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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP022590 Mycobacterium mantenii strain JCM 18113 13 crisprs csa3,cas3,WYL,cas4,DEDDh,DinG 10 10 1 0

Results visualization

1. NZ_AP022590
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_1 30848-30928 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_2 187889-188000 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_3 188225-188647 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_4 194087-194198 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_5 194423-194845 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_6 1477438-1477543 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_7 1602603-1602694 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_8 1796564-1796667 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_9 2122122-2122576 Orphan NA
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_10 2214005-2214082 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_11 4322698-4322790 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_12 5466106-5466247 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022590_13 6181071-6181151 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_AP022590_3 3.1|188252|33|NZ_AP022590|CRISPRCasFinder 188252-188284 33 NZ_AP022590.1 192234-192266 0 1.0
NZ_AP022590_3 3.1|188252|33|NZ_AP022590|CRISPRCasFinder 188252-188284 33 NZ_AP022590.1 195434-195466 0 1.0
NZ_AP022590_3 3.2|188312|57|NZ_AP022590|CRISPRCasFinder 188312-188368 57 NZ_AP022590.1 192294-192350 0 1.0
NZ_AP022590_3 3.3|188396|57|NZ_AP022590|CRISPRCasFinder 188396-188452 57 NZ_AP022590.1 192378-192434 0 1.0
NZ_AP022590_3 3.4|188480|57|NZ_AP022590|CRISPRCasFinder 188480-188536 57 NZ_AP022590.1 192462-192518 0 1.0
NZ_AP022590_3 3.5|188564|57|NZ_AP022590|CRISPRCasFinder 188564-188620 57 NZ_AP022590.1 192546-192602 0 1.0
NZ_AP022590_5 5.1|194450|33|NZ_AP022590|CRISPRCasFinder 194450-194482 33 NZ_AP022590.1 192234-192266 0 1.0
NZ_AP022590_5 5.1|194450|33|NZ_AP022590|CRISPRCasFinder 194450-194482 33 NZ_AP022590.1 195434-195466 0 1.0
NZ_AP022590_5 5.2|194510|57|NZ_AP022590|CRISPRCasFinder 194510-194566 57 NZ_AP022590.1 192294-192350 0 1.0
NZ_AP022590_5 5.3|194594|57|NZ_AP022590|CRISPRCasFinder 194594-194650 57 NZ_AP022590.1 192378-192434 0 1.0
NZ_AP022590_5 5.4|194678|57|NZ_AP022590|CRISPRCasFinder 194678-194734 57 NZ_AP022590.1 192462-192518 0 1.0
NZ_AP022590_5 5.5|194762|57|NZ_AP022590|CRISPRCasFinder 194762-194818 57 NZ_AP022590.1 192546-192602 0 1.0
NZ_AP022590_3 3.4|188480|57|NZ_AP022590|CRISPRCasFinder 188480-188536 57 NZ_AP022590.1 184259-184315 1 0.982
NZ_AP022590_5 5.4|194678|57|NZ_AP022590|CRISPRCasFinder 194678-194734 57 NZ_AP022590.1 184259-184315 1 0.982
NZ_AP022590_3 3.5|188564|57|NZ_AP022590|CRISPRCasFinder 188564-188620 57 NZ_AP022590.1 184343-184399 2 0.965
NZ_AP022590_5 5.5|194762|57|NZ_AP022590|CRISPRCasFinder 194762-194818 57 NZ_AP022590.1 184343-184399 2 0.965

1. spacer 3.1|188252|33|NZ_AP022590|CRISPRCasFinder matches to position: 192234-192266, mismatch: 0, identity: 1.0

cggcggtggagggcttttgggctcgggtggcac	CRISPR spacer
cggcggtggagggcttttgggctcgggtggcac	Protospacer
*********************************

2. spacer 3.1|188252|33|NZ_AP022590|CRISPRCasFinder matches to position: 195434-195466, mismatch: 0, identity: 1.0

cggcggtggagggcttttgggctcgggtggcac	CRISPR spacer
cggcggtggagggcttttgggctcgggtggcac	Protospacer
*********************************

3. spacer 3.2|188312|57|NZ_AP022590|CRISPRCasFinder matches to position: 192294-192350, mismatch: 0, identity: 1.0

tagtgtcggtggcacgttgaccgatggcggcactgtgacggtgagctcgggtggcct	CRISPR spacer
tagtgtcggtggcacgttgaccgatggcggcactgtgacggtgagctcgggtggcct	Protospacer
*********************************************************

4. spacer 3.3|188396|57|NZ_AP022590|CRISPRCasFinder matches to position: 192378-192434, mismatch: 0, identity: 1.0

gagctcgggtggcctgttgaccgatggtggcaccgtgacggtcaatgctggtggcgg	CRISPR spacer
gagctcgggtggcctgttgaccgatggtggcaccgtgacggtcaatgctggtggcgg	Protospacer
*********************************************************

5. spacer 3.4|188480|57|NZ_AP022590|CRISPRCasFinder matches to position: 192462-192518, mismatch: 0, identity: 1.0

cggctcgggtggggtgttgaccgatagcggcacggtgaccgtcgccagtggcggcac	CRISPR spacer
cggctcgggtggggtgttgaccgatagcggcacggtgaccgtcgccagtggcggcac	Protospacer
*********************************************************

6. spacer 3.5|188564|57|NZ_AP022590|CRISPRCasFinder matches to position: 192546-192602, mismatch: 0, identity: 1.0

gggttcgggtggcatcctgaccgacggcggcaccgtgactgtcaacgtcggtggcgt	CRISPR spacer
gggttcgggtggcatcctgaccgacggcggcaccgtgactgtcaacgtcggtggcgt	Protospacer
*********************************************************

7. spacer 5.1|194450|33|NZ_AP022590|CRISPRCasFinder matches to position: 192234-192266, mismatch: 0, identity: 1.0

cggcggtggagggcttttgggctcgggtggcac	CRISPR spacer
cggcggtggagggcttttgggctcgggtggcac	Protospacer
*********************************

8. spacer 5.1|194450|33|NZ_AP022590|CRISPRCasFinder matches to position: 195434-195466, mismatch: 0, identity: 1.0

cggcggtggagggcttttgggctcgggtggcac	CRISPR spacer
cggcggtggagggcttttgggctcgggtggcac	Protospacer
*********************************

9. spacer 5.2|194510|57|NZ_AP022590|CRISPRCasFinder matches to position: 192294-192350, mismatch: 0, identity: 1.0

tagtgtcggtggcacgttgaccgatggcggcactgtgacggtgagctcgggtggcct	CRISPR spacer
tagtgtcggtggcacgttgaccgatggcggcactgtgacggtgagctcgggtggcct	Protospacer
*********************************************************

10. spacer 5.3|194594|57|NZ_AP022590|CRISPRCasFinder matches to position: 192378-192434, mismatch: 0, identity: 1.0

gagctcgggtggcctgttgaccgatggtggcaccgtgacggtcaatgctggtggcgg	CRISPR spacer
gagctcgggtggcctgttgaccgatggtggcaccgtgacggtcaatgctggtggcgg	Protospacer
*********************************************************

11. spacer 5.4|194678|57|NZ_AP022590|CRISPRCasFinder matches to position: 192462-192518, mismatch: 0, identity: 1.0

cggctcgggtggggtgttgaccgatagcggcacggtgaccgtcgccagtggcggcac	CRISPR spacer
cggctcgggtggggtgttgaccgatagcggcacggtgaccgtcgccagtggcggcac	Protospacer
*********************************************************

12. spacer 5.5|194762|57|NZ_AP022590|CRISPRCasFinder matches to position: 192546-192602, mismatch: 0, identity: 1.0

gggttcgggtggcatcctgaccgacggcggcaccgtgactgtcaacgtcggtggcgt	CRISPR spacer
gggttcgggtggcatcctgaccgacggcggcaccgtgactgtcaacgtcggtggcgt	Protospacer
*********************************************************

13. spacer 3.4|188480|57|NZ_AP022590|CRISPRCasFinder matches to position: 184259-184315, mismatch: 1, identity: 0.982

cggctcgggtggggtgttgaccgatagcggcacggtgaccgtcgccagtggcggcac	CRISPR spacer
cggctcgggtggggtgttgaccgatagcggcacggtgaccgtcgccagtggtggcac	Protospacer
***************************************************.*****

14. spacer 5.4|194678|57|NZ_AP022590|CRISPRCasFinder matches to position: 184259-184315, mismatch: 1, identity: 0.982

cggctcgggtggggtgttgaccgatagcggcacggtgaccgtcgccagtggcggcac	CRISPR spacer
cggctcgggtggggtgttgaccgatagcggcacggtgaccgtcgccagtggtggcac	Protospacer
***************************************************.*****

15. spacer 3.5|188564|57|NZ_AP022590|CRISPRCasFinder matches to position: 184343-184399, mismatch: 2, identity: 0.965

gggttcgggtggcatcctgaccgacggcggcaccgtgactgtcaacgtcggtggcgt	CRISPR spacer
gggttcgggtggcaccgtgaccgacggcggcaccgtgactgtcaacgtcggtggcgt	Protospacer
**************.* ****************************************

16. spacer 5.5|194762|57|NZ_AP022590|CRISPRCasFinder matches to position: 184343-184399, mismatch: 2, identity: 0.965

gggttcgggtggcatcctgaccgacggcggcaccgtgactgtcaacgtcggtggcgt	CRISPR spacer
gggttcgggtggcaccgtgaccgacggcggcaccgtgactgtcaacgtcggtggcgt	Protospacer
**************.* ****************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_AP022590_9 9.2|2122208|22|NZ_AP022590|CRT 2122208-2122229 22 NZ_CP045217 Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence 39283-39304 2 0.909
NZ_AP022590_9 9.2|2122208|22|NZ_AP022590|CRT 2122208-2122229 22 NZ_CP044079 Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence 312018-312039 2 0.909
NZ_AP022590_9 9.2|2122208|22|NZ_AP022590|CRT 2122208-2122229 22 NZ_CP031079 Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence 218468-218489 2 0.909
NZ_AP022590_9 9.2|2122208|22|NZ_AP022590|CRT 2122208-2122229 22 NZ_CP016620 Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence 137024-137045 2 0.909
NZ_AP022590_9 9.3|2122256|22|NZ_AP022590|CRT 2122256-2122277 22 NZ_CP035002 Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence 549486-549507 2 0.909
NZ_AP022590_9 9.4|2122304|22|NZ_AP022590|CRT 2122304-2122325 22 NZ_CP021331 Maritalea myrionectae strain HL2708#5 plasmid pHL2708X3, complete sequence 11189-11210 2 0.909
NZ_AP022590_9 9.8|2122529|22|NZ_AP022590|CRT 2122529-2122550 22 NZ_LT960615 Hartmannibacter diazotrophicus strain E19T plasmid HDIAp1, complete sequence 115591-115612 2 0.909
NZ_AP022590_1 1.1|30872|33|NZ_AP022590|CRISPRCasFinder 30872-30904 33 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 318910-318942 5 0.848
NZ_AP022590_1 1.1|30872|33|NZ_AP022590|CRISPRCasFinder 30872-30904 33 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 318119-318151 5 0.848
NZ_AP022590_13 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder 6181095-6181127 33 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 318910-318942 5 0.848
NZ_AP022590_13 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder 6181095-6181127 33 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 318119-318151 5 0.848
NZ_AP022590_1 1.1|30872|33|NZ_AP022590|CRISPRCasFinder 30872-30904 33 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 550191-550223 6 0.818
NZ_AP022590_13 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder 6181095-6181127 33 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 550191-550223 6 0.818
NZ_AP022590_1 1.1|30872|33|NZ_AP022590|CRISPRCasFinder 30872-30904 33 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 767813-767845 7 0.788
NZ_AP022590_1 1.1|30872|33|NZ_AP022590|CRISPRCasFinder 30872-30904 33 LT559120 Nonomuraea sp. ATCC 39727 isolate nono1 genome assembly, plasmid: III 43781-43813 7 0.788
NZ_AP022590_9 9.6|2122400|34|NZ_AP022590|CRT 2122400-2122433 34 NZ_AP014707 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_3p, complete sequence 28129-28162 7 0.794
NZ_AP022590_13 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder 6181095-6181127 33 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 767813-767845 7 0.788
NZ_AP022590_13 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder 6181095-6181127 33 LT559120 Nonomuraea sp. ATCC 39727 isolate nono1 genome assembly, plasmid: III 43781-43813 7 0.788
NZ_AP022590_1 1.1|30872|33|NZ_AP022590|CRISPRCasFinder 30872-30904 33 NZ_CP049906 Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence 16486-16518 8 0.758
NZ_AP022590_1 1.1|30872|33|NZ_AP022590|CRISPRCasFinder 30872-30904 33 NZ_CP022991 Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence 266565-266597 8 0.758
NZ_AP022590_9 9.1|2122148|34|NZ_AP022590|CRT 2122148-2122181 34 NC_048047 Caulobacter phage CcrBL9, complete genome 253711-253744 8 0.765
NZ_AP022590_9 9.6|2122400|34|NZ_AP022590|CRT 2122400-2122433 34 NZ_CP054618 Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence 19157-19190 8 0.765
NZ_AP022590_10 10.1|2214028|32|NZ_AP022590|CRISPRCasFinder 2214028-2214059 32 NC_012521 Rhodococcus opacus B4 plasmid pROB02, complete sequence 122787-122818 8 0.75
NZ_AP022590_13 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder 6181095-6181127 33 NZ_CP049906 Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence 16486-16518 8 0.758
NZ_AP022590_13 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder 6181095-6181127 33 NZ_CP022991 Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence 266565-266597 8 0.758
NZ_AP022590_9 9.1|2122148|34|NZ_AP022590|CRT 2122148-2122181 34 NZ_CP023068 Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence 1661463-1661496 9 0.735
NZ_AP022590_9 9.1|2122148|34|NZ_AP022590|CRT 2122148-2122181 34 NZ_CP017942 Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence 369234-369267 9 0.735
NZ_AP022590_9 9.6|2122400|34|NZ_AP022590|CRT 2122400-2122433 34 NZ_CP029357 Azospirillum sp. CFH 70021 plasmid unnamed2 451311-451344 10 0.706
NZ_AP022590_9 9.6|2122400|34|NZ_AP022590|CRT 2122400-2122433 34 NZ_CP022925 Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B 24030-24063 10 0.706
NZ_AP022590_12 12.2|5466188|35|NZ_AP022590|CRISPRCasFinder 5466188-5466222 35 MH669001 Mycobacterium phage EleanorGeorge, complete genome 12514-12548 10 0.714
NZ_AP022590_9 9.6|2122400|34|NZ_AP022590|CRT 2122400-2122433 34 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1899831-1899864 11 0.676

1. spacer 9.2|2122208|22|NZ_AP022590|CRT matches to NZ_CP045217 (Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

ggcggcctctgcccgcgcccgt	CRISPR spacer
ggcggcctctgcccgcgtccgc	Protospacer
*****************.***.

2. spacer 9.2|2122208|22|NZ_AP022590|CRT matches to NZ_CP044079 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.909

ggcggcctctgcccgcgcccgt	CRISPR spacer
ggcggcctttgcccgcgcccgg	Protospacer
********.************ 

3. spacer 9.2|2122208|22|NZ_AP022590|CRT matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 2, identity: 0.909

ggcggcctctgcccgcgcccgt	CRISPR spacer
ggcggcctttgcccgcgcccgg	Protospacer
********.************ 

4. spacer 9.2|2122208|22|NZ_AP022590|CRT matches to NZ_CP016620 (Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence) position: , mismatch: 2, identity: 0.909

ggcggcctctgcccgcgcccgt	CRISPR spacer
ggcggcgtctgcccgcgcccgg	Protospacer
****** ************** 

5. spacer 9.3|2122256|22|NZ_AP022590|CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 2, identity: 0.909

agcggccttcgcccgccttcgc	CRISPR spacer
agcggccttcgcccgcattcgg	Protospacer
**************** **** 

6. spacer 9.4|2122304|22|NZ_AP022590|CRT matches to NZ_CP021331 (Maritalea myrionectae strain HL2708#5 plasmid pHL2708X3, complete sequence) position: , mismatch: 2, identity: 0.909

ggcggctttggcctgcttttgg	CRISPR spacer
ggcggcattggcctgcttttga	Protospacer
****** **************.

7. spacer 9.8|2122529|22|NZ_AP022590|CRT matches to NZ_LT960615 (Hartmannibacter diazotrophicus strain E19T plasmid HDIAp1, complete sequence) position: , mismatch: 2, identity: 0.909

ggcggcttcttcctgcgcccga	CRISPR spacer
ggcggcttcttcctccgcccgg	Protospacer
************** ******.

8. spacer 1.1|30872|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 5, identity: 0.848

gccagcgtggcgatcgtgagcgcg-gcggcgcca	CRISPR spacer
gccagcgtggcgatggtgagcgcgcacgttgcc-	Protospacer
************** ********* .** .*** 

9. spacer 1.1|30872|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 5, identity: 0.848

gccagcgtggcgatcgtgagcgcg-gcggcgcca	CRISPR spacer
gccagcgtggcgatggtgagcgcgcacgttgcc-	Protospacer
************** ********* .** .*** 

10. spacer 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 5, identity: 0.848

gccagcgtggcgatcgtgagcgcg-gcggcgcca	CRISPR spacer
gccagcgtggcgatggtgagcgcgcacgttgcc-	Protospacer
************** ********* .** .*** 

11. spacer 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 5, identity: 0.848

gccagcgtggcgatcgtgagcgcg-gcggcgcca	CRISPR spacer
gccagcgtggcgatggtgagcgcgcacgttgcc-	Protospacer
************** ********* .** .*** 

12. spacer 1.1|30872|33|NZ_AP022590|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.818

gccagcgtggcgatcgtgagcgcggcggcgcca--	CRISPR spacer
gccagcttggcgatcgtgaacgcggc--cgtcggc	Protospacer
****** ************.******  **.*.  

13. spacer 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.818

gccagcgtggcgatcgtgagcgcggcggcgcca--	CRISPR spacer
gccagcttggcgatcgtgaacgcggc--cgtcggc	Protospacer
****** ************.******  **.*.  

14. spacer 1.1|30872|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.788

gccagcgtggcgatcgtgagcgcggcggcgcca	CRISPR spacer
gccgcggtggcggtcgtgagcgcggcgacggcg	Protospacer
***.  ******.**************.** *.

15. spacer 1.1|30872|33|NZ_AP022590|CRISPRCasFinder matches to LT559120 (Nonomuraea sp. ATCC 39727 isolate nono1 genome assembly, plasmid: III) position: , mismatch: 7, identity: 0.788

gccagcgtggcgatcgtgagcgcggcggcgcca	CRISPR spacer
gcgggggtggcgatcgtgcgcgcggcgccgtcg	Protospacer
** .* ************ ******** **.*.

16. spacer 9.6|2122400|34|NZ_AP022590|CRT matches to NZ_AP014707 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_3p, complete sequence) position: , mismatch: 7, identity: 0.794

cgcggcgtccgcgtgcgccttctc-----ccgcgcccgc	CRISPR spacer
cgcggcgtcggcgagcgccttctcgaggaccgcg-----	Protospacer
********* *** **********     *****     

17. spacer 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.788

gccagcgtggcgatcgtgagcgcggcggcgcca	CRISPR spacer
gccgcggtggcggtcgtgagcgcggcgacggcg	Protospacer
***.  ******.**************.** *.

18. spacer 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder matches to LT559120 (Nonomuraea sp. ATCC 39727 isolate nono1 genome assembly, plasmid: III) position: , mismatch: 7, identity: 0.788

gccagcgtggcgatcgtgagcgcggcggcgcca	CRISPR spacer
gcgggggtggcgatcgtgcgcgcggcgccgtcg	Protospacer
** .* ************ ******** **.*.

19. spacer 1.1|30872|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gccagcgtggcgatcgtgagcgcgg----cggcgcca	CRISPR spacer
gacagtgtggcgctcgtgagcgcggctttcggt----	Protospacer
* ***.****** ************    ***.    

20. spacer 1.1|30872|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 8, identity: 0.758

gccagcgtggcgatcgtgagcgcggcggcgcca	CRISPR spacer
gagcgcccggtgatcgcgagcgcggcggcgccg	Protospacer
*   ** .**.*****.***************.

21. spacer 9.1|2122148|34|NZ_AP022590|CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 8, identity: 0.765

ggcggcttcggcgcgcgcccgctctaacacctgc	CRISPR spacer
cgcatcctgggcgcgcgcctgctcaaacacctgg	Protospacer
 **. *.* **********.**** ******** 

22. spacer 9.6|2122400|34|NZ_AP022590|CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.765

cgcggcgtccgcgtgcgccttctcccgcgcccgc	CRISPR spacer
gggggtgcgcgcgtgctcctcctcccgcgcccgg	Protospacer
 * **.*. ******* ***.************ 

23. spacer 10.1|2214028|32|NZ_AP022590|CRISPRCasFinder matches to NC_012521 (Rhodococcus opacus B4 plasmid pROB02, complete sequence) position: , mismatch: 8, identity: 0.75

tgcccaaccgccccactcctcctcaggcctac	CRISPR spacer
tgcccaaccgccgcactcatcctcgagcagga	Protospacer
************ ***** *****..**  . 

24. spacer 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gccagcgtggcgatcgtgagcgcgg----cggcgcca	CRISPR spacer
gacagtgtggcgctcgtgagcgcggctttcggt----	Protospacer
* ***.****** ************    ***.    

25. spacer 13.1|6181095|33|NZ_AP022590|CRISPRCasFinder matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 8, identity: 0.758

gccagcgtggcgatcgtgagcgcggcggcgcca	CRISPR spacer
gagcgcccggtgatcgcgagcgcggcggcgccg	Protospacer
*   ** .**.*****.***************.

26. spacer 9.1|2122148|34|NZ_AP022590|CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 9, identity: 0.735

ggcggcttcggcgcgcgcccgctctaacacctgc	CRISPR spacer
ggcggcatcgacgcgcgcccgctccgaggcgtca	Protospacer
****** ***.*************..* .* *  

27. spacer 9.1|2122148|34|NZ_AP022590|CRT matches to NZ_CP017942 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.735

ggcggcttcggcgcgcgcccgctctaacacctgc	CRISPR spacer
ggcggcgtcggtgcgcgcccgctccacggcgtcg	Protospacer
****** ****.************.*  .* *  

28. spacer 9.6|2122400|34|NZ_AP022590|CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 10, identity: 0.706

cgcggcgtccgcgtgcgccttctcccgcgcccgc	CRISPR spacer
gatcgcctccgcgagcgccttctcccgcgcgtcg	Protospacer
 .. ** ****** **************** .  

29. spacer 9.6|2122400|34|NZ_AP022590|CRT matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 10, identity: 0.706

cgcggcgtccgcgtgcgccttctcccgcgcccgc	CRISPR spacer
ggtgttttccgcctgcgccttctccagcgcctct	Protospacer
 *.* . ***** ************ *****. .

30. spacer 12.2|5466188|35|NZ_AP022590|CRISPRCasFinder matches to MH669001 (Mycobacterium phage EleanorGeorge, complete genome) position: , mismatch: 10, identity: 0.714

ggccaccgcctggtgcggctccgctgcccggcccc	CRISPR spacer
cgtcgggcactggtgcgggtccgctgcccggtcca	Protospacer
 *.*.    ********* ************.** 

31. spacer 9.6|2122400|34|NZ_AP022590|CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

cgcggcgtccgcgtgcgccttctcccgcgcccgc	CRISPR spacer
attgcgagtggcgtgcgccttctcctgcacccgc	Protospacer
  .*  . . ***************.**.*****

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5031869 : 5089629 53 Burkholderia_virus(21.43%) protease,holin,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage