CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP022617	Mycolicibacterium monacense strain JCM 15658	3 crisprs	DEDDh,cas3,csa3,DinG,cas4,WYL,casR	0	3	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022617_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022617_1

29245-29331

Orphan

Consensus_repeat	Method
CGCCGGTCGGGTGACGGCGGATGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022617_1

>merge|NZ_AP022617|1|29245-29331|CRISPRCasFinder
CGCCGGTCGGGTGACGGCGGATGATGCCGGTCTGCTGGGCGCTCGGCACGACGGGCTGGGCGCCGGTCGGGTGACGGCGGATGATGC

>NZ_AP022617|1|1|29245-29331|CRISPRCasFinder
CGCCGGTCGGGTGACGGCGGATGATGC	CGGTCTGCTGGGCGCTCGGCACGACGGGCTGGG
CGCCGGTCGGGTGACGGCGGATGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022617.1\|WP_064872367.1\|37727_39116_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022617.1\|WP_083045370.1\|35512_36643_+\|dimethyl-sulfone-monooxygenase-SfnG	unknown	unknown	gnl\|CDD\|274923
NZ_AP022617.1\|WP_011856950.1\|18345_18735_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|224861
NZ_AP022617.1\|WP_011856942.1\|31914_32817_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_AP022617.1\|WP_011856949.1\|19686_20436_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181324
NZ_AP022617.1\|WP_011856948.1\|20485_22150_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234679
NZ_AP022617.1\|WP_011561705.1\|30740_31904_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_AP022617.1\|WP_011856951.1\|17562_18327_+\|precorrin-6A-synthase-(deacetylating)	unknown	unknown	gnl\|CDD\|236218
NZ_AP022617.1\|WP_064872369.1\|39761_41345_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_AP022617.1\|WP_011856943.1\|29395_30478_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_AP022617.1\|WP_011561709.1\|25904_26201_-\|chorismate-mutase	unknown	unknown	gnl\|CDD\|236117
NZ_AP022617.1\|WP_083045386.1\|23809_25852_+\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224748
NZ_AP022617.1\|WP_011856947.1\|22201_23650_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
NZ_AP022617.1\|WP_064872359.1\|26399_28754_+\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_AP022617.1\|WP_083045369.1\|32962_34492_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|236204
NZ_AP022617.1\|WP_011561720.1\|13183_13453_+\|DUF4235-domain-containing-protein	unknown	unknown	gnl\|CDD\|379422
NZ_AP022617.1\|WP_064872365.1\|36788_37670_+\|DUF5336-domain-containing-protein	unknown	unknown	gnl\|CDD\|375092
NZ_AP022617.1\|WP_011561717.1\|16482_17535_+\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|377085
NZ_AP022617.1\|WP_011561702.1\|34563_35412_-\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274680
NZ_AP022617.1\|WP_011561698.1\|39135_39765_+\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544

Protein	Function_ID	Function_description	E-value
NZ_AP022617.1\|WP_083045370.1\|35512_36643_+\|dimethyl-sulfone-monooxygenase-SfnG	gnl\|CDD\|274923	TIGR04021, LLM_DMSO2_sfnG, dimethyl sulfone monooxygenase SfnG. This family of FMNH2-dependent members of the luciferase-like monooxygenase (LLM) family includes SfnG, a monooxygenase that converts dimethylsulphone (DMSO2) to methanesulphonate. This step can be followed immediately by methanesulfonate sulfonatase (an alkanesulfonate monooxygenase - see TIGR03565) for the FMNH2-dependent conversion an inorganic form. [Central intermediary metabolism, Sulfur metabolism].	0
NZ_AP022617.1\|WP_011856950.1\|18345_18735_+\|phage-holin-family-protein	gnl\|CDD\|224861	COG1950, COG1950, Predicted membrane protein [Function unknown].	1.5624e-25
NZ_AP022617.1\|WP_011856942.1\|31914_32817_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_AP022617.1\|WP_011856949.1\|19686_20436_+\|SDR-family-oxidoreductase	gnl\|CDD\|181324	PRK08251, PRK08251, SDR family oxidoreductase.	2.0443e-163
NZ_AP022617.1\|WP_011856948.1\|20485_22150_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
NZ_AP022617.1\|WP_011561705.1\|30740_31904_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_AP022617.1\|WP_011856951.1\|17562_18327_+\|precorrin-6A-synthase-(deacetylating)	gnl\|CDD\|236218	PRK08284, PRK08284, precorrin 6A synthase; Provisional.	4.57389e-141
NZ_AP022617.1\|WP_064872369.1\|39761_41345_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_AP022617.1\|WP_011856943.1\|29395_30478_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.85987e-42
NZ_AP022617.1\|WP_011561709.1\|25904_26201_-\|chorismate-mutase	gnl\|CDD\|236117	PRK07857, PRK07857, chorismate mutase.	2.81797e-39
NZ_AP022617.1\|WP_083045386.1\|23809_25852_+\|acyltransferase-family-protein	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	3.4592e-68
NZ_AP022617.1\|WP_011856947.1\|22201_23650_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NZ_AP022617.1\|WP_064872359.1\|26399_28754_+\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_AP022617.1\|WP_083045369.1\|32962_34492_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|236204	PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated.	0
NZ_AP022617.1\|WP_011561720.1\|13183_13453_+\|DUF4235-domain-containing-protein	gnl\|CDD\|379422	pfam14019, DUF4235, Protein of unknown function (DUF4235). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 88 and 119 amino acids in length.	2.91148e-19
NZ_AP022617.1\|WP_064872365.1\|36788_37670_+\|DUF5336-domain-containing-protein	gnl\|CDD\|375092	pfam17270, DUF5336, Family of unknown function (DUF5336). This Actinobacterial family of proteins has no known function. Most of the family members are predicted to have have 4 trans-membrane regions.	5.67623e-58
NZ_AP022617.1\|WP_011561717.1\|16482_17535_+\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	1.22002e-68
NZ_AP022617.1\|WP_011561702.1\|34563_35412_-\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274680	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes a domain found in a distinctive subset of bacterial luciferase homologs, found only in F420-biosynthesizing members of the Actinobacteria. [Unknown function, Enzymes of unknown specificity].	7.95963e-89
NZ_AP022617.1\|WP_011561698.1\|39135_39765_+\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	6.28927e-104

>NZ_AP022617.1|WP_064872359.1|26399_28754_+|DNA-helicase-PcrA
MSVNVTEPRSRPDDRAEELLDGLNPQQRQAVLHEGSPLLIVAGAGSGKTAVLTRRIAYLLAARDVGVGQVLAITFTNKAAAEMRERVVGLIGPRARSMWVATFHSTCVRILRNQASLLPGLNSNFSIYDADDSRRLLLMIGKDMGLDTKKYSPRLLSNGISNLKNELIGPEQAAAEASEAADDLARIIADVYAEYQRRLRAANALDFDDLIGETVAVLQRFPQIAQYYRRRFRHILVDEYQDTNHAQYVLVRELAGHGAHDTDDDGVAPAELCVVGDADQSIYAFRGATIRNIEDFERDYPNATTILLEQNYRSTQTILNAANSVIARNAGRREKRLWTDSGHGELIVGYVADNEHDEARFVAQEIDRLADDGHSYNDFAVFYRTNNNSRALEEVFIRAGIPYKVVGGVRFYERREIRDIVAYLRVLDNPGDSVSMRRILNTPRRGIGDRAEACVAVYAENTGASFNDALQAAAEGKVPMLNTRSEKCIASFVQMLDDLRGRLGDELGELVEAVLDRTGYRAELEASNDPQDLARLDNLNELVSVAHEFSIDRANAAALAEDLDEPVDEDIPDTGVLAQFLERVSLVADADDIPEHGSGVVTMMTLHTAKGLEFPVVFVTGWEDGMFPHMRALGDPNELSEERRLAYVGITRARQRLYLSRAKVRSSWGQPMLNPESRFLREIPQELIDWRRTDPTPSFSAPGRMSSGSSGTGFGAPRPSPMRSGGGKKPLIVLEPGDRINHDKYGLGRVEEVSGVGESAMSLIDFGSAGRVKLMHNHAPVQKL
>NZ_AP022617.1|WP_011561709.1|25904_26201_-|chorismate-mutase
MRPEPPHEESEMSIETDQSLDIDALRQEIDELDAAILAAVQRRTEVSKIIGRARMASGGTRLVHSREMKVIERYSVLGPEGKDLAMLLLRLGRGRLGH
>NZ_AP022617.1|WP_083045386.1|23809_25852_+|acyltransferase-family-protein
MTAVTAAPVRVVARRRWVAPVAGRTRRGTAGRREIPALDGIRAVAVALVLADHGGVPGVSGGFLGVDVFFVLSGFLITSLLLDELGRTGRVDLRGFWIRRARRLLPALLAMVAAVVAARVFFPPDAVTTLRDDAVAAFFWVANWAFVAQHTDYFSQGSPPSPLQHTWSLGVEEQFYLVWPLLLIAVVGVLAIRRSAPTLRAVRWGVFGLAVVGGAASATAAVLLTSEASANRVYFGTDTRVQALLVGAAAAALLVRDWSTVTMGTPIRARWGRWVARLLSVVGLAGLAVLAHYATGAPAEYRMGLFTAAAAAAVLVVATAALDQAGPVARLLALRPLVWLGTISYGVYLWHWPIFLFLNGERTGWTGWPLLIARCAATLAVAVLSYWLLERPIRRWRPATVPQLPLALATAATAAVVTISVVPVGVQPSEDPSTNLLDINSAAAVLPERPIPVGAVAPQRPPGTRSVAVFGDSVAWTLMRYLPETPGLHFSNYTTIGCGIARGGPYKTTGQTLTQKPECETWPTRWAQRIGHDRPDVVLLMIGRWELVDRINEGKWTHVGDDAYDGYLRGELDRALDILGSTGARVVVTTAPYNRRAEQADGTLYPEDDPDRADAWNELLREATAKRPNVTVLDLNKKLSPRGYYTNRVEGIQMRDDGVHPTKEAVEWLTPWLTEALSKK
>NZ_AP022617.1|WP_011856947.1|22201_23650_+|NAD-dependent-succinate-semialdehyde-dehydrogenase
MDTTALLKSVPTGLWIGGEEREAKSTFNVLDPSSDEVLVAVGDATAEDAVAALDAACAVQAEWAATPARKRGEILRSVFETLTDRADDIAALMTLEMGKVLAESKGEVTYGAEFFRWFAEEAVRIGGRYTPSPAGTGRIIVTKQPVGPCYAITPWNFPLAMGTRKMGPAFAAGCTMIVKPAQETPLTMLYLAKLMAEAGLPKGVLSVLPTSSPGPVTEALVDDGRLRKLTFTGSTGVGKSLVKQSADKLLRTSMELGGNAPFIVFDDADIDAAVDGAMLAKMRNGGEACTAANRFHVANSVREEFTEKLVKRMSEVTLGNGLDESATLGPLINNKQLQKVTELVSDAVSRGATVAVGGVAPGGPGNFYPATVLADVPADARILKEEVFGPVAPITGFDSEEEGVAAANDTEYGLAAYVYTRSLDRALRVAEAIESGMVGINRGVISDAAAPFGGVKESGFGREGGTEGIEEYLDTKYIALTK
>NZ_AP022617.1|WP_011856948.1|20485_22150_-|glucose-6-phosphate-isomerase
MTADDQLTDISATSAWQALQRHHGEIAGRHLRELFAEDPSRGTELTVSVGDLYIDYSKHRVTRETLRLLVDLARAAGLEKRRDAMLSGVHINTSEDRAVLHTALRLPRDASLTVDGQDVVADVHEVLDRMGDFTDRLRSGDWTGATGERIRTVVNIGIGGSDLGPVMVYEALRHYADAGISARFVSNVDPADLVAKLDGLDPATTLFIVASKTFSTLETLTNATAARRWLTDTLGDAAVARHFVAVSTNQKLVDEFGIDTANMFGFWDWVGGRYSVDSAIGLSVMAAIGRERFAEFLAGFHLVDEHFRTAPLEANAPALLGLIGLWYSNFFGAQSRAVLPYSNDLSRFAAYLQQLTMESNGKSVRADGTPVSTDTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFSQPTDDLPTADGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAAEDTPADVVPHKVMPGNRPTTSILATKLTPSVVGQLIALYEHQVFTEGVVWGVDSFDQWGVELGKTQAKALLPVITADDSPAEQSDTSTDALVRRYRAERGRSA
>NZ_AP022617.1|WP_011856949.1|19686_20436_+|SDR-family-oxidoreductase
MTRQRILITGASSGLGAGMARAFAAKGRDLALCARRVDRLDELKAELTQRYPEITVAVAELDVNDHDQVPKVFAALSDELGGLDRVIVNAGLGKGAPLGSGKLWANKATIETNLVAALVQIETALEMFKRTGAGHLVLISSVLGNKGVPGVKAAYAASKAGVSSLGESLRAEYAKGPIRVTVLEPGYIESEMTSKSASTMLMTDTDTGVAAMVRVIEKEAGRAAVPWWPWAPLVQLMRVLPPRLTRLFA
>NZ_AP022617.1|WP_011856950.1|18345_18735_+|phage-holin-family-protein
MGFLLRAAVTGVALWLVTQLVSGMEFVGGENTLQRVGIIFVVAVVFGLVNAIVKPIVQILSIPLYVVTLGLFHVVVNALMLWLTAWITEHTTHWGLYIDDFWWTAVWAGIVLSIVSWVLSVLSGNLIKR
>NZ_AP022617.1|WP_011856951.1|17562_18327_+|precorrin-6A-synthase-(deacetylating)
MTRRIHVIGIGAGDPDYVTAQAVAALNDTDVFFAMDKGSRTRGGQQADTKDDLVALRRLICERFITEPGYRFVEMPDPVRAKSGDYRQAVDEWHAARARLWAEAIERELDDDGVGAFLAWGDPSLYDSTLRILDRVAAHVDIEYDVIPGVTAIQALTARHRIPLNDVGEPVLITTGRRLREQGLTGAAVVMLDADCAFTGTPAQTRIWWGAYLGTADELLVSGTVGEVGERIVALRAEARERHGWIMDTYLLRP
>NZ_AP022617.1|WP_011561717.1|16482_17535_+|YihY/virulence-factor-BrkB-family-protein
MAEAASTKHRAPDPDDPRKPESPTDLTKPSAFYVLRKTAREFGHDQCTDLAAALTYYAVLSLFPAVLVMVSLLGVFGQGRRTTDALLDIVSDVAPASTVDTLRPTIEQLVESPSAGFALVIGILTALWSASGYVGAFGRAMNRIYEVAEGRPVWKLRPLQLVLTFAALLGAALVAFMLAVSGPVAEALGNAIGLGEAAVTAWSIGRWPVILLLVVVAVAVLYYATPNVQQPKFRWISLGAGLAILTWIVASVGFGFYVANFSSYNKTYGTLAGVIIFLLWLWITNLALLFGAELDAELERGRQLQAGLPAERELQLPPRDTRVIEKKEAAIEEDVERAKALRRSRGRDDG
>NZ_AP022617.1|WP_011561720.1|13183_13453_+|DUF4235-domain-containing-protein
MSVAKTMYKPLALASSIGGGLIAGKIFSQIWQLANPAGTEPPDPEDLQSSMKEIFVAAAIQGLIVGVVRAALARGQAKGFAALANENPE
>NZ_AP022617.1|WP_011856943.1|29395_30478_-|M23-family-metallopeptidase
MAAHRSSRSREGASTNARQRQGVSIPAERPAEVTDIIPFNEFGDLDDIDFRDSTAFDRDSQIIRAPELDDLHDTDDLIPLRLAIPAQFRAEGDADTPRRSRAYRESHTDVSDGAAATDIIDLRGRRAAHRKEAEGPIKSRLVIAAMAAGATAAGAYSMTQNTAPATTDTVLASGETTVEGASISGSVDGMQIVSVASTANTAVHHEEIQKAAAFAQERAEREARQMRPLYVMPTKGVWTSGFGYRWGVLHGGIDIAGPIGTPILAAADGVVIDVGPTAGYGAWVKLRHADGTVTLYGHLNTWSVSMGEQVMAGDQIATMGNRGNSTGPHLHFEVMVGGSNRIDPVGWLSKRGISTGSYVG
>NZ_AP022617.1|WP_011561705.1|30740_31904_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MDLFEYQAKELFAKHNVPTTPGRVTDTAEDAKAIAEEIGKPVMVKAQVKVGGRGKAGGVKYAATADDAFTHAQNILGLDIKGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGVEIEEVAATKPDRLARIPVDATKGVDEAFAREIAEKGHLPAEVLDAAAVTIAKLWEVFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRHPEHAEFEDRDATDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHNGVKPANFLDIGGGASAEVMANGLDVILNDSQVKSVFVNVFGGITACDAVANGIVKALEILGEEANKPLVVRLDGNRVEEGRKILADANHPLVVLAQTMDEGADKAAELANK
>NZ_AP022617.1|WP_011856942.1|31914_32817_+|succinate--CoA-ligase-subunit-alpha
MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQLVGGVNARKAGTTVSHVDKDGKDVELPVFGSVGEAMKETGADVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAYNVEKGQKTRIIGPNCPGIITPGEALAGITPANITGSGPVGLVSKSGTLTYQMMYELRDFGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKDNVSKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAQLAREILQNQ
>NZ_AP022617.1|WP_083045369.1|32962_34492_+|acetyl-CoA-acetyltransferase
MVDPRTPVIVGVGQFTERIDDDGYRGMSAVDLATEATRAALSDTGADTGAVAQAIEVFAGLRQFEICTPFADPPLGASDNYLRSVAKRVGADPARAVLESIGGNGPQKLMTEFAGAIAAGDIEVALVVGSEPGSTAKYFAKRDQKPDFTERVGGQLEDRGYGFEQYMSDYTVAHGLTGAPVQYGLLDNARRAAKGLGVAEYRREMAELFAPFSAVAAKNPYSSSPVERSVDEIVTVTDENRMICDPYPRLLVARDTVNQGAAAIVMSVAAARRLGVPEGKWVYLRGHADQTEQDLLDRERLGVSVSAKQAVAEALRVAGIGIDDVATFDLYSCFPFPVFAVCDEFGLDADDPRGLTLTGGLPYFGGPGNSYSLHGIAETVAAMRDNPGSYGLVGANGGVMSKYSVGVYSTEPADWAADRSKELQADIAGLPKVPVTRHADGRGTVETYSVRYDWPVRTGIIIGRLDADGSRFLAISEDDDLVALMSDGDPLGAAIEVRPDGDKNRATSA
>NZ_AP022617.1|WP_011561702.1|34563_35412_-|LLM-class-F420-dependent-oxidoreductase
MDFGLVLFTSDRGIAPATAAKLADDHGFRTFYVPEHTHIPIKREAAHPTTGDETLPDDRYMRTLDPWVSLGTACAVTSRVRLSTAVALPVEHDPITLAKSIATLDHLSGGRVSLGVGFGWNTDELADHNVPPGRRRTMLREYLEAMRALWTQEEASYEGEFVNFGPSWAWPKPVQAHIPVLVGAAGTEKNFKWIAKSADGWITTPRDFDIDAPVKLLQDTWAGAGRDGAPQIVALDFKPDPDKLARWRELGVTEVLFGLPDKSEAEVAAYVERLAGKLSALV
>NZ_AP022617.1|WP_083045370.1|35512_36643_+|dimethyl-sulfone-monooxygenase-SfnG
MSTERIADHVKFAYWVPNVSGGLVTSTIEQRTDWNYEYNKKLAQTAENNGFEYALSQVRYEASYGAEYQHESTSFSLALLLATERLKVIAAVHPGLWQPAVLAKLGATADQLSGGRFAVNVVSGWFKHEFTHLGEPWLEHDERYRRSAEFLQVLRKIWTEDDVDFRGDFYRIHDFTLKPKPVNTPERPNPELFQGGNSTAARRNGGRYADWYFSNGKDFDGITEQIVEVRDHAREVGREVKVGLNGFIIARDTEKEAKDTLREIIEKANKPAVEGFRSAVQQAGNSTADKKGMWADSSFEDLVQYNDGFRTQLIGTPEQIAERIAAYRKRGVDLILGGFLHFQEEIEYFGARVLPLVREIEASDASSADAPALATV
>NZ_AP022617.1|WP_064872365.1|36788_37670_+|DUF5336-domain-containing-protein
MTYSPGSPGFPPANQPTTQFSAPTQHFGKVPEQPAAGEGPNKLPAYLLMVVAALGLLVYLCNFGPIFEVSASDFLGQGGTVSGSTLGIGLAVISALTAGLLAGVTLLSKGRTYVAIAAVLSVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAVAALLFDTGVLTPPTPRPKYDQQQYGQYGGPGPYYGQPHSGAHQPQQLHTGSHQQAPQQQRPGYPSQYGGGYPGAGGPSTGGFQSSGQQSGPPTPPTGFPTYGQPQQQGGGSAQGGSGQGQQPPTSQQSGQNPS
>NZ_AP022617.1|WP_064872367.1|37727_39116_+|hypothetical-protein
MDNRPVGTRQARELLRVAFGPSVVALVVIAAVTLLQLLIANSDMTGAFGAIASMWLGVHLVPISIGGSELGAMPLMPALMMVWGTARTTAAATPPHGSWFVTRWVVASALGGPLLIAAIALAVIHDAASVLTELQTPSALRAFGGVLVVHLIGAAIGVASRVGRRTVLTSPLPDWLPDAFRAAAAGVLALAGLCGVVIAGSLVVHWSTMHELFAITDSVFGQFSLTVLSLLYLPNVVVGAAAVAVGSSAHIGLATFSSFTVLGGDVPALPVLAAVPEPPLGPVWVALLIVGAAAAVAVGQQVARRPAPIHIAAAKLVVASAVAALTMALLGEAGGGRLGNFGQVGVDQTTFGPGVFLWFMVIGGLTVAMSGGIVRRPRRVRVTEPEPEPEPEAAPEQDLDDAETGPIVDPVAAAPEPVTAEPVAEPVPGEPDPALDPEEHFIVDDAGSPPTDSAPTDGEPRR
>NZ_AP022617.1|WP_011561698.1|39135_39765_+|phosphoribosylglycinamide-formyltransferase
MQQPLRVPPSAPARLVVLASGTGSLLASLLESTVDDYPARVVAVGTDRTCAALDIAAAAQVPTYTVRLGEYPDRTAWDAAVTAATAEHEPDLVVSAGFMKILGPEFLNRFPGRVVNTHPALLPAFPGAHAVADSLAYGVRVTGCTVHLVDAGMDTGPILAQEAVAVRDGDDEATLHERIKVVERRLLVDVLAAMAQRGVTWTGRKATIG
>NZ_AP022617.1|WP_064872369.1|39761_41345_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MSGDQGQAGAKRPIRRALISVYDKTGLIDLARGLHEAGVDIVSTGSTAKTIADKGIPVTPVEFVTGFPEVLDGRVKTLHPHIHAGLLADTRKPEHVEALAKLGIAPFDLVVVNLYPFSETVESGASVDECVEQIDIGGPSMVRAAAKNHPSVAVVVEPNGYDGVLAAVRTGGFTLAERKILASLAFRHTAEYDVAVASWMGSTLAPEEPAQKLPAWVGGTWRRAAVLRYGENPHQQAALYRDATAWPGLAQAEQLHGKEMSYNNYTDADAAWRAAFDHEEICVAIIKHANPCGIAISSVSVADAHRKAHECDPLSAFGGVIATNSSVSVEMAETVADIFTEVIVAPAYEPGAVEILSRKKNIRILVAAQPPTTGTELRPISGGLLLQQRDALDADGDDPVNWILATGEPADPATLANLKFAWRSCRAVKSNAIVVVADGATVGVGMGQVNRVDAARLAVQRAGDRVRGAVAASDAFFPFPDGLETLTEAGVKAIVHPGGSMRDDVVTEAAAKAGISLYLTGARHFAH

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Crispr_ID: NZ_AP022617_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022617_2

993667-993743

Orphan

Consensus_repeat	Method
GCCGGCCAAGAAGGCCGCCAAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022617_2

>merge|NZ_AP022617|2|993667-993743|CRISPRCasFinder
GCCGGCCAAGAAGGCCGCCAAGAAGGCCGCCAAGAAAACACCGGCGAAGAAGACGCCGGCGAAGAAGGCCGCCAAGA

>NZ_AP022617|2|2|993667-993743|CRISPRCasFinder
GCCGGCCAAGAAGGCCGCCAAGA	AGGCCGCCAAGAAAACACCGGCGAAGAAGAC
GCCGGCGAAGAAGGCCGCCAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022617.1\|WP_011561010.1\|983336_983822_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239535
NZ_AP022617.1\|WP_011856185.1\|1000700_1005560_+\|NAD-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|377452
NZ_AP022617.1\|WP_064876153.1\|1006622_1008242_-\|DUF3459-domain-containing-protein	unknown	unknown	gnl\|CDD\|200471
NZ_AP022617.1\|WP_011560994.1\|1005966_1006626_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022617.1\|WP_011561004.1\|988909_989353_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|378988
NZ_AP022617.1\|WP_011561000.1\|993807_996180_+\|glycerol-3-phosphate-1-O-acyltransferase	unknown	unknown	gnl\|CDD\|179567
NZ_AP022617.1\|WP_011856191.1\|982179_983340_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173847
NZ_AP022617.1\|WP_064872067.1\|984742_985813_+\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|213783
NZ_AP022617.1\|WP_011856189.1\|989521_990403_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_AP022617.1\|WP_064872069.1\|985814_986864_+\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223101
NZ_AP022617.1\|WP_011560992.1\|1008257_1008653_-\|globin	unknown	unknown	gnl\|CDD\|381280
NZ_AP022617.1\|WP_064872065.1\|983818_984637_+\|CoA-ester-lyase	unknown	unknown	gnl\|CDD\|225184
NZ_AP022617.1\|WP_011560991.1\|1008794_1009463_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_AP022617.1\|WP_083045432.1\|1005556_1005970_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_AP022617.1\|WP_011560999.1\|996206_998204_+\|bifunctional-copper-resistance-protein-CopD/cytochrome-c-oxidase-assembly-protein	unknown	unknown	gnl\|CDD\|378238
NZ_AP022617.1\|WP_011560998.1\|998349_998856_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|235626
NZ_AP022617.1\|WP_083045430.1\|986860_988015_+\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
NZ_AP022617.1\|WP_011856190.1\|988016_988769_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|180298
NZ_AP022617.1\|WP_011560997.1\|998932_1000606_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_AP022617.1\|WP_011856188.1\|990647_992129_+\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	unknown	unknown	gnl\|CDD\|274360

Protein	Function_ID	Function_description	E-value
NZ_AP022617.1\|WP_011561010.1\|983336_983822_+\|MaoC-family-dehydratase	gnl\|CDD\|239535	cd03451, FkbR2, FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.	4.88217e-71
NZ_AP022617.1\|WP_011856185.1\|1000700_1005560_+\|NAD-glutamate-dehydrogenase	gnl\|CDD\|377452	pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase. This family consists of several bacterial proteins which are closely related to NAD-glutamate dehydrogenase found in Streptomyces clavuligerus. Glutamate dehydrogenases (GDHs) are a broadly distributed group of enzymes that catalyze the reversible oxidative deamination of glutamate to ketoglutarate and ammonia.	0
NZ_AP022617.1\|WP_064876153.1\|1006622_1008242_-\|DUF3459-domain-containing-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_AP022617.1\|WP_011561004.1\|988909_989353_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|378988	pfam12900, Pyridox_ox_2, Pyridoxamine 5'-phosphate oxidase. Pyridoxamine 5'-phosphate oxidase is a FMN flavoprotein that catalyzes the oxidation of pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P (PLP). This entry contains several pyridoxamine 5'-phosphate oxidases, and related proteins.	2.66617e-25
NZ_AP022617.1\|WP_011561000.1\|993807_996180_+\|glycerol-3-phosphate-1-O-acyltransferase	gnl\|CDD\|179567	PRK03355, PRK03355, glycerol-3-phosphate 1-O-acyltransferase.	0
NZ_AP022617.1\|WP_011856191.1\|982179_983340_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	4.27594e-162
NZ_AP022617.1\|WP_064872067.1\|984742_985813_+\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	gnl\|CDD\|213783	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit. Members of this protein family are the alpha subunit of the E1 component of pyruvate dehydrogenase (PDH). This model represents one branch of a larger family that E1-alpha proteins from 2-oxoisovalerate dehydrogenase, acetoin dehydrogenase, another PDH clade, etc. [Energy metabolism, Pyruvate dehydrogenase].	2.2335e-161
NZ_AP022617.1\|WP_011856189.1\|989521_990403_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	3.20262e-24
NZ_AP022617.1\|WP_064872069.1\|985814_986864_+\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	6.00862e-163
NZ_AP022617.1\|WP_011560992.1\|1008257_1008653_-\|globin	gnl\|CDD\|381280	cd14771, TrHb2_Mt-trHbO-like_O, Truncated hemoglobins, group 2 (O); Mycobacterium tuberculosis hemoglobin O like. The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or the T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. TrHbs are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). This group includes a Mycobacterium tuberculosis TrHb2, Mt-trHbO, encoded by the Mycobacterium tuberculosis glbO gene, which is expressed throughout the Mycobacterium growth phase. It also includes a TrHb2 from the thermophilic Thermobifida fusca ( Tf-trHb) which has a high thermostability and at the optimal growth temperature for Thermobifida fusca (between 55 and 60 degrees C ), it is capable of efficient O2 binding and release. Tf-trHb shares a relatively slow rate of oxygen binding with Mt-trHbO.	1.95994e-62
NZ_AP022617.1\|WP_064872065.1\|983818_984637_+\|CoA-ester-lyase	gnl\|CDD\|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	9.16751e-70
NZ_AP022617.1\|WP_011560991.1\|1008794_1009463_+\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	7.12499e-27
NZ_AP022617.1\|WP_083045432.1\|1005556_1005970_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	2.07949e-22
NZ_AP022617.1\|WP_011560999.1\|996206_998204_+\|bifunctional-copper-resistance-protein-CopD/cytochrome-c-oxidase-assembly-protein	gnl\|CDD\|378238	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). Members of this family are the CtaG protein required for assembly of active cytochrome c oxidase of the caa3 type, as found in Bacillus subtilis.	1.35635e-89
NZ_AP022617.1\|WP_011560998.1\|998349_998856_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|235626	PRK05853, PRK05853, hypothetical protein; Validated.	1.4492e-81
NZ_AP022617.1\|WP_083045430.1\|986860_988015_+\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	2.13462e-143
NZ_AP022617.1\|WP_011856190.1\|988016_988769_-\|enoyl-CoA-hydratase	gnl\|CDD\|180298	PRK05870, PRK05870, enoyl-CoA hydratase; Provisional.	2.37255e-119
NZ_AP022617.1\|WP_011560997.1\|998932_1000606_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_AP022617.1\|WP_011856188.1\|990647_992129_+\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	gnl\|CDD\|274360	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity].	6.27263e-114

>NZ_AP022617.1|WP_011856188.1|990647_992129_+|wax-ester/triacylglycerol-synthase-family-O-acyltransferase
MATSDVPELDAAGLPEELSPFDQILHRGEANPRTRSGILTIEILDTTPDWDRFRTRFEHASRKVLRLRQKVVTPTLPTAAPRWVVDPDFNLDFHVRRVRIPEPGNMRQLIDLAEIALQSPLDISRPLWTATLVEGLEGGRAATMLHFSHAVTDGVGGVEMFASVYDLERDPPPSDVPPLPIPQDLSPNDLMRQGLNRLPFSLLGGVRNALGGAASAVGKVVRDPVSSVGGVVDYARSGARVVGSVAEPSPLLRRRSLSTRSEAIDMSLGDLHKAAKAAGGSINDAYLAGVCGALRLYHDAFGLPVATLPMAVPVSLRSDADPAGGNRFVGVNLAAPIGVTDPRERITKLRAQMTRKREERALDMIGAVAPVASLLPDTVLEAMAGSVVNSDVQASNVPVYAGDTYIAGAKILRQYGIGPLPGVAMMVVLVSRSGFCTVTARYDRASITDPDLFAECLLAGFDEVLAIGGPGRASPASFTLESEKPSPNGSAPQ
>NZ_AP022617.1|WP_011856189.1|989521_990403_+|universal-stress-protein
MSTAVHPGIVVGVDGSVGSHAAVRWSAREAVMRRVPLVLVNVLATDVTAAWAMAVPAAPLPAQYFESREQDARAVLAEAETVAKDAGAVDVTTELVQAAAVPGLVDVAKEADMLVVGTRGHGAVKRLLLGSVTTGLLHHSRCPVAVIGPDADQPSETGPVVVGVDGSRASQRAVEIAFEEASMRGVDLVALHSWSDRNESLHPYVDWATVRAPAEETLAVSLAGWCERYPDVTVHRESVFDRPVEHLLERSESAQLLVVGSHGRGGFAGMLLGSVSTAVVQAARSPVIVARGR
>NZ_AP022617.1|WP_011561004.1|988909_989353_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MTMTKGQQLDVLNRRQCLDLLEGVRVGRLVFTEDGLPAVHPVNFRMKRDDVIIRVAGGAKLAAANKNMVVAFEADELDPDLRTGWSVTIVGTAHPISDVDELVEVSGTFLEPWVEGRRDHFIRIEAQKMTGRRFREHGLPKYQSAGE
>NZ_AP022617.1|WP_011856190.1|988016_988769_-|enoyl-CoA-hydratase
MADSVLMQVDDHVALVTVNDPDRRNAVTFEMSAALRAAVDAAEADPGVHALIVTGAGKAFCAGADLTALGEATEDGLRRIYDGFLAVAHCPLPTIAAVNGAAVGAGLNLALAADVRIAGPNALFDPRFQKLGIHPGGGATWMLQRAVGPEVARAALLFGMRFDAEAAVRHGLALEVADDPVATARQLAAGPAAAPREVVLATKASMRATASPGTVDTEQHRTAVDIELGPQAASIESPEFARRLAAAKRK
>NZ_AP022617.1|WP_083045430.1|986860_988015_+|2-oxo-acid-dehydrogenase-subunit-E2
MTVQDFLVPDLGEGLQDATITSWAVDVGDEVELNQTLCTVETNKAEVEIPSPYAGRVVERGGDEGQTLDVGSLLVRIATSADEPVPQRKSVLVGYGADEAMDTSRRRSARPRAKPPVRKLAAELDVDLNAVSASGPDGVVTREDVQRAAEGWAPAAEQVAVRGVQAEMVRRMSLSRREIPDAHASVTVDGSALLRLRDRLLGTDPPVTPFVLTLRLLTLALRHHPALNATWIETAEGPQIHRHTAVHVGFGVAAPRGLLVPVIADAQDMTTRELAAAVGRLVAEARAGRVRPAELSGSTFTVSNFGALGLDEGVPVINHPEAAILGMGSLKPRAVVVDGEVVARPTMTLTCAFDHRIADGATVAAFLGELRELVEAPELALLDL
>NZ_AP022617.1|WP_064872069.1|985814_986864_+|alpha-ketoacid-dehydrogenase-subunit-beta
MTQLIERPTGADDHDRFITDVPTVTELTMVQAINRALHDAMAADDRVLVFGEDVATLGGVFRVTDGLSETFGEQRCFDTPLAESAIVGIAIGMAIRGFVPVPEIQFDGFAAPAFDQVVSHLAKYRMRTRGDVDMPVTIRIPSFGGIGAVEHHSESTETYWLHTAGLKVVTPSSPTDAYWLLRHAIAARDPVIYLEPKRRYWARGAVDTTEPGLPIGRAAVRREGTDVTVLTYGPLVATALSAAEHAAAESDWSLEVVDLRSLNPLDFDTVAASVGKTGRAVVMHEGPRTLGFGAELAARISEELFYDLEAPVLRATGFDTPYPPARLEKLWLPGVDRLLDCVQRTLEMP
>NZ_AP022617.1|WP_064872067.1|984742_985813_+|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha
MAGVELDPVQLVGADGAPSAQQRYSRDLPPETLAWLYETMVVTRDLDTEFVHLQRQGELALYASCRGQEAAQVGAAACLRKTDWLFPQYREIGAFLLRGIAPAQMAAVWRGKWHGGLEFTAKCCAPISIPIGTQGLHAVGAAMAAQRLGEDSVTVAFLGDGATGEGDVHEAMNLAAVYQVPCVFFVQNNQWAISVPVQRQVAGPSIAHRAAGYGMPGVRVDGNDVLACFAVMSEAAARARAGGGPTLIEAVTYRLGPHTTSDDPTRYRDQSEVDRWRARDPIPRYRTYLQGAGVWSERLEERVAARSKRLRAELRDAVVGAPDFDVSEVFDTVYHDITPDLAEQRDRLLAELAKEA
>NZ_AP022617.1|WP_064872065.1|983818_984637_+|CoA-ester-lyase
MTLGNNGPGWLFCPADRPERFEKAAAAADVVILDLEDGVAARDREAARAALVDTPLDPSRTVVRVNPTTTPDHALDLQALARTDYTTVMLAKTESAEQVSALAPLEVVALIETPLGALTVVESSRVDNTVAVMWGAEDLLAVTGGTSSRWPDGSYRDFAVHVRSRSLLAAKAYGRMALDSVYLDIKDLDGLRAETDDAVAVGFDAKVAIHPTQVAVIRDGYRPTDEQVDWARRVLDTARDERGVFQFEGIMVDAPVLRRAERIVALAPHPGS
>NZ_AP022617.1|WP_011561010.1|983336_983822_+|MaoC-family-dehydratase
MKRVVTQRGLWFEEFETGVVYQHRPGRTITEADNVLFTTLTMNTQALHLDAAFSDALPPFNQRLVNSMFTLSTLVGLSVAQLTQGTIVGNLGFGEVAFPKPLFHGDTLYAETEVLEKRESKSRPGEGIVTFSHVGRNQHGDVVATASRKTMVRKRPEGDPQ
>NZ_AP022617.1|WP_011856191.1|982179_983340_+|acyl-CoA-dehydrogenase-family-protein
MTDFLASGTLPDHYEQLAKTVRDFARSVVAPVAAKHDAEHSFPYEVVRGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGKVDQSVAITLEAGVSLGAMPVYRFGNEDQKREWLPQLTSGQALAAFGLTEPGGGSDAGATKTTAKSDGSTWVINGSKQFITNSGTDITKLVTVTAVTGEVDGRKEISSILVPVPTQGFTAEPAYNKVGWNASDTHPLSFDDVRVPEENLLGERGRGYANFLRILDEGRIAIAALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIAFKIARMEARAHTARAAYYDAAALMLSGKPFKKQAAIAKLVASEAAMDNARDATQIFGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLMLIGRELGL
>NZ_AP022617.1|WP_011561000.1|993807_996180_+|glycerol-3-phosphate-1-O-acyltransferase
MKLPDDYYASFTTTDDALVLAAASSPAEVELLDEWLAAQRHDNPDVEVDVLQLPVDGEPSPGVLAKLVEELEADEDRTVVPVRVFWVPAGLPTRSKVVALISGRDTYRPPEILQRRILKRDRTRARVIAGEPAKVSELRQQWHDHTVAENPRDFAHFVVRRAVLAIERVEYRLLGPEYKSPRLVKPEILASTKFRAGLEKIPGATVDEAGKMLDELATGWSRVSVDLIPNLSRLIVKRGFDTNIDYDHTEIARLRSDLENHPAVLLFSHRSYLDGGVVPVAMQENRLPPVHMFAGINLSFGFMGPLLRRSGVIFIRRNVAGDPLYKYVLKEYVGYVVQKRFNLSWSIEGTRSRTGKMLPPKLGLLAYVADAYLAGRSDDILLQPVSISFDQLHEISEYADYARGGEKTPEGLSWLYNYIKAQGERSYGKIYVRFPEAVSMRQYLGEPGGPIATDESAKRLAMQKMAFEVAWRILQVTPINATALVSGLLLTTRGVALTLDQLHHTLQDGLDYLMRKDKPLTNSALRLRTPEGVQAAVDALSNGHPVTKVDSGREPVWYIAADDEHEAAFYRNTLIHAFLETSIVELALGYAARADGDPLEAFWTQAARLRDLLKFDFYFADSAAFREHVVEEMSWRADWESQVAAGGERIDALLREKRPLMAGAMLRPFFEAYEILASALRDAPADIEEKDLIKRAMGLGRQYVAQDRVRSNESVSALLFSTARQVAADQHLLESGPDLEVRRTAFCEELGGILADMDKVDRYAREQFMAREAERHRAKTGRAAVNRPAG
>NZ_AP022617.1|WP_011560999.1|996206_998204_+|bifunctional-copper-resistance-protein-CopD/cytochrome-c-oxidase-assembly-protein
MTTVAVKTRPSAVWPVLVGVAALAGLTAAGIGALSLADALTATGLPDPGPVTTYGLPFVRAAGEIAAVTAVGAFLFAAFLVPPQANGVLDVAGYRALRLGTAASAVWTVCAVLLVPLTVSDVSGQALRDHLNPVEIWSVAGQVDVASAWRWTALLAAVVTLAALPVLRWAWTPPLFAGSLLTLMPLALTGHSSSGGAHDLATNSLVIHLVAGALWAGGLLALLVHALRGGEHGDVAARRFSAVALWCFVAMALSGVINALVRMSPADLFRTEYGGLVLAKAAALTVLGVLGYLQRRKGVAGLQADPGARGPLVRLALVEAVLFGATFGIAVGLGRTPPPPPGRQPTPVEVEIGYDLAGPPTVTRILFDWRFDLILGSAAIILALVYLAGWWRLRRRGDAWPAGRTVAWLLGCATLLITTSSGLGRYMPAMFSVHMVAHMLLSMLVPILLVLGAPVTMALRALPVAGKGKPPGPREWLLAALHSRVSRVLTHPIVALALFVAGFYGLYFGGLFEAAVDDHAAHVVMNIHFLLSGYLFYWVVIGVDPTPRRIPQLAKLAIVFASLPLHAFFGVVLMGMNSVLAEDFYRSLHLSWHNDLLADQKLGGSIAWAAGEIPLVLVLLALLIQWRRSDDRDAKRLDRAAERDHDADLAAYNAMLAELARRDGR
>NZ_AP022617.1|WP_011560998.1|998349_998856_+|single-stranded-DNA-binding-protein
MFETPITVVGNIVNNPYRQRVGDQEVMRFRVASNSRRRTADGSWEPGNSLFVSVSCWGKLVTGVGASLGKGDAVIVVGHVHTSEYDDREGVRRSSVEVRATAVGPDLSRCVARVETLRQSGPAGAGEAPEAPETGGEVADGADAEAGHTGPGTGPGDPDAAEALPLSA
>NZ_AP022617.1|WP_011560997.1|998932_1000606_+|energy-dependent-translational-throttle-protein-EttA
MAEFIYTMRKVRKAHGDKVILDDVNLNFLPGAKIGVVGPNGAGKSSVLRIMAGLDTPNNGDAYLAPGASVGILQQEPHLDETKTVRENVEEGVPIKGKLNRYNEVAELMATDYSDELMEEMGRLQEELDAADAWDIDSQLEQAMDALRCPPPDEPVTHLSGGERRRVALCKLLLSKPDLLLLDEPTNHLDAESVLWLEQHLASYKGAILAVTHDRYFLDNVAEWILELDRGRAYPYEGNYSTYLEKKAERLEVQGKKDQKLQKRLKEELAWVRSGAKARQAKNKARLGRYEEMAAEAEKSRKLDFEEIQIPTPPRLGNVVVEVEHLDKGFEGRTLIKDLSFTLPRNGIVGVIGPNGVGKTTLFKTIVGLEQPDSGVVRVGDTVKLSYVDQNRAGIDPKKNVWEVVSDGLDYIEVGQNEIPSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKEGGNLILLDEPTNDLDVETLSSLEHALEQFPGCAVVISHDRWFLDRTCTHILAWEGDDDNEAKWFWFEGNFGAYEENKVQRLGAEAARPHRVTHRRLTRD
>NZ_AP022617.1|WP_011856185.1|1000700_1005560_+|NAD-glutamate-dehydrogenase
MTGTGADAARNPSTETLDRLAKAYAETYRGPQQGESAADTATSGAVDPADMLESSELVRAHHRLAERRQAGETLVAAYGVDGADDAEGLGPALQVVTDQAPTLIDSVTVLLHRLGVAYRAIMNPVLRVRRGPAGELLEARPASETADGEGDDEAWIHIELSESADRSSVAAARRMLPRILADARQVSIDGSAMVARLQSLANDIEADTRGHFTAPERKDVAALARWLADGHFILIGCQRCPVTATESSVEADSRLGVLRLREDVLAPLTREGDLLALAQATIPSYVRYGANPYVVVIREEVIREEGAGGDGYDAVEHRFVGLFTVAAMNANVLGIPLISRRVNEALAIAQRDPSHPAQLLLDIIQTIPRPELFALQADELLDMAMAVIDLGSRRRTLLFLRADSLAHFIAALVYLPRDRYTTAVRLEMQDILVRELGGESIDYSARVSESPWAVVHFTVRLPDGSRPGDVDVSPENEERIQRELTEAARTWGDRLLGAAASGDLRQDAAEHYAGAFPEDYKQAVTPAEAINDIAIIEALQDNSVKLVFAEGGKDRVGKLTWYLGGRSASLSQLLPMLQSMGVVVLEERPFTVTRADGLAVWIYQFKIRPHHTMPESVGDGSDRDATAARFADAVTAIWNGRTEIDRFNELVLRAGLSWQQVMVLRAYAKYLRQAGFPYSQSFIESVVNDNPHTARSLVELFEALFDPTESAKERDAQSAAAAVAADIDALTGLDTDRVLRAFASMVQATLRTNHFVARAESARARDVFAIKLDPGLIDELPLPRPKFEIFVYSPRVEGVHLRFGYVARGGLRWSDRREDFRTEVLGLVKAQAVKNAVIVPVGAKGGFVVKQPPVPTGDAAADRDAQRAEGVACYKLFISGLLDITDNVDKISGEVVAPPDVVRRDGDDAYLVVAADKGTATFSDIANEVAKSYGFWMGDAFASGGSVGYDHKAMGITAKGAWESVKRHFREMGVDTQSEDFTVVGIGDMSGDVFGNGMLLSEHIRLVAAFDHRHVFLDPAPDAATSFEERRRLFDLPRSSWEDYDRSLISEGGGVYSREHKSIPVSPQVREVLGLDDGVEEMTPPALIKAILKAPVDLLWNGGIGTYVKAEAESEGDVGDRANDPVRVNANQVRAKVIGEGGNLGVTSRGRIEFDLAGGRINTDALDNSAGVDCSDHEVNIKILIDSLVTAGKVSADERTDLLLSMTDEVGELVLSDNRDQNDLMGTSRANAAGLLPVHSRMITHLVQQHGMNRELEALPSDKEIRRRLDAGMGLTSPELATLMAHVKLALKADLLDSELPDQEAFAARLPRYFPSTLRDQFAADTRSHQLRREIVTTMLVNDVVDTSGITYAYRISEDAGVGPIDAVRSFVAVSAIFRVGDVWRQIRAANLPVAVSDRMTLDLRRLIDRAARWLLNYRPQPLAVGAEINRFADKVAALTPRMEEWLRGDDAAIVDKEAGEFCSHGASKELAYSVATGLYQFSLLDVIDIADIDDRDPAEVADTYFALMDHLNTDSLLTAVSQLPRGDRWHSLARLAIRDDIYGSIRSLCFDVLAVGEPDENGEEKIAEWEMTNGSRVARARRTLAEIYEDGERDLATLSVAARQIRSMTRSSGTGSSG
>NZ_AP022617.1|WP_083045432.1|1005556_1005970_+|acyl-CoA-thioesterase
MTAGFVAPVHVRWSDIDMYQHINHATMVTILEEARIPFLREPFEARITDIGLLIADVHITYKGQLRLIDSPLQVTMWSKRVRAVDFTIGYEVRSMGAPADSKPSVIAETQLAAVHIEEQRLERLTPEQRTYLQRYLR
>NZ_AP022617.1|WP_011560994.1|1005966_1006626_+|hypothetical-protein
MTGHERGLWLTDPGHRDDLATFAERAVRLDGAAVVRLRERAGGGVVAFVATGFDVLASRVVSGRLRPKDLCAGADALVAGLAGIDASGFVDTGFPMDSAWRGAVPSETGFTHLDDVPARVMLDLVTQGGALARQHSGAHGPPSSLLDQEVIAVSGDGESVGVPMRCVFALTAMGFLPQSSAALDAGDIVRIRVSPTWLRIDAPFGSVLRRRGDPAVVLR
>NZ_AP022617.1|WP_064876153.1|1006622_1008242_-|DUF3459-domain-containing-protein
MGAMAHPPTADQPWWSRAVFYQVYPRSFHDSDGDGVGDLDGVTAKLDYLSELGVDALWLNPVTVSPMADHGYDVADPRDIDPLFGGIDALDRLIAAAHDRGIRITMDLVPNHTSSAHPWFQAALAAGPGSAQRERYIFREGTGPDGLLPPNNWISVFGGPAWTRIVEPDGQPGQWYLHLFDPEQPDLNWDNPEVFEDLEKTLRFWLDRGVDGFRIDVAHGMAKPPDLPDMEIAENRMLAETASDPRFDHQGVHDIHRNIRSVLDDYPGAVAVGEVWVYDNAAFAAYLRADELHLGFNFRLVRADFDADEIHDAIENSLAAVALENATPTWTLSNHDVEREVTRYGGGALGLARARAMALVMLALPGVVFVYNGEELGLPNVDLPDEVLQDPVWERSDRTERGRDGCRVPMPWSGDAPPFGFSTTADTWLPMPAEWSSLTVERQLAEPDSVLHFFRRALRLRRDRCGVDGATLTQLSAEDGVVTFRTDGGLTCVLNAGERPVDLPPGEVLLASAPLQAPSPSLRSTQDRRLPPDTAAWVV
>NZ_AP022617.1|WP_011560992.1|1008257_1008653_-|globin
MTQPTRSFYDEVGGHETFRAIVARFYELVREDEILRPLYPDDELEAAEVRLRMFLEQYWGGPRTYSDQRGHPRLRMRHAPFRIGYIERDAWLRCMHTAVAEIDAVTLDDEHRRELLAYLEMAAQSMVNSPF
>NZ_AP022617.1|WP_011560991.1|1008794_1009463_+|HNH-endonuclease
MAHRKKSPSRPTGHKRAAAVGPSGPAASARVLHSVEIHGGETAASIHDGSLWGRRRVLLLNSTYEPLTALPLRRAVVMLICGKADVVHEDPSGPVIHSATRSISVPTVIRLRSFVRVPYRARVPMTRAALMHRDRFRCAYCGAKADTVDHVVPRSRGGDHSWENCVAACAPCNHRKADHLLAELGWTLRHVPLPPKGQHWRLLSTVKELDPAWMRYLGEGAA

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Crispr_ID: NZ_AP022617_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022617_3

1629612-1629694

Orphan

Consensus_repeat	Method
CGCCTCTGCGACACCGCCGTCGGTGG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_AP022617_3

>merge|NZ_AP022617|3|1629612-1629694|CRISPRCasFinder
CGCCTCTGCGACACCGCCGTCGGTGGGAATTCCACCGGCCGGCTCGCTCAACGGCACCGCCTCTGCGACCCCGCCGTCGGTGG

>NZ_AP022617|3|3|1629612-1629694|CRISPRCasFinder
CGCCTCTGCGACACCGCCGTCGGTGG	GAATTCCACCGGCCGGCTCGCTCAACGGCAC
CGCCTCTGCGACCCCGCCGTCGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022617.1\|WP_041925081.1\|1628262_1629090_+\|DUF4239-domain-containing-protein	unknown	unknown	gnl\|CDD\|372881
NZ_AP022617.1\|WP_011855907.1\|1637378_1637879_-\|DUF427-domain-containing-protein	unknown	unknown	gnl\|CDD\|377265
NZ_AP022617.1\|WP_011855920.1\|1621160_1622318_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|179560
NZ_AP022617.1\|WP_011855917.1\|1623442_1625602_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_AP022617.1\|WP_011560385.1\|1635545_1635992_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_AP022617.1\|WP_011855914.1\|1627673_1628135_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319917
NZ_AP022617.1\|WP_083045269.1\|1634553_1635243_-\|UdgX-family-uracil-DNA-binding-protein	unknown	unknown	gnl\|CDD\|274850
NZ_AP022617.1\|WP_011855915.1\|1627214_1627574_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_AP022617.1\|WP_011560398.1\|1619643_1621083_+\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|236126
NZ_AP022617.1\|WP_011855904.1\|1641518_1643000_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224983
NZ_AP022617.1\|WP_011855906.1\|1637868_1638546_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_AP022617.1\|WP_011855911.1\|1632252_1633608_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_AP022617.1\|WP_082947923.1\|1622881_1623295_-\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|225188
NZ_AP022617.1\|WP_041925316.1\|1638634_1641529_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_AP022617.1\|WP_011855921.1\|1618934_1619519_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_AP022617.1\|WP_041925079.1\|1643052_1644222_-\|winged-helix-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377630
NZ_AP022617.1\|WP_083045270.1\|1636073_1637375_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_AP022617.1\|WP_011855919.1\|1622322_1622868_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_AP022617.1\|WP_083045266.1\|1625646_1627044_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341045
NZ_AP022617.1\|WP_011855910.1\|1633723_1634578_+\|thioesterase-family-protein	unknown	unknown	gnl\|CDD\|224857

Protein	Function_ID	Function_description	E-value
NZ_AP022617.1\|WP_041925081.1\|1628262_1629090_+\|DUF4239-domain-containing-protein	gnl\|CDD\|372881	pfam14023, DUF4239, Protein of unknown function (DUF4239). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 254 and 270 amino acids in length.	2.80196e-07
NZ_AP022617.1\|WP_011855907.1\|1637378_1637879_-\|DUF427-domain-containing-protein	gnl\|CDD\|377265	pfam04248, NTP_transf_9, Domain of unknown function (DUF427). This domain contains a beta-tent fold.	4.66479e-38
NZ_AP022617.1\|WP_011855920.1\|1621160_1622318_+\|dephospho-CoA-kinase	gnl\|CDD\|179560	PRK03333, coaE, dephospho-CoA kinase/protein folding accessory domain-containing protein; Provisional.	0
NZ_AP022617.1\|WP_011855917.1\|1623442_1625602_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_AP022617.1\|WP_011560385.1\|1635545_1635992_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	2.65332e-25
NZ_AP022617.1\|WP_011855914.1\|1627673_1628135_+\|VOC-family-protein	gnl\|CDD\|319917	cd07254, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.38782e-52
NZ_AP022617.1\|WP_083045269.1\|1634553_1635243_-\|UdgX-family-uracil-DNA-binding-protein	gnl\|CDD\|274850	TIGR03914, SPO1_DNA_polymerase-related_protein, uracil-DNA glycosylase family domain. This model represents a clade within the uracil-DNA glycosylase superfamily. Among characterized proteins, it most closely resembles the Thermus thermophilus uracil-DNA glycosylase TTUDGA, which acts uracil (deamidated cytosine) in both single-stranded DNA and U/G pairs of double-stranded DNA. This domain may occur either as a stand-alone protein or as the C-terminal domain of a fusion with another domain that always pairs with a particular radical-SAM family protein.	1.38691e-77
NZ_AP022617.1\|WP_011855915.1\|1627214_1627574_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	2.44376e-14
NZ_AP022617.1\|WP_011560398.1\|1619643_1621083_+\|30S-ribosomal-protein-S1	gnl\|CDD\|236126	PRK07899, rpsA, 30S ribosomal protein S1; Reviewed.	0
NZ_AP022617.1\|WP_011855904.1\|1641518_1643000_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	6.08696e-97
NZ_AP022617.1\|WP_011855906.1\|1637868_1638546_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	4.33522e-47
NZ_AP022617.1\|WP_011855911.1\|1632252_1633608_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.5145e-45
NZ_AP022617.1\|WP_082947923.1\|1622881_1623295_-\|DUF402-domain-containing-protein	gnl\|CDD\|225188	COG2306, COG2306, Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only].	6.07443e-41
NZ_AP022617.1\|WP_041925316.1\|1638634_1641529_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_AP022617.1\|WP_011855921.1\|1618934_1619519_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	1.40412e-23
NZ_AP022617.1\|WP_041925079.1\|1643052_1644222_-\|winged-helix-DNA-binding-domain-containing-protein	gnl\|CDD\|377630	pfam06224, HTH_42, Winged helix DNA-binding domain. This family contains two copies of a winged helix domain.	1.96906e-50
NZ_AP022617.1\|WP_083045270.1\|1636073_1637375_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.77194e-93
NZ_AP022617.1\|WP_011855919.1\|1622322_1622868_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00248572
NZ_AP022617.1\|WP_083045266.1\|1625646_1627044_+\|MFS-transporter	gnl\|CDD\|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.39561e-20
NZ_AP022617.1\|WP_011855910.1\|1633723_1634578_+\|thioesterase-family-protein	gnl\|CDD\|224857	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism].	1.04414e-71

>NZ_AP022617.1|WP_041925081.1|1628262_1629090_+|DUF4239-domain-containing-protein
MIGPDEWGCPVSLWLVSHLPSWLLLLVLITVTSGTAVAVQAIVRRRFATHLRSDEHNDVTKFAFGVIGFVFAFFIGFVVSATWGQINSADGRARAEGAAGAQLARDLQVFDEPDRDRIRQSLLAYHQAAITEWNEATEGRSLPAADDALNRVYLAYEQVEARTDAQKALLSASFSNLSDMNKARSERVLQARTDTGPPWSLWAVILLTSSLLLGCAIIYGVESAASHYTMVAILGVLVGAQLFLVLELSHPFVGEVATSSEPLKQVVRVLQSNPG
>NZ_AP022617.1|WP_011855914.1|1627673_1628135_+|VOC-family-protein
MSRAQLALNVDDLDEAVAFYSKLFDTAPAKVKPGYANFAVANPPLKLVLIENPGRGGTLNHLGVEVEDSQTVHAEIARLAGEGLFTEEEIGTTCCFATQDKVWVTGPAGEKWEVYTVLSDSETFGSNSPALAEDGEAVVCCSNNAGTASSTAS
>NZ_AP022617.1|WP_011855915.1|1627214_1627574_-|winged-helix-turn-helix-transcriptional-regulator
MPKTLPVVDISAPVCCSPVAAGPIGDEAALEIALRLKALADPVRVKLVSLLFSSSDGEECSRDLATAVDLAESTVSHHLSQLRRAGLIQSERRGMNVYHRPRRESLLALCAVLDPNCCR
>NZ_AP022617.1|WP_083045266.1|1625646_1627044_+|MFS-transporter
MTDTSRVSVGTWRDLLGPAHLGASTVLAGGVALYATNEFLTISLMPSAVADIGGQRFYAWVTTVYLVASVIAATTVHPLLMRLGPRRAYWSGLSVFAAGSLGCALAPTMEWLLVGRTVQGAAGGLLAGLGYAVINTALPSRLWTRASALVSAMWGVGTLVGPAAGGLFAQVGSWRWAFGVLVGLTVAMGVLVPFALPDRVDGTDAERPRLRIPLWSLLLLGAAALMVSMAGIPHDVRATAGLLLAGVAIVVVFVVVDRRATVAVLPPSAFGRGPLKWIYATLGLLMAATMVDMYVPLFGQRLAGMAPVVAGFFGAVLSVGWTGGEITSASLSRARVIVRTVASAPLVMAAGLTLGMFALRDEMSPGWAALWAVGLLVTGTGIGIAWPHLSAWAMSRVDDPAEGPAAAAAINTVQLICGAFGAGLAGVVVNLTDAGNATAARWLFAAFAGFVAVGVLASTRSCRTR
>NZ_AP022617.1|WP_011855917.1|1623442_1625602_+|excinuclease-ABC-subunit-B
MAFATEHPVLAHSEYRPVEAMVRTGNRFEVVSPYQPAGDQPAAIDELERRIRAGERDVVLLGATGTGKSATTAWLIERLQRPTLLMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYMDRSVELKVGDEVPRDALLRLLVDVQYARNDMAFTRGTFRVRGDTVEIIPSYEELAVRIEYFGDEVEALYYMHPLTGDVVRRVDSLRVFPATHYVAGPERMAQAISSIEKELEERLAELEGQGKLLEAQRLRMRTNYDIEMMRQVGFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKRNLVDFGFRLPSAVDNRPLTWEEFASRIGQTVYLSATPGPYEMSQSGGEFVEQVIRPTGLVDPQVIVKPTKGQIDDLIGEIRKRTELDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTRSLIQTIGRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEERGIDPKPLRKKIADILDQVYREADDTETVEVGGSGRNASRGRRAQGEPGRAVSAGIVEGRDTANMPRAELADLIKDLTEQMMTAARDLQFELAARIRDEIQDLKKELRGMDAAGLK
>NZ_AP022617.1|WP_082947923.1|1622881_1623295_-|DUF402-domain-containing-protein
MEPWGLYMARPTPGRAQFHYLESWLLPSLNLRASVFHFNPGFEREQDFYLDIGSYTPGPHRWTAEDHYLDLVVRSGIGAELCDVDELLTAVRHNLLTPEVGEEAVQTAVSTVDGLARHGYDLHRWLAGNGMVLTWQT
>NZ_AP022617.1|WP_011855919.1|1622322_1622868_-|hypothetical-protein
MNSVMRGLTAGAVVMTVVGGYQLSPAVALAEPDVQPQPAAQESPQVLRNIVYRARIDGVSRGATITYSAEGDQTQTANPTMVPGRVFEVNTVLPESDVAMMKVSVQWPYSANLHCEILIDDQIVAQADDFVAPRFLPQDPDYAALTCEAPVATPAAAPAQPPVPADPAAPPADAVPAPPGV
>NZ_AP022617.1|WP_011855920.1|1621160_1622318_+|dephospho-CoA-kinase
MLRIGLTGGIGAGKSTVSATFADCGGVVVDGDVIAREVVEPGTEGLAALVEAFGDDILLPDGALNRPALAAKAFQDDEQRAKLNGIVHPLVGKRRQEIIDSVAEGTVVVEDIPLLVETGMAPFFPLVVVVWADEETRVTRLIERGLPEHDARARMKAQASDEQRRAIADVLLDNSGTREELVEKARQLWFDRILPLAENIRTGEVVRVAPRLMPHNPAWAADAQRIVNRIKAAAGGKALRVDHVGSTSVDGLDAKDVVDIQVTVASLEDADEIAGGLAAVGYPRIQGVDSDVAHDDSGRWGKRLHGAADPGRPANIHLRVDGWPNQRFALLFLAWLAAHPEVRDEYLQVKRAALSAPDYAEAKEPWFAEVYPKALAWAEARDWRP
>NZ_AP022617.1|WP_011560398.1|1619643_1621083_+|30S-ribosomal-protein-S1
MPSPVATSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVTVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVQVGDDAMVKVIDIDLERRRISLSLKQANEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDSETNEWLEGFEKQREEWESRYAEAERRHKMHTAQMEKFAAAEAEEAARPVSNGSSRSEESTGGTLASDAQLAALREKLAGNA
>NZ_AP022617.1|WP_011855921.1|1618934_1619519_+|TetR/AcrR-family-transcriptional-regulator
MTAGRPRDARVTEAILDAVFAELADKGFGGLTMDAVARRARVGKSALYRRWPSKVEMTADLMRALSVTTDPAPDTGSLAGDVRALLENVLTWLTDDRVRRVYPDLIAEAQRTPALGDALMAYVGLPRRARAVEVLDRAVERGELAVEADQEVIVDALGALVFWRLIALGKPVSARHLDRVAAAICAMASGTEWR
>NZ_AP022617.1|WP_011855911.1|1632252_1633608_-|HAMP-domain-containing-histidine-kinase
MRVDERLRRVMPMPIVSLRTIVIVAALSVVVLVLTLGTWVWIGVTNEQYSQLDRQLDSVTSLGDFGTLLNAASTGDDPADPPADRTLVRTARIGGVTVSVPKDIVLPQLDIGYANTTIDGVEYRVRTFAAGPATIALGSPLSETQRRIDQLHLRVVLICGGVIAGTVVVGWVMWLIMINPFRLLAQQARAINAQSKPEEVQVGGVWEAAEIAEAVEGMLARIGEEQQRTKAALESARDFAAVASHELRTPLTAMRTNLEVLSTLDMTDEQRKEVINDVVRTQTRIEATLTALERLAQGELTTAEDHVPVDITELLDRAAHDALRSYPGLDVSLVPSAPVRILGLPAGLRLVIDNAIANAVKHGDATQIRLSAIRSGEDVEIAVDDNGSGVPEQERKLVFERFSRGSTASRSGSGLGLALVAQQAELHGGTASLETSPMGGARLLLRLPATR
>NZ_AP022617.1|WP_011855910.1|1633723_1634578_+|thioesterase-family-protein
MVARTLSDILTTLDVEQIADDEFLATQMDNAAHHIVGGHIAAQALMSASRTVPADRTPHSMHVYLLRAGDARRPVHFEITRLRDGGVLSSRRVLARQDDQVLLEALVSFTAPLDSFEHQQPIPDVPGPESLPSVQEQLSPYADEHGGHWVRPQPLDLRYVDPPARLALDRPDPSPRIRLWWRPAEPMPDDPILNSCLLTYVSGTALLETAMVVRRTTPLTSFSALIDHAVWFHRPADFSDWVLSDAVAPSGVHGRALATATMYNRTGALVCTATQEIYFGRDRR
>NZ_AP022617.1|WP_083045269.1|1634553_1635243_-|UdgX-family-uracil-DNA-binding-protein
MPTKVPGAEDFVPDTRDVSILADAVQACRGCELYRDATQGVFGQGSADATVMFVGEQPGDREDRAGEPFVGPAGRLLDKALVSAGIDRDGVYVTNAVKHFKFTLPERGKRRIHKTPSRTEVVACRPWLLAELDAVRPEVVVLLGATAAKALLGNDFRLTAHRGEVLALPPVTEPADLDVDPAVVATAHPSSVLRGPAENRQQAFDALVEDLRVVARLMRGDRQRRSRPK
>NZ_AP022617.1|WP_011560385.1|1635545_1635992_+|universal-stress-protein
MSAYRTVVVGTDGSDSSLRAVDRAGQIAAGSGAKLIVTTAYFPQSEDQRAADVLKDEGYKMSGNAPIYAILREARDRAKAAGAENIEEKAVVGAPVDALVELAEEVKADLLVVGNVGLSTIAGRLLGSVPANVARRSKTDVLIVHTTP
>NZ_AP022617.1|WP_083045270.1|1636073_1637375_+|cytochrome-P450
MTTTLHPTGIAPRENGTPPPHVPLGDIDLGTLDFWEWDDDRRDGAFATLRRESPITFFEVPEYAGFAGGRGHWALTRYDDVHHASRHPEVFSSIPTSTALNDVPAEIAEYVGSMISLDDPRHLRLRSIVNRAFTPKMLTRIEQSVRDRARRLVTGLVADHPDGHADFVQAVAGPFPLQIICDMMGIPEEDEEKVFHWTSIILGGADEEVAPDHETIVGAVLGLGEYGLALAEDRRAHPTDDVTTNLVRAEVDGERLTSAEIGSFFILLSAAGNETTRNAISHGLVALSRYPEQRQRWWDDFDTVAPTAVEEIVRWASPIIFMRRNLTEDIEMRGVRMKAGDKVSMWYNSANRDERRFDNPWLFDVTRDPNPQIGFGAGGAHFCLGANLARREIRVLYSELRRQVPDIVAVEEPAILRSAFVHGIKRLPVAWTG
>NZ_AP022617.1|WP_011855907.1|1637378_1637879_-|DUF427-domain-containing-protein
MAGRPVPVTPGPGQESVWDYPRPPRFEAFRGSITVDFGGRTVASTTTAWRVLETSHPPTYYLPVDSFTPGALRPAAGSSWCEWKGQAAYYDVVVGDRVAPGAAWTYPHPTPGFEAIAGAVAVMAAPMDRCTVNGEQVVPQPGGFYGGWVTSWIVGPFKGVPGSMGW
>NZ_AP022617.1|WP_011855906.1|1637868_1638546_-|MBL-fold-metallo-hydrolase
MTVVDDNYTGHVEPRTAARRTLPGATIVKVSVGPMDNNAYLVTCSRTGETLLIDAANDADVLLDLVRELAPTVTLILTSHQHFDHWQALEALAEATGAPTAAHELDAEPLPVTPDRYLAGGDTLRIGELTFDVIHLRGHTPGSIALALHGPAAGDAVHLFTGDCLFPGGVGKTWQEGDFEKLLTDVTTRVFDVYPDSTVVYPGHGDDTTLGAERPHLGEWRDRGW
>NZ_AP022617.1|WP_041925316.1|1638634_1641529_+|excinuclease-ABC-subunit-UvrA
MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGMPHCPVCGERIARQTPQQIVDQVLAMDEGLRFQVLAPVVRTRKGEFVDLFEKLNSQGYSRVRVDGVVYPLTEPPKLKKQEKHDIEVVVDRLTVKATAKQRLTDSVETALTLADGIVVLEFVDREDDHPHREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECAGLGVRKEVDPELVIPDPDLTLAEGAIAPWSMGQTAEYFTRMLTGLGESMGFDVDTPWKKLPAKVRRAILEGCDEQVHVKYRNRYGRTRSYYADFEGVMAFLQRRMEQTDSEQMKERYEGFMRDVPCPECDGTRLKPEILAVTLAAGDHGAKSIAEVAELSIADCADFLNALTLGAREQAIAGQVLKEIQSRLGFLLDVGLDYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIDTLVRLRELGNTLIVVEHDLDTIAHADWVVDIGPAAGEHGGRIVHSGTYQDLLRNPESLTGAYLSGRESIEVPAIRRPVDRKRQLTVIGAREHNLKDVDVAFPLGVLTSVTGVSGSGKSTLVNDILASVLANKLNGARQVPGRHTRINGLDQLDKLVRVDQSPIGRTPRSNPATYTGVFDKIRSLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKTIAEVLDLSIEDAAEFFEPISSIHRYLKTLVDVGLGYVRLGQPAPTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLKVINGLVDKGNTVIVIEHNLDVIKTSDWIIDMGPEGGAGGGTVVAQGTPEDVAANTDSYTGHFLAEMLDVPAPTPKRRKVSA
>NZ_AP022617.1|WP_011855904.1|1641518_1643000_-|NAD(P)/FAD-dependent-oxidoreductase
MKIAIIGSGFSGLGAAIRLQEAGHRDFVVFERGPDVGGTWRDNTYPGAACDVPSHLYSYSFALNPDWTRSFSTQPEIEDYLRKVARQYGVLDRHRFGCTVSRAAWNPTESRWELSTDSGPATADVLITAFGSLAEPSLPGIPGIESFTAAGGEMFHSARWNHDADLTGKRVAVIGTGASAIQIVPEIADRVAHLDVYQRTAPWLLPRFDRPFTRAEKWAFRNVQGFLRLARAGIYTSREVQVVGLAKNPNLMKGFELLSRAKIRTEIKDPELRRKVTPNFRIGCKRMLISNDWYPTLDRGHVDLITDGIHEIDGNRIIATDGTAREVDALVVATGFHVTDSPMFDTVCGADGASLTQRFADKGMRAYKGTTIAGYPNMFVLVGPNTGLGHSSMVYMIESQLNYVVDAVSTMREEGLRTVEVKQDALDAYNERLQQALSGSVWMTGKCASWYLDAHGNNTTLWPDFTFRFRNQTRRFDLDAYEVTRAEESALTR
>NZ_AP022617.1|WP_041925079.1|1643052_1644222_-|winged-helix-DNA-binding-domain-containing-protein
MRSFTPTERRARLARRHFLAGDQRAASPDEVVTRMVGLHATDPATPYLTLWARVAGFDLTHLDTALYECRTVAKHLAMRRTLWVVGSGDLPVIQSVASDRVAANERRRLIADAEKSGVADDGAEWLDTACAAVLDHLRRNGPTSARELRAALPELAGSHDPAPGKQWGGATPLAPRVLTVLGVRGDIVRGPNDGGWTVSRPRWTLRDDWLGAGDDARAPADEAAIKAVGRWLRTFGPATVTDVKWWFGHTLTWARRTLQALGAVDVDLHGTPGVALPDDLDVEPEPEPWAALLPGLDVTTMGWFDREWYLGGHRAQVFDRNGNGGPTAWWNGRIVGGWGQDADGRVVLRLLEDVGRDGEKALQQRAHDLSAWLAGARVSPRFPSPVMKA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP022617_2	2.1\|993690\|31\|NZ_AP022617\|CRISPRCasFinder	993690-993720	31	NZ_CP042264	Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence	138827-138857	6	0.806
NZ_AP022617_3	3.1\|1629638\|31\|NZ_AP022617\|CRISPRCasFinder	1629638-1629668	31	NZ_LT703510	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 6	4429-4459	6	0.806
NZ_AP022617_3	3.1\|1629638\|31\|NZ_AP022617\|CRISPRCasFinder	1629638-1629668	31	NZ_CP015275	Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 3, complete sequence	8584-8614	6	0.806
NZ_AP022617_3	3.1\|1629638\|31\|NZ_AP022617\|CRISPRCasFinder	1629638-1629668	31	NZ_CP019222	Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_3, complete sequence	1948-1978	6	0.806
NZ_AP022617_3	3.1\|1629638\|31\|NZ_AP022617\|CRISPRCasFinder	1629638-1629668	31	NZ_CP045966	Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_03, complete sequence	2897-2927	6	0.806
NZ_AP022617_1	1.1\|29272\|33\|NZ_AP022617\|CRISPRCasFinder	29272-29304	33	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	348645-348677	7	0.788
NZ_AP022617_2	2.1\|993690\|31\|NZ_AP022617\|CRISPRCasFinder	993690-993720	31	NC_015060	Granulicella tundricola MP5ACTX9 plasmid pACIX905, complete sequence	113032-113062	8	0.742
NZ_AP022617_2	2.1\|993690\|31\|NZ_AP022617\|CRISPRCasFinder	993690-993720	31	NZ_CP022418	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence	113756-113786	8	0.742
NZ_AP022617_2	2.1\|993690\|31\|NZ_AP022617\|CRISPRCasFinder	993690-993720	31	NZ_CP013105	Paraburkholderia caribensis strain MWAP64 plasmid 2, complete sequence	217743-217773	8	0.742
NZ_AP022617_2	2.1\|993690\|31\|NZ_AP022617\|CRISPRCasFinder	993690-993720	31	NZ_CP015446	Streptomyces sp. S8 plasmid unnamed, complete sequence	60009-60039	8	0.742
NZ_AP022617_2	2.1\|993690\|31\|NZ_AP022617\|CRISPRCasFinder	993690-993720	31	MN310549	Gordonia phage Gibbous, complete genome	24661-24691	8	0.742
NZ_AP022617_2	2.1\|993690\|31\|NZ_AP022617\|CRISPRCasFinder	993690-993720	31	MN586057	Gordonia phage Cleo, complete genome	24930-24960	8	0.742
NZ_AP022617_3	3.1\|1629638\|31\|NZ_AP022617\|CRISPRCasFinder	1629638-1629668	31	NZ_CP020041	Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence	72578-72608	8	0.742
NZ_AP022617_3	3.1\|1629638\|31\|NZ_AP022617\|CRISPRCasFinder	1629638-1629668	31	NZ_CP019315	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-3, complete sequence	70251-70281	8	0.742

1. spacer 2.1|993690|31|NZ_AP022617|CRISPRCasFinder matches to NZ_CP042264 (Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.806

aggccgccaagaaaacaccggcgaagaagac	CRISPR spacer
aaggcgacaagaagacaccggcgaagacgtc	Protospacer
*.* ** ******.************* * *

2. spacer 3.1|1629638|31|NZ_AP022617|CRISPRCasFinder matches to NZ_LT703510 (Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 6) position: , mismatch: 6, identity: 0.806

gaattc---caccggccggctcgctcaacggcac	CRISPR spacer
---tcccagcacccgccggcgcgctcaacggcac	Protospacer
   *.*   **** ****** *************

3. spacer 3.1|1629638|31|NZ_AP022617|CRISPRCasFinder matches to NZ_CP015275 (Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 3, complete sequence) position: , mismatch: 6, identity: 0.806

gaattc---caccggccggctcgctcaacggcac	CRISPR spacer
---tcccagcacccgccggcgcgctcaacggcac	Protospacer
   *.*   **** ****** *************

4. spacer 3.1|1629638|31|NZ_AP022617|CRISPRCasFinder matches to NZ_CP019222 (Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_3, complete sequence) position: , mismatch: 6, identity: 0.806

gaattc---caccggccggctcgctcaacggcac	CRISPR spacer
---tcccagcacccgccggcgcgctcaacggcac	Protospacer
   *.*   **** ****** *************

5. spacer 3.1|1629638|31|NZ_AP022617|CRISPRCasFinder matches to NZ_CP045966 (Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_03, complete sequence) position: , mismatch: 6, identity: 0.806

gaattc---caccggccggctcgctcaacggcac	CRISPR spacer
---tcccagcacccgccggcgcgctcaacggcac	Protospacer
   *.*   **** ****** *************

6. spacer 1.1|29272|33|NZ_AP022617|CRISPRCasFinder matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 7, identity: 0.788

cggtctgctgggcgctcggcacgacgggctggg	CRISPR spacer
cgcgctgctgggcgcgcggcacgccggggcgcg	Protospacer
**  *********** ******* **** .* *

7. spacer 2.1|993690|31|NZ_AP022617|CRISPRCasFinder matches to NC_015060 (Granulicella tundricola MP5ACTX9 plasmid pACIX905, complete sequence) position: , mismatch: 8, identity: 0.742

aggccgccaagaaaacaccggcgaagaagac	CRISPR spacer
tcgccgccaagaaaactccggcaaagcgctc	Protospacer
  ************** *****.*** .  *

8. spacer 2.1|993690|31|NZ_AP022617|CRISPRCasFinder matches to NZ_CP022418 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence) position: , mismatch: 8, identity: 0.742

aggccgccaagaaaacaccggcgaagaagac	CRISPR spacer
tggccgcgaagaaaagaccggcgaatgctat	Protospacer
 ****** ******* ********* .  *.

9. spacer 2.1|993690|31|NZ_AP022617|CRISPRCasFinder matches to NZ_CP013105 (Paraburkholderia caribensis strain MWAP64 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.742

aggccgccaagaaaacaccggcgaagaagac	CRISPR spacer
cagtaacgaagtcaacaccggcgaagaagac	Protospacer
 .*. .* ***  ******************

10. spacer 2.1|993690|31|NZ_AP022617|CRISPRCasFinder matches to NZ_CP015446 (Streptomyces sp. S8 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

aggccgccaagaaaacaccggcgaagaagac	CRISPR spacer
cccccaggaagaaggcaccggcgaagaagac	Protospacer
   **.  *****..****************

11. spacer 2.1|993690|31|NZ_AP022617|CRISPRCasFinder matches to MN310549 (Gordonia phage Gibbous, complete genome) position: , mismatch: 8, identity: 0.742

aggccgccaagaaaacaccggcgaagaagac	CRISPR spacer
ctccggccaagaagaccccggcgaagaaagc	Protospacer
   * ********.** ***********..*

12. spacer 2.1|993690|31|NZ_AP022617|CRISPRCasFinder matches to MN586057 (Gordonia phage Cleo, complete genome) position: , mismatch: 8, identity: 0.742

aggccgccaagaaaacaccggcgaagaagac	CRISPR spacer
ctccggccaagaagaccccggcgaagaaagc	Protospacer
   * ********.** ***********..*

13. spacer 3.1|1629638|31|NZ_AP022617|CRISPRCasFinder matches to NZ_CP020041 (Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence) position: , mismatch: 8, identity: 0.742

gaattccaccggccggctcgctcaacggcac	CRISPR spacer
gaagtacaccggccggctcgctcccgccgac	Protospacer
*** * *****************      **

14. spacer 3.1|1629638|31|NZ_AP022617|CRISPRCasFinder matches to NZ_CP019315 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-3, complete sequence) position: , mismatch: 8, identity: 0.742

gaattccaccggccggctcgctcaacggcac	CRISPR spacer
cacatccacgggccggatcgctcaacgcggc	Protospacer
 *  ***** ****** **********  .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

253588 : 261773

Mollivirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041925370.1\|253588_254353_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	2.0e-11	42.5
WP_064872871.1\|254404_255280_-	formylglycine-generating enzyme family protein	A0A075BSL8	Microcystis_phage	1.0e-14	28.9
WP_064872869.1\|255272_256181_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
WP_064872867.1\|256180_257725_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	1.6e-156	51.9
WP_011561489.1\|258038_258755_+	MgtC/SapB family protein	G3MA03	Bacillus_virus	1.4e-14	44.4
WP_011561488.1\|258829_259150_+	hypothetical protein	NA	NA	NA	NA
WP_064872866.1\|259159_260275_-	NAD-dependent epimerase/dehydratase family protein	Q76TT0	Molluscum_contagiosum_virus	4.1e-29	33.3
WP_064872864.1\|260338_260551_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_064872862.1\|260537_261773_-	exodeoxyribonuclease VII large subunit	A0A1B3AYB4	Gordonia_phage	1.3e-68	51.9

DBSCAN-SWA_2

2024454 : 2079733

uncultured_Mediterranean_phage(28.57%)

integrase,transposase

attL 2024114:2024132|attR 2079872:2079888

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2024114:2024132	attL	NA	NA	NA	NA
WP_083045115.1\|2024454_2025585_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
2024114:2024132	attL	NA	NA	NA	NA
WP_083045113.1\|2027897_2028680_+\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
WP_083045112.1\|2028676_2030740_+\|transposase	Mu transposase C-terminal domain-containing protein	NA	NA	NA	NA
WP_083045111.1\|2030743_2031742_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_133056656.1\|2032449_2032722_+	hypothetical protein	NA	NA	NA	NA
WP_024445222.1\|2032765_2033041_+	hypothetical protein	NA	NA	NA	NA
WP_158498036.1\|2033037_2033205_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_011767782.1\|2033885_2034506_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013470158.1\|2034596_2036057_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_011767780.1\|2036053_2036869_+	AAA family ATPase	NA	NA	NA	NA
WP_083045109.1\|2037300_2038155_+	hypothetical protein	NA	NA	NA	NA
WP_024445219.1\|2038235_2038604_+	hypothetical protein	NA	NA	NA	NA
WP_083045108.1\|2038653_2039532_+	hypothetical protein	NA	NA	NA	NA
WP_163647407.1\|2039677_2040550_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_083045106.1\|2040850_2041555_-	cardiolipin synthase	NA	NA	NA	NA
WP_083045105.1\|2041544_2043596_-	DUF1998 domain-containing protein	NA	NA	NA	NA
WP_083045104.1\|2043595_2047309_-	helicase	NA	NA	NA	NA
WP_083045103.1\|2047308_2051382_-	N-6 DNA methylase	A0A1B1IUC6	uncultured_Mediterranean_phage	1.8e-37	28.4
WP_083045102.1\|2051381_2054822_-	DEAD/DEAH box helicase family protein	A0A1B1IUI1	uncultured_Mediterranean_phage	4.5e-82	28.3
WP_163647408.1\|2055169_2057176_-	AAA family ATPase	NA	NA	NA	NA
WP_133056654.1\|2057228_2058455_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_083045099.1\|2058549_2062317_+	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_110807684.1\|2062313_2063936_+	GTPase domain-containing protein	NA	NA	NA	NA
WP_083045659.1\|2064910_2066092_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5S7K9	Streptococcus_phage	2.3e-06	55.6
WP_083045661.1\|2068255_2068699_+\|transposase	transposase	NA	NA	NA	NA
WP_083045649.1\|2069133_2070495_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_083045650.1\|2070734_2072129_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-33	33.9
WP_083045651.1\|2072052_2072805_-\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	1.4e-36	40.4
WP_083045652.1\|2072801_2073125_-\|transposase	transposase	A0A2P1JR43	Mycobacterium_phage	5.4e-06	41.3
WP_083045653.1\|2073216_2076027_-	hypothetical protein	NA	NA	NA	NA
WP_083045654.1\|2076278_2077685_-\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	1.4e-87	44.5
WP_011894084.1\|2078992_2079733_+\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
2078542:2078560	attR	NA	NA	NA	NA
WP_011894084.1\|2078992_2079733_+\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
2079872:2079888	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2156571 : 2174356

Streptococcus_phage(100.0%)

integrase,transposase,protease

attL 2171488:2171508|attR 2181675:2181695

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064872668.1\|2156571_2157336_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_064872582.1\|2157471_2158788_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_064872580.1\|2159199_2160561_-	hypothetical protein	NA	NA	NA	NA
WP_064872578.1\|2160557_2161007_-	hypothetical protein	NA	NA	NA	NA
WP_064916353.1\|2162203_2163115_-	sterol desaturase family protein	NA	NA	NA	NA
WP_083045661.1\|2164625_2165069_-\|transposase	transposase	NA	NA	NA	NA
WP_083045659.1\|2167231_2168413_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5S7K9	Streptococcus_phage	2.3e-06	55.6
WP_082947906.1\|2168904_2170413_-\|transposase	IS21 family transposase	NA	NA	NA	NA
2171488:2171508	attL	NA	NA	NA	NA
WP_011894084.1\|2171527_2172268_+\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
WP_005148662.1\|2172391_2174356_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
2181675:2181695	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2973668 : 2981394

Lactococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082947857.1\|2973668_2975837_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-205	51.0
WP_011559216.1\|2975803_2976262_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA
WP_011559215.1\|2976294_2976546_-	redoxin NrdH	V5UN81	Mycobacterium_phage	1.6e-21	64.5
WP_011559214.1\|2977011_2977578_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	1.2e-08	33.1
WP_011559213.1\|2977673_2978276_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011559212.1\|2978279_2979347_+	DNA polymerase IV	F1C5A5	Cronobacter_phage	1.0e-13	26.5
WP_011855253.1\|2979356_2980529_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	4.2e-56	35.7
WP_083045449.1\|2980536_2981394_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	1.3e-06	38.5

DBSCAN-SWA_5

3831481 : 3882227

Leptospira_phage(16.67%)

tail,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085975375.1\|3831481_3832619_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.3e-33	34.8
WP_083044942.1\|3832710_3833223_-	hypothetical protein	NA	NA	NA	NA
WP_133056648.1\|3833824_3834973_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_083044940.1\|3835219_3836308_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_083044939.1\|3836371_3837400_-	glycosyltransferase	NA	NA	NA	NA
WP_163647419.1\|3837654_3838377_-	glycosyltransferase	NA	NA	NA	NA
WP_133056647.1\|3838661_3840014_-	hypothetical protein	NA	NA	NA	NA
WP_163647420.1\|3840351_3841119_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA
WP_083044936.1\|3841120_3841951_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_163647421.1\|3841960_3842815_-	glycosyltransferase	NA	NA	NA	NA
WP_083044945.1\|3842901_3844287_-	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA
WP_083044934.1\|3844471_3846241_-	DUF4012 domain-containing protein	NA	NA	NA	NA
WP_083044933.1\|3846446_3846809_-	hypothetical protein	NA	NA	NA	NA
WP_083044932.1\|3847448_3848777_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.9e-68	36.6
WP_083044931.1\|3848985_3849174_+	hypothetical protein	NA	NA	NA	NA
WP_011558343.1\|3849266_3849974_-	50S ribosomal protein L1	NA	NA	NA	NA
WP_011854758.1\|3850110_3850539_-	50S ribosomal protein L11	NA	NA	NA	NA
WP_083044930.1\|3850573_3851389_-	transcription termination/antitermination protein NusG	NA	NA	NA	NA
WP_011854756.1\|3851425_3851869_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_011854755.1\|3852184_3852694_-	(3R)-hydroxyacyl-ACP dehydratase subunit HadC	NA	NA	NA	NA
WP_011854754.1\|3852709_3853138_-	(3R)-hydroxyacyl-ACP dehydratase subunit HadB	NA	NA	NA	NA
WP_064874878.1\|3853124_3853604_-	(3R)-hydroxyacyl-ACP dehydratase subunit HadA	NA	NA	NA	NA
WP_011854752.1\|3853655_3853823_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_083044929.1\|3854165_3855365_-	hemin transporter	NA	NA	NA	NA
WP_083044928.1\|3855364_3855826_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_083044927.1\|3855933_3856650_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_083044926.1\|3856971_3857976_+	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_011854747.1\|3858130_3858754_+	response regulator transcription factor	NA	NA	NA	NA
WP_064916204.1\|3858842_3859535_+	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_083044925.1\|3859531_3861547_+	ATP-binding protein	A0A2D2W2C3	Stenotrophomonas_phage	1.6e-07	45.7
WP_133056646.1\|3861584_3862886_+	hypothetical protein	NA	NA	NA	NA
WP_083044923.1\|3862896_3864291_+	trypsin-like peptidase domain-containing protein	A0A1S5Y2X3	uncultured_archaeal_virus	6.2e-06	29.7
WP_083044922.1\|3864547_3866392_-	hypothetical protein	NA	NA	NA	NA
WP_011854741.1\|3866424_3870387_-	hypothetical protein	NA	NA	NA	NA
WP_011854740.1\|3870390_3871110_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_011854739.1\|3871344_3872883_+\|tail	phage tail sheath family protein	H6WFT7	Cyanophage	7.2e-24	32.5
WP_011854738.1\|3872919_3873372_+\|tail	phage tail protein	NA	NA	NA	NA
WP_011854737.1\|3873364_3873805_+	hypothetical protein	NA	NA	NA	NA
WP_165760722.1\|3873801_3873960_+	hypothetical protein	NA	NA	NA	NA
WP_041924978.1\|3874086_3875991_+	hypothetical protein	NA	NA	NA	NA
WP_011854735.1\|3876004_3876457_+\|tail	phage tail protein	NA	NA	NA	NA
WP_110807662.1\|3876453_3877221_+	peptidase M23	NA	NA	NA	NA
WP_011854733.1\|3877227_3878991_+	VgrG-related protein	NA	NA	NA	NA
WP_011854732.1\|3879006_3879291_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_011854731.1\|3879293_3879734_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_011854730.1\|3879735_3881694_+\|plate	putative baseplate assembly protein	A0A1J0GW37	Streptomyces_phage	5.8e-10	26.8
WP_011854729.1\|3881696_3882227_+\|tail	tail protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP022617

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection