNLQRQIIHGVADVGRAKAQSARDSIHAINPLVEVRLHEFRLEASNAVDLFGQYDLIVDGTDNFATRYLVNDAAVLAGKPYIWGSIYRFEGQVSVFWEDAPADEAGNERGLNYRDLYPEPPPPGMVPSCAEGGVLGIICASIASVMGTEAIKLITGIGEPLLGRLMIYDALEMSYRTIKIRKDPATPKITELIDYEAFCGAVSEGAAQAATGSTITPRELRALLDSGKKLALIDVREPVEWDINHIDGAQLIPKSLISSGEGLAKLPHDRKAVLYCKTGVRSAEALAAVKKAGFADAVHLQGGIVAWAQQMQPDMVMY
>NZ_AP022576.1|WP_163667732.1|2239750_2240608_-|DUF3152-domain-containing-protein
MSTYGWRAYALPVLVALTAVVLYQTVTGVGAPQPTASKPAIQGPPAIGAVGTAILDAPPRGLATFDANLPAGTLPDGGPFTEAGDKTWSVVPGTTPQIGQGTAKVFRYTVEVENGLDPAMFGGEDAFATMVDQTLANPKGWTHNPQFAFVRIDNGKPDFRISLVSPVTVREGCGYEFRLETSCYNPVYGPNREARVFINEARWVRGAVPFEGDVGSYRQYVIDHEVGHAIGYVRHEPCDKQGGLAPVMMQQTFSTSNDDAAKFDPEYVKADGKTCRFNPWPYPIA
>NZ_AP022576.1|WP_085220115.1|2240966_2241653_+|TetR/AcrR-family-transcriptional-regulator
MSDLAKSAARRAVRTGDRGRPSDGIATSNRRGNRLPRDERRGQLLIVASDVFVDHGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLDRHVENLVSGVQNALSTTTDNRQRLRAAIQAFFDFIEHDSQGYRLIFENDFVTEPEVATQVRAATESCIDAVFALISADSGLDPHRARMIAVGLVGISVDCARYWLDSDRPISKSDAVDGTVAFAWGGLSHVPLTRS
>NZ_AP022576.1|WP_085220085.1|2241639_2241909_-|DUF3107-domain-containing-protein
MEVKVGITDSPRELVFASAQTPAEVEDAVSAALREGSGLLGLTDEKGRRFLIHTAKIAYVEIGAADGRRVGFGIGADAGAKTGKAAKSE
>NZ_AP022576.1|WP_169718474.1|2242036_2242879_+|hypothetical-protein
MTIGSQLGQGGARRPFLYLHVRNIGIIRNTLDDRNGLACGPGHDYPDDDYDGADYDGYDDDEYADDEDHEEYEEYDELKELLWPIGGMRPAVAVLGAVVAIGAIATAVIINSGDSASTKATIAPPAPTTVSAAPRTTSPPSASQRPAPSTSRAPQLPPETVTTLAPPSAALTTPPLAVPPPAVVSPRATVNPSTIYYSVTGTKTLLDLVNVVYTDARGYPQTEFNVSLPWTKVVVLNPGVTTQSVVATSIVGKLNCAIVNALGQVEVASANNANLATCTK
>NZ_AP022576.1|WP_085220084.1|2242882_2243578_-|hydroxylase
MTSASSADRVDDSPSVGLTAEHPGVNELFAVLAYGEVAAFYRLTDEARMAPDLRGRISMASMAAAEMKHYELLHDALEKRGVDVVSAMSRYVSAIENYHRLTMPSTWLEALVKTYVGDALAADLYLEIAGGLPDEVADVVRAALSETGHSQFVVAEVRAAVTASGKQRSRLALWARRLYGEAITQAQYLLADHDELVDLVLSGAGGLGQLGAFFERLQQTHDRRMRELGLS
>NZ_AP022576.1|WP_085220083.1|2243830_2245336_+|DEAD/DEAH-box-helicase
MTALTSKTEPTFAALGVREEIVRALAEKGIEHAFAIQELTLPMALAGDDVIGQARTGMGKTLAFGVPLLQRITNGVGARPLNGTPRALIVVPTRELCLQVTEDLAAAAKHLTADEGRRLSVVSIYGGRAYEPQIDALRTGADVVVGTPGRLLDLSQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVQPTHIRAEAPHSAATHDTTEQFVFRAHALDKVEMVSRILQADGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQIAREKALKAFRNGDVDVLVATDVAARGIDIDDITHVINYQIPEDEQAYVHRIGRTGRAGKTGIAVTLVDWDELPRWTAIDKALNLGSPDPAETYSNSPHLYTELGIPTEATGTVGTPRKSPVKRRETDRGAPAEKPARARPANRRRRTRGGQPVSGHPAGNGSDGESAAESPSDSASGNGTNGNANRRRRRRRKPAEATTHAN
>NZ_AP022576.1|WP_085220082.1|2245350_2246571_+|hypothetical-protein
MVKPERRTKGDLLAAAAIAVVVAATASLIWWTSDARATISRPAATPAPNPTLAKQVPASLKQLWTAPSAATTAPVIVGGTVATGDGRQVDGRDAGTGQTRWSYSRDADLCGLSWVYHYAVAVYRDDRGCGQVSTVDGSTGRRGAARSSYADPQVHLSSDGTTVLSAGNTRLELWRSDMVRMLAYGETDARVKPSSRGLHSGCKLYSAAASSLQVSVLEKCANQADLRLALLRPGKEDDEPSQHLVSEPGIGVNSGARVLTVWQSNTAVYLPGTAGAQPRVDVIDEMGTTVASALLPKPPSNSAVSQAGNLMTWWTGDSVLVFDASSLNLRYTIAAGDTTVPLGPGTMMAGKLLIPVTGAIGVYDPMTGANERYIPVDRAPSNRAVVPAVSGSRVFEQRGDTVVALG
>NZ_AP022576.1|WP_085220113.1|2246585_2247386_-|ParA-family-protein
MSEARILAVANQKGGVAKTTTVASLGAAMVEKGRRVLLVDLDPQGCLTFSLGQDPDKLPASVHEVLLGEIEPSAALVTTMEGMTLLPANIDLAGAEAMLLMRAGREYALKRALAKVADQFDVVIIDCPPSLGVLTLNGLTAADEVIVPLQCETLAHRGVGQFLRTVADVQQITNPKLRLLGALPTLYDSRTTHTRDVLLDVADRYDLPVLAPPIPRTVRFAEASASGSSVMSGRKNKGAVAYSTLAQALIKHWKSGKPLPTFAVEA
>NZ_AP022576.1|WP_085220081.1|2247461_2248058_+|acid-phosphatase
MGLHNHRLVLLRHGETEWSKSGQHTGRTDIDLTENGRTQAKLSGTVLSGLGLDNPLVISSPRTRARVTADLAGLTVDEVSPLLAEWDYGEYEGVTTETIRETVPDWLVWTHGCPGGESVAQVSDRADAAIALAYQYMESRDVVFVSHGHFSRAVITRWVELPLIEGRRFGMRTASVAMCGFEHGAQQLLALGLTGQTV

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Crispr_ID: NZ_AP022576_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022576_2

3097106-3097226

Orphan

Consensus_repeat	Method
CCCGGCCACGGCGCTCCCGGCAGCGGACCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022576_2

>merge|NZ_AP022576|2|3097106-3097226|CRISPRCasFinder
CCCGGCCACGGCGCTCCCGGCAGCGGACCAACCAGCGGCGGTGACAGTCCGAGCAGCGGCCCACCCGCGGGAGGCGGACCCGTTACCGGTCCCGGCCACGACGCTCCCGGCAGCGGACCAA

>NZ_AP022576|2|2|3097106-3097226|CRISPRCasFinder
CCCGGCCACGGCGCTCCCGGCAGCGGACCAA	CCAGCGGCGGTGACAGTCCGAGCAGCGGCCCACCCGCGGGAGGCGGACCCGTTACCGGT
CCCGGCCACGACGCTCCCGGCAGCGGACCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022576.1\|WP_085222606.1\|3086164_3087031_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl\|CDD\|130274
NZ_AP022576.1\|WP_085222596.1\|3099728_3100370_-\|trypsin	unknown	unknown	unknown
NZ_AP022576.1\|WP_085223014.1\|3102318_3103131_-\|carotenoid-biosynthesis-protein	unknown	unknown	gnl\|CDD\|367884
NZ_AP022576.1\|WP_085222590.1\|3106466_3107957_-\|bifunctional-phosphatase-PAP2/diacylglycerol-kinase-family-protein	unknown	unknown	gnl\|CDD\|224513
NZ_AP022576.1\|WP_085222602.1\|3089668_3091198_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237865
NZ_AP022576.1\|WP_085222593.1\|3103316_3104087_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_AP022576.1\|WP_085222600.1\|3093591_3094164_-\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|234753
NZ_AP022576.1\|WP_169718501.1\|3108179_3108782_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022576.1\|WP_085223015.1\|3084942_3086214_+\|YibE/F-family-protein	unknown	unknown	gnl\|CDD\|377940
NZ_AP022576.1\|WP_085222605.1\|3087048_3087414_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_AP022576.1\|WP_085222599.1\|3094198_3094789_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022576.1\|WP_085222603.1\|3088251_3089577_-\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223936
NZ_AP022576.1\|WP_085222594.1\|3101588_3102131_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184918
NZ_AP022576.1\|WP_085222598.1\|3095077_3095452_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022576.1\|WP_163667344.1\|3091367_3093482_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_AP022576.1\|WP_085222597.1\|3097816_3098620_+\|mycofactocin-coupled-SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|274889
NZ_AP022576.1\|WP_085222604.1\|3087466_3088222_-\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	unknown	unknown	gnl\|CDD\|274422
NZ_AP022576.1\|WP_085222591.1\|3105739_3106465_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_AP022576.1\|WP_085222595.1\|3100541_3101396_+\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|224294
NZ_AP022576.1\|WP_085222592.1\|3104110_3105637_-\|GMC-family-oxidoreductase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|235000

Protein	Function_ID	Function_description	E-value
NZ_AP022576.1\|WP_085222606.1\|3086164_3087031_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl\|CDD\|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NZ_AP022576.1\|WP_085223014.1\|3102318_3103131_-\|carotenoid-biosynthesis-protein	gnl\|CDD\|367884	pfam04240, Caroten_synth, Carotenoid biosynthesis protein. The representative member of this family is CruF, a C50 carotenoid 2',3'-hydratase involved in the synthesis of the C50 carotenoid bacterioruberin in the halophilic archaeon Haloarcula japonica.	7.62526e-13
NZ_AP022576.1\|WP_085222590.1\|3106466_3107957_-\|bifunctional-phosphatase-PAP2/diacylglycerol-kinase-family-protein	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	5.99857e-36
NZ_AP022576.1\|WP_085222602.1\|3089668_3091198_-\|hypothetical-protein	gnl\|CDD\|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	1.53632e-12
NZ_AP022576.1\|WP_085222593.1\|3103316_3104087_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	2.06979e-08
NZ_AP022576.1\|WP_085222600.1\|3093591_3094164_-\|dCTP-deaminase	gnl\|CDD\|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	1.18339e-94
NZ_AP022576.1\|WP_085223015.1\|3084942_3086214_+\|YibE/F-family-protein	gnl\|CDD\|377940	pfam07907, YibE_F, YibE/F-like protein. The sequences featured in this family are similar to two proteins expressed by Lactococcus lactis, YibE and YibF. Most of the members of this family are annotated as being putative membrane proteins, and in fact the sequences contain a high proportion of hydrophobic residues.	7.5912e-80
NZ_AP022576.1\|WP_085222605.1\|3087048_3087414_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	2.94039e-06
NZ_AP022576.1\|WP_085222603.1\|3088251_3089577_-\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl\|CDD\|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NZ_AP022576.1\|WP_085222594.1\|3101588_3102131_-\|hypothetical-protein	gnl\|CDD\|184918	PRK14954, PRK14954, DNA polymerase III subunits gamma and tau; Provisional.	4.59079e-07
NZ_AP022576.1\|WP_085222604.1\|3087466_3088222_-\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	gnl\|CDD\|274422	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083. This protein family pulls together several groups of proteins, each very different from the others. They share in common three conserved regions. The first is a region of about 38 amino acids, nearly always at the N-terminus of a protein. This region has a bulky hydrophobic residue, usually Trp, at position 29, and a His residue at position 37 that is invariant, so far, in over 150 instances. The second conserved region has a motif [DE]xxxHxxD. The third conserved region contains a hydrophobic patch and a well-conserved Arg residue. Most examples are found in the Actinobacteria, including the genera Mycobacterium, Corynebacterium, Streptomyces, Nocardia, Frankia, etc. The pattern of near-invariant residues against a backdrop of extreme sequence divergence suggests enzymatic activity and conservation of active site residues.	3.91312e-20
NZ_AP022576.1\|WP_085222597.1\|3097816_3098620_+\|mycofactocin-coupled-SDR-family-oxidoreductase	gnl\|CDD\|274889	TIGR03971, short-chain_dehydrogenase/reductase_SDR, SDR family mycofactocin-dependent oxidoreductase. Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. All members occur in genomes that encode a cassette for the biosynthesis of mycofactocin, a proposed electron carrier of a novel redox pool. Characterized members of this family are described as NDMA-dependent, meaning that a blue aniline dye serving as an artificial electron acceptor is required for members of this family to cycle in vitro, since the bound NAD residue is not exchangeable. See EC 1.1.99.36. [Unknown function, Enzymes of unknown specificity].	5.21567e-119
NZ_AP022576.1\|WP_163667344.1\|3091367_3093482_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.24615e-11
NZ_AP022576.1\|WP_085222591.1\|3105739_3106465_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	9.98083e-12
NZ_AP022576.1\|WP_085222595.1\|3100541_3101396_+\|L,D-transpeptidase	gnl\|CDD\|224294	COG1376, ErfK, Uncharacterized protein conserved in bacteria [Function unknown].	3.13838e-24
NZ_AP022576.1\|WP_085222592.1\|3104110_3105637_-\|GMC-family-oxidoreductase-N-terminal-domain-containing-protein	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	1.20902e-145

>NZ_AP022576.1|WP_085222598.1|3095077_3095452_-|hypothetical-protein
MKIAAMALAALMVGTSLTASTAQADVTAGPVPAHVYPLQPPPGPVVDPDPLVAVQNFQAHISDLHDNWDTLSPDERNRRLKALQQEAPLVDAETRNLPPGQQLQVEGMLLSATLQLADLLRRMR
>NZ_AP022576.1|WP_085222599.1|3094198_3094789_-|hypothetical-protein
MLAPAAVFFAVSGDVGPFAAPAEAKPVISEPAPSYLEIVAAAPNIPHGAPGLAVPDGQQVASRYHVRSRFLPVGLCSEQGLQVRTILASRAISATFPQIHEIGGVRPDPLPWHPLGLALDVMIPDPGSAQGIALGNAIVAYVLQNSNRFGMQDAIWRGVYYTPNGAQTSRLGHYDHVHITTTGGGYPKGGETYLAD
>NZ_AP022576.1|WP_085222600.1|3093591_3094164_-|dCTP-deaminase
MLLSDRDLRAEISAGRLGIDPFDDTLVQPSSVDVRLDSMFRVFNNTRYTHIDPAKQQDELTSLVEPAAGEPFVLHPGEFVLGSTLEQVALADDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFTGHITLELSNVANLPIILWPGMKIGQLCILRLTSPAEHPYGSSRVGSKYQGQRGPTPSRSYENFIRTT
>NZ_AP022576.1|WP_163667344.1|3091367_3093482_-|hypothetical-protein
MDIVLGVSVAPDSVQMVLVEGENADGALVEEDEFHFAATDLTEPTGVPDRVISAILGTREGAADAGLELSSIGVTWTDQLHAAVLRDALASYKLENVMLVSAFLAAAALGQSVGGAMGYETTAVLFVEPDTATLAVVETSDGSISEFFREQLDPESDEEATAQLTGLIGGLEEMDMPPGGVFVVGSGVNIAAIKPALESATALNVNTPEEPETALARGAALASANAPLFASSTAALAYAQDPGTGAVQPADRPEYLGVSYLSDATLGRDELAYSLVSDEDADAPTVVIDPADFAGPDEIEPRRRPVLLVGSGMAVVAISAVVALEIALAIGIRTTNVAVQPSPNQNLIVPSQPVPAPPPVQASAPKPKFSLPAPAAAPMPLHPALAAPLPAAPAPAAPPPLPVAPPIAPVVPVPAVVPIPAPQIRVPAPEWLMTPPVIQAPPRVLPPPVVVQQPPPVHFPEPPDSVPQSPPHQTPPQTGPTKPNGPGGHPGSGPGGPGDGIPGSGPGGPGSGHVPPPGSGSGGANGGGPGGHPGSGPGGGGHGSGGPFGGGPNGGGPGHGGSAPIGGGPVGGGPIGGGGHGGGPIGGGPIGGGPIGGGGHGAGGPFGGGPSGGPIGGGPIGGGPIGGGSHGGGGPFGGGGRAPSGPIGGGPIGGGGHSGGGLGGGGFGGGGGLGGGGFGGGHSGGAGGFGGGGGGHSGGGGGHH
>NZ_AP022576.1|WP_085222602.1|3089668_3091198_-|hypothetical-protein
MSMAPSVVRMVLVEGENGDGVTVDEDNFDVASDDDAATTSAADQVVSAILGTQEGAAQGGYQLTSTGVTWTDPIEAAALRDALAAHKVENVMLVSAFLAAAALAQAVGNETNYAQTALLFIEPDTATLALVDTADGSIADVHRQPLAEDDETAVAQLASMVSEAETLNTCPGAVFVVGSGVDVPLIKPALEAATTLPLAMPEEPDTALARGAALASAHAPLFASSTAAQAYAQDPGTGAIAPFAIAPGYFDNPDSGDDALAYSAMPDDYADAYTGQHTAATSLADYHERRSFGLVGSVVASIFIVGVAALVVSLAIAIRPTAGVKPVPSHNIVAPATPAPAAPAPAPAAPAPAPVAAPIPAPAPVPQAPAPVQIPDAPAPVPVQVPDAPAPIPDAPAPVPVPAAPAPAPMAPIPVPIPLPIPPIIGVPGGPLGPGGGFPNRGHGGDEFPGNQGPGGGRGEFPGGGGFPGGGHGGGGFPGFPGGGHGGGGFPGGGGHGGFGGGHGGFGRH
>NZ_AP022576.1|WP_085222603.1|3088251_3089577_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MRCTVFGTGYLGATHAVGMAVLGHEVVGVDIDPGKVAKLAAGDIPFYEPGLRELLTDNLAAGRLRFTTDYDLAADFADVHFLGVGTPQKKGEYGADLSHVHAVIDNLVPRLTRPAVLVGKSTVPVGTAAELGERTAALAPAGVDVEIAWNPEFLREGHAVHDTLEPDRIVLGIQQDSVRSEIVIRELYAPILDAGVPFLVTDLQTAELVKVSANAFLATKISFINAVSEVCEAAGADVTLLADALGYDSRIGRKFLNAGLGFGGGCLPKDIRAFMARAGELGANQALTFLREVDSINMRRRTKMVELATAACGGSLLGANIAVLGAAFKPESDDVRDSPALNVAGQLQLNGAAVNVYDPKALENARRLFPTLNYAVSVTEACEGADAVLVLTEWQEFTDLDPDDLADRVRARVVVDGRNCLDAERWTRAGWRVFRLGARRP
>NZ_AP022576.1|WP_085222604.1|3087466_3088222_-|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme
MDYAAAFLDENRAFSELFHEVDDSHPVPTCPGWSLKQLFRHVGRGDRWAAQIVRDRLGEPLDVRSVEAGKPPPDPADAISWLHGGAQRLLDAVEQSGVETPVWTFLGERPANWWIRRRLHETSVHRADAAIALGREFTLEPAVAADGITEFLERIAIQAGSTGEPLPLADDQTLHLHATDPGLGEAGEWTVGVSGTAISWSHEHGKGSAALRGAATELLLAMARRTPLADTGIELFGNEAVWQNWLERTPL
>NZ_AP022576.1|WP_085222605.1|3087048_3087414_-|nuclear-transport-factor-2-family-protein
MTTSEIATVLAWHDALNAADIDTLAALSSDDIEIGDAHGAAQGHEALRTWASSGRATTELGEMYVHDGVVVAELTGDTPDAATNTALAFRVVHDHVTSVFRHQDLASALAATELTRADLVT
>NZ_AP022576.1|WP_085222606.1|3086164_3087031_-|glucose-1-phosphate-thymidylyltransferase-RfbA
MRGIILAGGSGTRLHPITMGISKQLLPVYDKPMIYYPLSTLMMAGIRDILIITTPHDADGFRRLLGDGSQFGIDLSYVQQEKPDGLAQAFVLGAKHIGNDCAALVLGDNIFYGPRLGTSLSRFQSVSGGAIFAYWVANPSAYGVVEFSADGMALSLEEKPQTPKSNYAVPGLYFYDNDVIEIAKGLQPSARGEYEITDVNRIYLNRGQLAVEVMARGTAWLDTGTFDSLLDASDFVRTLERRQGLKVGVPEEIAWRQGWVSDDELAKRAHKTVKSGYGGYLLELLERG
>NZ_AP022576.1|WP_085223015.1|3084942_3086214_+|YibE/F-family-protein
MTHSHSHTLSSGPSPLGPLPAKIVVGLLVAIGIAAIAGAAMLWPSRQHVDIPMPYQSATGGAVSTERAHVLSSGLGDCGSPSASQVLTTTPQPGTPGAGRCVQTVVAIDSGPNAGAKTLLEFSPGPGQPQFNPDDRIRVVRQVDAQGATTYAFYDFERGWSLVALALGFALVIVAVARWRGLLALVGIVVAFLVLVVFLLPALRDGAPAVPVALVASAAILYVVIYLAHGVNLRTSAALLGTLSALLLAAGLSWGAIELTHLTGLSDEQNSAVSAYLGSVSISGLLLAGFIIGSLGVLNDVTVTQASTVFELAHVGGDTSRRAIFLSAIRVGRDHIASTVYTLVLAYAGSSLPLLLLFSVANRSLSDVLISESVAIELVRSAVGGIALALSVPLTTAIAAVLAKPIGVSPVPAAPAGSRHTRT
>NZ_AP022576.1|WP_085222597.1|3097816_3098620_+|mycofactocin-coupled-SDR-family-oxidoreductase
MGALDGRVAFITGGARGQGRAHAVTLAAEGADIVAADAPDAMTDLTYPLGTEDDLRETAKLVEALGRRCLPLTLDVRDSAAVGAAIKQTVADMGSLDIVVANAGIVSTGLLEDVSDVIWQQLIDTNLTGAFHTLRAAIPVMRRQQFGRIVVTSSMGGRMGIPELAAYNATKWGVIGLAKSAALEVAKDGVTINVVCPTTTQTPMVQPAGGDDIPDDLVRRMMRANPIPQPWLQPEDVSRGVLYLVTDPGVITGSVLEIGLGGSARIH
>NZ_AP022576.1|WP_085222596.1|3099728_3100370_-|trypsin
MPARWCRGVGLAGAMLMCAAGVAGTAAAAPPPAPGILVSDGITKCSTGFAAQGGDGGYYLFTSGHCDHGAPFTYDENVPLGHITASEMLGDLKDAAIIRLDPDIGAPPGGVGGQRVRGVLSASQIKSGMPFCKFGAMTGETCGSVKSIDGEVIEANVFAQPGDSGGPGYVKNADGTVTAVGLVMSTSLAGDPNTTYFVLVQPLLGRWGVHIVG
>NZ_AP022576.1|WP_085222595.1|3100541_3101396_+|L,D-transpeptidase
MRAGIRGAVAVIGIGASVVAGTAVVNLPVPADVSLASASQSYAFPIASVLPTSTQAVGVAHPVIVTFRAPVTDRRAAEQALKITSKPAMTGKYEWLDNKVVQWVPDRYWPAHSTIALTVEGQPSEIKTGPRVIGIASISEHTFTVSIDGVESGPPSSLPSPHHRPHFGQEGVLPASLGRPEYPTPIGSYTVLSKDRSVQMDSSSVGIPVSDPDGYLVTVDYAVRITNHGLFVHSAPWAVNSLGLENVSHGCISLSPEDAEWYYNTVNVGDPVVVREATNELPSS
>NZ_AP022576.1|WP_085222594.1|3101588_3102131_-|hypothetical-protein
MTIFDRFNIGVVASAGLCGAAIALSPDAAAVPYMTGGGACMYGQAGEVPAAGGPVGAAGAGAAAAPCAAPLTDMAGVPMVVPGPGIVPVPAGAPLIALGPPIPPVPLGAPLPLGAPPVPIAAPLPLGAPLVALGGVADGIPVAPLIDMSGVKDAPTGPAPTGGPVAGQPVSPGPSPVHGG
>NZ_AP022576.1|WP_085223014.1|3102318_3103131_-|carotenoid-biosynthesis-protein
MLALTVVAVAVMALWPSLAAQAASAQAALLILFVVVHAWLGYSARGMAAFVVIAGVISFAFEALSIATGFPFGSYTHHLPGVKPLGVPLAVLLGWIMFGWLAWALARMIMRAVPATALGGAERFTTPIVATFILGGYDLAYDAVGATAHSWYSYDQPTGALGVPVTNYLGWLLTGWVIFQLVALVETKFPGRPVTQGRSYWLPACLFWLSTSAQVFVELIHGTDGVAVRGGKTIAIADVYESCASTALFTIVFTGIMALIRLYSRQPSPR
>NZ_AP022576.1|WP_085222593.1|3103316_3104087_+|alpha/beta-fold-hydrolase
MGERVTFLSSTGANLAGVIEVPETPARGWGVFAHGFTLGKDCPAAARISKQLASDGIGMLRFDALGLGGSDGNWGDGSFTVKVDDVVQACEFMANRGTPADILVGHSWGGAAVIAAAMRAPGVRSVVTVAAPFDPSHVEKHYDAVVDRCLAEGSVEWLVGGRKLILKRAFVEDVRAAHLHDKIKGLRLPLLILHSPTDNTVGIDNASEIFRLARHPRSFVSLEGSDHLLTARGQAHRAGRIIGAWADAYLGADAEG
>NZ_AP022576.1|WP_085222592.1|3104110_3105637_-|GMC-family-oxidoreductase-N-terminal-domain-containing-protein
MSSASNPSTSYDFVVVGAGVGGCVLASRLSEQPDTRVLLLEAGSATPPPASANPQLWPTLIGGEADWGESTTVQAATGSSVPLSRGRGVGGSSATNGMMFVRGHRDSYAPWENVGAKSWGYDDLLPYFKRSETAVGGDPALRGDSGPMRIGTLDPVHPIIAAGLEAALECGYRRATDISAGSEVGFGPTFLNIVDGKRLSAADAYLLPALNRPNLDFVAEATVHRLAIENGRCTGVEYTTADGTSLVRSGEVVLTAGTIGSAQLLMLSGVGPAQHLRDVGIEVSLDLPGVGSNFHDHVMSPVVYRSTRPMPPSRSSHSEALGLIQTEYAEHGPDVQLLLIDSTGIGLPGDDGSVVGYMIGASLMTPYSRGSVRLSGPTADHAPVLDPNYFGDERDVRTMITALRLARRLGAASAYEPWRAEEAAPGPAVEGDAALAAFAKAAYMSYFHPVGTCAMGDTDMSVVDSELRVHGISGLRVADGSVMPSIPSANTAATVYAIAERAAEMIGG
>NZ_AP022576.1|WP_085222591.1|3105739_3106465_+|TetR/AcrR-family-transcriptional-regulator
MNAQKPRTPGPEAAGKVLEAAAGLLACGGVDAVSTRAVAAAAGVQPPVIYRQFGDKQGLLDAVTGYVLQSYLRDKRGAALTDDPVQDFRDSWDLHVGFGLTHPDCYILAYVQDRPGKMPMLARESLEILHRLVSRIGDRGLLKMSVKRAVQVTHAAGLGYVLAQIRVPPEDRDPELSFITRENTIAAIVTDGPRRAPPSDLPGRAVALREALRANSNGPLTAGEKAMMAEWLDRLADQPAG
>NZ_AP022576.1|WP_085222590.1|3106466_3107957_-|bifunctional-phosphatase-PAP2/diacylglycerol-kinase-family-protein
MSRGPWQRVRGIKQITRGLGTLDRELFVAVAETPTPLLDSVMPPLTRAADHSKLWIMIAGLLFATKKPAAQRGAARGLVTLAVTSLFTNQVAKRIRPRQRPLYDSVPVVRRAHRRPTSNSLPSGHSASAAAFAVGVSLENPPLGFGLALLAGLVGLSRVATGAHYPGDVIAGLGIGAGIAVLGGRLVPPVVETALAQSEPLRIETPERPDGSGVVFVVNPASGSGTGARVVDEVRAELPKAEIVELGPDDDPERVLRNAASRAEVLAVGGGDGTVATAAAVAVEAGLPLAVFPAGTFNHFAKDIGCDTVGKTVESIRRGSVARVDLVCLNESQIVINTASIGAYPAFVQQREKLEKRIGKPLAGFYAMLHTLRTDQPVRIRYDNKTLLTSLVFLGNSLYLPTGFAPSRRIRMDDGLIDVRILETGRRFATTRILTALALGRLQRSPLYHELRVPEFSFSAVDAPTVVAHDGEVGDEYREASFTAKYRILPVFRPIR
>NZ_AP022576.1|WP_169718501.1|3108179_3108782_+|hypothetical-protein
MPPGTAGDEARDATLMTYILNAGTGYGGPANDFPETPYTADEVRRIVDRQQANNWSYGQDVGFVDRNGGRLVTTPNGMLMGLGGNWIQRLFSQQGGTAWGDIFMVNVAVDAQDPAGPARRLRQIVESGHAWYTDRKGRPVESNLALDRVLHHEELHSQQWATKGHSRMIAAYVWEVFRDRIFGKTNRLEAQAGLADGGYR

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Click the colored protein region to show detailed information

Crispr_ID: NZ_AP022576_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022576_3

3115569-3115713

Orphan

Consensus_repeat	Method
GGCCCCGGCGGTTTCGGGGGCGGCT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_AP022576_3

>merge|NZ_AP022576|3|3115569-3115713|CRISPRCasFinder
GGCCCCGGCGGTTTCGGGGGCGGCTTCGGCGGCCCCGGCTTCGGTGGCTTCGGTTTCGGTGGCGGCCCCGGCGGTTTCGGGGGCGGCTGGGGCAAACACGGTTGGGGTCATGGCGGGCCCGGCGGCCCCGGTTTCGGTGGTGGTT

>NZ_AP022576|3|3|3115569-3115713|CRISPRCasFinder
GGCCCCGGCGGTTTCGGGGGCGGCT	TCGGCGGCCCCGGCTTC
GGTGGCTTCGGTTTCGGTGGCGGCC	CCGGCGGTTTCGGGGGCGGCTGGGGCAAACACGGTTGGGGTCATGGCGGGCCC
GGCGGCCCCGGTTTCGGTGGTGGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022576.1\|WP_085222580.1\|3117362_3118091_+\|DUF3060-domain-containing-protein	unknown	unknown	gnl\|CDD\|371435
NZ_AP022576.1\|WP_085223013.1\|3115007_3115427_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_AP022576.1\|WP_085222576.1\|3123903_3125133_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022576.1\|WP_169718501.1\|3108179_3108782_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022576.1\|WP_085222584.1\|3111724_3113212_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227621
NZ_AP022576.1\|WP_085222575.1\|3125171_3125792_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_AP022576.1\|WP_085222579.1\|3118095_3121269_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_AP022576.1\|WP_085222583.1\|3113212_3114046_-\|glycoside-hydrolase-family-16-protein	unknown	unknown	gnl\|CDD\|185693
NZ_AP022576.1\|WP_085223012.1\|3116295_3117315_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_AP022576.1\|WP_085222588.1\|3108794_3109484_-\|GAP-family-protein	unknown	unknown	gnl\|CDD\|378566
NZ_AP022576.1\|WP_163667761.1\|3127152_3127779_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_AP022576.1\|WP_085222577.1\|3121799_3123749_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|223520
NZ_AP022576.1\|WP_085222582.1\|3114167_3114995_-\|glycoside-hydrolase-family-16-protein	unknown	unknown	gnl\|CDD\|185693
NZ_AP022576.1\|WP_085222586.1\|3111009_3111315_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022576.1\|WP_085222573.1\|3126412_3127078_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|226309
NZ_AP022576.1\|WP_085222585.1\|3111434_3111662_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022576.1\|WP_085222574.1\|3125911_3126409_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379275
NZ_AP022576.1\|WP_085222587.1\|3109428_3110997_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|236419
NZ_AP022576.1\|WP_085222578.1\|3121321_3121708_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022576.1\|WP_085222590.1\|3106466_3107957_-\|bifunctional-phosphatase-PAP2/diacylglycerol-kinase-family-protein	unknown	unknown	gnl\|CDD\|224513

Protein	Function_ID	Function_description	E-value
NZ_AP022576.1\|WP_085222580.1\|3117362_3118091_+\|DUF3060-domain-containing-protein	gnl\|CDD\|371435	pfam11259, DUF3060, Protein of unknown function (DUF3060). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed.	2.91349e-21
NZ_AP022576.1\|WP_085223013.1\|3115007_3115427_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.22172e-18
NZ_AP022576.1\|WP_085222583.1\|3113212_3114046_-\|glycoside-hydrolase-family-16-protein	gnl\|CDD\|185693	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.	4.19461e-33
NZ_AP022576.1\|WP_085222584.1\|3111724_3113212_+\|hypothetical-protein	gnl\|CDD\|227621	COG5305, COG5305, Predicted membrane protein [Function unknown].	4.99263e-46
NZ_AP022576.1\|WP_085222575.1\|3125171_3125792_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.3526e-15
NZ_AP022576.1\|WP_085222590.1\|3106466_3107957_-\|bifunctional-phosphatase-PAP2/diacylglycerol-kinase-family-protein	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	5.99857e-36
NZ_AP022576.1\|WP_085223012.1\|3116295_3117315_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	3.50778e-162
NZ_AP022576.1\|WP_085222588.1\|3108794_3109484_-\|GAP-family-protein	gnl\|CDD\|378566	pfam11139, SfLAP, Sap, sulfolipid-1-addressing protein. SAP is a transmembrane transport protein with six predicted transmembrane helices, with a hydrophilic domain between helices 3 and 4. This hyrodphobic region is highly variable among identified Gap-like (GPL, peptidoglycolipid, addressing protein) proteins and may be involved in substrate recognition. SAP also belongs to the LysE protein superfamily (pfam01810), whose members have been implicated in small molecule transport in bacteria. Other Gap proteins export metabolites across the cell membrane so it is possible that Sap specifically may be involved in transport of sulfolipid-1 across the membrane.	1.49166e-49
NZ_AP022576.1\|WP_163667761.1\|3127152_3127779_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	3.75793e-29
NZ_AP022576.1\|WP_085222577.1\|3121799_3123749_-\|Hsp70-family-protein	gnl\|CDD\|223520	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones].	1.36563e-38
NZ_AP022576.1\|WP_085222582.1\|3114167_3114995_-\|glycoside-hydrolase-family-16-protein	gnl\|CDD\|185693	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.	1.03978e-32
NZ_AP022576.1\|WP_085222573.1\|3126412_3127078_-\|L,D-transpeptidase	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	4.02523e-75
NZ_AP022576.1\|WP_085222574.1\|3125911_3126409_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379275	pfam13577, SnoaL_4, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.73733e-30
NZ_AP022576.1\|WP_085222587.1\|3109428_3110997_+\|amidohydrolase-family-protein	gnl\|CDD\|236419	PRK09228, PRK09228, guanine deaminase; Provisional.	1.79062e-127
NZ_AP022576.1\|WP_085222579.1\|3118095_3121269_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	2.64807e-55

>NZ_AP022576.1|WP_085223013.1|3115007_3115427_-|MarR-family-transcriptional-regulator
MSASHDEPLGFLLYRVMASLRPQVAAELKPLGLGLPEFVCMRILANHPGLTSAELARGTNVSAQAANQVLHALEDRGACSRAATAPAGRAMPARLTRRGKALLKRADAAVAVAEQRILTRLAAEQQSQLKELLYAAGTP
>NZ_AP022576.1|WP_085222582.1|3114167_3114995_-|glycoside-hydrolase-family-16-protein
MRMPGMDRRRMMMLAGFVAAAVPTARVGAAPARAGAYLFHDEFDGPAGSAPDPSKWVVASQRTPIHNPTGFDRPEFFGQYRDSRQNVFVDGKSNLVLRATRDGGNYFGGLVSGTWRGAIGTTWEARIKLNCLTGGCWPAWWLSNDDPGRSGEVDLMEWYGNGQWPSGTTVHANPDGTAFETHPIAVDGAWHTWRVTWNTGGMYFWQDFAEGAEPYFSVPATGIQDVHDPIRMWPFNDVGYTMFPMLNLAVGGSGGGDPGSGAYPAEMLVDWVRVF
>NZ_AP022576.1|WP_085222583.1|3113212_3114046_-|glycoside-hydrolase-family-16-protein
MDRRRMLLTTGLGILAAAASTPLPEALASPSTPAAPAAGPGGPYIFADEFDGPAGSLPDPGKWTIQTWQDDVYPPVEGIYRADPQNVFQDGHSNLVLRATHDFLANTYYTGKLRGNFRSMINQTWEAKIKLDCLTPGLWPSFWGVNEDPLPDGEVDIFEWYGNGQWAPGTTVHAASNGKTWEGKSIPGLVDGDWHTWRMHWGEKGFEFSRDGSEYFKVPNKPIHVAGNPPEDMRWPFNNPGYWMTPMFTLAVGGVGAGDPAAGVFPASMLVDYIRIW
>NZ_AP022576.1|WP_085222584.1|3111724_3113212_+|hypothetical-protein
MLDPLIVAVLATAVSLVGAGRPSFWYDEAATISAAYSRSPAQLWQMLSNVDAVHGLYYLLMHGWFQLVAPSEFWSRAPSGLAVGGAAAGIVVLGNQFSSRTVALTAGVICAILPRSTWAGIEARPYALSMMAAVWLTVLFVYATRRSSAWIWAAYGVAQAFSVVLDVYLVLLLLVHFAFVCAFLRRRSVVTGFVVTSVLASCAVAPFLFVAAGQVHQISWVAPIGHRTIEDVTVQQYFERSPPFAVLSALVIATAFAVWRWTSTKLVAADRQLLTLAAAWLLLPTALIVAWSAWVHPIYTPRYLCFTAPAIALVLGVCIGALAAKPWVAPAIVALFAVAAAPNYLWVQHNPYAKYGMDYSQVADLITAQAAPGDCLLINDTVTFMPAPMRPLMAARPDAYRKLIDLTLWQRATARRDVFDTNLIPQVVAQPLSQCRVVWIITQADESMPAHEQGSALPPGPRYGATPAFAVPHDLGFRLVERWQFNLVQVFKAQR
>NZ_AP022576.1|WP_085222585.1|3111434_3111662_+|hypothetical-protein
MKRVIAAGLLALGGLMTTAVGVANADEVQVEGSYSTLAACEVDGPHVEIAQNNHLYTHWDCRQHADGLYYLYLTN
>NZ_AP022576.1|WP_085222586.1|3111009_3111315_-|hypothetical-protein
MRPLASIGYNGQPLRDPFRVVRPPIAVLIDLTVLFPREPHRSGRYQPNGLQLHKVVEGWLSCWGLCEQGDWWGLVTYPIVYGSKQKNVTHWVPAWTLRRKG
>NZ_AP022576.1|WP_085222587.1|3109428_3110997_+|amidohydrolase-family-protein
MSVVNSELQLSATGSNPFIDIVTAPPNQPRSLSGPSPNTPRWLYVNCSATGKTLGEDHVARIHLGHIFHLAGSPLVSEAAHALVSIPEGALVVEDDGKIAFCGDRAGVPLKYRVTPVTDHRPGFLLPGFVDTHVHFPQTFAGDSYNGGQLLEWLNHCIYPAEARFVDRNFAKRAAVEFCDRRIASGTTAAMVFGSPFPEAQDALFAETARRGLRIVSGRGIQTVGPQAAKPLMTSEDDAIRLAREEINKWHAADTGNVKTARLHVALVPRFAIAVTGQTLKRLGELYDSVRDRGVYFHTHLNENNRPDTGEVDQTKQIYQVDSYLDTYDGKFLPGSKVGGPSMLGRRSVMAHAVHCQDTELQRMSETGTSIAHCPVSQQFLGSGTMPWLRTVASGVNIAAGTDFGGGDEWPIPQVLATAFKVHIGESGDAGVSMHPAEMLFIGTLGGARALDMEDRFGNFDVGKEADFVVIDPNRTPALKAVITEGVRSDDPAMARDQTLFGLLMRTRETSIAATFVQGRRL
>NZ_AP022576.1|WP_085222588.1|3108794_3109484_-|GAP-family-protein
MKGLLPVAESWSSLLTTLIPLALVIAVSPLSIIPAVLVLHAPQPRPAGLAFLGGWLVGLVVQTVLFVEGSGALGGMHKSPPTWASWLRVVLGSALILFGIYRWVTRHRHTESPAWMRSFSTMRPRRAAITGLVLTVIRVEVLLMCLAAGLAIGTADLHDADKLSAGIVFVAVSASTVAIPILAYVAAGHRLDNTMEKIKDWMEKNNAALMAAILILIGLMVLHNGIKAL
>NZ_AP022576.1|WP_169718501.1|3108179_3108782_+|hypothetical-protein
MPPGTAGDEARDATLMTYILNAGTGYGGPANDFPETPYTADEVRRIVDRQQANNWSYGQDVGFVDRNGGRLVTTPNGMLMGLGGNWIQRLFSQQGGTAWGDIFMVNVAVDAQDPAGPARRLRQIVESGHAWYTDRKGRPVESNLALDRVLHHEELHSQQWATKGHSRMIAAYVWEVFRDRIFGKTNRLEAQAGLADGGYR
>NZ_AP022576.1|WP_085222590.1|3106466_3107957_-|bifunctional-phosphatase-PAP2/diacylglycerol-kinase-family-protein
MSRGPWQRVRGIKQITRGLGTLDRELFVAVAETPTPLLDSVMPPLTRAADHSKLWIMIAGLLFATKKPAAQRGAARGLVTLAVTSLFTNQVAKRIRPRQRPLYDSVPVVRRAHRRPTSNSLPSGHSASAAAFAVGVSLENPPLGFGLALLAGLVGLSRVATGAHYPGDVIAGLGIGAGIAVLGGRLVPPVVETALAQSEPLRIETPERPDGSGVVFVVNPASGSGTGARVVDEVRAELPKAEIVELGPDDDPERVLRNAASRAEVLAVGGGDGTVATAAAVAVEAGLPLAVFPAGTFNHFAKDIGCDTVGKTVESIRRGSVARVDLVCLNESQIVINTASIGAYPAFVQQREKLEKRIGKPLAGFYAMLHTLRTDQPVRIRYDNKTLLTSLVFLGNSLYLPTGFAPSRRIRMDDGLIDVRILETGRRFATTRILTALALGRLQRSPLYHELRVPEFSFSAVDAPTVVAHDGEVGDEYREASFTAKYRILPVFRPIR
>NZ_AP022576.1|WP_085223012.1|3116295_3117315_-|NADP-dependent-oxidoreductase
MPDMPNRQIVLRRRPIGLVAPDDTELITRPAPEPAEGEALLRTTYVGLDAAVRTWLNDQPSYLPPVQLGEVIRAAGIGEVVQTRCDAFAVGDVVTTLTGFQEYVIIRDDVFSTPIPGEDDQLAIMSVYGPTGATAYIGMVDVGMPQPGETVVVSAAAGATGSIAGQIAKIAGARVVGIAGGPEKCRAVVEDFGFDACIDYKNDDIPAALKQHCPKRVDVYFDNVGGPILNAVLGRLANNARVVLCGVISSYLTGEHPGPANYVNLLSKTARMQGFNALDQWGRFEEAHAALRKWGAEGRLTHRQTVFDGIESCVDALNGLFTGANIGKTLVKLSEPSAP
>NZ_AP022576.1|WP_085222580.1|3117362_3118091_+|DUF3060-domain-containing-protein
MESQDDPEKRIRDLERPLAETARASELGGTPQGGHAYPPPPPGPVPPPPPGSVPPPPSMYGYGGPYGGPPPKSSGNRLWWIVGTIIVVGVLALAGGIAAFAAHQISGVRSIINSEISTTPSTSSRVTTSPRTTPRSPRSSTSAPQTTSTSALPPQGAPLDISGIDENKTIACNDNVVTVSGINNTIVITGHCASLTVSGMKNTVTVDSSDSIDASGMNNHVTYHSGAPKISNSGVDNDVSQG
>NZ_AP022576.1|WP_085222579.1|3118095_3121269_-|AAA-family-ATPase
MTPASSVCQVCGSVPRQGARFCDACGSPLAPQVETAEYKQVTVLFADVVRSMDIAAALGPERLREVMTELVDHSATVVQRYGGTVDKFTGDGIMALFGAPITLEDHAFRACLAALEIQEGVRQLAVEVGRRDGIDLRLRVGLNSGQVITGEVGATHLGYTAVGEQVGMAQRMETVAPPGGVMLSESTARLVENRAVLGEPETVHIKGFATTVPARRLLSVDAGRRKPRQQSRLVGRQSEKDAIAELLDRAAGGEGTVITVTGRPGVGKTRLMRETLATARSGGVEVFVTYCESHTRDVPLHVISRLLRAVFGLGGLTLEVARARVRAEIPEASAEDLVLLDDLLGIRDPDMPCPDITPDARRRRLVDLINTISPARPGAALYVVDDAQWIDSVSESLLTEFAAAVPGMRAALLVVYRPEYSGPLSRIPDAHPFLLAPLCDSHIKELINELLGADPSVAGLAAVIADRAAGLPFAAEEIVRDLAERGELEGAPGAYVCVREVREIHVPASLQAIIGARIDRLNATAKRTLNAAAVIGAQFDTELLKCLLGAVDVAPLVAASLVEQIGFTPHETYAFCHPLIQAVAYESQLKAGRAELHRHVAAVLQRTYGEFTGQEASIVATQYAAAGDLREAYEWYMQAGTWYGGRDIRAARASWQQAQRFADRLPDDHPDRLAMRIAPRALLCGSVFQVGGTPDETGFDELRALTTQAGDKRSLAVGMAGHLTTLTFNSQHREAAAMATEFATLVESIGDPAMTAGLFYAAAQAKWEVGEATECLRLAQRIIDVAHGDPTMGNFVIGSPLAWAITLKGAAGMFLGRSGWRQDLEEGIAMARSFDPTTHPFAQLYKYAAAVQNGAVLPTAEDVAQTAESLNIAQRSGDNAALAYALVNRATALIHRNDESSGEGWEYLAKAREMLVDEKLIVAIRRMTDAEIARGRARSGDLDGAIDLVSRILNAQFEAGTMMFRAPATTALVETLLARNGPGDIEAAQRAIDRLADVPVEPGFVLHEIPVLRLRALLARVHGDESGYRQFLQRFRARAQDVGFEGYVALADAMAAG
>NZ_AP022576.1|WP_085222578.1|3121321_3121708_-|hypothetical-protein
MGEHGAFGFDPEDFDRVIREGSEGLRDVFERIGRFAAAPGARTGFSAFFDDLSRRSRSGPETAGEAGDGVWAIYTVDAAGDAHVEQVYASELDALRANKNNVDPKRKVRFLPYGIAVSVLDDDAEEQT
>NZ_AP022576.1|WP_085222577.1|3121799_3123749_-|Hsp70-family-protein
MYDPLGLSIGTTNLVAARDGNPPVSRRAVLTLYPHCAPKVGLPEEDPNLTEPGMLMSGFVDRVGDSVALVSGDGSAHDPDLLMVEALDAMVLAAGADAGSSEISIAVPSYWKPATTQALRNGLRTHLGFVRSGMAPRLVSDAIASVTAANAELCLAATGVVGLLDFGGSGTSATLVDLAGDLKPLSATMRYTDFSGGEIDAALLLCVFEELGHGSGIDPASTAAVGQLARLREQCRAAKEQLSTERTTEFVAELGGRRATMKFTRDELGDLIQDRLTGLIYAFDDMLCRHRKSWSDLSAVVTVGGVASIPLVNERLSVHSRRPVVSPAQPAFAAAAGALVLAARGEEQDLRTRTSIGLLAASSGSDIIELPAGDLLVIDEEALTDRELAWSQTEYPGDIRVPYTPEAFDEESNPGGWSMRLNVIEPPRDRAWRRVRLSQLVVGMFALVAMTAVGGVAYTLTGIENRQAPPVPSVAPVPLPPVSSLMPSPAPPPPTAVPPPPTAAPVPSSVPPPPPEPPPSPPPPPVVTAEPPPVVTHPHPRPPQTTQPPSPVMTTPTTTPPPPSTTPPPPTTTPPPPSTSTQPPMTTQWIHVPLLPVPIPIQVPASQAPAAPQYPAQQYPGQYPGGGYGGGYPPSGGGYSQNPFLGPGY
>NZ_AP022576.1|WP_085222576.1|3123903_3125133_-|hypothetical-protein
MSSPSRYAQLSREQLTVLVPELLLIGQLIDRSGMAWCISSFGRDEMVQIAIEEWAGASPIYTRRMQQALKYEGVDVVTIFKGLQLDIGAPPQFMDFRYTVHDRWNGEFHLDHCGALLDVEPMGEQYVFGMCHTIEDPTFDATAVATNARAQVRPIHRPPRTPSDRHPHCAWTVKIDESYPEVHGIPALDIVRQTRAATWKLDPIDTSDEGQADYSGPLLSDFDFAAFSHSALVRMADEVCLQMHLLYLSFAIAVRARAADEAEAISVCTKGLTGIAGVAAERIHKALKLPGGPEGVLRVLELHPLLNPGGYVCADIEANRLAVRRSAAHDDGSWITLCSPESVQPLQAIATAVDPHIEVRVSGTDTDWTAGFTETDTTAAELPEVEVVKFSGGASWVFEPRRSLPLTVV
>NZ_AP022576.1|WP_085222575.1|3125171_3125792_+|TetR/AcrR-family-transcriptional-regulator
MFIVGGQTHGRSVRPTRRTSAPRKRGDDTRAKIIDETVRCIQEEGFAAATAKHVAERAGVTWGVIQYHFGDRNGLLMAVVDDGVDRLIESLSSADVSELPPQQRIEVVIDTAWSCYSSPTSMAAFEILRATRGSLGDSSRRHLLEMNSAIAQLGRLITTDPANAGVAEVIWATLRGVVLAQMVTGTTIDWSLERRALIDMVTRVLQ
>NZ_AP022576.1|WP_085222574.1|3125911_3126409_+|nuclear-transport-factor-2-family-protein
MCCNDGMTLDDLADIEAIKQVKYRYLRALDTKHWDDFTDTLADDIKADYGPSIGNELHFTNRADLVEYMRTSLPANVLTEHRVTHPEIIVDGDSATGSWYLQDKVIVADLDFMLIGAAFYRDTYRRTENGWKISGTGYDRTYDATMSLKGMDFNVKPGRAINSAG
>NZ_AP022576.1|WP_085222573.1|3126412_3127078_-|L,D-transpeptidase
MRRLLASLCALWISLVLAPTAGAAPAGTPGAVPWFANSVGNATQVVSVVSTGGSNATMEIFQRTAAGWQSLRSGIPTHVGSAGMAPQAKSGVPATPMGVYSLDAAFGTAPNPGTGLPYTQVAGPNYWWSGDDHSPTFNSMQVCPKAQCQFNTSESENLQIPQYKHAVVMGVNKNKTPGGGAAFFFHTTDGQPTEGCVAVDDAQLVSIMKWLRPGAVIAITK
>NZ_AP022576.1|WP_163667761.1|3127152_3127779_-|phosphatase-PAP2-family-protein
MAAYAALVAVAVYALMWVGYRQNWGWLHGLDWSLLNASHDVAVKHPMWLRFWEVVTNVLGPVPLRLVGTVATVVALLRRNVRAALVLFACGLLNGLVTQAAKGLADRPRPSTMLVPIAQTSFPSGHALETMASVLALLAFVVPMMNATMGRIAMTVSAIILLVVGISRVALNVHYPSDVLAGWALGYLYVLLCLAVFRPKPLPWWAFR

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Crispr_ID: NZ_AP022576_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022576_4

6115695-6115843

Orphan

Consensus_repeat	Method
GGGCCACCGGGCCCGCCGGGACCACCTTGAGGTCCACCTGGGCCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022576_4

>merge|NZ_AP022576|4|6115695-6115843|CRISPRCasFinder
GGGCCACCGGGCCCGCCGGGACCACCTTGAGGTCCACCTGGGCCGCCCGGGCCGTGTTCCCCAGGGCCGCCGGGGCCACCGGGCCCGCCGGGACCACCTTGAGGTCCGCCTGGGCCGCCGGGTCCACCGGGACCACCTTGAGGTCCGCC

>NZ_AP022576|4|4|6115695-6115843|CRISPRCasFinder
GGGCCACCGGGCCCGCCGGGACCACCTTGAGGTCCACCTGGGCCGCC	CGGGCCGTGTTCCCCAGGGCCGCCGGGGCCACCGGGCCCGCCGGGACCACCTTGA
GGTCCGCCTGGGCCGCCGGGTCCACCGGGACCACCTTGAGGTCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022576.1\|WP_085221659.1\|6113848_6114481_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_AP022576.1\|WP_085221653.1\|6099871_6109003_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_AP022576.1\|WP_085221655.1\|6110839_6112135_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224732
NZ_AP022576.1\|WP_085221665.1\|6123868_6125170_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_AP022576.1\|WP_085221664.1\|6121792_6123559_-\|DUF3556-domain-containing-protein	unknown	unknown	gnl\|CDD\|371888
NZ_AP022576.1\|WP_085221738.1\|6116441_6117227_+\|thioesterase-family-protein	unknown	unknown	gnl\|CDD\|379298
NZ_AP022576.1\|WP_163667802.1\|6114496_6115198_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_AP022576.1\|WP_085221662.1\|6119559_6121485_+\|molecular-chaperone-HtpG	unknown	unknown	gnl\|CDD\|235366
NZ_AP022576.1\|WP_139826795.1\|6109096_6109753_-\|glycoside-hydrolase	unknown	unknown	unknown
NZ_AP022576.1\|WP_085221666.1\|6125123_6125804_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_AP022576.1\|WP_085221651.1\|6096251_6098036_+\|N-acetylglutaminylglutamine-synthetase	unknown	unknown	gnl\|CDD\|132147
NZ_AP022576.1\|WP_163667646.1\|6127088_6127472_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_AP022576.1\|WP_085221739.1\|6118867_6119488_-\|TIGR03085-family-protein	unknown	unknown	gnl\|CDD\|132129
NZ_AP022576.1\|WP_085221656.1\|6112423_6113194_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_AP022576.1\|WP_085221652.1\|6098039_6099755_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143395
NZ_AP022576.1\|WP_085221663.1\|6121557_6121770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022576.1\|WP_085221650.1\|6094449_6096255_+\|N-acetylglutaminylglutamine-amidotransferase	unknown	unknown	gnl\|CDD\|274430
NZ_AP022576.1\|WP_085221661.1\|6117223_6118780_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|171961
NZ_AP022576.1\|WP_085221736.1\|6109944_6110868_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225852
NZ_AP022576.1\|WP_085221667.1\|6125873_6126953_+\|nitronate-monooxygenase	unknown	unknown	gnl\|CDD\|240081

Protein	Function_ID	Function_description	E-value
NZ_AP022576.1\|WP_085221659.1\|6113848_6114481_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	4.05745e-25
NZ_AP022576.1\|WP_085221653.1\|6099871_6109003_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	7.23162e-43
NZ_AP022576.1\|WP_085221655.1\|6110839_6112135_-\|glycosyltransferase	gnl\|CDD\|224732	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms].	1.21705e-76
NZ_AP022576.1\|WP_085221665.1\|6123868_6125170_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.81095e-62
NZ_AP022576.1\|WP_085221664.1\|6121792_6123559_-\|DUF3556-domain-containing-protein	gnl\|CDD\|371888	pfam12077, DUF3556, Transmembrane protein of unknown function (DUF3556). This family of transmembrane proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 576 to 592 amino acids in length.	0
NZ_AP022576.1\|WP_085221738.1\|6116441_6117227_+\|thioesterase-family-protein	gnl\|CDD\|379298	pfam13622, 4HBT_3, Thioesterase-like superfamily. This family contains a wide variety of enzymes, principally thioesterases. These enzymes are part of the Hotdog fold superfamily.	3.13652e-14
NZ_AP022576.1\|WP_163667802.1\|6114496_6115198_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	5.92708e-33
NZ_AP022576.1\|WP_085221662.1\|6119559_6121485_+\|molecular-chaperone-HtpG	gnl\|CDD\|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NZ_AP022576.1\|WP_085221666.1\|6125123_6125804_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	1.73464e-11
NZ_AP022576.1\|WP_085221651.1\|6096251_6098036_+\|N-acetylglutaminylglutamine-synthetase	gnl\|CDD\|132147	TIGR03103, trio_acet_GNAT, GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.	0
NZ_AP022576.1\|WP_163667646.1\|6127088_6127472_+\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	2.68429e-12
NZ_AP022576.1\|WP_085221739.1\|6118867_6119488_-\|TIGR03085-family-protein	gnl\|CDD\|132129	TIGR03085, TIGR03085, TIGR03085 family protein. This family, like pfam07398 and TIGRFAMs family TIGR03084, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized. [Hypothetical proteins, Conserved].	1.1365e-80
NZ_AP022576.1\|WP_085221656.1\|6112423_6113194_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	5.28629e-20
NZ_AP022576.1\|WP_085221652.1\|6098039_6099755_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143395	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.	2.38768e-16
NZ_AP022576.1\|WP_085221650.1\|6094449_6096255_+\|N-acetylglutaminylglutamine-amidotransferase	gnl\|CDD\|274430	TIGR03104, trio_amidotrans, asparagine synthase family amidotransferase. Members of this protein family are closely related to several isoforms of asparagine synthetase (glutamine amidotransferase) and typically have been given this name in genome annotation to date. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and a member of the GNAT family of acetyltransferases.	0
NZ_AP022576.1\|WP_085221661.1\|6117223_6118780_+\|AMP-binding-protein	gnl\|CDD\|171961	PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed.	3.3821e-107
NZ_AP022576.1\|WP_085221736.1\|6109944_6110868_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225852	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	5.94112e-93
NZ_AP022576.1\|WP_085221667.1\|6125873_6126953_+\|nitronate-monooxygenase	gnl\|CDD\|240081	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.	1.40288e-62

>NZ_AP022576.1|WP_163667802.1|6114496_6115198_-|histidine-phosphatase-family-protein
MAVNVRRFVAVALIAALAASWAPAHAAGNRTITLTLVRHAQSAANASGLIDTTVPGPELSPRGFCQANVVAAQLAPNHYDGVYASTMIRTQETATPTSQVLGEQITVLPGLREIEAGKFEGTPEADIPQTYFAAPARWLQGDRSARIPGSVNGNEFNARFTEAVQRIYDSGEQNPVAFSHSAAIMFWVLMNARNADPSLLKTKSLTNVGHVVLTGNPSDGWTLTEWDADPPPC
>NZ_AP022576.1|WP_085221659.1|6113848_6114481_+|class-I-SAM-dependent-methyltransferase
MTAPRRRGFNSAITGVWSFLAPAYDQPTLQQWVYRPPHNEVIARLRDHQSRRIADIACGTGILSDRIERELHPEAIYGVDMSDGMLAQARARSDRVQWLRGPAEQLPFDDGALDAVVTTSAFHFFDQPAALREFHRALVPGGLAVVSALSARQTLLHVSRNRWKPQHNASPAEVRSIFEGAGFTVADQHRIPRPFWLRFVSDVVTVGIKS
>NZ_AP022576.1|WP_085221656.1|6112423_6113194_-|class-I-SAM-dependent-methyltransferase
MTDRQERAMSFGSIAEDYDGLRPQAPQEAVDWLVPPGCEVAVDVGAGTGLFSRTLVDRAAQVIAVEPDARMRKVLTERSPGVRAFEGRGESIPLADATADGVFVSSAWHWMDHERALPEIGRVLRDGGRFGLIWTSRDREVDWVRDLGRLPGQDLEEVQSVDRFRQRLHFDLPEPQIFHNIEREIFRFVRTMTLEDAVAMLATYSRAIIASPEDRARTLDAARAAMEARFPGADMIDIPMRAWCWRADRVSRGAES
>NZ_AP022576.1|WP_085221655.1|6110839_6112135_-|glycosyltransferase
MRFVLASYGTRGDIEPSVAVGRELLRRGHDVQMAVSPDLVAFAEAAGLNAVAYGLDTQEWLDTYRDFWASAFHNSWKVPSLIRMWRELRESVVQSWVQMSETLTPLADGADVLFTGESFMETAANVAEYYDMPLATLHYVPIRANGQLVPILPSPLVRSAMSVSNLLTWRMTKHLEDAQRHELGLPDATRPASRRIADRGSLEIQAYDKACFPGLEAEWAKWKGQRPFVGALTLELTTDADEEVASWIAAGTPPICFGFGSMRVESPVDTVKMISAACAQLGERALVCSGWSDFGAVPHFDNVKVVGEVNYAAIFPACRAVVHHGGTGTTAAGLRAGVPTLVLSMDLVQTIWGAQITRLKVGAARRFANTNRASLVADLRQILTPECVSRAREFATRMSKPDASVASAADLLEDFAGPKRSAVSPVLRSGS
>NZ_AP022576.1|WP_085221736.1|6109944_6110868_+|class-I-SAM-dependent-methyltransferase
MSSDGAARTEGDSWDLASSVGATATMVAASRALASRDPDPLLDDRFAEPLVRAVGHPFFTRMLDGDIPLDDADVPLTARQRCEQMAVRTRFFDNFFLAATESGIRQVVILAAGLDARAYRLQWPEGTVVFEVDQPEVILFKDTTLAQIGAEPTAERRAVGVDLRDDWPTALRDNFFDTAAPTAWIAEGLLPYLPPDAQDRLLDNITALSAPGSRLATENITDMRVFTDERARALRSGWQKHGLDFDVADLVWVGERRQAGEHLAGTGWTVTQHPTEDLYAENGFALPDHELLAEFRRTISYLSAELG
>NZ_AP022576.1|WP_139826795.1|6109096_6109753_-|glycoside-hydrolase
MAIAASLVVSAGMIYAQGTKSSLPVEPPTATPTMTAAPPPKDPATGLGPHVATPSEVESLAALAATAPTGAQSFQFPLPAGVASEDRLQVKTIWAARVISVLFPQIKTIYGYRQDALPWHPNGLAIDVMIPNHASPEGIELGNQIAGYALANAKRWGINHVIWRQKIYPGPNSGAWTADLGNETANHYDHVHIATGGGGYPKGNEVYYIASMTPAPPE
>NZ_AP022576.1|WP_085221653.1|6099871_6109003_-|AAA-family-ATPase
MADVSSLSSVELGVLGPLQVRQDGTPVAIPGAKPRAILTMLGLHDGSVVPADVLIKLLWGDDPPRTAAKALQTHISSLRRALGDGLVVTEGAGWRLDGADVDASRYKLAAKAGRDAATVGDTNQAAVRLEEALVLWRGVPELPDGQRGLSEKTRWIESHAALVEDRADALLATGRAAEVIGDLEAAVAEAPLRERRWGQLMLALYRGGRQGEALAAYQRARSLLADELGVDPGPELRRLETAIVAQDTSLDVAVTQHLPSVTRAVTFLLTDIEGSTAAWEADADAMARALARHDELVEQVVTSRGGRLIKTRGEGDATFSVFERPSAAAAAAIELQDAITHEPWTSREPIRVRMALHTGEAELRDGDYFGRAVNRVARLRSLAEGGQILCSGATAELVIDSLADDVMLNDLGMRQLKNLVRPEHVFELRLETASAQPESQTAEPPMERPGLPAVLVGPGPFVGRGRELERLLSVWQAALAGGVPTVLIAGEPGVGKTRLAGEWSQRAYAQGAVVLYGRCDEDLGAPYQPFAEALRSLVPCMGADRLRGLRGADALLALVPGLSDVVPDLSPRAHPDPDTERYALFDAVVALLEIASKSAPVLLILDDLHWAAKPTLLLLRHLLRFGDHARVQIVGTYRSTDLDRSHPLAATLADLHRDGTANRLSLTGLDEEDVTTYVAEAGYDDDELAHALASVTGGNPFFLIEALRHIDESGGVWDQSTLPQGVREAVSRRLSRLPVETNKALAAAAVVGSRFALELVESVVGGDLIDAFDEACQAGIVIEEPGGNYRFNHAIVRQSLLAELASVRRMRLHQRIAATLETLPGADDELLAELAHHYYECAWAGNAAKAVFYCRRAADQAMARLAYEGAADLYRHALHSLEELDDELPDRDDQTAELLIARCEALLAAGDVVTAAGAVAQLQETTIDSARLAAWATCFDGQLSMLIHPERLDEAEVALGAAAAKLAQLDDANGEAKAHTVRAGCLARLGRIGDCEIALDDALTAARRAREHRRVNAVLAGAPLAALWGPNPVPRAGGRCLDVVRLLRITTDSPAVEATSTRCQAVLEAFRGRAAAARRMIDSARRTVVELGLRHARLEVEQFAGIVELIVGDPAAAEPPLRKAYNGFRRMGLDADTAETAALLGRACLALDRVAESDELCSESERLAGHALKASMGWRTLRAHLLARGGDHEEARRVAEAAVTLAERTDALVDHGDACLTLATVLAAAGNVAGARASAEQAVGLYERKGAAALAEMARGLLGRRVEQPVAPSARPEPSHVEFDNACVRAVARGDAAFHRGAFDEFEGYFADDIFFESRRKILGFASADLRSGRWPYDARRSLELDGMVQLRRTLVAVRGERLALYKTELGNADVSPGAPREELLQLIGIDEDGRFALDVWFDIDDIDGATAELDAAHARFEEAQPPARRLKNAATRVHERLFSDFAARNWDVITQVVADNYSIDDRRRVVNTGIRYGRVAGIDELRAAADVGMEINMLAVIAIRGERLALIHTHASGRDSETIASDAINVVEIDTDGRIAADVVFDPDDFDAAIAELETRYLAGEAAANAHAWSIIAGAYAALNRHEFPATTADWVNIDHRGEAAFGPGDLVAYLRAGLDAEQETRIYIEAVHRVADLGVVITYAAQETSQEGFDAEWRGITILMVDSDKISRSEVFDEAELDAALARFEQLSRPARRPENAATRVYDRFWSHFAARDWDAVTETLAESVSGMDHRRVVNAGMRGGRDAVIDDLRVAAELFSISMLDVVAIRGGRLALTRVRAAGRDPETVQNDAFNLIEIDADKRITLVDIFDLDDVDAAFNDLEARYLTGEAAPYAHMWTITTENYAALSRHELPPMTADAVTIDHRRAAAFAPGEFLQYLRAAIDQSQRTNIHPTIVHRLNELGTVITHTAQVTSNAGFDAEFQDVIVSTLVGNRVNHFELFDEADLDAALARFEELSRPVYRLENTASRLGEQFMRHLVAQNWDAMTQMMSDDFWSDDRRAVVGAGIRHGRDGQIADMRVIADIGLTTVAPHVIATRGDSLALTRVRFAFRGQDAAEFLTEVVGIAEIDANQQIAAIASFEPDDIDSAIAELDARYLAGEAAAHAHTWSVIMETFAALNRHEPLPTTPEFVSVDHRRTVAFAPGQLLAFVSTGSELDHDTTHAEAVHRLSNLGAVITFVTHGTSKEGFDAEWRAIAVSIIDSEKVSRCELFDEEDLDAAIARFEELHPTARGLENTASRASARYLERVVARDWEAAAEVLADDYYTDDRRHLTGGGVYGRDAEIVSAQAQVDVGTTQISQTVIAVRGERLALSRLRYAAYEHGLEGFVVEILIVVEANADGRCAATVAFDLDNIDAAFAELDARYLAAEAAAHADTWSVITQGFAVLNRREMPQTTPDWVNIDHRRGTSIAPGEMSTVLNAAWEHASDLRSFIESVHRLNDLGCVITHVAHETSQEGFYTEWRVVSVLTVEGDLVNRGEVFDEADLDAALARFDELQPQAPPLENAASRAVARLWTCFATQDWAALADTMIDDFWSHDHRRVVNAGVMRGRDVHVANMRTVAEVGFEAIASTVIATRGQYLALSRVWSSAHDFEPGETSADMLGIVQADGNNRLTTAALFDAEDIDAAFEELDAQYLAVEAAPHAHTWSIIARGFVALGRGEMPAITTDFVDIDHRRGPLAPGELIEYLRASFDDIKSNRIYLEAVHRLAGSCAVVTHVARNTSHRGFDAEWHVTDVITVDGDLISRVEMFDEADLDAALARFDELCSRPPQLENTASQLVERFQAYYAAGDWTAMSETLADNTSADDRRRVVGTGLRLGRDAAIADMRAIAELGRTDISSTVIATRGDRLALGRFVFSGRDQGPAFFTETLGVVEANSDNRIVAQISFDTDDVAAAFAELEARYLAGEAAAYSRTWSAITRVFEMINRGEMPTTTEDFEDIDHRRGALLAPGDLSQYLRVSLNDSARSHVYPVCVHRLTDRGAVVTHAAQGTSRGGFEAEWRMTDVFIVDGDLIKRYEFFDEADLDVALARFEELDT
>NZ_AP022576.1|WP_085221652.1|6098039_6099755_-|aldehyde-dehydrogenase-family-protein
MTAGTAMDAPALEKALDDLSSGAPSWAALPLADKVTMLEALPHRIFDVAPQMVTASAEAKGISSNSTWAAEEWTTNIWVSIQAINTQLRVLKRILAGKEPIDAGAVHTRPDGQVVVDIFPLTPYDRLFFHGYHATVWMEAATDAEQTRRDAAQIYRGRTPGRSGVCLVLGAGNLGSITALDIIDQLYVRGNVCAVKLNPVNDYLGPFYEEIFGEFISRGWLRILYGGADVGGYLTQHQKIDTIHMTGSAATYDAVTWGTDDSVAARKADNTPLVRKPITAELGGVTPFIVVPGDWSDADLRFQAEHIATTKLTNCGHNCNATQLLVIPQDWPLADKLIDEIRTVMRDAEPRPPYYPHSQERTAKACDGMPGAEFFCNQKTRALIPDVDPGSGASILTDEVFAGVLGVVRLPGKTPKQFLDNAVAFANDVLPGSLGAVIAIDPKTRKHNAEVLDDAIARLHYGAIGINVWTGMVFALAPWGAYPGNTPQSIGSGIGMVHNAFMLAKPQKAVVEVPFRPAPRSFFGGELTLSPKPVFFITNKTALTTVRRLVKFAVLRNPAALPGILASAVRG
>NZ_AP022576.1|WP_085221651.1|6096251_6098036_+|N-acetylglutaminylglutamine-synthetase
MTDLDPSDDHPEAITLGLHDASPPHMVDAMAKDVELELGWGRLIFGQTFADPDTLAEALRREAAGRRDICIYARESHVVVAKAPTELFIDPSHTYRLRFTPEHAEGLAPSPLGVTVRTLNDPADADAMNRVFVRCGMVPAPVETIWDNHQHADAVTYLVAVRDEDGAVVGTVTGVDHEVLFCDPEHGSSLWTLAVDPAAGLPGMGEALTRTLAEHFRSAGRAYMDLSVGHDNAAAIALYEKLGFRRVPVLAIKRKNAINEPLFSPPPETVDDLNPYARIIADEALRRGIQVEVLDAETGEMRLSLGGRSLITRESLSEFTSAIAMCRCDDKRLTRRLVSDAGITVPRARLATFNDDDYVFLHEVGEVVVKPTRGEQGKGITVGVVAEDELTTALARARQQYPEVLIEQRVNGDDLRLVVIDGRVVAAALRVPPEIIGTGEHTVRDLIAAESRRRSAATGGESRIPLDDLTESTVRDAGWMLDDVLPEGIRLRVRRTANLHQGATIHDVTAQVHPDLCRVGVAAAEAIGIPVTGIDLLVPDITGVEYAFIEANERPGLANHEPQPTATAFIDFLFPGQQGVPTAWSPEEPPPHHD
>NZ_AP022576.1|WP_085221650.1|6094449_6096255_+|N-acetylglutaminylglutamine-amidotransferase
MCGATGEVRLDDRVPDVAAVSAMAAVMAPRGPDGAGVWSQGRVALGHRRLKIIDLTEAGAQPMVDAELGLTIVWNGCIYNYKQLRTELEGHGYRFFSTSDSEVLLKAYHRWGDDFVSRLKGMFAFAIVERESGRVLLGRDRLGIKPLYLTEDSNRIRFASTLPALLAGGGVDTRIDPVALHHYMTFHSVVPAPLTILRGVRKIPPGSLLAIEPDGRRVATTYWKPDFTRHADRADWSERDWEDAVLSSLRLAVERRLVADVPVGCLLSGGVDSSLIVGLLAEAGQHGLSTFSIGFESVGGVEGDEFRYSDIVAERFDTDHHQIRIETDRMLPALDGAIGAMSEPMVSHDCVAFYLLSQEVAKHVKVVQSGQGADEVFAGYHWYPPMGSPDAATLEGAVSEYRGAFFDRDTAGLEALLASGYVAPGDPSGLFVSEHFAQAGAETGIDRALRLDTTVMLVDDPVKRVDNMTMAWGLEGRVPFLDHELVELAATCPPELKIAHEGKGVLKQAARRVIPSEVIDRPKGYFPVPALTHLAGPYLDLVRDALYAPIAKERGLFDAEAVDALLADPNGKLTPLRGNELWQIGLLELWLQRHGVTGPAA
>NZ_AP022576.1|WP_085221738.1|6116441_6117227_+|thioesterase-family-protein
MRDESRYVPTAMARGGWGPSMSGHVVGGILAAALEGVVDDPELQPARLTVDLPAPAALEPFELHTKVQHERRRLRLVEALLIQRGEPVARASALLLRRGSQPDGTVWSQPLQMPRLPVEQDGDTPTLFLRTYGWGGDLQNPDPEWDMTGPKYTWLHETRPLVDDEPLTPFTRAALCADVTAAIANWGSKALEFINVDYTLTLSRLPEGPHIGLAALTHYSDGGVANGSAVVVDHLGPVGSAVSVAIAHSGFRPPSDLPSAG
>NZ_AP022576.1|WP_085221661.1|6117223_6118780_+|AMP-binding-protein
MTTREDVTYWRLITESAQHQPNRALFADDYGRSLSARQLNDAACETAAAFADRGIGAQTVVSWQLPTTLETVVVMAALARLGAVQNPIIPILREREVGFITGQLSTEFLVVPEVWRGFHHGALARSLASAQGFEVITVDLATPPHAGELRLPRASAETLTAAPGGDNQWIYYSSGTTAAPKGIRHTDSTVIAGSRGMVAAMGITAADVDPIAFPIAHIGGAAMVAASLMTGMRLALFEVFDPATTPLAIATHNPTFLGTATPFFVAFLEAQRAHGDQPLFGALRGCIAGGAPITAELGRQVRETFGMPGIANAWGMTEFPVATSPPLNAAPEVLDYTVGAPVSGVSVRVVDSRENELAVGQEGELRLKGPQCFLGYADATLDAHAFDDEGWLRTGDLGLIDTDGNVRVTGRIKDAIIRNAENISALEIENVLATHPAVADVAVIGVPDRTAGERVCAVVIPASADGVSLESLVQHCHSRGLSRYKHPEHLVIVDTLPRNQFGKVIKKDLREAFGRGQL
>NZ_AP022576.1|WP_085221739.1|6118867_6119488_-|TIGR03085-family-protein
MSVAQRERAALVDTMRSVGPDAPTLCDGWTTRDLAAHLVIREYRPDAGPGILIPFFAGHTAKVQDDVAERTDWNALLDKVASGPPVYSPLKLLDPVANIGEMFIHHEDVRRAQPSWTPRALEPALANSLRRTLPLMARMTLAKVPGRVALRIPEGRTVLIAGSGPAVTVTGAPEELLLFSVGRAARVEFDGDASTVQAVRDAPKGL
>NZ_AP022576.1|WP_085221662.1|6119559_6121485_+|molecular-chaperone-HtpG
MNAGVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLNVDTSDLHIEIDVDKGARTLTIRDNGIGMTRDEVIGLIGTLAKSGTAELRQQLREAKNEAASEELIGQFGIGFYSSFMVADKVELLTRKAGESEATRWESTGEGTYTIESVEDAPQGTAVTLHLKPEDAEDELHDYTSEWKLRSLVKQYSDFIAWPIRMEVERRTPAEEEGGDEVVTIETETLNSMKALWARPKDEVSDEEYKEFYKHIAHAWDDPLEVIVMKAEGTFEYQALLFIPSHAPFDLFSRDAQIGVQLYVKRVFIMGDCDQLMPEYLRFVKGVVDAQDLSLNVSREILQQDRQINAIRRRLTKKVLSTIKDLQSERPEDYRTFWTQFGRVLKEGLLSDVDNQDTLLQISSFASTHSEEDATTLAEYVARMKEGQEQIFYATGETRQQILKSPHLEAFKAKGYEVLILTDPVDEVWVGTVTEFDGKPLQSVAKGEVDLDSDEDSSDAEREEREKEFADLLTWLKETLSDHVKEVRLSTRLTESPACLITDAFGISPALARIYQASGQNIPIGKRILELNPDHPLITGLRQAHQERADDPTVAETAELLYGTALLAEGGALEDPARFAELLANQLTRTL
>NZ_AP022576.1|WP_085221663.1|6121557_6121770_+|hypothetical-protein
MATFRAIDPHGEIVATKSFDSAEAAHAWFIDTVAGSSELGWRMEVDDNGSWAFFDDTGGFTAPASRRPRS
>NZ_AP022576.1|WP_085221664.1|6121792_6123559_-|DUF3556-domain-containing-protein
MGFITPDLPDVDRDTWPSLPRSTRMQVVTRHWVEHGFGTPYAIYLLYVLKMAAYAGGAAAVISLTPGLGGLDRIQDWWTQPIVYQKVVVYTLLFEVLGLGCGSGPLTARFWPPIGGFLYWLRPNTIRLPPWPRVVPFTRGDSRSIIDVALYAIVLASGVWSLLSAGRGGPVTASGDVGLLDPALLVPAIIALALLGLRDKTVFLAARGEHYWLTLFVFFFAFTDQIAAFKIIMLGLWWGAATSKLNHHFPYVVAVMTSNHPLLRSKLFNWVKHRLYRDPVNDLRPSWVPKVMAHVGGTTAEFLVPLVLVFFADGHRWAWFLIAFMVIFHLNIISNLPMGVPLEWNVFLIFSLFYLFGHYNTIHATDLQSPLLLAILVVALAVVPILGNLFPQQFSFLPAMRYYAGNWATSVWCFRAGAEEKIETNVVKSSALTAKQLTRLYDEATAEITIDKAGAFRSMHTHGRALNGLLPRAIDDETAYRMREGEAVAGPLVGWNFGEGHLHNEQLLEALQRRCQFDEGDVRVVILEGQPIQTQRQWYRIADAKAGVIEEGYVTVEDMLARQPWPEPGDEFPVHLTHDATKRLSTAD
>NZ_AP022576.1|WP_085221665.1|6123868_6125170_+|MFS-transporter
MSSTTEQVVPARHRTPLNRSQIVGFWGAWTGWTLDGMDSFIYALVLTPALTELLPRSGISATPANVGLVGSILFALFLVGWGLSFIWGPIADRFGRTKVLAATIFTFAIFTGLSAMAQNVWELATFRFIAGVGIGGEWALAGTYVAEAWPEDRRKMGAGYLQTGYYAGFFLAAALNYTIGVHFGWRAMFLTGAVPIVIAILILTRVKETEKWQRAEAGTSVRVNPLREILGARYRRRTWVACALLTIAIVGLWAGTVYEPTAVIQLAQHAGLGKGDATRTASWATGLLSIGTILGCLVLPAIAERVGRRKTCAIYFAGMAVAITGSFGWAFYLPNGLAPFIAWLFVLGFFGGNFALFSLWLPEQFETRVRATAFAFCTSIGRFVGAGVNFVLGAAVLHMHTLGLPVALTAVVFVIGLFIIPLAPETHGETLPQ
>NZ_AP022576.1|WP_085221666.1|6125123_6125804_-|PadR-family-transcriptional-regulator
MSRRQLSPTSFAILGLLSIQPFTTYELAQQMERTLSWFWPRAASMIYEEPKKLASAGLADPRVTFTGKRRSTVYEITDAGRDALRDWLDAPAAGMRMEFEAMIKLAFADAGDVGQLRATVAEIRADAEARLAEIMNRLAEYDTTGGPFPDRLPVAAITGKLLMGQHQAVIRWARWAEDAIREWTGVTPATGARVPAHAFTAGWPSQYGDDSPTVAASRRASRAPAE
>NZ_AP022576.1|WP_085221667.1|6125873_6126953_+|nitronate-monooxygenase
MPDSTSNSAIDDDHPGPVVVPPDTTGFETRLTREYGLRHPLVGAGMGFIAHERLAAAVTNAGGLGVLGASPDPAESLAVMVERLRALTSGPFGVDLICADTGLGPASTDKHIDECIRLDVPLVVFHHDPPPADWVRALCTAGIQVWMQASSPEIAATAIGFGVSGIVAQGSEAGGHARGRIPLHALLRTIQHNWPDMLLLAAGGISDGTAVAAALRAGADGVWVGTALVAAAEANAHPEYQRRLVDSPGKTLRTNAFGPEWPDQPYRLLATPAVHSAEATTARQDETIGGTRLFPHSANMAYDLPVRSALPPTPETSGDWESMVYPAGQGVGAVRRIAPAAEIIEQMMGQARACHPLSA
>NZ_AP022576.1|WP_163667646.1|6127088_6127472_+|VOC-family-protein
MSHISFSVRDAEVSARWWAALFDLTEIDRAAGDGWHGILLMHPSTRTIIEFQQHDAHQGEAFDPRRTGLDHVAFKVDTRAELDEWLARFEQLGVDHTPIADREYGAVLTFRDIDGIQFEMFFKADHP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP022576_3	3.1\|3115594\|17\|NZ_AP022576\|CRISPRCasFinder	3115594-3115610	17	NZ_AP022576.1	276490-276506	1	0.941

1. spacer 3.1|3115594|17|NZ_AP022576|CRISPRCasFinder matches to position: 276490-276506, mismatch: 1, identity: 0.941

tcggcggccccggcttc	CRISPR spacer
tcggcggccccgtcttc	Protospacer
************ ****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1148251 : 1157861

Shahe_endorna-like_virus(42.86%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085221844.1\|1148251_1149526_+	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	8.7e-07	41.9
WP_085221879.1\|1149531_1150284_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_085221878.1\|1150506_1151313_-	class I SAM-dependent methyltransferase	A0A2R8FDY2	Brazilian_cedratvirus	1.9e-55	51.9
WP_139826803.1\|1151603_1152881_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	5.1e-07	41.9
WP_085221843.1\|1153187_1154456_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	2.5e-06	39.7
WP_085221842.1\|1154477_1155284_-	class I SAM-dependent methyltransferase	A0A2R8FDY2	Brazilian_cedratvirus	4.3e-52	49.3
WP_139826811.1\|1155423_1156437_-	class I SAM-dependent methyltransferase	A0A2H4PE59	Mycobacterium_phage	1.4e-12	33.5
WP_085221840.1\|1156739_1157861_-	NAD-dependent epimerase/dehydratase family protein	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	1.6e-17	24.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP022576

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection