Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP048796 Providencia vermicola strain P8538 chromosome, complete genome 5 crisprs WYL,DEDDh,csa3,RT,cas3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1 0 15 6 0
NZ_CP048797 Providencia vermicola strain P8538 plasmid p8538-NDM-1, complete sequence 0 crisprs DEDDh 0 0 1 0

Results visualization

1. NZ_CP048796
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048796_1 2741496-2741763 TypeI-F I-F
4 spacers
cas6f,cas7f,cas5f,cas8f,cas3f,cas1

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048796_2 2750776-2750926 TypeI-F I-F
2 spacers
cas1,cas3f,cas8f,cas5f,cas7f,cas6f

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048796_3 2877805-2877881 Orphan I-F
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048796_4 2878170-2879157 Orphan I-F
16 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048796_5 4058747-4058864 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP048796_1 1.3|2741644|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR 2741644-2741675 32 MW057859 Providencia phage PSTCR8lys, complete genome 5758-5789 0 1.0
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NC_017385 Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence 40262-40287 4 0.846
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NC_014626 Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence 91421-91446 4 0.846
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 MN856003 Bacteriophage sp. isolate 1, complete genome 32354-32379 4 0.846
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NZ_CP012910 Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence 204729-204754 4 0.846
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 KJ749827 Escherichia phage ECBP5, complete genome 5226-5251 4 0.846
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NZ_CP024788 Nostoc flagelliforme CCNUN1 plasmid pNFSY03, complete sequence 47585-47610 5 0.808
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NZ_CP024790 Nostoc flagelliforme CCNUN1 plasmid pNFSY05, complete sequence 149530-149555 5 0.808
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NC_010631 Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence 270610-270635 5 0.808
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 JQ182729 Enterobacterial phage mEp390, complete genome 25465-25490 5 0.808
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 JF974339 Enterobacteria phage IME10, complete genome 2910-2935 5 0.808
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NC_017957 Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence 139307-139332 5 0.808
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NC_016158 Escherichia phage HK639, complete genome 40405-40430 5 0.808
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NC_031077 Enterobacter phage Tyrion, complete genome 38148-38173 5 0.808
NZ_CP048796_2 2.2|2750870|26|NZ_CP048796|PILER-CR 2750870-2750895 26 NZ_CP053022 Sphingobium yanoikuyae strain YC-XJ2 plasmid p-A-Sy, complete sequence 85391-85416 5 0.808
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NC_012586 Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence 336345-336370 6 0.769
NZ_CP048796_2 2.1|2750810|26|NZ_CP048796|PILER-CR 2750810-2750835 26 NZ_CP024793 Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence 773007-773032 6 0.769
NZ_CP048796_4 4.9|2878678|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2878678-2878709 32 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 121337-121368 6 0.812
NZ_CP048796_4 4.9|2878678|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2878678-2878709 32 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 52755-52786 6 0.812
NZ_CP048796_4 4.16|2879098|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2879098-2879129 32 NZ_CP018096 Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence 41957-41988 6 0.812
NZ_CP048796_1 1.2|2741584|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR 2741584-2741615 32 NZ_CP046705 Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence 131889-131920 7 0.781
NZ_CP048796_1 1.2|2741584|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR 2741584-2741615 32 NZ_CP026682 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence 2175-2206 7 0.781
NZ_CP048796_1 1.2|2741584|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR 2741584-2741615 32 NC_010631 Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence 44326-44357 7 0.781
NZ_CP048796_1 1.4|2741704|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR 2741704-2741735 32 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 42664-42695 7 0.781
NZ_CP048796_1 1.4|2741704|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR 2741704-2741735 32 NC_007497 Burkholderia phage Bcep176, complete genome 42664-42695 7 0.781
NZ_CP048796_4 4.3|2878318|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2878318-2878349 32 NZ_CP024791 Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence 84696-84727 7 0.781
NZ_CP048796_4 4.5|2878438|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2878438-2878469 32 MN693858 Marine virus AFVG_250M1106, complete genome 35465-35496 7 0.781
NZ_CP048796_4 4.15|2879038|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2879038-2879069 32 NZ_CP011772 Croceicoccus naphthovorans strain PQ-2 plasmid p2, complete sequence 38554-38585 7 0.781
NZ_CP048796_1 1.3|2741644|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR 2741644-2741675 32 MN693045 Marine virus AFVG_25M135, complete genome 31070-31101 8 0.75
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 NZ_CP024788 Nostoc flagelliforme CCNUN1 plasmid pNFSY03, complete sequence 47581-47612 8 0.75
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 NC_047854 Cronobacter phage ESSI-2, complete genome 12717-12748 8 0.75
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 MN856003 Bacteriophage sp. isolate 1, complete genome 32350-32381 8 0.75
NZ_CP048796_4 4.16|2879098|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2879098-2879129 32 NZ_CP047617 Lactococcus raffinolactis strain Lr_19_5 plasmid pLraf_19_5_1, complete sequence 48668-48699 8 0.75
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP037431 Lactobacillus plantarum strain EM plasmid pEM2, complete sequence 27972-28003 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP037431 Lactobacillus plantarum strain EM plasmid pEM2, complete sequence 43203-43234 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NC_021233 Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp1, complete sequence 31453-31484 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP012296 Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence 31188-31219 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP053341 Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence 36632-36663 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP021933 Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence 40561-40592 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP032758 Lactobacillus pentosus strain DSM 20314 plasmid unnamed1, complete sequence 43536-43567 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP014929 Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-5, complete sequence 15597-15628 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP035028 Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence 4479-4510 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP035028 Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence 49896-49927 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP035023 Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC 4479-4510 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP035023 Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC 49897-49928 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP018212 Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence 5398-5429 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP023773 Lactobacillus plantarum strain PC520 plasmid p1, complete sequence 51622-51653 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP032461 Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence 11250-11281 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP032461 Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence 52864-52895 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP032660 Lactobacillus pentosus strain ZFM94 plasmid unnamed1, complete sequence 53575-53606 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP035145 Lactobacillus plantarum strain SRCM103357 plasmid unnamed2 44051-44082 9 0.719
NZ_CP048796_1 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT 2741524-2741555 32 NZ_CP032655 Lactobacillus pentosus strain ZFM222 plasmid unnamed1, complete sequence 58173-58204 9 0.719
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 NC_017385 Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence 40258-40289 9 0.719
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 NZ_CP012910 Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence 204727-204758 9 0.719
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 NZ_CP025613 Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence 222207-222238 9 0.719
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 NC_014626 Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence 91417-91448 9 0.719
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 JQ182729 Enterobacterial phage mEp390, complete genome 25461-25492 9 0.719
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 NC_016158 Escherichia phage HK639, complete genome 40403-40434 9 0.719
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 KJ749827 Escherichia phage ECBP5, complete genome 5224-5255 9 0.719
NZ_CP048796_4 4.13|2878918|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2878918-2878949 32 NZ_CP020331 Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence 29904-29935 9 0.719
NZ_CP048796_4 4.16|2879098|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2879098-2879129 32 MN694411 Marine virus AFVG_250M1188, complete genome 36167-36198 9 0.719
NZ_CP048796_4 4.16|2879098|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2879098-2879129 32 MN693004 Marine virus AFVG_117M22, complete genome 36136-36167 9 0.719
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 NC_031077 Enterobacter phage Tyrion, complete genome 38146-38177 10 0.688
NZ_CP048796_2 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder 2750805-2750836 32 JF974339 Enterobacteria phage IME10, complete genome 2906-2937 10 0.688
NZ_CP048796_4 4.1|2878198|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT 2878198-2878229 32 LR134127 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 7 194476-194507 10 0.688
NZ_CP048796_2 2.4|2750865|32|NZ_CP048796|CRISPRCasFinder 2750865-2750896 32 NZ_CP053022 Sphingobium yanoikuyae strain YC-XJ2 plasmid p-A-Sy, complete sequence 85387-85418 11 0.656

1. spacer 1.3|2741644|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR matches to MW057859 (Providencia phage PSTCR8lys, complete genome) position: , mismatch: 0, identity: 1.0

ttaattattgtcagtggtcttatatattgtgt	CRISPR spacer
ttaattattgtcagtggtcttatatattgtgt	Protospacer
********************************

2. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.846

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gatgcggcgaatgcggcgctgaactc	Protospacer
* ************** ** ***** 

3. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 4, identity: 0.846

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gatgcggcgaatgcggcgctgaactc	Protospacer
* ************** ** ***** 

4. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 4, identity: 0.846

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gctgcggagaatgcggggctgaagtc	Protospacer
******* *********** *** * 

5. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.846

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gatgcggcgaatgcggcgctgaactc	Protospacer
* ************** ** ***** 

6. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to KJ749827 (Escherichia phage ECBP5, complete genome) position: , mismatch: 4, identity: 0.846

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gctgcggagaatgcggggctgaagag	Protospacer
******* *********** ***  *

7. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NZ_CP024788 (Nostoc flagelliforme CCNUN1 plasmid pNFSY03, complete sequence) position: , mismatch: 5, identity: 0.808

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gttgcggcgaattcggggcagaatcc	Protospacer
*.********** **********.. 

8. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NZ_CP024790 (Nostoc flagelliforme CCNUN1 plasmid pNFSY05, complete sequence) position: , mismatch: 5, identity: 0.808

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gttgcggcgaattcggggcagaatcc	Protospacer
*.********** **********.. 

9. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NC_010631 (Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence) position: , mismatch: 5, identity: 0.808

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gttgcggcgaattcggggcagaatcc	Protospacer
*.********** **********.. 

10. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 5, identity: 0.808

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gctgcggagaatgcggggctgaagac	Protospacer
******* *********** ***   

11. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 5, identity: 0.808

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gctgcggagaatgcggggctgaagga	Protospacer
******* *********** ***  .

12. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 5, identity: 0.808

gctgcggcgaatgcggggcagaactg	CRISPR spacer
ggcgcggcgaatgcggggcagatcgc	Protospacer
* .******************* *  

13. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 5, identity: 0.808

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gctgcggagaatgcggggctgaaggc	Protospacer
******* *********** ***   

14. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NC_031077 (Enterobacter phage Tyrion, complete genome) position: , mismatch: 5, identity: 0.808

gctgcggcgaatgcggggcagaactg	CRISPR spacer
gctgcggagaatgcggggctgaatga	Protospacer
******* *********** ***. .

15. spacer 2.2|2750870|26|NZ_CP048796|PILER-CR matches to NZ_CP053022 (Sphingobium yanoikuyae strain YC-XJ2 plasmid p-A-Sy, complete sequence) position: , mismatch: 5, identity: 0.808

tgtcgtagtcaggctcaatgccaaac	CRISPR spacer
gctcctcgtcaggctcaatgccaaaa	Protospacer
  ** * ****************** 

16. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 6, identity: 0.769

gctgcggcgaatgcggggcagaactg	CRISPR spacer
actgcggcgaatgcgcggcagaggat	Protospacer
.************** ******.   

17. spacer 2.1|2750810|26|NZ_CP048796|PILER-CR matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.769

gctgcggcgaatgcggggcagaactg	CRISPR spacer
attgcggcgaattcggggcagaatcc	Protospacer
..********** **********.. 

18. spacer 4.9|2878678|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 6, identity: 0.812

ttatcact-acaccggtcgtgctggatgataaa	CRISPR spacer
-cgtcactcgcacctgtcatgctggatgataaa	Protospacer
 ..***** .**** ***.**************

19. spacer 4.9|2878678|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 6, identity: 0.812

ttatcact-acaccggtcgtgctggatgataaa	CRISPR spacer
-cgtcactcgcacctgtcatgctggatgataaa	Protospacer
 ..***** .**** ***.**************

20. spacer 4.16|2879098|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 6, identity: 0.812

tatcttttgtaactgatacaatatttcctacc	CRISPR spacer
tatcttttttaactgatacaatgttcattaca	Protospacer
******** *************.**. .*** 

21. spacer 1.2|2741584|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046705 (Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence) position: , mismatch: 7, identity: 0.781

taaacaagtattacttgagcatcgtagtgata	CRISPR spacer
tagtcaagtattacttgagcttcgtagcagaa	Protospacer
**. **************** ******... *

22. spacer 1.2|2741584|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026682 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence) position: , mismatch: 7, identity: 0.781

taaacaagtattacttgagcatcgtagtgata	CRISPR spacer
tagtcaagtattacttgagcttcgtagcagaa	Protospacer
**. **************** ******... *

23. spacer 1.2|2741584|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR matches to NC_010631 (Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence) position: , mismatch: 7, identity: 0.781

taaacaagtattacttgagcatcgtagtgata	CRISPR spacer
tagtcaagtattacttgagcttcgtagcagaa	Protospacer
**. **************** ******... *

24. spacer 1.4|2741704|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.781

-gatagatcagagcgtcatgagcgagtctgcgt	CRISPR spacer
gggcggatt-gagcgccatgagcgagactgcgt	Protospacer
 *...***. *****.********** ******

25. spacer 1.4|2741704|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.781

-gatagatcagagcgtcatgagcgagtctgcgt	CRISPR spacer
gggcggatt-gagcgccatgagcgagactgcgt	Protospacer
 *...***. *****.********** ******

26. spacer 4.3|2878318|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 7, identity: 0.781

cagggaaat-----ttccctcagtcgcattattcaaa	CRISPR spacer
-----agatccagattccctcagacgcattattcaaa	Protospacer
     *.**     ********* *************

27. spacer 4.5|2878438|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to MN693858 (Marine virus AFVG_250M1106, complete genome) position: , mismatch: 7, identity: 0.781

ttgtttcaccgtttttgatatattcacctata	CRISPR spacer
aagttaacccgtttttgatatcttcagctata	Protospacer
  ***   ************* **** *****

28. spacer 4.15|2879038|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011772 (Croceicoccus naphthovorans strain PQ-2 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

ccaaaacgc-----cagctccggtgtcccattcgcgg	CRISPR spacer
-----acgttcatgcagccccggtgtcccattcgcgg	Protospacer
     ***.     ****.******************

29. spacer 1.3|2741644|32|NZ_CP048796|CRISPRCasFinder,CRT,PILER-CR matches to MN693045 (Marine virus AFVG_25M135, complete genome) position: , mismatch: 8, identity: 0.75

ttaattattgtcagtggtcttatatattgtgt	CRISPR spacer
ttagttattgttagtggtcttattttgttcat	Protospacer
***.*******.*********** *  * ..*

30. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to NZ_CP024788 (Nostoc flagelliforme CCNUN1 plasmid pNFSY03, complete sequence) position: , mismatch: 8, identity: 0.75

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
aagttgcggcgaattcggggcagaatccgggt	Protospacer
 **.********** **********.. *  *

31. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to NC_047854 (Cronobacter phage ESSI-2, complete genome) position: , mismatch: 8, identity: 0.75

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
cggcgcaggcgaacgcgggccagaactggtgg	Protospacer
*.**   ******.***** **********  

32. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 8, identity: 0.75

cagctgcggcgaatgcggggcagaactggttt---	CRISPR spacer
tggctgcggagaatgcggggctgaa---gtctgcg	Protospacer
..******* *********** ***   **.*   

33. spacer 4.16|2879098|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047617 (Lactococcus raffinolactis strain Lr_19_5 plasmid pLraf_19_5_1, complete sequence) position: , mismatch: 8, identity: 0.75

tatcttttgtaactgatacaatatttcctacc	CRISPR spacer
taaaatatgtaactcatccaatatttcctatg	Protospacer
**   * ******* ** ************. 

34. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP037431 (Lactobacillus plantarum strain EM plasmid pEM2, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

35. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP037431 (Lactobacillus plantarum strain EM plasmid pEM2, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

36. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NC_021233 (Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp1, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

37. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP012296 (Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

38. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP053341 (Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

39. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP021933 (Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

40. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP032758 (Lactobacillus pentosus strain DSM 20314 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

41. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP014929 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-5, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

42. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP035028 (Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

43. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP035028 (Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

44. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP035023 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

45. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP035023 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

46. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP018212 (Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

47. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP023773 (Lactobacillus plantarum strain PC520 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

48. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP032461 (Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

49. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP032461 (Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

50. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP032660 (Lactobacillus pentosus strain ZFM94 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

51. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP035145 (Lactobacillus plantarum strain SRCM103357 plasmid unnamed2) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

52. spacer 1.1|2741524|32|NZ_CP048796|CRISPRCasFinder,CRT matches to NZ_CP032655 (Lactobacillus pentosus strain ZFM222 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

acactattgttttcccttggcgtaaacattca	CRISPR spacer
ttaagttcgttttcccttgacgtaaaaattct	Protospacer
 .*   *.***********.****** **** 

53. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.719

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
tggatgcggcgaatgcggcgctgaactccatc	Protospacer
..* ************** ** *****   *.

54. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.719

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
tggatgcggcgaatgcggcgctgaactccatc	Protospacer
..* ************** ** *****   *.

55. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
cagcggcggcgaatgccgggcagcatgcccat	Protospacer
**** *********** ****** *.   . *

56. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 9, identity: 0.719

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
tggatgcggcgaatgcggcgctgaactccatc	Protospacer
..* ************** ** *****   *.

57. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 9, identity: 0.719

cagctgcggcgaatgcggggcagaactggttt--	CRISPR spacer
tggctgcggagaatgcggggctgaa--gactcag	Protospacer
..******* *********** ***  *..*.  

58. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 9, identity: 0.719

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
tggctgcggagaatgcggggctgaaggcggtg	Protospacer
..******* *********** ***   * * 

59. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to KJ749827 (Escherichia phage ECBP5, complete genome) position: , mismatch: 9, identity: 0.719

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
tggctgcggagaatgcggggctgaagagtata	Protospacer
..******* *********** ***  *  * 

60. spacer 4.13|2878918|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 9, identity: 0.719

tgacaatgcttgttaatcctattatatttata	CRISPR spacer
caaggatgcttgtcagtcctattatattagtg	Protospacer
..* .********.*.************ .*.

61. spacer 4.16|2879098|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to MN694411 (Marine virus AFVG_250M1188, complete genome) position: , mismatch: 9, identity: 0.719

tatcttttgtaactgatacaatatttcctacc	CRISPR spacer
tttctcttgtaactgatacaattttatttgtt	Protospacer
* ***.**************** ** ..*...

62. spacer 4.16|2879098|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to MN693004 (Marine virus AFVG_117M22, complete genome) position: , mismatch: 9, identity: 0.719

tatcttttgtaactgatacaatatttcctacc	CRISPR spacer
tttctcttgtaactgatacaattttatttgtt	Protospacer
* ***.**************** ** ..*...

63. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to NC_031077 (Enterobacter phage Tyrion, complete genome) position: , mismatch: 10, identity: 0.688

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
ttgctgcggagaatgcggggctgaatgagaaa	Protospacer
. ******* *********** ***. .*   

64. spacer 2.3|2750805|32|NZ_CP048796|CRISPRCasFinder matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 10, identity: 0.688

cagctgcggcgaatgcggggcagaactggttt	CRISPR spacer
tggctgcggagaatgcggggctgaaggattac	Protospacer
..******* *********** ***  . * .

65. spacer 4.1|2878198|32|NZ_CP048796|PILER-CR,CRISPRCasFinder,CRT matches to LR134127 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 7) position: , mismatch: 10, identity: 0.688

cttctgtctgctcagttactcttgcatcgatc	CRISPR spacer
taagcgtctgctcggttactcttccatctcac	Protospacer
.   .********.********* ****   *

66. spacer 2.4|2750865|32|NZ_CP048796|CRISPRCasFinder matches to NZ_CP053022 (Sphingobium yanoikuyae strain YC-XJ2 plasmid p-A-Sy, complete sequence) position: , mismatch: 11, identity: 0.656

cttgtcgtagtcaggctcaatgccaaacgtta	CRISPR spacer
aagctcctcgtcaggctcaatgccaaaatgcg	Protospacer
    ** * ******************   ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1472922 : 1524732 77 Escherichia_phage(18.6%) terminase,tail,integrase,lysis,holin attL 1472861:1472878|attR 1525423:1525440
DBSCAN-SWA_2 1605280 : 1616793 15 Bacteriophage(11.11%) lysis NA
DBSCAN-SWA_3 1913803 : 1948928 49 Enterobacteria_phage(28.57%) protease,terminase,tail,portal NA
DBSCAN-SWA_4 2759275 : 2854535 106 Salmonella_phage(25.93%) terminase,tail,integrase,lysis,tRNA,holin,portal,head,plate,capsid attL 2764084:2764099|attR 2791423:2791438
DBSCAN-SWA_5 3002696 : 3049165 44 uncultured_Caudovirales_phage(50.0%) protease,plate NA
DBSCAN-SWA_6 3387255 : 3394135 7 Mycobacterium_phage(28.57%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP048797
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 93793 : 125907 28 Salmonella_phage(33.33%) transposase,integrase attL 117452:117465|attR 126353:126366
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage