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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP022597 Mycobacterium paraintracellulare strain JCM 30622 4 crisprs cas3,csa3,DEDDh,DinG,cas4,WYL,c2c9_V-U4 0 1 4 0

Results visualization

1. NZ_AP022597
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022597_1 1019406-1019503 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022597_2 1229881-1229985 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022597_3 1404874-1405001 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022597_4 3191125-3191207 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_AP022597_1 1.1|1019439|32|NZ_AP022597|CRISPRCasFinder 1019439-1019470 32 MT684600 Streptomyces phage TieDye, complete genome 15325-15356 7 0.781

1. spacer 1.1|1019439|32|NZ_AP022597|CRISPRCasFinder matches to MT684600 (Streptomyces phage TieDye, complete genome) position: , mismatch: 7, identity: 0.781

tggctcgttcaacggccccgacccgcc--ccgat	CRISPR spacer
gatctcgttcaaccgccccaacccgcctgccg--	Protospacer
 . ********** *****.*******  ***  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 453539 : 460610 8 Bacillus_phage(28.57%) NA NA
DBSCAN-SWA_2 990508 : 999191 8 Burkholderia_phage(50.0%) NA NA
DBSCAN-SWA_3 5259484 : 5267633 8 Ostreococcus_tauri_virus(28.57%) NA NA
DBSCAN-SWA_4 5273972 : 5283064 8 Shahe_endorna-like_virus(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage