CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	2 crisprs	RT	3	4
NZ_CP044489	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-6, complete sequence	0 crisprs	NA	0	0
NZ_CP044484	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-1, complete sequence	0 crisprs	DEDDh,WYL,RT	0	8
NZ_CP044487	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-4, complete sequence	0 crisprs	NA	0	0
NZ_CP044483	Acinetobacter schindleri strain HZE30-1 chromosome, complete genome	1 crisprs	cas3,csa3,DEDDh,WYL	0	4
NZ_CP044488	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-5, complete sequence	0 crisprs	NA	0	0
NZ_CP044490	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-7, complete sequence	1 crisprs	NA	1	0
NZ_CP044486	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-3, complete sequence	0 crisprs	NA	0	0
NZ_CP044491	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-8, complete sequence	0 crisprs	NA	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP044485_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044485_1

16748-16855

Orphan

Consensus_repeat	Method
GTTGCAGTAGATGAACCAGAACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044485_1

>merge|NZ_CP044485|1|16748-16855|CRISPRCasFinder
GTTGCAGTAGATGAACCAGAACAAACGGAAAACCTTATTGCAGTTGATGACACTGAATTTAGTCATGACGAAATGGAAAATCTGGTTGCAGTCGATGAACCAGAACAA

>NZ_CP044485|1|1|16748-16855|CRISPRCasFinder
GTTGCAGTAGATGAACCAGAACAA	ACGGAAAACCTTATTGCAGTTGATGACACTGAATTTAGTCATGACGAAATGGAAAATCTG
GTTGCAGTCGATGAACCAGAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044485.1\|WP_026444410.1\|8552_9578_+\|type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|377390
NZ_CP044485.1\|WP_005248700.1\|17600_17882_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044485.1\|WP_000777554.1\|25809_26283_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	unknown	unknown	gnl\|CDD\|238127
NZ_CP044485.1\|WP_163167839.1\|12205_13630_+\|type-IV-secretion-system-protein-VirB10	unknown	unknown	gnl\|CDD\|319755
NZ_CP044485.1\|WP_000497519.1\|27265_27592_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP044485.1\|WP_004828545.1\|23705_24089_-\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
NZ_CP044485.1\|WP_004828548.1\|23373_23709_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP044485.1\|WP_015060274.1\|17892_19182_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376240
NZ_CP044485.1\|WP_026444411.1\|8229_8529_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044485.1\|WP_005407440.1\|3086_3413_+\|VirB3-family-type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|368285
NZ_CP044485.1\|WP_001206315.1\|24344_25133_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	unknown	unknown	gnl\|CDD\|184296
NZ_CP044485.1\|WP_127801007.1\|19619_21281_-\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP044485.1\|WP_163167876.1\|5779_8227_+\|VirB4-family-type-IV-secretion/conjugal-transfer-ATPase	unknown	unknown	gnl\|CDD\|273346
NZ_CP044485.1\|WP_034429306.1\|13610_14723_+\|P-type-DNA-transfer-ATPase-VirB11	unknown	unknown	gnl\|CDD\|274301
NZ_CP044485.1\|WP_053142621.1\|10452_11301_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226259
NZ_CP044485.1\|WP_127801007.1\|3608_5270_-\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP044485.1\|WP_000071896.1\|26614_27151_+\|class-2-integron-integrase-IntI2	unknown	unknown	gnl\|CDD\|131303
NZ_CP044485.1\|WP_004644764.1\|9589_10291_+\|P-type-DNA-transfer-protein-VirB5	unknown	unknown	gnl\|CDD\|369643
NZ_CP044485.1\|WP_163167837.1\|11312_12206_+\|TrbG/VirB9-family-P-type-conjugative-transfer-protein	unknown	unknown	gnl\|CDD\|274296
NZ_CP044485.1\|WP_000704156.1\|25190_25715_-\|streptothricin-N-acetyltransferase-Sat2	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP044485.1\|WP_026444410.1\|8552_9578_+\|type-IV-secretion-system-protein	gnl\|CDD\|377390	pfam04610, TrbL, TrbL/VirB6 plasmid conjugal transfer protein.	2.62378e-31
NZ_CP044485.1\|WP_000777554.1\|25809_26283_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	gnl\|CDD\|238127	cd00209, DHFR, Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-methylenetetrahydrofolate which is then utilized by thymidylate synthase. Inhibition of DHFR interrupts thymidilate synthesis and DNA replication, inhibitors of DHFR (such as Methotrexate) are used in cancer chemotherapy. 5,6,7,8-tetrahydrofolate also is involved in glycine, serine, and threonine metabolism and aminoacyl-tRNA biosynthesis.	3.39419e-57
NZ_CP044485.1\|WP_163167839.1\|12205_13630_+\|type-IV-secretion-system-protein-VirB10	gnl\|CDD\|319755	cd16429, VirB10, VirB10 forms part of core complex in Type IV secretion system (T4SS). This family contains VirB10, a component of the type IV secretion system (T4SS), including homologs TrbI, TraF, TrwE and TraL. T4S system is employed by pathogenic bacteria to export virulence DNAs and/or proteins directly from the bacterial cytoplasm into the host cell. It forms a large multiprotein complex consisting of 12 proteins termed VirB1-11 and VirD4. VirB10, interacts with VirB7 and VirB9, forming the membrane-spanning 'core complex' (CC), around which all other components assemble. The CC is inserted in both, the outer and inner membranes, playing a fundamental role as a scaffold for the rest of the T4SS components and actively participating in T4S substrate transfer through the bacterial envelope via conformational changes regulating channel opening and closing. TrwE in R33 plasmid has been shown to be anchored to the inner membrane and its C-terminal is necessary for conjugation; the transmembrane domains of TrwB and TrwE are involved in TrwB-TrwE interactions. TraF protein of the RP4 plasmid is involved in circularization of pilin subunits of P-type pili. In gonococcal genetic island (GGI) of Neisseria gonorrhoeae, T4SS encodes TrbI and circularization occurs via a covalent intermediate between the C terminus of putative pilin protein TraA and TrbI.	1.27854e-69
NZ_CP044485.1\|WP_000497519.1\|27265_27592_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	2.82591e-45
NZ_CP044485.1\|WP_004828545.1\|23705_24089_-\|IS66-family-insertion-sequence-hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.30173e-10
NZ_CP044485.1\|WP_127801007.1\|19619_21281_-\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.94756e-149
NZ_CP044485.1\|WP_004828548.1\|23373_23709_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	1.60174e-35
NZ_CP044485.1\|WP_005407440.1\|3086_3413_+\|VirB3-family-type-IV-secretion-system-protein	gnl\|CDD\|368285	pfam05101, VirB3, Type IV secretory pathway, VirB3-like protein. This family includes the Type IV secretory pathway VirB3 protein, that is found associated with bacterial inner and outer membranes. The family also includes the conjugal transfer protein TrbD family that contains a nucleotide binding motif and may provide energy for the export of DNA or the export of other Trb proteins.	1.43212e-15
NZ_CP044485.1\|WP_001206315.1\|24344_25133_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	gnl\|CDD\|184296	PRK13746, PRK13746, aminoglycoside resistance protein; Provisional.	1.61477e-174
NZ_CP044485.1\|WP_015060274.1\|17892_19182_+\|hypothetical-protein	gnl\|CDD\|376240	pfam18821, LPD7, Large polyvalent protein-associated domain 7. This domain contains conserved aspartate and phenylalanine residues. It is widely present in polyvalent proteins and gene neighbourhoods of conjugative elements. This domain is also known as PTox1.	5.14278e-14
NZ_CP044485.1\|WP_163167876.1\|5779_8227_+\|VirB4-family-type-IV-secretion/conjugal-transfer-ATPase	gnl\|CDD\|273346	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family. Type IV secretion systems are found in Gram-negative pathogens. They export proteins, DNA, or complexes in different systems and are related to plasmid conjugation systems. This model represents related ATPases that include VirB4 in Agrobacterium tumefaciens (DNA export) CagE in Helicobacter pylori (protein export) and plasmid TraB (conjugation).	0
NZ_CP044485.1\|WP_034429306.1\|13610_14723_+\|P-type-DNA-transfer-ATPase-VirB11	gnl\|CDD\|274301	TIGR02788, conjugal_transfer_protein, P-type DNA transfer ATPase VirB11. The VirB11 protein is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer. VirB11 is believed to be an ATPase. VirB11 is a homolog of the P-like conjugation system TrbB protein and the Flp pilus sytem protein TadA.	2.69085e-122
NZ_CP044485.1\|WP_053142621.1\|10452_11301_+\|hypothetical-protein	gnl\|CDD\|226259	COG3736, VirB8, Type IV secretory pathway, component VirB8 [Intracellular trafficking and secretion].	4.52239e-41
NZ_CP044485.1\|WP_127801007.1\|3608_5270_-\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.94756e-149
NZ_CP044485.1\|WP_000071896.1\|26614_27151_+\|class-2-integron-integrase-IntI2	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	3.54716e-72
NZ_CP044485.1\|WP_004644764.1\|9589_10291_+\|P-type-DNA-transfer-protein-VirB5	gnl\|CDD\|369643	pfam07996, T4SS, Type IV secretion system proteins. Members of this family are components of the type IV secretion system. They mediate intracellular transfer of macromolecules via a mechanism ancestrally related to that of bacterial conjugation machineries.	7.1909e-45
NZ_CP044485.1\|WP_163167837.1\|11312_12206_+\|TrbG/VirB9-family-P-type-conjugative-transfer-protein	gnl\|CDD\|274296	TIGR02781, Protein_virB9, P-type conjugative transfer protein VirB9. The VirB9 protein is found in the vir locus of Agrobacterium Ti plasmids where it is involved in a type IV secretion system . VirB9 is a homolog of the F-type conjugative transfer system TraK protein (which is believed to be an outer membrane pore-forming secretin, TIGR02756) as well as the Ti system TrbG protein. [Cellular processes, Conjugation].	1.30154e-56
NZ_CP044485.1\|WP_000704156.1\|25190_25715_-\|streptothricin-N-acetyltransferase-Sat2	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.87486e-19

>NZ_CP044485.1|WP_034429306.1|13610_14723_+|P-type-DNA-transfer-ATPase-VirB11
MNSAQNNVLSKDVMVRQLLLPLEKFLKTKGVTEIAINAPNEVWTESNKGWEKHSINLEMGQITALANVIATYTNQRIGQENPILSAQLPDGERIQIVLPPAIENGTVSMTIRIPDESNRSFQEYKDQGFFDHFRYGKSKEFEQFKPVLRTEDIKLVQFLENKDLEGFFKFAVQCKKNIAVVGDTGSGKTTFMKAICQYIPKDERLVTIEDVRELFVPHENKVHLLYSKGGQGKAKVTPSDLIASNMRMKPDRVLLAELRGGEAFDFLKLLTTGHSGSITSYHAESCSLAYDRYVFMCKEHEQANIYDATTLKELVALTIDIIVHVEVKKKYDDESNLIGKERFISEIKFDPVSKVKAQFGDAEIIVGDRA
>NZ_CP044485.1|WP_163167839.1|12205_13630_+|type-IV-secretion-system-protein-VirB10
MNINDQKPLDDQQAPDEEFNESENGIVSVNERGDQEDGKGKKIAFIAVMAVLFTVIAVFAYNFFSDSSDAEEAAQLKENQIDPSLDASAKRRDFTNTDPMPTDAGQNAQFQSLDACQDQSIPRQLTDNNGNALTYNGMLVFQCQNGQQILRQPEAAPVVEQQAANQQPVVIQPQPQQQAQYVPLNNGSRYGGGIFVNPSQQGGAVGQPSSMNHQAAYNQVTGMMKQFEQDQNSNSRSGNFSGSGLMSLAHDDDEPMQQHQPQQATTNMANHSSNKVQARFIGDRNYLIAKGRVIRCNLSVKVVSEIGGMASCVLPQPVYSDNGRVVLAEAGSEVIGEYKSIAAQGQRRLGIIWSRLKTPHGVIVDIDSPAADHLGTGGLSGRVDNRWGARIGAAFMLSLVQDAIAYGISKETGGNNSTPYMLQNTSDMGKSMAETVLNETINIKPTIYKNQGDVASIYVAKDIDFRGVYELRAK
>NZ_CP044485.1|WP_163167837.1|11312_12206_+|TrbG/VirB9-family-P-type-conjugative-transfer-protein
MKKLILALGLAMHGISYAAITPKAMPTDSRIRTINYVPNDVYRITVKKGTVTRIVLGEGERILERGAATGYPSDCEKDDTNWCIFADTGSNLVWVKPKDKATRNNLELRTNKRDYSFDFQVLNNAKEKPMYRVVFKYPQEEEEKRKQEEAQRYNAYAAQLKEESQLTEFLVLQHRLANAAPIPKNWNYRQAANSKGKHFVPEMLFDDGRFTYMRFKGNTDIPVVFIEGTEGEEKVNFHISKEDPKLLIVEALAKKFVLRQGKGVVSIFNESYDPVGVAPQDGTTVEGVKRVITGDMN
>NZ_CP044485.1|WP_053142621.1|10452_11301_+|hypothetical-protein
MNKLKKVSAAEEAKSYEKAMDWEADLIAMRAKSERKAWTIAKVAVGVAVLEAIGLVTLAPMRQTVPVVFTVDKAQGNVEYVGVVDDQQVKGKQELIDKNNITRYVTARESYFYPLLQPDYDLVMTMSSNQVGNDFASLYEGDSARDKKYGKKYELKVDVISVQTNQDETGFTASVRFTKTLHSVEANRDEQPQYYIASIRYEYAPNNLNKLVEKDLIKNPFGFKVVGYRVDPELSPNRPVAQAAVVEPSQQVYVPIQQGGAVVQPQAQQGGAAVQPQAQQGM
>NZ_CP044485.1|WP_004644764.1|9589_10291_+|P-type-DNA-transfer-protein-VirB5
MKKQLLALGLGSSLFISGQANATGIPVIDGANLVQAVQNMVAWGEQYNQMVNQIQQAKQQYDSITGIRGFGDAVNNPYLKDVIPSDVADIYKGIQQGGVNGMTSAARNIRDATMVYDCASRTGQNYKACQAALNNNAQTQALNQQALGVADLRTEQIDNLRKQINNTTDAKAIAELQARIQAEQSQVANDANRIALMQAQAQAQKDAAQQLEIEGRLKRAAQKGNILDGYSGN
>NZ_CP044485.1|WP_026444410.1|8552_9578_+|type-IV-secretion-system-protein
MAIITTLETKIDSLLASYVTGVSSNIASAIVPIALTAATIYILIIGYNIATGAQEDSIYTALWKFFKIAFVGGIALSAGVYQSFVVEAINGLAIGLIQIVSPGGESSLGALLDQVSVPWGELIQKLGEEAESASGVFPDIGLYLSAAVVAVAQFLLFFIGTGLYLLAKISLQLCLGVGPIFILCAMFPATQKYFESWLSQTLSYVFTIGFITAIISMLFAFVSGMCTQITNNFDAGDILTSVVSLCIVAGTIVVIMWNIPTMASAITGGAGVQGVGRAVAQAITKGRGGNNSKSDSASATPTTGGSVQGNSSSSNNSNSSNTGGSKPLYQRHTLSNLKRNK
>NZ_CP044485.1|WP_026444411.1|8229_8529_+|hypothetical-protein
MTKFLALSSLLVISTLTTACSDDKEQVKQLKEEVKAAQQLKPQDLTAEQQEELKQRKARASQKGNILDEYDPSAPQKSVKPETKKGSGNILDGYNPDSK
>NZ_CP044485.1|WP_163167876.1|5779_8227_+|VirB4-family-type-IV-secretion/conjugal-transfer-ATPase
MHPVTRVVPAGGTTSLSDFVSHSNNVIKLKNGEYIATWKLEGISFETVEADIIRIRKEGLNNFYRALGGGHFAVWTHKIRRGVNERLNGVYENDFIADFNERYYQQFQGEKNKQMATELYLTILYRPEISRLTKIFKSKASRDPVALKKQIKRDLDILDDVAKQVEASLYHYNPERLATYTKKGFVYSEMCNLLGFLTNGVWEEIPLRQANLDQYIPSSRLFFGDKNGYLQIKHPEAQKYVGFLDIQEFPRLSESGMCNSILYGNYEYIETQSFTVYGKRDAVDKLKTIKGQLNSVEDVSDQEIRDIDLAMSEANSGNFQLGEYHYTLAIFGDSPNQVALNVSSARTALSDEAGFKMAVIDTVPECAWFSQLAGNFNMRPREAYLTSLNFSALSPFHNFARGKRDGNPWGEALALFKTPSGQPFYFNHHVSPDKQDSTDDKMPGNTCVIGTTGVGKTTLVMAMMMFACKYKNLKGVFFDKDRGAEIGIRRIGGQYYALERGVPTGFNPLQLPPTETNIQFVEKLVKILVGGVRNAAEDLEISQAVRTIMRDDMPLELRRLSALYMNLKVNGGGDSLQDRLAKWCNTADHDGNLSWVFDNPYDTQDFSKAKMPIFGYDYTEFLDDPEVRTPIMAYLLHITDSLIDGSPFIYWMDEFWKPLTDEYFKDFAKDKQKTIRKLNGLGVFMTQSPSDVLDSDIGKTMVEQSVTQIFLPNPRADYDDYVNGFKVTPQEFEIIRELEENSRMFLVKQGSRSALCKMDLGEMRDVLQIISGSKDNLELLENLMNEVGEDPNDWGELFLQRIAERKKLISEKGVA
>NZ_CP044485.1|WP_127801007.1|3608_5270_-|group-II-intron-reverse-transcriptase/maturase
MNAAVSACAPSSTSWDSIDWIAVQRHVRGLQARIVKAVQDGRHNKAKALQWLLTHSFSGKALAVKRVSENKGKNTAGVDKVTWNTPKAKTGAMMSLKRRGYTPLPLRRVLIPKKNGKMRPLGIPTMKCRAMQALHLLALEPIAETIADRNSYGFRPQRSTADAAAQCFGVLSRKVSAEWVLEGDIQGCFDNISHDWMIANLPMDKVILRKWLKAGYVYQSKLFPSLSGTPQGGIISPVLANMTLDGLETMLAKRFPNAKWTGKKLQLVRYADDFIITGYSKEWLENEVRPAVVEFLAQRGLVLSQEKTKITHIGNGFDFLGWNVRKYNGKLLIKPSKANISAHLDKLRALINANKATRQATLIGLLNPILRGWANYHSYVVAKKVFNQVDSAVWEMLWRWAVRRHPRKTLRWVKDRYFKVQGARRWVFSCDEQSADGRKRQYTLVSASDTPIVRHIKIKAAANPHDPAWDEYFESRWGKRMLVSAKGRAKLYRVWLKQGGRCCACLKPVTKDTPWHSRHIVKLSHGGTDAVANLEIYHLYCPRSVQFANVNDV
>NZ_CP044485.1|WP_005407440.1|3086_3413_+|VirB3-family-type-IV-secretion-system-protein
MSNFSDPIFRGCTRPAMLFGVPMLPFLLVTGVAILLAGWSFYLLSAYVTLFIAAIYVPIYFWMRAITKVDDQRLKQVLMRWRIRGKQIQNHQKWGAISFSPLKLKKRK
>NZ_CP044485.1|WP_005248700.1|17600_17882_+|hypothetical-protein
MKKISLTLISLALSFSVVGCTSNKAVTSPNGFSSKAVNQPDTVKNYMQSIAVYQQNKDLSTETERQIALLTDKYIQTKMIIDEAARRQNISNQ
>NZ_CP044485.1|WP_015060274.1|17892_19182_+|hypothetical-protein
MTEANKVDKPSFNKEQTGYTKLGQTLETNQAEVNSIEKAENIDISKSTKGINQDPEETKVTDTKKLKADDSKESSEEGIPKALLNKYYVVDDKYHFKGNPEKVAFEDSGKALKTTIDDKHIAASMVEVAKAKKWETIQVKGSEEFKRNVWLEASMKGMTVKGYEPRDIDLALLNDMKKEQGKEVVHNTIEKGNERQKEKPLNEKDKVDPAQERKEKINNLSEQEKALLTVFDKKMKADGFTEKQRTASIDVAVEQLNQKKMHVGKLVDHGEAPYKHDPKNNSSYYATIENSKGEKSTIWAKDLERTLKEQNIIKNDDIVLTYKGSNKVEVNTKEIDPKTGLPTGARVQTLANKGKWEAQSLSKLKETTEKALTKNDKTKLQIQHNADIQNQKFHKPKLTAYDANAPKQQPVQQPQVKTQERNKNKDISR
>NZ_CP044485.1|WP_127801007.1|19619_21281_-|group-II-intron-reverse-transcriptase/maturase
MNAAVSACAPSSTSWDSIDWIAVQRHVRGLQARIVKAVQDGRHNKAKALQWLLTHSFSGKALAVKRVSENKGKNTAGVDKVTWNTPKAKTGAMMSLKRRGYTPLPLRRVLIPKKNGKMRPLGIPTMKCRAMQALHLLALEPIAETIADRNSYGFRPQRSTADAAAQCFGVLSRKVSAEWVLEGDIQGCFDNISHDWMIANLPMDKVILRKWLKAGYVYQSKLFPSLSGTPQGGIISPVLANMTLDGLETMLAKRFPNAKWTGKKLQLVRYADDFIITGYSKEWLENEVRPAVVEFLAQRGLVLSQEKTKITHIGNGFDFLGWNVRKYNGKLLIKPSKANISAHLDKLRALINANKATRQATLIGLLNPILRGWANYHSYVVAKKVFNQVDSAVWEMLWRWAVRRHPRKTLRWVKDRYFKVQGARRWVFSCDEQSADGRKRQYTLVSASDTPIVRHIKIKAAANPHDPAWDEYFESRWGKRMLVSAKGRAKLYRVWLKQGGRCCACLKPVTKDTPWHSRHIVKLSHGGTDAVANLEIYHLYCPRSVQFANVNDV
>NZ_CP044485.1|WP_004828548.1|23373_23709_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MIRIDEIWLSTQPLDMRAGMDTVMAQVVRAFGYIKPHCAYLFCNKRGHRMKVLVHDGLGIWLCARRLEQGKFHWAKVHQGESVALNPEQLQALIQGLPWQRIGRQQVVTML
>NZ_CP044485.1|WP_004828545.1|23705_24089_-|IS66-family-insertion-sequence-hypothetical-protein
MTTNHQTSIASLAKKRRTYSAEFKQQIVQACKAPDVSIASVALQHGLNTNLVSKWIRLIDAKPGSDRSPLPNKPAFIALSCSAPLDPTPTDMLKVQITLPHSKAEIGLKWQVSEIPALAELLKVLAT
>NZ_CP044485.1|WP_001206315.1|24344_25133_-|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1
MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK
>NZ_CP044485.1|WP_000704156.1|25190_25715_-|streptothricin-N-acetyltransferase-Sat2
MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSPYRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAHSLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNETAMYWYWFSGAQDDA
>NZ_CP044485.1|WP_000777554.1|25809_26283_-|trimethoprim-resistant-dihydrofolate-reductase-DfrA1
MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGRKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEIYKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG
>NZ_CP044485.1|WP_000071896.1|26614_27151_+|class-2-integron-integrase-IntI2
MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQTMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRLPSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGKGGKSRNSLLPTRLIPAIK
>NZ_CP044485.1|WP_000497519.1|27265_27592_+|tyrosine-type-recombinase/integrase
MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGLMLLINQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP044485_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044485_2

28382-28521

Orphan

Consensus_repeat	Method
CCCAGTTCCCAACTATTTTGTCA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP044485_2

>merge|NZ_CP044485|2|28382-28521|PILER-CR
AGTTCCAAACTATTTTGTCATTTTTAATTTTCGTATTAGCTTACGACGCTACACCCAGTTCCCATCTATTTTGTCACTCTTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCCAGTTCCCAACTATTTTGTCC

>NZ_CP044485|2|1|28382-28521|PILER-CR
AGTTCCAAACTATTTTGTCATTT	TTAATTTTCGTATTAGCTTACGACGCTACACCC
AGTTCCCATCTATTTTGTCACTC	TTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCC
AGTTCCCAACTATTTTGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044485.1\|WP_163167849.1\|35453_36164_-\|thin-pilus-assembly-periplasmic-chaperone-AcuD	unknown	unknown	gnl\|CDD\|236634
NZ_CP044485.1\|WP_163167853.1\|39004_39571_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP044485.1\|WP_015060274.1\|17892_19182_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376240
NZ_CP044485.1\|WP_163167841.1\|30842_31127_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|225072
NZ_CP044485.1\|WP_000497519.1\|27265_27592_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP044485.1\|WP_001067856.1\|29791_30496_-\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP044485.1\|WP_163167851.1\|36206_36809_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP044485.1\|WP_004828545.1\|23705_24089_-\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
NZ_CP044485.1\|WP_127801007.1\|19619_21281_-\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP044485.1\|WP_001353740.1\|27779_28019_-\|DUF1819-family-protein	unknown	unknown	gnl\|CDD\|378066
NZ_CP044485.1\|WP_004828548.1\|23373_23709_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP044485.1\|WP_001206315.1\|24344_25133_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	unknown	unknown	gnl\|CDD\|184296
NZ_CP044485.1\|WP_000704156.1\|25190_25715_-\|streptothricin-N-acetyltransferase-Sat2	unknown	unknown	gnl\|CDD\|366181
NZ_CP044485.1\|WP_005248689.1\|28844_29231_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044485.1\|WP_163167845.1\|31802_32873_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP044485.1\|WP_034686370.1\|29241_29475_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044485.1\|WP_163167847.1\|32873_35426_-\|thin-pilus-assembly-outer-membrane-usher-AcuC	unknown	unknown	gnl\|CDD\|225729
NZ_CP044485.1\|WP_000071896.1\|26614_27151_+\|class-2-integron-integrase-IntI2	unknown	unknown	gnl\|CDD\|131303
NZ_CP044485.1\|WP_000777554.1\|25809_26283_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	unknown	unknown	gnl\|CDD\|238127
NZ_CP044485.1\|WP_163167843.1\|31080_31347_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937

Protein	Function_ID	Function_description	E-value
NZ_CP044485.1\|WP_163167849.1\|35453_36164_-\|thin-pilus-assembly-periplasmic-chaperone-AcuD	gnl\|CDD\|236634	PRK09926, PRK09926, fimbrial chaperone.	5.49536e-63
NZ_CP044485.1\|WP_163167853.1\|39004_39571_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	2.17479e-54
NZ_CP044485.1\|WP_015060274.1\|17892_19182_+\|hypothetical-protein	gnl\|CDD\|376240	pfam18821, LPD7, Large polyvalent protein-associated domain 7. This domain contains conserved aspartate and phenylalanine residues. It is widely present in polyvalent proteins and gene neighbourhoods of conjugative elements. This domain is also known as PTox1.	5.14278e-14
NZ_CP044485.1\|WP_163167841.1\|30842_31127_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|225072	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning].	6.57448e-07
NZ_CP044485.1\|WP_000497519.1\|27265_27592_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	2.82591e-45
NZ_CP044485.1\|WP_001067856.1\|29791_30496_-\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.05999e-69
NZ_CP044485.1\|WP_004828545.1\|23705_24089_-\|IS66-family-insertion-sequence-hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.30173e-10
NZ_CP044485.1\|WP_127801007.1\|19619_21281_-\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.94756e-149
NZ_CP044485.1\|WP_001353740.1\|27779_28019_-\|DUF1819-family-protein	gnl\|CDD\|378066	pfam08849, DUF1819, Putative inner membrane protein (DUF1819). These proteins are functionally uncharacterized. Several are annotated as putative inner membrane proteins.	2.15941e-15
NZ_CP044485.1\|WP_004828548.1\|23373_23709_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	1.60174e-35
NZ_CP044485.1\|WP_001206315.1\|24344_25133_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	gnl\|CDD\|184296	PRK13746, PRK13746, aminoglycoside resistance protein; Provisional.	1.61477e-174
NZ_CP044485.1\|WP_000704156.1\|25190_25715_-\|streptothricin-N-acetyltransferase-Sat2	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.87486e-19
NZ_CP044485.1\|WP_163167851.1\|36206_36809_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	3.88414e-05
NZ_CP044485.1\|WP_163167845.1\|31802_32873_-\|fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	3.43033e-11
NZ_CP044485.1\|WP_163167847.1\|32873_35426_-\|thin-pilus-assembly-outer-membrane-usher-AcuC	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	3.15317e-160
NZ_CP044485.1\|WP_000071896.1\|26614_27151_+\|class-2-integron-integrase-IntI2	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	3.54716e-72
NZ_CP044485.1\|WP_000777554.1\|25809_26283_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	gnl\|CDD\|238127	cd00209, DHFR, Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-methylenetetrahydrofolate which is then utilized by thymidylate synthase. Inhibition of DHFR interrupts thymidilate synthesis and DNA replication, inhibitors of DHFR (such as Methotrexate) are used in cancer chemotherapy. 5,6,7,8-tetrahydrofolate also is involved in glycine, serine, and threonine metabolism and aminoacyl-tRNA biosynthesis.	3.39419e-57
NZ_CP044485.1\|WP_163167843.1\|31080_31347_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	8.8678e-17

>NZ_CP044485.1|WP_001353740.1|27779_28019_-|DUF1819-family-protein
MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKENVLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC
>NZ_CP044485.1|WP_000497519.1|27265_27592_+|tyrosine-type-recombinase/integrase
MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGLMLLINQ
>NZ_CP044485.1|WP_000071896.1|26614_27151_+|class-2-integron-integrase-IntI2
MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQTMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRLPSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGKGGKSRNSLLPTRLIPAIK
>NZ_CP044485.1|WP_000777554.1|25809_26283_-|trimethoprim-resistant-dihydrofolate-reductase-DfrA1
MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGRKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEIYKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG
>NZ_CP044485.1|WP_000704156.1|25190_25715_-|streptothricin-N-acetyltransferase-Sat2
MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSPYRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAHSLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNETAMYWYWFSGAQDDA
>NZ_CP044485.1|WP_001206315.1|24344_25133_-|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1
MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK
>NZ_CP044485.1|WP_004828545.1|23705_24089_-|IS66-family-insertion-sequence-hypothetical-protein
MTTNHQTSIASLAKKRRTYSAEFKQQIVQACKAPDVSIASVALQHGLNTNLVSKWIRLIDAKPGSDRSPLPNKPAFIALSCSAPLDPTPTDMLKVQITLPHSKAEIGLKWQVSEIPALAELLKVLAT
>NZ_CP044485.1|WP_004828548.1|23373_23709_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MIRIDEIWLSTQPLDMRAGMDTVMAQVVRAFGYIKPHCAYLFCNKRGHRMKVLVHDGLGIWLCARRLEQGKFHWAKVHQGESVALNPEQLQALIQGLPWQRIGRQQVVTML
>NZ_CP044485.1|WP_127801007.1|19619_21281_-|group-II-intron-reverse-transcriptase/maturase
MNAAVSACAPSSTSWDSIDWIAVQRHVRGLQARIVKAVQDGRHNKAKALQWLLTHSFSGKALAVKRVSENKGKNTAGVDKVTWNTPKAKTGAMMSLKRRGYTPLPLRRVLIPKKNGKMRPLGIPTMKCRAMQALHLLALEPIAETIADRNSYGFRPQRSTADAAAQCFGVLSRKVSAEWVLEGDIQGCFDNISHDWMIANLPMDKVILRKWLKAGYVYQSKLFPSLSGTPQGGIISPVLANMTLDGLETMLAKRFPNAKWTGKKLQLVRYADDFIITGYSKEWLENEVRPAVVEFLAQRGLVLSQEKTKITHIGNGFDFLGWNVRKYNGKLLIKPSKANISAHLDKLRALINANKATRQATLIGLLNPILRGWANYHSYVVAKKVFNQVDSAVWEMLWRWAVRRHPRKTLRWVKDRYFKVQGARRWVFSCDEQSADGRKRQYTLVSASDTPIVRHIKIKAAANPHDPAWDEYFESRWGKRMLVSAKGRAKLYRVWLKQGGRCCACLKPVTKDTPWHSRHIVKLSHGGTDAVANLEIYHLYCPRSVQFANVNDV
>NZ_CP044485.1|WP_015060274.1|17892_19182_+|hypothetical-protein
MTEANKVDKPSFNKEQTGYTKLGQTLETNQAEVNSIEKAENIDISKSTKGINQDPEETKVTDTKKLKADDSKESSEEGIPKALLNKYYVVDDKYHFKGNPEKVAFEDSGKALKTTIDDKHIAASMVEVAKAKKWETIQVKGSEEFKRNVWLEASMKGMTVKGYEPRDIDLALLNDMKKEQGKEVVHNTIEKGNERQKEKPLNEKDKVDPAQERKEKINNLSEQEKALLTVFDKKMKADGFTEKQRTASIDVAVEQLNQKKMHVGKLVDHGEAPYKHDPKNNSSYYATIENSKGEKSTIWAKDLERTLKEQNIIKNDDIVLTYKGSNKVEVNTKEIDPKTGLPTGARVQTLANKGKWEAQSLSKLKETTEKALTKNDKTKLQIQHNADIQNQKFHKPKLTAYDANAPKQQPVQQPQVKTQERNKNKDISR
>NZ_CP044485.1|WP_005248689.1|28844_29231_+|hypothetical-protein
MTNADFKLLVESLGFYNPEAIRDYFKAIGFNESINVRPIQYWLNGKSVALNMPIPDDVVEHFKQLEQMKIELSGQEKFKKNCFLYKDKYLMWEKFPELEGLPSTYLNQLMVLVNMLHGYREMQYCTSY
>NZ_CP044485.1|WP_034686370.1|29241_29475_+|hypothetical-protein
MKNQDLSIVELISKRNKIVYTVCGLLVLLTILSFARYFLNFSILYLLILLIPFFVLMYWMIRVTEHIKDEKNLKESS
>NZ_CP044485.1|WP_001067856.1|29791_30496_-|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFET
>NZ_CP044485.1|WP_163167841.1|30842_31127_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MNNIIHSRFVASVSELKKNPMEVVNNGFGEAVAILNRNNPAFYCVPADMYERLMDLVEDRELLKLAEQIDTEETVKVSINDLRARVRKNSSEKV
>NZ_CP044485.1|WP_163167843.1|31080_31347_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTYELEFAKTALKKFDKLNPQIAEQFIRKLEAILENPKIPKNKLRGSTDIYKIKLRSVGYRLVYQVIDDRIVVLVLDVDRRDTIYKNM
>NZ_CP044485.1|WP_163167845.1|31802_32873_-|fimbrial-protein
MYKKIALGLLCLLAFASKTHADCFARTNPVNFTANLTKAHSDNAYLQLVSQTIAASAAQPIDSCNSGNGPSTFTMNAVTDLMTNSTFPKGDYTYYQIPPANITPASPNMKVYIAFSVKDNQNTATERWINSSTDSYELFNGYSDTRGLRLQDIRLLVSGLGNSAGVYTISNLRLGSFSASDRSRTWWGGIVGATASTSIRLNTTTFQVKKSTCIVNNGAAINVNLPTIPSSSFTAPAQTIGDTAFTVNVSGCSLEDSNKTLLALLTDNNNSSASNTNGLLKNIHSANVSVQITDNAGNALPIAPKNINSSDSFFDFGIIGSSGTVSKGFKARYYSNVGAVPATLVQAQATITLIYN
>NZ_CP044485.1|WP_163167847.1|32873_35426_-|thin-pilus-assembly-outer-membrane-usher-AcuC
MKIGYSSSFILFILLVSNTYASAESDISGQDTDKMLAQNNKTILTFNSSSLFGGQSQSVDLSIFRSANYVAEGAYIVDTTVNDRSIGELKLLFKHLDANPTAVLCIDADMLKRLDLQSHYLDSLAKKDCLTIKDISPNAYYDFDLSTQKIAIYIPQKFVVDRPAGYIDPALFDPGITSAFVGYNANFNQNDQEDSKYLALTAGLNVNGWYFRHAGNFDSKDSGLGTYRSYQNVLYRDITAINARISGGQFNTSSLQTESLPIVGVQLASDLSMLPWSMRSYAPVIENVANTNALVRVFQNGQKIYEKTVPAGPFRITDLTSFASGAMTLEITENGGEKKTYIIPVQNNMNLLKYGQKTFSIALGNYKTIEKLTDDSVLQGSYNYGLNNYLTLLSGINLTEDYQGVLLGAGLNTFFGGISIKTNASQATWLNQDYNGHKIALDYSYYLPAYKMNFYANAQNQTRHYLTASNLLSYKNYDYLNTDELNDLSLTADLRNQINFSLSKSFDNPRVGAFSVGFLVSDYWNSDNNRYQYNLSYGNSWKRLSYSIGFSQTNYKENTFDKDHSVYASLSLPLDFRKSNLNLNSTYQQGEQQGRDSDSFGAYLSGTAGSNNNLNFGLGATSNRFDGSTNTSYNANVNYLLPQVNLGATVYHANQDTQYSLSAQGAIVAHRHGITATNTAADTYTIIHVDHGAGASIDNAWGIKLDRWGNAIYPNASAYSINTISINPDQLPPEITLDGNQTQVIPRMYSSTLATFKVNQQSNILMRIHSKNTQQFPMGSRIETSSGNLIGLMGQSNQSLLTHDIRDLKEPLKVVWGDQLKQSCNIPITEFDSVVKKKNSQLDILNVECH
>NZ_CP044485.1|WP_163167849.1|35453_36164_-|thin-pilus-assembly-periplasmic-chaperone-AcuD
MRKIHFLVGSIFLFTQYVFAGVSIDGTRIIFPSNAKSVSVQLRNEFATPALVQTWIDQGDMSTIPSADQIPFVLTPPLARVESKKGQIIRIIPTGSPVLPQDRESLYWFNMLDIPPEDPANAGKNILTFNVRSRIKLFYRPTSLKMSSDKAFASIRYNYNNNTQDVTLDNPTPYFVTVTKAEFKNQNQTASYTADAVMLVPFSKLTLNQFKLNFQPNRMIYTIINDLGGSQTFEVK
>NZ_CP044485.1|WP_163167851.1|36206_36809_-|type-1-fimbrial-protein
MKKLNLALLTITLSAVGTTTSVFAADGTITVNGKVVSSTCTLSGSSGASGTGSNVALTLNTVRNDAFNTVGSVQAQKSFTLSVTNSGGSAVCDAVTIGGIKNITLSGTSGTDYDVTNKTYLINQDTTAPTTKDVYVQILGTDLTTPIDFSSTKQLGAPTITGSGASTTGTYTLAARYISNKVSPAAQTVLAKINYTLEYN
>NZ_CP044485.1|WP_163167853.1|39004_39571_+|recombinase-family-protein
MKGQKVGYVRVSSVEQNTGRQLEGIEVDRIFVDRASGKNTDRPKFQEMLNYVREGDRVIVHSMDRFARSLKDLVTEVDKLVKRGIAIQFVKENITFTAESTPMDNLMLQMMGAFAQFERELILERQKEGIKLASAQGKYKGRVHKLKPDQAEALRQAWKEGKYPSKMALGKAFGISRQAVYRYLQVSE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	MK978162	Acinetobacter lwoffii strain M2a plasmid pAVAci14, complete sequence	29968-30027	0	1.0
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	NC_019218	Uncultured bacterium HHV35 plasmid pHHV35, complete sequence	3048-3107	0	1.0
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	NZ_CP044465	Acinetobacter schindleri strain HZE23-1 plasmid pHZE23-1-2, complete sequence	6424-6483	0	1.0
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	16772-16831	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10387-10419	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72648-72680	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15133-15165	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62060-62092	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28402-28434	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25816-25848	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23240-23272	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57315-57347	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64739-64771	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95158-95190	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41349-41381	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10767-10799	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13633-13665	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10830-10862	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10767-10799	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15396-15428	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172056-172088	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68063-68095	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74789-74821	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78315-78347	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89271-89303	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152291-152323	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17850-17882	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75880-75912	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40084-40116	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42453-42485	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13464-13496	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12090-12122	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57128-57160	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42619-42651	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38153-38185	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10525-10557	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49215-49247	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140941-140973	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46467-46499	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150963-150995	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7471-7503	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116699-116731	0	1.0
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42620-42652	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10443-10483	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40020-40060	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72704-72744	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42389-42429	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15189-15229	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62116-62156	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13400-13440	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28458-28498	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25872-25912	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23296-23336	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12026-12066	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57371-57411	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64795-64835	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95214-95254	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57064-57104	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41405-41445	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10823-10863	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42555-42595	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13689-13729	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10886-10926	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10823-10863	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38089-38129	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10461-10501	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15452-15492	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172112-172152	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68119-68159	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74845-74885	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78371-78411	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49151-49191	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140877-140917	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46403-46443	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150899-150939	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89327-89367	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7407-7447	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152347-152387	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17906-17946	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116635-116675	0	1.0
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42556-42596	0	1.0
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	NZ_CP041290	Acinetobacter indicus strain 94-2 plasmid p94-2-tetX3, complete sequence	50-109	1	0.983
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	KT325596	Uncultured bacterium plasmid pFK2-7, complete sequence	2877-2936	1	0.983
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	NZ_CP038024	Acinetobacter radioresistens strain DD78 plasmid pAR2, complete sequence	29857-29916	1	0.983
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	NZ_CP010903	Acinetobacter nosocomialis strain 6411 plasmid p6411-66.409kb, complete sequence	25665-25724	1	0.983
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052804	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence	113091-113123	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP038508	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence	228634-228666	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052788	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence	321488-321520	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052786	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence	10079-10111	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052838	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence	13470-13502	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP051676	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence	201786-201818	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052779	Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence	212524-212556	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052832	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence	277011-277043	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73380-73412	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052806	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence	282696-282728	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052818	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence	1788-1820	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87104-87136	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052795	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence	166287-166319	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP047882	Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence	264306-264338	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052802	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence	197576-197608	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052840	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence	9544-9576	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052836	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence	222743-222775	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052828	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence	8856-8888	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052826	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence	292607-292639	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP016409	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence	299316-299348	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	299920-299952	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP016413	Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence	295999-296031	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_CP016411	Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence	293612-293644	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	CP052814	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence	281790-281822	2	0.939
NZ_CP044485_2	2.1\|28405\|33\|NZ_CP044485\|PILER-CR	28405-28437	33	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61314-61346	2	0.939
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75936-75976	2	0.951
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73436-73476	2	0.951
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87160-87200	2	0.951
NZ_CP044485_2	2.2\|28461\|41\|NZ_CP044485\|PILER-CR	28461-28501	41	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61250-61290	2	0.951
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	NC_019217	Uncultured bacterium HHV216 plasmid pHHV216, complete sequence	2670-2729	11	0.817
NZ_CP044485_1	1.1\|16772\|60\|NZ_CP044485\|CRISPRCasFinder	16772-16831	60	NC_019299	Uncultured bacterium HH1107 plasmid pHH1107, complete sequence	2670-2729	11	0.817

1. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to MK978162 (Acinetobacter lwoffii strain M2a plasmid pAVAci14, complete sequence) position: , mismatch: 0, identity: 1.0

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	Protospacer
************************************************************

2. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to NC_019218 (Uncultured bacterium HHV35 plasmid pHHV35, complete sequence) position: , mismatch: 0, identity: 1.0

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	Protospacer
************************************************************

3. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to NZ_CP044465 (Acinetobacter schindleri strain HZE23-1 plasmid pHZE23-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	Protospacer
************************************************************

4. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	Protospacer
************************************************************

5. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

6. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

7. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

8. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

9. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

10. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

11. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

12. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

13. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

14. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

15. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

16. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

17. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

18. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

19. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

20. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

21. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

22. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

23. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

24. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

25. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

26. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

27. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

28. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

29. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

30. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

31. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

32. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

33. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

34. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

35. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

36. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

37. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

38. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

39. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

40. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

41. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

42. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

43. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

44. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

45. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

46. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

47. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

48. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

49. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

50. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

51. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

52. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

53. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

54. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

55. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

56. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

57. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

58. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

59. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

60. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

61. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

62. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

63. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

64. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

65. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

66. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

67. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

68. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

69. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

70. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

71. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

72. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

73. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

74. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

75. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

76. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

77. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

78. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

79. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

80. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

81. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

82. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to NZ_CP041290 (Acinetobacter indicus strain 94-2 plasmid p94-2-tetX3, complete sequence) position: , mismatch: 1, identity: 0.983

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatcta	Protospacer
***********************************************************.

83. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to KT325596 (Uncultured bacterium plasmid pFK2-7, complete sequence) position: , mismatch: 1, identity: 0.983

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
acggaaaaccttattgcagttgatgacattgaatttagtcatgacgaaatggaaaatctg	Protospacer
****************************.*******************************

84. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to NZ_CP038024 (Acinetobacter radioresistens strain DD78 plasmid pAR2, complete sequence) position: , mismatch: 1, identity: 0.983

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
acggaaaaccttattgcagttgatgacactcaatttagtcatgacgaaatggaaaatctg	Protospacer
****************************** *****************************

85. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to NZ_CP010903 (Acinetobacter nosocomialis strain 6411 plasmid p6411-66.409kb, complete sequence) position: , mismatch: 1, identity: 0.983

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
acagaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	Protospacer
**.*********************************************************

86. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

87. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

88. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

89. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

90. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

91. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

92. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

93. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

94. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

95. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

96. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

97. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

98. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

99. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

100. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

101. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

102. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

103. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

104. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

105. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

106. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

107. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

108. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

109. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

110. spacer 2.1|28405|33|NZ_CP044485|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

111. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccaccctc	Protospacer
***************************************..

112. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

113. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

114. spacer 2.2|28461|41|NZ_CP044485|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

115. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to NC_019217 (Uncultured bacterium HHV216 plasmid pHHV216, complete sequence) position: , mismatch: 11, identity: 0.817

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
ttggaaaaccttatttcagttgatgacactgaatttagttatgacgaaatggatgccgaa	Protospacer
 .************* ***********************.************* . .  .

116. spacer 1.1|16772|60|NZ_CP044485|CRISPRCasFinder matches to NC_019299 (Uncultured bacterium HH1107 plasmid pHH1107, complete sequence) position: , mismatch: 11, identity: 0.817

acggaaaaccttattgcagttgatgacactgaatttagtcatgacgaaatggaaaatctg	CRISPR spacer
ttggaaaaccttatttcagttgatgacactgaatttagttatgacgaaatggatgccgaa	Protospacer
 .************* ***********************.************* . .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 5270

Pseudomonas_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026444413.1\|1969_2647_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_004644768.1\|2781_3087_+	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_005407440.1\|3086_3413_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_127801007.1\|3608_5270_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.6e-170	54.9

DBSCAN-SWA_2

19619 : 21281

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_127801007.1\|19619_21281_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.6e-170	54.9

DBSCAN-SWA_3

25809 : 55534

Virus_Rctr41k(15.38%)

transposase,integrase

attL 15262:15277|attR 55024:55039

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
15262:15277	attL	NA	NA	NA	NA
WP_000777554.1\|25809_26283_-	trimethoprim-resistant dihydrofolate reductase DfrA1	G3MBI7	Bacillus_virus	3.7e-19	32.1
WP_000071896.1\|26614_27151_+\|integrase	class 2 integron integrase IntI2	A0A1P8DJJ6	Virus_Rctr41k	6.9e-14	34.4
WP_000497519.1\|27265_27592_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.1e-18	52.0
WP_001353740.1\|27779_28019_-	DUF1819 family protein	NA	NA	NA	NA
WP_005248689.1\|28844_29231_+	hypothetical protein	NA	NA	NA	NA
WP_034686370.1\|29241_29475_+	hypothetical protein	NA	NA	NA	NA
WP_001067856.1\|29791_30496_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	6.9e-139	100.0
WP_163167841.1\|30842_31127_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_163167843.1\|31080_31347_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	2.1e-16	52.4
WP_163167845.1\|31802_32873_-	fimbrial protein	NA	NA	NA	NA
WP_163167847.1\|32873_35426_-	thin pilus assembly outer membrane usher AcuC	NA	NA	NA	NA
WP_163167849.1\|35453_36164_-	thin pilus assembly periplasmic chaperone AcuD	NA	NA	NA	NA
WP_163167851.1\|36206_36809_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_163167853.1\|39004_39571_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	3.1e-25	50.8
WP_005176773.1\|39780_40323_-	cysteine hydrolase	NA	NA	NA	NA
WP_004733158.1\|40407_41292_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_163167855.1\|41424_42396_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_163167857.1\|43045_43798_-	hypothetical protein	NA	NA	NA	NA
WP_163167859.1\|44627_45702_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.3e-43	39.2
WP_005254593.1\|46281_46560_-\|transposase	transposase	U5P4I9	Shigella_phage	8.7e-21	65.0
WP_127800883.1\|46852_47155_+	hemolysin	NA	NA	NA	NA
WP_127800881.1\|47374_47677_+	hemolysin	NA	NA	NA	NA
WP_163167861.1\|48565_49270_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	8.8e-118	84.1
WP_000214122.1\|50521_51736_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7
WP_163167863.1\|52239_52404_+\|transposase	transposase	A0A2P1JR32	Mycobacterium_phage	3.0e-05	51.2
WP_000691727.1\|52498_54418_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	100.0
WP_001791010.1\|54433_54550_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_171521752.1\|54901_55534_+	DUF4113 domain-containing protein	A0A2H4JBL5	uncultured_Caudovirales_phage	5.0e-56	49.5
55024:55039	attR	NA	NA	NA	NA

DBSCAN-SWA_4

59721 : 60498

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015060288.1\|59721_60498_-	ParA family protein	A0A1X9I765	Streptococcus_phage	2.9e-13	26.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP044483

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP044483_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044483_1

3013731-3013860

Orphan

Consensus_repeat	Method
CAAAGCACTGCTTTGCATGCTCGCAAGACTAGAGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044483_1

>merge|NZ_CP044483|1|3013731-3013860|CRISPRCasFinder
CAAAGCACTGCTTTGCATGCTCGCAAGACTAGAGCTGGGCTCGAAGTGGAAATGTAAAGCACTGCTTTTACATTGATGCAAGAAGGTAAATAGTCAAAGCACTGCTTTGCATGCTCGCAAGACGAGAGCT

>NZ_CP044483|1|1|3013731-3013860|CRISPRCasFinder
CAAAGCACTGCTTTGCATGCTCGCAAGACTAGAGCT	GGGCTCGAAGTGGAAATGTAAAGCACTGCTTTTACATTGATGCAAGAAGGTAAATAGT
CAAAGCACTGCTTTGCATGCTCGCAAGACGAGAGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044483.1\|WP_004890907.1\|3021798_3022134_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044483.1\|WP_004890882.1\|3011395_3011683_-\|DUF2798-domain-containing-protein	unknown	unknown	gnl\|CDD\|378657
NZ_CP044483.1\|WP_163167606.1\|3004936_3006268_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369540
NZ_CP044483.1\|WP_163167620.1\|3020414_3020855_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP044483.1\|WP_004813864.1\|3014770_3015622_-\|phosphatidylserine-decarboxylase	unknown	unknown	gnl\|CDD\|234591
NZ_CP044483.1\|WP_111810238.1\|3017961_3018492_-\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NZ_CP044483.1\|WP_004890874.1\|3008645_3009185_+\|DUF924-domain-containing-protein	unknown	unknown	gnl\|CDD\|377592
NZ_CP044483.1\|WP_004813846.1\|3002213_3004094_-\|DNA-topoisomerase-IV-subunit-B	unknown	unknown	gnl\|CDD\|235501
NZ_CP044483.1\|WP_004890871.1\|3006857_3008435_-\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|235001
NZ_CP044483.1\|WP_163167622.1\|3022545_3023772_-\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP044483.1\|WP_071320130.1\|3006311_3006839_-\|disulfide-bond-formation-protein-B	unknown	unknown	gnl\|CDD\|235294
NZ_CP044483.1\|WP_163167612.1\|3014063_3014678_+\|SPOR-domain-containing-protein	unknown	unknown	gnl\|CDD\|225629
NZ_CP044483.1\|WP_108619325.1\|3009234_3009789_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044483.1\|WP_163167608.1\|3009797_3011099_+\|DUF445-family-protein	unknown	unknown	gnl\|CDD\|377281
NZ_CP044483.1\|WP_163167604.1\|3004095_3004689_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|182945
NZ_CP044483.1\|WP_004813874.1\|3021175_3021655_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044483.1\|WP_163167616.1\|3016631_3017843_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235406
NZ_CP044483.1\|WP_163167618.1\|3018677_3020192_-\|catalase	unknown	unknown	gnl\|CDD\|163710
NZ_CP044483.1\|WP_163167614.1\|3015618_3016467_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP044483.1\|WP_163167610.1\|3011938_3013729_+\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|223097

Protein	Function_ID	Function_description	E-value
NZ_CP044483.1\|WP_004890882.1\|3011395_3011683_-\|DUF2798-domain-containing-protein	gnl\|CDD\|378657	pfam11391, DUF2798, Protein of unknown function (DUF2798). This family of proteins has no known function.	9.95209e-14
NZ_CP044483.1\|WP_163167606.1\|3004936_3006268_+\|hypothetical-protein	gnl\|CDD\|369540	pfam07819, PGAP1, PGAP1-like protein. The sequences found in this family are similar to PGAP1. This is an endoplasmic reticulum membrane protein with a catalytic serine containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body.	1.03633e-35
NZ_CP044483.1\|WP_163167620.1\|3020414_3020855_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	1.3764e-87
NZ_CP044483.1\|WP_163167604.1\|3004095_3004689_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|182945	PRK11071, PRK11071, esterase YqiA; Provisional.	4.88926e-42
NZ_CP044483.1\|WP_111810238.1\|3017961_3018492_-\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	8.4281e-20
NZ_CP044483.1\|WP_004890874.1\|3008645_3009185_+\|DUF924-domain-containing-protein	gnl\|CDD\|377592	pfam06041, DUF924, Bacterial protein of unknown function (DUF924). This family consists of several hypothetical bacterial proteins of unknown function. Structurally, this family resembles TPR-like repeats.	4.15391e-90
NZ_CP044483.1\|WP_004813846.1\|3002213_3004094_-\|DNA-topoisomerase-IV-subunit-B	gnl\|CDD\|235501	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed.	0
NZ_CP044483.1\|WP_004890871.1\|3006857_3008435_-\|glutamate--cysteine-ligase	gnl\|CDD\|235001	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional.	0
NZ_CP044483.1\|WP_163167622.1\|3022545_3023772_-\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.15222e-99
NZ_CP044483.1\|WP_071320130.1\|3006311_3006839_-\|disulfide-bond-formation-protein-B	gnl\|CDD\|235294	PRK04388, PRK04388, disulfide bond formation protein B; Provisional.	3.79544e-44
NZ_CP044483.1\|WP_163167612.1\|3014063_3014678_+\|SPOR-domain-containing-protein	gnl\|CDD\|225629	COG3087, FtsN, Cell division protein [Cell division and chromosome partitioning].	1.15498e-15
NZ_CP044483.1\|WP_163167608.1\|3009797_3011099_+\|DUF445-family-protein	gnl\|CDD\|377281	pfam04286, DUF445, Protein of unknown function (DUF445). Predicted to be a membrane protein.	1.37283e-81
NZ_CP044483.1\|WP_004813864.1\|3014770_3015622_-\|phosphatidylserine-decarboxylase	gnl\|CDD\|234591	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed.	7.05657e-163
NZ_CP044483.1\|WP_163167616.1\|3016631_3017843_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|235406	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional.	0
NZ_CP044483.1\|WP_163167618.1\|3018677_3020192_-\|catalase	gnl\|CDD\|163710	cd08154, catalase_clade_1, Clade 1 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 1 catalases are found in bacteria, algae, and plants; they have a relatively small subunit size of 55 to 69 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. They appear to form tetramers. In eukaryotic cells, catalases are located in peroxisomes.	0
NZ_CP044483.1\|WP_163167614.1\|3015618_3016467_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	6.84148e-64
NZ_CP044483.1\|WP_163167610.1\|3011938_3013729_+\|arginine--tRNA-ligase	gnl\|CDD\|223097	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].	1.65465e-174

>NZ_CP044483.1|WP_163167610.1|3011938_3013729_+|arginine--tRNA-ligase
MNTAIQAALDHAVQTLQAQNVLPSDWNNTSNLTRTKDRSHGDFASNIAMIASKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQQATYGRTQANAEKRIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATSTYLRYLELTGQELVFPKNAYQGDYVKEIAQSIIDQDGDAYVRPVADVYKDVPEDVQFAAEPDAEGNKVVLSGDKEKHIDGLIFNSQSLIGEGYRVFHQAALKAILDDIKDDLGEFGVTFNQWFSEASLTEKIEEALQTLDQRGFLYEKDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDIIDIWGSDHHGYIARVKAAIDALGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAIATGVNFDAVAARGLAAKLELDAETEILAKLAAYPEIVVRAANSYEPHQVGNYLKELAALFHGWYNENKVLGDDAELTQARLLLSVNVRQVLRNGLELLGVSAPESM
>NZ_CP044483.1|WP_004890882.1|3011395_3011683_-|DUF2798-domain-containing-protein
MDSQQRPVIFGNTPKLPAKWALIIIPFILSCLMSGIISFINMLRTLGWIEGFISLWLHNWMISWAFAFPIVLLLLPFVRKLTGLLVDMSGSQLPK
>NZ_CP044483.1|WP_163167608.1|3009797_3011099_+|DUF445-family-protein
MQTETSSPSLQRSKRFATIALIVAVVTWLALMVAAKLLPEYVWLIHILMLSAEAGVVGGMADWYAITVLFRNPFGKLPIPRFLRDHTEIIPRNKARIAESMGRFVQENFLSPQIVERSLASTDLSLAAGRWLANPENNRQVTQVIQQTAPRIFEFVGQEQISGFIQSNSVQWVKSTQINHLASEMLRAVLENDFHQDVLQRGLDLAHAWMTSHPEQTRELTRTLFKEMGVWKLAKGASWIGIDVQQRSIDSVIQRVEAMLADPDHPWRLKIEESAHQLMLQLADNDSDASQRLNSAKDALLDSPQVLNFISGAVVILCDAIKADLEKPDSGIAENLRIAIQQVGENIISNSSVRELLNNRMSNMAVDLSDQYSEKVIRFISERIHEWDSREMIDKIENEVGGDLHMIRVNGVVVGAFIGLVLGIIRAIVEYVL
>NZ_CP044483.1|WP_108619325.1|3009234_3009789_+|hypothetical-protein
MKKTIIALAFASTALLSGCATTPSKPLTFDQLGQYSTTPLNAQTYRISFKARPNMSFGTAEEITLVKAAQTTIQNGFQFFRVLDDPSNRTQRPPREAIVYPTPMPYPYGYYRRHPFYWPDPFYDMPYRVTVEPAQIAYTIECFKQGQAPKDAFDARLILQSLGAKYGLSPTGEILQPQPVTMTK
>NZ_CP044483.1|WP_004890874.1|3008645_3009185_+|DUF924-domain-containing-protein
MNYQDILDFWFSAENQPNWFAKSDHFDQSLTEQFSEILEQASQAELWSWRKTAEGRLAEIIVLDQFSRNIFRGTARAFAQDSLALALAQEAISLDLDKQLSPEQRAFLYMPFMHSESRLIHEYAFKLFQRLGNPSNLEYEIKHKIIIERFGRYPHRNQILGRESTEEELSFLTQPDSSF
>NZ_CP044483.1|WP_004890871.1|3006857_3008435_-|glutamate--cysteine-ligase
MSQPESTSQAVLPTWVDSSLIKGMLRGIERESLRMQGNGFLSQRPHPVALGSALTHPHITTDYSEALMEFITPPKDSIRGALDYLMDIHAIVHRKLEDEEKLWPMSMPCMLDSSDDSIPLAQYGSSNIGLFKTLYRRGLGVRYGRRMQTISGVHYNLSFPDHFFEALQANESDESLRNLSLQDYRSHRYMGLIRNFIRLTPLVMFLVGASPAVCQCFMTGRDHQLLPLTRGTLYTPYSTALRMGRFGYQNSAQKQLGIHYNNLQDYLEGLQKAVKTPYKQFTRLGLEDAAGQPIQINDHVLQIENEYYSLVRPKQVPEAGETPSQALANRGIGYVELRAVDVNPYSPIGIDEHTAGFLEVVALYCLLQDSPALLSDEQDIIEKNQAEVVNRGRAPNAAILENGQKYLIEDWCAVHLARMQPLAELLDAAYGNNLYTTAMKTMQIRVDEVDATLSALVVGDIRKQGGMWHFGQVLAQQHAAVYQAHQLSKKTTAYFDELVQKSLQQQQELEQDSSISFAEYLAQFR
>NZ_CP044483.1|WP_071320130.1|3006311_3006839_-|disulfide-bond-formation-protein-B
MKWGYRFVSGALFAASVMGMAFALYLEHVQGLEPCPLCIFQRIGLIGLGIISFIAFLHNPKANGMKRLYAFLGSLSILWSAGVAGRHVWLQNLPPDKVPSCGPGLDYWLETLPMKSVFQQVLSGSGECAKVDWTFLGQSLPVWSLVFFCILLLVSLWQLFRKYQTAPVKRLRDKY
>NZ_CP044483.1|WP_163167606.1|3004936_3006268_+|hypothetical-protein
MTSLTPLHETYCKWDRTPPTQADVLEGLAQLVTMRFNDVAQELIKTIQREILYSFFGLSERHSEKIQNLPAIVRLYQRSYDLLFHYGNTMVAPGLRRIITKFPRLHDKPLTPSLHFLVSVLNGIIGDYLIKHQNPMALPMVIYDHYTLLQQGELTGRITIFVHGLCMNHLTWSNHKHEGIGEKLLTQRDNNTMLYLNYNSGRRISANGRSLANTLHDLITRNPGITSIDLIGHSMGGLVARSALFYGKQHVYEWVNMVDNLVCLGSPHHGAALERFGFSLQDKLGRFPFGKIIGHVVNIRSNGILDLRHGSVRDDDWEHNEVRIGLMDDNRKPAPIPSHIQTYLVAGTIEYENRHNRTRNVIGDYLVSVKSALGEHPNPRFQLKVPDSHKAIFYGLNHFEIRFHPQVAEQIVRWFYPSVEDKVFDQIHEYMMDLESVEGIALT
>NZ_CP044483.1|WP_163167604.1|3004095_3004689_-|alpha/beta-fold-hydrolase
MNVIYLHGFRSSAASIKGQLLRQYCEKNPQIQVHLPDLNMSPVDTIQHMSALIESLDNVSLVGSSLGGFYATHLVAKYSVPAVLINPAMRPWQLFRELFDDELPLQVHPNWRLDDSHLDQLEGLALPTAQDADKILVLLQQGDEVLDYREAHRYYSAAHPPAMLMTEANGNHGMDDFAEKIPLVLQFLLDCIKKETE
>NZ_CP044483.1|WP_004813846.1|3002213_3004094_-|DNA-topoisomerase-IV-subunit-B
MSQYTAQSLEVLSGLDPVRRRPGMYTDTTRPNHLAQEVIDNAVDEALAGHANKITVTVYKDGSLSVEDNGRGMPVDIHPEYGQSGIEIILTKLHAGGKFSTDNYQFSGGLHGVGISVVNALSTRVEVAVQRQGNLYKMAFENGEPVAPLEVLAGKAPKRASGTTVQFWPEAKYFDSPKFALKALKHNLKAKAVLAAGLEINYIDQINDEKITWQFENGLVDYLMDELEDREIIPAPAFVATGDAERASAEFAICWNVEGGESIQESYVNLIPTAQGGTHVNGLRSGVTDAMREFCELRNLLPRNMKLSAEDVWDGVNYILSLKFQEPQFSGQTKERLSSREAVGVVQNIAKDAFALWLNQNSDIAMQLAEMAISKAGRRLKAAKKVERKKIVAGPTLPGKLSDCVGHDLDQSELFIVEGDSAGGSAKQARDKNFQAIMPIRGKILNTWEVSSDEVLASQEVHNIAIAIGVDPGSDDLSELRYGKICILADADSDGLHIATLLCALFVKHFPTLVEEGHLYVAMPPLFRIDDNKDVHYALDEDELNSILKKCKTKNPQITRFKGLGEMNASQLRETTLDPNTRRLVQLDLDDAHHTAGLLDKLLAKKRASDRKDWLEQKGNLADLVV
>NZ_CP044483.1|WP_163167612.1|3014063_3014678_+|SPOR-domain-containing-protein
MFGKTQRGVSERPNKPKKPLIPAWLGTLVIILIVLSFLVALMLWKPWEPVKPNNDQITSQHYEEEDTNKDYRFYDLLPKQQVTPIPEQAVPETNKQDAVVIVEAPQTEEAASETVNEPGLVTEEPAAPVATYILQVRSFDDPDQADARRAEIILNGLSADVVRSVENGKVWYRVVSGPYDSVEAAVIAQQTLQHSGIDSIVVKQ
>NZ_CP044483.1|WP_004813864.1|3014770_3015622_-|phosphatidylserine-decarboxylase
MSITSRLKQQLFIQAQKVVPQHRLSRVVGKIAASENPVVKTAVISAFKAKYGIDMSIAEQTNALKFKSFNDFFTRGLRTGVRAVDADQGSIVSPADGAISQLGKIENGDVFQAKGQKFTVENLIADPQLAQPFKNGEFATVYLSPRDYHRVHMPFAGTLTETLYVPGELFSVNQTTAENIPGLFARNERMVCLFDTELGRMAVVLVGAMIVAGIETVATGKVKPSGRIELNQHNLFLEKGAELGRFYLGSTAVILFEENKMQWDEKFKANSTVLMGEALGHTV
>NZ_CP044483.1|WP_163167614.1|3015618_3016467_-|sulfurtransferase
MTASAFNLGLLIETEDLVPHLGNEKLRIVDLSRASVYEQLHIPHALHLQPKMLVRQEEQALGLLPDQEGLEALVRYLNISPEHHVVAYDDEGGAWAGRLLWNLHCLGFENTSLLNGGIHAWLAAGLPTSSDPVKLEPVEQLVQINLNQENAVRIDYEALRQQVEQGQIQLWDCRTEDEYTGLRLTARRGGHIPGARHFEWSTALNRENHLKLHPLQRTQQRLEQLGFNLKQPVVVYCQSHHRSGLAYILGRLLGWKIQAYDGAWSEWGNRLDSPIATGELPS
>NZ_CP044483.1|WP_163167616.1|3016631_3017843_-|nicotinate-phosphoribosyltransferase
MASIIQSLLDTDLYKFTMLQVVLHKFPQTHSLYHFRCRNLEDTVYPLTDILDDLNHQLDLLCQLKFKEDELQYLRSLRFIKSDFVDYLELFQLKRRFIKATIDSEGRLDITVEGPMVQAMMFEIFVLAIVNELYFSRIRTPEVLIEGERRLQAKMELLKQYDASQDSNDPPFLVSDFGTRRRYSFEWQKHVVEEFNKAAPQVFRGTSNVLLAKELGITPIGTMAHEFLQAFQALDVRLRDFQKAALETWVQEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYEWGDKAYAHYKKLKIDSKTKMLTFSDGLNLEKAWKLHQYFKDRFQVSFGIGTNLTNDMGQTPLNIVLKLVECNRQSVAKISDSPGKTMTDNDTFLAYLRQVFDISEVAEQ
>NZ_CP044483.1|WP_111810238.1|3017961_3018492_-|ankyrin-repeat-domain-containing-protein
MKFMPEAFLASILAFSSAFATAAEVKSISPAKTAASVQMTSQQELVDLFFAAAKIGNSEVINEFLKHGFPVDVRNKDGYTPLMMATYYGHQSIVTTLLKHGADRCARDNRGNTALMGALFKMEFAIAKQLRQMDCDAQAKKAGQKTTAEFAKVIGQEKQLQKIIQEAEKPKTKADK
>NZ_CP044483.1|WP_163167618.1|3018677_3020192_-|catalase
MFKRSLLVAMLATVTAAQAAPLTKDNGAPVGDNQNSITAGPNGSVLLQDVQLVQKLQRFGRERIPERVVHARGTGAYGEFVATKDLSDLTLASLFKAGTKTPVFLRFSTVIHGKGSPETLRDPHGFAVKFYTQEGNWDLVGNQTPVFFIRDAIKFPDFIHAMKPSPVTNVQDANRVFDFLSSQPWATNMLTYVYGKQGVPTSYREQDGFGVHAYKLYNDKGEYKYVKFNFRSKQGVKGLNVKEAAEQQGKDFNHLTNDLYNNIYAGNFPKWDLYIQVIDPKDLGKFDFDPLDPTKIWPTELVPETKVGTLTLNRMPKNFFNETEQSAFAPGNLVPGIEPSEDRLLQGRIFSYSDTQMYRLGANHQQIPVNRPVVNVNNNNQDGYMNVSERDSDVNYEPSRKEPKAATEKARAVQTPLSGHVQQIGVKEQNFKQAGELYRSYTAKEKDDLIMNLAADLGAVKDSETKHIMLSYFYKADADYGTRMTKAVNGNLATVKAKAAKLKD
>NZ_CP044483.1|WP_163167620.1|3020414_3020855_+|D-tyrosyl-tRNA(Tyr)-deacylase
MRALLQRVLEAKVVVEGETTGEIQHGILVFLGIGKEDTLEKGQKLIDKILKYRFFDDEQGKMGWNVAQAGGGLLLVSQFTLMAQTQKGLRPDFGPAMPPAEAKDLYEQLVEYAQSQFDHVQTGIFAADMKVHLVNDGPVTFNLEVE
>NZ_CP044483.1|WP_004813874.1|3021175_3021655_-|hypothetical-protein
MKLSSIPVLKLPLVDLSTDPLDLLVAGLALRMKQLARTSPKFIELVHERQFRIQIGTDEGLARQIIVNNGDIDTVSGNAEPADFVLQFADSEQGVKTLMKGDPTAFMTGMQNGTIKMEGDFGLLVWFNQVAKMLPPKLPKPVKEKVKLVRQFIKEKTGK
>NZ_CP044483.1|WP_004890907.1|3021798_3022134_-|hypothetical-protein
MVTANLATIVGFSLVAAAVLVVFFSPYRRWLSFMVAGMFTWGLIEVIRLGTQTLFELPMTYGYLAALSSVMVIVTLLLLREDRRAERALAKRRCIEHTPVYEDDQQQLSSR
>NZ_CP044483.1|WP_163167622.1|3022545_3023772_-|phosphoserine-phosphatase-SerB
MREIILISFLGPDQPNQFTRLMRVLSAHSLQILDVGQAVIHNQLTLGIVVSSDDQTATALAMKEILILAHDIGLTVRFKPISVTEYNQWVKEGGQTRYIVTALAPELKASHLQAVTQIVSSQGFNIETVTRLSGRPVLDGDDAEAGPKRACVQFSLKGQMLDAAAMRTACLSLSTALNVDVAVQEDNVYRRNRRLVCFDMDSTLIEQEVIDELAIEAGVGAQVAEITERAMQGELDFQQSFRARVALLKGMDASVLPKIAERLTITEGAERLISTLKALGYRTAILSGGFQYFAEHLQAKLGIDEVHANVLDVEDGMVTGEVKGHIVDGARKAHLLMTIAEEMGISLEQAIAVGDGANDLPMLSIAGLGVAFRAKPLVRQNANQAISSVGLDGVLYLLGVHDKDLSRA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

453441 : 521000

uncultured_Caudovirales_phage(36.36%)

head,portal,integrase,holin,terminase,capsid,tRNA,tail,protease

attL 455453:455467|attR 489709:489723

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163164871.1\|453441_454899_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_171521693.1\|455211_457167_+	lytic transglycosylase domain-containing protein	A0A0S2SXL7	Bacillus_phage	3.6e-12	37.0
455453:455467	attL	NA	NA	NA	NA
WP_163164875.1\|457198_457837_+	ribonuclease I	NA	NA	NA	NA
WP_004809714.1\|458010_458997_+	malate dehydrogenase	NA	NA	NA	NA
WP_004809710.1\|459166_459445_+	DUF2789 family protein	NA	NA	NA	NA
WP_004809708.1\|459499_459754_+	DUF2789 family protein	NA	NA	NA	NA
WP_004809704.1\|459871_460129_+	DUF2789 family protein	NA	NA	NA	NA
WP_108619613.1\|460197_460725_-	hypothetical protein	NA	NA	NA	NA
WP_163164877.1\|460784_461387_-	2OG-Fe(II) oxygenase	NA	NA	NA	NA
WP_163164879.1\|461501_462359_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_004809697.1\|462396_463215_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_163164881.1\|463233_464310_+	hypothetical protein	NA	NA	NA	NA
WP_163164883.1\|470344_471961_+	Na/Pi symporter	NA	NA	NA	NA
WP_163164885.1\|471923_473306_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
WP_008304907.1\|473559_473982_-	hypothetical protein	NA	NA	NA	NA
WP_004816001.1\|473974_474310_-	TIGR01244 family phosphatase	NA	NA	NA	NA
WP_163164887.1\|474434_475331_+	alpha/beta fold hydrolase	A2RQC8	Archaeal_BJ1_virus	1.1e-29	35.5
WP_005223287.1\|475331_475763_+	thioredoxin TrxC	A0A1V0SD63	Indivirus	2.2e-10	31.2
WP_005223285.1\|475783_476209_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_163164889.1\|476411_476924_-	DUF4442 domain-containing protein	NA	NA	NA	NA
WP_004816006.1\|476951_477440_-	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA
WP_004816007.1\|477531_477846_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_163164891.1\|478029_479928_-	FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_163164893.1\|479967_480492_-	hypothetical protein	NA	NA	NA	NA
WP_163164896.1\|480497_480800_-	hypothetical protein	NA	NA	NA	NA
WP_004816013.1\|480828_481440_-	septation protein IspZ	NA	NA	NA	NA
WP_163164898.1\|481484_482336_+	PHP domain-containing protein	NA	NA	NA	NA
WP_004816019.1\|483448_484360_-	bestrophin	NA	NA	NA	NA
WP_163164900.1\|484428_485127_-	DNA repair protein RadC	NA	NA	NA	NA
WP_005223254.1\|485240_486515_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	5.6e-38	31.7
WP_005223251.1\|486717_487221_+	hypothetical protein	NA	NA	NA	NA
WP_163164902.1\|487278_488307_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_163164904.1\|488425_489595_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4J8L8	uncultured_Caudovirales_phage	2.7e-79	42.6
WP_163164906.1\|489704_490253_+	hypothetical protein	NA	NA	NA	NA
489709:489723	attR	NA	NA	NA	NA
WP_163164908.1\|490276_490450_+	hypothetical protein	NA	NA	NA	NA
WP_163164911.1\|490478_490745_-	hypothetical protein	NA	NA	NA	NA
WP_163164914.1\|490741_491032_-	hypothetical protein	A0A2H4J3E7	uncultured_Caudovirales_phage	2.4e-21	96.5
WP_163164916.1\|491028_491397_-	hypothetical protein	NA	NA	NA	NA
WP_163164918.1\|491386_492013_-	3'-5' exoribonuclease	A0A2I7R2S7	Vibrio_phage	8.8e-21	34.9
WP_163164920.1\|492009_492510_-	hypothetical protein	NA	NA	NA	NA
WP_163164922.1\|492499_492793_-	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_163164924.1\|492789_492981_-	hypothetical protein	NA	NA	NA	NA
WP_163164926.1\|492974_493145_-	hypothetical protein	NA	NA	NA	NA
WP_163164928.1\|493141_493321_-	hypothetical protein	NA	NA	NA	NA
WP_163164930.1\|493317_493533_-	hypothetical protein	NA	NA	NA	NA
WP_163164932.1\|493849_494569_-	hypothetical protein	NA	NA	NA	NA
WP_163164934.1\|494796_495024_+	hypothetical protein	NA	NA	NA	NA
WP_163164936.1\|495070_495565_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_163164938.1\|495561_496491_+	toprim domain-containing protein	A0A0R6PGJ5	Moraxella_phage	5.0e-44	39.9
WP_163164940.1\|496487_498236_+	hypothetical protein	A0A0R6PCH4	Moraxella_phage	2.1e-88	34.8
WP_163164942.1\|498222_498576_+	hypothetical protein	NA	NA	NA	NA
WP_163164944.1\|498589_499057_+	hypothetical protein	NA	NA	NA	NA
WP_163164946.1\|499208_499415_+	hypothetical protein	NA	NA	NA	NA
WP_163164948.1\|499374_499959_+	HNH endonuclease	Q38456	Bacillus_phage	3.6e-24	45.2
WP_163164950.1\|500416_500941_+\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_163164952.1\|500951_502787_+\|terminase	terminase large subunit	A0A141GEV8	Brucella_phage	3.0e-101	40.0
WP_163164954.1\|502783_504052_+\|portal	phage portal protein	A0A1P8DTI5	Proteus_phage	5.0e-47	31.0
WP_163164956.1\|504026_504767_+\|head,protease	HK97 family phage prohead protease	A0A286S1N1	Klebsiella_phage	7.8e-16	33.2
WP_163167700.1\|504872_506156_+\|capsid	phage major capsid protein	A0A2H4PI18	Pseudomonas_phage	2.0e-35	38.2
WP_163164958.1\|506235_506532_+\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_163164960.1\|506533_506767_+	hypothetical protein	NA	NA	NA	NA
WP_163164962.1\|506776_507127_+\|head	phage head closure protein	NA	NA	NA	NA
WP_163164964.1\|507117_507546_+	HK97 gp10 family phage protein	A0A2H4J6A2	uncultured_Caudovirales_phage	1.6e-13	38.6
WP_163164966.1\|507542_507911_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_163164968.1\|507965_508502_+	hypothetical protein	NA	NA	NA	NA
WP_163164970.1\|508575_509106_+\|tail	phage tail assembly chaperone family protein, TAC	NA	NA	NA	NA
WP_163164972.1\|509114_509264_+	hypothetical protein	NA	NA	NA	NA
WP_163164974.1\|509329_509665_+	hypothetical protein	NA	NA	NA	NA
WP_163164976.1\|509723_513608_+	transglycosylase SLT domain-containing protein	A0A2H4JDA4	uncultured_Caudovirales_phage	2.5e-113	33.3
WP_163164978.1\|513649_514861_+	hypothetical protein	A0A2H4J690	uncultured_Caudovirales_phage	1.7e-132	57.5
WP_163164980.1\|514860_515781_+	phage BR0599 family protein	A0A2H4J350	uncultured_Caudovirales_phage	1.6e-143	82.0
WP_163164399.1\|515788_516094_+	hypothetical protein	A0A2H4J8S6	uncultured_Caudovirales_phage	9.9e-34	67.0
WP_163164982.1\|516090_516279_+	hypothetical protein	NA	NA	NA	NA
WP_163164984.1\|516265_518983_+	hypothetical protein	A0A2H4J328	uncultured_Caudovirales_phage	8.6e-254	52.4
WP_163164986.1\|518979_519930_+	hypothetical protein	NA	NA	NA	NA
WP_034702970.1\|519972_520254_+\|holin	holin	C7BGD7	Burkholderia_phage	1.1e-18	55.2
WP_163164988.1\|520250_521000_+	N-acetylmuramoyl-L-alanine amidase	U5PZX6	Acinetobacter_phage	2.3e-55	65.1

DBSCAN-SWA_2

1766126 : 1776811

Indivirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163166343.1\|1766126_1768760_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	3.6e-39	23.8
WP_004812595.1\|1768962_1769286_+	ferredoxin family protein	NA	NA	NA	NA
WP_163166345.1\|1769425_1770139_+	peptidase M15	NA	NA	NA	NA
WP_004812592.1\|1770271_1770937_+	O-methyltransferase	S5YRC3	Mycobacterium_phage	3.2e-29	38.7
WP_071321085.1\|1771138_1771981_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.8e-32	32.5
WP_171056661.1\|1772168_1772765_-	acyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	3.9e-10	50.8
WP_163166347.1\|1772781_1773381_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	4.1e-23	37.0
WP_004812585.1\|1773488_1774676_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_163166349.1\|1774672_1776811_-	type I secretion system permease/ATPase	F2Y2R6	Organic_Lake_phycodnavirus	8.8e-20	32.0

DBSCAN-SWA_3

1832186 : 1852375

Acinetobacter_phage(71.43%)

capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163166404.1\|1832186_1833182_-	DUF2184 domain-containing protein	M4SQD1	Psychrobacter_phage	8.8e-47	36.1
WP_163166406.1\|1833188_1833659_-	hypothetical protein	NA	NA	NA	NA
WP_163166408.1\|1833673_1834858_-	DUF2213 domain-containing protein	M4SN93	Psychrobacter_phage	1.8e-59	37.8
WP_163166410.1\|1834861_1835206_-	hypothetical protein	NA	NA	NA	NA
WP_163166412.1\|1835269_1835578_-	hypothetical protein	NA	NA	NA	NA
WP_163166414.1\|1835662_1836472_-\|capsid	minor capsid protein	M4T3R2	Psychrobacter_phage	1.6e-51	39.5
WP_163167752.1\|1836446_1837733_-	DUF1073 domain-containing protein	M4SN90	Psychrobacter_phage	2.1e-85	39.2
WP_163166416.1\|1837813_1839340_-\|terminase	phage terminase large subunit	A0A291LBL3	Klebsiella_phage	4.0e-91	41.5
WP_163166418.1\|1839317_1839791_-	DUF2280 domain-containing protein	A0A1B1P9C2	Acinetobacter_phage	9.6e-36	68.5
WP_163166420.1\|1839850_1840492_-	hypothetical protein	A0A2H4JE07	uncultured_Caudovirales_phage	5.3e-114	91.1
WP_163166422.1\|1840451_1840889_-	hypothetical protein	A0A0P0IVP9	Acinetobacter_phage	1.2e-37	57.9
WP_163166424.1\|1840948_1841251_-	hemolysin	NA	NA	NA	NA
WP_163166426.1\|1841450_1841753_-	hemolysin	NA	NA	NA	NA
WP_163166428.1\|1842641_1842929_-	hypothetical protein	NA	NA	NA	NA
WP_163166430.1\|1843139_1843664_-	hypothetical protein	A0A0P0IY98	Acinetobacter_phage	9.9e-58	64.9
WP_163166432.1\|1843660_1844071_-	DUF559 domain-containing protein	A0A0P0I8E8	Acinetobacter_phage	2.0e-37	58.6
WP_163166434.1\|1844067_1844328_-	hypothetical protein	A0A1B1P9H6	Acinetobacter_phage	3.7e-05	36.5
WP_163166436.1\|1844324_1844624_-	hypothetical protein	NA	NA	NA	NA
WP_005266900.1\|1844620_1844818_-	hypothetical protein	A0A0P0IL13	Acinetobacter_phage	7.8e-16	63.9
WP_017397995.1\|1844814_1845039_-	hypothetical protein	A0A0P0I4B7	Acinetobacter_phage	8.3e-14	56.3
WP_163166437.1\|1845035_1845779_-	ATP-binding protein	A0A0D4DBZ2	Acinetobacter_phage	1.4e-62	51.8
WP_163166440.1\|1845775_1846675_-	replication protein	NA	NA	NA	NA
WP_163166442.1\|1846724_1847000_-	hypothetical protein	A0A1B1P9I3	Acinetobacter_phage	5.6e-36	88.6
WP_163166444.1\|1847008_1847194_-	hypothetical protein	J7HXD2	Acinetobacter_phage	1.2e-10	61.4
WP_163166446.1\|1847297_1847945_+	helix-turn-helix domain-containing protein	A0A0P0IYD9	Acinetobacter_phage	1.2e-31	41.4
WP_163166448.1\|1848011_1848215_-	hypothetical protein	NA	NA	NA	NA
WP_163166450.1\|1848476_1848683_+	hypothetical protein	NA	NA	NA	NA
WP_163166452.1\|1849005_1849428_+	hypothetical protein	A0A0N7IRF7	Acinetobacter_phage	2.6e-32	55.7
WP_163166454.1\|1849430_1850549_+	AAA family ATPase	A0A0P0HSM9	Acinetobacter_phage	8.6e-168	79.2
WP_163166456.1\|1850545_1851730_+	hypothetical protein	A0A0D4DBR8	Acinetobacter_phage	1.2e-29	30.6
WP_163166458.1\|1851860_1852103_+	hypothetical protein	NA	NA	NA	NA
WP_163166460.1\|1852102_1852375_+	hypothetical protein	A0A0P0J0F2	Acinetobacter_phage	2.8e-24	61.2

DBSCAN-SWA_4

2041379 : 2048190

Acinetobacter_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171521743.1\|2041379_2041955_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.2e-104	94.8
WP_163167768.1\|2041961_2043008_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.3e-154	81.4
WP_163166655.1\|2043028_2043835_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.4e-122	82.8
WP_005221425.1\|2044185_2044869_+	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	3.3e-85	73.8
WP_171249847.1\|2044962_2045511_+	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	8.1e-95	96.7
WP_111810417.1\|2045606_2045966_+	DUF861 domain-containing protein	NA	NA	NA	NA
WP_163166657.1\|2046221_2046785_+	DUF4385 family protein	A0A1D8KJK0	Synechococcus_phage	2.0e-32	50.9
WP_163166659.1\|2046786_2048190_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.7e-16	35.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP044490

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP044490_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044490_1

2737-2846

Orphan

Consensus_repeat	Method
TATTTGTACCCTTTATCATGCTATTTGTACCCTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044490_1

>merge|NZ_CP044490|1|2737-2846|CRISPRCasFinder
TATTTGTACCCTTTATCATGCTATTTGTACCCTTTAATCATGCTATTTGTACCCTTTTAAACGATAAAATCATGCTATTTGTACCCTTTATCATGCTATTTGTACCCTTT

>NZ_CP044490|1|1|2737-2846|CRISPRCasFinder
TATTTGTACCCTTTATCATGCTATTTGTACCCTTT	AATCATGCTATTTGTACCCTTTTAAACGATAAAATCATGC
TATTTGTACCCTTTATCATGCTATTTGTACCCTTT

Protein	Function_ID	Function_description	E-value
NZ_CP044490.1\|WP_163167918.1\|3329_4982_-\|MobA/MobL-family-protein	gnl\|CDD\|367473	pfam03389, MobA_MobL, MobA/MobL family. This family includes of the MobA protein from the E. coli plasmid RSF1010, and the MobL protein from the Thiobacillus ferrooxidans plasmid PTF1. These sequences are mobilisation proteins, which are essential for specific plasmid transfer.	5.53746e-74
NZ_CP044490.1\|WP_000557944.1\|5806_6070_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	2.30515e-23
NZ_CP044490.1\|WP_001031297.1\|1695_2646_-\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	6.87541e-29
NZ_CP044490.1\|WP_000184943.1\|5556_5820_-\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	5.80128e-46
NZ_CP044490.1\|WP_000857160.1\|1411_1699_-\|hypothetical-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.00270765

>NZ_CP044490.1|WP_001031297.1|1695_2646_-|replication-initiation-protein
MNKENSYDKSYPVTTMAIQNKVTECFKSMSVDEKRILIMASPIARNVDASEQDQILISAQQFADDCGIKVNSAYKQIENASKKLVDRSFSYVNDRGKKVYSNWVIDATYEDAGISLRFTSIVLVMLKILDKYNPYTRYKKDVVLKLKKDYSIDFYHLAKKNQAKNGFELTLDEMFTEFGLPESYRDLRNLKRRVLKSSLDEINEFTDVTVDYSPVKKGRSVVGFKFTVKEKSKPKLIAPERDPKTIDMFCNLSDAQINKYSAILSKLSELSDLSNFQDYPSFALWISGILRDPKSVREETAKRIFKALHSKTDFKP
>NZ_CP044490.1|WP_000857160.1|1411_1699_-|hypothetical-protein
MKTRAELDAMSHQELKDYEQILLALWTPRMAIESDIERLSTNRNELLEIFNQLKNPDAPENERLKNSILSLKYKIEDLEDKLDDLIQDNRLNRAD
>NZ_CP044490.1|WP_163167918.1|3329_4982_-|MobA/MobL-family-protein
MAIYHFSVKTISRGNGRSAVACAAYRSGEKLVCNFYGKEQDYTKKTGVEFTEIYAPENTNTELLNRQTLWNKVEKAERRKDALLAREFEIAFPGELNAEQRKNMLNELCQNLVKKYGVIVDAAIHAPHTDSGSDERNYHAHIMFTTRSINEHGDFSAKKYRDFSRDNGTETVSHWRESFAELCNHHLKQNGFDERVDHRSYEDQESDLEATQHEGPQATYLRRRGIFTEISLKNDEIKLRNLKIKKVIALDENIKVSEDLVQKVRSELQFQYSQAEYSEKTSQKLYEFQNEELSKLTTKLDTMSSAISELRKKEPLFFKTKWINQINDLIDQHNTQLDIQKHISGLSEIEKKERYSDHLNKWTEENQLLQPKKSFAKFDEPNITVKQRKLNDQISNIDHQISEISRRETEYQEYVRDQRLEIINSYIFEEDNYGNKYFSPQNGEKQKRLYAEEMEDLKIQELHAAFTKKIETEAQQEFSQKRAIQLENDRKDRESREQRYAQEREQQEQRYAQEREQQEHLAFVRRQEQEKQQRNEPKKPENDNNHDYTP
>NZ_CP044490.1|WP_000110201.1|5192_5495_+|hypothetical-protein
MSVETLEQKIAKQEERLRQLKAQKQAIAAREKKKNSDRQRKDDTRRKILLGAWVLNKLKNDESFKGQLTDFEKFLSTESKTEENRQKDKDLFNGVIWNNT
>NZ_CP044490.1|WP_000184943.1|5556_5820_-|Txe/YoeB-family-addiction-module-toxin
MTNRNVEWTDNAWDEYIYWQTQDKKILKRINTLIKECQRTPFEGTGKPEPLKANLSGFWSRRIDEKHRLVYEVTDERISIIQCRFHY
>NZ_CP044490.1|WP_000557944.1|5806_6070_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MHVFTYTDARNNLKSVLDKVIDDVDVAFITRKEGGHAVVMGQDHYDSLMETLYLLSSPNNASRLNESIAQLRAGKTKHRELIEDDES

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NC_010401	Acinetobacter baumannii AYE plasmid p1ABAYE, complete sequence	464-503	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP042368	Acinetobacter pittii strain C54 plasmid pC54_004, complete sequence	2569-2608	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP032139	Acinetobacter sp. WCHAc010052 plasmid p2_010052, complete sequence	2376-2415	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_KP890934	Acinetobacter baumannii strain BM2686 plasmid pIP1858, complete sequence	465-504	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP032121	Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.6, complete sequence	5001-5040	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP044490	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-7, complete sequence	2772-2811	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP033127	Acinetobacter wuhouensis strain WCHAW010062 plasmid p7_010062, complete sequence	1958-1997	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP032272	Acinetobacter sp. WCHAc010034 plasmid p4_010034, complete sequence	4655-4694	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP042561	Acinetobacter baumannii strain E47 plasmid pE47_005, complete sequence	2442-2481	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP029390	Acinetobacter defluvii strain WCHA30 plasmid p2_010030, complete sequence	2493-2532	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP031712	Acinetobacter wuhouensis strain WCHA60 plasmid p4_010060, complete sequence	4290-4329	1.0
NZ_CP044490_1	1.1\|2772\|40\|NZ_CP044490\|CRISPRCasFinder	2772-2811	40	NZ_CP032103	Acinetobacter lwoffii strain EK30A plasmid pALWEK1.10, complete sequence	6993-7032	1.0

1. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NC_010401 (Acinetobacter baumannii AYE plasmid p1ABAYE, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

2. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP042368 (Acinetobacter pittii strain C54 plasmid pC54_004, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

3. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP032139 (Acinetobacter sp. WCHAc010052 plasmid p2_010052, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

4. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_KP890934 (Acinetobacter baumannii strain BM2686 plasmid pIP1858, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

5. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP032121 (Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.6, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

6. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP044490 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-7, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

7. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP033127 (Acinetobacter wuhouensis strain WCHAW010062 plasmid p7_010062, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

8. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP032272 (Acinetobacter sp. WCHAc010034 plasmid p4_010034, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

9. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP042561 (Acinetobacter baumannii strain E47 plasmid pE47_005, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

10. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP029390 (Acinetobacter defluvii strain WCHA30 plasmid p2_010030, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

11. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP031712 (Acinetobacter wuhouensis strain WCHA60 plasmid p4_010060, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

12. spacer 1.1|2772|40|NZ_CP044490|CRISPRCasFinder matches to NZ_CP032103 (Acinetobacter lwoffii strain EK30A plasmid pALWEK1.10, complete sequence) position: , mismatch: 0, identity: 1.0

aatcatgctatttgtacccttttaaacgataaaatcatgc	CRISPR spacer
aatcatgctatttgtacccttttaaacgataaaatcatgc	Protospacer
****************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP044484

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 40991

Escherichia_phage(36.36%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_127800989.1\|914_2087_+	replication initiation protein	NA	NA	NA	NA
WP_163143546.1\|2707_3640_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	1.4e-59	41.7
WP_159153817.1\|4208_5744_+	phosphorylase	NA	NA	NA	NA
WP_163143569.1\|5763_6711_+	nucleotidyltransferase	NA	NA	NA	NA
WP_151208077.1\|6714_7212_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA
WP_163167816.1\|7208_8105_+	AAA family ATPase	B2YG10	Musca_hytrovirus	2.6e-05	26.6
WP_127798920.1\|8133_8673_+	3'-5' exonuclease	NA	NA	NA	NA
WP_127798922.1\|8713_9229_+	hypothetical protein	NA	NA	NA	NA
WP_159153816.1\|9492_10711_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	4.9e-76	52.2
WP_159153815.1\|10833_11607_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	1.2e-75	56.6
WP_127800962.1\|13598_13919_-	hypothetical protein	NA	NA	NA	NA
WP_127800960.1\|13918_14200_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_163143575.1\|14356_14740_+\|transposase	transposase	NA	NA	NA	NA
WP_004780063.1\|14736_15072_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_127800924.1\|17193_17739_-	DNA-binding protein	NA	NA	NA	NA
WP_104505828.1\|18622_18946_+	transcriptional regulator	NA	NA	NA	NA
WP_104505827.1\|18926_19241_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_104505826.1\|19279_19594_+	hypothetical protein	NA	NA	NA	NA
WP_074163995.1\|20299_20800_-	META domain-containing protein	NA	NA	NA	NA
WP_074163994.1\|20802_21486_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|21723_22428_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004994718.1\|22868_23894_+\|transposase	IS30-like element ISAba125 family transposase	W5R8L2	Staphylococcus_phage	1.2e-51	38.1
WP_004201164.1\|23994_24807_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_004201167.1\|24810_25176_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_004201168.1\|25180_25819_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201169.1\|25829_26861_-	twin-arginine translocation (TAT) pathway signal sequence domain protein	NA	NA	NA	NA
WP_004993315.1\|27333_27981_-	recombinase family protein	A0A0A8WIK3	Clostridium_phage	2.6e-15	31.4
WP_005108698.1\|28472_28904_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_005108699.1\|28910_29339_-	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_015060273.1\|29575_30910_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_163167818.1\|31056_31371_-	hypothetical protein	NA	NA	NA	NA
WP_163167820.1\|31367_31787_-	hypothetical protein	NA	NA	NA	NA
WP_000438825.1\|32092_32380_+	BrnT family toxin	NA	NA	NA	NA
WP_004728120.1\|32366_32681_+	BrnA antitoxin family protein	NA	NA	NA	NA
WP_000172759.1\|32769_33300_-	hypothetical protein	NA	NA	NA	NA
WP_000286964.1\|33448_33751_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	9.5e-21	49.0
WP_000985609.1\|33751_34033_+	putative addiction module antidote protein	A4JWV1	Burkholderia_virus	5.7e-12	43.3
WP_001180106.1\|34112_34532_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_015060273.1\|34694_36029_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_000897307.1\|36157_36478_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000369781.1\|36470_36743_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_085940648.1\|36832_37923_-\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_001043260.1\|38012_38828_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_000251875.1\|38914_39217_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_001445143.1\|39110_39362_-	hypothetical protein	NA	NA	NA	NA
WP_001067784.1\|40286_40991_+\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8

DBSCAN-SWA_2

44065 : 47587

Clostridioides_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163167824.1\|44065_47587_-	BREX-1 system adenine-specific DNA-methyltransferase PglX	A0A2R2ZGH5	Clostridioides_phage	2.8e-07	20.3

DBSCAN-SWA_3

56622 : 63640

Pandoravirus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043260.1\|56622_57438_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_001082319.1\|57498_58302_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_000480968.1\|58301_59138_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_058199817.1\|59542_60322_+	APH(3')-VI family aminoglycoside O-phosphotransferase	E4ZFP6	Streptococcus_phage	3.1e-31	35.5
WP_000480968.1\|60633_61470_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001120891.1\|61441_61981_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000214122.1\|62425_63640_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7

DBSCAN-SWA_4

72093 : 73464

Leptospira_phage(50.0%)

transposase,integrase

attL 61576:61635|attR 78597:79120

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
61576:61635	attL	NA	NA	NA	NA
WP_152342664.1\|72093_72621_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.1e-27	39.8
WP_001067855.1\|72759_73464_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
78597:79120	attR	NA	NA	NA	NA

DBSCAN-SWA_5

79194 : 80359

Acinetobacter_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_119285041.1\|79194_80359_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.0e-139	85.2

DBSCAN-SWA_6

87088 : 88288

Erwinia_phage(100.0%)

integrase

attL 83552:83566|attR 91436:91450

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
83552:83566	attL	NA	NA	NA	NA
WP_005245164.1\|87088_88288_-\|integrase	tyrosine-type recombinase/integrase	E5AGD0	Erwinia_phage	2.6e-37	29.3
WP_005245164.1\|87088_88288_-\|integrase	tyrosine-type recombinase/integrase	E5AGD0	Erwinia_phage	2.6e-37	29.3
91436:91450	attR	NA	NA	NA	NA

DBSCAN-SWA_7

103626 : 105288

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_127801007.1\|103626_105288_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.6e-170	54.9

DBSCAN-SWA_8

108505 : 109417

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_127800993.1\|108505_109417_-	ParB/RepB/Spo0J family partition protein	S5VSZ7	Leptospira_phage	1.4e-14	35.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP044485

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP044483

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP044490

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP044484

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection