CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048875	Streptomyces albus strain CAS922 chromosome, complete genome	18 crisprs	csa3,DEDDh,WYL,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas4,cas2,cas3,DinG,cas6,casR	1	45	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048875_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_1

694321-694414

Orphan

Consensus_repeat	Method
CTGAGGAGATGACAGGGGCGGCGTCCCGCACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048875_1

>merge|NZ_CP048875|1|694321-694414|CRISPRCasFinder
CTGAGGAGATGACAGGGGCGGCGTCCCGCACGCCGCCCGCACACCGGGACCCGAACCGGGTACTGAGGAGATGACAGGAGCGGCGTCCCGCACG

>NZ_CP048875|1|1|694321-694414|CRISPRCasFinder
CTGAGGAGATGACAGGGGCGGCGTCCCGCACG	CCGCCCGCACACCGGGACCCGAACCGGGTA
CTGAGGAGATGACAGGAGCGGCGTCCCGCACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_016467092.1\|697657_698281_-\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238495
NZ_CP048875.1\|WP_033228840.1\|689729_690941_+\|salicylate-hydroxylase	unknown	unknown	gnl\|CDD\|181262
NZ_CP048875.1\|WP_016467082.1\|683350_683842_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP048875.1\|WP_016467087.1\|688158_689727_+\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|223442
NZ_CP048875.1\|WP_164439222.1\|684838_686431_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP048875.1\|WP_031029229.1\|707157_708276_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP048875.1\|WP_016467081.1\|681583_683146_+\|4-hydroxyphenylacetate-3-monooxygenase,-oxygenase-component	unknown	unknown	gnl\|CDD\|225243
NZ_CP048875.1\|WP_031029219.1\|699153_700305_-\|phospho-2-dehydro-3-deoxyheptonate-aldolase	unknown	unknown	gnl\|CDD\|366662
NZ_CP048875.1\|WP_158691572.1\|701315_703214_+\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379252
NZ_CP048875.1\|WP_164439223.1\|695771_697661_-\|phenazine-specific-anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|223225
NZ_CP048875.1\|WP_037773471.1\|686459_687452_-\|NADPH:quinone-reductase	unknown	unknown	gnl\|CDD\|176215
NZ_CP048875.1\|WP_031175129.1\|706205_707165_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376057
NZ_CP048875.1\|WP_016467086.1\|687599_688142_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176854
NZ_CP048875.1\|WP_031027772.1\|684022_684853_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377216
NZ_CP048875.1\|WP_016467096.1\|703226_704327_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP048875.1\|WP_016467093.1\|698308_699079_-\|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase	unknown	unknown	gnl\|CDD\|275120
NZ_CP048875.1\|WP_164439224.1\|708415_709459_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|275336
NZ_CP048875.1\|WP_016467080.1\|680886_681546_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224103
NZ_CP048875.1\|WP_016467089.1\|690937_692917_+\|FAD/NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|379196
NZ_CP048875.1\|WP_137034388.1\|704392_706015_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_016467092.1\|697657_698281_-\|isochorismatase-family-protein	gnl\|CDD\|238495	cd01013, isochorismatase, Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems. Isochorismatase is part of the phenazine biosynthesis pathway. Phenazines are antimicrobial compounds that provide the competitive advantage for certain bacteria.	1.06103e-108
NZ_CP048875.1\|WP_033228840.1\|689729_690941_+\|salicylate-hydroxylase	gnl\|CDD\|181262	PRK08163, PRK08163, 3-hydroxybenzoate 6-monooxygenase.	5.38801e-145
NZ_CP048875.1\|WP_016467082.1\|683350_683842_+\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	5.5928e-11
NZ_CP048875.1\|WP_016467087.1\|688158_689727_+\|acyl-CoA-synthetase	gnl\|CDD\|223442	COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism].	6.98451e-46
NZ_CP048875.1\|WP_164439222.1\|684838_686431_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	6.20631e-69
NZ_CP048875.1\|WP_031029229.1\|707157_708276_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	3.43031e-51
NZ_CP048875.1\|WP_016467081.1\|681583_683146_+\|4-hydroxyphenylacetate-3-monooxygenase,-oxygenase-component	gnl\|CDD\|225243	COG2368, COG2368, Aromatic ring hydroxylase [Secondary metabolites biosynthesis, transport, and catabolism].	5.59769e-140
NZ_CP048875.1\|WP_031029219.1\|699153_700305_-\|phospho-2-dehydro-3-deoxyheptonate-aldolase	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	2.27472e-155
NZ_CP048875.1\|WP_158691572.1\|701315_703214_+\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.14148e-38
NZ_CP048875.1\|WP_164439223.1\|695771_697661_-\|phenazine-specific-anthranilate-synthase-component-I	gnl\|CDD\|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	1.92705e-56
NZ_CP048875.1\|WP_037773471.1\|686459_687452_-\|NADPH:quinone-reductase	gnl\|CDD\|176215	cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	1.72946e-102
NZ_CP048875.1\|WP_031175129.1\|706205_707165_+\|hypothetical-protein	gnl\|CDD\|376057	pfam18631, Cucumopine_C, Cucumopine synthase C-terminal helical bundle domain. McbB from Marinactinospora thermotolerans is an enzyme that catalyzes the Pictet-Spengler (PS) reaction of L-tryptophan and oxaloacetaldehyde to produce the betaC scaffold of marinacarbolines. This is the C-terminal domain composed of 5 bundled alpha helices. It is weakly similar to the signal transduction histidine-protein kinase BarA from E. coli and the DNA endonuclease I-MsoI from Monomastix sp.	1.32555e-63
NZ_CP048875.1\|WP_016467086.1\|687599_688142_+\|SRPBCC-family-protein	gnl\|CDD\|176854	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	1.29951e-10
NZ_CP048875.1\|WP_031027772.1\|684022_684853_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377216	pfam04072, LCM, Leucine carboxyl methyltransferase. Family of leucine carboxyl methyltransferases EC:2.1.1.-. This family may need divides a the full alignment contains a significantly shorter mouse sequence.	5.62324e-57
NZ_CP048875.1\|WP_016467096.1\|703226_704327_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	2.95425e-38
NZ_CP048875.1\|WP_016467093.1\|698308_699079_-\|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase	gnl\|CDD\|275120	TIGR04316, 23-dihydro-23-dihydroxybenzoate_dehydrogenase, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase. Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase.	5.81786e-133
NZ_CP048875.1\|WP_164439224.1\|708415_709459_+\|SAM-dependent-methyltransferase	gnl\|CDD\|275336	TIGR04543, 2-ketoarginine_methyltransferase, 2-ketoarginine methyltransferase. This SAM-dependent C-methyltransferase performs the middle step of a three step conversion from arginine to beta-methylarginine. It performs a C-methylation at position 3 of 5-guanidino-2-oxopentanoic acid (keto-arginine). An aminotransferase converts arginine to 5-guanidino-2-oxopentanoic acid, and later converts 5-guanidino-3-methyl-2-oxopentanoic acid to beta-methylarginine.	1.70097e-13
NZ_CP048875.1\|WP_016467080.1\|680886_681546_+\|hypothetical-protein	gnl\|CDD\|224103	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism].	2.85629e-27
NZ_CP048875.1\|WP_016467089.1\|690937_692917_+\|FAD/NAD(P)-binding-protein	gnl\|CDD\|379196	pfam13454, NAD_binding_9, FAD-NAD(P)-binding.	4.29627e-39
NZ_CP048875.1\|WP_137034388.1\|704392_706015_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.50892e-81

>NZ_CP048875.1|WP_016467089.1|690937_692917_+|FAD/NAD(P)-binding-protein
MRDRHLEVCIVGAGPRGLSVLERLCANERYERRCATLTVHVVDPAAPGAGAVWRTGQSRLLLANTVASQITVHTDESVHMAGPVEPGPGLHDWARSVAVLGSPEDYGAEILAEARELGPDSYPTRALYGHYLRDAFRRVVANAPGHVRIRVHRSRAVAMADTHGLPDGVQGVRLENRTRLDSLDAVVLAQGHLPARLTPREERTASLARIHHLTYLPCGNPADADLSVVEPGRPVLLRGLGLNFFDYMALLSVGRGGVFERHDGRLVYRPSGQEPVLHAFSRRGVPHHARGENEKGAFGRYRSRLLTREHIAALRRRSRAGGHVRFGADLWPLVSREVEAVYYGTLLASRGRHQDKDAFTERYLARPDAGGRARLLDEAGIAPADRWDWERIARPCAGETFRTRDDFRAWLLAYLARDVREARAGNVSGPLKAALDVLRDLRNEIRLVVDHGGLEGRSHRDELDGWYTPLNAFLSIGPPASRVEEMIALIEAGVLVVTGPGTQVRIDTTAPAFVANSPLAPGPAVRSAVLIEARLPEPDIRRTADPLLLHLLRTEQCTTHRVPDAEGGSHETGGLAVTERPYRLLDAHGHAHPRRFAYGVPTEAVHWVTAAGIRPGVDSVTLGDADAIARAALAVPPPVHEADAFGSARGTTDLTGVPI
>NZ_CP048875.1|WP_033228840.1|689729_690941_+|salicylate-hydroxylase
MGKVIVAGGGIGGLAAALSVARQGHEAVVLERSEHFAELGAGLQLAPNGMHALERLGLGAEVRALAVHVEQLRFMDGVTGEYVTHVPLTGRYRERFGNPYVVVHRGELHGLLLAACRDTSGIELCTSRSVAGYTHDGRRVTAVMEGGERVEGDALIGADGIHSAVRRQLVGDGEPRISGITVHRAIIPMEQVPEHLRWNAVTWWAGPGCHFVHYAIAGGKYLNLAASFHDGATRALAGVPVDRRVVDGLFTMLDETPRRLLALGEQWKSWVLIDRAPVDCWTDGPVTLLGDAAHPMLHYAAQGACQALEDAVVLGELLDGGRAEFARWFNRYNQQRRSRTAAVQKISRDSIALWHPAGAAAEARNAALSGMSTDELHDHLAWMHGERDFTTVPPALPHRGAAR
>NZ_CP048875.1|WP_016467087.1|688158_689727_+|acyl-CoA-synthetase
MLLQRVGNRGIRLGTLFDRAAARHPGNVVVLDHELDLAPRLGSRATVTEIADLVDDFASRLWAAGVRPADRVVVYKTNSFDITLLACVAARIGAVPVLLSPTLDGATVSELVRRVDRPYLVTDQAKLESELPAAVFGHARRVLLAAGDHPEAQRLADLAGAPRVAPVRMSAHHPTLITHTSGTTGIPKLAVHTGWTLQARYRPQAAATALVRKRRPVAVHVSFVHSRLFTALAIAMLRGFPLVMLADDDPEHVAGIFARVRPGVVEAHPNTFMRWERLIDDPRRPLADVKYFSSTFDAIHPRTVHRMLRASRHRAPVFAQLYGQSEAGPVVGRIFTRRRGKDADGRCVGHAFPGMTGVRVVSRDGQPVSESSPGYIEVRTDGRVLTYLGEPERYAKQEHDQWWRMGDVGYRSRWGCLHLLDREVDVIPGFGSTLAAEDALFSRLDELVEVIIVPDPDGKPVPVVCTRDNAPLDMAAWSRATASLPAMAEPVQWRQTDLPQTATTKIKRLELAKALGSRNRGL
>NZ_CP048875.1|WP_016467086.1|687599_688142_+|SRPBCC-family-protein
MSQSNAPAKPLFDLRARIRVRAAPAAVYAVVSDLPRSAEWSPECTGGAWVSGRPATVGAVFRGDNVRAEDVVAWAPVVRGTWQTESQVVAAEPGRVFRWAVRDRSGKVQDSVWSYEIEPDGDGCVLVHGFRMAGATEGIRGITAEMDDAGKEKFFTDWTAKLAGDLETTLLRIKAVVEKA
>NZ_CP048875.1|WP_037773471.1|686459_687452_-|NADPH:quinone-reductase
MLAAFVNRLGTPDEIRCGELPAPRPGRDDVLVDVTATTVNPVDTFVRSGDYPTRVSFPFVIGRDLVGVVTGTGAGVHGFAPGDVVWCNSLGHDGRQGAAAEQAVVPADRLYHLPEGVEPAAAVAVVHPAATAWLALFRHGCVRPGETVFVAGAAGNVGSALVVLAADAGARVIATAAGRDLEYCLGLGAAEAHDYADPSLPARLGSVCPRGIDVYLDTSGRNDLGTAVGLLAPGGRIVLLAGAHTRPVLPAGELYMKDGSVRGFVISRATTGELAEAADTVNRLLATGRLRARTTETLPLCAAAEAHRRMEKGELHGRRLILRIAGATAP
>NZ_CP048875.1|WP_164439222.1|684838_686431_-|MFS-transporter
MERRWWTLLVVCAAMFMLLLDVNVVVVALPDIQEELDAGLGSLQWMTDAYALTLAALLLTAGFLADKYGRRRLFALGLVLFTGGSLLCGLAQDARALIACRAVQGIGGATLSATSLALLAGSFRGRQRGVAFGVWGAVAGVATGLGPVLGGLLTDSVGWRGIFLVNVPVGAAALVITLRRVEESRAPHTGRIDWLGVVTLTAGLFSLVHGLIAAGEAGWDEEGVIVRLALAAVFLTAFALAERRAAEPMFSLSLLRIPTFLGGSVAAFAMNASLYAVFMYLVLYLQNGLGDGPLVTGLRLLVGSAFTFVAAFVAGRLSSRVPVRWLIGPGLLLVGLGLLLMRGLTAGSGWTHLIAGLIVSGTGAGLVNPPLASTAVGVVPPHRSGMASGVNQTFRQIGLAVGVACYGTVFSATLHATLQRRLAAVPGQGGRAGELAEAVHRGVADRVTAQAPPAVRDAQAEAVRAGFAEALNAVLLTGGVLALVGGVLAGVLIRSRDSAAHRQPSAAQGETAGPEETAERRPGLEASGGR
>NZ_CP048875.1|WP_031027772.1|684022_684853_+|class-I-SAM-dependent-methyltransferase
MSAQQSITPEKTAVRVALWRAMHLDVDEPPHVLEDEVGLRLAAPGDGWRRRPDMGRKATSGFRAGVVARARFVEDLVAERFDAGVRQYVILGAGLDTFAQRRTELASRLRVFEIDQPGPQEWKRRRLTELGYGVPEWLRMVPVDFEADDDWWQRLTDAGFDPSRPAVLASTGVSMYLTKDAVADTLAKAAKTAPGSTFAMTFLLPPHLVGPGGEAQRRRIRFRSYFTAEEMLRLARECGFPEARHISTADITRRYFAERPDGLRPEVGESFLLATT
>NZ_CP048875.1|WP_016467082.1|683350_683842_+|DoxX-family-protein
MADTGRLIIRGVVGGLAIGRGGRKLFGWFGGPGRDRTARTFESFGYRHSRVMATVAGITDLSTGVGLLAGLATPLAASAFIGEMVNAAAVHRREGPWAEDGGYEYPLVLATAAACLAWDGPGALSADRALGRERTGPAWGLGAMALGAAGGVAVLRLFRDEPE
>NZ_CP048875.1|WP_016467081.1|681583_683146_+|4-hydroxyphenylacetate-3-monooxygenase,-oxygenase-component
MPARTGKQYLDNLASLDPEIYLNGRRIRHVTEEPVFAGPLRTVAEQYDLQLDPRYVDVCTYESPTTGERLSRSFQPCRSKEDLVAKRRHFKLRADHTFGMMGRSPDFMNAFVLGWSNNAHIFGELDARFGENARRYYEHVRDHDLFLTHVLINPAIDRSKTSSQQEDPFLHLGKVRETDEGIVVRGAKMLSTMAPFAEELVVVPFGGIAPGDDDYAVVFAVPIDTPGLKFICREPVAPAGRTEFDHPLSSRFEEMDCIAVFDDVLVPWDRVVVDGRPGSRDLVNRVLGNDPSVLVVNACRSLASVELLCGVATKIADATGIDNFLHVQEKLGDLLARLDTLRTLFHGAEALAAPLPDGTWVPYMPGLMAFHMQTAPTHRRMVEVIQILAAGNFFYAPSGGDFANEELRPFIDRFVRGRPGVSAEERVRLFKLAWDVAGDGFGQRLMQYVHYYSGDPVRLTAALYLSADKTEIHRTVERALAGSERSLDIPVSPERLEMAPPPPPTKPLTGMYPAKSQPSS
>NZ_CP048875.1|WP_016467080.1|680886_681546_+|hypothetical-protein
MSLFRLDTSILGTRSSTIALADLVEREWRATAPDPSVVRRHLGEDPLPATAWAAAVAAQFVPPARRAPEEREALSLAAALVDELVAAEALLLAAPLYNFGVSQHLKTWVDLLLTDPRMAAGTESPLAGRPAVLVTARGGAYGPGTPREGWDHAIGWMRRIFGDVWKLELTVVERELTLVGIDPALDRFKELAERVRVTTEEQARAAGRRLAAREGAFLA
>NZ_CP048875.1|WP_164439223.1|695771_697661_-|phenazine-specific-anthranilate-synthase-component-I
MTGHTNPAGPHPLARILAPRPPAFALIHRPERTGGEVVDVLVGDVSAHDTLARIPLPEDTGGPAGQDVLVLVPFRQLAERGFACNDDGEPLLAMTVTEQAAVPRHEALAMLPDLPTRVTGQHFDVTDDEYAELVRKVVTEEIGRGEGGNFVLKRSYVARITDYSPRRGLSLFRRLLQRETGAYWTFIVHTGERTFVGATPERHISVHGGTAVMNPISGTYRYPPSGPDLAQVLAFLDDRKETDELYMVLDEELKMMAGICDGGGHVVGPCLKEMARLAHTEYFIEGRTGRDPREILWQTMFAPTVTGSPLENACRAISRHEPLGRGYYSGVAALIGRDGDGGRTLDSAVMIRTADIERSGRTRIGVGATLVRHSDPASEVAETRAKAAGLLAALQAEEPARLGDHPRVRAALARRNTGISGFWLTRAGRRSTPWPTMSGLRVLVVDAEDTFTAMLYHQLRALGAEVTVRRFDEPYDAGSHDLVVMGPGPGDPLDVAHPKIARLYEATDRLLAQRRPFLAVCLSHQVLSARLGLEVVRKRVPNQGMQRDIDLFGVPERVGFYNSFTARSEDDKIECPGLGMVEISRDPATGEVHALRGPRFSSVQFHAESVLTVDGVRIIADRLGEALGR
>NZ_CP048875.1|WP_016467092.1|697657_698281_-|isochorismatase-family-protein
MAGIPPIEPYLLPTAGDLPENVARWAVDPDRAVLLVHDMQRYFLRPFPDTVRGPLVRNAAQLTEHCRGLGIPVAYTAQPGGMSEQDRGLLKDFWGPGMKVDPADRTVVDELRPAADDWTFTKWRYSAFFRSGLLAELERHGRDQLLVCGVYGHVGVLTTAVEAFSNDIETFLVADAIADFSADHHRMALAYAAQRCAVVTTVKELDA
>NZ_CP048875.1|WP_016467093.1|698308_699079_-|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase
MEDKVALVTGAAGGIGAAVARALARRGARVAAVDLHTGRLTEEVGKLTADGLAVEAFPADVTRAAAVEELVEGVETRLGPVDLLVNAAGVLRLGPVHRLGDEDWAATFAVNTTGVFLVSRAVAGRMMPRSRGAIVTVASNAAGTPRTEMAAYAASKAAATMFTKCLALEVAGHGIRCNVVAPGSTDTAMLRSMWQDESGARATIEGRPEAYKLGIPLGKLARPADIADAVVFLLSDRAGHITMHELTVDGGATLGA
>NZ_CP048875.1|WP_031029219.1|699153_700305_-|phospho-2-dehydro-3-deoxyheptonate-aldolase
MPPGPAGQQPPWPDAATVRRVRRRLAALPALLDAEDVLALRTRLAEVAAGGAQVLQAGDCAEDPAECAPGDVVRKAGLLELLAGRMESITGKPVLRVGRLAGQFAKPRSLAVERVGDLELPAYRGHMVNEFEPDAERRRPDPRRLLCGYRLSGTVMRSLGRAGGGTHPHTGARVWTSHEALLLDYEVPMVRRAGTGRAWLSSTHWPWIGERTRQPDGAHVALLAGVVNPVACKVGPTTTTGELLALCARLDPRREAGRLTLIARMGAGEGGGRLAALVAAVRAEGHPVIWLCDPMHGNTFKTPDGFKTRLVPDIVREVRHFRHAVAAGGGVAGGLHLETTPDDVTECVRTQADIPRVGDKYTSLCDPRLSPDQALTVVSAWRG
>NZ_CP048875.1|WP_158691572.1|701315_703214_+|ParB-N-terminal-domain-containing-protein
MQTCTIPIRILQHGENLRTHGEDREYVTTLAQSPVALPPIFVHRGTMRILDGMHRLKAAQLRGDRSIEVVFFDGDEEDAFVAAVYSNARHGMPLSYDDRAAAATRILHSRPHWPDRTIATVTGLDPRTVRALRSRSGVPAPQPTNLVPLERPARTAAPGSETPAGGAPDPWPSAPVHQVAAEFELEPRTVVDVLSSLRRSRRAAPGQASGEQTESPAPVLHGPLAVPYAVAERTVRPRDLGPAEAMELVLDRVCDELFATFTRRDQRLRARQYLRGLLETPGRKTIRNIAAFVDEPGVDQRLHHFISDSTWDWEPVRTALTRYVARTMEPEAWVIRPVMIPKAGQQAVAVSRRFCPTRGKAVHGQQAVGVLAMSETASTPVSWRLQVPKEWVEDPHRRARAALPDDIGAESLGECTAQAFLHVLARTGGPARPAVLDGRDMEPAQLLWPLRAAEAPLLVRIPATLPLRIDDPALAGNRAPGPLTARRIVEAARFRRRPVTCPDPGDARGHMVTTVDVRWPAGTGAPGQGADTPLRLIAVSPLGENVCEELWLTTLTTMPAATLLKLARLVRRVDRDLDAVSQHVGIWDFSGRSFPGWHRHVTLASAAHLVRLLARTDYRADRLWHCDTGNSH
>NZ_CP048875.1|WP_016467096.1|703226_704327_+|FAD-binding-oxidoreductase
MPGRKNTTEMLIVGGGVTALSIAYHCARAGVTVVLVDPDGETGAGAPQAPRPVRAYQPGKVHNSQLTVRSLADYRSFAPAGGADLVLSDVGWLVLPTGRGRSAALEQEVAAQREAGVELQLLTAAGACVRNPWLDPAGVESALWCPQSYLLDVDKVVRGYAAGAREAGARRLSGKTVTGLDPRSGQLAVADGTFEADVIVLAAGAASGALAEAAGLDLPLWAQTAELFRTDPVVTGEEIEAPFTVHPESGLKTLGTGRSFLVGLERISRQEGMREVWFQETVAEVAKRYPKLKDAGLRSMWTGSVDVTPSRTALIGQAHERVFVAAGYTGQELGQAPATGRIVRDLYLGRSPGLDLAPFSPVPSRP
>NZ_CP048875.1|WP_137034388.1|704392_706015_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MLCGGFFMTLLDAGIVNVAVPSLQSDLDARFDQVLWVVNGYLLALAVPLIAAARLGDRFGVRRLYVTGLVVFTVASALCGAATDVHQLIAARVLQGLGAALLTPQTFTFITVLFPPRERGTAFGVWGMVAGLSTVAGPLLGGVLVDAFGWRWIFLVNLPVGALSAVAALALAPRHRPGGTHRIDLPGLVLICLAMLAVSFGLLEGERYRWGTVAGPVTIPLLLALGVVFLAAFVVLQRGVGRAPRRARHPLVPLRLFADRNFALANAVMLCFGVAMAGLMLPLTLYLQAVRGLSPGEAGVVLAVASFASGVAAPFVDRIGERVGRKALLVLGLACYAAGLTVVAGRTGAGAGPGQFVPALVAAGVGIACVFVLMAKLAVGDLEPALTGAGSGVFNTTRQLGAVVGSAAVGALLQNRLGTALPRLAAQRADGLPHEARDALTGHFGRLTALDVHSGRAVTDALPSGLPPEVADKAGQVAAEVFRQGLTEALRETAVLPLAVSLAAVVCASALRPSRPETAAPEYVRSGTGIPVRAQRKRRD
>NZ_CP048875.1|WP_031175129.1|706205_707165_+|hypothetical-protein
MRQIEIAWQSIGAKVRITLDEGRNAELVEPLWAALPYQTLQGHALVAGDCIYHVPPAHDLLHAVPDHRVDRKIQPNGTVFCSSVQHLTIKYGDLTEPMPTSPIGSVVPEDVDALPKIGQMVWDSVHGNGAPIIAQVRRVDGEAGHGVRRMPAESASARDLIERIAAETERVLIEPTDELVAAHEGRFDQGAGTKNSVLTTLVCINGETRPLGYVSHTGLVRAARLTDVPLSALVEMAKILLVKPTEFLGYCGLNTLWDLTQDMVALLAETTSREDFIALMSHMATYTNALGAWNLQLFPWELGGDTWTFRPTITRSAHA
>NZ_CP048875.1|WP_031029229.1|707157_708276_+|FAD-binding-oxidoreductase
MPDRKNQTELLIIGGGVIGVSIAYHCAKAGIDVVLLEKEQFGTATTSQTARAFRTYFPKKVHDSELAALSLAEFRSFAEKMDTDLALAELGLLTVLTSPEQAAEIEALLPAHREVGVNLELLTADQACEYNPWLDPDTIEAAVWSPDSYRLKPEALVKGYADAAEKLGARLLSGTTVTGLDARTGEVTTTRGDFTADAVVIAAGPWSGEVAKLTGMELPVWGQFAELLHTDPISESDTDTPFTFHPVSGLKTMGMGKSFLVGLERISKQKGMRDIWFKAAVDELPKWYPKLENVELHSAWTGTLDVTPTKSALIGRGEGEHERILFAAGFTGHGLAHAPITGRIIRDLYRGDRPGVDLSPFSVATNLAAKPA
>NZ_CP048875.1|WP_164439224.1|708415_709459_+|SAM-dependent-methyltransferase
MSPLNTLPSEWQGQAPTPLNPDTAFNGYICANVLHGLERLGVFELLRDEKYLDMDRFCETNGLDSAVFRALVGAAESFGYLDVRGAQVRATSVGEDVARYLGFFTWGVGGYHDIFASAAPVARGERRFGVDLHRDEGMVALGSAQADTALMRHILDEEIAGIDFRTLVDLGAGVSERVSRLVKARPGTRGIGIDISRPATELARDTVAGYGLAGTVEPVCADVLDILFNGQEIDGGDAADVVMSFMFLHDLLTAPERREEVVPRLRKAFPRAHTFLLADTTIRPRNEDGDGRLPVFSSGFELAHALMGVPLHTREEYEELFERGGMKLRRSVPFGAPHTYLFVLEAS

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Crispr_ID: NZ_CP048875_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_2

1138872-1138973

Orphan

Consensus_repeat	Method
GACGCAGCGGGGCCGGGTCGTCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048875_2

>merge|NZ_CP048875|2|1138872-1138973|CRISPRCasFinder
GACGCAGCGGGGCCGGGTCGTCCGGGGAGGGGCGCCGGGAGAACGTAGCGGGATCGGGGCACCGGGGACACGTCGGGCGACGCAGCGGGGCCGGATCGTCCG

>NZ_CP048875|2|2|1138872-1138973|CRISPRCasFinder
GACGCAGCGGGGCCGGGTCGTCCG	GGGAGGGGCGCCGGGAGAACGTAGCGGGATCGGGGCACCGGGGACACGTCGGGC
GACGCAGCGGGGCCGGATCGTCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_016467382.1\|1139153_1140071_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|184875
NZ_CP048875.1\|WP_106963657.1\|1143827_1145159_+\|dipeptidase	unknown	unknown	gnl\|CDD\|236127
NZ_CP048875.1\|WP_031175449.1\|1142038_1143508_-\|geranylgeranyl-reductase-family-protein	unknown	unknown	gnl\|CDD\|273936
NZ_CP048875.1\|WP_016467387.1\|1145453_1146491_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239217
NZ_CP048875.1\|WP_033229701.1\|1134930_1135536_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP048875.1\|WP_016467384.1\|1141238_1141703_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|211538
NZ_CP048875.1\|WP_016467377.1\|1134424_1134736_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016467374.1\|1131624_1132485_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP048875.1\|WP_016467390.1\|1148941_1149268_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_031175447.1\|1128887_1131407_-\|membrane-protein	unknown	unknown	gnl\|CDD\|378390
NZ_CP048875.1\|WP_016467380.1\|1136152_1137388_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP048875.1\|WP_016467375.1\|1132652_1133126_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP048875.1\|WP_030408742.1\|1146716_1147286_-\|TIGR03086-family-protein	unknown	unknown	gnl\|CDD\|274424
NZ_CP048875.1\|WP_031026735.1\|1149458_1150403_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP048875.1\|WP_164440277.1\|1147790_1148729_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_CP048875.1\|WP_016467383.1\|1140083_1140863_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379115
NZ_CP048875.1\|WP_016467379.1\|1135628_1136147_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP048875.1\|WP_030408736.1\|1126455_1128921_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|163057
NZ_CP048875.1\|WP_016467376.1\|1133145_1134288_-\|PLP-dependent-cysteine-synthase-family-protein	unknown	unknown	gnl\|CDD\|223110
NZ_CP048875.1\|WP_016467381.1\|1137405_1138734_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340951

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_016467382.1\|1139153_1140071_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	6.22095e-27
NZ_CP048875.1\|WP_106963657.1\|1143827_1145159_+\|dipeptidase	gnl\|CDD\|236127	PRK07907, PRK07907, hypothetical protein; Provisional.	0
NZ_CP048875.1\|WP_031175449.1\|1142038_1143508_-\|geranylgeranyl-reductase-family-protein	gnl\|CDD\|273936	TIGR02032, Uncharacterized_protein_MJ1520, geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	8.78049e-83
NZ_CP048875.1\|WP_016467387.1\|1145453_1146491_-\|NUDIX-hydrolase	gnl\|CDD\|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	2.56631e-18
NZ_CP048875.1\|WP_033229701.1\|1134930_1135536_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	1.27445e-16
NZ_CP048875.1\|WP_016467384.1\|1141238_1141703_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|211538	TIGR00026, Hypothetical_protein_Rv1261c/MT1299/Mb1292c., deazaflavin-dependent oxidoreductase, nitroreductase family. This model represents a family of proteins found in paralogous families in the genera Mycobacterium and Streptomyces. Seven members are in Mycobacterium tuberculosis. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. [Unknown function, Enzymes of unknown specificity].	2.9665e-10
NZ_CP048875.1\|WP_016467374.1\|1131624_1132485_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	2.3789e-76
NZ_CP048875.1\|WP_031026735.1\|1149458_1150403_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	6.11156e-63
NZ_CP048875.1\|WP_031175447.1\|1128887_1131407_-\|membrane-protein	gnl\|CDD\|378390	pfam10101, DUF2339, Predicted membrane protein (DUF2339). This domain, found in various hypothetical bacterial proteins, has no known function.	0.000478716
NZ_CP048875.1\|WP_016467380.1\|1136152_1137388_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	6.96281e-34
NZ_CP048875.1\|WP_016467375.1\|1132652_1133126_+\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	2.53498e-17
NZ_CP048875.1\|WP_030408742.1\|1146716_1147286_-\|TIGR03086-family-protein	gnl\|CDD\|274424	TIGR03086, TIGR03086, TIGR03086 family protein. This family, like pfam07398 and TIGRFAMs family TIGR030834, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized.	1.37075e-33
NZ_CP048875.1\|WP_164440277.1\|1147790_1148729_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	4.61106e-16
NZ_CP048875.1\|WP_016467383.1\|1140083_1140863_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379115	pfam13305, WHG, WHG domain. This presumed domain is around 80 amino acids in length. It is found to the C-terminus of a DNA-binding helix-turn-helix domain. This domain may be involved in binding to an as yet unknown ligand that allows a transcriptional regulation response to that molecule. The domain is named WHG after three conserved residues near the C-terminus of the domain.	1.95477e-13
NZ_CP048875.1\|WP_016467379.1\|1135628_1136147_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.03723e-10
NZ_CP048875.1\|WP_030408736.1\|1126455_1128921_+\|AAA-family-ATPase	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	1.04651e-91
NZ_CP048875.1\|WP_016467376.1\|1133145_1134288_-\|PLP-dependent-cysteine-synthase-family-protein	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	9.84867e-90
NZ_CP048875.1\|WP_016467381.1\|1137405_1138734_+\|MFS-transporter	gnl\|CDD\|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.45133e-82

>NZ_CP048875.1|WP_016467381.1|1137405_1138734_+|MFS-transporter
MPTLNKIRSALAGATGHRCRPSGVPPHPDLRRFRIALTVFFALDGFVFAGWVVRIPAVKAQTGASPSALGLALLGVSAGAVATMMLTGRLCSRWGSQPVVLGCGFLLPLSVALPPLTHSALALGLVLLVFGAAYGGMSVALNSAAVDLIARLRRPVMPGFHAAFSLGGMLGAALGGLVADRLTATRHLVLLAAFGVLVAAVFTRPLLRFPSRTDRPAPQAREGNTSAAPEHEATAGEPSPDPASDGNPADRTRRMSRQVRWPVLVLGLIALCTAYAEGALADWSALHLTDDLGAAPGLAAAGYSVFAGAMTAGRLSGTVLVERLGPARVLTAGGTLGCGGMLLGALAPTVWLALAGFVLTGLGLANVFPIAIGRAGDLGGPGGVAAASTLGYGGVLLGPVAIGFLADWFSLRTALLTVAALAAVAALTAWATRHRALPPTAR
>NZ_CP048875.1|WP_016467380.1|1136152_1137388_-|ROK-family-protein
MTQTRTTRLERGRSALGPALELVHTGQAPTRAVLTAELGVTRATAGAVAGELEALGLITVDAHPTAPVGSQGRPSHRLAVDPDGPVALAAQIHADGYRAALVGLGGRLVATAPGCGIVDADPAQIISEVVRAGAELLHASGRRCVGAGLAVPSAVAEPDGTALNPLHLAWEAGAPVRDTFRACLAEARVTGPADGAPVTGFAANDLNVAALAEYRHGAGRGARHLLVVGTGHHGVGGALVLDGRLHTGSSGLALEVGHLTVDPDGRPCHCGSRGCLDVETDPAALFAAAGRAPVSGGGSLLSQAGELIRDRYPRDARVREAVERLIDRLGLGLAGLVNILNPDRIVLAGLHRHLVEADGERLRGVVADRSLWGRSGSVPVLPSSLEHSSLVGAAELAWQPVLDDPIGVLGG
>NZ_CP048875.1|WP_016467379.1|1135628_1136147_-|GNAT-family-N-acetyltransferase
MRIRAGVPGDLGRLQEIERAAGCWFRDLGMDEIADDEPPSTASLREYAEAGGLWVVTDGAEDAPVAYALTEPVDGCLHVEQISVHPGHARRGIGRALLAELADRAAADGLPALTLTTFTDVPWNAPYYARLGFRTLEEDALTPGLRRIREREAAAGLDRWPRVCMRRETAAG
>NZ_CP048875.1|WP_033229701.1|1134930_1135536_+|ATP-binding-protein
MEFQALPSRIGQVRRIVSAQLHHWRLEALIDATALGLTELLTNVHQHAEAEDGTGDGRGGRTAKHCTVELTFAWGRLTVSVHDHDPRLPRVRGSAGRERLSTHGRGLALVAAISESWGVRAQRDGSGKTVWFSLPVPSPAPAREGRTRPGAAAREGAAREGAARDGRAGEPGADTAPADRRPAVTPAPVLPPAGIEAATAG
>NZ_CP048875.1|WP_016467377.1|1134424_1134736_+|hypothetical-protein
MVEPEYDAAGVGIGRMLRSLTRAGHVLVRNGELVLMTSYGSEIDSAPVEDVRISGYGLRDRTVATLRGRSYWLRIGLGHREGLLSALRTARAKSAAERGVLGT
>NZ_CP048875.1|WP_016467376.1|1133145_1134288_-|PLP-dependent-cysteine-synthase-family-protein
MIGSVSATEPAPAAPGPSTQDVDRSDTAYRDWLKEAVRKVRAENGRSADTHLLSFPLPEEWGIDLYLKDESTHPTGSLKHRLARSLFLYALCNGWIRPGRPVIEASSGSTAVSEAYFAKLIGVPFIAVMPRTTSREKTRLIEFQGGTCHLVDDPRTVYEVSARLAADSGGHFMDQFTYAERATDWRGNNNIAMSVYEQLCRERYPVPAWIVVTAGTGGTSATFARYIRYMQYDTRVCVPDPENSCFFDGWTRGDPGATSTAGSRIEGIGRPRMEPSFVPGAIDRMMKVPDAASVAAVRALDRVLGRKAGGSTGTGLWSSLKIVAEMLSRGERGSVVTLLCDPGDRYLDKYYSDAWLAEQGLDITPYAHTLEHFLATGEWR
>NZ_CP048875.1|WP_016467375.1|1132652_1133126_+|SRPBCC-family-protein
MARRLRLVELDFADTAPLRLSFTADVGASAETVYAALADEVETWPSWFSSVAEVTPAQGGKGRDVRLKGGGFFSETIMAALPAERYTYRIDRTNVPGVRAMMEDWNLAVSPAGGTRVRWTMAVDAPPLLRAAMRLGRPGIGASFRQAMRALERRLAA
>NZ_CP048875.1|WP_016467374.1|1131624_1132485_+|DeoR/GlpR-transcriptional-regulator
MSDNQNLLAEQRRALILEEVRRRGGARVNELTRKLSVSDMTVRRDLDALARQGALEKVHGGAVPVAEASTHEPGFEAKSSLELSAKEDIARAAATMAQPGSAIALSGGTTTFALARHLLDVPHLTVVTNSVRVADVFHAAQRAQGQGPGGRPGAATVVLTGGVRTPSDSLVGSVADAAIRSLHFDALFLGVHGISVEAGLSTPNLAEAETNRHFVGSARRVIVVADHTKWGTVGLSSFASLDQVDTLVTDSGMPPQARAEIRERLPELVVAGEQEEPGEETPLREL
>NZ_CP048875.1|WP_031175447.1|1128887_1131407_-|membrane-protein
MPSDHPATAPHHTPAEEDRTDDGGPGLALELLVHGVGGTTPAEMLGDPRTVRVTGDSTAAVHRRAEDKDAELHPRDHAAEPVQEAYCWSNLTSGNGARALWLILLPFMVANLAHWTRPAADGHRTTVRLHGLLVRLLALSLTVLMVAAACEVALDLVAWQCAGSTACAGDRGWLAFMAPSGDAGGPDGWWSQPGRRLALAAVLPAAVTGLLWWLSHRTWSAYESQQPLRRTVPEDHPAADGRPPLSLPGFWYGRRLVLRLRAAHTAAGFLTVAAALTAAATRHDRKPGGSTALDVCGWLLEGLLLAGAGCVLYVVSRRGRKESEPDDHVDHLAVRALPGASLVVLLLAVVHSGWNRPGWRSGGSLPGDETFGVLAVLQGALVVALGLLGLRLHRRTRVPRTALAGLASAAVAMLACALGGLLSGGVSQRVADWLDGPGTPGEGGGLTGPPTILTWQASIIPVLLLFVALLACWFAVRVWRDTRRLTDEVTAGYPDCVPDATRSRTIASAVARAGITDEAPWLVATVAATTLVLGGVAVLGTLWTGQVPGEATNGAPAVVAGFADTVQALGSWLIGLGFVLLLTWSRRAYKDASARRTVGILWDVGTFWPRSAHPFAPPCYAERAVPDLAWRMALWTDRHPERRLVISGHSQGSVLSAAAVWQLDPATRRQIALLTYGSPLERLYGRWFPAYFGPRQLAALHGGLECWRNLWRLTDPIGGPVRPEKAGTPEPGPPEECRGVDRGPLLDPLAYGRTREQPLPEPILGHGDYQADPAFAEERAGLLARLRKRSPARHSGIPRQPEPERQTAAGTRPEPGPGAERRTGGGRSAHAAGPGRSPG
>NZ_CP048875.1|WP_030408736.1|1126455_1128921_+|AAA-family-ATPase
MAHGSVQVTHSGTSRWRRRTGEYASLSAALEAAGDGDVLTIAPGTYRENLVIEHMVTLRGPERSGSGPVRIAPADGVALTLRSAALVQDLQIEGQDSAVPAVLVEDAAPELVGLRVMTRSAAGIEVRGGARPTVRRCTVDNPAGLGISVTGGAGGVYEECEVVAAGQSGIMVRDGARPRLTACRVHLASGAGISLQGEGSTLEAVGCEVYEIKGSGVRVGARASGHFTDCQVHRTSADGVTLENDAVLTLADCDIHDIPENAIDLRSRSVLTLTRSTVRRFGRNGLSVWDPGTRADANNCEIHDSTGDYPAVWISDGATAVLDSCRVHTVPDALFVLDRGSRADVLDSDLSQVRGTAVSVSDGAVVQLDDTRISKAATGAWFRDHGSGGVLNGCTIDEAATGVIVTKGADPTVERCTVSGAAEAGFYVSAEGRGTFHNCRVTGSRGYGFHIIDGCRTTLRRCRTDRCTRGGYEFAEEGPTVEDCTSDESAAAVSALSAPAPAAPSPAPDATTGLLTAKAVVPRQRTDSPRAQTAPAPGTAPAGEEAGGDAARPAQEVLGELDALVGLDSVKREVRALTDMIEVGRRRQAAGLKAASVRRHLVFTGAPGTGKTTVARLYGEILRSLGVLRRGHLVEVSRVDLVGEHIGSTAIRTQEAFERAKGGVLFIDEAYALAPQDGGRDFGREAIDTLVKLMEDHRDDVVVIVAGYTAEMEHFLAANPGVASRFSRTIAFGDYTPEELLLIVERQAEEQQYHLAEGARQALLGYFARLPKGPSFGNGRTARQTFETMVERHAGRVAQLPDPDTDDLTLLYPGDLPGPAA
>NZ_CP048875.1|WP_016467382.1|1139153_1140071_+|alpha/beta-fold-hydrolase
MNDTWTLDRSYESAEGTVRWAALGDPAAPPVVLLHGTPWSSYTWRGIARALAADHRVYVWDMPGYGTSARHEGQDVSLRAQGRLFAELLEHWQPAQPAVVAHDFGGAVALRAHLLHGARYSRLALVDAVASAPWGSDTYRLLGGHAEVFTRLPSLLHGALVREYISSVGGPGLRADVLERLAEPWLDEAGQAAFYWQIAQNDQRWTDEIEDRYSSLDLPVLVCWGTEDAWLPVGHARRLAATIPGARLQLLAGAGHLVQEDAPAELTATLRRFLRGEPPAAVTGPAQAQAHAQAQAQTPVPAPAS
>NZ_CP048875.1|WP_016467383.1|1140083_1140863_-|TetR/AcrR-family-transcriptional-regulator
MTGTAKTTSTTPGGARSTGTRKARSAPIQGVRQRARGEITGAIKDEARRQLAEVGAARLSLRAVARELGMVSSALYRYFPSRDDLLTALIIDAYDALGAAAEAALAEAEAVGDSHLARWLAVCRAVRGWALAHPHEYALIYGSPVPGYAAPSSTVEPASRAARVLLTVLRDAYEAGALREPDRDVAAPDELLEEARGLAGELGLRLPPAVVVEAVAVWSQLFGLVSFESFGQFVKVVGARDLFFDHAAARLADQAGLRR
>NZ_CP048875.1|WP_016467384.1|1141238_1141703_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MAILTPPAHVKRPGWFTRSVMNRVVTWLSRRGVSLAGAAVLAVEGRKTGEIRRAPVNPLRHEGEVYLVAPRGHVQWTHNLRAAGGAELCHGRRGRRFTAVEVPDAEKPEILREYLRKWKWEIGAFFPGLGPDAPREALLEAAPRYPVFRLTYTD
>NZ_CP048875.1|WP_031175449.1|1142038_1143508_-|geranylgeranyl-reductase-family-protein
MSSENAAGNEDAEPTVDRAQDRPVWDVVVVGAGPAGASAAYAAAVAGRKVLLLEKAELPRYKTCGGGIIGPSRDALPPGFDLPLRDRVHAVTFTLNGKLSRTRRSRTMLFGLVNRPEFDNALVESAVKAGAEVRTGVTVSRVEQHGPAVPDRRTVAVVLSGEDEPVLARAVVGADGSASRIGAHVGVKAEQVDLGLEAEIPVPDSVAEDWAGRVLVDWGPLPGSYGWVFPKGDTLTVGVIAARGDGAATKRYLDDFIGRLGLAGFEPRISSGHLTRCRADDSPLSRGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWAVRIAEAHDAVDARRQALNYAFAVKAGLGVEMGVGRRLLRIYARRPGLFHAALTGFRPAWNVFARFTRGATSLAEVVRVHPVARRALDAFDRREAEREGCEGRETGNAERGADTENGSRDGAVGAAAGAAPQKGARADRRSEGESGGRTGGESGDNGESDGGTATRRSA
>NZ_CP048875.1|WP_106963657.1|1143827_1145159_+|dipeptidase
MMPRAKSELAELVAFRSVADPEQFPRSECEGAAEWIARALRAEGFQDVATLDTPDGTQSVYGFLPGPEGAPTVLLYAHYDVQPPLDEAAWRTPPFELTDGADGRWYGRGAADCKGGFIMHLLALRAVRENGGLPVSVKMIVEGSEEQGTGGLEEYARSRPELLAADAIVIGDAGNFRCGLPTVTATLRGMALLRVQVDTLEGNLHSGLFGGAAPDALAALLRTLDSLRDADGNTVIDGLEAGAPWEGMPYPEEDFRQDAKVLDGVGLLGSGAVADRLWARPAVTVLGIDCPPVVGATPSVHASARALVSLRIPPGTDVEKAVELLVAHVESHVPWQARVTTELVGKGQPFSADTTSPAYSAMADALRAAYDGQEMQISGMGGSIPLCNALDALYPEAEILLIGLSEPEAQIHAVNESVDPRELERMAVAEALFLRGYAAQAAG
>NZ_CP048875.1|WP_016467387.1|1145453_1146491_-|NUDIX-hydrolase
MIVWLNGAFGAGKTTAAYELLDLLPGSTLYDPEVIGAGLRWMLPKERLGQIADFQDLRSWRRLVVETAAALLTEVPGPLITPMTLLRREYRDEMFGAFAARRIPVRHLLLHAEEPALRARIDARAAADGGTTRAWCLGHLHPYQAALPWITAEAHTVNTTHLTPRRTAERLADAIRAGEGAVDIVQTPEPTGETVAAGVLLFDDRDRVLLVDPTYKPGWEFPGGVVERGEAPSVAGVREVFEELGLRLTGEPALLVVDWEPPHPPAFGGMRLLFDGGRLDEDDAAALLLPSAELRGWRFVTEDEAAQLLPPNRLERLRCALRARRSGHPLYLEAGVPTGCRHLLR
>NZ_CP048875.1|WP_030408742.1|1146716_1147286_-|TIGR03086-family-protein
MANALSPLMDSAARATEPVIRGIADDQLSAPTPCAEYDVHALLNHLFHVVVSFQGLAAKEPADFSTTPDYVTGDWRSRFGEETVKLVEAWSAPDALDGVSPGMGLPQRTVAHMVIGDVVVHGWDLARATGQEYRPDMAALGEIRPAFEEIGPMARKAGVFGEEVPVPPDATPFEKLLAGTGRDPHWSPC
>NZ_CP048875.1|WP_164440277.1|1147790_1148729_+|AraC-family-transcriptional-regulator
MPRRAGGRPLPAAAEGTRRDTRGIVEAPELLARVRFRRRPAAPALRRWVEHYWLIDWDLTQPYVAQVVPHPCVNVVFERRGPAGLAPGAGVVAGPASELFTTKLEGVGRVCGIQFRPGGFRPFLTPPRPLTTLTGGQLPLPAVFGDGEAVTAAPSRVLDPTSEDARVAALDGFLLSLSPVADPQADRAMALAGRIRHDRSVRRVEELAADEGLSVRALQRLFAAYVGIGPKQAILRYRVHEALEHATEHRTTDWAALASELGYSDQAHLVRDFTAAVGLTPAAYAARCGGGATSRHYGHEGEPAAGRQVPHS
>NZ_CP048875.1|WP_016467390.1|1148941_1149268_+|hypothetical-protein
MSGHHSDALPLPDYDQLPAGSVEHRIRSLESNEVRQLLEHERGHADRPQVKEVLTARLEQLASGAQPSGGDARAEGPDVPTGARGGSSVSPASAAEPDEPLRHGKYEP
>NZ_CP048875.1|WP_031026735.1|1149458_1150403_-|ROK-family-protein
MPNDLVAALDIGGTKIAGALVDGDGRLLVRTQRPTPARESAARMSDAVDDVLRELTTAPDWDRVRAVGIGSAGPVDAKAGTVSPVNIPVWRDHPLVAGVRDRVGALPVSLIGDGPAIAAAEHWQGAARGRADALCMVVSTGVGGGLVLGGVLHSGPTGNAGHIGHISVDMDGELCPCGGHGCVETIASGTNIARHALAAGWQPGPDGDATAAGVAAAARAGDPLARAAFARAARALAAGIAATAALVEIEIAVIGGGVARAGDVLFTPLRAELTRYATLPYVQGLEIAPATTGTDAGLVGAAAAGWRALGAEVA

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Crispr_ID: NZ_CP048875_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_3

1258391-1258629

Orphan

Consensus_repeat	Method
CAGCAGCCCGGGTACGGACAGCAGCCGAC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP048875_3

>merge|NZ_CP048875|3|1258391-1258629|CRISPRCasFinder
CAGCAGCCCGGGGGCGAGCAGAACCCTCAACAGCCCAACCCGTACCAGCAGCCGGGTTATCAGCAGCCGAACCCGTACCAGCAGCCCGGGTACGGACAGCAGCCGACAGGCGGGCAACCGGGATACGGGGAGCAGCCCGCGGCTCAGCAGCCCGGGTACGGACAGCAGCCGACGGGTGGTCAGCCCGGGTACGGACAGCCGGCGGCGGGGCAGCAGCCCGGGTACGGACAGCAGCAGCC

>NZ_CP048875|3|3|1258391-1258629|CRISPRCasFinder
CAGCAGCCCGGGGGCGAGCAGAACCCTCA	ACAGCCCAACCCGTACCAGCAGCCGGGTTATCAGCAGCCGAACCCGTAC
CAGCAGCCCGGGTACGGACAGCAGCCGAC	AGGCGGGCAACCGGGATACGGGGAGCAGCCCGCGGCT
CAGCAGCCCGGGTACGGACAGCAGCCGAC	GGGTGGTCAGCCCGGGTACGGACAGCCGGCGGCGGGG
CAGCAGCCCGGGTACGGACAGCAGCAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_051705655.1\|1261609_1262371_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP048875.1\|WP_016467501.1\|1264549_1264882_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016467485.1\|1252235_1252658_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224745
NZ_CP048875.1\|WP_164439297.1\|1253806_1254394_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|380339
NZ_CP048875.1\|WP_041968877.1\|1264996_1265182_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439298.1\|1260537_1261137_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237184
NZ_CP048875.1\|WP_164439300.1\|1263751_1264450_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239796
NZ_CP048875.1\|WP_031026816.1\|1257717_1258173_-\|DUF4442-domain-containing-protein	unknown	unknown	gnl\|CDD\|373120
NZ_CP048875.1\|WP_106967454.1\|1259626_1260460_-\|spermidine-synthase-like-protein	unknown	unknown	gnl\|CDD\|179854
NZ_CP048875.1\|WP_030408106.1\|1255373_1256105_-\|acyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP048875.1\|WP_055500182.1\|1263420_1263612_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_030408107.1\|1256218_1256767_-\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP048875.1\|WP_016467489.1\|1254483_1255356_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|225308
NZ_CP048875.1\|WP_164439296.1\|1250058_1251306_-\|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl\|CDD\|273178
NZ_CP048875.1\|WP_016467503.1\|1265375_1265588_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439299.1\|1262404_1263277_+\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|237134
NZ_CP048875.1\|WP_030408103.1\|1252668_1253169_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP048875.1\|WP_016467484.1\|1251474_1252122_-\|YigZ-family-protein	unknown	unknown	gnl\|CDD\|224653
NZ_CP048875.1\|WP_016467487.1\|1253214_1253775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240137
NZ_CP048875.1\|WP_016467504.1\|1265754_1266030_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_051705655.1\|1261609_1262371_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	5.05131e-26
NZ_CP048875.1\|WP_016467485.1\|1252235_1252658_+\|hypothetical-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	1.27651e-48
NZ_CP048875.1\|WP_164439297.1\|1253806_1254394_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	3.13839e-17
NZ_CP048875.1\|WP_164439298.1\|1260537_1261137_-\|hypothetical-protein	gnl\|CDD\|237184	PRK12736, PRK12736, elongation factor Tu; Reviewed.	4.51737e-34
NZ_CP048875.1\|WP_164439300.1\|1263751_1264450_-\|hypothetical-protein	gnl\|CDD\|239796	cd04268, ZnMc_MMP_like, Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix metalloproteinases (MMPs), serralysins, and the astacin_like family of proteases.	1.92797e-05
NZ_CP048875.1\|WP_031026816.1\|1257717_1258173_-\|DUF4442-domain-containing-protein	gnl\|CDD\|373120	pfam14539, DUF4442, Domain of unknown function (DUF4442). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 139 and 165 amino acids in length. There is a conserved PYF sequence motif. There is a single completely conserved residue N that may be functionally important.	3.46266e-25
NZ_CP048875.1\|WP_106967454.1\|1259626_1260460_-\|spermidine-synthase-like-protein	gnl\|CDD\|179854	PRK04457, PRK04457, polyamine aminopropyltransferase.	2.90933e-15
NZ_CP048875.1\|WP_030408106.1\|1255373_1256105_-\|acyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	6.98704e-42
NZ_CP048875.1\|WP_030408107.1\|1256218_1256767_-\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	2.12821e-79
NZ_CP048875.1\|WP_016467489.1\|1254483_1255356_+\|DMT-family-transporter	gnl\|CDD\|225308	COG2510, COG2510, Predicted membrane protein [Function unknown].	1.37635e-05
NZ_CP048875.1\|WP_164439296.1\|1250058_1251306_-\|exonuclease-SbcCD-subunit-D	gnl\|CDD\|273178	TIGR00619, Nuclease_SbcCD_subunit_D, exonuclease SbcD. All proteins in this family for which functions are known are double-stranded DNA exonuclease (as part of a complex with SbcC homologs). This complex functions in the initiation of recombination and recombinational repair and is particularly important in regulating the stability of DNA sections that can form secondary structures. This family is likely homologous to the MRE11 family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	3.70025e-53
NZ_CP048875.1\|WP_164439299.1\|1262404_1263277_+\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|237134	PRK12554, PRK12554, undecaprenyl pyrophosphate phosphatase; Reviewed.	8.70687e-140
NZ_CP048875.1\|WP_030408103.1\|1252668_1253169_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.92291e-09
NZ_CP048875.1\|WP_016467484.1\|1251474_1252122_-\|YigZ-family-protein	gnl\|CDD\|224653	COG1739, COG1739, Uncharacterized conserved protein [Function unknown].	1.17791e-63
NZ_CP048875.1\|WP_016467487.1\|1253214_1253775_-\|hypothetical-protein	gnl\|CDD\|240137	cd04939, PA2301, PA2301 is an uncharacterized Pseudomonas aeruginosa protein with a YbaK-like domain of unknown function. The YbaK-like domain family includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, and ProX. The primary function of INS is to hydrolyze mischarged cysteinyl-tRNA(Pro)'s, thus helping ensure the fidelity of translation. Organisms whose ProRS lacks the INS domain express a single-domain INS homolog such as YbaK, ProX, or PrdX which supplies the function of INS in trans.	7.74981e-67

>NZ_CP048875.1|WP_031026816.1|1257717_1258173_-|DUF4442-domain-containing-protein
MTTESQPDIGAMMTAAVPMARTLNLEYLETSPERVVVALPDQSAFHNHVGGPHAGAMFTLAESASGAITLAAFADQLSRAVPLPVHVELDFKKIAKGVVTATARLGRPAAEVVAELDRGERPEFPVKVTLTRPDGVVTSEMTIVWTLRPND
>NZ_CP048875.1|WP_030408107.1|1256218_1256767_-|gamma-carbonic-anhydrase-family-protein
MTAQGLVVTVGGHAPRLDAGAFRAPASVVAGEVTMAAGSSLWYGAVLRADAGPIVLGEDSNVQDNCTVHGDPGFPVTVGARVTVGHNAVLHGCTVEDDVLIGMGATVLNGAHIGAGSLVAAQTLVPQGMVVPPGSLVAGVPGKVRRELTDEEREGVRLNALAYMELAQRHREASTDGRPATS
>NZ_CP048875.1|WP_030408106.1|1255373_1256105_-|acyltransferase
MPSLRNTFSSLSSRALHGIWRRVQSAGAVTARRPGPYAFRRIGTGTRLAFPQGTVFGTPWIELGDHCVIGQDVTLTAGMMPDLDLGPDTVLRLGNGVVLGRGSHIIADTRVEVGDDVFCGPYVYITSTNHSYDDPARPVGKQWPRTAPVEIGPGSWIGAGAVVLPGATLGRNVVVAAGAVVRGRVPDHAVVAGAPAKVVRRLDPEKGWQPPLRTPPPVPVPEGVTPQELLALAELPQQPGGEG
>NZ_CP048875.1|WP_016467489.1|1254483_1255356_+|DMT-family-transporter
MTAVFALATSLLWGLADFGGGMLSKRLRELTVVVVSQGAACLVLGGIVLGTGAWSELDARLLWCAVAAGAIGPVSMLCFYRALAVGPMGVVSPVATLGSVAVPVAVGMVLHGERPGLIQAAGSLVAVTGVVLAGGIGGGGAPVRQRTILLTLVAAFGFGATMSLVAEASMTVTGLFLTLFVQRLVNVVVGGGALFVSARRGTPALPEAGMRAVWGSLPALAFVGLADVAANGTYAVAAQHGPVTVAAVLASLYPVVTALAARGVLRERLQGLQTAGAGLALLGTVLLASG
>NZ_CP048875.1|WP_164439297.1|1253806_1254394_-|helix-turn-helix-domain-containing-protein
MVRNAVTDLDQLTQALARNLRHLRAERGFTLDALAARAGVSRGMLIQIEQARTNPSVGTVVKIGDALGVSITSLLDHEQGPQVRLVPPEQAIRLWSTESGSHSTLLAGTEAPGPLELWHWRLMPGDASLSDPHPAGTTELVHVATGTLTLQVDGSDHTVPAGTSACFSSHVPHGYRNDSTEPVEMTMAVSVPEPR
>NZ_CP048875.1|WP_016467487.1|1253214_1253775_-|hypothetical-protein
MRAPIGDFDNAWPAPEVLDRLTAPVAAAVRGWAGPVPADQLLYVETDPEKADTAVFVETYGKDLLETSANCVVISAKRGGERTLAAGVVLSSCRLDVNGAARRELGARKVSFAPHETAVSETGMEYGGITPVGLPGDWPLLIDAAVAELPWVLVGSGSRRGKLILPGKALATLPGAEVVEGLGQRI
>NZ_CP048875.1|WP_030408103.1|1252668_1253169_+|GNAT-family-N-acetyltransferase
MADTRTARVRRATARDAEEIVRLRRLMFTAMNGTDEPGDWEREAVRVARRQLAQEPSPLLALVVDGERTGLAACAVGRVEERLPAPGHPSGLFGFVFNVCTDEAYRGRGYARAATEALLAEFARRGVTRVDLHATPEAEAMYRSLGFAEHSIALSLDVSGQRRPHG
>NZ_CP048875.1|WP_016467485.1|1252235_1252658_+|hypothetical-protein
MYGDPATVREILTRLGDTWAVVGLSTNTSRPAYGVAEVLQRYGKRIVPVHPKAETVHGERGYASLAEIPFPVDVVDVFVNSALAGQVADEAVAVGAEAVWFQLGVVDEAAYARTTAAGLSMVMDRCPAIEIPRLGRGGVG
>NZ_CP048875.1|WP_016467484.1|1251474_1252122_-|YigZ-family-protein
MQQDQPTGPVEYVTVAAEGVHETEINRSRFLCALAPAATEADAQAFVARIRAEHPGANHNCWAYVIGADAGIQKASDDGEPGGTAGVPMLQMLLRREVRYVAAVVTRYFGGVKLGAGGLIRAYGGVVGEALDALGTVTRRRFRLVTVTVGHQRAGRLENDLRATGRQVRDVRYGAEVTIELGLPDADVPAFRGWLADATSGEARLELGGEAFGTV
>NZ_CP048875.1|WP_164439296.1|1250058_1251306_-|exonuclease-SbcCD-subunit-D
MRLLHTSDWHLGRSFHRVSLLDAQRAFLDHLVATVEERAVDAVLVAGDIYDRAVPSLAAVEMFDHALHRLAERAVPTVMISGNHDSPRRLGVGAALMDRAGVHLRTDPGACGTPVLLPDERGGEVAVYGIPYLEPALVRQTLGATGGSHTAVLGAAMDRVRADLAARPAGTRAVVLAHAFVTGAAASDSERDITVGGVASVPVSVFDGVHYAALGHLHNCQTITERVRYSGTPLAYSFSEAGHPKSMWLVDLAPDGGVTAERLHCPVPRPLARLSGTLDELLTDPAHEEHTDSWVEATLTDPARPHDPMARLEKRFPHIVSLVFAPEREETDDRRSYAVRLRNRTDRQIAEDFVGHVRPGRAAAPEERDMLGRALDAVRVAETEPHTPVAAPRTPASARTVDAPAAGPAGQEAAR
>NZ_CP048875.1|WP_106967454.1|1259626_1260460_-|spermidine-synthase-like-protein
MPRIRAVRGGEARLIPDIDRERAWLLTVEGAPQSYVDLDEPEHLEFEYARRVGHLLDAAAPAGAPLDVLHLGGGALALPRYVAASRPGSRQYVAEPDAELTAFVTEVLPLPEGAGVTVVAADGRAALEEAADGSADVLLADVYSGSRIPAHLTTLPYARQAARVLRTDGVYAANLADAAPFRFLASQLATFAEVFPYVAIVAEPAVLRGRRFGNVVLLASRREPPLEELARRCSADPFPARVEHGSALDRFLRGASPVGDASAVPSPEPPDGAFGIG
>NZ_CP048875.1|WP_164439298.1|1260537_1261137_-|hypothetical-protein
MSAHPHPVPHLTIGTLGHQGHGKTTLARALSVPRGAGGGPAGPVPGDPVAAPVPSGFPRRFRCATDTRRYTVLDPARATDRLDGAVLAVSVLEGVRPGTVEHVALARRIGLAPLVVALTMADEGHDVLTERVEAEVRTLLTAHGHNGETLPAVRVSAGRALAGEPRWRGTIDALLDAVDTYVPLPECERGHPGPRSHAG
>NZ_CP048875.1|WP_051705655.1|1261609_1262371_+|TVP38/TMEM64-family-protein
MLSPWCRLALLALLLCGAATAMLLYEPQRLLAHGWPPQWGGGTAVALFGAAYGLCTAAFVPRPVLNVAAGVLFGAQAGTFSATVGTVIGAGIAFGLGRLLGQDALRTLVRGRWMAAADRQLSRHGFRSMLVIRLLPGVPFAASNYGAAVSRMRWSAFLGATAVGSLPNTAAYVIAGSSAATPTSPVFLASFGFIALSGLAGAVFAWRKRAQLRGAGRRTEPAVCHGCGSPACGRPVPAVRERALTARGAADRR
>NZ_CP048875.1|WP_164439299.1|1262404_1263277_+|undecaprenyl-diphosphate-phosphatase
MSWFESFVLGLVQGLTEFLPISSSAHLRLVAAFAGWKDPGAAFTAVTQIGTEAAVLIFFRKDIGRILAAWFRSLHNREARHDPDARMGWLVIVGSVPIGVLGLAFKDQIEGPFRDLRLIATTLIVLGVILGIADRMAARQTKGGRHRVRREPKSLEQLTVRDGLLYGCAQALALVPGVSRSGATISGGLFMGYRREAAARYSFLLAVPAVLASGLFELMDTGEGHVAWGPTLFATALAFVVAYMVIAWFMRFISTRSFMPFVLYRIALGVALFALVAAGVLDPDAGPTGG
>NZ_CP048875.1|WP_055500182.1|1263420_1263612_-|hypothetical-protein
MTDQDARRERYARALYSTLGHSAERHPWAGLAPARREIWYQRADAAIAVADEEIAARLAARDA
>NZ_CP048875.1|WP_164439300.1|1263751_1264450_-|hypothetical-protein
MRRPLTAIALAVATATVLTTSQAGAAGVRTEGEGWKAAEIVGITSVSPVRTYTVTFRTDAIRERYAPYLGTAVRQLAAVGLRLRIGGVEPGDPRRCGPAYHIQFTEMYRPTGTPGWSQGAPCPHQPRGLGRGGLVAIDSEYFDGTYHIEPHVLANTVTHELLHALGLDHPNRDLDGDGTAAAYECVTTSAGVRPLMCSPNGGYRAAEAGRLTPFDLAGVEALLANARTRGIG
>NZ_CP048875.1|WP_016467501.1|1264549_1264882_-|hypothetical-protein
MSQPPSTGPHRDDDPGHRRPRSGTEPVTARSDLWLRTLLSSVGLPFFAAAAAALAWWATASGPHDSPSDRALSVLAAVCGLLALGAAVDLVVLRRRRAQERAARGREKRG
>NZ_CP048875.1|WP_041968877.1|1264996_1265182_-|hypothetical-protein
MLPGGEATPGRRVLCRMCGQPLRDRASRLWGLGPDCRHKLALRTAPPPPVRDVEQDPLPGL
>NZ_CP048875.1|WP_016467503.1|1265375_1265588_+|hypothetical-protein
MRIRTAVAAGALGAMALFAGTAGTATATERGGDPHPQHIHNDPDVVDATLCGNQIIAVLANATGVCKNNN
>NZ_CP048875.1|WP_016467504.1|1265754_1266030_+|hypothetical-protein
MENFYRGPAILLTGAAEVPVDAALYTETTGPGTAWSGTIRPEGSQPLWVELEGDSARLRLADGRVGRITILGSGFGTVQVNGEGPLPANPA

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Crispr_ID: NZ_CP048875_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_4

1282356-1283606

TypeI-E

I-E

Consensus_repeat	Method
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CRISPRCasFinder
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CRT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	PILER-CR

20 spacers

cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP048875_4

>merge|NZ_CP048875|4|1282356-1283606|CRISPRCasFinder,CRT,PILER-CR
ACTCCCCAAACCGCAGGCGCGGGGAGCACGGTCTGCTTCTGCTGCTGTTTCAGCAGATTGATGGGACCATCCCCGCGGGCGCGGGGAGCACGAGGAGGGGTGAGCCGTGGCCAGGTGGTGGCCGGGACCATCCCCGCGGGCGCGGGGAGCACCCCGGCGGCCTCCACGGTGGCCTTCCCGGCCTGGGACCATCCCCGCGGGCGCGGGGAGCACCGCGCCTGGCTGCACATGCCGGACCCCCACTGGGGACCATCCCCGCGGGCGCGGGGAGCACGAGCTGCGGTTCTACGACAGCGGCGGCGCCCAGGGACCATCCCCGCGGGCGCGGGGAGCACTGCCCCGGGAGCCCTCCATCTCTGGCAGGGTGGGGACCATCCCCGCGGGCGCGGGGAGCACCGAGAACGCCAAAAACGGGGCCTCTCGCGGCCGGGACCATCCCCGCGGGCGCGGGGAGCACGACGCGAGCCCGTGGCACCTGGTCGTCGCCTCGGGGACCATCCCCGCGGGCGCGGGGAGCACTACGCCTCCGTCCACGGCGGGTCAGGGGTGTCGGGACCATCCCCGCGGGCGCGGGGAGCACCGGGCGTGCTCGATTACGGCGTGCGCGCGTTTGGGACCATCCCCGCGGGCGCGGGGAGCACGACGTGTACGTATGCGATGCGTGCCCGGGGCAGGGACCATCCCCGCGGGCGCGGGGAGCACACCGAGTTGGCCCAGGAGCCGGAGCCGGAGCCGGGACCATCCCCGCGGGCGCGGGGAGCACGAAGGCGTCCAGCGTCGCGGCAAGCTGGTGCTGGGACCATCCCCGCGGGCGCGGGGAGCACCCCACAAAAGCACGGTTGTTGTAGCCAGTCCGGGGACCATCCCCGCGGGCGCGGGGAGCACACCGAGTTGGCCCAGGAGCCGGAGCCGGAGCCGGGACCATCCCCGCGGGCGCGGGGAGCACGAAGGCGTCCAGCGTCGCGGCAAGCTGGTGCTGGGACCATCCCCGCGGGCGCGGGGAGCACCCCACAAAAGCACGGTTGTTGTAGCCAGTCCGGGGACCATCCCCGCGGGCGCGGGGAGCACGACCCCAACCGCAAGTTGGTGTTCAGGCGCACGGGACCATCCCCGCGGGCGCGGGGAGCACAGTATCGGGGCCAGACAAACAGCGGAGGGGGCGGGACCATCCCCGCGGGCGCGGGGAGCACCTTTTTTTCGCCCGCATAGGCCGGTGGTGGGAGGGACCATCCCCGCGGGCGCGGGGAGCAC

>NZ_CP048875|4|4|1282356-1283606|CRISPRCasFinder
ACTCCCCAAACCGCAGGCGCGGGGAGCAC	GGTCTGCTTCTGCTGCTGTTTCAGCAGATTGAT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAGGAGGGGTGAGCCGTGGCCAGGTGGTGGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCCGGCGGCCTCCACGGTGGCCTTCCCGGCCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CGCGCCTGGCTGCACATGCCGGACCCCCACTG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAGCTGCGGTTCTACGACAGCGGCGGCGCCCA
GGGACCATCCCCGCGGGCGCGGGGAGCAC	TGCCCCGGGAGCCCTCCATCTCTGGCAGGGTG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CGAGAACGCCAAAAACGGGGCCTCTCGCGGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GACGCGAGCCCGTGGCACCTGGTCGTCGCCTCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	TACGCCTCCGTCCACGGCGGGTCAGGGGTGTC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CGGGCGTGCTCGATTACGGCGTGCGCGCGTTT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GACGTGTACGTATGCGATGCGTGCCCGGGGCA
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ACCGAGTTGGCCCAGGAGCCGGAGCCGGAGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAAGGCGTCCAGCGTCGCGGCAAGCTGGTGCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCCACAAAAGCACGGTTGTTGTAGCCAGTCCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ACCGAGTTGGCCCAGGAGCCGGAGCCGGAGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAAGGCGTCCAGCGTCGCGGCAAGCTGGTGCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCCACAAAAGCACGGTTGTTGTAGCCAGTCCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GACCCCAACCGCAAGTTGGTGTTCAGGCGCAC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	AGTATCGGGGCCAGACAAACAGCGGAGGGGGC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CTTTTTTTCGCCCGCATAGGCCGGTGGTGGGA
GGGACCATCCCCGCGGGCGCGGGGAGCAC

>NZ_CP048875|4|1|1282356-1283606|CRT
ACTCCCCAAACCGCAGGCGCGGGGAGCAC	GGTCTGCTTCTGCTGCTGTTTCAGCAGATTGAT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAGGAGGGGTGAGCCGTGGCCAGGTGGTGGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCCGGCGGCCTCCACGGTGGCCTTCCCGGCCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CGCGCCTGGCTGCACATGCCGGACCCCCACTG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAGCTGCGGTTCTACGACAGCGGCGGCGCCCA
GGGACCATCCCCGCGGGCGCGGGGAGCAC	TGCCCCGGGAGCCCTCCATCTCTGGCAGGGTG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CGAGAACGCCAAAAACGGGGCCTCTCGCGGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GACGCGAGCCCGTGGCACCTGGTCGTCGCCTCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	TACGCCTCCGTCCACGGCGGGTCAGGGGTGTC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CGGGCGTGCTCGATTACGGCGTGCGCGCGTTT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GACGTGTACGTATGCGATGCGTGCCCGGGGCA
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ACCGAGTTGGCCCAGGAGCCGGAGCCGGAGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAAGGCGTCCAGCGTCGCGGCAAGCTGGTGCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCCACAAAAGCACGGTTGTTGTAGCCAGTCCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ACCGAGTTGGCCCAGGAGCCGGAGCCGGAGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAAGGCGTCCAGCGTCGCGGCAAGCTGGTGCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCCACAAAAGCACGGTTGTTGTAGCCAGTCCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GACCCCAACCGCAAGTTGGTGTTCAGGCGCAC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	AGTATCGGGGCCAGACAAACAGCGGAGGGGGC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CTTTTTTTCGCCCGCATAGGCCGGTGGTGGGA
GGGACCATCCCCGCGGGCGCGGGGAGCAC

>NZ_CP048875|4|1|1282418-1283606|PILER-CR
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAGGAGGGGTGAGCCGTGGCCAGGTGGTGGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCCGGCGGCCTCCACGGTGGCCTTCCCGGCCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CGCGCCTGGCTGCACATGCCGGACCCCCACTG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAGCTGCGGTTCTACGACAGCGGCGGCGCCCA
GGGACCATCCCCGCGGGCGCGGGGAGCAC	TGCCCCGGGAGCCCTCCATCTCTGGCAGGGTG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CGAGAACGCCAAAAACGGGGCCTCTCGCGGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GACGCGAGCCCGTGGCACCTGGTCGTCGCCTCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	TACGCCTCCGTCCACGGCGGGTCAGGGGTGTC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CGGGCGTGCTCGATTACGGCGTGCGCGCGTTT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GACGTGTACGTATGCGATGCGTGCCCGGGGCA
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ACCGAGTTGGCCCAGGAGCCGGAGCCGGAGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAAGGCGTCCAGCGTCGCGGCAAGCTGGTGCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCCACAAAAGCACGGTTGTTGTAGCCAGTCCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ACCGAGTTGGCCCAGGAGCCGGAGCCGGAGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GAAGGCGTCCAGCGTCGCGGCAAGCTGGTGCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCCACAAAAGCACGGTTGTTGTAGCCAGTCCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GACCCCAACCGCAAGTTGGTGTTCAGGCGCAC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	AGTATCGGGGCCAGACAAACAGCGGAGGGGGC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CTTTTTTTCGCCCGCATAGGCCGGTGGTGGGA
GGGACCATCCCCGCGGGCGCGGGGAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_016467512.1\|1275082_1275856_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235975
NZ_CP048875.1\|WP_164440281.1\|1278196_1279447_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP048875.1\|WP_164439306.1\|1277272_1278091_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270694
NZ_CP048875.1\|WP_164439309.1\|1286525_1287743_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP048875.1\|WP_037614126.1\|1300666_1301677_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP048875.1\|WP_164439308.1\|1285746_1286529_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP048875.1\|WP_164439305.1\|1276862_1277276_-\|DUF3037-domain-containing-protein	unknown	unknown	gnl\|CDD\|378608
NZ_CP048875.1\|WP_030408120.1\|1272329_1272998_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
NZ_CP048875.1\|WP_078616249.1\|1280972_1281617_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|379263
NZ_CP048875.1\|WP_164440280.1\|1271629_1272127_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_078845703.1\|1279607_1280108_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP048875.1\|WP_164439307.1\|1285012_1285747_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_CP048875.1\|WP_158718292.1\|1298693_1300652_-\|regulator	unknown	unknown	gnl\|CDD\|379165
NZ_CP048875.1\|WP_164439304.1\|1273109_1274696_-\|peptide-binding-protein	unknown	unknown	gnl\|CDD\|173884
NZ_CP048875.1\|WP_016467513.1\|1275896_1276658_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187594
NZ_CP048875.1\|WP_158718293.1\|1301697_1302069_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439311.1\|1288713_1293513_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP048875.1\|WP_016470313.1\|1284052_1285006_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP048875.1\|WP_164439310.1\|1287832_1288714_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP048875.1\|WP_031031902.1\|1297144_1298365_-\|methyltransferase,-FxLD-system	unknown	unknown	gnl\|CDD\|275158

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_016467512.1\|1275082_1275856_-\|SDR-family-oxidoreductase	gnl\|CDD\|235975	PRK07231, FabG-like, SDR family oxidoreductase.	2.3279e-108
NZ_CP048875.1\|WP_164440281.1\|1278196_1279447_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.54286e-30
NZ_CP048875.1\|WP_164439306.1\|1277272_1278091_-\|hypothetical-protein	gnl\|CDD\|270694	cd05124, AFK, Catalytic domain of Actin-Fragmin Kinase. AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating actin polymerization. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.58629e-07
NZ_CP048875.1\|WP_164439309.1\|1286525_1287743_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	9.81204e-158
NZ_CP048875.1\|WP_164439308.1\|1285746_1286529_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.24664e-48
NZ_CP048875.1\|WP_164439305.1\|1276862_1277276_-\|DUF3037-domain-containing-protein	gnl\|CDD\|378608	pfam11236, DUF3037, Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	1.97682e-54
NZ_CP048875.1\|WP_030408120.1\|1272329_1272998_-\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	2.68166e-142
NZ_CP048875.1\|WP_078616249.1\|1280972_1281617_-\|SDR-family-oxidoreductase	gnl\|CDD\|379263	pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase.	2.31886e-17
NZ_CP048875.1\|WP_037614126.1\|1300666_1301677_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.4323e-07
NZ_CP048875.1\|WP_078845703.1\|1279607_1280108_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.9662e-11
NZ_CP048875.1\|WP_164439307.1\|1285012_1285747_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	4.34262e-73
NZ_CP048875.1\|WP_158718292.1\|1298693_1300652_-\|regulator	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	0.000627277
NZ_CP048875.1\|WP_164439304.1\|1273109_1274696_-\|peptide-binding-protein	gnl\|CDD\|173884	cd08519, PBP2_NikA_DppA_OppA_like_20, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.65999e-174
NZ_CP048875.1\|WP_016467513.1\|1275896_1276658_-\|SDR-family-oxidoreductase	gnl\|CDD\|187594	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs. This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.38775e-104
NZ_CP048875.1\|WP_164439311.1\|1288713_1293513_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	9.0823e-113
NZ_CP048875.1\|WP_016470313.1\|1284052_1285006_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.59353e-122
NZ_CP048875.1\|WP_164439310.1\|1287832_1288714_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	2.65234e-21
NZ_CP048875.1\|WP_031031902.1\|1297144_1298365_-\|methyltransferase,-FxLD-system	gnl\|CDD\|275158	TIGR04364, methyltran_FxLD, methyltransferase, FxLD system. Members of this family resemble occur regularly in the vicinity of lantibiotic biosynthesis enzymes and their probable target, the FxLD family of putative ribosomal natural product precursor (TIGR04363). Members resemble protein-L-isoaspartate O-methyltransferase (TIGR00080) and a predicted methyltranserase, TIGR04188, of another putative peptide modification system.	8.31952e-165

>NZ_CP048875.1|WP_078616249.1|1280972_1281617_-|SDR-family-oxidoreductase
MRQAAPIRGLVRARRNAADLLLRAPPGLLWAGPGQLPRREPRPEELRVLAVTAADRGIPGHRRIRGRARVHRLAPAADDHRRVAGCGLDVAGDRLLAQAGLPPAEGTAQAVVRVHRLGHQGPGRRGVRVNTVSPGPTRTDIWEAPGGFGERLAESLGQVPLENFLKQVPGAVGITTGRLTEPAEVAALVAYLASPHASNILGADLLDGGMLKTT
>NZ_CP048875.1|WP_078845703.1|1279607_1280108_-|helix-turn-helix-domain-containing-protein
MNCASATTTRCRKHGRIEDVDCADALPVVRVPSTEAPIECEVQVGCFACGSLPPVSRHSQAAPFPDYRLRHCLADGRIAVPTDRAPVAAFLNVKKAARYLGISENTLYVWRHRRLGPPSFRMGGRVMYRVSALDEWVERQEAADSRSNSFLSPLRYEPQRRSQSTD
>NZ_CP048875.1|WP_164440281.1|1278196_1279447_-|site-specific-integrase
MPGYIEDRWLKKRKDPVTGKKERTARYGKGKRYRVAGIPGVRDRSFETLEDAKAWLRRSSTDEERGEFVDPRDGSITLTDYIAKYWAPGKGGAPKTRQGQERKVRLHIVPHLGHLTLRQVTAAELRAFIAALESTVSSADYRRGILAELSAVLETAVDDRRIPRNPMRSKSVRWPKASKERREAWPLETALRVRDVISQRHRIAVVLGLGCGLRQGEAFGVGPDDIDWARGVLHVRKQVQALAGRLYFARPKGGKSRAVDMPASVAAELKQHIKSYPPVEVELPWGEPGADSPRKKYPLLLTTRFGNAVAANTWNTYTWKPALAKVGVIPPRVEGAKPWQWEAAPRDGFHVLRHTYASIMLEAGESVVTLARWLGHSSPTITLDHYAHFMPEAGDRGRSAIDALFDGRGSGSAARS
>NZ_CP048875.1|WP_164439306.1|1277272_1278091_-|hypothetical-protein
MLPEVTATRYVTPLREGGSLPGLVEADDLGTYVMKFTGAGQGRKTLVAEVLCAGLARRLGLRVPDLVRIWLDPVIGRSEPDEEVQQLLKASGGLNLGMDFLPGSLGFDALAYEVNAAEAGRVVWFDALVGNVDRSWRNPNMLVWHGDLWLIDHGATLIFHHNWAGAEAAAERPYDASDHALAPFGPRIEEAAAELAPRVTEGLLAECAAEIPDEWLADEAGFADPDAVRAAYTGVLAARARTIHERITVGEPSKDRPSQAPGWLTGKGGDAK
>NZ_CP048875.1|WP_164439305.1|1276862_1277276_-|DUF3037-domain-containing-protein
MTRTNTTTGARGDLDVFEYALLRVVPHVERGELINAGVLVYCRARSFLAARTHLDEDRLYALDPCADVRGVRAALRAVENVCFGGVRAGQAAGDDAGRRFRWLVAPRSTVVQPGPVHTGLTADPEAESERLLDLLVR
>NZ_CP048875.1|WP_016467513.1|1275896_1276658_-|SDR-family-oxidoreductase
MSSTEQRVAIVTGAARGIGAATAVRLATEGFVVAVLDLDEAACAGTVAQITEQGGKALAVGCDVSDSAQVEAAVTRVAQELGAPLVLVNNAGVLRDNLLFKMSDEDWDTVMNVHLRGAFLMSRACQKYMVDAGFGRIVNLSSSSALGNRGQVNYSAAKAGMQGFTKTLAKELGKFGITANAVAPGFIATDMTAATAERVGMNFEDFKAAAATQIPVQRVGEPADIANAVAFFTDEKAGYVSGQVLYVAGGPLD
>NZ_CP048875.1|WP_016467512.1|1275082_1275856_-|SDR-family-oxidoreductase
MAERAADGRQSGTGKVALVTGASRGIGYGIAEALVARGDRVCITGRNEDALKDAVERLGPDRAMGVAGKAHDPDHQAVAVERVMETYGRLDHLVNNAGTNPVFGPMAELDADVARKVFETNVLSALGFAQRTWAAWQREHGGTIVNIASFAGVTASPFIGAYGMSKAAMINLTLQLAHEFAPMVRVNALAPAVVKTKFAAALYEGREAEVVARYPMGRLGAPEDIAGAAAFLTSDESAWVTGQTLTLDGGLFLNAGV
>NZ_CP048875.1|WP_164439304.1|1273109_1274696_-|peptide-binding-protein
MFDRNGLRRAAATILPLALVAGCGALPGSGSQEKHRIVVGTTSAPSSLDPAAAWDGSWELYRNIYQTLMAVPNTGTSPEPDAARSCRFSDAASRVYRCVLREGLKFSSGGPLDADAVKHSFDRTTSIKSPSGPAALLDNLDEVRTRGKRTVVFRLKKPDATFPFVLSTPAASLVDPQEYPGATLHPDDTAAGSGPYTLRSYRPGKEALLVKNPDYKGPAELRNDSVTIRYYTSSRRMVDDLKAGRIDLTYRGLTPRQISAFQDAGSAGDDAVQLSEMTGSEVHFLVFNPKDAQAAKPAVRRAVAQLVDRKELVRDVHDRTADPLYSMVPTGVTGHTNAFLDRYGQPSEDKARAMLQQAGITTPVPLTLWYARDRYGDSTQREFAELKAQLERSGLFEITLRSRSWASFQKGYLKGAYPVFGRGWSADFPDADNYIAPFVGDHNAMGTPYRDRELTGRLLPTSRKQSDRGAAGQSLGEAQRRMARDARLLPLWQGKVYIASEKDVAGIEWAVDSSVIMRMWELYKKSSW
>NZ_CP048875.1|WP_030408120.1|1272329_1272998_-|uracil-DNA-glycosylase
MLPQSWQGVLGEETEKPYFKELAEFVEQERERGPVYPPREEVFAALDATPYDQVKVLILGQDPYHGPGQGHGLCFSVRPGVRTPPSLRNIYKEMREELGHPVPDNGYLMPWARQGVLLLNAVLTVREGEANSHKGKGWEKFTDAVIRAVADRPDPAVFVLWGNYAKKKLPLIDTERHAVVQGAHPSPLSAKRFFGSRPFTQINEAVAAQGHTPIDWRIPDLG
>NZ_CP048875.1|WP_164440280.1|1271629_1272127_-|hypothetical-protein
MVRIGQAIMLHRGGDREEARNRFAALWQETDPDPDADLFHRCTIAHYMADTQDDPADELAWDLRALAAADALHDGHRQGGEHQLAVRSLYPSLHLNVAAGHARLGNEDAARSALARAREKLAALAADAYGQGVRAAVERLEKQLSDGAAAPGGPLDGDGGAGHLP
>NZ_CP048875.1|WP_016470313.1|1284052_1285006_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTTISRRTTSTPRELTRVGDRISFVYLERCTVHRDDNAITATDTDGVTHIPAATIGTLLLGPGTRITHQAMSVLGECGAGVAWVGEHGVRFYAAGRALTRSSALAEAQATAWANRRTRLDVARAMYRLRFPDDDPAGRTRQELLNMEGRRVKECYRRESARTGVPWRRREYHHGDFSAGDVPNQAVTAAAQCMYGIAHAVVTALGCSPALGFVHSGHERSFVLDIADLYKTDIAIPAAFEAAAHGSDDVATRTRRALRDRINSTALLDRCVRDIKHVLNYEERSSTRAEPDADRMTVQTDGDVHIDSGRNHGEEPLW
>NZ_CP048875.1|WP_164439307.1|1285012_1285747_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLTRFRLNTGRSGTHRLLASPHQMHGAVNMSFPTAPPREDGGGPRVLWRVDHAPAGRADLFIVSPQRPDLTHLVEQAGWPTLDEPGWTTYAYGDFLDRLTAGDTWSFRLTANPVQHIRKPSDPNTPRKRTAHLTLRHQVRWLLERQEKAGFEILRKPAGRRLLPGQKDDPGDEYEVIVHNKVPHQFRKGDAPRNAKTDVRLVRVTYDGRLRITDPDALRRTLTCGLGKAKAYGCGLMTLAPEQ
>NZ_CP048875.1|WP_164439308.1|1285746_1286529_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MTTLLLRLAGPLQAWGSAARFARRGTENAPTKSGVLGLLAAAQGRPRNADLTDLAALRFGVRIDQPGSRLRDFQTAHHGDTDKAMPVSARFYLADAVFVAGVEGDSTLLQDLHEALAAPYFLPYLGRRSCPPSRPVHMGPPLDAPLEDALRDAPWQASAWYVRQLERTARRQGNPAGSGHQTLDVLTDCPPSQTPHLSQRDTPVSFDPRHRRYALRGIHTDSIPAPAAAPSQGPHDPTSVLAPVHPPRQGDAPPSFPETS
>NZ_CP048875.1|WP_164439309.1|1286525_1287743_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MKRLILDIHILQTVPPSNLNRDDTGTPKSAYFGGVRRARVSSQAWKRATREAFQELLPPEELGVRTKKVVAVLAEHIVAKNKDVDEAAALKLAEETLKTATGSSIAVPKRKARDDGEEAGVPESPYLMFLSRRQLDALAELALAGSGPDGQLSALKEYFKDKGHKAKARQAVDARHSVDIALFGRMVADASDLNVDAATQVAHALSVHKSDIESDYYTAVDDLSRDSESGAGMIGTIDFNSATLYRYAAVDINQLRRNLGAGLRDDESPNAPVEKAVGAFLEAFITSLPTGKINTFGNHTLPSAVLVKLRDRWPVSFVGAFEEPVPKSPAGGYLRHSCRKLADFVPELEKQYGLTASGIHNGSWLFRVGEETKALAEAELGTEVSLQDLIQEVKEAVARRLEQPA
>NZ_CP048875.1|WP_164439310.1|1287832_1288714_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MPTTDSRTSPRPDEDYGSLARAAALRTIGRLQSGYQRDVPAAVAAVARLRREAGRDPYASPSSWGLDDLADLSELREEKQREQDEQQEGREDARDVSAAARRRSEEREEREAQAVHLAVTLWALHQQSLRDEGMHRRGWPLGRAVRRLAHGKSGTAGRPSAHAPDGTDGDANGQQAVSARRQSDPVEEASESVRKRFVRLGTSSDYEILSERLRQFVLLLRAARIPLDYGLLAQQLFLWQDEFRREDIRRAWGREFHLVYARDTADGQQGETADTTPEDSAGDWNLFHDDGAD
>NZ_CP048875.1|WP_164439311.1|1288713_1293513_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MTTATEDLVEGFSYLSPVSRAAWAKHDRKTEGWLPLWRHMADSAAVAGQLWGCWIPASVRSLVAEVLPGGGRDAVRLVTFLAGVHDVGKCTPAFACQVEPLAARMRDVGLEMPTFREFGQERRLAPHGLAGQLLLQGWMGERFGLGGRTSGQFAVVAGGHHGVPPEHQQIHDLQLRPHLLRHPGPSEELWRAAQYELMDACAEVTGAGERFPAWVGVRLPQSAQVVLTAVVILSDWVASAPELFPYDPASWQPAGPVGDQRRLLAAWRGLGLPGPWTPEEPQEAPGELFGKRFPKLSGSGVRPVQAEAVHLARSMPGAGLLMIEAPMGEGKTEAALAAAEVLAARSGCGGVLVALPTRATGDAMFGRLLEWVEQLPHEEGEGSSVALAHAKAALNDTWAGLLQSARRAIAAVDVDEDGEVAGGSRSQLRRYQPSGLHAHQWLRGRKKQLLASFAVGTVDQVLFAGLKSRHLALRHLAVAGKVVVIDEVHAYDAYMNRYLDRVLGWLAAYRVPVVLLSATLPAGRRRELAAAYAGGAAAEEVETAADAYPLLTAVARDRPVLTSRPKAASGRRTHVVVERLTDDVPALVERLGEELADGGCALVVRNTVERVLQAADALRQRFGDQAVTVAHSRFLAADRAAVDARLVKLFGPDGSDRPERHVVVASQVVEQSLDVDFDLLVTDLAPVDLVLQRLGRLHRHPRQRPARLAQARCLVTGVDWAQTPPCPAKGSEAVYGGRHTLLRSLAVLEPHLNGEHLCLPDDISPLVQQAYGDECPVPAAWAQEAEDAQEQHRQLLEAKQNKAQSFLLGPVGRPGRPVYGWLEAHVGDADDTPAGRAQVRDSEETLEVLVIQRRADGVLTTVPWLDGGRSGGRGGLELPTDFPPSRRAAEAVAASALSLPGRFSKRWTIDRTIEELERFLVPAWQVKECPWLAGELLLILDEECQTRLSGFLLSYSPVDGLRLTTPDGPGQGGAVRRVGSAPAAADGKREGVEDAQHDEGLALDDAPGPAPDQSEQVPVRRGAVAAEDGAVKGGTVDPGGAPSFDLVTEPWLPVQRLDDGTVEEVSLRDLFTRAGEFRRLVGDLPTQEIALLRLMLAIVYDALEGPAELEDWEELWLAPDPFAAVPPYLERHRERFDLLHRDRPFYQVAGLRTARDEVAPLSRIVADVPVGSVFFSMRRPGVEKLSFAEAARWLVHVHAFDTSGIKSAMVGDEERAKAGKVYPLGVGSVGNLGGIFAEGATLRETLLLNLIALETAYADGTDHAGTGEDRPVWRRPQPGPGPRDAGPPTGLCDLYTWQSRRVLLHSEGGVVTGVVLGYGDPLTMPSPWTLEPMTGWRRSPVQEKQQKRSPFYTPRRHDPSRSAWRGLGALLPARQAMTDTGKRGEAAQTLPARITRWLARVITEGDVALPDKLVRLRLIGAVYGTQQSVVDEVVDDAVVLPIVTLHEKNPRYGAAAIDGVAWSEDAVTALGFLAGNLARAAGSDATGPVEAARELGFGALDGPFRAWVKDLLAFPDLEAARQAWRETVRTHIQQLGRQLLASAGPAADEGRMVDVPGIGIRWMDTGRAHVWFTDRLRKVLGDPLHDGGSPSTTDRGEKP
>NZ_CP048875.1|WP_031031902.1|1297144_1298365_-|methyltransferase,-FxLD-system
MTELPDENQAAELRNKVVDQLKEDGTIVSPGVEAAMRKVPRHLAVPEASLGDAYSTYNAVVTQEDEHGNHTSSVSAPQVQAMQLEQADVSPGDNVLEIGTNGPNAAYLAELAGSTGQVTTVDIDPAPAARSERFLADTGYTGVNVVVADAEDGYAKHAPYDAIVVTAGAWDIPPAWIEQLKDDGRLVVPLRINGLSRSYRFVRQDDHLVSTSAHVCGFVPVQGAGSHAQQAMQLPGDRGVTLHFDEGPPADPSLLNGVLDTERAETWTGVTVASQEPIGTLQMYLAAHVPTYCSMSIDRELATGRIGPTGLGFSMVAIDGANFGYIVVRRDTEKKTAEFGFHAFGPDGEAFAERLADIVRDWGRDYRRGPSPLIAVYPAGTPDDRITGDRIIDKEHSRISISWPVA
>NZ_CP048875.1|WP_158718292.1|1298693_1300652_-|regulator
MDQHSSLLSGTVHGAAVQAGTVHGGVHLHPGPSRPVRPRQLPAPARCFVDRTEDLRRMSAGRARAAAEGDPVWVVISGPPGVGKTAMAVRWIRSVEADYPDGQIHVDLHGDTARTAERPQEVLSRLLREVGAGPASLDVHEAAARWRSATAGMRLAVLLDNARSAAQVEPLLMSGPGTLTVITSRWRLTELAVAGAELHQLGPLDDAYAHEPAALRTDPLTPLAVTQEHPVTQALDQALSALDGDDARLYLLAGLLPPQVPLEPRLAAALTGFPLGKAAAGLERLADAHLLRPRAHDTYQMHDLVRDHAARRAQQQIRQPDRVLRRAFDYHLGHVAAAERLLCPTRPPQQRDRSWPEHLPAPQFAGERAALGWLHERSPGLMALLREAQAQGWNDAGWQLVDGLWPLWHRLHDLESWVAAHRIGLELARASGRPAAVRRMLTSGAAGLTAAAHYAEAGQWYAQARGLAAEAGDLRDEGQALLGLGAVAFEAGRPADGAPALHQAIKAWMRIGYRRGVALALVLLGEISLTQKDVSQARTHFRAAYHVFEKHVDDPFDHSRTRCFLAYTHFLTTPPEIDNGMALLDESIDYFTSEGRTYWYGRALEMKAHGAQAAGDTARARAFAEQALEAWHGRNVKDIPRVTAWLNNLPTP
>NZ_CP048875.1|WP_037614126.1|1300666_1301677_-|CPBP-family-intramembrane-metalloprotease
MNICCTVLGLYLLAAGVKLWQNVVAFADLCGLRVPDAQLVTEIGKGLTVASVAVTALWLFRLLDPPRRGSERRARRRVLAADLAAVLAVLAGLGLLVPALHAEAVGMAFQTVLLVWLAVVLVARSGVRPGDLGLPTRWRPRAPRTVSVLIGLAASAALVLAVFLLIVLATLPGPQGGQPPAEGLTELVDSVRSAVIEELVVSAAVIMLLTRAGIRPATCVLVSALMRALPHVYLGWQALAVLPLGLALGFLFVRYRRVMPLIAAHAARNTMVFLPGWALVALPVMTLLAVVGTLAALALVVRGPRADDWPPGSRGGTEASSRPTASRPNQPAQNRK
>NZ_CP048875.1|WP_158718293.1|1301697_1302069_-|hypothetical-protein
MAVQALDELSPALVGAVFSIQGRWGFFVPEESAEPPWPAGTRYLKAGAALTLPPACWKNATSSDAGWVRRPPDGRLLTPPLILHPMVTAASHREKQDSQRPVGEQPARESQPCSSHSTSESPS

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Crispr_ID: NZ_CP048875_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_5

1294896-1295595

TypeI-E

I-E

Consensus_repeat	Method
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CRISPRCasFinder
NGGGACCATCCCCGCGGGCGCGGGGAGCAC	CRT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	PILER-CR

11 spacers

cas8e,cse2gr11,cas7,cas5,cas6e,cas1

The CRISPR arrays of NZ_CP048875_5

>merge|NZ_CP048875|5|1294896-1295595|CRISPRCasFinder,CRT,PILER-CR
ACGGATCATCCCCCGGGCGCGGGGAGCACAACGGATCTCCTGGGCCGGTGTGGTCACGGCCGGGACCATCCCCGCGGGCGCGGGAAGCACATCGCGTGCGTCCAGGCCGTCAGATTTTTGAGGGGACCATCCCCGCGGGCGCGGGGAGCACGTGCTGTTCAACCTGCGCGGCTCGGCGTCGCCGGGACCATCCCCGCGGGCGCGGGGAGCACCCACCGCATTCCAAGGGCACTACGCGCGGTTCGGGACCATCCCCGCGGGCGCGGGGAGCACCTGCTGCCGATCCTGCCCCCGCTGGTGGACGCGGGACCATCCCCGCGGGCGCGGGGAGCACATGCGCGAGCCGCACCACGCGCACAGGTGGACGGGACCATCCCCGCGGGCGCGGGGAGCACATGCGCGAGCCGCACCACGCGCACAGGTGGACGGGACCATCCCCGCGGGCGCGGGGAGCACTAAATGAGGTATAGGGCCGGACCGGCCTCACGGGGACCATCCCCGCGGGCGCGGGGAGCACATCCATTCCGCGAACGCGGGCGAGAGGCGGCGGGGACCATCCCCGCGGGCGCGGGGAGCACACGGACTTCGTCTCCGAGCTGTCGCTTCTCCTGGGACCATCCCCGCGGGCGCGGGGAGCACCCTTCTGTCAGGGAGGTGATCGAGGCCTCGAAGGGACCATCCCCGCGGGCGCGGGGAGCAC

>NZ_CP048875|5|5|1294896-1295595|CRISPRCasFinder
ACGGATCATCCCCCGGGCGCGGGGAGCAC	AACGGATCTCCTGGGCCGGTGTGGTCACGGCC
GGGACCATCCCCGCGGGCGCGGGAAGCAC	ATCGCGTGCGTCCAGGCCGTCAGATTTTTGAG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GTGCTGTTCAACCTGCGCGGCTCGGCGTCGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCACCGCATTCCAAGGGCACTACGCGCGGTTC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CTGCTGCCGATCCTGCCCCCGCTGGTGGACGC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ATGCGCGAGCCGCACCACGCGCACAGGTGGAC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ATGCGCGAGCCGCACCACGCGCACAGGTGGAC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	TAAATGAGGTATAGGGCCGGACCGGCCTCACG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ATCCATTCCGCGAACGCGGGCGAGAGGCGGCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ACGGACTTCGTCTCCGAGCTGTCGCTTCTCCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCTTCTGTCAGGGAGGTGATCGAGGCCTCGAA
GGGACCATCCCCGCGGGCGCGGGGAGCAC

>NZ_CP048875|5|2|1294896-1295595|CRT
ACGGATCATCCCCCGGGCGCGGGGAGCAC	AACGGATCTCCTGGGCCGGTGTGGTCACGGCC
GGGACCATCCCCGCGGGCGCGGGAAGCAC	ATCGCGTGCGTCCAGGCCGTCAGATTTTTGAG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GTGCTGTTCAACCTGCGCGGCTCGGCGTCGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCACCGCATTCCAAGGGCACTACGCGCGGTTC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CTGCTGCCGATCCTGCCCCCGCTGGTGGACGC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ATGCGCGAGCCGCACCACGCGCACAGGTGGAC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ATGCGCGAGCCGCACCACGCGCACAGGTGGAC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	TAAATGAGGTATAGGGCCGGACCGGCCTCACG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ATCCATTCCGCGAACGCGGGCGAGAGGCGGCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ACGGACTTCGTCTCCGAGCTGTCGCTTCTCCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCTTCTGTCAGGGAGGTGATCGAGGCCTCGAA
GGGACCATCCCCGCGGGCGCGGGGAGCAC

>NZ_CP048875|5|2|1294957-1295595|PILER-CR
GGGACCATCCCCGCGGGCGCGGGAAGCAC	ATCGCGTGCGTCCAGGCCGTCAGATTTTTGAG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	GTGCTGTTCAACCTGCGCGGCTCGGCGTCGCC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCACCGCATTCCAAGGGCACTACGCGCGGTTC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CTGCTGCCGATCCTGCCCCCGCTGGTGGACGC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ATGCGCGAGCCGCACCACGCGCACAGGTGGAC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ATGCGCGAGCCGCACCACGCGCACAGGTGGAC
GGGACCATCCCCGCGGGCGCGGGGAGCAC	TAAATGAGGTATAGGGCCGGACCGGCCTCACG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ATCCATTCCGCGAACGCGGGCGAGAGGCGGCG
GGGACCATCCCCGCGGGCGCGGGGAGCAC	ACGGACTTCGTCTCCGAGCTGTCGCTTCTCCT
GGGACCATCCCCGCGGGCGCGGGGAGCAC	CCTTCTGTCAGGGAGGTGATCGAGGCCTCGAA
GGGACCATCCCCGCGGGCGCGGGGAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_164440281.1\|1278196_1279447_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP048875.1\|WP_164439306.1\|1277272_1278091_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270694
NZ_CP048875.1\|WP_164439309.1\|1286525_1287743_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP048875.1\|WP_031031912.1\|1304462_1305020_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP048875.1\|WP_037614127.1\|1305775_1308004_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377989
NZ_CP048875.1\|WP_164439308.1\|1285746_1286529_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP048875.1\|WP_164439312.1\|1302203_1303175_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|153418
NZ_CP048875.1\|WP_031031914.1\|1305009_1305375_-\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP048875.1\|WP_164439313.1\|1303205_1304447_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP048875.1\|WP_078616249.1\|1280972_1281617_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|379263
NZ_CP048875.1\|WP_037614126.1\|1300666_1301677_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP048875.1\|WP_078845703.1\|1279607_1280108_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP048875.1\|WP_164439307.1\|1285012_1285747_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_CP048875.1\|WP_031031917.1\|1305371_1305779_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214939
NZ_CP048875.1\|WP_158718292.1\|1298693_1300652_-\|regulator	unknown	unknown	gnl\|CDD\|379165
NZ_CP048875.1\|WP_158718293.1\|1301697_1302069_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439311.1\|1288713_1293513_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP048875.1\|WP_016470313.1\|1284052_1285006_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP048875.1\|WP_164439310.1\|1287832_1288714_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP048875.1\|WP_031031902.1\|1297144_1298365_-\|methyltransferase,-FxLD-system	unknown	unknown	gnl\|CDD\|275158

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_164440281.1\|1278196_1279447_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.54286e-30
NZ_CP048875.1\|WP_164439306.1\|1277272_1278091_-\|hypothetical-protein	gnl\|CDD\|270694	cd05124, AFK, Catalytic domain of Actin-Fragmin Kinase. AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating actin polymerization. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.58629e-07
NZ_CP048875.1\|WP_164439309.1\|1286525_1287743_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	9.81204e-158
NZ_CP048875.1\|WP_031031912.1\|1304462_1305020_-\|ATP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	2.8385e-44
NZ_CP048875.1\|WP_037614127.1\|1305775_1308004_-\|hypothetical-protein	gnl\|CDD\|377989	pfam08376, NIT, Nitrate and nitrite sensing. The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.	1.69929e-28
NZ_CP048875.1\|WP_164439308.1\|1285746_1286529_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.24664e-48
NZ_CP048875.1\|WP_164439312.1\|1302203_1303175_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|153418	cd07377, WHTH_GntR, Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators. This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.	3.95846e-13
NZ_CP048875.1\|WP_031031914.1\|1305009_1305375_-\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	2.29822e-15
NZ_CP048875.1\|WP_164439313.1\|1303205_1304447_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.60726e-63
NZ_CP048875.1\|WP_078616249.1\|1280972_1281617_-\|SDR-family-oxidoreductase	gnl\|CDD\|379263	pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase.	2.31886e-17
NZ_CP048875.1\|WP_037614126.1\|1300666_1301677_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.4323e-07
NZ_CP048875.1\|WP_078845703.1\|1279607_1280108_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.9662e-11
NZ_CP048875.1\|WP_164439307.1\|1285012_1285747_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	4.34262e-73
NZ_CP048875.1\|WP_031031917.1\|1305371_1305779_-\|hypothetical-protein	gnl\|CDD\|214939	smart00960, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	4.13064e-07
NZ_CP048875.1\|WP_158718292.1\|1298693_1300652_-\|regulator	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	0.000627277
NZ_CP048875.1\|WP_164439311.1\|1288713_1293513_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	9.0823e-113
NZ_CP048875.1\|WP_016470313.1\|1284052_1285006_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.59353e-122
NZ_CP048875.1\|WP_164439310.1\|1287832_1288714_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	2.65234e-21
NZ_CP048875.1\|WP_031031902.1\|1297144_1298365_-\|methyltransferase,-FxLD-system	gnl\|CDD\|275158	TIGR04364, methyltran_FxLD, methyltransferase, FxLD system. Members of this family resemble occur regularly in the vicinity of lantibiotic biosynthesis enzymes and their probable target, the FxLD family of putative ribosomal natural product precursor (TIGR04363). Members resemble protein-L-isoaspartate O-methyltransferase (TIGR00080) and a predicted methyltranserase, TIGR04188, of another putative peptide modification system.	8.31952e-165

>NZ_CP048875.1|WP_164439311.1|1288713_1293513_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MTTATEDLVEGFSYLSPVSRAAWAKHDRKTEGWLPLWRHMADSAAVAGQLWGCWIPASVRSLVAEVLPGGGRDAVRLVTFLAGVHDVGKCTPAFACQVEPLAARMRDVGLEMPTFREFGQERRLAPHGLAGQLLLQGWMGERFGLGGRTSGQFAVVAGGHHGVPPEHQQIHDLQLRPHLLRHPGPSEELWRAAQYELMDACAEVTGAGERFPAWVGVRLPQSAQVVLTAVVILSDWVASAPELFPYDPASWQPAGPVGDQRRLLAAWRGLGLPGPWTPEEPQEAPGELFGKRFPKLSGSGVRPVQAEAVHLARSMPGAGLLMIEAPMGEGKTEAALAAAEVLAARSGCGGVLVALPTRATGDAMFGRLLEWVEQLPHEEGEGSSVALAHAKAALNDTWAGLLQSARRAIAAVDVDEDGEVAGGSRSQLRRYQPSGLHAHQWLRGRKKQLLASFAVGTVDQVLFAGLKSRHLALRHLAVAGKVVVIDEVHAYDAYMNRYLDRVLGWLAAYRVPVVLLSATLPAGRRRELAAAYAGGAAAEEVETAADAYPLLTAVARDRPVLTSRPKAASGRRTHVVVERLTDDVPALVERLGEELADGGCALVVRNTVERVLQAADALRQRFGDQAVTVAHSRFLAADRAAVDARLVKLFGPDGSDRPERHVVVASQVVEQSLDVDFDLLVTDLAPVDLVLQRLGRLHRHPRQRPARLAQARCLVTGVDWAQTPPCPAKGSEAVYGGRHTLLRSLAVLEPHLNGEHLCLPDDISPLVQQAYGDECPVPAAWAQEAEDAQEQHRQLLEAKQNKAQSFLLGPVGRPGRPVYGWLEAHVGDADDTPAGRAQVRDSEETLEVLVIQRRADGVLTTVPWLDGGRSGGRGGLELPTDFPPSRRAAEAVAASALSLPGRFSKRWTIDRTIEELERFLVPAWQVKECPWLAGELLLILDEECQTRLSGFLLSYSPVDGLRLTTPDGPGQGGAVRRVGSAPAAADGKREGVEDAQHDEGLALDDAPGPAPDQSEQVPVRRGAVAAEDGAVKGGTVDPGGAPSFDLVTEPWLPVQRLDDGTVEEVSLRDLFTRAGEFRRLVGDLPTQEIALLRLMLAIVYDALEGPAELEDWEELWLAPDPFAAVPPYLERHRERFDLLHRDRPFYQVAGLRTARDEVAPLSRIVADVPVGSVFFSMRRPGVEKLSFAEAARWLVHVHAFDTSGIKSAMVGDEERAKAGKVYPLGVGSVGNLGGIFAEGATLRETLLLNLIALETAYADGTDHAGTGEDRPVWRRPQPGPGPRDAGPPTGLCDLYTWQSRRVLLHSEGGVVTGVVLGYGDPLTMPSPWTLEPMTGWRRSPVQEKQQKRSPFYTPRRHDPSRSAWRGLGALLPARQAMTDTGKRGEAAQTLPARITRWLARVITEGDVALPDKLVRLRLIGAVYGTQQSVVDEVVDDAVVLPIVTLHEKNPRYGAAAIDGVAWSEDAVTALGFLAGNLARAAGSDATGPVEAARELGFGALDGPFRAWVKDLLAFPDLEAARQAWRETVRTHIQQLGRQLLASAGPAADEGRMVDVPGIGIRWMDTGRAHVWFTDRLRKVLGDPLHDGGSPSTTDRGEKP
>NZ_CP048875.1|WP_164439310.1|1287832_1288714_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MPTTDSRTSPRPDEDYGSLARAAALRTIGRLQSGYQRDVPAAVAAVARLRREAGRDPYASPSSWGLDDLADLSELREEKQREQDEQQEGREDARDVSAAARRRSEEREEREAQAVHLAVTLWALHQQSLRDEGMHRRGWPLGRAVRRLAHGKSGTAGRPSAHAPDGTDGDANGQQAVSARRQSDPVEEASESVRKRFVRLGTSSDYEILSERLRQFVLLLRAARIPLDYGLLAQQLFLWQDEFRREDIRRAWGREFHLVYARDTADGQQGETADTTPEDSAGDWNLFHDDGAD
>NZ_CP048875.1|WP_164439309.1|1286525_1287743_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MKRLILDIHILQTVPPSNLNRDDTGTPKSAYFGGVRRARVSSQAWKRATREAFQELLPPEELGVRTKKVVAVLAEHIVAKNKDVDEAAALKLAEETLKTATGSSIAVPKRKARDDGEEAGVPESPYLMFLSRRQLDALAELALAGSGPDGQLSALKEYFKDKGHKAKARQAVDARHSVDIALFGRMVADASDLNVDAATQVAHALSVHKSDIESDYYTAVDDLSRDSESGAGMIGTIDFNSATLYRYAAVDINQLRRNLGAGLRDDESPNAPVEKAVGAFLEAFITSLPTGKINTFGNHTLPSAVLVKLRDRWPVSFVGAFEEPVPKSPAGGYLRHSCRKLADFVPELEKQYGLTASGIHNGSWLFRVGEETKALAEAELGTEVSLQDLIQEVKEAVARRLEQPA
>NZ_CP048875.1|WP_164439308.1|1285746_1286529_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MTTLLLRLAGPLQAWGSAARFARRGTENAPTKSGVLGLLAAAQGRPRNADLTDLAALRFGVRIDQPGSRLRDFQTAHHGDTDKAMPVSARFYLADAVFVAGVEGDSTLLQDLHEALAAPYFLPYLGRRSCPPSRPVHMGPPLDAPLEDALRDAPWQASAWYVRQLERTARRQGNPAGSGHQTLDVLTDCPPSQTPHLSQRDTPVSFDPRHRRYALRGIHTDSIPAPAAAPSQGPHDPTSVLAPVHPPRQGDAPPSFPETS
>NZ_CP048875.1|WP_164439307.1|1285012_1285747_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLTRFRLNTGRSGTHRLLASPHQMHGAVNMSFPTAPPREDGGGPRVLWRVDHAPAGRADLFIVSPQRPDLTHLVEQAGWPTLDEPGWTTYAYGDFLDRLTAGDTWSFRLTANPVQHIRKPSDPNTPRKRTAHLTLRHQVRWLLERQEKAGFEILRKPAGRRLLPGQKDDPGDEYEVIVHNKVPHQFRKGDAPRNAKTDVRLVRVTYDGRLRITDPDALRRTLTCGLGKAKAYGCGLMTLAPEQ
>NZ_CP048875.1|WP_016470313.1|1284052_1285006_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTTISRRTTSTPRELTRVGDRISFVYLERCTVHRDDNAITATDTDGVTHIPAATIGTLLLGPGTRITHQAMSVLGECGAGVAWVGEHGVRFYAAGRALTRSSALAEAQATAWANRRTRLDVARAMYRLRFPDDDPAGRTRQELLNMEGRRVKECYRRESARTGVPWRRREYHHGDFSAGDVPNQAVTAAAQCMYGIAHAVVTALGCSPALGFVHSGHERSFVLDIADLYKTDIAIPAAFEAAAHGSDDVATRTRRALRDRINSTALLDRCVRDIKHVLNYEERSSTRAEPDADRMTVQTDGDVHIDSGRNHGEEPLW
>NZ_CP048875.1|WP_078616249.1|1280972_1281617_-|SDR-family-oxidoreductase
MRQAAPIRGLVRARRNAADLLLRAPPGLLWAGPGQLPRREPRPEELRVLAVTAADRGIPGHRRIRGRARVHRLAPAADDHRRVAGCGLDVAGDRLLAQAGLPPAEGTAQAVVRVHRLGHQGPGRRGVRVNTVSPGPTRTDIWEAPGGFGERLAESLGQVPLENFLKQVPGAVGITTGRLTEPAEVAALVAYLASPHASNILGADLLDGGMLKTT
>NZ_CP048875.1|WP_078845703.1|1279607_1280108_-|helix-turn-helix-domain-containing-protein
MNCASATTTRCRKHGRIEDVDCADALPVVRVPSTEAPIECEVQVGCFACGSLPPVSRHSQAAPFPDYRLRHCLADGRIAVPTDRAPVAAFLNVKKAARYLGISENTLYVWRHRRLGPPSFRMGGRVMYRVSALDEWVERQEAADSRSNSFLSPLRYEPQRRSQSTD
>NZ_CP048875.1|WP_164440281.1|1278196_1279447_-|site-specific-integrase
MPGYIEDRWLKKRKDPVTGKKERTARYGKGKRYRVAGIPGVRDRSFETLEDAKAWLRRSSTDEERGEFVDPRDGSITLTDYIAKYWAPGKGGAPKTRQGQERKVRLHIVPHLGHLTLRQVTAAELRAFIAALESTVSSADYRRGILAELSAVLETAVDDRRIPRNPMRSKSVRWPKASKERREAWPLETALRVRDVISQRHRIAVVLGLGCGLRQGEAFGVGPDDIDWARGVLHVRKQVQALAGRLYFARPKGGKSRAVDMPASVAAELKQHIKSYPPVEVELPWGEPGADSPRKKYPLLLTTRFGNAVAANTWNTYTWKPALAKVGVIPPRVEGAKPWQWEAAPRDGFHVLRHTYASIMLEAGESVVTLARWLGHSSPTITLDHYAHFMPEAGDRGRSAIDALFDGRGSGSAARS
>NZ_CP048875.1|WP_164439306.1|1277272_1278091_-|hypothetical-protein
MLPEVTATRYVTPLREGGSLPGLVEADDLGTYVMKFTGAGQGRKTLVAEVLCAGLARRLGLRVPDLVRIWLDPVIGRSEPDEEVQQLLKASGGLNLGMDFLPGSLGFDALAYEVNAAEAGRVVWFDALVGNVDRSWRNPNMLVWHGDLWLIDHGATLIFHHNWAGAEAAAERPYDASDHALAPFGPRIEEAAAELAPRVTEGLLAECAAEIPDEWLADEAGFADPDAVRAAYTGVLAARARTIHERITVGEPSKDRPSQAPGWLTGKGGDAK
>NZ_CP048875.1|WP_031031902.1|1297144_1298365_-|methyltransferase,-FxLD-system
MTELPDENQAAELRNKVVDQLKEDGTIVSPGVEAAMRKVPRHLAVPEASLGDAYSTYNAVVTQEDEHGNHTSSVSAPQVQAMQLEQADVSPGDNVLEIGTNGPNAAYLAELAGSTGQVTTVDIDPAPAARSERFLADTGYTGVNVVVADAEDGYAKHAPYDAIVVTAGAWDIPPAWIEQLKDDGRLVVPLRINGLSRSYRFVRQDDHLVSTSAHVCGFVPVQGAGSHAQQAMQLPGDRGVTLHFDEGPPADPSLLNGVLDTERAETWTGVTVASQEPIGTLQMYLAAHVPTYCSMSIDRELATGRIGPTGLGFSMVAIDGANFGYIVVRRDTEKKTAEFGFHAFGPDGEAFAERLADIVRDWGRDYRRGPSPLIAVYPAGTPDDRITGDRIIDKEHSRISISWPVA
>NZ_CP048875.1|WP_158718292.1|1298693_1300652_-|regulator
MDQHSSLLSGTVHGAAVQAGTVHGGVHLHPGPSRPVRPRQLPAPARCFVDRTEDLRRMSAGRARAAAEGDPVWVVISGPPGVGKTAMAVRWIRSVEADYPDGQIHVDLHGDTARTAERPQEVLSRLLREVGAGPASLDVHEAAARWRSATAGMRLAVLLDNARSAAQVEPLLMSGPGTLTVITSRWRLTELAVAGAELHQLGPLDDAYAHEPAALRTDPLTPLAVTQEHPVTQALDQALSALDGDDARLYLLAGLLPPQVPLEPRLAAALTGFPLGKAAAGLERLADAHLLRPRAHDTYQMHDLVRDHAARRAQQQIRQPDRVLRRAFDYHLGHVAAAERLLCPTRPPQQRDRSWPEHLPAPQFAGERAALGWLHERSPGLMALLREAQAQGWNDAGWQLVDGLWPLWHRLHDLESWVAAHRIGLELARASGRPAAVRRMLTSGAAGLTAAAHYAEAGQWYAQARGLAAEAGDLRDEGQALLGLGAVAFEAGRPADGAPALHQAIKAWMRIGYRRGVALALVLLGEISLTQKDVSQARTHFRAAYHVFEKHVDDPFDHSRTRCFLAYTHFLTTPPEIDNGMALLDESIDYFTSEGRTYWYGRALEMKAHGAQAAGDTARARAFAEQALEAWHGRNVKDIPRVTAWLNNLPTP
>NZ_CP048875.1|WP_037614126.1|1300666_1301677_-|CPBP-family-intramembrane-metalloprotease
MNICCTVLGLYLLAAGVKLWQNVVAFADLCGLRVPDAQLVTEIGKGLTVASVAVTALWLFRLLDPPRRGSERRARRRVLAADLAAVLAVLAGLGLLVPALHAEAVGMAFQTVLLVWLAVVLVARSGVRPGDLGLPTRWRPRAPRTVSVLIGLAASAALVLAVFLLIVLATLPGPQGGQPPAEGLTELVDSVRSAVIEELVVSAAVIMLLTRAGIRPATCVLVSALMRALPHVYLGWQALAVLPLGLALGFLFVRYRRVMPLIAAHAARNTMVFLPGWALVALPVMTLLAVVGTLAALALVVRGPRADDWPPGSRGGTEASSRPTASRPNQPAQNRK
>NZ_CP048875.1|WP_158718293.1|1301697_1302069_-|hypothetical-protein
MAVQALDELSPALVGAVFSIQGRWGFFVPEESAEPPWPAGTRYLKAGAALTLPPACWKNATSSDAGWVRRPPDGRLLTPPLILHPMVTAASHREKQDSQRPVGEQPARESQPCSSHSTSESPS
>NZ_CP048875.1|WP_164439312.1|1302203_1303175_-|winged-helix-turn-helix-transcriptional-regulator
MCTHAPPCPSADSPDREAAHPLAHHPQQGWSLLCNGVLLFEDTGGLLPDGRITAPRKPTAPSATAGRKKSEPDYDALLNVIRSVTKTYYPNTPHTWERGADRLHAAADELLPHARAHAGNAAHRHLDHAIPALEATLRSRPRPAGIEHVMVLAGQLRTLIRLLQQDPGTDVAEAISRTIALGKQGYAPGDIVTKDQLSKDFAAPHPLIDRAVSLLVDQGSLEVTGKRRLRVPVPGEPYRRLPEHIAHHLRERIVSGTYRDGQTLPSRRSLGTEFGCSPTVVSQALACLRAEGLVAWARGRPVTVIRPRRPLPAAHERPFPAAS
>NZ_CP048875.1|WP_164439313.1|1303205_1304447_-|cytochrome-P450
MPVTAAAVIPSSSLDLFDDEVLRDPYEAHSTLREMGPAVYLHRHGVWALTRYEDVKAALKDTDTFSSVDGVALTDQANQRILAGTVLASDGMAHARLRRPLSHQLNPRAIQKLAGWIEEHAEKLVTAHVRAGRFDAVALARKLVADVVMELMGLPESTRDQLIEAAEHTFNCFGPDNPRHRHSAPAAAGVIEFLHTRVTRETVRPGSWTASIYQAADAGRITEADVVPLMSAYVAAGMDTTIFAISTAMLLLARHPQQWRNLRAGSVSAQAVFHETLRLESPVQGFGRRVTRATRIGNTKIKAGEQVWLLYGAANRDPRKWGPSADEFSPARPDAEDQLALGAGPHLCAGNHLAALETRSLLTALTRHCTRLEVDGHPQPMLNNTLRGYTSIPLRATPCHPQTPTPHPPAPAA
>NZ_CP048875.1|WP_031031912.1|1304462_1305020_-|ATP-binding-protein
MPSNPDSVKILVAGGFGVGKTTFVGSVSEIEPLSTEARLTQASEPVDDISQVGAKTTTTVALDFGRRTFDGLVLYLFGTPGQDRFWFMWDDLVRGAIGAVVLVDTRRITDSFASVDFFEQRGVPFLVGVNQFDGAYTYSAGDIREALGLAPTVPVVHLDARDPRSSRDALVALIDARLHRTVVPA
>NZ_CP048875.1|WP_031031914.1|1305009_1305375_-|DUF742-domain-containing-protein
MSAQPSAHGRRSRPWAATGGRIQAMTTGSDITLDTHVTATRPGAPPAGSSYLRIVELCRTSRAVAELAAELGVPVGIAGAMVARLRDDGQVETRAPLDLTHDGVVTDALLRRVRDGLLHAI
>NZ_CP048875.1|WP_031031917.1|1305371_1305779_-|hypothetical-protein
MSTKNTEIQQLLDTHVNKIAGVRGAVVLSDEGNHMYWSAVDEGTAERRAPLASALGNLANRYAAEESGGAVRRVLIEMGDGFVSVSRVGSLAYLALSISPTADLSTVGYEAGLLTKRLAHVLDASLRVPEDGGTA
>NZ_CP048875.1|WP_037614127.1|1305775_1308004_-|hypothetical-protein
MLVATVAITALLGFVAVDAWGDWQQQTRLRNDSATGELGGEASLPLFVGAQQERRLTAAFLARPTAAAKARLDEQRAATDKGVASFRHLSGSKLETERRHKWEYVERVYTKLGGLEENRRAVDARSGDPDEATGYYTGLLATMVEFYQALSAMDDAQLTQETRPLVGLFWASEGASQEDALVAQARAAGRMSAEDRRAFAAAYGSQRVMYRRWIAPYLPPKDKRTYEDIVSSKSWRAVQRIESDLISAPATGGAIEALPRSVGQWDRAFGQVAKQTAGLNLSRTQGLLAHGYQRADEIRSEVFLKLGISLAIVIALAVLIFGIVRSVTRRLRDLQRRAEETATRLPAVVERLQAGRSVDAHQEFPRPHAGRADEFTGLEEALASAQHTAVRVAGNQAADRRGFAGFVSRTSTRALNLVGVQLDRLAELEAKYGQRPEDAPVLEDLISVDHPGVAVRRHLDNLQTLAGGHTEPYTEPKALADIVHDAAAETDAPERVTNKVRAQVWIGPRAVNGLIHVVAALLDNALAYSRSAVTVTSVTPVHGVALQIEDMGTGMRDEEYEEANAKLSTPPTFESMALHEDGRLGLFVVGHLARRHGLRVRLRPSDYGGTTAVVMIPHTIQCPEPAAAHPDATPAPLPADRREPLPVRTAPPLPPQDPRPEPAPALPSPGGPDTDPSAPSLPKRRPQTHLAPQLAQPPAPTPAYDPERDISPEEIGATWGAWQSANRAADSAHHEDMKDDKR

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Crispr_ID: NZ_CP048875_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_6

2030177-2030268

Orphan

Consensus_repeat	Method
GCGGGCCCCACCGTGTGCGCCCCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048875_6

>merge|NZ_CP048875|6|2030177-2030268|CRISPRCasFinder
GCGGGCCCCACCGTGTGCGCCCCGGCGCCGGACGGCGGAGCGGCCGTGGGAGCCCCAGGAACGGGCGCGGGCCCCACGGTGTGCGCCCCGGC

>NZ_CP048875|6|6|2030177-2030268|CRISPRCasFinder
GCGGGCCCCACCGTGTGCGCCCCGGC	GCCGGACGGCGGAGCGGCCGTGGGAGCCCCAGGAACGGGC
GCGGGCCCCACGGTGTGCGCCCCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_016468141.1\|2018826_2019435_+\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|235662
NZ_CP048875.1\|WP_016468159.1\|2037854_2038625_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP048875.1\|WP_016468148.1\|2026017_2027130_-\|FAD-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|223727
NZ_CP048875.1\|WP_016468143.1\|2020932_2021415_+\|cobalamin-biosynthesis-protein	unknown	unknown	gnl\|CDD\|376648
NZ_CP048875.1\|WP_030408672.1\|2027240_2027654_-\|DUF1992-domain-containing-protein	unknown	unknown	gnl\|CDD\|378159
NZ_CP048875.1\|WP_016468155.1\|2033621_2034890_+\|diaminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236437
NZ_CP048875.1\|WP_016468154.1\|2033016_2033532_+\|diaminobutyrate-acetyltransferase	unknown	unknown	gnl\|CDD\|131459
NZ_CP048875.1\|WP_016468142.1\|2019463_2020936_+\|cobyrinate-a,c-diamide-synthase	unknown	unknown	gnl\|CDD\|234896
NZ_CP048875.1\|WP_016468162.1\|2041295_2041952_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP048875.1\|WP_106963612.1\|2028538_2029153_-\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016468146.1\|2022599_2023913_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP048875.1\|WP_016468153.1\|2031264_2032365_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238624
NZ_CP048875.1\|WP_016468150.1\|2027695_2028433_-\|DsbA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|239322
NZ_CP048875.1\|WP_016468157.1\|2035500_2036400_+\|ectoine-hydroxylase	unknown	unknown	gnl\|CDD\|131461
NZ_CP048875.1\|WP_135566623.1\|2038768_2039992_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP048875.1\|WP_016468156.1\|2034970_2035375_+\|ectoine-synthase	unknown	unknown	gnl\|CDD\|183953
NZ_CP048875.1\|WP_016468158.1\|2036576_2037641_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_CP048875.1\|WP_158724365.1\|2024193_2025960_+\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|99781
NZ_CP048875.1\|WP_016468144.1\|2021411_2022491_+\|threonine-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|236128
NZ_CP048875.1\|WP_164440295.1\|2041997_2042918_-\|TIGR03564-family-F420-dependent-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274651

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_016468141.1\|2018826_2019435_+\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|235662	PRK05986, PRK05986, cob(I)yrinic acid a,c-diamide adenosyltransferase.	1.2873e-110
NZ_CP048875.1\|WP_016468159.1\|2037854_2038625_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.99918e-67
NZ_CP048875.1\|WP_016468148.1\|2026017_2027130_-\|FAD-dependent-monooxygenase	gnl\|CDD\|223727	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].	8.91221e-29
NZ_CP048875.1\|WP_030408672.1\|2027240_2027654_-\|DUF1992-domain-containing-protein	gnl\|CDD\|378159	pfam09350, DUF1992, Domain of unknown function (DUF1992). This family of proteins are functionally uncharacterized.	2.56527e-20
NZ_CP048875.1\|WP_016468155.1\|2033621_2034890_+\|diaminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236437	PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP048875.1\|WP_016468154.1\|2033016_2033532_+\|diaminobutyrate-acetyltransferase	gnl\|CDD\|131459	TIGR02406, L-24-diaminobutyric_acid_acetyltransferase, diaminobutyrate acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase. [Cellular processes, Adaptations to atypical conditions].	5.96653e-74
NZ_CP048875.1\|WP_016468142.1\|2019463_2020936_+\|cobyrinate-a,c-diamide-synthase	gnl\|CDD\|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	0
NZ_CP048875.1\|WP_016468162.1\|2041295_2041952_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.80455e-66
NZ_CP048875.1\|WP_016468143.1\|2020932_2021415_+\|cobalamin-biosynthesis-protein	gnl\|CDD\|376648	pfam01890, CbiG_C, Cobalamin synthesis G C-terminus. Members of this family are involved in cobalamin synthesis. The protein encoded by Synechocystis sp.cbiH represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyze adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyzes a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process. Within the cobalamin synthesis pathway CbiG catalyzes the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. This family is the C-terminal region, and the mid- and N-termival parts are conserved independently in other families.	1.13159e-29
NZ_CP048875.1\|WP_016468146.1\|2022599_2023913_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.5564e-08
NZ_CP048875.1\|WP_016468153.1\|2031264_2032365_-\|amidohydrolase-family-protein	gnl\|CDD\|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	2.193e-58
NZ_CP048875.1\|WP_016468150.1\|2027695_2028433_-\|DsbA-family-oxidoreductase	gnl\|CDD\|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	7.21385e-75
NZ_CP048875.1\|WP_016468157.1\|2035500_2036400_+\|ectoine-hydroxylase	gnl\|CDD\|131461	TIGR02408, putative_L-proline_4-hydroxylase, ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.	1.34513e-176
NZ_CP048875.1\|WP_135566623.1\|2038768_2039992_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	0.000668479
NZ_CP048875.1\|WP_016468156.1\|2034970_2035375_+\|ectoine-synthase	gnl\|CDD\|183953	PRK13290, ectC, L-ectoine synthase; Reviewed.	1.33996e-79
NZ_CP048875.1\|WP_016468158.1\|2036576_2037641_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	6.11945e-38
NZ_CP048875.1\|WP_158724365.1\|2024193_2025960_+\|MOSC-domain-containing-protein	gnl\|CDD\|99781	cd06184, flavohem_like_fad_nad_binding, FAD_NAD(P)H binding domain of flavohemoglobin. Flavohemoglobins have a globin domain containing a B-type heme fused with a ferredoxin reductase-like FAD/NAD-binding domain. Flavohemoglobins detoxify nitric oxide (NO) via an NO dioxygenase reaction. The hemoglobin domain adopts a globin fold with an embedded heme molecule. Flavohemoglobins also have a C-terminal reductase domain with bindiing sites for FAD and NAD(P)H. This domain catalyzes the conversion of NO + O2 + NAD(P)H to NO3- + NAD(P)+. Instead of the oxygen transport function of hemoglobins, flavohemoglobins seem to act in NO dioxygenation and NO signalling.	4.51986e-54
NZ_CP048875.1\|WP_016468144.1\|2021411_2022491_+\|threonine-phosphate-decarboxylase	gnl\|CDD\|236128	PRK07908, PRK07908, threonine-phosphate decarboxylase.	4.32582e-142
NZ_CP048875.1\|WP_164440295.1\|2041997_2042918_-\|TIGR03564-family-F420-dependent-LLM-class-oxidoreductase	gnl\|CDD\|274651	TIGR03564, F420_MSMEG_4879, F420-dependent oxidoreductase, MSMEG_4879 family. Coenzyme F420 is produced by methanogenic archaea, a number of the Actinomycetes (including Mycobacterium tuberculosis), and rare members of other lineages. The resulting information-rich phylogenetic profile identifies candidate F420-dependent oxidoreductases within the family of luciferase-like enzymes (pfam00296), where the species range for the subfamily encompasses many F420-positive genomes without straying beyond. This family is uncharacterized, and named for member MSMEG_4879 from Mycobacterium smegmatis. [Unknown function, Enzymes of unknown specificity].	3.45015e-99

>NZ_CP048875.1|WP_106963612.1|2028538_2029153_-|DNA-binding-protein
MDEDMLWPKVVQERVKAGHDRELVHSYPYRSACPSTVWSELVEAASGEVFLAGYTNYFFWTQVPHFADTVRRKAHAGCRVRFLLGDPDGEVTRQREEIEDVALSVSTRIRITLEHLDRLGSLPGVETRVSAPPDAVNHVSLSVFRFDNEALVTPHLARLVGHDSPLLHLRRQGAGGMFDRFAEHAEELWSRALPCDPAASNESR
>NZ_CP048875.1|WP_016468150.1|2027695_2028433_-|DsbA-family-oxidoreductase
MRVEIWADIACPWCYIGKARFEKGLAAFAHRDEVEVVHRSFELDPNADGPGGEPVVRHLADKYGLSPQEAQAAEARVAEAAHGEGLGYELGRLTAGSTFGLHRLLHHAKEQGTAVHSALLDAFYRANFADLLPLGDAETVVAVATGAGLDEAEVRRVLADPDAYAAQVRADEREAASLGATGVPFFVLDRRFGVSGGQPAEVFTRALEQAYAAAGGLVQVAGATAGHEDAPVCADGSCEVPAHRH
>NZ_CP048875.1|WP_030408672.1|2027240_2027654_-|DUF1992-domain-containing-protein
MTERKPPGVGFETWADRQIREAEERGEFANLPGAGKPLPDLDAPYTEQWWVERKMRDENLSYLPPSLVLRKDAQEAEERAARARSEAEVRAILTDINVRIEEAVRTPPEGPPHRLVPFDVERAVRRWRAERSHRDSR
>NZ_CP048875.1|WP_016468148.1|2026017_2027130_-|FAD-dependent-monooxygenase
MASPSHPRVAVVGAGLGGLVCARVLQRHGRPVTVFERDVSAGARPQGGSLDIHAGTGQAALRATGLLDRFRAVSRPESQGWRLLDPVTAAVLPVAGPPAHDDDSPEIDRGQLRGLLLDSLAEGTVRWGSAVAGVTPLPDGTWRLLLDDGSCEEADLVVGADGAWSRVRPALSDATPDYAGVTFVEAGFEDCEARHPEVAELVGEGTMLAGSGGKALLAQRNSKGHVRVYAAFRAPHDWHVAAGVDVGDTAAVRAHLLGVFEGWHESLLGLVRGNDGGFVSRPVFVLPVPHVWEHRSGITLLGDAAHLMPPVGLGANLAMLDGAELAEALVAGSTVEDAVRAYEEVMLSRSAQAARDCAALLDDLLPSDAA
>NZ_CP048875.1|WP_158724365.1|2024193_2025960_+|MOSC-domain-containing-protein
MPQLARIARIVRHPVKGLPGHDLDRARLSPGRGVPGDRVFAFARRPVPAGGGWASTRHFHTLCAAPDPADGRVRIDEDAREATLTHPVWSGLTVPLDPPSPGKVADTDWFGGAELHRAREGYCDDRGTVSLVNLASVEALAETVGRPVDPLRFRANLLLAGLPAWAELDLPGARLTVGDAELEVLHPINRCAATSVVPGRAHRDLNVPAELATRFGHLYCGLRARVVRAGTVRGGDPVELTGRGRPTPLHGGPGPRSWPRRARVDERVPHGDGAVSLWLTDPLAGERDAPRPGQHVVVTAHTPDGPLWRAYTVSAHDADRLRITVKREPSGRMSSYLHSHARPGTLLTLSGPHGGTVLDDEPGRPLLLASAGIGITQTVALLRGCAAEQPARRVEVVHTARRPDDLALWPEVLALAERLPHARTRLHLTRTGDREAAEWHAERGRPVLDDADPAATAFLCGPPSFLETARRALTTAGIPAERVHQEVFVSPGSSGITPQEPPEGPFKVSFSTSGRVARWQPADGSLSELAEAQGLTVPSGCRAGACRSCARPLRGGRVVYPTPPALPPDPGTALLCVAVPAEDTDIDL
>NZ_CP048875.1|WP_016468146.1|2022599_2023913_+|alpha/beta-fold-hydrolase
MPATLRHPGTVLRDHVFAVPLDHDRPDGEQIEVYAREVVAAGHEDDRLPWLLFLQGGPGSGGPRPVGRSDWLEVALRHYRVLLLDQRGTGRSTPANRQTLAARGTPEQQAAYLAHFRADAIVRDAELVRERLLGEDGCWSTLGQSFGGFCTLAYLSLAPGHLREAFVTGGLPGLRVSADEVYRAAYPRVAAKNAAHYERYAQDVGTVRRIAEHLAEHDVRLPDGSRLTVERFQFLGMLLGQGSGSHTLHYLLEDPFVRTPQGPRLSDTFLEGVRAQVSLAANPLFAALHEPIYAQRSVSGEGTRWAAQRVRGEFPAFDAARALEGDGPVLFTGEMIYPWMFDLDPALVPLREAAHLLAERGDWPDLYDTERLAANEVPVYAAVYHDDMYVDRDHSLATARAVPGVRTWITNEWEHDALRVSRGAVLERLIGMARGEV
>NZ_CP048875.1|WP_016468144.1|2021411_2022491_+|threonine-phosphate-decarboxylase
MTTFADTGLRHHGDAEVRGAGAGLTDLAVNVRTGTPPAWLRQRLAASLETLAAYPDGAPARHAVAVRHGLADDQVLLTAGAAEAFVLLARALPARCPVVVHPQFTEPEAALRDAGHRVRRVLLRPQDAFRLDPAAVPDAADLVVVGNPTNPTSVLHPAAGLARLAREGRTLVVDEAFVDAVPGERESLVPLLGTLPGRTVVLRSLTKTWGLAGLRVGYVLSDPETVRTLARHQPLWPVSAPALTAAEACSTPGALAEAEEAARRFARDRDHLRARLAGLREAGIGEATPCPQGPFLLVRHPRGAAVRERLRELGFAVRRGDTFPGLGTEWFRMAVRDPATSDRFAAALESALASLPDAS
>NZ_CP048875.1|WP_016468143.1|2020932_2021415_+|cobalamin-biosynthesis-protein
MRPDGTHPGPRPGPRLVTVGIGSCAGVTAEEVHGLVTAVLATAGLAPGDVTALATVLARAAEPGLLAVSRRLALPLLAYDARALARVRVPHPSGFARTAVGTPSVAEAAALLAGGGGPGSLVQGGAPALLVPKTTSRPGDGVPARATAAVAALTVPGSDT
>NZ_CP048875.1|WP_016468142.1|2019463_2020936_+|cobyrinate-a,c-diamide-synthase
MIRVPRLVVAAPSSGSGKTTVATGLMAAFAGRGLAVSPHKVGPDYIDPGYHALATGRPGRNLDAYLCGPERIAPLFGHGAAGADLAVVEGVMGLYDGAAGQGELASTAHVAKLLRAPVVLVVDASSQSRSVAALVHGFAAWDPGVRVAGVILNKVGSDRHEELLREALEGSGVPVLGVLRRTKVVRAPSRHLGLVPVAERRAEAVESVAALAGRVREGCDLDALLALARSAPPLPDEPWDAVRELAAEPVGRRPRVAVAGGAAFTFSYAEHTELLRAAGAEVVPFDPLRDEALPHGTAGLVVGGGFPEVYAPELSENRPLRQQIAAFGGPVAAECAGLLYLARELDGAPMCGVLDARARMAERLTLGYREAVAVTDNVLAPAGTRVRGHEFHRTELVPGAGPEPAWGLVAPERRAEGFAQHQVHASYLHVHWAAAPAMAARFVAGCARRWEAGGTGEAAGTGEAGGTGKAADVAKAGGTGEGVGSTRSTA
>NZ_CP048875.1|WP_016468141.1|2018826_2019435_+|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MPKGQPSVVPQDGLTTRQRRNRPLVAVHTGTGKGKSTAAFGMALRAWNQGWPVGVFQFVKSAKWKVGEERALKVLGDTGEGGTVTWHKMGEGWSWLKRNVQDAELSNEAAAREGWEQVKRDLAAETYRLLVLDEFAYPLHWGWVDVAEVVEVLRERPGTQHVVVTGRNAPQELIDAADLVTDFSKVKHPMDAGQKGQKGIEW
>NZ_CP048875.1|WP_016468153.1|2031264_2032365_-|amidohydrolase-family-protein
MSERASLHIKGRVLVGPEEVRDELWVVDGRVTYQPPRSPAVHADPPTLEGWVLPGLVDAHCHVGLDAHGPVDAGTSEKQALTDRDAGALLLRDAGSPSDTRWIDDRDDLPRIIRAGRHIARTRRYIRNYAHEIEPGDLAAYVRREARRGDGWVKLVGDWIDRAEGDLSPCWPRWAIEEAITAAHEEGARVTAHCFAENSLRDLVEAGIDCIEHATGLTEETIPLFAERGVAIVPTLVNIATFPTLAAGGEKKYPRWAAHMRDLHARRYDTVRAAWEAGIPVFTGTDAGGSLAHGLVGQEVAELAAAGIPARDALSAAVWHARDWLGRPGLTEGAPADLVVYAADPRDDLRVLTAPRHVVLRGQVVR
>NZ_CP048875.1|WP_016468154.1|2033016_2033532_+|diaminobutyrate-acetyltransferase
MPEGLKLDTPRVDDGAAIWRIARDSKTLDLNSSYSYLLWCRDFAATSVVARDGSGEPVGFITGYLRPERPRTLLVWQVAVDEAARGRGLAAAMLDGLTLRVAEEHGIDSIETTVTPDNTPSNRLFASYAQRHSAAVAKDVLFDAGLFPEDGHLPEVLYRIGPVVFPGASKR
>NZ_CP048875.1|WP_016468155.1|2033621_2034890_+|diaminobutyrate--2-oxoglutarate-transaminase
MTITQPDLSVFETVESEVRSYCRGWPTVFDRAQGAHMYDEDGHTYLDFFAGAGTLNYGHNNPVLKRALLDYLERDGVTHGLDMSTVAKRSFLETFQELVLAPRGLDHKVMFPGPTGTNAVEAALKLARKVKGRESIVSFTNAFHGMSLGSLAVTGNAFKRAGAGIPLVHGTPMPFDDYLNGATEDFVWFERLLVDQGSGLNKPAAVIVETVQGEGGINVARAEWLRALADLCKRHDMLLIVDDIQMGCGRTGAFFSFEEAGIKPDIITLSKSIGGYGLPLALTLFKPELDIWEPGEHNGTFRGNNPAFVTATAALQTYWADGQMEKQILSRGEQVEAALKAIAEEHADEVADYRGRGLVWGLEFHNKNRANAVARRAFELGLLIETSGPESEVVKLLPALTTTPDELDEGLRILARAVRETA
>NZ_CP048875.1|WP_016468156.1|2034970_2035375_+|ectoine-synthase
MIVRSFKDIENTDRHIKAKSGTWESKRIVLAKEKVGFSLHETILYAGTETSMWYANHIEAVLCVEGEAELTNDETGEKHWITPGTMYLLDGHEKHTMRPKTDFRCVCVFNPPVTGREDHDENGVYPLLTEPDED
>NZ_CP048875.1|WP_016468157.1|2035500_2036400_+|ectoine-hydroxylase
MTTAPERTADLYPTRGTTEVATPRMDPVVWSEPGAPGPIEAPDLAAYERDGFLAIDQLIGPDEVDKLRAELNRLTSDPVIRADERSIVEPKSQEIRSVFEVHKISEVFAGLVRDPRIVGRARQILGSDVYVHQSRINVKPGFGATGFYWHSDFETWHAEDGLPRMRTVSVSIALTENYETNGGLMIMPGSHKTFLGCAGETPKDNYKKSLQMQDAGTPSDEALTKFADAHGIKLFTGKPGSATWFDCNCMHGSGDNITPYPRSNVFIVFNSVENEAVEPFAAPVRRPEFIGARDFTPVK
>NZ_CP048875.1|WP_016468158.1|2036576_2037641_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MGHRLLAAEFTPEVCYLNTASHGLLPARTVAAVTQAATEMAAGHIDQVAYYAAVDAARAAFARIVGTTPDRVAAGSAVSVHIGLIAASLPAGATVLAPEGEFSSVVNPFTVRDDLTLRTVPLDELAGAVDETTALVAVSAVQSRDGRIADLAAVREAARAVGARTLVDVTQSAGWLPFSADEHDYVVCGAYKWLLCPRGTSFLVVSGEAQEAGALRPLHAGWVAGASPWDDCYGPIARLDPDARAFEQPAPFLPYLGAAQSLALIEELGGPETIGAHDRALAARFRKGVTELGLGHEPVPGDSAIVAVPGLGELSERLTAGGVSLSVRDGNLRAAFHLYNTEEDVDLLLSLLEG
>NZ_CP048875.1|WP_016468159.1|2037854_2038625_+|IclR-family-transcriptional-regulator
MSGTEAQGAQVKSAVRTVELLEFFAHRPGMHTLAGVQEAVGYPKSSLYMLLRTLTDLGWVETDATGTRYGIGVRALLVGSSYIDSDEVVTAARPVLDRLAEETTETIHLARLDGTDVVYLATRQSQHYLRPFARVGRRLPAHSTSLGKALLAARSDEEVRAMLPPHPARVTDNTLTDREALIEELHLVREQGYAVDREENTLGLRCFGIALPYRTPARDAISCSVPAARLTPAHEQRIKTALFDARDRLAHATRAL
>NZ_CP048875.1|WP_135566623.1|2038768_2039992_+|hypothetical-protein
MDDMDDMDRARAALAAGAVTACLPYLTLKLNWLAGGHLGIPEGSPLRDGGAALWSVNALTVAMDATVLLLVLALVRPFGQRLPGLLLALPLWGAAGLLGPIAVAFPLQAVTGVLRSGGGSGDGDPGRLLEGWVWTLVYTGFTLQALALGGLFALYVRRRWGALLRSPLRTGATEGAAAWAAFAVAVLAVLPAAVSHTDFALDSGGAGDRRIVEATFAAYTVLAVLGTARLLHGGTPRRSRARLWPTLITAGTASAVLACWGGWLLLGSLSGGGRTVGQHDDRAAEWTYAAQLLAGLLFTALLARALRRRAAVRSARLRAAASRAVVHRADAPRPATGRTGSPRPVTRQAGVPEAATHRAATPPAPTHQADAPRAGTAQAATTPRAAAGRAGGAGGGPQPGGTPASRR
>NZ_CP048875.1|WP_016468162.1|2041295_2041952_+|response-regulator-transcription-factor
MTPALRVVLADDEQMVRTALRAILAGEPDIEVAGEAADGDEAVSVVRRLRPDVVLMDVRMPRVDGIRATEHLLAAQGEAAPRILILTTFENDAYVYDALRAGAHGFLLKRATADELIAGVRVVARGDSLLFPSAVRALAARHAGGRRARELTARLTGREVAVLRLMARGLTNAEIADRCGVSTATAKTHVAAVLGKLGARDRTQAVILAYEHGVVAPG
>NZ_CP048875.1|WP_164440295.1|2041997_2042918_-|TIGR03564-family-F420-dependent-LLM-class-oxidoreductase
MFLGGAFAQAPGTVNLVDSAVDLAHEVADAGVRTVWFGQASDYDAPQLAALVGRAEPRVHVGTSVVPMYPRHPLLLASAAKTAQAATAGRFRLGVGLGARNVLEPQFGLAYPPQIRHLREYLTALRPLLDGEDTVFEGETLTSRPVGSTAVAGASPAIPVLVAAMGPRALAAAGELADGTLPFLAGPRTLAERIVPAVTEAAAAAGRPAPQIVAGVPAVVTDDVATARDRVSAALGFYDSISSYRKVVAAEGLSQAADLLVAGDEETVTTGLRRYLDAGATEIMLTHTDLFGQEERVRTWNVARRL

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Crispr_ID: NZ_CP048875_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_7

2821955-2822229

TypeI-E

I-E

Consensus_repeat	Method
CGGGACCATCCCCGCACGTGCGGGGAGCAC	CRISPRCasFinder
CGGGACCATCCCCGCACGTGCGGGGAGCAC	CRT
CGGGACCATCCCCGCACGTGCGGGGAGCAC	PILER-CR

4 spacers

cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

The CRISPR arrays of NZ_CP048875_7

>merge|NZ_CP048875|7|2821955-2822229|CRISPRCasFinder,CRT,PILER-CR
GGGGACCATCCCCGCAGGTGCGGGGAGCACTCGCAGCAGCCGGCGCCCACCGCGCTGCGGCCGGGACCATCCCCGCACGTGCGGGGAGCACTCATGATGCCGAACCGGCTGCTGAGCACGAGGCGGGACCATCCCCGCACGTGCGGGGAGCACGACACGGTGACCGGGGAGACGGTCCCGGTGCCGGGACCATCCCCGCACGTGCGGGGAGCACTCCTGGATCGACCCGCAGAAGGCCCGCATCCCGGGACCATCCCCGCACGTGCGGGGAGCAC

>NZ_CP048875|7|7|2821955-2822229|CRISPRCasFinder
GGGGACCATCCCCGCAGGTGCGGGGAGCAC	TCGCAGCAGCCGGCGCCCACCGCGCTGCGGC
CGGGACCATCCCCGCACGTGCGGGGAGCAC	TCATGATGCCGAACCGGCTGCTGAGCACGAGG
CGGGACCATCCCCGCACGTGCGGGGAGCAC	GACACGGTGACCGGGGAGACGGTCCCGGTGC
CGGGACCATCCCCGCACGTGCGGGGAGCAC	TCCTGGATCGACCCGCAGAAGGCCCGCATCC
CGGGACCATCCCCGCACGTGCGGGGAGCAC

>NZ_CP048875|7|3|2821955-2822229|CRT
GGGGACCATCCCCGCAGGTGCGGGGAGCAC	TCGCAGCAGCCGGCGCCCACCGCGCTGCGGC
CGGGACCATCCCCGCACGTGCGGGGAGCAC	TCATGATGCCGAACCGGCTGCTGAGCACGAGG
CGGGACCATCCCCGCACGTGCGGGGAGCAC	GACACGGTGACCGGGGAGACGGTCCCGGTGC
CGGGACCATCCCCGCACGTGCGGGGAGCAC	TCCTGGATCGACCCGCAGAAGGCCCGCATCC
CGGGACCATCCCCGCACGTGCGGGGAGCAC

>NZ_CP048875|7|3|2821956-2822229|PILER-CR
GGGACCATCCCCGCAGGTGCGGGGAGCACT	CGCAGCAGCCGGCGCCCACCGCGCTGCGGCC
GGGACCATCCCCGCACGTGCGGGGAGCACT	CATGATGCCGAACCGGCTGCTGAGCACGAGGC
GGGACCATCCCCGCACGTGCGGGGAGCACG	ACACGGTGACCGGGGAGACGGTCCCGGTGCC
GGGACCATCCCCGCACGTGCGGGGAGCACT	CCTGGATCGACCCGCAGAAGGCCCGCATCCC
GGGACCATCCCCGCACGTGCGGGGAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_016468822.1\|2819720_2820710_+\|DNA-polymerase-LigD,-polymerase-domain-containing-protein	unknown	unknown	gnl\|CDD\|240133
NZ_CP048875.1\|WP_078616187.1\|2816915_2818001_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_CP048875.1\|WP_051803282.1\|2833907_2834444_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_037611309.1\|2831319_2831673_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_CP048875.1\|WP_016468823.1\|2820916_2821204_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_030406553.1\|2834690_2835224_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016468818.1\|2816348_2816780_-\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_CP048875.1\|WP_016468816.1\|2814472_2814967_-\|DUF3145-domain-containing-protein	unknown	unknown	gnl\|CDD\|378644
NZ_CP048875.1\|WP_016468820.1\|2818051_2818522_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP048875.1\|WP_164440309.1\|2825426_2827007_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP048875.1\|WP_016468821.1\|2818655_2819690_-\|Ku-protein	unknown	unknown	gnl\|CDD\|238408
NZ_CP048875.1\|WP_164439498.1\|2830360_2831323_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP048875.1\|WP_031174966.1\|2835276_2836476_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224090
NZ_CP048875.1\|WP_031174959.1\|2815272_2816241_+\|lipoprotein	unknown	unknown	gnl\|CDD\|238870
NZ_CP048875.1\|WP_031025701.1\|2828882_2829614_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP048875.1\|WP_164439497.1\|2827003_2827669_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP048875.1\|WP_164440310.1\|2829628_2830354_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_CP048875.1\|WP_016468814.1\|2812150_2813416_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	unknown	unknown	gnl\|CDD\|238430
NZ_CP048875.1\|WP_031174958.1\|2813484_2814399_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NZ_CP048875.1\|WP_031025699.1\|2827665_2828886_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_016468820.1\|2818051_2818522_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.49006e-18
NZ_CP048875.1\|WP_016468822.1\|2819720_2820710_+\|DNA-polymerase-LigD,-polymerase-domain-containing-protein	gnl\|CDD\|240133	cd04863, MtLigD_Pol_like, MtLigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Mycobacterium tuberculosis (Mt)LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. MtLigD is monomeric and contains an N-terminal Pol domain, a central phosphoesterase module, and a C-terminal ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The MtLigD Pol domain is stimulated by manganese, is error-prone, and prefers adding rNTPs to dNTPs in vitro. The MtLigD Pol domain has been shown to prefer DNA gapped substrates containing a 5'-phosphate group at the gap.	9.27574e-107
NZ_CP048875.1\|WP_078616187.1\|2816915_2818001_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	0
NZ_CP048875.1\|WP_037611309.1\|2831319_2831673_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	1.4959e-44
NZ_CP048875.1\|WP_016468821.1\|2818655_2819690_-\|Ku-protein	gnl\|CDD\|238408	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku. The alignment includes the core domain shared by the prokaryotic YkoV-like proteins and the eukaryotic Ku70 and Ku80. The prokaryotic Ku homologs are predicted to form homodimers. It is proposed that the Ku homologs are functionally associated with ATP-dependent DNA ligase and the eukaryotic-type primase, probably as components of a double-strand break repair system.	1.99901e-109
NZ_CP048875.1\|WP_016468816.1\|2814472_2814967_-\|DUF3145-domain-containing-protein	gnl\|CDD\|378644	pfam11343, DUF3145, Protein of unknown function (DUF3145). This family of proteins with unknown function appear to be restricted to Actinobacteria.	2.73166e-95
NZ_CP048875.1\|WP_164439497.1\|2827003_2827669_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	5.17709e-32
NZ_CP048875.1\|WP_164440309.1\|2825426_2827007_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	2.49637e-129
NZ_CP048875.1\|WP_016468818.1\|2816348_2816780_-\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	1.50566e-73
NZ_CP048875.1\|WP_164439498.1\|2830360_2831323_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.22615e-118
NZ_CP048875.1\|WP_031174966.1\|2835276_2836476_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	2.09472e-143
NZ_CP048875.1\|WP_031174959.1\|2815272_2816241_+\|lipoprotein	gnl\|CDD\|238870	cd01832, SGNH_hydrolase_like_1, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.	4.00986e-29
NZ_CP048875.1\|WP_031025701.1\|2828882_2829614_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.74434e-44
NZ_CP048875.1\|WP_164440310.1\|2829628_2830354_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.20173e-78
NZ_CP048875.1\|WP_016468814.1\|2812150_2813416_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	gnl\|CDD\|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	0
NZ_CP048875.1\|WP_031174958.1\|2813484_2814399_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	4.76347e-41
NZ_CP048875.1\|WP_031025699.1\|2827665_2828886_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.87518e-160

>NZ_CP048875.1|WP_016468823.1|2820916_2821204_-|hypothetical-protein
MRYRLTFVSGLAIGYVLGARAGRERYEQLRKGMRRIAENPAVRNAGEAAALSGRQAAAKAADAVQDRLPSSLGDRVRTARDHRARSSSDWGAETH
>NZ_CP048875.1|WP_016468822.1|2819720_2820710_+|DNA-polymerase-LigD,-polymerase-domain-containing-protein
MPHTEIGGHRLSLSNLDKVLYPATGFTKGEAIHYYASVADAVLPHLDGRPLSFLRYPDGVEGEKFFTKHVPPGTPSWVTTRKISVVSKEPLHQVLIQDEATLVWAANLAALELHTPQWQADHQAKADRLVFDLDPGEGADILDCRTIADWLRERAAEDGITVLPKTSGSKGLHLVAPIERTPSDKVSAYAKKLAQEAEADMPDQAVSKMAKVLRGGKVFVDWSQNNQAKTTAAPYTLRAKEHPTVSTPVTWDELAAARKPRDLVFHAADLPARLEEHGDLLAPLLADDGNGRRTGGGTGAAGKRGKSGGDGKSKGKGTGRSATRGRIPE
>NZ_CP048875.1|WP_016468821.1|2818655_2819690_-|Ku-protein
MRSIWKGTISFGLVSIPIKVVAATENHSVSFHQVHTADGGRIRYRKVCELDEEEVPREEIGRGFETEEGRTILLTDDDMAALPLPTAKTVEILGFVPAEEIDPIQLDRSYYLAADGKRADKPYVLLREALKRSGKVAVAKLALRARESLGMLRVYEDALALHTMLWPDEIRAVSGVAPEGEVAVRDAELDLADTLMDTLGELDWSELHDEYREALEALVRAKAEGAEPAPEELRRRGEEGGGKLVDLMAVLERSVQEARSGRAAGEEGEATVHELAERRAGGKAPAKRAASKKAAKKPEAKKTAGKSTGGKAASKAAAPKKTAAKKTAAKKTSAKKPSRPRKTA
>NZ_CP048875.1|WP_016468820.1|2818051_2818522_+|MarR-family-transcriptional-regulator
MAADPRTPDALTVEVAELIGTVVARYHEEYELAAAEHALTGAQARVLALLAREPTPMRQLARQLKCEPSNMTGMVDRLEARGLVERRPDPADRRVKVAAATDEGEAVAARLRRELKFAGAPLQGLTPAERRLLRDLLRRMLGEPEESGEEPRPPRP
>NZ_CP048875.1|WP_078616187.1|2816915_2818001_-|NADP-dependent-oxidoreductase
MVVSAHETISGGRHVTASPHSGETQIPRTSRAWHLTARPKGWPEPDNFALREESVEEPADGQILVRNIHLSVDPYMRGRMSEAKSYVAPYKLNEPMYGGAVGVVLASRADGIAPGDHVLHDHGWREYATLPAGRVTKVDAQAAPLSTYLGVLGMPGLTAYAGLVRVAAFKPGDAVFVSGAAGAVGSEVGQIAKLKGASRVIGSAGSDEKVQLLLDEYGFDAAFNYKKGPVREQLKEAAPDGIDVYFDNVGGDHLEAAIGAMNLHGRIAVCGMISQYNATEPTPAPRNLSQIIAKRFRMEGLLVADHQDLQPQFVEEVSAWVRSGELKYRETVVEGVENTLDAFLGMLRGENVGKMIVTLGE
>NZ_CP048875.1|WP_016468818.1|2816348_2816780_-|organic-hydroperoxide-resistance-protein
MAIQPIDVKYTAVATAENGRDGRVASDDGQLDVVVNPPKAMGGSGAGTNPEQLFAAGYSACFQGALGVVARKEGADISGSTVTAEVGIGNTPEGGFGLTVALKARIPNVDEATAKDLLEKAHQVCPYSNATRGNIEVTLHVVA
>NZ_CP048875.1|WP_031174959.1|2815272_2816241_+|lipoprotein
MSQRNEPGNARPTRPRSSRPVRPRTAAICAFALVLVAGLVLAVACGGGSGGGDGSGAQRAESSARPHAKPAPRRIWDRSPSSLAAVGDSITRGFDACSLLADCTKVSWATGTADGVNSLARRLLSDPRGRSWNYAVSGAVMADLPQQMRRAAAHKPGMVTVMSGANDACRPTVATMTPVADFRASFREALRVLRAEAPKTQVYVSSVPNLERLWEQGRTNPIGQRVWGLGICQSMLKNPQSTAPADQERRQRVQQRVIAYNTVLKQECAKDLRCRYDNGAVFDYRFTPQELSNWDWFHPSQAGQRSLAELAYEQITRKRPAG
>NZ_CP048875.1|WP_016468816.1|2814472_2814967_-|DUF3145-domain-containing-protein
MTTRGVLYVHSAPRALCPHVEWAVAGVLGARVHLDWIRQPASPGTWRAEFSWQGDPGTASKLASALRGWHLLRFEVTAEPCATAEGERYSSTPDLGIFHAVTGMHGDILIPEDRLRAAVARAGRGESELEAEIAKLLGKPWDDELEPFRYAGEGAPVRWLHQVV
>NZ_CP048875.1|WP_031174958.1|2813484_2814399_-|NAD(P)-dependent-oxidoreductase
MPDETPHALPVAVLGTGTLGSAMARALSAAGLAVRAWNRTAQRARPLAGHGVAVAATPDEAVRGAGTVLTVLSDGPATLDVMRAAAPGLAEGTCWLQAGTVGPEGLVPLVDFAGERGLRLVETPVLATGIRAGRGELTMLAAGPGAVRERVAPVLDALGATRWLGEEPGAAGRLKLVADHWMLTLLNGTAETLALAEGLGVDPGTFLGAVAGGPLDATCLQTKARLVLEGAWEAAVPLAVARKDADLICRAARTAGVRLDAMPAVAERLRRAEAQGHGGDDAAASFYAAFAASDYGRGDARGSA
>NZ_CP048875.1|WP_016468814.1|2812150_2813416_+|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein
MNATNDSVVVTGIGATTPLGGDSASTWEGLVAGRSGVAALEEEWAEGLPVRIAARAAVEPGERIPRPQARKLDRSAQFALIAAREAWADAGFTARAGEDPTVDPDRLGTVVASGIGGVTTLLDQYDVLREKGVRRVSPHTVPMLMPNGPSANVGLEVNARAGVHTPVSACASGSEAVGYAIEMIRTGRADIVVAGGTEAAIHPLPVAAFANMMAMSKSNDDPQGASRPFDVDRNGFVLGEGAGVIVLESAEHARRRGARVYAEAVGQGISADSHDIVQPEPSGNGIAHALQNLIARTDLDPAEIMHINAHATSTPQGDLAELKALRKVFGDEMDHMGISATKSMTGHLLGGAGGVETVATLLALHHRTAPPTINIKTLDPEADGDIVRDAARALPAEGRIAALNNSFGFGGHNVVLAFRTV
>NZ_CP048875.1|WP_164440309.1|2825426_2827007_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MLDGREHLLSLREVFEQADGIRRLAGDIATQDFALTRLLLAILHDALEGPRDVDEWAELWEAEQPFGPIDGYLDEHRQRFDLLHPKTPFFQTPGLRTAKGEVFSLDRITADVPNGVRFFTMRALGAERLSFAEAARWVVHAQTYDTSGIKTGVEGDPRAKNGKVYPQGVAWSGSLGGVLAEGDTLRRTLLLNLVAAEADVVTVSDEDKPAWCRPAPEPGPAKDVAERPYGPCDLYTWQSRRLLLHHDEDGVHAVVLTYGDPLAPQNRHKAEPMTGWRRSKPQEKKLGQPLVYMPREHDPARSAWRGLASLLAPRALSTASARDAANELRPGVVHWLAQLMVDGVLPQETLIRLRTYGVKYGTQQSVIDEVTDDSVAMAVVLLHEDDSALGRTALDAVGDADASVRALGDLARDLALAAGSDPGTRQDSAREAGYDALDTAFRDWLSRIRPGDEPERIRTEWQRTVRRIVKDSAGVLISAAGEAAWAGRTVATKHGERHYDAALADRLFRIRLRKALPLAHDSEDPS
>NZ_CP048875.1|WP_164439497.1|2827003_2827669_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTASAASTTPSRRGLEVIGELVLAEVSRLQEGYRRDRSAAVSSLARLRRGAGRAPMSTPDLWGLIDLAPLHDADSIRGEEAMEHAQNAVFAPLALYALHQQSRSDGMHTNSRAGELGRAVRRLMSAGQLGEPIRKRFVRTGAAADFVTLTVRLRELVSLLRRDGIPLDYALLAEQLYRWQRPGGREAVRRSWGLSFHAAQPRTGDGDSTDSSQNPPEDNAQ
>NZ_CP048875.1|WP_031025699.1|2827665_2828886_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MNSRRLILDVHALQNVPPSNLNRDDTGAPKTAVYGGAVRARVSSQAWKRATRTYFGNVLDPSELGVRTKRVAELLAGRITRLDSSIDERAAWKLAVAVLKAAGIKEIKPPQRKADEAKKNGAPEPAPESEYLLFLSSHQVGALAELAVEGATDIDAFLKIKENKARAKKAADSRHSIDVALFGRMIADSADLNVDAATQVAHALSVHQVANESDYYTAVDDENREEETGAGMIGTVDFNSATLYRYAAVDINLLEKNLGQSLDESDSPATPVRRAVEAFLDGFVSSLPSGKINTFGNHTLPDAVIVKLRTTRPISFVSAFEEPVTADRESAGGHMRGAAERLAAYIPRIEAAYGDEDSTRTWVLHVAPAAEKLAGLGTEAPSLKKLVTAVGAAVAEKLDELPERRG
>NZ_CP048875.1|WP_031025701.1|2828882_2829614_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSSVLTLLLAGPLQSWGSSARFARRTTENAPTKSGVVGLLAAAQGIHRDDEEGLARLASLRFGVRIDQPGTRLRDFQTAHHADTDEPAPVSERFYLCDAVFLAAVEGPHEQLTELHTALCRPEFLPYLGRRSCPPAERIPREVHADTRLEDVLRSTPWLASSWHRERTWSRQESVDLAILVESAGKEQAAKGDTVRDQPLSYDPRHRRYALRTVHATSTTIPHPQAKTDHDPVSHLGEALGEA
>NZ_CP048875.1|WP_164440310.1|2829628_2830354_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLTQFRLNTARAGARKLLSSPQAMHAAVMSSFPEPPATEGGASSPRVLWRLDRNARSEVRLFLSSPARPDLTHLVEQAGWPAVATPEAPGWKTYDYGTFLARLDKGSTWDFRLTANPVHYARTKKGQKSTKRTAHLVPEYQLQWLLDRQDRGGFRVLEKPPERRHVQHGDEYQCVVREQRNLSFRKRGNDDRVQLLAVTYDGRLEVTDPDALRALLTRGLGKAKAYGCGLMTLAPTPQGS
>NZ_CP048875.1|WP_164439498.1|2830360_2831323_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MGTIKTRPRSSPRELPQISDRMSFVYLERCTVHRDAGAITAEDAEGTTHIPSATIGTLLLGPGTRVTHQAMSVLGECGASVVWVGEHGVRYYAQGHGLTRSAALAEAHADRWANRRTRLDTARAMYRLRFPREDPAGLTRRQLLGREGDRLKECYRNEAKRTGVPWHGRHYTPGDFASGDPINQAITAAAQCMYGVAHAVSAAVGCIPALGFVHSGHAHSFIPDIADLYKTEVAIPAAFDTVAEDDIDVGSRTRRALRNRIHQDRLLDRCVRDIFGLLLPDTAAAGAETATSLSTDSVKLRTDHDGEVPGGLNHGEDPIW
>NZ_CP048875.1|WP_037611309.1|2831319_2831673_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MTVIVLTNCPAALRGFLTRWLLEISPGVAIGRPSARIRDLLWDEVTQYSGKGRALLAHTADTEQGFTFRTHDHAWHPTDHEGLTLINRPKPRLSPKPPPTTGWSKAAKRRRFGGGPK
>NZ_CP048875.1|WP_051803282.1|2833907_2834444_+|hypothetical-protein
MRSTRFSKGTLAAATAALVLLPAGAAYAGSGPATPPSQPQKLTRSTAPSPEGNPASRLAQAAGVCDDAVPIGERGLIKRGSETIASVKQFYSKKCQLNYGYVWVWESFRKTAAPYDVTAGVYSYSKDTVYAPKAWKATKQQEFWTEGAATVTHCTSGIGSLRPAGSPQAYQAFSQKRC
>NZ_CP048875.1|WP_030406553.1|2834690_2835224_+|hypothetical-protein
MRTLSPVKGALVAAACAMALLPAGAAQAGDSTAGPAADSGASPMNVQDSDDNPYGEAAERARVCNDAYQIGKTGYIVRKGQRIGSVKQFYSPRCNRNYGYLYVWKSFRQKHRYYSTNIAVYDFNTKKLVGLRVWNRTSQASFWSYPANTVRHCTAARGVIRAPGDVKQNFAYSSKRC
>NZ_CP048875.1|WP_031174966.1|2835276_2836476_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MPAADAGGTPDPLRRLTLADLRRRTSMKWRTYEPDVLPLWVAEMDVPLAEPVAEALTEAVRLGDTGYPAGTVYADALRDFARHRWDWDFPASRTALVPDVMLGIVEVLKLVTGPGDAVVVNCPVYPPFYQFVRHLGRRVIEAPLDAAGRLDPAALESAFARATEGGRRAAYLLCSPHNPTGTVHTEDELADVAARAAARGVRVVADEIHAPLVLPGARHVPYLTVPGSETGFALLSASKAWNLAGLKAALAVAGSAAARELAAMPEEVGHGPSHLGVIAHTAALRHATGWLDSLLAGLDRNRRLLGELLTRLLPGVRHRPGEGTFLAWLDCRALGLGDDPAAAFLDRGRVALNSGLPFGTGGAGHVRLNLATSPEILQEAVRRMASAVPDTGRRTREDP

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Crispr_ID: NZ_CP048875_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_8

2831745-2831957

TypeI-E

I-E

Consensus_repeat	Method
GTGCTCCCCGCGCATGCGGGGATGGTCCCA	CRISPRCasFinder
GTGCTCCCCGCGCATGCGGGGATGGTCCC	CRT

3 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP048875_8

>merge|NZ_CP048875|8|2831745-2831957|CRISPRCasFinder,CRT
GTGCTCCCCGCGCATGCGGGGATGGTCCCAGTGTGGCTCCACTGGAATGCCCTGTCGAGCCGTGCTCCCCGCGCACGCGGGGATGGTCCCATCGCCGCCTCCCTCGGCAAGGGCAACCGTGTGTGCTCCCCGCGCATGCGGGGGTGGTCCTCGTCCGGGAAAACGGAATTGCGTCTCCGGTCAGTGCTCCCCGCGTATGCGGGGATGGTCCCG

>NZ_CP048875|8|8|2831745-2831957|CRISPRCasFinder
GTGCTCCCCGCGCATGCGGGGATGGTCCCA	GTGTGGCTCCACTGGAATGCCCTGTCGAGCC
GTGCTCCCCGCGCACGCGGGGATGGTCCCA	TCGCCGCCTCCCTCGGCAAGGGCAACCGTGT
GTGCTCCCCGCGCATGCGGGGGTGGTCCTC	GTCCGGGAAAACGGAATTGCGTCTCCGGTCA
GTGCTCCCCGCGTATGCGGGGATGGTCCCG

>NZ_CP048875|8|4|2831745-2831956|CRT
GTGCTCCCCGCGCATGCGGGGATGGTCCC	AGTGTGGCTCCACTGGAATGCCCTGTCGAGCC
GTGCTCCCCGCGCACGCGGGGATGGTCCC	ATCGCCGCCTCCCTCGGCAAGGGCAACCGTGT
GTGCTCCCCGCGCATGCGGGGGTGGTCCT	CGTCCGGGAAAACGGAATTGCGTCTCCGGTCA
GTGCTCCCCGCGTATGCGGGGATGGTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_030406549.1\|2842924_2844178_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|235640
NZ_CP048875.1\|WP_016468838.1\|2838312_2840046_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP048875.1\|WP_016468822.1\|2819720_2820710_+\|DNA-polymerase-LigD,-polymerase-domain-containing-protein	unknown	unknown	gnl\|CDD\|240133
NZ_CP048875.1\|WP_016468843.1\|2845495_2847409_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP048875.1\|WP_051803282.1\|2833907_2834444_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_037611309.1\|2831319_2831673_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_CP048875.1\|WP_016468823.1\|2820916_2821204_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016468837.1\|2836691_2838098_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|198375
NZ_CP048875.1\|WP_037611311.1\|2841995_2842814_-\|serine-protease	unknown	unknown	gnl\|CDD\|238113
NZ_CP048875.1\|WP_016468842.1\|2844364_2845339_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP048875.1\|WP_164440309.1\|2825426_2827007_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP048875.1\|WP_016468821.1\|2818655_2819690_-\|Ku-protein	unknown	unknown	gnl\|CDD\|238408
NZ_CP048875.1\|WP_164439498.1\|2830360_2831323_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP048875.1\|WP_031025699.1\|2827665_2828886_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP048875.1\|WP_031025701.1\|2828882_2829614_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP048875.1\|WP_016468839.1\|2840045_2841962_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP048875.1\|WP_164440310.1\|2829628_2830354_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_CP048875.1\|WP_164439497.1\|2827003_2827669_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP048875.1\|WP_031174966.1\|2835276_2836476_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224090
NZ_CP048875.1\|WP_030406553.1\|2834690_2835224_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_030406549.1\|2842924_2844178_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	2.60871e-163
NZ_CP048875.1\|WP_016468838.1\|2838312_2840046_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.85909e-163
NZ_CP048875.1\|WP_016468822.1\|2819720_2820710_+\|DNA-polymerase-LigD,-polymerase-domain-containing-protein	gnl\|CDD\|240133	cd04863, MtLigD_Pol_like, MtLigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Mycobacterium tuberculosis (Mt)LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. MtLigD is monomeric and contains an N-terminal Pol domain, a central phosphoesterase module, and a C-terminal ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The MtLigD Pol domain is stimulated by manganese, is error-prone, and prefers adding rNTPs to dNTPs in vitro. The MtLigD Pol domain has been shown to prefer DNA gapped substrates containing a 5'-phosphate group at the gap.	9.27574e-107
NZ_CP048875.1\|WP_016468843.1\|2845495_2847409_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP048875.1\|WP_037611309.1\|2831319_2831673_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	1.4959e-44
NZ_CP048875.1\|WP_016468837.1\|2836691_2838098_+\|hypothetical-protein	gnl\|CDD\|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	2.08554e-117
NZ_CP048875.1\|WP_037611311.1\|2841995_2842814_-\|serine-protease	gnl\|CDD\|238113	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.	5.52927e-67
NZ_CP048875.1\|WP_016468842.1\|2844364_2845339_-\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.46255e-24
NZ_CP048875.1\|WP_164440309.1\|2825426_2827007_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	2.49637e-129
NZ_CP048875.1\|WP_016468821.1\|2818655_2819690_-\|Ku-protein	gnl\|CDD\|238408	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku. The alignment includes the core domain shared by the prokaryotic YkoV-like proteins and the eukaryotic Ku70 and Ku80. The prokaryotic Ku homologs are predicted to form homodimers. It is proposed that the Ku homologs are functionally associated with ATP-dependent DNA ligase and the eukaryotic-type primase, probably as components of a double-strand break repair system.	1.99901e-109
NZ_CP048875.1\|WP_164439498.1\|2830360_2831323_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.22615e-118
NZ_CP048875.1\|WP_031025699.1\|2827665_2828886_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.87518e-160
NZ_CP048875.1\|WP_031025701.1\|2828882_2829614_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.74434e-44
NZ_CP048875.1\|WP_016468839.1\|2840045_2841962_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP048875.1\|WP_164440310.1\|2829628_2830354_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.20173e-78
NZ_CP048875.1\|WP_164439497.1\|2827003_2827669_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	5.17709e-32
NZ_CP048875.1\|WP_031174966.1\|2835276_2836476_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	2.09472e-143

>NZ_CP048875.1|WP_037611309.1|2831319_2831673_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MTVIVLTNCPAALRGFLTRWLLEISPGVAIGRPSARIRDLLWDEVTQYSGKGRALLAHTADTEQGFTFRTHDHAWHPTDHEGLTLINRPKPRLSPKPPPTTGWSKAAKRRRFGGGPK
>NZ_CP048875.1|WP_164439498.1|2830360_2831323_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MGTIKTRPRSSPRELPQISDRMSFVYLERCTVHRDAGAITAEDAEGTTHIPSATIGTLLLGPGTRVTHQAMSVLGECGASVVWVGEHGVRYYAQGHGLTRSAALAEAHADRWANRRTRLDTARAMYRLRFPREDPAGLTRRQLLGREGDRLKECYRNEAKRTGVPWHGRHYTPGDFASGDPINQAITAAAQCMYGVAHAVSAAVGCIPALGFVHSGHAHSFIPDIADLYKTEVAIPAAFDTVAEDDIDVGSRTRRALRNRIHQDRLLDRCVRDIFGLLLPDTAAAGAETATSLSTDSVKLRTDHDGEVPGGLNHGEDPIW
>NZ_CP048875.1|WP_164440310.1|2829628_2830354_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLTQFRLNTARAGARKLLSSPQAMHAAVMSSFPEPPATEGGASSPRVLWRLDRNARSEVRLFLSSPARPDLTHLVEQAGWPAVATPEAPGWKTYDYGTFLARLDKGSTWDFRLTANPVHYARTKKGQKSTKRTAHLVPEYQLQWLLDRQDRGGFRVLEKPPERRHVQHGDEYQCVVREQRNLSFRKRGNDDRVQLLAVTYDGRLEVTDPDALRALLTRGLGKAKAYGCGLMTLAPTPQGS
>NZ_CP048875.1|WP_031025701.1|2828882_2829614_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSSVLTLLLAGPLQSWGSSARFARRTTENAPTKSGVVGLLAAAQGIHRDDEEGLARLASLRFGVRIDQPGTRLRDFQTAHHADTDEPAPVSERFYLCDAVFLAAVEGPHEQLTELHTALCRPEFLPYLGRRSCPPAERIPREVHADTRLEDVLRSTPWLASSWHRERTWSRQESVDLAILVESAGKEQAAKGDTVRDQPLSYDPRHRRYALRTVHATSTTIPHPQAKTDHDPVSHLGEALGEA
>NZ_CP048875.1|WP_031025699.1|2827665_2828886_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MNSRRLILDVHALQNVPPSNLNRDDTGAPKTAVYGGAVRARVSSQAWKRATRTYFGNVLDPSELGVRTKRVAELLAGRITRLDSSIDERAAWKLAVAVLKAAGIKEIKPPQRKADEAKKNGAPEPAPESEYLLFLSSHQVGALAELAVEGATDIDAFLKIKENKARAKKAADSRHSIDVALFGRMIADSADLNVDAATQVAHALSVHQVANESDYYTAVDDENREEETGAGMIGTVDFNSATLYRYAAVDINLLEKNLGQSLDESDSPATPVRRAVEAFLDGFVSSLPSGKINTFGNHTLPDAVIVKLRTTRPISFVSAFEEPVTADRESAGGHMRGAAERLAAYIPRIEAAYGDEDSTRTWVLHVAPAAEKLAGLGTEAPSLKKLVTAVGAAVAEKLDELPERRG
>NZ_CP048875.1|WP_164439497.1|2827003_2827669_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTASAASTTPSRRGLEVIGELVLAEVSRLQEGYRRDRSAAVSSLARLRRGAGRAPMSTPDLWGLIDLAPLHDADSIRGEEAMEHAQNAVFAPLALYALHQQSRSDGMHTNSRAGELGRAVRRLMSAGQLGEPIRKRFVRTGAAADFVTLTVRLRELVSLLRRDGIPLDYALLAEQLYRWQRPGGREAVRRSWGLSFHAAQPRTGDGDSTDSSQNPPEDNAQ
>NZ_CP048875.1|WP_164440309.1|2825426_2827007_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MLDGREHLLSLREVFEQADGIRRLAGDIATQDFALTRLLLAILHDALEGPRDVDEWAELWEAEQPFGPIDGYLDEHRQRFDLLHPKTPFFQTPGLRTAKGEVFSLDRITADVPNGVRFFTMRALGAERLSFAEAARWVVHAQTYDTSGIKTGVEGDPRAKNGKVYPQGVAWSGSLGGVLAEGDTLRRTLLLNLVAAEADVVTVSDEDKPAWCRPAPEPGPAKDVAERPYGPCDLYTWQSRRLLLHHDEDGVHAVVLTYGDPLAPQNRHKAEPMTGWRRSKPQEKKLGQPLVYMPREHDPARSAWRGLASLLAPRALSTASARDAANELRPGVVHWLAQLMVDGVLPQETLIRLRTYGVKYGTQQSVIDEVTDDSVAMAVVLLHEDDSALGRTALDAVGDADASVRALGDLARDLALAAGSDPGTRQDSAREAGYDALDTAFRDWLSRIRPGDEPERIRTEWQRTVRRIVKDSAGVLISAAGEAAWAGRTVATKHGERHYDAALADRLFRIRLRKALPLAHDSEDPS
>NZ_CP048875.1|WP_016468823.1|2820916_2821204_-|hypothetical-protein
MRYRLTFVSGLAIGYVLGARAGRERYEQLRKGMRRIAENPAVRNAGEAAALSGRQAAAKAADAVQDRLPSSLGDRVRTARDHRARSSSDWGAETH
>NZ_CP048875.1|WP_016468822.1|2819720_2820710_+|DNA-polymerase-LigD,-polymerase-domain-containing-protein
MPHTEIGGHRLSLSNLDKVLYPATGFTKGEAIHYYASVADAVLPHLDGRPLSFLRYPDGVEGEKFFTKHVPPGTPSWVTTRKISVVSKEPLHQVLIQDEATLVWAANLAALELHTPQWQADHQAKADRLVFDLDPGEGADILDCRTIADWLRERAAEDGITVLPKTSGSKGLHLVAPIERTPSDKVSAYAKKLAQEAEADMPDQAVSKMAKVLRGGKVFVDWSQNNQAKTTAAPYTLRAKEHPTVSTPVTWDELAAARKPRDLVFHAADLPARLEEHGDLLAPLLADDGNGRRTGGGTGAAGKRGKSGGDGKSKGKGTGRSATRGRIPE
>NZ_CP048875.1|WP_016468821.1|2818655_2819690_-|Ku-protein
MRSIWKGTISFGLVSIPIKVVAATENHSVSFHQVHTADGGRIRYRKVCELDEEEVPREEIGRGFETEEGRTILLTDDDMAALPLPTAKTVEILGFVPAEEIDPIQLDRSYYLAADGKRADKPYVLLREALKRSGKVAVAKLALRARESLGMLRVYEDALALHTMLWPDEIRAVSGVAPEGEVAVRDAELDLADTLMDTLGELDWSELHDEYREALEALVRAKAEGAEPAPEELRRRGEEGGGKLVDLMAVLERSVQEARSGRAAGEEGEATVHELAERRAGGKAPAKRAASKKAAKKPEAKKTAGKSTGGKAASKAAAPKKTAAKKTAAKKTSAKKPSRPRKTA
>NZ_CP048875.1|WP_051803282.1|2833907_2834444_+|hypothetical-protein
MRSTRFSKGTLAAATAALVLLPAGAAYAGSGPATPPSQPQKLTRSTAPSPEGNPASRLAQAAGVCDDAVPIGERGLIKRGSETIASVKQFYSKKCQLNYGYVWVWESFRKTAAPYDVTAGVYSYSKDTVYAPKAWKATKQQEFWTEGAATVTHCTSGIGSLRPAGSPQAYQAFSQKRC
>NZ_CP048875.1|WP_030406553.1|2834690_2835224_+|hypothetical-protein
MRTLSPVKGALVAAACAMALLPAGAAQAGDSTAGPAADSGASPMNVQDSDDNPYGEAAERARVCNDAYQIGKTGYIVRKGQRIGSVKQFYSPRCNRNYGYLYVWKSFRQKHRYYSTNIAVYDFNTKKLVGLRVWNRTSQASFWSYPANTVRHCTAARGVIRAPGDVKQNFAYSSKRC
>NZ_CP048875.1|WP_031174966.1|2835276_2836476_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MPAADAGGTPDPLRRLTLADLRRRTSMKWRTYEPDVLPLWVAEMDVPLAEPVAEALTEAVRLGDTGYPAGTVYADALRDFARHRWDWDFPASRTALVPDVMLGIVEVLKLVTGPGDAVVVNCPVYPPFYQFVRHLGRRVIEAPLDAAGRLDPAALESAFARATEGGRRAAYLLCSPHNPTGTVHTEDELADVAARAAARGVRVVADEIHAPLVLPGARHVPYLTVPGSETGFALLSASKAWNLAGLKAALAVAGSAAARELAAMPEEVGHGPSHLGVIAHTAALRHATGWLDSLLAGLDRNRRLLGELLTRLLPGVRHRPGEGTFLAWLDCRALGLGDDPAAAFLDRGRVALNSGLPFGTGGAGHVRLNLATSPEILQEAVRRMASAVPDTGRRTREDP
>NZ_CP048875.1|WP_016468837.1|2836691_2838098_+|hypothetical-protein
MGIVAGLDSSAEYTSIVVCDAETGAVVRHGHAAHPGERDDPQSWLLSLGEAASGGQLADVQAIGVSAQQQGLIALDASGATVGPALLGNDPRMQTAAADLVDALGGREAWAQAVGTVPQAGHPVAKLRWLAREHPESARRVAEVMQPHDWLVWQLLGRPEQRVTDRGDASGTGYWSAATESYRTDLVELALGHPVRLPQVAGPAQPAGYTPEGLLISAGTGQTMAAAFGLGVGPGDAVISLGATGSVCAVHHTALTDPTGTITSFADATGMHLPVVRTLNATRVLRGTADMLGTDLEGLSELALTSTPGSSGLVLLPYLEGEQTPQLPHTAGSLHGLRRESMKPEFLARAAVEGMLCGLADALEVLRVRGVPVRRVFLLGKAAELQIVRAAAPALLDAQVVVPEPADYAAIGAARQAAWALSGSGYPPQWPAAACQVFEAGEERAVGQAVRQQYATVREEMYPGALPV
>NZ_CP048875.1|WP_016468838.1|2838312_2840046_+|ABC-transporter-ATP-binding-protein
MLIRLLSARLRHYKRPIALLVLFQLIQTSATLYLPTLNADIIDNGVVLGDTGYILRYGGLMLAVSVVQVVCNIGAVFLGARTAAAVGRDIRAAVFDRVQSFSAREVGQFGAPSLITRTTNDVLQVQMVTLMAFTLMVTAPIMCFGGIFMALGQDVPLSAVLLGVVPVLGITVGLIVRRMRPLFRSMQERLDTVNRILREQISGVRVIRAFVKDDYERRRFQGANTDLTGVQLRTGQLMALMGPVVMTVVNLSSVVVVWFGAHRISSGDMEVGALTAFLSYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLGTSSSVVPPASPVRELRRHGHLELRGAGFGYPGAEAPVLRGVDLVARPGETTAVIGSTGSGKSTLLGLVPRLFDATEGQVLVDGEDVRTLDPALLASVVGLVPQRPYLFSGTIASNLRYGRPDATDEELWHALEVAQARDFVERMDGGLDAPVTQGGSNVSGGQRQRLAIARVLVHRPEIYLFDDSFSALDYATDAALRAALAKETAGATVVIVAQRVATIRDADRILVLDEGRVVGAGRHEELMADNETYREIVLSQLTESEAA
>NZ_CP048875.1|WP_016468839.1|2840045_2841962_+|ABC-transporter-ATP-binding-protein
MSGPGMGAPPRRSMDFKGSGKRLLGQFRPERARLVLMLAVLVVSVGLNVIGPKILGHATDLVFGGFIGQKLPDGLTKEQALEGLRRKGEDGAADMLSGMDFTPGHGIDFGAVGMVLLVVAVVYAAAGLLMLWAGRISTKVITRTVFRLRERVEEKLARLPLSYLDKQSRGEVLSRVTNDIDNLGQTLQQTLGQIVNSLLMIVGVLGVMFWISPLLALVALVTVPLSALVATRVGKRAQPQFVAQWKSTGTLNGHVEEMYTGHALVKVFGRQRESAQVFAEQNEALFRAGFKAQFISGIMQPAMMFVGNLNYVLVAVVGGLRVASGSLSIGDVQAFVQYSRQFSQPLTQVASMANLIQSGVASAERVFELLDAEEQSPEPAGSGAALPGKPRGRVELENVSFRYSEDRPLIEDLSLAVEPGQTVAIVGPTGAGKTTLVNLLLRFYEVRSGRILLDGTDIATLSREELRSGIGMVLQDTWLFGGTIAENIAYGAQGATREQVEEAARAAHADRFIRTLPDGYDTVLDDEGDTVSAGEKQLITIARAFLSDPVILVLDEATSSVDTRTEVLIQRAMERLASERTSFVIAHRLSTIRDADVILVMENGAIVEQGDHRSLLAADGAYARLYKSQFAQAVAEVD
>NZ_CP048875.1|WP_037611311.1|2841995_2842814_-|serine-protease
MRTTTKHRKHLTRAAAVGAVALAAFSLSPAAATARPAATPGGDGEPSATVVGGTRAQQGQFPFMVRLSMGCGGSLLTKDVVLTAAHCVDGSGPDTSITATAGVVDLRDPAAVKVRSTEVVQAPGYDGQGKDWALIKLAKPIDQPTLAIAKDDTYNKGDFTIAGWGADREGGAQQRYLLTAQVPYVDDVTCKSAYPDLVEGEELCAGRMDTGGVDTCQGDSGGPMFRKDDAGQWVQVGIVSWGDGCARPGKPGVYTEVSTFASDIQAAADQLG
>NZ_CP048875.1|WP_030406549.1|2842924_2844178_-|RNA-polymerase-sigma-factor
MPESSERGGGDQDGSQSPADPHTSYGMESGEAAAVPVSHAAPEPAAITLEVAPVQTRTLKAAPLAAPVPLVVPPSPVPEPPPAEVVPLDAVPPQGGAPEAESEPPAARREPAATGPSADLFRQYLREIGRIPLLTAEEEVELARRVEAGLFAEEKLSTTPGLETRLALDLDRLVVMGRVAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPSAEEVAAQLELSPERVTEVLRLAQEPVSLHAPVGEEDDVNLGDLIEDGDAPSPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLLDGRPRTLEEIGHLFGVTRERIRQIESKTLTKLREHAFADQLRGYLD
>NZ_CP048875.1|WP_016468842.1|2844364_2845339_-|alpha/beta-hydrolase
MSQHTHGTHRLVPSPAGRIHLVEQGSGPLVLLVHGFPESWYSWRHQLPALASAGYRAVALDVRGYGRSSKPADPAAYRMLDLVEDNVAVVRALGEESAVIVGHDWGATIAADSGLVRPDVFRAVGMLSVPYAPHGGPRPGEMFAKMGGEEEFYVSYFQQPGRAEVEIEPDVRGWLAGFYAALSADTMPGADEPDPHFVTRGGTLRERFPAGRPAWLAEADLDVYAGEFERTGLTGALNRYRNMDRDWEDLARFAGEPLTVPSFFAGGTRDASTTWLSDAIDAYPTTLPALHGSHLLEGCGHWIQQERPEEINRLLTEWLGALKD
>NZ_CP048875.1|WP_016468843.1|2845495_2847409_-|DNA-primase
MAGRINDEDVKAVRDAVPIDSVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFHVSPSKGLYHCFGCQEGGDTLDFVMKVDHLSFSEAVERLAARAGITLRYEQGGYGRTSQQGERTRLVEAHKIAARFYAEQLDGPEAEVGRRFLAERGFDQEAARHFGIGYSPAGWDHLVRYLRGQGFTDKELISSGLAQEARNGRPIDRFRGRLMWPIRDITGDVVGFGARKLREDDQGPKYLNTPETPIYRKSQVLYGIDLAKREIAKANRAVVVEGYTDVMACHLAGVTTAIATCGTAFGGEHVKILRRVLMDNSQSEVVFTFDGDAAGQKAALRAFEDDQKFAARTWIAITPGGMDPCDLRLAEGDEAVAKVVEGRTPLFDFAMRSIVDRHNLDTAEGRSAALEEAAPIVVQIKDPSIRRGYAVRLAGLLGIVDEEFVVRRVAQLARWARERGPAPQRTVRRPGAEEGPAVRAPFVPRGPDLNLRSPAHRVERELLKLALQRPELVSPAFDAYGADEFTAPPYAVVRQALEAAGGAEAGIGDSGYLGRVRDAAPDDTVRSLITELAVEPLRSARNREVDEAYAGEQLVAVRRAAVLARIAELEGAARRMEARQEYERSAAVRQQIWTLQQYGTALRERGAAAL

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Crispr_ID: NZ_CP048875_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_9

2949724-2949803

Orphan

Consensus_repeat	Method
GCGTACGGGTCGTAGGCGCCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048875_9

>merge|NZ_CP048875|9|2949724-2949803|CRISPRCasFinder
GCGTACGGGTCGTAGGCGCCCTGGTCGTAGCCGCCCTGCTGGGGTGGCTGCGCGGAGGCGTACGGGTCGTAGGCGCCCGT

>NZ_CP048875|9|9|2949724-2949803|CRISPRCasFinder
GCGTACGGGTCGTAGGCGCCCTG	GTCGTAGCCGCCCTGCTGGGGTGGCTGCGCGGAG
GCGTACGGGTCGTAGGCGCCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_031176198.1\|2956475_2957582_-\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP048875.1\|WP_030408511.1\|2946791_2947445_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP048875.1\|WP_016468942.1\|2950654_2950822_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016468937.1\|2945623_2945857_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016468950.1\|2960348_2961602_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197269
NZ_CP048875.1\|WP_016468941.1\|2949937_2950582_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP048875.1\|WP_033229722.1\|2953619_2954282_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016468949.1\|2957985_2960079_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_030408514.1\|2939045_2939891_-\|DegV-family-protein	unknown	unknown	gnl\|CDD\|273257
NZ_CP048875.1\|WP_106963624.1\|2932645_2933647_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|236130
NZ_CP048875.1\|WP_031176201.1\|2952270_2953392_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_031176205.1\|2940891_2943765_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP048875.1\|WP_031176199.1\|2954394_2955666_-\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP048875.1\|WP_016468947.1\|2955867_2956266_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439512.1\|2933586_2936460_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225212
NZ_CP048875.1\|WP_106963699.1\|2937161_2938307_-\|comEA-protein	unknown	unknown	gnl\|CDD\|224472
NZ_CP048875.1\|WP_016468939.1\|2947441_2947894_-\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|376779
NZ_CP048875.1\|WP_016468943.1\|2951053_2952148_+\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|320684
NZ_CP048875.1\|WP_033229724.1\|2939926_2940733_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237874
NZ_CP048875.1\|WP_037611360.1\|2944271_2945645_+\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|172015

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_031176198.1\|2956475_2957582_-\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
NZ_CP048875.1\|WP_030408511.1\|2946791_2947445_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	3.14243e-64
NZ_CP048875.1\|WP_016468950.1\|2960348_2961602_+\|hypothetical-protein	gnl\|CDD\|197269	cd09172, PLDc_Nuc_like_unchar1_1, Putative catalytic domain, repeat 1, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium. Putative catalytic domain, repeat 1, of uncharacterized hypothetical proteins, which show high sequence homology to the endonuclease from Salmonella typhimurium and vertebrate phospholipase D6. Nuc and PLD6 belong to the phospholipase D (PLD) superfamily. They contain a short conserved sequence motif, the HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), which characterizes the PLD superfamily and is essential for catalysis. Nuc and PLD6 utilize a two-step mechanism to cleave phosphodiester bonds: Upon substrate binding, the bond is first attacked by a histidine residue from one HKD motif to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit. However, proteins in this subfamily have two HKD motifs in a single polypeptide chain.	1.96869e-16
NZ_CP048875.1\|WP_016468941.1\|2949937_2950582_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	1.12411e-99
NZ_CP048875.1\|WP_030408514.1\|2939045_2939891_-\|DegV-family-protein	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	3.43098e-97
NZ_CP048875.1\|WP_106963624.1\|2932645_2933647_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|236130	PRK07914, PRK07914, hypothetical protein; Reviewed.	2.31942e-92
NZ_CP048875.1\|WP_031176205.1\|2940891_2943765_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP048875.1\|WP_031176199.1\|2954394_2955666_-\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP048875.1\|WP_164439512.1\|2933586_2936460_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	1.25248e-47
NZ_CP048875.1\|WP_106963699.1\|2937161_2938307_-\|comEA-protein	gnl\|CDD\|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	8.38644e-24
NZ_CP048875.1\|WP_016468939.1\|2947441_2947894_-\|ribosome-silencing-factor	gnl\|CDD\|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	4.50295e-42
NZ_CP048875.1\|WP_016468943.1\|2951053_2952148_+\|M48-family-metallopeptidase	gnl\|CDD\|320684	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase. This family contains peptidase M48 family Ste24p-like proteins that are as yet uncharacterized, but probably function as intracellular, membrane-associated zinc metalloproteases; they all contain the HEXXH Zn-binding motif, which is critical for Ste24p activity. They likely remove the C-terminal three residues of farnesylated proteins proteolytically and are possibly associated with the endoplasmic reticulum and golgi. Some members also contain ankyrin domains which occur in very diverse families of proteins and mediate protein-protein interactions.	1.55435e-80
NZ_CP048875.1\|WP_033229724.1\|2939926_2940733_-\|hypothetical-protein	gnl\|CDD\|237874	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau.	0.000783601
NZ_CP048875.1\|WP_037611360.1\|2944271_2945645_+\|DUF2029-domain-containing-protein	gnl\|CDD\|172015	PRK13375, pimE, mannosyltransferase; Provisional.	6.74436e-50

>NZ_CP048875.1|WP_016468939.1|2947441_2947894_-|ribosome-silencing-factor
MTATDRSVELINVAAQAAADKLAHDIVAYDVSDVLAITDAFLLASAPNDRQVKGIVDEIEERLLKELGAKPARREGEREGRWVLLDYVDIVVHVQHSEERVFYALERLWKDCPELELPEDARATRGKAAEHASATAAGAGQGDDLDGGVR
>NZ_CP048875.1|WP_030408511.1|2946791_2947445_-|histidine-phosphatase-family-protein
MNGTGAVRNRKIVLWRHGQTAWNLERRFQGTTDIPLTDAGLDQARRSARLLAALRPDAIVASDLRRTVATAAELAALTGLDVTYDEGLRETYAGDWQGLTHEEIVARYGEQYAAWKRGEPVRRGGGELETEVADRAAPVVERCAEKLPDGGTLVVVSHGGTIRTTIGRLIGLPSGTWEALGGLSNCSWSVLGETVRGWRLLEHNAGSLPEPVLGDDD
>NZ_CP048875.1|WP_016468937.1|2945623_2945857_-|hypothetical-protein
MGAHSRKCDWCGSGTPIVRDMEPVNTAYQYWCEDCARALIIKGDPIETYRELDGEPIYGRLLEAHCTLKRFYSFATA
>NZ_CP048875.1|WP_037611360.1|2944271_2945645_+|DUF2029-domain-containing-protein
MSTLLQTAERTRSQALRAHLLRRPVTLAAALCMVSFAAFWAAQRTADVSMIDLMVYRAEGWAVRDGRDLYAMRATAAELPTTYPPFAALLFLPLTLLDVPGMRALATFGNLGLLLAVIHLTLRLLGRPLRAPRAAATLLIASAAVWCEPVWTTLRYGQINLLLAVLVLWDLTRRSGHRWAGVGIGVAAGIKLTPALFAVFLALCGLVHGCRLLRRTGRAAALWNPWLRQAAVAAAAFTATVALSALVLPHDSRRFWGEAVFQSGRVGRTEITDNQSLSGAVARLLHTGDPGWVWAVVALAAAVLGLGAAVAAALAGERRLPHAPAWGAVACAVTALLISPISWSHHWVWCVPLLLLLGADAQRHGCRRRLGAAAAGGVVFFSYALWWVPRDADAARAPELDQSAPQMLLSAAYPLAGTAFLVLTAVVALRALRRRHTSPETGTTPAAAPAAQAVAKE
>NZ_CP048875.1|WP_031176205.1|2940891_2943765_-|leucine--tRNA-ligase
MSETTTAAETAAPHRYTAALAADIEARWQDFWEKQGTYEAPNPGDGPLGGEPARTALPKKFIMDMFPYPSGAGLHVGHPLGYIATDVYARYSRMTGHNVLHTLGFDAFGLPAEQYAVQTGTHPRVSTEANMVQMKAQLRRLGLGHDQRRSFATIDPEYYRWTQWIFLQIFNSWYDPEAKAARPIAELVEQFASGARETPEGWGPWHELSERERADLLGEYRLAYASDAPVNWSPGLGTVLANEEVTADGRSERGNFPVFKAKLRQWNMRITAYADRLLEDLDELDWPEAIKLQQRNWIGRSEGARIAFPLGDQHIDVFTTRQDTLFGATYMVLAPEHPLVDSVVPDVWPEGTREAWTGGYATPAEAVAAYRAQAEAKSDVERQAEAKDKTGVFTGAYATNPVSRESVPVFIADYVLMGYGTGAIMAVPAHDQRDFEFARAFELPMRCVVEPTDGRGLDPAAWQDAFSSYDATLVNSANHGISLDGLGVAEAKERMRRWLEEHELGEGTVNYRLRDWLFSRQRYWGEPFPIVYDEDGIAHALPESMLPLELPEVEDYSPRTFDPDDADTSPETPLSRNEEWVNVTLDLGDGKGPRRFRRETNTMPNWAGSCWYELRYLDPHNDERLVDPEAERYWMGPREGMPHGGVDLYVGGQEHAVLHLLYARFWSKVLYDLGHISSSEPFHRLFNQGMIQAYVYRDARGIAVPAAEVEERDGAYYYQGEKVSRLLGKMGKSLKNAVTPDEICAEYGADTLRLYEMAMGPLDVSRPWDTRAVVGQFRLLQRLWRNVVDEASGEVTVVDTEPDEATLRAVHKAIDGVTQDMAGLRFNTAIAKITELNNHVTKLREVPRSVAETLVLLVAPLAPHIAEELWRRLGHDETVVYRDFPVADPAYLVDETVTCVVQIKGKVKARLEVSPSVSEADLEAAALAEPAIVKALGGAEVRKVIVRAPKLVNIVPA
>NZ_CP048875.1|WP_033229724.1|2939926_2940733_-|hypothetical-protein
MDVGVVIVLVLLLAFFVLGGIATVRTVRAVKRGVERTGAQVRRTVEETTLKARSAQPGPVGEAARIRLELRSSIDGTRAALEAGASADPGLSEAVSLLDQLHEHARRLDGELRLLMEREPDRARLAARLPEARERMRHIKESADALRFAAQDRARQFDDEELAELRGRIDIETGALRHWVSEPAPGQAPGAGTPGDGATGHSSASSSSSSPSSSSSSSPSSASFSRQRPAQPELGPSGQQLDPSLTDPTADRRRSAQPFGKRPPRSAS
>NZ_CP048875.1|WP_030408514.1|2939045_2939891_-|DegV-family-protein
MHGRLAIITDSTAYLPPEALRRHRIEAVPLTVVLGDEALEEGTEISARSLATALRERRPVTTSRPSPDMFARAYRAAAGSGAEGIVSLHLSAEFSGTYDAAARAAKDAPVPVRVVDTGVVAMALGFCALAAAETAEAGGSLDEAVSAATKTAERTSAVFYVDTLDYLRRGGRIGAAQALLGSALAVKPLLEIADGRIGMLEKVRTASRAIARLEEIVLERAGEARVDIAVHHLAAAERADQLAQRLRERVPGLRELHVSEVGAVIGAHTGPGLLGAVLSLR
>NZ_CP048875.1|WP_106963699.1|2937161_2938307_-|comEA-protein
MRGPSPLPGTPSAAVLLRGDPAPAPDGAEPLRGSGSLSSPVQAPPWPAGKHGAMAGPGDEEEQGARPAEDEPRPVEIRVAAPHRSASNGDGGDADGALAGRLGERFFAERPEEKGKAGEDEERSRLPLRERWSLALEDRLPLWLRLRCGIEPKTLIAVVLVLLVGIGFAVHHFWTGRPQGVAVPSTPRAAPGEGATRQPGPDGSPVPVPGGAPAPGGPGGPGAAGGASPGKRLVVDVSGKVREPGIHRLPAGSRVTDAIEAAGGLRKGADTEGLNQARLLVDGEQIVVGEPGKAGAAAAPAPGAAAGPAAGGAGGAPGTPISLSSATPEQLETLPGVGPVLAQHIVDYRTQHGGFTSVDQLKDVDGIGDKRFADIKPMVTP
>NZ_CP048875.1|WP_164439512.1|2933586_2936460_-|MBL-fold-metallo-hydrolase
MPELAQRRAAATVEVTVQEDPRALRPRVRGAQQSSGLIMVRAQADTLTDAGGVRTRVRTPVLLLVRTDGATARTRTAWLRLLPSTRLRMRAEMMPPAGDRPGGQDVAAVLRAGPGPPEVMAGPTAVQRAAGELRAGLRKASDGLGEDARGLLPGLVVGDTSRLSPELDEAFRATDMTHLTAVSGANLSILLVLLIGPPGIAHLAERRGLAPRLGLPLRTTAVVAALLTLGFVVVCRPEPSVLRAAACGLITVWAIGTGRRRSLLPALAAAVLALLFYDPWLARDFGFLLSVLATGSLLTLAPRWSAGLRRRGCPGRLAEALAAAAAAQTVCAPVVVVLAAHVSLVAVPCNLLAEFAVAPATVLGFAALVAAPFGMPVAKGCAWLAGWPVEAIAEIARTGASLPGAEMSWPGSWAGALGLAVVSVVLWLVVVRLRLPGRPWLCAVGALALLVALVRPAPLVRPFTGWPPVGWRVVACDVGQGDALVLAADAGRGGGGGAVVVDAGPEPRAVDRCLRGLGVRSVPLVVLTHFHADHVAGLPGVLRGRRVGEIRTTGLAQPADQAAFVRRTAREAGVPVTAAYAGERGRNGDLRWEVVWPLPPSGTVGGNGAPGGSAAGNVGGTGSAGWGGGSEEGGAGANDASVTLLVRTGGLSVFLPGDLEPDAQQALLAQRPDLPRVDVLKVAHHGSRFQDPELLRRLRPRVALVSAGSDNPYGHPARETLGTLAAAGVLVARTDRHGELALVDRPDGTPAVVTRRGSPGADDGAPMPPVPASGQGAGAPERAGRTRRRSLPSCGGPASAAGGRRPGGGGVSRAPASLRVRRRGSRAGRGRGGRRDLRAPPATGRPRRRPRRPARPARAPALRSDPGAPPVRRPLPRPRPGRAAPVHAVRRSPRHCPSDGWRGVRGPVPGLPCGPVPGAARGPVPGGEGGAGCRRGVGCCSRWLVSGRRPRTIPSPP
>NZ_CP048875.1|WP_106963624.1|2932645_2933647_-|DNA-polymerase-III-subunit-delta
MLFAMAGKRKKTSDDPLAPVTVAVGQEELLVERAVRVVIDAARAADADTDVRDLAPGDLQPGTLAELTSPSLFAERKVVVVRAAQDLAADTVKDVKAYLAAPVEEITLVLVHAGGAKGKGLLDAARKAGAREVECPKMTKPADRLAFVRGEFRTLGRSATAEACQALVDAIGSDLRELASACAQLTADVEGTIDEAVVGRYYTGRAEASSFTVADRAVEGKAAEALETLRWAVATGVAPVLITSALAQGVRAIGKLAGAPRGARPGDLARELGMPPWKIDRVRQQMRGWTPDGVATALRAVAEADAAVKGAGSDPEYALEKAVVTIANAARAR
>NZ_CP048875.1|WP_016468941.1|2949937_2950582_-|nicotinate-nucleotide-adenylyltransferase
MGEYGEDSVPGTAKRRLGVMGGTFDPIHHGHLVAASEVAARFHLDEVVFVPAGQPWQKSHRKVSPAEDRYLMTVIATASNPQFSVSRIDIDRGGKTYTIDTLRELAEANPKTDLFFITGADALSQILSWRNTEELFSLAHFIGVTRPGHALADPGLPQGGVSLVEVPALAISSTDCRARVERGDPVWYLVPDGVVRYISKRALYTGGPEGESRA
>NZ_CP048875.1|WP_016468942.1|2950654_2950822_-|hypothetical-protein
MTLPSTAHDALLTLASGGEHGEGGHESLSPYLTGGGALVALFLLLWITTRFNRDR
>NZ_CP048875.1|WP_016468943.1|2951053_2952148_+|M48-family-metallopeptidase
MTDGTGGTERLPGRERRRFPGISSRAYEHPTDRSALVSLRKLSGFDTAVKALSGLLPERSMRLLYLSDSVRVSDQQFAHLNAMLRDACYILDLEKVPPMYVTQDPKPNAMCVGMDEPVIVVTTGLVELLDEEEMRAVIGHEVGHALSGHAVYRTVLLFLSNLAVNIAWIPLGSVAVRALMVALREWFRKSELSADRAGLLVGQDLQASMRGLMKLAGGNHLHEMNVDAFLAQAEEYEAGGDVRDSVLKIMNVMPRSHPFTTVRAAELKKWAASRDHQRIMDGHYPRRSEDKDASIRDSFRESADHYSESVRTSKDPLMGIFRDIAGGVGDVGSKLRDTFTGGRNPGGGQGGSGGGANGSSNTEN
>NZ_CP048875.1|WP_031176201.1|2952270_2953392_-|hypothetical-protein
MAGRVDPPDGMPDGAPGGDDEYRSLVFDESFIKAARLQEFSAKERLEDEEHAAVRARSDAEREGRAALGFSRQGLVLVLLIVIAFGTAIYMGIRNPYRTPPRAGDEPLRSEVMPLAPVDPVPGATPADLFAHSPAARFAKGADGVTLPAPVRGSDHFSESQVQAALLAAKDYIVESSIDPEVLTGAVQPVRALLAPRQQRQFDRSVNDPRDDGKHAATAWMVRFDRARAVLASDQVRVRGTLTAQEVATNALEVTADHVFVYALRPTEAGRGKDADKAASLFSVRREVRFHIERSDLQDHRVSLRQVSMRVGPMNCGEDPSDTLSPLLAGERAKDAGKAGTDPFARGRSTASMCGLLAADAQPKPAHPARQEG
>NZ_CP048875.1|WP_033229722.1|2953619_2954282_-|hypothetical-protein
MPDDVGGQPFPDGEEPEYRDHGAADDEFASVVLDEDFVRAAEVHEPSAAERILASAQSHAELTEGDSQRLLDESAGYARAKQDFPPDDPADDEPCFDDDPEDEGRFDRSEYREYGPHGVPPELEPAYEHGADFGYLHGAHGPRAGGGGRPYRGHRSWQRPVAWVLAVVMGIGVVALAFSAVYRGASNQRQEPAPPPATSGVEPTSEPDALPSVSAGTPGG
>NZ_CP048875.1|WP_031176199.1|2954394_2955666_-|glutamate-5-semialdehyde-dehydrogenase
MSAPQTTDSPVLEAARRARTAAADLAPAPRTLRDAALAAIADALTARTDEIVTANAEDVSAARAAGTPESVVDRLTLTPERVAAIASDVRDVIALPDPVGEVLRGSTLPNGLELRQVRVPLGVVGIIYEARPNVTVDAAALCLKSGNAVLLRGSSSAHASNTALVAVLRDAVTEAGLPADVVQLVPGQSRESVTELMRARGLVDVLIPRGGASLIKTVVEQSTVPVIETGTGNCHVYVDERADLETALAILVNSKAQRPSVCNAAETVLVHEGIADAFLPRALDALAQAGVTVHGDKAWQQAGGETVVPATDDDWAAEYLSYDIAAAVVPSLDAAVEHIRTHSSGHTEAIVTTDTAAARRFTALVDSAAVMVNASTRFTDGSQFGFGAEIGISTQKLHARGPMGLPELTSTKYVVTGDGHIRR
>NZ_CP048875.1|WP_016468947.1|2955867_2956266_-|hypothetical-protein
MRRLASVDMASSPQPEERAASRLWHITLSVAGQEAPLGEVRRALEQLAHDHPFLLTSRYANDHAEIRYWEEARDLHDAAAVALRLWGEHRSTARLPPWEIVGLEVIGRRTYQQRVAEGYGPPPASRVGVHPF
>NZ_CP048875.1|WP_031176198.1|2956475_2957582_-|glutamate-5-kinase
MAEARRVVVKVGSSSLTTAAGGLDADRVDALVDVLATHAARPDREIVLVSSGAIAAGLAPLGLTKRPRDLARQQAAASVGQGLLVARYTASFARYGRRVGQVLLTSDDTSRRAHYRNAYRTLDQLLTMGAVPVVNENDTVATDEIRFGDNDRLAALVAHLVRADLLVLLSDVDGLYDGNPATPGTRRIGEVRGPAELEGIDIGSAGSAGVGTGGMVTKVEAAGIAAGAGIPVVLTSAVHAADALAGRGTGTYFHPTGRRAAGRLLWLAHASAPTGALTLDDGAVRAVVDRRTSLLPAGIAGVEGEFSAGDPVELRDSEGRAVARGLVNFDARELPRLLGRSTYELARELGPAYEREVVHRDDLVVLRP
>NZ_CP048875.1|WP_016468949.1|2957985_2960079_+|hypothetical-protein
MPSAGLSTRRAVQLAALLALAVFYTAQLAGALLPNVPVFVTASLAGLALDLYLTHQQPGLLALLGKVRFDVTTRQLLRDMLIVIGLVRIPDVPPDIERPLTLLLLFVYAAHFLCQAVAQLVRRSRTLPVVTRNIDATALNLTNAPSRLLARQPSRRLLRFSIPGTLGLMLTAGLSQQEWGLVGVGCSFLLSLGSAFYLATWLLPKKRARSEQEVLAWLDKWLADYRPTVGMYFSGGTTSAYQANMWLGTLADLDGRPLIVLRERFMVQKIDATDIPIVCIPKVAHLMRLEHSTLRVLIHPANSGKTSQVLRIPTIKHAFINHGESDKLSSCNPYAKAYDEVWVAGEAARERYALAEVGVDDNDVVEVGRPQLSPIQHADERAAAPRSAYTTVLYAPTWEGWDGNPGNTSVVLAGENIVRHLLADPKVRLLYKPHPMTGSVDPRAGAADQRIRAMITQANAERGSGRRDAEAVAELERRTAELDRVTTTAFRASADEMERMKVQGAPEEGNADRVRAATEAWEAAYWASFPESEHQIITGPRPAIFTCFNQADLLISDVSSVVSDYLSSEKPYAVANTSGMTEEEFRATFPTVRAGTVLTPDAKQVPALLETVRDPAKDTLVQARKELKRHLLGPSDPPSLVRFNAAALKLAAEADARNARVARRTAEIPGQRETNQGAEESELEAPGAADPEDAVTT
>NZ_CP048875.1|WP_016468950.1|2960348_2961602_+|hypothetical-protein
MSRLQAAAPPLAALLLAAGLPLTTPAHAQTAAPRTGPVFNQPDGTRAQQRAIRSALLTRIKGAAPRSTVKVALYHFWDAGIARALAGAHTAKKRRVNVQVMLDESSVSSMPSSTSYGILRKALGTDRRKRSFVGLCPKNRSCLGDPAAGASIAHNKFWLFSDTGGLRNVVVQTSSNLSSGSYSKFWNDALVVAHTGTYTAYSRYFDAVAKADWRAWRYTRRTAGPYTGYFFPRPHGGDTVTGILDNVTCRWRDAQGEHRTAVRLAMFKLTRQAVADRLRSLQRQGCAVDIVYAETDSADSTGSPGTWETLHQPGGPTVRCLHYDDDGDPGTSRQVVHSKTLLITGRYAGARRALVWTGSHNYSGPALTKNDETLLKVDSPAVHDAYLQRFRALRASAVPGVHDDTPSCKGVSPQPEH

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Crispr_ID: NZ_CP048875_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_10

3073622-3073775

Orphan

Consensus_repeat	Method
GTGCTGGGACCAACCCCGCGCGTGCGGGGAGCACA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP048875_10

>merge|NZ_CP048875|10|3073622-3073775|PILER-CR
CTGGGGCCAACCCCGCGCGTGCGGGGAGCACATCGGCCACAGCGTCGGGGACCACTGGGTGCAGGGACCAACCCCGCGCGTGCGGGGAGCACTCGGGCACCCGGCGGTTGGCGGGCCGCGTGCTGGGACCAACCCCGCGCGTGCGGGGAGCACA

>NZ_CP048875|10|4|3073622-3073775|PILER-CR
CTGGGGCCAACCCCGCGCGTGCGGGGAGCACATCG	GCCACAGCGTCGGGGACCACTGGGTG
CAGGGACCAACCCCGCGCGTGCGGGGAGCACTCGG	GCACCCGGCGGTTGGCGGGCCGCGTG
CTGGGACCAACCCCGCGCGTGCGGGGAGCACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_135567103.1\|3073173_3073410_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_159393666.1\|3074378_3074522_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016469026.1\|3064619_3065189_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236092
NZ_CP048875.1\|WP_164439525.1\|3060123_3060717_-\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP048875.1\|WP_164439528.1\|3077399_3077771_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016469025.1\|3062787_3064194_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293810
NZ_CP048875.1\|WP_030407613.1\|3074606_3075242_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
NZ_CP048875.1\|WP_016469024.1\|3061949_3062366_-\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP048875.1\|WP_016469018.1\|3055434_3055893_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_CP048875.1\|WP_016469022.1\|3060794_3061076_+\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197385
NZ_CP048875.1\|WP_053934175.1\|3077935_3078406_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240040
NZ_CP048875.1\|WP_164439529.1\|3080008_3080704_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378924
NZ_CP048875.1\|WP_106963704.1\|3078429_3079371_+\|hydroxymethylbilane-synthase	unknown	unknown	gnl\|CDD\|234612
NZ_CP048875.1\|WP_016469019.1\|3055897_3057562_-\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_CP048875.1\|WP_016469023.1\|3061188_3061953_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP048875.1\|WP_030407614.1\|3075321_3076506_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP048875.1\|WP_031176579.1\|3058347_3059838_-\|Cys-Gln-thioester-bond-forming-surface-protein	unknown	unknown	gnl\|CDD\|369823
NZ_CP048875.1\|WP_164439526.1\|3076804_3077065_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439527.1\|3077203_3077407_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_031176314.1\|3080978_3081881_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_030407614.1\|3075321_3076506_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.60318e-13
NZ_CP048875.1\|WP_030407613.1\|3074606_3075242_+\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	3.55633e-21
NZ_CP048875.1\|WP_016469026.1\|3064619_3065189_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|236092	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional.	1.53616e-25
NZ_CP048875.1\|WP_164439525.1\|3060123_3060717_-\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	2.97479e-23
NZ_CP048875.1\|WP_016469025.1\|3062787_3064194_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	8.46915e-57
NZ_CP048875.1\|WP_016469024.1\|3061949_3062366_-\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	6.54817e-30
NZ_CP048875.1\|WP_016469018.1\|3055434_3055893_-\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	4.77481e-29
NZ_CP048875.1\|WP_016469022.1\|3060794_3061076_+\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|197385	cd10148, CsoR-like_DUF156, Transcriptional regulators CsoR (copper-sensitive operon repressor), RcnR, and FrmR, and related domains; this domain superfamily was previously known as DUF156. This superfamily includes various transcriptional regulators that respond to stressors including Cu(I), Ni(I), sulfite, and formaldehyde. It includes CsoR (copper-sensitive operon repressor) from Mycobacterium tuberculosis (MtCsoR), Bacillus subtilis (BsCsoR), Thermus thermophilus (TthCsoR), and Staphylococcus aureus (SaCsoR), Mycobacterium tuberculosis RicR (regulated in copper repressor, MtRicR), Escherichia coli RncR (formally known as YohL, nickel and cobalt-sensitive), Alcaligenes xylosoxidans NreA (nickel-sensitive), E. coli FrmR (formally known as YaiN, formaldehyde sensitive), and Staphylococcus aureus CstR (CsoR-like sulfur transferase repressor, NWMN_0026.5, SaCstR). CsoR is Cu(I)-inducible, and regulates the expression of genes involved in copper homeostasis. For example, TthCsoR binds the promoter region of the copZ-csoR-copA operon, and represses expression of these genes, which encode the copper chaperone CopZ, CsoR, and the copper efflux P-type ATPase CopA, respectively. In the presence of excess Cu(I), TthCsoR binds this ion, and is released from the DNA, allowing expression of the downstream genes. TthCsoR also senses other metal ions such as Cu(II), Zn(II), Ag(I), Cd(II) and Ni(II). CsoRs form a homotetramer (dimer of dimers). In the case of MtCsoR, two Cys residues on opposite subunits within each dimer, along with a His residue, bind the Cu(I) ion. These residues are conserved in the majority of members of this superfamily. Exceptions include the functionally uncharacterized Bacillus subtilis YrkD where there is an Asn instead of His (C-N-C), E.coli RcnR where there is a Thr instead of the second Cys (C-H-T), or TthCsoR and E.coli FrmR where there is a His instead of the second Cys and which have an additional N-terminal His (not found in those family members having C-H-C) that may also be involved in metal binding (H-C-H-H). A conserved Tyr and a Glu residue facilitate allosteric regulation of DNA binding. SaCstR regulates genes predicted to function in sulfur metabolism; it is thought that oxidation of the intersubunit Cys pair to a mixture of disulphide and trisulphide linkages by sulfite, results in a reduced affinity of SaCstR for the operator DNA. SaCstR exists as a mixture of oligomeric states, including dimers, tetramers and octamers. The sequence of SaCstR was not available at the time this hierarchy was curated and therefore was not included. Escherichia coli RncR represses expression of the gene encoding the nickel and cobalt-efflux protein RcnA. The gene encoding Alcaligenes xylosoxidans NreA is part of the nre nickel resistance locus located on the pTOM9 plasmid from thisbacteria. Escherichia coli FrmR regulates the formaldehyde degradation frmRAB operon.	1.68074e-25
NZ_CP048875.1\|WP_053934175.1\|3077935_3078406_+\|NUDIX-domain-containing-protein	gnl\|CDD\|240040	cd04684, Nudix_Hydrolase_25, Contains a crystal structure of the Nudix hydrolase from Enterococcus faecalis, which has an unknown function. In general, members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity. They also contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.68808e-19
NZ_CP048875.1\|WP_164439529.1\|3080008_3080704_-\|alpha/beta-hydrolase	gnl\|CDD\|378924	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family. This family contains alpha/beta hydrolase enzymes of diverse specificity.	1.53413e-14
NZ_CP048875.1\|WP_106963704.1\|3078429_3079371_+\|hydroxymethylbilane-synthase	gnl\|CDD\|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	1.01068e-114
NZ_CP048875.1\|WP_016469019.1\|3055897_3057562_-\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP048875.1\|WP_016469023.1\|3061188_3061953_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	8.99175e-19
NZ_CP048875.1\|WP_031176579.1\|3058347_3059838_-\|Cys-Gln-thioester-bond-forming-surface-protein	gnl\|CDD\|369823	pfam08341, TED, Thioester domain. This domain is found near the N-terminus of a variety of bacterial surface proteins and pili. This domain contains an unusual covalent ester bond between a conserved cysteine and glutamine residue.	5.47196e-12

>NZ_CP048875.1|WP_135567103.1|3073173_3073410_+|hypothetical-protein
MASEAGFARLGRRLDVVLERTDHAEEDVRRLREDHDQDITGLRAAVEDLKRARWPLPSVAALTGLAALVLTLYELAAR
>NZ_CP048875.1|WP_016469026.1|3064619_3065189_-|single-stranded-DNA-binding-protein
MNETHVTVMGNVATKIDHWMSPSGVPVARFRLASTVRRFDKREERWADAGTSFYTVWAWRSLATNVASSVARGEPVIVRGQLRIVEDERDGRRYLTADLMASTVGHDLTRGTAAFVRVARAQSGPHLTHGPAPAWPPAEAHDAAPFGPSGGGGAGTPDAAPVAAAVAVSAPGAGTDDDEPGPEPLGTPR
>NZ_CP048875.1|WP_016469025.1|3062787_3064194_-|MBL-fold-metallo-hydrolase
MFFVDTLKFEGLGNRSYLAGGPGTAVVVDPPRDIDQVLTAAARRGVRLAYVVETHLHNDYVSGGLQLARLTGAEYLVPAGAPVAFRRTAIADGDTVAVDEGLVLRAVATPGHTPHHTSYVLEEQGRAVAAFTGGSLLIGTVGRPDLVEPRLTEQLARAQHASAHRLADELDDEVRVLPTHGFGSFCASTQAAGETTTIGAEREQNDALTKDVDTFVAEVLAGLDDIPAYYAHMGPANAAGPAPVDLTEPEPADAAQIADRLAAGEWVVDLRNRVAFAEGHVAGSFNFEAEGQLATYLAWLIPWGKPVTLLGETPEQIASAQRELARVGIDRPAAAASGDPAAWVREGEQLAAFPRARFADLAAERHSGAQVVVLDVRRTSERRAGYVEGSVHIPLHELPGRLREVPDGVVWVHCAGGMRAAIAASMLDAAGREVVAVDDGFGSATDAGLTLIRPDGTEGGGASTRTTT
>NZ_CP048875.1|WP_016469024.1|3061949_3062366_-|rhodanese-like-domain-containing-protein
MFPPSPPTLPTPPSPPTPPSSRSLRGADRLGPAQAHRRAVDGQAVLLDVREEDEWDAGHAPGALHLPLSRLKAGAALPAAARGKPVVAVCRSGHRSQEAAELLAGRGIEATDVAGGMTAWAREGLPVTGGSGGSGVIA
>NZ_CP048875.1|WP_016469023.1|3061188_3061953_-|sulfite-exporter-TauE/SafE-family-protein
MSALVLALVAGGVVGLALGALGGGGSVLAVPALIYLLGFTPAAATTASLIVVTATSLTALYAHARAGKVRWKAGALFAAAGLLPAAAAGAVAARLPQPVLTCAFAVVAGFAAVRMLRSGRAGDGAGEEPGAAVVRPVKAAGTGAGLGALTGLIGVGGGFLVVPALVTVLAFEMQAAVGTSLLVVSANSLASLATRGATAHGLDWALIAPFAGAAILGGWDGRRLAAKVTGTLLRRIFAVLLLAVAAFMLVDALI
>NZ_CP048875.1|WP_016469022.1|3060794_3061076_+|metal-sensitive-transcriptional-regulator
MELSMAAEELKTAVNRLRRAQGQIAGVIKMIEEGRDCEDVVTQLAAASRALDRAGFAIIATGLQHCLTDTDMAASEDREQMRARLEKLFLSLA
>NZ_CP048875.1|WP_164439525.1|3060123_3060717_-|rhodanese-like-domain-containing-protein
MTPTTPSPAPTPPGTALTADEAHALGELTVVDVRTPGEYASGHLPGAHNIPLGRLDEALPALRTAAGRGALLVVCASGARSAQAVERLAAQGVPAATLTGGTTAWSGLGHELDRTTGGRTPWPMERQVRLAAGSLVLSGLLLGRRRARARWISAGVAGGLVFSALTGTCGMAKVLARLPHNQPRATDLEATIAALNG
>NZ_CP048875.1|WP_031176579.1|3058347_3059838_-|Cys-Gln-thioester-bond-forming-surface-protein
MTSVRARAARRLTVVAAATGLCAVSAAMSAPHATARPHAGGPTHLGAPAGGLPEERSGATATLNGLTTHDEAVVTVDGERQKIGAGLFEMTVEGGGTLQTYGIDALNPAQAQSRYAEGEWKSSPLSGNPNAGKIRWVVEHSYPRRNDLEALAEAAGAKRLTPETAAAGTQVAIWRFAEKGARGDGRGEARGTAPRKRPVITATDPAAQKLAAYLVKKARSVAEPRASLAFDRAEVSGRSGERTAPVTVRTTASEVTVAPGPRARSAGVKVVDAKGKQVRSARNGTKLFFDVPKEADFGAASLTAQAAAKVPVGRVLTGLGERGRSQAQILAGSSQSTVSATAVVNWAERGPVPAATARENCAGHGVDVTVTNGADAVFPLRVGKQRQVIAEGERGTVTVPVEEDQPYRIPVHGPHGYVKTFSGVLDCTTTASLGTVTQQSAPLTAERPATVGGGTAAAAEGDLAQTGSGNTRLIAALAIGFVAVGVTTLRALRRRS
>NZ_CP048875.1|WP_016469019.1|3055897_3057562_-|energy-dependent-translational-throttle-protein-EttA
MAEYIYTMRKARKAHGDKVILDDVTLSFLPGAKIGVVGPNGAGKSTVLKIMAGLEQPSNGDAMLSPGYSVGILLQEPPLDESKTVLENVQDGVAETKQKLDRFNEIAEQMATEYTDELMEEMGKLQEQLDHSGAWDLDAQLEQAMDALGCPPGDWPVTNLSGGEKRRVALCKLLLEQPDLLLLDEPTNHLDAESVQWLEQHLAKYPGTVVAITHDRYFLDNVAGWILELDRGRAIGYEGNYSTYLEKKQSRLKVEGQKDAKRAKRLKDELEWVRSNAKGRQAKSKARLARYEEMAAEAEKTRKLDFEEIQIPPGPRLGNVVVEVENLSKAFGDKVLIEDLSFTLPRNGIVGVIGPNGAGKTTLFKMIQGLEQPDSGSIKVGDTVKISYVDQTRANIDPNKTLWAVVSDELDYINVGQVEMPSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETLSSLENALLDFPGCAVVVSHDRWFLDRVATHILAYEGDSKWFWFEGNFESYEKNKIERLGPDAARPHRATHKKLTRS
>NZ_CP048875.1|WP_016469018.1|3055434_3055893_-|acyl-CoA-thioesterase
MRHSYRCPLRWSDMDANGHVNNTVYLRYLEEARIDFLTVAARASDPEAFTGSTVVARHEIDYLRQLVHRADPVTVELWVEKLTAASVTFGYEIKDADAVPVAAGPGAAKSRGPYVRARTVVVPYNIEEGFPRRLSAAERAFLEDYFDDSHRG
>NZ_CP048875.1|WP_159393666.1|3074378_3074522_-|hypothetical-protein
MAAPIVVYPPDEDGGRRAAPDARFPAAPTARAICWNFSAAPASIPTT
>NZ_CP048875.1|WP_030407613.1|3074606_3075242_+|HAD-family-hydrolase
MITDIVFDVGETLVRDDRYWGRWADWLNVPRHTLSALVGAVVAQGRDNANAIRLLRPGIDVDTERAAMEAAGAGEILDDSDLYSDVRSGLAALRDAGYRVHIAGNQTARAGDLLRALNLPVETVSTSGEWGCAKPAPAFFARVLETAGSQPAETLYVGDHPANDIVPAATAGLRTCLLRRGPWGHLWFDATDPAPEFRVDSIFDLLRVLTS
>NZ_CP048875.1|WP_030407614.1|3075321_3076506_+|helix-turn-helix-transcriptional-regulator
MPVDPRSRVGESIAAARQLARMTQKELADASGVSYSMVRAIERGARMPGDSVLDALAAVLGVDPARLLGNHGNTDSRVHDEIPELSRVIAAYDMPQDGPVRPLHELRAAVEEAVTWRVGAQYLRIARGIPSLLDELARALDGVRDGAERREVAQLLVAAYRAADAVAYKFGYRDLSARLVELMRWAATGAEDPLLDATVAYVRTETFFAAEAHDPGLRALERALDSAPVTPGRAEVAARGTLHMRAAVIAGRAGCEDAALMHIDEARRCGDQVPEGIYEGTVFGPSSIRIHEVSLAVSLGGRHLQRALDIAHEWAPPRTLSAERRSGFYIELGRAQLWAGQPDHAFESLKVARRIAPQHTREHRWVREDIATLRRLKRADREDLSNYAGWCQAV
>NZ_CP048875.1|WP_164439526.1|3076804_3077065_+|hypothetical-protein
MPQRGDYVVDHSTAVPPAPPWVGRVRQTHRDGTVLLITPTGYAWTAAPGDMRSATEEERAAYDAQVCGIQWERDALYRQLRGGARS
>NZ_CP048875.1|WP_164439527.1|3077203_3077407_+|hypothetical-protein
MTAPDPAIASVRAALERDLTTCSGCGQMPRLDVTTTPVAGDYPPIISVTRRCACPPPQYPTKEPADG
>NZ_CP048875.1|WP_164439528.1|3077399_3077771_+|hypothetical-protein
MAERTTRSLTLVRHVRWKLHIVGHHDAASSPFLTSNWRASSAQDRADALACLARDAQNRVLPRAASGPAFTLATRLRRAARNHDDAAGPFTVEPDETTDPVVQMRAAVLLAHAALRSDCWANT
>NZ_CP048875.1|WP_053934175.1|3077935_3078406_+|NUDIX-domain-containing-protein
MAHRSPPGFPAAAYALVTNQSRQVLIVQPPGTGGAPWRLPGGLVEPGETPREALRRELAEELGLERQADTLLAVEWVLPRAPDRRARVAFLFSTLPVTTAEAAGLTLQRDEVAACRWVPEEEAVTLLHERHATRLTRARTGPLPVYLEHRPQERPL
>NZ_CP048875.1|WP_106963704.1|3078429_3079371_+|hydroxymethylbilane-synthase
MRIGTRSSPLALAQTQQVAGLLRRLVPDLTIETVPTTTEADKWQGDLAQLGGKGLFVKAIDQQLQRGDIDMAVHCLKDVPGDQPMPQGLIFAAMLPRADVRDVLVVPDGSPVKSLGDLPPGATVATTAVRRKAQILARRPDLNVVRVRGAVGTRIEKLDGKKGDLQADAMVLARAGLERLGLTDRIVYQFPIQEMLPAVGAAVLALECRRDDAPVAGLLDRLNDRKTQTEATAERVMLHGLRGHCNSPIAGYCTTEPDGQLSLRGMVFSRDGSKFAHAHIWGETSNDPGRLGSRVCAELLRQDARDIIDGILH
>NZ_CP048875.1|WP_164439529.1|3080008_3080704_-|alpha/beta-hydrolase
MRVVFVHGACVRDGAWWWHRTAALLRERGVPSEAPALPSCGETGLPAGTGGPGLPEDVAAVRQALLDSDEPTVVVAHSYGGIVTAEAAAGVGSVRHLVLVSSYLPEAGQSLSDFGNGGPAPFLDADPETGTFRVRPELLVETFLHDCDAEVQAQAADHLARQSVRVTGQPVGASAWQQAPTTYLVCAQDRGTPPHLQREFARRAGNVIELAAGHHPFLSHPATVRDVLLNL
>NZ_CP048875.1|WP_031176314.1|3080978_3081881_-|hypothetical-protein
MRMRATAAAVSGALALTALAIPAAQAATAASKGDTVSSVRAAHEADLRKATSAHRDAAGFGARAVPDDGIGDTKVSSVVVNGGKNVALGTTKAKTVKVSFTVTDDSGIEFADAILWQGDTFEDMKAGLLPNEDEAVCTATSATSADCKLTYTIDPKIDLYNNMAGTWKVSVIAAGQDGDFTDKDNAKSFKLQRYSKLTANAAPEPIKKGKTLTITGKLTRANWDTGKYAGYTKQKVTLQTRPASGGSYTSSKTYTSGSGSSAGVVKTTRTASKDTCYRYTFAGTSTTPSVTSSGDCVDVR

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Crispr_ID: NZ_CP048875_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_11

4235076-4235170

Orphan

Consensus_repeat	Method
CGGCCACCACGCCGCCGCCGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048875_11

>merge|NZ_CP048875|11|4235076-4235170|CRISPRCasFinder
CGGCCACCACGCCGCCGCCGAGCCAGGACCCCACCGACGACGAGTCCCCCTCCAAGGAACCGTCCGACGAGCCGTCCACCACGCCGCCGCCGAGC

>NZ_CP048875|11|10|4235076-4235170|CRISPRCasFinder
CGGCCACCACGCCGCCGCCGAGC	CAGGACCCCACCGACGACGAGTCCCCCTCCAAGGAACCGTCCGACGAGC
CGTCCACCACGCCGCCGCCGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_016472078.1\|4230503_4231586_-\|inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|132491
NZ_CP048875.1\|WP_016472081.1\|4227665_4227968_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016472083.1\|4226430_4227006_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236092
NZ_CP048875.1\|WP_031174649.1\|4251953_4252574_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|173926
NZ_CP048875.1\|WP_037612081.1\|4243090_4245562_+\|murein-biosynthesis-integral-membrane-protein-MurJ	unknown	unknown	gnl\|CDD\|273763
NZ_CP048875.1\|WP_016472068.1\|4249007_4250402_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
NZ_CP048875.1\|WP_037612080.1\|4240562_4243052_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP048875.1\|WP_016472069.1\|4248141_4249011_+\|RNA-polymerase-sigma-factor-SigM	unknown	unknown	gnl\|CDD\|236604
NZ_CP048875.1\|WP_016472080.1\|4228203_4229334_+\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	unknown	unknown	gnl\|CDD\|225224
NZ_CP048875.1\|WP_016472066.1\|4251535_4251865_+\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP048875.1\|WP_164439670.1\|4235838_4237371_+\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|227937
NZ_CP048875.1\|WP_016472079.1\|4229397_4230429_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|376473
NZ_CP048875.1\|WP_016472084.1\|4225707_4226154_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NZ_CP048875.1\|WP_031174646.1\|4245696_4248057_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270875
NZ_CP048875.1\|WP_016472074.1\|4237485_4238832_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP048875.1\|WP_003978893.1\|4226172_4226409_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NZ_CP048875.1\|WP_016472082.1\|4227109_4227400_-\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
NZ_CP048875.1\|WP_031174644.1\|4238797_4240225_-\|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|131739
NZ_CP048875.1\|WP_016472085.1\|4224234_4225581_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240541
NZ_CP048875.1\|WP_031174641.1\|4231636_4232305_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_016472078.1\|4230503_4231586_-\|inositol-3-phosphate-synthase	gnl\|CDD\|132491	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.	0
NZ_CP048875.1\|WP_016472084.1\|4225707_4226154_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	1.78082e-65
NZ_CP048875.1\|WP_016472083.1\|4226430_4227006_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|236092	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional.	7.55957e-88
NZ_CP048875.1\|WP_031174649.1\|4251953_4252574_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|173926	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.	1.02027e-05
NZ_CP048875.1\|WP_016472068.1\|4249007_4250402_+\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	1.07078e-07
NZ_CP048875.1\|WP_037612080.1\|4240562_4243052_+\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	0.00126171
NZ_CP048875.1\|WP_016472069.1\|4248141_4249011_+\|RNA-polymerase-sigma-factor-SigM	gnl\|CDD\|236604	PRK09643, PRK09643, RNA polymerase sigma factor SigM; Reviewed.	1.89742e-92
NZ_CP048875.1\|WP_016472080.1\|4228203_4229334_+\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	gnl\|CDD\|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	2.68821e-33
NZ_CP048875.1\|WP_016472066.1\|4251535_4251865_+\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	1.91223e-45
NZ_CP048875.1\|WP_164439670.1\|4235838_4237371_+\|DUF2029-domain-containing-protein	gnl\|CDD\|227937	COG5650, COG5650, Predicted integral membrane protein [Function unknown].	5.619e-45
NZ_CP048875.1\|WP_016472079.1\|4229397_4230429_+\|alanine-racemase	gnl\|CDD\|376473	pfam01168, Ala_racemase_N, Alanine racemase, N-terminal domain.	1.29503e-10
NZ_CP048875.1\|WP_003978893.1\|4226172_4226409_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	5.05083e-38
NZ_CP048875.1\|WP_031174646.1\|4245696_4248057_+\|hypothetical-protein	gnl\|CDD\|270875	cd13973, PK_MviN-like, Pseudokinase domain of the peptidoglycan biosynthetic protein MviN. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. This family is composed of the mycobacterial protein MviN and similar proteins. MviN is an integral membrane protein that is essential for growth and is required for cell wall integrity and peptidogylcan (PG) biosynthesis. It comprises of 14 predicted transmembrane (TM) helices at the N-terminus, followed by an intracellular pseudokinase domain linked through a single TM helix to a carbohydrate binding extracellular domain. Phosphorylation of the MviN pseudokinase domain by the PG-sensitive serine/threonine protein kinase PknB recruits a forkhead associated (FHA) domain protein FhaA, which modulates local PG synthesis at cell poles and the septum. The MviN pseudokinase forms a canonical receptor kinase dimer.	8.97815e-53
NZ_CP048875.1\|WP_016472074.1\|4237485_4238832_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.64502e-40
NZ_CP048875.1\|WP_031174644.1\|4238797_4240225_-\|CCA-tRNA-nucleotidyltransferase	gnl\|CDD\|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	0
NZ_CP048875.1\|WP_016472082.1\|4227109_4227400_-\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	2.36176e-40
NZ_CP048875.1\|WP_037612081.1\|4243090_4245562_+\|murein-biosynthesis-integral-membrane-protein-MurJ	gnl\|CDD\|273763	TIGR01695, Putative_lipid_II_flippase_MurJ, murein biosynthesis integral membrane protein MurJ. This model represents MurJ (previously MviN), a family of integral membrane proteins predicted to have ten or more transmembrane regions. Members have been suggested to act as a lipid II flippase, translocated a precursor of murein. However, it appears FtsW has that activity. Flippase activity for MurJ has not been shown. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	1.23968e-152
NZ_CP048875.1\|WP_016472085.1\|4224234_4225581_+\|MATE-family-efflux-transporter	gnl\|CDD\|240541	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli DinF is a membrane protein that has been found to protect cells against oxidative stress and bile salts. The expression of DinF is regulated as part of the SOS system. It may act by detoxifying oxidizing molecules that have the potential to damage DNA. Some member of this family have been reported to enhance the virulence of plant pathogenic bacteria by enhancing their ability to grow in the presence of toxic compounds. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	5.94216e-110
NZ_CP048875.1\|WP_031174641.1\|4231636_4232305_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	5.32068e-17

>NZ_CP048875.1|WP_031174641.1|4231636_4232305_-|PadR-family-transcriptional-regulator
MSRRSGVLEFAVLGLLRESPMHGYELRKRLNTSLGVFRAFSYGSLYPCLKALVQRGWLVEEHSGRPETSPSARAQAGSLAGRRAKIVYRLTAEGKEHFEDLLSQTGPDTWEDEHFGVRFAFFGQTSRDVRMRVLEGRRSRLEERLAKMRASLARTRERLDDYTLELQRHGMESVEREVRWLTELIESERKGSERKSDEHTGRPARETRPDRPAPGPSDNTDR
>NZ_CP048875.1|WP_016472078.1|4230503_4231586_-|inositol-3-phosphate-synthase
MGSVRVAIAGVGNCAASLVQGVEYYKDADPGSKVPGLMHVQFGDYHVRDIEFVAAFDVDGKKVGLDLADAIGASENNTIKICDVPPTGVSVQRGHTYDGLGRYYRETIEESDAEPVDVVQALKDARADVLICYLPVGSQTAVEFYAQCAIDAGVAFVNALPVFIAGTKEWADKFTAAGVPIVGDDIKSQVGATITHRVMAKLFEDRGVILDRTMQLNVGGNMDFKNMLERERLESKKISKTQAVTSQIPDRDLGADNVHIGPSDYVAWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDALRAAKIAKDRGIGGPILSASSYFMKSPPVQYFDDVARQNVQDFIDGKVER
>NZ_CP048875.1|WP_016472079.1|4229397_4230429_+|alanine-racemase
MALSLYVDTDRWRAHQQAVIQQFPGIVPVCKGNGYGFGHERLAEEATKFGADILAVGTTYEAARTKDLFSGDLLVLTPFRKDEEPVPLPDRAVRSVSSVEGVGLMRGARVVIEVMSSMKRHGVTEQDLPRLHAAIDEVRLEGFAIHLPLDRTDGSDAVEEVIAWMDRLRAARLPLHTMFVSHLKPEEFALLQQQFPQTRFRARIGTRLWLGDHRATEYRGAILDVTRVAKGDRFGYRQAKAPGDGWLVVVAGGTSHGVGLESPKALHGMTDRAKGVARAGLATVNRNLSPFVWAGKQRWFAEPPHMQVSILFVPSDAPEPHVGEELTAILRHTTTTVDRTVDR
>NZ_CP048875.1|WP_016472080.1|4228203_4229334_+|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein
MSLTLRTISREQHLAYIQSLPSASHCQVPAWADVKNEWRSENLGWFDTRTGQMVGAGLVLYRQLPKVKRYLAYLPEGPVINWFAPNLDEWLRPMLDHLKKQGAFSVKMGPPVVIRRWDAAAIKKGIQDQDVKRLRDIEATHIEPRAFEVSDKLRRMGWQQGEDGGAGFGDVQPRYVFQVPLEGRSLEDVHKGFNQLWRRNIKKADKAGVQVVQGNMANPYDLDEWQRLYEITAERDKFRPRPKAYFQRMWNVLNAEDPHRMRLYFAEHEGERISAATMLIVGGHVWYSYGASANHKREVRPSNAMQWRMLQDAYALGASVYDLRGISDSLDENDHLFGLIQFKVGTGGQAAEYLGEWDFPLNKLLHKALDIYMSRR
>NZ_CP048875.1|WP_016472081.1|4227665_4227968_+|hypothetical-protein
MAQAVRWNNPLSYLNSDGRRHPVENSFATVTLVLGVIAVVCAWWQGLHVLGSVVGLAGVLTGAWGQYISATTGERFVTIIGLGAAGAGFYINMMHGGFLI
>NZ_CP048875.1|WP_016472082.1|4227109_4227400_-|30S-ribosomal-protein-S6
MRHYEVMVILDPDLEERAVSPLIESFLSVVREGNGKVEKVDTWGRRRLSYEINKKPEGIYSVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPSTH
>NZ_CP048875.1|WP_016472083.1|4226430_4227006_-|single-stranded-DNA-binding-protein
MAGETVITVVGNLVDDPELRFTPSGAAVAKFRVASTPRTFDRQTNEWKDGESLFLTCSVWRQAAENVAESLTKGTRVIVQGRLRQRSYEDREGIKRTVYELDVDEVGASLRNATAKVTKTSGRGGQGGGGFGGGGGQGGGWGGGPGGSQGGAPAGDPWATGAPAGGGQGGGGGWGGGPGGNGGGYSDEPPF
>NZ_CP048875.1|WP_003978893.1|4226172_4226409_-|30S-ribosomal-protein-S18
MAKPPARKPKKKVCVFCKEKISYVDYKDTNLLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPYTSTAR
>NZ_CP048875.1|WP_016472084.1|4225707_4226154_-|50S-ribosomal-protein-L9
MKIILTNEVSGLGAAGDVVEVKDGYARNYLVPRGYAIRWTKGGEKDVEQIRRARKIREIATIEQANEIKTQLEGLNVGLKVRAGDQGRLFGSVTPADVADAIKASGGPDVDKRRIEVGSPIKSLGAHQVTIRLHADVAATVEVNVAAA
>NZ_CP048875.1|WP_016472085.1|4224234_4225581_+|MATE-family-efflux-transporter
MSSASPTGRTDVRRHDREIIALALPAFGALVAEPLFVMVDSAIVGHLGTPQLAGLGVAAALLQTGVNIFVFLAYATTAAVARRLGADDLPAALRQGMDGVWLALLLGLAVIAVAVPTAPWLIDAFGASATAAPYGTTYLRVSALGIPAMLIVLAATGVLRGLQDTKTPLYVAVGGFSANAALNALLVYGAGLGIAGSAWGTVIAQWGMAAVYLTVVIRGARRHGASLRPDLAGIRASGRAGVPLLVRTLSLRAVLMIATAVAARLGDADIAAHQITLTLWSLLAFALDAIAIAGQAIIGRYLGASDAAGARAACRRMVQWGVLSGVVLGLLVALVRPLFMPLFTTDADVIHQLTPVLLVVAVTQPVAGVVFVLDGVLMGAGDGPYLAGAMLVTLAVFAPVALLVPVFGGGLTALWWTVAGVMMGTRLITLALRARSGRWAVTGAVRAR
>NZ_CP048875.1|WP_164439670.1|4235838_4237371_+|DUF2029-domain-containing-protein
MTSAPTARNSSEPSRPAAEGDSPDTSFPVRPTDQDEVAAAASEVVGGRAGRRALHGSGWWTPVRAVVAVALGMFALGMLQKVPCLDDAWFSGQTAQYVHACYSDIPHLYTGRGFADGLLPYFDHLPDRISGGMEYLEYPVLTGAFMQIAAMLTIGGDSLRQDQQLYWVVNSVMLMVCTAVLVVCAVRTHRNRPWDAMLVALAPALALTATINWDLLAVAMTAAGMLLWSRSRPLAAGVLIGLATAAKLYPVLLLGPLLVLCWRAGRWGAFFRAAGGAALSWLVVNVPVMVLAPDGWAKFYTFSQERPVDFGSLWLVIQQRTGNPLGDANVYAIILMVLGCAGIAALALCAPRRPRFAQLAFLVVALFILTNKVYSPQYVLWLIPLAALARPKWRDFLIWQGCEVLYFVGIWMYLAYTGSGDKRQGLPEDGYQLVILAHLLGTLFLCLMVVRDALRPEHDPVRRDDGSDDPGGGVLDEAPDVFTLGARNEVQLRTGAGTSLPAQLVRRGAE
>NZ_CP048875.1|WP_016472074.1|4237485_4238832_+|MFS-transporter
MSVARDLRALLRFPDFRKLLTVRLLSQLADGVYQVALAAYVVFSPEKETSPAAIASALAVLLLPYSLLGPFAGVLLDRWRRRQVLFFGNVLRTVLASVTAAFVLGAVPDWLVFLSALTVTAVNRFVLAGLSAALPRVVDGERLVLANSISPTAGTLAATLGGGVAFVVRFLAPGTGRSSDALVLLTGAGIYLLSGLAALRLGKNQLGPDPSEVQPRVLAAVASTARGLLAGMRHLGARPTAAYALGAVTLMRFCYGALTVTVLMLCRYAWNGADSAEGGLGLLGLALGLSGLGFFAAAVLTPAAAGRLGVFRWMALCAGAAAVLEPALGLPFAPVPTLTAAFVLGLVTQASKIATDTAVQTSVDDAYRGRVFSLYDMLYNVAYVGAAGVAALMLPPDGRSAAVVLGVAVLYAVIALAVLRVSRETTTLGGGGEQSEPVSPAAGPPTTS
>NZ_CP048875.1|WP_031174644.1|4238797_4240225_-|CCA-tRNA-nucleotidyltransferase
MAEQLSEVQRRAVSELLRVSPVADELARRFREAGYRLALVGGSVRDALLGRLGNDLDFTTDARPEDVLRIVRPWADAVWEVGIAFGTVGIKKSDFVLEVTTYRSEVYDRTSRKPEVSYGDTIEEDLVRRDFTVNAMAVALPEKQFVDPHGGLEDLAARRLRTPGTPESSFSDDPLRMMRAARFAAQLDFDLAPEVVTAMTQMADRIEIVSAERVRDELNKLLLGRWPRKGLRLLVDTGLAARVLPELPALRLERDEHHRHKDVYEHSLTVLDQAIDLEDDGPDLTLRLAALLHDIGKPKTRRFEKDGRVSFHHHEVVGAKMAKKRLTALKYPSEMIKDVSRLVELHLRFHGYGTGEWTDSAVRRYVRDAGPLLERLHKLTRSDCTTRNKRKAQALSRAYDGLEERIARLKEQEELDAIRPDLDGNDIMRELGIKPGPAVGRAYKHLLELRLEHGPLGHDAAVAELRKWWAAQQQG
>NZ_CP048875.1|WP_037612080.1|4240562_4243052_+|hypothetical-protein
MDERVAEAAERQAPPGRRGTNRWRRRATALLLAALPALGSTLPAAAPATAAPASPTAAQSTTAQSAAHRATTQAAAGRTAATTAAAALQGTGSRSARVSVNEVTPAVPAAGDTLTLSGTVTNTSGSTLSHLEIAPRIGPTLGSRSAIEQAGRRQGYLSGADGTEVSGGHRVKLSGLAPGITRSFALKIPVSDLHLGADGVYQLGVSLTGQTRTRPYPQVLGIGRTFVPWHKKNTASRTRITYLWPLISKPHVTARTQSDEQQTPVFRDESLAKELAPGGRLQEMLELGKDLDVTWVIDPDLLASVDMMAGRYRVLKPGGTPDDTVAGKGQEYAQHWLDELQRAVRGKDVVTLPFADPDLASLAHRGTTVRGALGSLSHATTLARNTVETVLHVKANTDFAWPYEGAVDTSVVDVATSAGAHNVIARSDSVRDPGLSYSPTAARPIGSGTTALVADARLSTAFEGDLSRAGASSLAVQQFLAQSLALADQAPSRTRSIVVAPQRMPSVSQAQAMAAGVKALSDSSWAGTADLTDAAEATPDPRAQRRMPAPSSYPASLRRSELPTAAFEQVRKTKEGLDDFKAILDTPERVMPPFSTAIDREVSNAWRDHSGSARDYRDSVEEYLLELRGAVKLIKKSDITLSGREATIPVTVQNNLAQGVDGLVLELRSSRVGLDVGDRKRVKVDGEHTQSLKFDTTAKNNGRAYVYAQLYTEDGEPYGKVMRFQVNVTSITSTVLLVIAGGVLLIVLAGIRMYTQRKRSGPAPDPDAPLEEPDGEEDGDGKDGDAPAEEPDEDRQEKADGTATAGSGEGDDTVRENDNPPATGEKVDR
>NZ_CP048875.1|WP_037612081.1|4243090_4245562_+|murein-biosynthesis-integral-membrane-protein-MurJ
MNAPYGDDRGHAPGDGSGQPEDPYARDAYGRDPYEDRAPSPQDPQPWQHHPQGGQQPRTAQPQGQYPQNGPAQGQGPHAQPGPQPQQPYHDQRPHQGQQPYRGQQGQSQSQSQGQGQPQDRQPYSAQGYRGEQYPQAPQTAQTPQAPRSPQAPQAPQQGDAFAHLYRDQGHPQPQQPHPPQQSRPSPYQQQQQNPQYPQNPQHAQAPHHGRRPAPAPQGTPATQVTQPLQAVQPPQPYPPEPGAPGAAEEPSAQTVNLGTVPGKEPEAPAEGAPDSGKGGGGGLLKSSAIMAAGTMVSRLTGFVRSAMIVAALGASALGDSYQLAITLPTMLYILTVGGGLNSVFVPQLVRSMKEDDDGGEAYANRLLTLVAVILGVMAAAAVFAAPLLVRMMSVKLAGDPAANEVTVTFVRYCLPSIFFMGIHVVMGQVLNARGRFGAMMWTPVLNNIVIIATISMFLWVYGSAATSRLNVTTIPPEGVRLLGVGTLLGLVVQSLAMFPYLRAAGFRIRPRFDWRGHGLGKAAKLAKWTILFVLANQAGVLVVSQLSTWAGDTAARNGDPGTGYIAYSNAQLIWTMPQSIITVSVMAALLPRLSRAAADGDPGAVRDDISQGLRNSAVAIVPIAFGFVALGIPMCTMIYGSAGVDAARSMGYMLMAFGVGLIPYSVQYVVLRAFYAYEDTRTPFFNTVIVAAVNAAASALCFLLLPARWAVIGMAASYGLAYLIGVGIAWRRLRDRLGGDLDGRRVVRTYIRLAGASIPATLAAGAAAWGITRALGSGTFGSIAALIGGGIVLGAVFVLAAKRMRIAEMTAMLGMVRARLGR
>NZ_CP048875.1|WP_031174646.1|4245696_4248057_+|hypothetical-protein
MAERSTAAVDVAETSGMNGTPLPARLGGATSDGATDATNGHSRGTGAPAPAAPTPIPSGTAFAALSRDAGDSTPPDETSAQDPAGAGAGHSSGKTVGPEDGSSAHTGPKSTTTATPTPAAPRADNPAGKDRPADDSTDTADTADATGASGEEGGGGSADAGDSAPKNGGAAEQPKPDAEKDSAAKDSSEKPDPEQSGAKKGDKSDAANASAPAGTSPETSATASAKDADGDTDSDTDRNDADSDSADATGKSSPDEEAGSRKDSGKSAASPAAVELRVPELHSGHKLARRYRLEECVTRLDGFSSWRAVDEKLRRAVGVHVLPAGHSRARQVLSAARSAALLGDPRFVQVLDAVEEDDLVYVVHEWLPDAVPLSEVLTTRPLEAHEAYQLVGQLSQALAAAHREGLAHLRLNPTCVLRTGMGQYRIRGLAVNAALRGVTSENPQRDDTEAIGALLYAALTQRWPYEEDAHGLPGVGSLDMSTLAAPEQVRAGVHRGLSTLAMRALVNDGATASRQEQPCTTPDELAKAVSALPRIRPPEQAFPVPPPFPRAAYQQGAAQGAGGAAGRAATAPRAEPPTPPTLPGRTGKVLKWGVSALLIAALGLGSWQIADALLSSDTPEKKTTKNVQAHDTSAHDTGKPIKIEDIKDFDPQGDGSENPDKVGDAIDGKPGTYWLTSKYIGHADFGNLKSGAGLILDLGKARQVSSLKVDFIGKTSVSFLAAPSSVTSMPTSLGSFSKVTSGSGEHVTLKAKKPIKTRFVLVWLTKLPLSEDGNYRGRVTEVQVLS
>NZ_CP048875.1|WP_016472069.1|4248141_4249011_+|RNA-polymerase-sigma-factor-SigM
MASDDKERDKQLLARHVAGDPDAFGELVRRHRDRLWAVALRTLGDREEAADAVQDALISAYRAAHTFRGQSAVTTWLHRITVNACLDRARKTASRRATPTDDTERLEQVLEPHESAAGPVERQDVRRQVVAALSELPAEQRAALVLVDMQGYPVAEAAEVLDVAVGTVKSRCARGRARLLPLVSHLRPGRRREDKETKGKGSEAKGTETKGTEGKGTPGKGTKEKGAPKKEPQENPTARTGGAGSGGDGGGNPAAGTSVPAPRGAQRKSPQHTAQGTTGSGAVKGGGQA
>NZ_CP048875.1|WP_016472068.1|4249007_4250402_+|hypothetical-protein
MTSAPFPYDERPGTENRQPGDGRPDRDEHPDVEEISAFGEGISPAARAPQIRSHLAECPQCAGVLASLEEIRETLGTLSGPVRMPEDVADRIDAALAAEAAKAGASPEAASATEPPSTEPSTKTPGTTTPGTAAPGTAKGAAPETSPGSDSDASPNAAPEAMPDPTPDASVPHGTVSRETTTEDEPSDRTPEARPGKDSGVSRETNSTPSAEAASKRRRPTTDRPPGRAASATGPGTPGPDRKGTSAAGRGSSGPTPQRARRRRRAVFAVVASVAALTVGGVALQALSGSPATEVASDAARPTPEQHVPGASPLGPSTGAPQGDDSGSGDDKQLRKRVQRLLSGQHTPSPSASPRSSAPSRPSEPPSPGTRKSPDTGQNTLRDDALGGGQTVPSCVRDAIGRAEPPLAVDPEATFHHRSGYLVVLPHQGGDTRRADAYLVDPSCISVDPPQPGRVLYKGTYARG
>NZ_CP048875.1|WP_016472066.1|4251535_4251865_+|thioredoxin
MAGATVTATDADFDDVVLKSDKPVLVDFWAAWCGPCRQIAPSLEAIAAENADKLTVVKLNIDENPGVAAKYGIMSIPTMNVYQGGEVVKTIVGAKPKAALEKDLADFIG
>NZ_CP048875.1|WP_031174649.1|4251953_4252574_-|GNAT-family-N-acetyltransferase
MGRQLVPLTLDNLADLPERCRACAFWELGPVSDEETTASRRPDLEKEGWISSVLLEWGSCGRVVYVDDAPVGYVLYAPPAYVPRSFAFPTSPVSPDAVQLMTAYLLPEFQGQGIGRVIVQTVAKDLLQRGFKAVEAFGDARWSEPSCLLPADHLLAVGFKTVRPHQRFPRLRLELRSTVSWRQDMERALDQLLGKVHSKEPALRPL

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Crispr_ID: NZ_CP048875_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_12

4312874-4312986

Orphan

Consensus_repeat	Method
GGCCACCCGGCTGTGCGGCCACCT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP048875_12

>merge|NZ_CP048875|12|4312874-4312986|CRISPRCasFinder
GGCCACCCGGCTGTGCGGCCACCTTGGTCATCCGGTTGTGCGGCCACCTGGCCATGTGGTCACCCGGCTGTGCGGCCACCTGGCCATGTGGTCGCCCGGCTGTGCGGTCACCG

>NZ_CP048875|12|11|4312874-4312986|CRISPRCasFinder
GGCCACCCGGCTGTGCGGCCACCT	TGGTCATCCGGTTGTGC
GGCCACCTGGCCATGTGGTCACCC	GGCTGTGCGGCCACCTGGCCATGT
GGTCGCCCGGCTGTGCGGTCACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_030406628.1\|4322824_4323334_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP048875.1\|WP_016472023.1\|4300626_4300974_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP048875.1\|WP_164440341.1\|4324227_4325919_+\|phenylacetic-acid-degradation-protein-PaaN	unknown	unknown	gnl\|CDD\|143445
NZ_CP048875.1\|WP_016472018.1\|4305176_4305461_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-B	unknown	unknown	gnl\|CDD\|237504
NZ_CP048875.1\|WP_135567216.1\|4311847_4312828_-\|NAD(P)H-quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|176180
NZ_CP048875.1\|WP_030406636.1\|4309819_4310386_-\|bacterial-proteasome-activator-family-protein	unknown	unknown	gnl\|CDD\|378489
NZ_CP048875.1\|WP_164439684.1\|4320248_4321325_-\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223101
NZ_CP048875.1\|WP_031174669.1\|4321321_4322575_-\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|213783
NZ_CP048875.1\|WP_164439681.1\|4314517_4314685_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439679.1\|4302394_4303465_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|131215
NZ_CP048875.1\|WP_016472019.1\|4304445_4305180_-\|phenylacetate-CoA-oxygenase-subunit-PaaC	unknown	unknown	gnl\|CDD\|368300
NZ_CP048875.1\|WP_164440340.1\|4307586_4308915_+\|HTTM-domain-containing-protein	unknown	unknown	gnl\|CDD\|214802
NZ_CP048875.1\|WP_016472005.1\|4318614_4320249_-\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
NZ_CP048875.1\|WP_164440339.1\|4303468_4304008_-\|phenylacetate-CoA-oxygenase-subunit-PaaJ	unknown	unknown	gnl\|CDD\|131214
NZ_CP048875.1\|WP_164439680.1\|4308924_4309758_+\|TrmH-family-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|334162
NZ_CP048875.1\|WP_164439683.1\|4317594_4318611_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133000
NZ_CP048875.1\|WP_016472008.1\|4314767_4315859_-\|potassium-channel-family-protein	unknown	unknown	gnl\|CDD\|367001
NZ_CP048875.1\|WP_030406639.1\|4306930_4307569_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016472001.1\|4323450_4324056_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_CP048875.1\|WP_164439682.1\|4315852_4317598_-\|molybdopterin-molybdenumtransferase-MoeA	unknown	unknown	gnl\|CDD\|238452

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_030406628.1\|4322824_4323334_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.94516e-30
NZ_CP048875.1\|WP_016472023.1\|4300626_4300974_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.96973e-26
NZ_CP048875.1\|WP_164440341.1\|4324227_4325919_+\|phenylacetic-acid-degradation-protein-PaaN	gnl\|CDD\|143445	cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.	0
NZ_CP048875.1\|WP_016472018.1\|4305176_4305461_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-B	gnl\|CDD\|237504	PRK13781, paaB, phenylacetate-CoA oxygenase subunit PaaB; Provisional.	4.281e-63
NZ_CP048875.1\|WP_135567216.1\|4311847_4312828_-\|NAD(P)H-quinone-oxidoreductase	gnl\|CDD\|176180	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NZ_CP048875.1\|WP_030406636.1\|4309819_4310386_-\|bacterial-proteasome-activator-family-protein	gnl\|CDD\|378489	pfam10759, DUF2587, Protein of unknown function (DUF2587). This is a bacterial family of proteins with no known function.	3.82261e-90
NZ_CP048875.1\|WP_164439684.1\|4320248_4321325_-\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	1.32141e-155
NZ_CP048875.1\|WP_031174669.1\|4321321_4322575_-\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	gnl\|CDD\|213783	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit. Members of this protein family are the alpha subunit of the E1 component of pyruvate dehydrogenase (PDH). This model represents one branch of a larger family that E1-alpha proteins from 2-oxoisovalerate dehydrogenase, acetoin dehydrogenase, another PDH clade, etc. [Energy metabolism, Pyruvate dehydrogenase].	4.11776e-164
NZ_CP048875.1\|WP_164439679.1\|4302394_4303465_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|131215	TIGR02160, 12-phenylacetyl-CoA_epoxidase_subunit_E, phenylacetate-CoA oxygenase/reductase, PaaK subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	1.17532e-120
NZ_CP048875.1\|WP_016472019.1\|4304445_4305180_-\|phenylacetate-CoA-oxygenase-subunit-PaaC	gnl\|CDD\|368300	pfam05138, PaaA_PaaC, Phenylacetic acid catabolic protein. This family includes proteins such as PaaA and PaaC that are part of a catabolic pathway of phenylacetic acid. These proteins may form part of a dioxygenase complex.	1.72445e-90
NZ_CP048875.1\|WP_164440340.1\|4307586_4308915_+\|HTTM-domain-containing-protein	gnl\|CDD\|214802	smart00752, HTTM, Horizontally Transferred TransMembrane Domain. Sequence analysis of vitamin K dependent gamma-carboxylases (VKGC) revealed the presence of a novel domain, HTTM (Horizontally Transferred TransMembrane) in its N-terminus. In contrast to most known domains, HTTM contains four transmembrane regions. Its occurrence in eukaryotes, bacteria and archaea is more likely caused by horizontal gene transfer than by early invention. The conservation of VKGC catalytic sites indicates an enzymatic function also for the other family members.	1.12622e-30
NZ_CP048875.1\|WP_016472005.1\|4318614_4320249_-\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	1.40103e-115
NZ_CP048875.1\|WP_164440339.1\|4303468_4304008_-\|phenylacetate-CoA-oxygenase-subunit-PaaJ	gnl\|CDD\|131214	TIGR02159, Putative_12-phenylacetyl-CoA_epoxidase_subunit_D, phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	1.00458e-49
NZ_CP048875.1\|WP_164439680.1\|4308924_4309758_+\|TrmH-family-RNA-methyltransferase	gnl\|CDD\|334162	pfam00588, SpoU_methylase, SpoU rRNA Methylase family. This family of proteins probably use S-AdoMet.	4.44162e-34
NZ_CP048875.1\|WP_164439683.1\|4317594_4318611_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	7.96536e-28
NZ_CP048875.1\|WP_016472008.1\|4314767_4315859_-\|potassium-channel-family-protein	gnl\|CDD\|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	9.70757e-25
NZ_CP048875.1\|WP_016472001.1\|4323450_4324056_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	2.94517e-19
NZ_CP048875.1\|WP_164439682.1\|4315852_4317598_-\|molybdopterin-molybdenumtransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	9.62268e-94

>NZ_CP048875.1|WP_135567216.1|4311847_4312828_-|NAD(P)H-quinone-oxidoreductase
MHAITIPEPGGPEALVWAEVPDPEPGEGEVVVDVVASAVNRADVLQRQGFYDPPPGSPAYPGLECAGRISAVGPGVAGWAVGDEVCALLGGGGYAEKVAVPSGQLLPVPEGVDVAAAAGLPEVTCTVWSNVFMVAHLRPGETLLVHGGSSGIGTMAIQLAKAVGARVAVTAGTAQKLERCAELGADILINYREQDFVEELRAATDGAGADVILDNMGAKYLERNVKALAVNGRLAIIGMQGGSKGELNLGALLAKRGAVTATSLRARPADEKAAIVAAVREHVWPLIADGRVRPVVDSTVPMWNAAQAHRTLDESTHIGKILLTTG
>NZ_CP048875.1|WP_030406636.1|4309819_4310386_-|bacterial-proteasome-activator-family-protein
MTQPSNEQSQESPQVLVVGPDGMALGSTAAKGGDGEGDEQAEVPVTEMVEQPAKVMRIGSMIKQLLEEVKAAPLDEASRARLKEIHTSSIKELEDGLAPELIEELERLSLPFTEDSTPTDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLEQMRRALPAGAMPQDEAAQANEAQRRTGGPYL
>NZ_CP048875.1|WP_164439680.1|4308924_4309758_+|TrmH-family-RNA-methyltransferase
MTRKDEQAERTAPAGTAASEEAVEPVTAEWARHAADGVLLDGFHALKHALRFGARVPVAVTTDRPAVRELARSLAPDLLDVLDGLLREVPEATLRGLVPRAHPTGVAALALRSSAPDWDGAGDGVPGPGAGAGAQEGAPLVVLDNPRNLGNVGAVVRLAAGAGAAGVLTTGDLDPWHPAAVRAGAGLHFAVPVARRQVGRLPRRPLLAFDPEGDDLRSVPLPPGAMLAFGSERHGLTDALRDRADHLVALPMRPQVSSYNLATSVAMALYHWMARPS
>NZ_CP048875.1|WP_164440340.1|4307586_4308915_+|HTTM-domain-containing-protein
MVRSGPRAWLERCVSRGLSKVTTYALGPYQTAIVRIGFGTAWLLFLLRELPHRHELYGPDGPWSFGLGKQLIETNRAFTVLLWSSSDSWFELVYVLAMASAAAMVLGWHTRVSSVVFMVGVLSLQNRSVFMGDGGDNVIHLMSMYLVLTRCAQVWSLDARRARRARERAAAEGLPVPANAVAATGGVVLWAVLGAVLLGGTFAGALSTGWALFFWALWAVHGLWWGLEKAAGSGGATVREARAVGDILANLAHNGVLLVIMVEVCLVYSTAGWYKIQGSRWQDGTAVYYPMNLDYFTPWPALSHLLAGSGLMIFLVTYGTVFTQVAFPFTLFNRRVKNVLLAAMIMEHIGIAVLLGLPFFSLAMIAADAVFLPTVFLMWTGRHVTALGGRVRRLLPGGRKDPAPAAPGGPPGGGPGVPEQTRHQVTWPATEPASDGPGPGRP
>NZ_CP048875.1|WP_030406639.1|4306930_4307569_+|hypothetical-protein
MRGIAALSLPARVFVAIAVAVVTVGVAFHVAMVFLQTAPDNTISKRHADVVDAYVYPEFERNWKLFAPNPLQQNVAVHARARIAKDDGTTETTGWVNLTAMDGKAIHGNPAPSHTQQNELRRAWEFYADYHDDNGLPVGLRGRLSEQYLKRIVMMRFGAELNGGSVERIQVRSAVTPVAPPAWSEEKADIKTQYAVQPWWQVTSADLPGGAE
>NZ_CP048875.1|WP_016472018.1|4305176_4305461_-|1,2-phenylacetyl-CoA-epoxidase-subunit-B
MSADWPLWEVFVRSRRGLSHTHAGSLHAPDAQMALRNARDLFTRRSEGVSLWVVPAAEITASSPDEKDPFFAPAADKPYRHPTFYEVPEGVRNL
>NZ_CP048875.1|WP_016472019.1|4304445_4305180_-|phenylacetate-CoA-oxygenase-subunit-PaaC
MSTHPAGHPVGALATLPLGDDALVLSHRLGEWAGHAPVLEEEVALANIALDLLGQARALYAGLADVLGSEDEIAYLREEREFRNCQLVEQPNGDFAHTIVRQLFFSAYQLPLYDRLSPSLPLAAKAVRETAYHRDHAEQWTLRLGDGTEESHTRTQRAADALWRFTGELFQPVEGLDVPWQELEAEWTADVRDVFDRAGLTVPETPRHGAWSAGAGRQGLHTEPFGRMLAEMQHLHRSHPGATW
>NZ_CP048875.1|WP_164440339.1|4303468_4304008_-|phenylacetate-CoA-oxygenase-subunit-PaaJ
MAGTVPDPELPVVTLAELGVLRRVAEPEPGRILVELTPTYTGCPAVEAMAADIERVLTGAGAARVEVRTVLTPPWSTDDISAEGRRKLAEHGVAPPRAGARSRGPVPLTLSATRRTSGDSEGSGGRPATRRTLPGEEPVRCPRCGSAETRLLSRFSSTACKALRRCESCLEPFDHFKEV
>NZ_CP048875.1|WP_164439679.1|4302394_4303465_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MPSFHPLRVQAVERLTDDSAALTLAVPPELRDTYGYAPGQHLTLRRVNEKGEEIRRTYSLCAPARPRPETLRVGIRLVEGGEFSTYALKELSEGGVVEALPPRGRFVLEPRPGRFAAVVGGSGITPVLSIAATLLATEPASRFCLIRSDRTTASTMFLEEVADLKDRYPDRFHLVTVLSREEQHSGLPSGRLDRDRLSALLPALLSPEGVRETDGWYLCGPLGLVEGAAMALRTLGVPRARVHQEIFHADATAPARPVATGAVTGSAAVSATLGGRGGCWPAREGETLLETVLRNRADAPYACKGGVCGTCRARLLGGEVHMDRNFALEDEEVEAGYVLACQSRPLTPQIALDFDA
>NZ_CP048875.1|WP_016472023.1|4300626_4300974_+|rhodanese-like-domain-containing-protein
MNAFPGQVPQIDAASVPSDALLLDVREDDEWAAGHAEGALHIPMSDFVGRQGELTERLGEGERVYVVCRVGGRSAQVAAYLAQQGIDAVNVDGGMLAWESAGRPLVGDADSAFVR
>NZ_CP048875.1|WP_164439681.1|4314517_4314685_-|hypothetical-protein
MDPPPTCPNCPERLLWKDTRETGPGKEDSWFWFCSGCHQAYVPTPDQKLRFTYAS
>NZ_CP048875.1|WP_016472008.1|4314767_4315859_-|potassium-channel-family-protein
MVKRLYGVAQESEDEAEQHGAVVLPTFGASPLRQVLRRLLAAFVVLWVTVLLVYIDREGYRDAADDGMSFLDCVYYTTVTLSTTGYGDITPASDSARLVNALVITPLRVLFLIILIGTTLEALTDRTRQQWRLNRWRSALRDHTVVVGYGTKGRSAIQTLLSTGLVRDQVVVIDTHPQVVKAANGEGFAGVEGDATRSQVLVRAQVQRAKQIVIAPQRDDTSVLVTLTARQLNPRIKIVAAVREEENAPLLRQSGADQVITSASAAGRLLGLAMLSPNASSVIEDLIQQGSGLDLKERPVTKAEAGRSPRECDDLVVSVVRGHRILPFDDPEAASLQLTDRLVVIHRASRPLPDGDERRGEYR
>NZ_CP048875.1|WP_164439682.1|4315852_4317598_-|molybdopterin-molybdenumtransferase-MoeA
MSGSDELDEAIALANSGRARPTPPPAPRLKRIRRIRWDDWENLDEDEFDPGPGEDEEGEGEQPAWAGQGARSGTAPGQGPARGGHPGDTRHGDQDTGGRNAGNRGKGDQGTGGRSGEARPGGAPSPGAPSYDAHPADSRADAGTDTGGTARRTASRESASREARHTAPRQHGDRSRVSAATWSEAVATAAGAADALPSATVPLDRALGHTLAAAVTALTDLPPFDTSAMDGWAVCGPGPWVPARTADGAERPGLLAGDRSEPPQLADGEAIRIATGARVPPGTSAVLRWEAAERIGGARLRSPSPPQAGADIRPRGQECREGDALLPPGRIVTPPVLGLAAAAGYDELEIVPRPRAEVLVLGDELLHSGLPRDGRIRDALGPMVGPWLTALGAEVVATRMLGDDAEALHEAVSGTTADLIVTTGGTARGPVDHLQPTLRRMDARLLVRGVRVRPGHPMLLAALRPQQGRRRGSHLVGLPGNPLAALSGLVTLAAPLLRALAGRAEPELRKATLGAEVSGHPRDTRLVPVRHEGSGIRARIRPLRYAGPSMLRGVASCDALAVVPPGGAAPGEDVPLVELPW
>NZ_CP048875.1|WP_164439683.1|4317594_4318611_-|NTP-transferase-domain-containing-protein
MTQPPAPPSARRQQYGPGGAPRPYAALVLAGGDARRLGGVDKPAVTVGGRTLLDRVLAACADAAATVVVGPRRPSCRPVVWAREDPPGGGPLAALRAGLEALGEDGGGPDGAAGRTPVLVVSADLPFLDAATVGTLVTVPEDAEGVVLHDGRDQPLLAAYRMEPLRRELALLRTEYGHLSGLPLRLVLQGLRLHRAAALSAPSLAAAAFDCDTWDDIVTARARIREHDRVLDEWIAAAKAELGIELNVDTTVLLDLARDAAHGVARPAAPLTTFLAGYAAGRAGGSSVDVDEAAAALTRLARRWAAEADGTGGRGGTTDADGTTGNDETGTAGNTGER
>NZ_CP048875.1|WP_016472005.1|4318614_4320249_-|2-oxo-acid-dehydrogenase-subunit-E2
MGEVRQFALPDLGEGLTEATIVRWLVAVGDTVRVDEPVVEVETAKALVEVPCPYAGVVTSHAAEEGAEVAVGAPLVTVAVGPENGAPGSGPDGDAAPRTEDATPDHTPGTAAEAVTGPAAGRTAPPDPEHVGGSGNVLVGYGTAPAPGRRRRVLPSSLAGPVSPSPARAAGAGPRADGTPHNGTDRSTRAHPDRRGASRANGDARTPVPVISPLVRRLARENSLDLSRVTGSGPDGLILRADVERALRTAVPEGAPADPHSPPPAPTGTAAREGTRSGADGVRGDARTVPGDADGVPGADDVRNAVGSVRHERRIPLRGVRGTAAARLSRSRSEIPDASCWVDADATELLAARARMNAAPGHGGQVPPVSLLALLARVCTAALARFPELNATVDTEAREIVVLPEVHLGFAAQTDRGLVVPVVRDAHTMTAEELTAETARLTEAARAGRLSPAELTGGTFTLNNYGVFGVDGSTPIINHPEAAMLGVGRIARKPWVVGDELAVRSVVQLSLTFDHRVCDGGTAGGFLRHVADCVEQPARLLRTL
>NZ_CP048875.1|WP_164439684.1|4320248_4321325_-|alpha-ketoacid-dehydrogenase-subunit-beta
MSTAVRQPPAAGGTAERKPATLGQALRRAMRDAMADDPDVHIFGEDVGTLGGVFRVTDGLAAEFGPERCADTPLAEAGILGTAVGMAMYGLRPVVEMQFDAFALPGFEQLVSQVSRMRNRTRGRMPMPLTVRVPYGGGIGGVEHHSDSSEAYYMATPGLHVITPATVADAYGLLRAAIASDDPVVFLEPKRLYWAKADWDPEAPEVVPGIGEAVVRRTGTSATLVTYGPSVPVCLEAAEAARAEGWDLEVIDLRSLVPFDEATVTASVRRTGRAVVVHESPGFAGPGGEIAARVTERCFHYLEAPVLRVAGFDIPYPPPMLERHHLPGVDRILDAVARLQWESGWTSRQDTGRGGGAR
>NZ_CP048875.1|WP_031174669.1|4321321_4322575_-|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha
MTVLEQPGTHAPASPPAWRPRTEAGPLLPDAEPYRVLGARTGRLPDGSDGSTAPQDGSGTPTPGAEGAAGAGKVKEPDAELLRRLYAAVVQGRRFNEQATALTRQGRLAVYPSSRGQEACQVAAALALREQDWLFPSYRDTLSAVARGVDPVEVLSLLRGDWHHGYDAHRTRVAPLCTPLATQLPHAVGLAHAARLRGDDVAALALVGDGGTSEGDFHEALNFAAVWRSPVVFLVQNNGFAISVPLAKQTAAPSLAHKAVGYGMPGRLVDGNDAVAVHEVLTEALERARSGGGPTLIEAVTYRLEAHTNADDATRYRTEEEVTAWREHDPVTVLERALRQRGLLDEETVTAAAEAAEQQAADLRARMNTEPRPDPMELFTHVYTEPTAQLREQAAQLRAELAAEQATEGGATGEENR
>NZ_CP048875.1|WP_030406628.1|4322824_4323334_+|Lrp/AsnC-family-transcriptional-regulator
MASGPGRAPEGAEDRAGPRPPARPLDPIDRDILRLLRADGRASIRSVAERVHVSRANAYARINRLLDDGVIRGFSARIDQERAGHGASAYITLKIVQNSWRDVREKLRELPGAAHMALVSGDFDVLLLVHTPDNRALRDLVLTRIQSMPEVLSTRTLLVFEETDLEPDP
>NZ_CP048875.1|WP_016472001.1|4323450_4324056_-|TetR/AcrR-family-transcriptional-regulator
MPTVKRDTYTPDSLLSVAVRVFNERGYDGTSMEHLSKAAGISKSSIYHHVKGKEELLRRAISRALDSLFAVLEEQPAREGRAVERLEHVARRTVEVLIAELPYVTLLLRVRGNTDTEVWAMSRRREFDQRVAALVKQAAADGDLRSDVDARLATRLLFGMINSIAEWYRPDRAPGNGAGGGTSAEVAEAVVRTAFAGLRTH
>NZ_CP048875.1|WP_164440341.1|4324227_4325919_+|phenylacetic-acid-degradation-protein-PaaN
MGTTTAQIVDKHRATLDRALEAIRSREFWTPHPEHPKAYGEEAAKEGKAAFDALRGSRFEIPDQPVSGEWVATEVSPYGIEMDISYPRADEGALDALLPVMRAGLPAWRKAGPEVRAAVCLEILARISERTHEFAHAVMHTSGQAFLMAFQAGGPHAQDRGLEAVAYAYEEQTRTPGRAHWEKPQGKREPLRMEKEFTPVGRGIALLIGCNTFPTWNGFPGFFASLATGNAVLVKPHPRAVLPLALTVRIAREVLAEAGFAADLVALAAEAEGDGIAKNLATRSDIRVIDYTGGSAFGEWLEANARQARVHTEKAGVNTVVIDSTDDYKGMLSNLAFSLSLYSGQMCTTPQNLLIPAEGIDTEAGHKSYDEVVADLGAAVGKLLGDDARAAALLGALVNEQVRQRLEAAPKLGEVALASRTVHNPEFPDATVRTPVIVKVDGTKQDEEAVHLEECFGPVSFAVAVGSTEEALELLRHTLLTKGAMTVSAYTTSPEVASRIEEVCFDEPAQLSLNLTGGVYVNQTAAFSDYHGSGGNPAANCALCDGDFVSGRFRVVEVRRMAG

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Crispr_ID: NZ_CP048875_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_13

4595092-4595214

Orphan

Consensus_repeat	Method
AGGGCCCGGTGTGGGCCTCAGCGTGGGGCGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048875_13

>merge|NZ_CP048875|13|4595092-4595214|CRISPRCasFinder
AGGGCCCGGTGTGGGCCTCAGCGTGGGGCGGGGTCCGGTGCGGGTCTCGTCTCGTGGGGCTGGGCCGGCTGTGGGTCTCGGCCATGGGGAAGGGCCCGGTGTGGGCCTCAGCCGTGGGGCGGG

>NZ_CP048875|13|12|4595092-4595214|CRISPRCasFinder
AGGGCCCGGTGTGGGCCTCAGCGTGGGGCGGGG	TCCGGTGCGGGTCTCGTCTCGTGGGGCTGGGCCGGCTGTGGGTCTCGGCCATGGGGA
AGGGCCCGGTGTGGGCCTCAGCCGTGGGGCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_016471797.1\|4599665_4600076_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
NZ_CP048875.1\|WP_051719315.1\|4605500_4605719_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016471798.1\|4599211_4599655_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP048875.1\|WP_164439725.1\|4596614_4597838_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP048875.1\|WP_164439727.1\|4603984_4605379_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP048875.1\|WP_135567249.1\|4586700_4587795_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|274251
NZ_CP048875.1\|WP_164439720.1\|4589546_4589702_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439728.1\|4605806_4606235_-\|arsenate-reductase-ArsC	unknown	unknown	gnl\|CDD\|319973
NZ_CP048875.1\|WP_016471809.1\|4587821_4588421_+\|class-IV-adenylate-cyclase	unknown	unknown	gnl\|CDD\|143628
NZ_CP048875.1\|WP_016471814.1\|4583866_4584409_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239516
NZ_CP048875.1\|WP_164439726.1\|4598066_4598963_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP048875.1\|WP_164439724.1\|4595259_4596066_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP048875.1\|WP_037613958.1\|4592171_4593101_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NZ_CP048875.1\|WP_164439719.1\|4584405_4585725_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379262
NZ_CP048875.1\|WP_135567248.1\|4585924_4586377_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP048875.1\|WP_164439721.1\|4589937_4590453_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439722.1\|4590846_4591737_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP048875.1\|WP_016471795.1\|4602842_4603955_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439723.1\|4593274_4594795_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239489
NZ_CP048875.1\|WP_164440348.1\|4600321_4602733_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|223256

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_016471797.1\|4599665_4600076_+\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.17657e-41
NZ_CP048875.1\|WP_016471798.1\|4599211_4599655_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	4.39446e-27
NZ_CP048875.1\|WP_164439725.1\|4596614_4597838_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.84216e-32
NZ_CP048875.1\|WP_164439727.1\|4603984_4605379_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	5.89617e-05
NZ_CP048875.1\|WP_135567249.1\|4586700_4587795_+\|radical-SAM-protein	gnl\|CDD\|274251	TIGR02668, moaA_archaeal, probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666). [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	3.94046e-16
NZ_CP048875.1\|WP_164439728.1\|4605806_4606235_-\|arsenate-reductase-ArsC	gnl\|CDD\|319973	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family. Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).	8.66302e-57
NZ_CP048875.1\|WP_016471809.1\|4587821_4588421_+\|class-IV-adenylate-cyclase	gnl\|CDD\|143628	cd07890, CYTH-like_AC_IV-like, Adenylyl cyclase (AC) class IV-like, a subgroup of the CYTH-like superfamily. This subgroup contains class IV ACs and similar proteins. AC catalyzes the conversion of ATP to 3',5'-cyclic AMP (cAMP) and PPi. cAMP is a key signaling molecule which conveys a variety of signals in different cell types. In prokaryotes, cAMP is a catabolite derepression signal which triggers the expression of metabolic pathways including the lactose operon. Six non-homologous classes of ACs have been identified (I-VI). Class IV ACs are found in this group. In bacteria, the gene encoding Class IV AC has been designated cyaB and the protein as AC2. AC-IV occurs in addition to AC-I in bacterial pathogens such as Yersinia pestis (plague disease). The role of AC-IV is unknown but it has been speculated that it may be a factor in pathogenesis, perhaps providing cAMP for a secondary internal signaling function, or for secretion and uptake into host cells, where it may disrupt normal cellular processes. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	3.2472e-20
NZ_CP048875.1\|WP_016471814.1\|4583866_4584409_+\|NUDIX-hydrolase	gnl\|CDD\|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	2.91854e-27
NZ_CP048875.1\|WP_164439726.1\|4598066_4598963_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.03363e-64
NZ_CP048875.1\|WP_164439724.1\|4595259_4596066_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	7.98056e-35
NZ_CP048875.1\|WP_037613958.1\|4592171_4593101_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	3.11738e-61
NZ_CP048875.1\|WP_164439719.1\|4584405_4585725_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	0.00436336
NZ_CP048875.1\|WP_135567248.1\|4585924_4586377_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	7.11351e-13
NZ_CP048875.1\|WP_164439722.1\|4590846_4591737_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.18903e-09
NZ_CP048875.1\|WP_164439723.1\|4593274_4594795_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239489	cd03395, PAP2_like_4, PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	6.08462e-22
NZ_CP048875.1\|WP_164440348.1\|4600321_4602733_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|223256	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair].	0

>NZ_CP048875.1|WP_164439723.1|4593274_4594795_-|phosphatase-PAP2-family-protein
MRERLGDWDRAVFRRVAVTDWPRAEGVLPRLSRTADHSKLWTGTAAVIALSGVGGPRARRGALRGLVAVAVTSALVNTVGKGAFGRSRPVLDEVPVLRRLKRLPTSTSFPSGHAASAAAFATGVALESRGWGAVVAPVAASVAFSRVYTGVHYPSDVLVGAALGTAAAFGVRAVLDARRRVPPAQPLVEAPALPDGRGLSVVANPGSGSAAFVEEVTEALPDARVTRWDPDAGTLPELLEREARRAWEEGGALGVFGGDGTVNAAARAAHRYRVPLAVLPGGTLNHLAQDLGIGSCADLASAVGYGHAIAVDLARFAPPRGAGGAGGAAPEPGFFVNTFSLGAYGDLVEVRDRWRQRIGPWAAGLVAAVHVLRHSRPFEARVNGRTRSLWLLFVGNCSYHTLGGGPGGARRFNLADGMLDVHLVKAGRWARTRLVASALAGVLHRSPVHAAARGRRLHLSGIPEGTLCSYDGETAPSPTALLIDKPAPPLTVYRPLPAWLSGRPLT
>NZ_CP048875.1|WP_037613958.1|4592171_4593101_+|NAD(P)-dependent-oxidoreductase
MSHSPAPTPEGAPSDGASAGRPEVAVLGTGVLGAPIARNLSRSGFPVRAWNRTASKAEALAADGVRAAATPADAVRGARVVLTVLNDGPRVLETMRAAAPGLAPGTVWAQVSTVGEEVADLAAFADEAGLVFVDSPVQGTREPAENGQLVVLAAGPAEARETLRPLFDAIGKRTLWVADDAVGAAHGAASRLKLVLNTWVLALTTGVGETLALAKGLGVDPAHVLDVVTGGPMDNAYFQGKSAAILDGDYTTSFAVDNAAKDARLVLAAAERAGVRMDGTEAARRRLERAAAQGHGEEDMAAGYFASFD
>NZ_CP048875.1|WP_164439722.1|4590846_4591737_+|alpha/beta-hydrolase
MAVVERVTRTVEGAGATLTYDVHGDPAEAGADNPALLLVGSPMEASGFTTLASHFADRVVVTYDPRGTGRSPRTDGAEETTPQEHADDLRRVIEDLGAGPVELFGSSGGAVNGLALVAVRPDLVRTFVAHEPPVPAVLPDGPHALAACEDVHRTYLRSGMGPAMAMFIAVTGRTGPFPENWADEPAPDPAAFGLPTEDDGRRDDPLLGQNMRACTGYRPDFEALAAAARSTRIVLAVGKESEGQLCARAAAATAARLGLEPVVFPSHHAGFLGGEFGQQGEPEAFAATLREVLAAG
>NZ_CP048875.1|WP_164439721.1|4589937_4590453_+|hypothetical-protein
MMRKALAGVVAGAAGTTALNAVTYMDMVLRGRGASSAPEQLVDELSDRTGVPVPGEGETRENRASGTGAVLGMVTGTGVGMVYGLSRALPWRPAVPLAGLLTGLAAMAGSDVPMATLKVSDPRTWKPADWLADIVPHLTYGIVTAAVYEMLAPGCGCGRGCGCGCRAPGRS
>NZ_CP048875.1|WP_164439720.1|4589546_4589702_-|hypothetical-protein
MGRARPDDWALLAQWHGTALIDGDIYWTIARKDVRARRFDQVTVLSCFEGP
>NZ_CP048875.1|WP_016471809.1|4587821_4588421_+|class-IV-adenylate-cyclase
MPQNEYEAKFLNIDVDAVRDQLRAAGAELVFGKTMFTRLIFENDAVQGEQWLRLRDEGGKTTLTLKQVSDATTINGTTEIEIEVDDLDKTAELLKATGLRQVRYQQNYREEWQLGDIKYDLDTWPDLPTFIEIEGPSEDAVRKAVADLGFDYEQARYGSIDLIYKSELGRDILVEPTLLFGDNTHSAHPTAASAGPGLG
>NZ_CP048875.1|WP_135567249.1|4586700_4587795_+|radical-SAM-protein
MIKHPALADVDHAVPVVVTTDRTLRVKVIDSCGMTCSFCHNEGTPVGADNRGHQAGAFAPTGPSGRVSIYAATNGSRFLSEPVLPDEAFRHALTRLRKALDFDEVHLTGGEPTLHPRLPQLVATAKECGYEVSVTSNGENGRRVLADCARAGLDHVNFSVFGTTPEELSQVQHSRYRKPALAQRKIDALNESIRLAMDVGIGTRANVVLPHRSHVPRVHRLLNEYSDNLSVRVLSSLADGERSLQAIDLLLSELQAELEEVRLIAGTSGFRMAYRLPTGRELIVKHIRPLRLPDTCTDCRFNNPTDCEEGYYGVRLYRDTAGEFHVGVCIQRMDLCLPVEEFAAGEACAEVAHLRQADFHNLTA
>NZ_CP048875.1|WP_135567248.1|4585924_4586377_+|ATP-binding-protein
MQFASTARCVSLVRTQVERVLREWGHAPSGIETAVLVASELAANAVVHGHFPGHLFEVGMTSADDICLIEVSDSSPRPPEALKAGINDESGRGLQLVRAVALCTGQRPRRPVGKTVWAKVRMAKPHSRVAAPARLHATSRGAEAVEGRVP
>NZ_CP048875.1|WP_164439719.1|4584405_4585725_-|helix-turn-helix-transcriptional-regulator
MSAPQPYPGLPPELVASPEFRRVCRERDFSQVFQLAKKKAGIYPSRIAALCGMTPSRVGEIMSGRRSLAHIDVIERVADGLRIPGAMLGLAHRPWEIPDGPTVVEQKPVRPVTLPEEGGAAPATGEPSGIDDLLTLADGKVTRSTLFALQSSVEDYWRRDDEHGGASLRPAVVGHLRYVSLLMKGADEALRSDLQSLAAELARLAGWAYFDARQYSTARTHFTQALQLSRGQDDYLFMANVLSCMSLQATYDGNPTDAVALACKAQDSARAAGNDPLVMSMLHMREAFAQAILGDSMACHQAIDRSRDAYEFARGRETEAPAWVRYFDESKLIVDTGIALARLGESARAEPLIAEGLRRESGAQQRGRAFHAFWLATAQLQQGNLDASCESAGMALDLTASLDSPRVAGHVREFHRRLAPYARETPVIVFEQKMREVLG
>NZ_CP048875.1|WP_016471814.1|4583866_4584409_+|NUDIX-hydrolase
MRWTVHGERQIYSNPWVNLWLVDVQQPDGRRWEHHVVKMRHLAVAAVVDEQKRVLMLWRHRFITDTWGWELPMGLIEADETPEQAAAREVEEETGWRVDGMKPLVYAQPANGITDSEHYVFRADGATYAGPPTELNETDRIEWIPISEIRGMIDRREVVSSGSLVGLLYLLLDEATGAAG
>NZ_CP048875.1|WP_164439724.1|4595259_4596066_-|phosphatase-PAP2-family-protein
MSGQHPVESPEESEPSAVGGPPEQLDPRGLLRHLAPVPVPVPAGSEVRRHGGRARRSPLVPLGAGLLASVLVFAAVAYLVLTAEAGFLDRPLMGEAVRHRPAVLDGPMQVVSDVSELPLLVVSVLVALWVSWRAGSWLPVVLVGATGALAALASTAAKELTDRSRPPAKLWQVSEEGFGFPSRHTVVATAVLLVLAYVCAARLRSRAARLSMWTGAGLLCVLCGYSRVHLGVHWPTDVLAGLGLGAAVALLVVTAHAVRNRHADPTHG
>NZ_CP048875.1|WP_164439725.1|4596614_4597838_-|two-component-sensor-histidine-kinase
MSRPLHAVRRALSAVPAEGSSVSRQWVALGVPVALGLADAFLVNGVRPGLELWVSLAAALALLVRWRAPVPVFVVSLVGIYVGYIWFAPMIALYTVTARRRSNVLAVAGAVVLAVAHYLPYPLDGFTPTADREDLLDMVDSCVQAVVPAVSGRWARTRRELRERVRELTVSRHREAELLAERAVITERARLAREMHDVVAHQVSLISVQAGALQMTCQDGTSRELARTVRELAVKTLTELRHMVGALRSGSGAPPGLAPQPRLCDLPALTEGSGLPVTLDLPALPEDAEGGAAWPEAVERAAYRTVQEALTNVGKHAPGARVHVTVRAAEQLTVTVRNGPPPERDTVSGALPSGDEPSLPGGGHGLLGLRERALLLGGTFLAGPTGDGGFLVAAQFPAGTRTGVAGV
>NZ_CP048875.1|WP_164439726.1|4598066_4598963_-|response-regulator-transcription-factor
MIRVVVVDDEELVRSGLRLILGTAPDIEVVAACGGGEAVAAVLEHRPDVLLLDIRMPDVDGLTVLRRLRDVPGAPRTAMLTTFDAEEYLGTALHEGAAGFLLKDTAPEQLVHAVRVLADGGRVLSPGVTPAVIGGYLGHRPDEEAARGVATLTARERQVLALVGEGLSNGEIAQRLDLAHGTVKDHVSALLGKLGGLNRVQAAVIADRAGLVGQVPSHPSAPDGRTARAAAGRRPSASGGAPPRGSRDTGEVARGTAGETAQETTGETAQGTTGKTAQGTTGKTAQGTTGGSSPDGTP
>NZ_CP048875.1|WP_016471798.1|4599211_4599655_+|helix-turn-helix-transcriptional-regulator
MSSRPAAEQRLSDLARLRRVRDRIDREYAQPLDVEALARGVNMSAGHLSRQFRQAYGESPYSYLMTRRIERAMALLRRGDLSVTEVCFAVGCASLGTFSTRFTELVGMPPGAYRRRAEQADGELPSCVTKQVTRPVRNREARRTEPD
>NZ_CP048875.1|WP_016471797.1|4599665_4600076_+|VOC-family-protein
MDLTIHSAFLPHEDPEASLAFYRDTLGFEVRSDVGSGTMRWITLGPAGGTGTSLVLHPPAADPGVTEDERRAIAEMMAKGTYAMIILSTKDLEGTFDRVQASGAEVVQEPTEQPWGVRDCAFRDPAGNMVRINEQR
>NZ_CP048875.1|WP_164440348.1|4600321_4602733_+|excinuclease-ABC-subunit-UvrA
MAPTAQPEAAGPHAAGSHAADSHDVIRVHGARENNLKDVSIEIPKRRLTVFTGVSGSGKSSLVFDTIAAESQRLINETYSAFVQGFMPSQSRPEADVLDGLTTAIIVDQRRMGADPRSTVGTATDANAMLRVLFSRLGQPHIGPPGAFAFNVPSVKASGAMTVERGDKKATKVTFSRTGGMCVRCEGRGTVTDIDLAELYDETKSLSEGAITVPGYKAGGWNHRLYSSSGLFPADKPIRDFTEAELHDFLRREPTRMKIEGINMTYEGLIPRIRKSLLAKDRETMQPHIREFVDRAVTYTDCPACDGTRLSDAARSSKIDGISIADACAMQISDLAAWVGGLDEPSVAPLLTTLRQTLDSFVEIGLGYLSLDRPAGTLSGGEAQRVKMIRHLGSSLTDVTYVFDEPTVGLHPHDIQRMNDLLLRLRDKGNTVLVVEHKPETIAIADHVVDLGPGAGSAGGTVCFEGTVEGLRDSGTLTGRHLDDRAALKKSVRTPTGALKVRGATAHNVRGVDLDIPLGVLVAVTGVAGSGKSSLLHAALKQQPQSAGEAVISIDQSPIRGSRRSNPATYTGLLDPIRKAFAKANGVKPALFSANSEGACPTCGGVGVVYTDLAMMAGVATTCEDCEGRRYQAAVLEHRLGGRDISEVLAMPVAEAEEFFAAGEARTPAAHRILRGLADVGLGYLTLGQPLTTLSGGERQRLKLATHMSAKGGVYVLDEPTAGLHLADVEQLLALLDRLVEGGKSVIVIEHHQAVMAHADWIIDLGPGAGHDGGRIVFEGTPADLVTTRPTLTGHHLAEYVGA
>NZ_CP048875.1|WP_016471795.1|4602842_4603955_+|hypothetical-protein
MAPSARTPRHRVVLVLVSVLVLLGGATLAAYATRTGPFAKDGYCWGAWSEDGGPGVLGDDYARAAETYGTPGRGEAATCVVAFGAPGTEEMRTPDTGLHGAAPGAREGTRGQRLVARVGPPPRATGGPRRAWLAEALPGSAAPLPDGLPGVAGRDHGTLVLPEECDTGHVPLVVTVRADGGAIELGPEQDVAQLLLSLAKTAREKAGCAEGPPMRFTTPVRTAPGEESYDEGRPACRVPGLRLAPRRGDVRGYAGAIGDRLQSCSLELTDKDGDVTARGHFVLTSHPRLVPLFAGMAGGKSPGAGWRGNGRIEGGDGLVTAECRGRPTVFHLHLDGPLARAATPDTRAVFARAADSVTERLGCPPVGPRG
>NZ_CP048875.1|WP_164439727.1|4603984_4605379_+|hypothetical-protein
MNDKPEDTGAGSEPGGRDIPEEPGASRPDEGEAHSPGRPGPEAAAAEPPAAEPPAAEPPRAEAPGNKAPAPGEQRPSTPESPGRLRRLARSRGGTAVIGALVGALLGTGVMAWRADELPFLQRDMCWGSLSPQVAGALFSDTDVRSEELPLRRATEDPMHTECSMQGFGADELESEVTASVRTLGELKGAQAWDWTRQYLSSRMTPLGGDITGMASSQRAWVALPTSCHERSYEPGEDPPLRVVTLASGASDPDYVNEVDARRGLDAMSRAVVRLANGIMERYGCEGGYPDPPKLPGPPEGKSVKALDDDRLCGLEGVELPGWARGKDVSAVRTTPGTKPDGPVRGGVRSCDVGRPFGLDTLRLTTVTDPQLAAVVSRVLGRRADRLGGDGEGAHAGGLSVYTADCQRGRAAFVAWDKEPGEGDDTPPDPRSPGLAVLPSYVKSEARHAGCGDVEVKVPRTPTL
>NZ_CP048875.1|WP_051719315.1|4605500_4605719_+|hypothetical-protein
MAERILISPNGMAHLPDKCNHHPDIGHAEAGWGWVMWPGEGVWGLISEQRPLRATHGRTDRIARVRCRHCVG
>NZ_CP048875.1|WP_164439728.1|4605806_4606235_-|arsenate-reductase-ArsC
MPCTPAASVLFVCVHNAGRSQMAAGFLTHLAGDRVEVRSAGSVPADRVNPAAVEAMREVGIDISGHRPKVLTTEAVQTSDYVITMGCGDACPVFPGRTYLDWELEDPAGRGVEAVRPIRDAIRTRVEALVAEIDAAGPAPTA

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Crispr_ID: NZ_CP048875_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_14

4804834-4804985

Orphan

Consensus_repeat	Method
GTGGTGTTGCCCAGCGCGTCGGTGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP048875_14

>merge|NZ_CP048875|14|4804834-4804985|CRISPRCasFinder
GTGGTGTTGCCCAGCGCGTCGGTGAGTGCGGTGATCAGCCCGTGGGGGCCCCGCCGCACGAGCGTGGTGTTGCCGAGCGCGTCGGTGACGGCCACCGGCAGCCCCGCCGCGTTCGGCGTCACGGTGAGGGTGTGGCCCAGCGGGTCCGTCAC

>NZ_CP048875|14|13|4804834-4804985|CRISPRCasFinder
GTGGTGTTGCCCAGCGCGTCGGTGA	GTGCGGTGATCAGCCCGTGGGGGCCCCGCCGCACGAGC
GTGGTGTTGCCGAGCGCGTCGGTGA	CGGCCACCGGCAGCCCCGCCGCGTTCGGCGTCACGGTG
AGGGTGTGGCCCAGCGGGTCCGTCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_164439791.1\|4801983_4802769_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240166
NZ_CP048875.1\|WP_164439794.1\|4810243_4810459_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_030409133.1\|4808721_4810029_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP048875.1\|WP_164439788.1\|4797945_4799457_+\|citrate:proton-symporter	unknown	unknown	gnl\|CDD\|225407
NZ_CP048875.1\|WP_164439786.1\|4794471_4794921_+\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
NZ_CP048875.1\|WP_164439785.1\|4792782_4794174_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237660
NZ_CP048875.1\|WP_016472953.1\|4807192_4807780_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439797.1\|4814686_4815601_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236600
NZ_CP048875.1\|WP_164439790.1\|4801243_4801954_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP048875.1\|WP_164439796.1\|4813072_4814476_+\|S1-family-peptidase	unknown	unknown	gnl\|CDD\|365866
NZ_CP048875.1\|WP_164439789.1\|4799546_4801247_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225827
NZ_CP048875.1\|WP_016472960.1\|4796247_4796898_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224837
NZ_CP048875.1\|WP_164439795.1\|4810531_4811779_-\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
NZ_CP048875.1\|WP_016472944.1\|4815678_4816137_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP048875.1\|WP_031175361.1\|4811928_4812906_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP048875.1\|WP_016472964.1\|4792255_4792621_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293679
NZ_CP048875.1\|WP_016472959.1\|4796949_4797627_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223489
NZ_CP048875.1\|WP_164439787.1\|4795378_4796071_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370676
NZ_CP048875.1\|WP_164439793.1\|4810057_4810222_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016472952.1\|4807776_4808163_-\|SseB-family-protein	unknown	unknown	gnl\|CDD\|377787

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_164439791.1\|4801983_4802769_-\|hypothetical-protein	gnl\|CDD\|240166	cd05143, Barstar_SaI14_like, Barstar_SaI14_like contains sequences that are similar to SaI14, an RNAase inhibitor, which are members of the Barstar family. Barstar is an intracellular inhibitor of barnase, an extracellular ribonuclease of Bacillus amyloliquefaciens. Barstar binds tightly to the barnase active site and sterically blocks it thus inhibiting its potentially lethal RNase activity inside the cell. The sequences in this subfamily are mostly uncharacterized, but believed to have a similar function and role.	9.63175e-21
NZ_CP048875.1\|WP_164439797.1\|4814686_4815601_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236600	PRK09636, PRK09636, RNA polymerase sigma factor SigJ; Provisional.	1.51913e-71
NZ_CP048875.1\|WP_030409133.1\|4808721_4810029_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.64297e-48
NZ_CP048875.1\|WP_164439788.1\|4797945_4799457_+\|citrate:proton-symporter	gnl\|CDD\|225407	COG2851, CitM, H+/citrate symporter [Energy production and conversion].	4.37495e-86
NZ_CP048875.1\|WP_164439786.1\|4794471_4794921_+\|ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	2.36988e-11
NZ_CP048875.1\|WP_164439785.1\|4792782_4794174_+\|hypothetical-protein	gnl\|CDD\|237660	PRK14289, PRK14289, molecular chaperone DnaJ.	2.87155e-05
NZ_CP048875.1\|WP_164439790.1\|4801243_4801954_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	1.05103e-67
NZ_CP048875.1\|WP_164439796.1\|4813072_4814476_+\|S1-family-peptidase	gnl\|CDD\|365866	pfam00089, Trypsin, Trypsin.	2.25266e-16
NZ_CP048875.1\|WP_164439789.1\|4799546_4801247_+\|PAS-domain-containing-protein	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	1.3454e-121
NZ_CP048875.1\|WP_016472960.1\|4796247_4796898_-\|hypothetical-protein	gnl\|CDD\|224837	COG1926, COG1926, Predicted phosphoribosyltransferases [General function prediction only].	8.23475e-72
NZ_CP048875.1\|WP_164439795.1\|4810531_4811779_-\|ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	2.041e-07
NZ_CP048875.1\|WP_016472944.1\|4815678_4816137_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	3.83441e-22
NZ_CP048875.1\|WP_031175361.1\|4811928_4812906_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.51228e-28
NZ_CP048875.1\|WP_016472964.1\|4792255_4792621_+\|hypothetical-protein	gnl\|CDD\|293679	pfam17074, Darcynin, Darcynin, domain of unknown function. Darcynin is a bacterial protein family. Its function is unknown.	1.76095e-59
NZ_CP048875.1\|WP_016472959.1\|4796949_4797627_-\|alpha/beta-hydrolase	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	7.4261e-06
NZ_CP048875.1\|WP_164439787.1\|4795378_4796071_-\|hypothetical-protein	gnl\|CDD\|370676	pfam09770, PAT1, Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.	2.62745e-11
NZ_CP048875.1\|WP_016472952.1\|4807776_4808163_-\|SseB-family-protein	gnl\|CDD\|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	5.66941e-06

>NZ_CP048875.1|WP_164439791.1|4801983_4802769_-|hypothetical-protein
MAQAPGYVLHSEDLEADLYALPAPEGFFEAEEEYATFRAPGAVRLPGSTPDAGPDGGPGSGPDSGSRSGREHESLQLRVLDADGGPVAAYTIGEARIEEEDRPDGLVDLRVTGWLWDLPRPGTDRIWALWRQAGGTLPPGAWAPLDTEDRRAWLDAARLRAVWRHPLPAPAAPAGGYVLDGSAVTDRPGLYCALGEAMGGPGGYYGASLDALKDCLHGGFGPTAPFTLTWQDPATARTRVPEDLEKVLGALRAAGVTVRPA
>NZ_CP048875.1|WP_164439790.1|4801243_4801954_+|response-regulator
MTAGMEPVEVLVVDDDPAVARINAAYVTKVPGFRVAGTVHSGADALAFLRDHAVDLVLLDHYLPDLPGLALLKRLHTLGVDAEVIMVTAARDTATVRAAQRHGALQYVVKPFTFAHLRSKLDGYAALRRTLAAAPEAGATQETVDRIFGAATAPAAQPESLPKGHSVLTADLVREVVHTARTSLSAQQVAVRTGLSRQTAQRYLKLLEHAGLVRRRLRHGGTGRPVHLYRWNGPDE
>NZ_CP048875.1|WP_164439789.1|4799546_4801247_+|PAS-domain-containing-protein
MRIRSPRHVFSHVLTAQLALVAGVTALVSGLFLAPLGDQLDRQAMRRALAVAQTTAARPGLAADLAAARRAGRVPSPRGPLQAEAERVRHATGASYVVVLDRRGVRWSHPSPAAVGRRVSTDPGRVLAGHDVTAIDNGTLGRSARGKAPLRDSRGRVVGAVSVGIDYDNVREGLVAAVPGLLIYAGGALAAGALAAFLLARRLRRRTHALAFSDISALLAEREAMLHGLAEGVVALDTTGRVRLVNDEAQRLLGLGPEVLGRPVTEVVGPGRTADVLAGAETGRDLVAVSGSRVLVVNRMPTADGGAVATLRDRTELTRLGRELEGTRGLLDALRAQDHEHANRLHTLLGLLELELYEEAARFVTNALGVHRATAEQVTERIHDPLPAALLVGKAAVAAERGVTLSVAPGTHLPDRLADPGGLVTVLGNLVDNALDAAAGSPGATVEVELCAEDRAVLLAVRDSGPGVPPDHRELVFQEGWSTKTAAASDGTSAVPAGAHQGLGLALVKRYAERAGGTVRVAAAAGGGAEFRVVLPEALTDPLTDPVTGPLAEPVTGPLTGPEAVR
>NZ_CP048875.1|WP_164439788.1|4797945_4799457_+|citrate:proton-symporter
MLTILGFVMIATFLVLIMTKKVSPLAALVLIPALFCVLVGQGADLGKYVLDGIGDLAPTAAMLMFAIIYFGVMIDVGLFDPVVRGILRFCKADPMRIVVGTAVLAAVVSLDGDGSTTFMITVSAMLPLYRRLGMSVVVLTGVAATANGVMNTLPWGGPTARAATALKLDAGDIFVPMIPALAVGLLCVLALAYALGLRERRRLGTLAVAGQAAAREERERETVPAGAAGGSGTGRTGRSRDRAVGNGGRGTGPAAGAASGVSSAAAGATRATDTAGGTPAGEDGAAGTAGTDVLDPHRATLRPRLYWFNAALTVVLLALLIAQLMPIPVLFLLGAAVALTVNFRDMADQKARIAAHAENVLNVSGMVFAAAVFTGVLTGTGMVEEMARTVVGAVPDALGPHMALVTGVLSIPFTYLMSNDGFYFGIVPILSEAGAAHGVGPLEIARASLVGQPLHMSSPLVPAVYVLVGMAKVEFGEHTRFTLKWAVLTSVAVLGAGLLFGIL
>NZ_CP048875.1|WP_016472959.1|4796949_4797627_-|alpha/beta-hydrolase
MAAETTQTVRIPVDGPGGTAFLTGDLVTPEGMSATVLFAHGSGSSRFSPRNRAVAAALREEGLATLLLDLLTDDEERVDAATGERRFDIPLLAQRLVAAVDELGRHERTAGAPVGLFGASTGAAAALTAAADRPGTVYAVVSRGGRPDLAGDALAQVVAPVLLVIGSEDREVLRLNEAAAARLRAPHRIHLVRGATHLFEEPGALEEVAREAAGWFALPPTTDGQ
>NZ_CP048875.1|WP_016472960.1|4796247_4796898_-|hypothetical-protein
MRFPDRTQAGRELAGPLEEMRRRQELPDPLVLALPRGGLPVAVEVARALHAPLDVLVARKIGLPGRPEYGVGAIAGEDPPVFDPTALEMLGLTEDRLAPTVAHERTELHRREDLYRGGRPAPRTAGRTVVVVDDGLATGVTARAALRHIRRQEPAQLVLAVPVGAPQAVSALASEADTVVCPHQPAVFEAVGLWYENFPQITDEEVVAALRTTAAG
>NZ_CP048875.1|WP_164439787.1|4795378_4796071_-|hypothetical-protein
MPAENGTASPIYNSLIEEHGDVPADVRQAAQQLQREAEQALDFSPVRNRHPHTGRTPQPESEPPRQQPQQQGQHQESGQYQQHQASRTGQHPLPGQQVPQALQQTGHGQQQPGPSAQQAPQQGRQPGPHGQQHHQAQPGQQGQQGQQGQQPHQAGGQHDQQAPPTGPSQPGQPQHQQHQQRRPLAEPRPQQTEGGGQQQPQQQAGHGQPQHQQAGHGQPQAPQQNGASGQ
>NZ_CP048875.1|WP_164439786.1|4794471_4794921_+|ANTAR-domain-containing-protein
MSAASGSVNTSVAAGRARRRGVPSSAAVPAPRHERADTPGSRLAPENLDTAERQLLEEELEQLRAEVSQLRQALDSRPVIDQARGMVMALGPCDAEVAWQVLVQVSQHSNIKLRHVAAALVAGAEGTPVPKPIRKALASALHRVRTARR
>NZ_CP048875.1|WP_164439785.1|4792782_4794174_+|hypothetical-protein
MRTARCAPRPVPHVRLPRLFVLLGAVAATLLLTAAAGGGPRAVHSIDDAARTLRDGPVYVDPRARDVLPRSSAEALSDKIERAGKPVFVVVLPATGEFDRATVIQDLRAETGITGVYAVALGDRFDARADSRVMSPRSVRNLSGAVGRAHPGDPRAALTDFTDQALDQARGSAPDSWEGASRGTGGGVVAVVTLGALVLLAAASAFLVSRRGRRRREQQERAALERLRPVVDEDITAFGEELSRIGFDPRGPDATEPAREDYTRALDAYEEAKSTMSAARHPGEVRRVSEALERGRFDLATLDARLKGEPLPERRPPCFFDPRHGPSVKDVRWTPPDGGTERSVPVCAADATRLADGEEPLTRQVGTATGPRPYWDAGPVLAPWAAGYFGGGLLPGMLMGTVLGSSLFAPFGYGDPGGDFDGGDFSGGDFSGGDFDSRDFGGGFGDGGGFGGGGGDFGGGGGF
>NZ_CP048875.1|WP_016472964.1|4792255_4792621_+|hypothetical-protein
MSTEETAPPVTAFMLIKTQPEWLAMTPEERVNAFATEVVPAIKARTKGVRSRFYDTEFYSTRVTDVWVWEADDHHAYQLLIDALRETPFWDRYFEVVDLLVGTENGYARTYGMDAVATVAT
>NZ_CP048875.1|WP_016472953.1|4807192_4807780_-|hypothetical-protein
MSEHDKGKPAGGDGPAPGAGYAVEIASVRRVLSPLEESVVAARKIKDDWKTMAEGITNAAAFDVEKPAKDVLSEWGFGMGRVAENTTVIVETLRQVIAAYMLADLLRIKDFAPTEDNMAKLPFGERGLQAWKDGARPDFDPPPGIYQEPWFDDDGDGGGGGTHVTGDLPTNPRYQVAGEGGEGWVVDGGGKAPLA
>NZ_CP048875.1|WP_016472952.1|4807776_4808163_-|SseB-family-protein
MSLRELVRDEEYARLSRPQLLERLRGARLYFQQPEEPGFLVSQTQDGPLVPVFTSWERLALFAGVCAWASTTAEDLVELLPEGVRALVDPLGPRPFLLDATVFEGPDVHAGDGAGGGPGRVAEGVRAR
>NZ_CP048875.1|WP_030409133.1|4808721_4810029_+|MFS-transporter
MAGGKSPKRSRKRSLGRPFALLWAAFAVSAFGTRLAFDAFPLVAILALDAGPAQVSLLAAAGGLVGALLAVPLGPWIEFRRKRPVMVATDLLRCAALLTVPAAYALGLLTFGQLLVVAVVTGAADLAFRAAAGACLKDLVAPEQLLVANGRFEATSWTTTMLGPPLGGALVGMFGPVVTVVADAVSYLLSALGIRAIGTDETPPRRAAKPTGDGSAGRLSARELLAGWQYVLAHPALRVLFVNTALVSGLIMAVSPLLAVLMLGRLGFAPWQYGLAFALPCVGGLIGSRLAGRLVERAGQRRVLLVAGTLRAVWLPGLALVGPGPGGLVLVVAVELALITCMGVFNPVFATYRLEQVPADRTARVLSAWSVTSKITVALLTGLWGLLADLVGTRTAIALAALLALATPALLPWRPRPPRPASPAHPAEDTGSRAL
>NZ_CP048875.1|WP_164439793.1|4810057_4810222_-|hypothetical-protein
MNVRPGEPVVLCTQAANSRAVRLAGKLGFTEVERFAEYGAEQWFGLWSPAAPPA
>NZ_CP048875.1|WP_164439794.1|4810243_4810459_+|hypothetical-protein
MVLGFWGIPFLVFGLLLASDYRGFTESVFRVLSGNLPTSRSARPGNLRVVGAGFVVIGAFFFIGGFSGALK
>NZ_CP048875.1|WP_164439795.1|4810531_4811779_-|ANTAR-domain-containing-protein
MVTTADRPGAARTEVVRLPGGGSLWVVRAEGGVRDAEHPALRAVARSGPEHDAAVLDLALVPLVTAPGVRALVHHAHDLTERGSSLLVATDAPRTRDRLTADTTLTVVPTVAAAAAACGAPDTTPPAPGLDPASDSGNSPSRGRTDGADPELARLRQEVRHLRARARTHPLVSRAQGILEERYRLPDERAAFALLEASSQRFNVRLRTLASAVVTVPRPRSPDHEWFPRRERQAPPALAFQPGLRAATANTSEVLSAVLRRSMEITDASMGNVQLVDPVTGDLRLEKHHGLDDDFVDFFDRVSHEGTACALAAEHLARVTVTDVATDAAFTESARKAILATGSRGCHSTPLLAPRGRVEGMVSTHHERPVHALSAAQARALDEIGDQAGRWLEWYQRTVVLDALEHLHFTGSTWG
>NZ_CP048875.1|WP_031175361.1|4811928_4812906_+|LysR-family-transcriptional-regulator
MDLELRHLKVVSAIAEAGSLTRAATGLGLAQPALSAQLKRMERALGGALFVRGPQGVRPTELGELVLERARVLVPAVAELQQEALRFSRAGGAPRGRPARFRLGGTHGPLLGGLVDRLASAHPEATVTTHTSWSAIELGCLLAEGRIDYVLTGVCGQSPPPAAGTGERLVWREVAVDPVFVMLREGHPLAQLPEVPLGELADARWTNVPGDGCFADCFAAACARAGFTPQAVYETDTASCVHLVQVGRAVGLCRATFPPTPGLVTRPLAGSPLLWRHLLGWHPESPAAGTAADTLAHARAVHESAAGASPSYAAWRRIHHAAGVP
>NZ_CP048875.1|WP_164439796.1|4813072_4814476_+|S1-family-peptidase
MAVPASSGPLPTPPRPASVRRRTVAAAAATVATAGLVLAGLSGSAQAEGETARPSAAAPAPAPGLLKAMSRDLGLTTEQAKTRLANEADAADTVDALRRALGDSYAGAHLSGKTSARLTVATTDERERARITEAGATARVVGRDLGDLDRVLKALDRAAAKSAPEGVRVWYADVERNAVVVETATNAAARKLLGRAGVGGDEVTLRHTDAKPRTFADLRGGDAYYMNGSGRCSIGFSVKRGTQGGFVTAGHCGTVGTSTSGYNQQAQGTFQGSTFPGRDYAWVATNSNWTPRPTVNGYGRGDVTVAGSTQAPVGASVCRSGSTTGWHCGVVEQHNTSVTYPQGTVSGVTRTTVCAEPGDSGGSFISGDQAQGMTSGGSGNCSSGGTTFFYPVNPALQAYGLTLVTNGGGGPTDPPTDPPEQGTWAVGTQYAVGDQVTYNGATYRCVQAHTAQPGWNPEDAPSLWSRV
>NZ_CP048875.1|WP_164439797.1|4814686_4815601_-|sigma-70-family-RNA-polymerase-sigma-factor
MDAPEIPGGRFEEHRTQLRAVAYRMLGSLSEADDAVQECWLRYSRSDTSQVRNLAGWLTTVVGRICLDMLRSRTGRAEVPLEGVHVPDPVVAPLTGEEAAVRTEEVGLALLVVLDTLSPAERVAFVLHDTFAVPFDEIAPLLDRTPAATRQLASRARRRVRDAGHGGERPDARRQREVVAAFLAAARGGDFDALVGLLDPQVTLRADTGGAGSRLVRGAAEVASQATAFRNAAMHAVPVLVGGEPGLAAVVGGRAVSVMSFTLVPDGHGPAGAVRELNILADPRRLARLGVAEVLGAAPAERGH
>NZ_CP048875.1|WP_016472944.1|4815678_4816137_+|carboxymuconolactone-decarboxylase-family-protein
MTARIQNPAALLSEGLQPIQELLKTAHGCGVPKATLELVHLRASQINGCGFCVDYGVRTAREAGETDERLHAVAAWRDTPYFDDAERAALALAEAVTRLADRPDPVPDAVWDEAARHYDEKQLAGLLLMTGITNLFNRFNVPTRQPAGSLPW

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Crispr_ID: NZ_CP048875_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_15

4805212-4805365

Orphan

Consensus_repeat	Method
GTGGTGTTGCCCAGCGCGTCGGTGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP048875_15

>merge|NZ_CP048875|15|4805212-4805365|CRISPRCasFinder
GTCGTGTGCCCCAGCGGGTCCGTCACGGTGAGCGGGCGCAGATTGTCCGCGTCCCATTCGGTGCGCACGGTGTTGCCGAGGGGATCGGTCTCGGCGACGACCTTGCCGGCCTCGTTCAGGACGTATGTGGTGGTGTGCCCCAGGGAGTCGGTGT

>NZ_CP048875|15|14|4805212-4805365|CRISPRCasFinder
GTCGTGTGCCCCAGCGGGTCCGTCA	CGGTGAGCGGGCGCAGATTGTCCGCGTCCCATTCGGTGCGC
ACGGTGTTGCCGAGGGGATCGGTCT	CGGCGACGACCTTGCCGGCCTCGTTCAGGACGTATGTG
GTGGTGTGCCCCAGGGAGTCGGTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_164439791.1\|4801983_4802769_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240166
NZ_CP048875.1\|WP_164439794.1\|4810243_4810459_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_030409133.1\|4808721_4810029_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP048875.1\|WP_164439788.1\|4797945_4799457_+\|citrate:proton-symporter	unknown	unknown	gnl\|CDD\|225407
NZ_CP048875.1\|WP_164439786.1\|4794471_4794921_+\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
NZ_CP048875.1\|WP_164439785.1\|4792782_4794174_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237660
NZ_CP048875.1\|WP_016472953.1\|4807192_4807780_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439797.1\|4814686_4815601_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236600
NZ_CP048875.1\|WP_164439790.1\|4801243_4801954_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP048875.1\|WP_164439796.1\|4813072_4814476_+\|S1-family-peptidase	unknown	unknown	gnl\|CDD\|365866
NZ_CP048875.1\|WP_164439789.1\|4799546_4801247_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225827
NZ_CP048875.1\|WP_016472960.1\|4796247_4796898_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224837
NZ_CP048875.1\|WP_164439795.1\|4810531_4811779_-\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
NZ_CP048875.1\|WP_016472944.1\|4815678_4816137_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP048875.1\|WP_031175361.1\|4811928_4812906_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP048875.1\|WP_016472964.1\|4792255_4792621_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293679
NZ_CP048875.1\|WP_016472959.1\|4796949_4797627_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223489
NZ_CP048875.1\|WP_164439787.1\|4795378_4796071_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370676
NZ_CP048875.1\|WP_164439793.1\|4810057_4810222_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016472952.1\|4807776_4808163_-\|SseB-family-protein	unknown	unknown	gnl\|CDD\|377787

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_164439791.1\|4801983_4802769_-\|hypothetical-protein	gnl\|CDD\|240166	cd05143, Barstar_SaI14_like, Barstar_SaI14_like contains sequences that are similar to SaI14, an RNAase inhibitor, which are members of the Barstar family. Barstar is an intracellular inhibitor of barnase, an extracellular ribonuclease of Bacillus amyloliquefaciens. Barstar binds tightly to the barnase active site and sterically blocks it thus inhibiting its potentially lethal RNase activity inside the cell. The sequences in this subfamily are mostly uncharacterized, but believed to have a similar function and role.	9.63175e-21
NZ_CP048875.1\|WP_164439797.1\|4814686_4815601_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236600	PRK09636, PRK09636, RNA polymerase sigma factor SigJ; Provisional.	1.51913e-71
NZ_CP048875.1\|WP_030409133.1\|4808721_4810029_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.64297e-48
NZ_CP048875.1\|WP_164439788.1\|4797945_4799457_+\|citrate:proton-symporter	gnl\|CDD\|225407	COG2851, CitM, H+/citrate symporter [Energy production and conversion].	4.37495e-86
NZ_CP048875.1\|WP_164439786.1\|4794471_4794921_+\|ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	2.36988e-11
NZ_CP048875.1\|WP_164439785.1\|4792782_4794174_+\|hypothetical-protein	gnl\|CDD\|237660	PRK14289, PRK14289, molecular chaperone DnaJ.	2.87155e-05
NZ_CP048875.1\|WP_164439790.1\|4801243_4801954_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	1.05103e-67
NZ_CP048875.1\|WP_164439796.1\|4813072_4814476_+\|S1-family-peptidase	gnl\|CDD\|365866	pfam00089, Trypsin, Trypsin.	2.25266e-16
NZ_CP048875.1\|WP_164439789.1\|4799546_4801247_+\|PAS-domain-containing-protein	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	1.3454e-121
NZ_CP048875.1\|WP_016472960.1\|4796247_4796898_-\|hypothetical-protein	gnl\|CDD\|224837	COG1926, COG1926, Predicted phosphoribosyltransferases [General function prediction only].	8.23475e-72
NZ_CP048875.1\|WP_164439795.1\|4810531_4811779_-\|ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	2.041e-07
NZ_CP048875.1\|WP_016472944.1\|4815678_4816137_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	3.83441e-22
NZ_CP048875.1\|WP_031175361.1\|4811928_4812906_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.51228e-28
NZ_CP048875.1\|WP_016472964.1\|4792255_4792621_+\|hypothetical-protein	gnl\|CDD\|293679	pfam17074, Darcynin, Darcynin, domain of unknown function. Darcynin is a bacterial protein family. Its function is unknown.	1.76095e-59
NZ_CP048875.1\|WP_016472959.1\|4796949_4797627_-\|alpha/beta-hydrolase	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	7.4261e-06
NZ_CP048875.1\|WP_164439787.1\|4795378_4796071_-\|hypothetical-protein	gnl\|CDD\|370676	pfam09770, PAT1, Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.	2.62745e-11
NZ_CP048875.1\|WP_016472952.1\|4807776_4808163_-\|SseB-family-protein	gnl\|CDD\|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	5.66941e-06

>NZ_CP048875.1|WP_164439791.1|4801983_4802769_-|hypothetical-protein
MAQAPGYVLHSEDLEADLYALPAPEGFFEAEEEYATFRAPGAVRLPGSTPDAGPDGGPGSGPDSGSRSGREHESLQLRVLDADGGPVAAYTIGEARIEEEDRPDGLVDLRVTGWLWDLPRPGTDRIWALWRQAGGTLPPGAWAPLDTEDRRAWLDAARLRAVWRHPLPAPAAPAGGYVLDGSAVTDRPGLYCALGEAMGGPGGYYGASLDALKDCLHGGFGPTAPFTLTWQDPATARTRVPEDLEKVLGALRAAGVTVRPA
>NZ_CP048875.1|WP_164439790.1|4801243_4801954_+|response-regulator
MTAGMEPVEVLVVDDDPAVARINAAYVTKVPGFRVAGTVHSGADALAFLRDHAVDLVLLDHYLPDLPGLALLKRLHTLGVDAEVIMVTAARDTATVRAAQRHGALQYVVKPFTFAHLRSKLDGYAALRRTLAAAPEAGATQETVDRIFGAATAPAAQPESLPKGHSVLTADLVREVVHTARTSLSAQQVAVRTGLSRQTAQRYLKLLEHAGLVRRRLRHGGTGRPVHLYRWNGPDE
>NZ_CP048875.1|WP_164439789.1|4799546_4801247_+|PAS-domain-containing-protein
MRIRSPRHVFSHVLTAQLALVAGVTALVSGLFLAPLGDQLDRQAMRRALAVAQTTAARPGLAADLAAARRAGRVPSPRGPLQAEAERVRHATGASYVVVLDRRGVRWSHPSPAAVGRRVSTDPGRVLAGHDVTAIDNGTLGRSARGKAPLRDSRGRVVGAVSVGIDYDNVREGLVAAVPGLLIYAGGALAAGALAAFLLARRLRRRTHALAFSDISALLAEREAMLHGLAEGVVALDTTGRVRLVNDEAQRLLGLGPEVLGRPVTEVVGPGRTADVLAGAETGRDLVAVSGSRVLVVNRMPTADGGAVATLRDRTELTRLGRELEGTRGLLDALRAQDHEHANRLHTLLGLLELELYEEAARFVTNALGVHRATAEQVTERIHDPLPAALLVGKAAVAAERGVTLSVAPGTHLPDRLADPGGLVTVLGNLVDNALDAAAGSPGATVEVELCAEDRAVLLAVRDSGPGVPPDHRELVFQEGWSTKTAAASDGTSAVPAGAHQGLGLALVKRYAERAGGTVRVAAAAGGGAEFRVVLPEALTDPLTDPVTGPLAEPVTGPLTGPEAVR
>NZ_CP048875.1|WP_164439788.1|4797945_4799457_+|citrate:proton-symporter
MLTILGFVMIATFLVLIMTKKVSPLAALVLIPALFCVLVGQGADLGKYVLDGIGDLAPTAAMLMFAIIYFGVMIDVGLFDPVVRGILRFCKADPMRIVVGTAVLAAVVSLDGDGSTTFMITVSAMLPLYRRLGMSVVVLTGVAATANGVMNTLPWGGPTARAATALKLDAGDIFVPMIPALAVGLLCVLALAYALGLRERRRLGTLAVAGQAAAREERERETVPAGAAGGSGTGRTGRSRDRAVGNGGRGTGPAAGAASGVSSAAAGATRATDTAGGTPAGEDGAAGTAGTDVLDPHRATLRPRLYWFNAALTVVLLALLIAQLMPIPVLFLLGAAVALTVNFRDMADQKARIAAHAENVLNVSGMVFAAAVFTGVLTGTGMVEEMARTVVGAVPDALGPHMALVTGVLSIPFTYLMSNDGFYFGIVPILSEAGAAHGVGPLEIARASLVGQPLHMSSPLVPAVYVLVGMAKVEFGEHTRFTLKWAVLTSVAVLGAGLLFGIL
>NZ_CP048875.1|WP_016472959.1|4796949_4797627_-|alpha/beta-hydrolase
MAAETTQTVRIPVDGPGGTAFLTGDLVTPEGMSATVLFAHGSGSSRFSPRNRAVAAALREEGLATLLLDLLTDDEERVDAATGERRFDIPLLAQRLVAAVDELGRHERTAGAPVGLFGASTGAAAALTAAADRPGTVYAVVSRGGRPDLAGDALAQVVAPVLLVIGSEDREVLRLNEAAAARLRAPHRIHLVRGATHLFEEPGALEEVAREAAGWFALPPTTDGQ
>NZ_CP048875.1|WP_016472960.1|4796247_4796898_-|hypothetical-protein
MRFPDRTQAGRELAGPLEEMRRRQELPDPLVLALPRGGLPVAVEVARALHAPLDVLVARKIGLPGRPEYGVGAIAGEDPPVFDPTALEMLGLTEDRLAPTVAHERTELHRREDLYRGGRPAPRTAGRTVVVVDDGLATGVTARAALRHIRRQEPAQLVLAVPVGAPQAVSALASEADTVVCPHQPAVFEAVGLWYENFPQITDEEVVAALRTTAAG
>NZ_CP048875.1|WP_164439787.1|4795378_4796071_-|hypothetical-protein
MPAENGTASPIYNSLIEEHGDVPADVRQAAQQLQREAEQALDFSPVRNRHPHTGRTPQPESEPPRQQPQQQGQHQESGQYQQHQASRTGQHPLPGQQVPQALQQTGHGQQQPGPSAQQAPQQGRQPGPHGQQHHQAQPGQQGQQGQQGQQPHQAGGQHDQQAPPTGPSQPGQPQHQQHQQRRPLAEPRPQQTEGGGQQQPQQQAGHGQPQHQQAGHGQPQAPQQNGASGQ
>NZ_CP048875.1|WP_164439786.1|4794471_4794921_+|ANTAR-domain-containing-protein
MSAASGSVNTSVAAGRARRRGVPSSAAVPAPRHERADTPGSRLAPENLDTAERQLLEEELEQLRAEVSQLRQALDSRPVIDQARGMVMALGPCDAEVAWQVLVQVSQHSNIKLRHVAAALVAGAEGTPVPKPIRKALASALHRVRTARR
>NZ_CP048875.1|WP_164439785.1|4792782_4794174_+|hypothetical-protein
MRTARCAPRPVPHVRLPRLFVLLGAVAATLLLTAAAGGGPRAVHSIDDAARTLRDGPVYVDPRARDVLPRSSAEALSDKIERAGKPVFVVVLPATGEFDRATVIQDLRAETGITGVYAVALGDRFDARADSRVMSPRSVRNLSGAVGRAHPGDPRAALTDFTDQALDQARGSAPDSWEGASRGTGGGVVAVVTLGALVLLAAASAFLVSRRGRRRREQQERAALERLRPVVDEDITAFGEELSRIGFDPRGPDATEPAREDYTRALDAYEEAKSTMSAARHPGEVRRVSEALERGRFDLATLDARLKGEPLPERRPPCFFDPRHGPSVKDVRWTPPDGGTERSVPVCAADATRLADGEEPLTRQVGTATGPRPYWDAGPVLAPWAAGYFGGGLLPGMLMGTVLGSSLFAPFGYGDPGGDFDGGDFSGGDFSGGDFDSRDFGGGFGDGGGFGGGGGDFGGGGGF
>NZ_CP048875.1|WP_016472964.1|4792255_4792621_+|hypothetical-protein
MSTEETAPPVTAFMLIKTQPEWLAMTPEERVNAFATEVVPAIKARTKGVRSRFYDTEFYSTRVTDVWVWEADDHHAYQLLIDALRETPFWDRYFEVVDLLVGTENGYARTYGMDAVATVAT
>NZ_CP048875.1|WP_016472953.1|4807192_4807780_-|hypothetical-protein
MSEHDKGKPAGGDGPAPGAGYAVEIASVRRVLSPLEESVVAARKIKDDWKTMAEGITNAAAFDVEKPAKDVLSEWGFGMGRVAENTTVIVETLRQVIAAYMLADLLRIKDFAPTEDNMAKLPFGERGLQAWKDGARPDFDPPPGIYQEPWFDDDGDGGGGGTHVTGDLPTNPRYQVAGEGGEGWVVDGGGKAPLA
>NZ_CP048875.1|WP_016472952.1|4807776_4808163_-|SseB-family-protein
MSLRELVRDEEYARLSRPQLLERLRGARLYFQQPEEPGFLVSQTQDGPLVPVFTSWERLALFAGVCAWASTTAEDLVELLPEGVRALVDPLGPRPFLLDATVFEGPDVHAGDGAGGGPGRVAEGVRAR
>NZ_CP048875.1|WP_030409133.1|4808721_4810029_+|MFS-transporter
MAGGKSPKRSRKRSLGRPFALLWAAFAVSAFGTRLAFDAFPLVAILALDAGPAQVSLLAAAGGLVGALLAVPLGPWIEFRRKRPVMVATDLLRCAALLTVPAAYALGLLTFGQLLVVAVVTGAADLAFRAAAGACLKDLVAPEQLLVANGRFEATSWTTTMLGPPLGGALVGMFGPVVTVVADAVSYLLSALGIRAIGTDETPPRRAAKPTGDGSAGRLSARELLAGWQYVLAHPALRVLFVNTALVSGLIMAVSPLLAVLMLGRLGFAPWQYGLAFALPCVGGLIGSRLAGRLVERAGQRRVLLVAGTLRAVWLPGLALVGPGPGGLVLVVAVELALITCMGVFNPVFATYRLEQVPADRTARVLSAWSVTSKITVALLTGLWGLLADLVGTRTAIALAALLALATPALLPWRPRPPRPASPAHPAEDTGSRAL
>NZ_CP048875.1|WP_164439793.1|4810057_4810222_-|hypothetical-protein
MNVRPGEPVVLCTQAANSRAVRLAGKLGFTEVERFAEYGAEQWFGLWSPAAPPA
>NZ_CP048875.1|WP_164439794.1|4810243_4810459_+|hypothetical-protein
MVLGFWGIPFLVFGLLLASDYRGFTESVFRVLSGNLPTSRSARPGNLRVVGAGFVVIGAFFFIGGFSGALK
>NZ_CP048875.1|WP_164439795.1|4810531_4811779_-|ANTAR-domain-containing-protein
MVTTADRPGAARTEVVRLPGGGSLWVVRAEGGVRDAEHPALRAVARSGPEHDAAVLDLALVPLVTAPGVRALVHHAHDLTERGSSLLVATDAPRTRDRLTADTTLTVVPTVAAAAAACGAPDTTPPAPGLDPASDSGNSPSRGRTDGADPELARLRQEVRHLRARARTHPLVSRAQGILEERYRLPDERAAFALLEASSQRFNVRLRTLASAVVTVPRPRSPDHEWFPRRERQAPPALAFQPGLRAATANTSEVLSAVLRRSMEITDASMGNVQLVDPVTGDLRLEKHHGLDDDFVDFFDRVSHEGTACALAAEHLARVTVTDVATDAAFTESARKAILATGSRGCHSTPLLAPRGRVEGMVSTHHERPVHALSAAQARALDEIGDQAGRWLEWYQRTVVLDALEHLHFTGSTWG
>NZ_CP048875.1|WP_031175361.1|4811928_4812906_+|LysR-family-transcriptional-regulator
MDLELRHLKVVSAIAEAGSLTRAATGLGLAQPALSAQLKRMERALGGALFVRGPQGVRPTELGELVLERARVLVPAVAELQQEALRFSRAGGAPRGRPARFRLGGTHGPLLGGLVDRLASAHPEATVTTHTSWSAIELGCLLAEGRIDYVLTGVCGQSPPPAAGTGERLVWREVAVDPVFVMLREGHPLAQLPEVPLGELADARWTNVPGDGCFADCFAAACARAGFTPQAVYETDTASCVHLVQVGRAVGLCRATFPPTPGLVTRPLAGSPLLWRHLLGWHPESPAAGTAADTLAHARAVHESAAGASPSYAAWRRIHHAAGVP
>NZ_CP048875.1|WP_164439796.1|4813072_4814476_+|S1-family-peptidase
MAVPASSGPLPTPPRPASVRRRTVAAAAATVATAGLVLAGLSGSAQAEGETARPSAAAPAPAPGLLKAMSRDLGLTTEQAKTRLANEADAADTVDALRRALGDSYAGAHLSGKTSARLTVATTDERERARITEAGATARVVGRDLGDLDRVLKALDRAAAKSAPEGVRVWYADVERNAVVVETATNAAARKLLGRAGVGGDEVTLRHTDAKPRTFADLRGGDAYYMNGSGRCSIGFSVKRGTQGGFVTAGHCGTVGTSTSGYNQQAQGTFQGSTFPGRDYAWVATNSNWTPRPTVNGYGRGDVTVAGSTQAPVGASVCRSGSTTGWHCGVVEQHNTSVTYPQGTVSGVTRTTVCAEPGDSGGSFISGDQAQGMTSGGSGNCSSGGTTFFYPVNPALQAYGLTLVTNGGGGPTDPPTDPPEQGTWAVGTQYAVGDQVTYNGATYRCVQAHTAQPGWNPEDAPSLWSRV
>NZ_CP048875.1|WP_164439797.1|4814686_4815601_-|sigma-70-family-RNA-polymerase-sigma-factor
MDAPEIPGGRFEEHRTQLRAVAYRMLGSLSEADDAVQECWLRYSRSDTSQVRNLAGWLTTVVGRICLDMLRSRTGRAEVPLEGVHVPDPVVAPLTGEEAAVRTEEVGLALLVVLDTLSPAERVAFVLHDTFAVPFDEIAPLLDRTPAATRQLASRARRRVRDAGHGGERPDARRQREVVAAFLAAARGGDFDALVGLLDPQVTLRADTGGAGSRLVRGAAEVASQATAFRNAAMHAVPVLVGGEPGLAAVVGGRAVSVMSFTLVPDGHGPAGAVRELNILADPRRLARLGVAEVLGAAPAERGH
>NZ_CP048875.1|WP_016472944.1|4815678_4816137_+|carboxymuconolactone-decarboxylase-family-protein
MTARIQNPAALLSEGLQPIQELLKTAHGCGVPKATLELVHLRASQINGCGFCVDYGVRTAREAGETDERLHAVAAWRDTPYFDDAERAALALAEAVTRLADRPDPVPDAVWDEAARHYDEKQLAGLLLMTGITNLFNRFNVPTRQPAGSLPW

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Crispr_ID: NZ_CP048875_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_16

6525562-6526435

Unclear

Consensus_repeat	Method
GTTGCGAACCCACCAGGGTTGATGACGAC	CRISPRCasFinder
GTTGCGAACCCACCAGGGTTGATGACGAC	CRT
GTTGCGAACCCACCAGGGTTGATGACGAC	PILER-CR

13 spacers

cas6,cas7,cas5,cas3,cas4,cas1,cas2

The CRISPR arrays of NZ_CP048875_16

>merge|NZ_CP048875|16|6525562-6526435|CRISPRCasFinder,CRT,PILER-CR
GTTGTGAACCCAGCAGGGGTTATGACGACAACAGCACCGACCCCCCCATGCCCACACCGCACACGTTGCGAACCCACCAGGGTTGATGACGACTCGACGCCTCCGGCAAGGTCCCCTCTACGCAGCTCCCGCGTTGCGAACCCACCAGAGTTGATGACGGCGCTCGCCGCCGCCTTCCGCGTCGAGCCGACATGGATGTTGCGAACCCACCAGGGTTGATGACGGCCCGGGAATCGGCCCGGTACGAGTACGTACGCCTCGAGTTGCGAACCCACCAGGGTTGATGACGGCCCCCGACGGCCCGTTCGGACCCGCGCTGTACGGCAGGTTGCGAACCCACCAGGGTTGATGACGACTGAACTACGCCCACCACTGCGCTCCGGGCGGCCAACGTTGCGAACCCACCAGGGTTGATGACGACCTGGACCCACCCCACCCCCCGAACAGGAGCCGCCGTTGCGAACCCACCAGGGTTGATGACGACCCGCGGAGTGCCGCGGCTCGGGAAGCGGCAGGGCCCGTTGCGAACCCACCAGGGTTGATGACGACATGTACCGGTGACGTAGGCAAGTTCCGTAGGAACGGCGTTGCGAACCCACCAGGGTTGATGACGACCACGTGTCTAGAGCTTGATGTCCGCCAGCTGCTGGGGTTGCGAACCCACCAGGGTTGATGACGACGACATCCCGCTACCGTGAGGCCGCCTCGCCCGAGGTGTTGCGAACCCACCAGGGTTGATGACGACCGGGGCGAGGTCACGATCCGCTCCCCTGCCCGCCCTGGTTGCGAACCCACCAGGGTTGATGACGACACGGCATGGGCTCCGCCCCGGTCAAGGACGACCCGTTGCGAACCCACCAGGGTTGATGACGAC

>NZ_CP048875|16|15|6525562-6526435|CRISPRCasFinder
GTTGTGAACCCAGCAGGGGTTATGACGAC	AACAGCACCGACCCCCCCATGCCCACACCGCACAC
GTTGCGAACCCACCAGGGTTGATGACGAC	TCGACGCCTCCGGCAAGGTCCCCTCTACGCAGCTCCCGC
GTTGCGAACCCACCAGAGTTGATGACGGC	GCTCGCCGCCGCCTTCCGCGTCGAGCCGACATGGAT
GTTGCGAACCCACCAGGGTTGATGACGGC	CCGGGAATCGGCCCGGTACGAGTACGTACGCCTCGA
GTTGCGAACCCACCAGGGTTGATGACGGC	CCCCGACGGCCCGTTCGGACCCGCGCTGTACGGCAG
GTTGCGAACCCACCAGGGTTGATGACGAC	TGAACTACGCCCACCACTGCGCTCCGGGCGGCCAAC
GTTGCGAACCCACCAGGGTTGATGACGAC	CTGGACCCACCCCACCCCCCGAACAGGAGCCGCC
GTTGCGAACCCACCAGGGTTGATGACGAC	CCGCGGAGTGCCGCGGCTCGGGAAGCGGCAGGGCCC
GTTGCGAACCCACCAGGGTTGATGACGAC	ATGTACCGGTGACGTAGGCAAGTTCCGTAGGAACGGC
GTTGCGAACCCACCAGGGTTGATGACGAC	CACGTGTCTAGAGCTTGATGTCCGCCAGCTGCTGGG
GTTGCGAACCCACCAGGGTTGATGACGAC	GACATCCCGCTACCGTGAGGCCGCCTCGCCCGAGGT
GTTGCGAACCCACCAGGGTTGATGACGAC	CGGGGCGAGGTCACGATCCGCTCCCCTGCCCGCCCTG
GTTGCGAACCCACCAGGGTTGATGACGAC	ACGGCATGGGCTCCGCCCCGGTCAAGGACGACCC
GTTGCGAACCCACCAGGGTTGATGACGAC

>NZ_CP048875|16|5|6525562-6526435|CRT
GTTGTGAACCCAGCAGGGGTTATGACGAC	AACAGCACCGACCCCCCCATGCCCACACCGCACAC
GTTGCGAACCCACCAGGGTTGATGACGAC	TCGACGCCTCCGGCAAGGTCCCCTCTACGCAGCTCCCGC
GTTGCGAACCCACCAGAGTTGATGACGGC	GCTCGCCGCCGCCTTCCGCGTCGAGCCGACATGGAT
GTTGCGAACCCACCAGGGTTGATGACGGC	CCGGGAATCGGCCCGGTACGAGTACGTACGCCTCGA
GTTGCGAACCCACCAGGGTTGATGACGGC	CCCCGACGGCCCGTTCGGACCCGCGCTGTACGGCAG
GTTGCGAACCCACCAGGGTTGATGACGAC	TGAACTACGCCCACCACTGCGCTCCGGGCGGCCAAC
GTTGCGAACCCACCAGGGTTGATGACGAC	CTGGACCCACCCCACCCCCCGAACAGGAGCCGCC
GTTGCGAACCCACCAGGGTTGATGACGAC	CCGCGGAGTGCCGCGGCTCGGGAAGCGGCAGGGCCC
GTTGCGAACCCACCAGGGTTGATGACGAC	ATGTACCGGTGACGTAGGCAAGTTCCGTAGGAACGGC
GTTGCGAACCCACCAGGGTTGATGACGAC	CACGTGTCTAGAGCTTGATGTCCGCCAGCTGCTGGG
GTTGCGAACCCACCAGGGTTGATGACGAC	GACATCCCGCTACCGTGAGGCCGCCTCGCCCGAGGT
GTTGCGAACCCACCAGGGTTGATGACGAC	CGGGGCGAGGTCACGATCCGCTCCCCTGCCCGCCCTG
GTTGCGAACCCACCAGGGTTGATGACGAC	ACGGCATGGGCTCCGCCCCGGTCAAGGACGACCC
GTTGCGAACCCACCAGGGTTGATGACGAC

>NZ_CP048875|16|5|6525626-6526435|PILER-CR
GTTGCGAACCCACCAGGGTTGATGACGAC	TCGACGCCTCCGGCAAGGTCCCCTCTACGCAGCTCCCGC
GTTGCGAACCCACCAGAGTTGATGACGGC	GCTCGCCGCCGCCTTCCGCGTCGAGCCGACATGGAT
GTTGCGAACCCACCAGGGTTGATGACGGC	CCGGGAATCGGCCCGGTACGAGTACGTACGCCTCGA
GTTGCGAACCCACCAGGGTTGATGACGGC	CCCCGACGGCCCGTTCGGACCCGCGCTGTACGGCAG
GTTGCGAACCCACCAGGGTTGATGACGAC	TGAACTACGCCCACCACTGCGCTCCGGGCGGCCAAC
GTTGCGAACCCACCAGGGTTGATGACGAC	CTGGACCCACCCCACCCCCCGAACAGGAGCCGCC
GTTGCGAACCCACCAGGGTTGATGACGAC	CCGCGGAGTGCCGCGGCTCGGGAAGCGGCAGGGCCC
GTTGCGAACCCACCAGGGTTGATGACGAC	ATGTACCGGTGACGTAGGCAAGTTCCGTAGGAACGGC
GTTGCGAACCCACCAGGGTTGATGACGAC	CACGTGTCTAGAGCTTGATGTCCGCCAGCTGCTGGG
GTTGCGAACCCACCAGGGTTGATGACGAC	GACATCCCGCTACCGTGAGGCCGCCTCGCCCGAGGT
GTTGCGAACCCACCAGGGTTGATGACGAC	CGGGGCGAGGTCACGATCCGCTCCCCTGCCCGCCCTG
GTTGCGAACCCACCAGGGTTGATGACGAC	ACGGCATGGGCTCCGCCCCGGTCAAGGACGACCC
GTTGCGAACCCACCAGGGTTGATGACGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_037611569.1\|6517395_6518016_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_CP048875.1\|WP_016470448.1\|6516257_6517217_-\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223677
NZ_CP048875.1\|WP_016470455.1\|6523952_6525350_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP048875.1\|WP_051803295.1\|6519320_6520415_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|238426
NZ_CP048875.1\|WP_016470456.1\|6536052_6537582_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|238796
NZ_CP048875.1\|WP_164439990.1\|6529986_6530724_+\|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl\|CDD\|187824
NZ_CP048875.1\|WP_164439988.1\|6522333_6523470_-\|acyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|214838
NZ_CP048875.1\|WP_164439991.1\|6530705_6533150_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP048875.1\|WP_164439992.1\|6533146_6533665_+\|Dna2/Cas4-domain-containing-protein	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP048875.1\|WP_016470447.1\|6515982_6516174_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP048875.1\|WP_164439986.1\|6515771_6515963_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP048875.1\|WP_164439989.1\|6528929_6530003_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP048875.1\|WP_053934347.1\|6534651_6534915_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP048875.1\|WP_053934348.1\|6533664_6534645_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NZ_CP048875.1\|WP_030405728.1\|6518153_6518336_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164440389.1\|6526771_6527479_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP048875.1\|WP_164439993.1\|6537785_6538262_+\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439987.1\|6520411_6522337_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173839
NZ_CP048875.1\|WP_135567322.1\|6518454_6519408_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP048875.1\|WP_055499952.1\|6538594_6541315_+\|aconitate-hydratase-AcnA	unknown	unknown	gnl\|CDD\|236445

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_037611569.1\|6517395_6518016_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	1.04081e-12
NZ_CP048875.1\|WP_016470448.1\|6516257_6517217_-\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|223677	COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only].	5.99085e-32
NZ_CP048875.1\|WP_016470455.1\|6523952_6525350_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.00314723
NZ_CP048875.1\|WP_051803295.1\|6519320_6520415_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|238426	cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.	7.67387e-116
NZ_CP048875.1\|WP_016470456.1\|6536052_6537582_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|238796	cd01555, UdpNAET, UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine = phosphate + UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine. This enzyme is of interest as a potential target for anti-bacterial agents. The only other known enolpyruvyl transferase is the related 5-enolpyruvylshikimate-3-phosphate synthase.	1.66547e-129
NZ_CP048875.1\|WP_164439990.1\|6529986_6530724_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|187824	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.2133e-19
NZ_CP048875.1\|WP_164439988.1\|6522333_6523470_-\|acyltransferase-domain-containing-protein	gnl\|CDD\|214838	smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes.	3.5523e-35
NZ_CP048875.1\|WP_164439991.1\|6530705_6533150_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.51961e-48
NZ_CP048875.1\|WP_164439992.1\|6533146_6533665_+\|Dna2/Cas4-domain-containing-protein	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	2.0831e-55
NZ_CP048875.1\|WP_016470447.1\|6515982_6516174_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	9.7416e-17
NZ_CP048875.1\|WP_164439986.1\|6515771_6515963_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	1.25133e-15
NZ_CP048875.1\|WP_164439989.1\|6528929_6530003_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	2.82252e-78
NZ_CP048875.1\|WP_053934347.1\|6534651_6534915_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.10292e-25
NZ_CP048875.1\|WP_053934348.1\|6533664_6534645_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.85647e-131
NZ_CP048875.1\|WP_164440389.1\|6526771_6527479_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.16952e-20
NZ_CP048875.1\|WP_164439987.1\|6520411_6522337_-\|hypothetical-protein	gnl\|CDD\|173839	cd01150, AXO, Peroxisomal acyl-CoA oxidase. Peroxisomal acyl-CoA oxidases (AXO) catalyze the first set in the peroxisomal fatty acid beta-oxidation, the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. In a second oxidative half-reaction, the reduced FAD is reoxidized by molecular oxygen. AXO is generally a homodimer, but it has been reported to form a different type of oligomer in yeast. There are several subtypes of AXO's, based on substrate specificity. Palmitoyl-CoA oxidase acts on straight-chain fatty acids and prostanoids; whereas, the closely related Trihydroxycoprostanoly-CoA oxidase has the greatest activity for 2-methyl branched side chains of bile precursors. Pristanoyl-CoA oxidase, acts on 2-methyl branched fatty acids. AXO has an additional domain, C-terminal to the region with similarity to acyl-CoA dehydrogenases, which is included in this alignment.	7.26956e-34
NZ_CP048875.1\|WP_135567322.1\|6518454_6519408_-\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	4.79009e-71
NZ_CP048875.1\|WP_055499952.1\|6538594_6541315_+\|aconitate-hydratase-AcnA	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0

>NZ_CP048875.1|WP_016470455.1|6523952_6525350_+|hypothetical-protein
MGRRTPNRQLAALLAESGWNAGELARAVNALGTKYGLRLRYDRTAVAHWLEGSRPRPPVPGLVAQVFGRRLGRVVHVGETGLARTAATGNPAEAVLGNADPVDRMTALCGADADPARRLALNREMFAATGIRLPTWPSTAGPGTVVRPGGTAGPLPPGTDPRLADVVTIFAELAEKYGGAHARSALGAYIADDVVPRLRTSPHTKTRDPEMLTGSACLMHLLGMMLADAGLPNLGYHCYRSALELAHRADNRNLYAITLRTMAVQALRLDDLTHARQWSHSALELAAPTATSPVRCYLLAGRAVVRAADGEREGALADLLAAERCHESEADEGAGPLDLFTRYPPAAFRYQRGEVLLWLGDRTQAAVALQDSLAARPPTHHVSRLLTHAQLARTLLDLGQLDAALDQCRQAAAHYPHTSSRRTTTALTALRRSLAPYRRHPQAREVRDHLTRLTRPAPPDSGGTP
>NZ_CP048875.1|WP_164439988.1|6522333_6523470_-|acyltransferase-domain-containing-protein
MPPPHDRPRASTPWTPWPERSGSPGRAGSPGRAGSSETPGNTVHLFPGQGDFAVSPLVRAARAHPVVRAALADVFSQVDEVSAAYGIPALGPALLGDTPPSGRELAAGPVGTPQVALFGASMAVHQALCAIGAAPRRMVAVSFGEIAALTAAGVFGVPDGTHIACRLSRFLRRCRGGMTVLSAGAGEAERLIDAAAASRVAVACVNDPDETVLSGPVQELGQVEARAADRGTDAVRLRLPFSSHHPSLSAQAEGFAAAIRTLPEQPAHTPVHSAVHGGPYGGDDDVCAGLAACLTRPARLPEVLRGAAVPGPTLVLEAGTGQALTRNARRVLDGQEGPFATHSPLQEPDFPWERPGRLHRIGAPDHGHRAPDREEEIA
>NZ_CP048875.1|WP_164439987.1|6520411_6522337_-|hypothetical-protein
MTPASTGRPTPSAPSAPSAPSATGSPPPADPLRTPQARLLADALGPVRPPAPAEGTSRNHLTHQQLGRLAAVLPPARELLHDGDWLAALSSCAALADPALYMTVVNHHVLCLGSVVASADPRQLRAADLARVVDELERGHRKGVFLVTEIGDANSHLALRTTAEFDPATGEFVLRTPDRGAAKFSSVGVPGRPQSAVVCARLVVDGTCYGVHPFLADLCDERHTAPGVTVSGAFGVETLPLEYALVRFDGARLPYDRWLRGTARIDGEGVFHDPHGDAGRALRRTLDVGRPLWATVPSAAAATARASAVAALRHSQHRRSHGRLAPGAPVLAYSTQQRSVLGASAEAFALSCAAGSALDLWQRSQDAGGETEESAAAETAFSPWAAVDRRLSAFKALAVDGAARVSAECRRRCGVAGHLAVNRVTGYAGFAEAFGAAGGDNRLILLDIGRALAEEDTDEAAHAAAPPPAEGTSAAAGTDDPHWWPRTVGVLERRLTARLRAALDEGRRRGLDGMDLWNPLLERARHLGEVHTLRLAARSVADAVTAAHGHDPVGRALAALYGTTQALRLSGPLQWAGVLSGESAASLESAADRQCAELAPYLDEIAARLAPPEDLAPTPLAAPDYAAALHSALSWPDGGDS
>NZ_CP048875.1|WP_051803295.1|6519320_6520415_-|ketoacyl-ACP-synthase-III
MTATFPDPSPAASHSAERPRIGILGMGTYLPTRQRTNDEVAHAAGVSPRWIAERTGVRKRHTAAPDEAASDMAAAAVRSAVAAAGVDMDRLGLLVLATSTPDELGPATACRVQALTKARNAVALDVSAACSGWLFATRVAHDYLSADAGAGYAAVVGVEAYSKFLDPTDRGTAVLFADGAAASVLGPVPTEEGFTDFRLGSDGSLADHVLIPAGGSRAPASADTLADGGHTIRMDGRAVRDFIVEMFPVVVSDCLTRNRLRMDDIDSFVTHQPNPRMLRSVGTAMGIPPGRLPIVADEVGNIGAASTPYALAAAAVDGPLRRGDRILLATFGAGMTWGSALLTWSGAPAIRTGPTAGSLERSAR
>NZ_CP048875.1|WP_135567322.1|6518454_6519408_-|SDR-family-oxidoreductase
MGQRAAHLERRPRHSHRPHRRIPGKERTVNSTPGTLPATTAEAFRLDGARALVTGASRGIGRAVALAFADAGADLALSARSEEALRDTAAEVTRRGRKAVPVPGDFTKATAAGAVVDEAAAALGGLDVVVHNAGILPSGPDGAPRLAPLQHTRQEDWDSVVTVNLNASAALCRHAHPHLAASPRANVVLMSSVAGAVGTPMMEAYAATKAAQISLARSLAAGWAREGIRVNALCPGWTRTDMTSFASHTAPLSDWLMAHVPLGRWAEPEEAAWAALYLASPAAAFLTGQALLLDGGLSVPDGGLAGIPKPASPFAEV
>NZ_CP048875.1|WP_030405728.1|6518153_6518336_+|hypothetical-protein
MTDPEHYALAMGGGPAPGPAVPQEQPRPRAARTADEPGDDDSIRRVPYEPGPAALTRCGP
>NZ_CP048875.1|WP_037611569.1|6517395_6518016_+|TetR/AcrR-family-transcriptional-regulator
MSEQRAESTPTRRRGAALEKAITDAAWEILVEQGYSGFTFEAVAARAGTSKPVLYRRWPQREDLLLATLTRHWRPLDIPDTGSLRQDALTLLRTINAERDRTVILMRIQLADYFRETGTSFNDLRDRLLPADRTPPFERLVDRAVERGELADTPRSARTVNLPFDLVRHDMLMRMGAVPDETIVEIVDAVWLPLLGLPPHDAQPED
>NZ_CP048875.1|WP_016470448.1|6516257_6517217_-|zinc-binding-alcohol-dehydrogenase-family-protein
MPMINAALVESFDEPPHFRSIPAPEAAPGQEVVDVLAVGVHPATRGIAAGKHYTSPKELPAPAGADAVVRRADGSLAYVMVLGAGSLAERIVIDPATAIPLPDGADPALLAATMNPALSSWCALRTRADFRAGQSVLVHGATGNAGSMAVKVAKHLGAERVIAAGRNRTRLDGLTSEGADDIVQLTPDQDATAAALAGAAAEVDVVLDYVWGPPTELAMRAVLEARTQHTRPLDWVQVGGMGGDSITLSGHALRSNAFRILGSGFGQVDMQVIQRELTELAAAVAAGGMAVRPHPFPLDQVEAAWAHKDAPGERTVILL
>NZ_CP048875.1|WP_016470447.1|6515982_6516174_+|DUF397-domain-containing-protein
MSSGTADLAWFKSSYSGTQGDSCVEVAFAEQGVHVRDSKDVSRPAFAVSREGWGEFVRFASKG
>NZ_CP048875.1|WP_164439986.1|6515771_6515963_+|DUF397-domain-containing-protein
MSSGTTTLAWFKSTYSGTQGDSCVEVAFAEQAVQVRDSKDASRPAFAVGREGWGEFVRFVSER
>NZ_CP048875.1|WP_164440389.1|6526771_6527479_+|CRISPR-associated-endoribonuclease-Cas6
MRIRVDVAADAPQMAWRDVHGAARGVAYEVLGAADAELARALHDEGWRGHRLRPLGVTSPQFRGARRKAGVYTTSRDGSVWFGSPVPEIASALIRGLAGRTGLSWGRTRLRVLGFTLDGPAAATPLASPGGSEVVWETATPVVIKREDRYLLPGDEGFTELLEKNLAHKADVLGLPAPRGVRVLDAGPRRRFEVRGAPRIGAQVRVALAGEPEALDALRSWGLGLDTVQGFGWIR
>NZ_CP048875.1|WP_164439989.1|6528929_6530003_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MYLAGKMVLAVEAGAPNNGRGEETTARVKFARIRGQVYPYISAQAARRWVRDGMVELGSLPSPVTRVGKAQGKAQKANTAADPVRYADDDLFGYMRAGAKKDDAATTLRDSPFMLGTLMSVEPAQPTQDFGVMSRGVEEPVLHGHEFYTADLAAPFLLDLPRIGTFTLPGAVGAGGRPNYLTEEQALQAAEAVAAGAAATQFRDQAAVRLPLEERRRRAALLLEALAQLSGGAKKALHYGDRVPALVMLVPFKGGINPLAHCVDGVEGRGLRVRGEVLRAELDAWAGEWEAPVRVGWRPGFRDDLLEEFRRACASELADGRMVIDHPRTVLRALAAELRDGKLDGWFDDPQRDEPQR
>NZ_CP048875.1|WP_164439990.1|6529986_6530724_+|CRISPR-associated-protein-Cas5
MSRSAEAARPAAADGAPGTSTGGVLRAWRAQFHAPVASFKDPLFPGLTHGLPVPPPSTVRGLLAAASGRVAENSPVGIAAWSEGSGVDAETYHPIGADGTNPAVAGRVRAGKGGMTIRDRPFRADVHLVVWLPAPEGRRLAEALRRPRWPLRLGRSQDLVHPLGVREVTLRPAEHAVVGHALAPSGGHEAPEAMPYRLAASITPDRMTTHLADYLWSETPVGLSRVHGAWSEEDSGKQAVWLLEP
>NZ_CP048875.1|WP_164439991.1|6530705_6533150_+|CRISPR-associated-helicase-Cas3'
MAPRTVTPKAKPPRRLPQVRAKSRPVHDPERLTTHSRAVYEAARQIHQRIASPGLLGEAPRLWEWVYAAALLHDAGKVAEGFQQQLAPGAAAWGQRHEVLSLAYVDLLAPAAGWSTEDRLMIATLVATHHRALFPGGGGKLALSQQYNHATDWAEAFTRRRYLGTEQIQVTGAVHRELIAWLAGALGIDPPAREPGDLTLAERARLTFKELLDLWSGPVEADAGLRSVLAQGALTLADHAGSAHYQLHQHMPLPEDYFARLHEEHTPYPHQQAAAATDGHMILIAPTGSGKTEAGLAWAARQIAGMPGLPRLVWTLPYRASLNAARDRMRETLQPGSEEEQPDIGLLHGSLAHTLLTEALDDECPFGETKKPTAAMARQARARAAAMRLFLQRLRVATPHQLLRGAIAGPSHSSVLLEQANSVFVMDELHAYDPETFGRLCAAMSLWERLGSRFAVLSATLAPCMVELIREHRSHPVTVHHAPPGTSPDRHRLVLDETPLTDPRSIDQLAAWLDEGYSVLAVTNTVTRARHLFAELADTARRACPDDPDAALLLHSRFRNRDRAKIERRLLARHPERTSRNGTERRGGLVVATQTVEVSLQLDFDRGATDAAPIEAVAQRAGRVNRRGLHPEGPVPFHVHHPDSQHPYDKEALAASWHALTSLVLSGIDTLSEQDIDTLLALTYDTPWGAEWSRRARRARDEFTDTFLTFTEPFHDRTEFADRLNKEFDGVEAIWETDLPVFESHLKSKDSDPLLAAGLFIPMPYSTFAAHHKTGNAYFDRRLKVHVVTTDYHPDTGLADPAANNTATPGETIL
>NZ_CP048875.1|WP_164439992.1|6533146_6533665_+|Dna2/Cas4-domain-containing-protein
MNPAPTPADDEKNIGGVHIKYLYHCARQLWLYGKGYRPEHRSDLVSFGEIVDETSFTRRRDIDLGEAKVDWVTTGAVVHETKSSRTPNSDHAAQVRHYCLLLERRGITVQGGTVHYPLIRRTTPVDWNAEARAQAETDEHRARGILTAPHPPPRLPRSQCRGCSYLDYCWGE
>NZ_CP048875.1|WP_053934348.1|6533664_6534645_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MPAAGRTYWLTEPCRIRREDNSVRIERPDGSPVRIPITDIRDLVTFDHIDINTSAMALLSRHGVTVHVLDHYGNHAGHFAPAESMASASAVRRQVELTGEPEQRLAVARSLVSATAHNIRWALETTHLNPALATLEATLPHCTTSDEAMGQEGNFRRTAWATLDTHLPPWLRLNGRTRRPPTNAGNAFISYLNALVYARVLTALRTTPLHPAIGFLHADTDRRRNTLALDLAEPFKPLFAERLLKRAAAQKTLTKNDFETDVASASLSTQGRKKVSALMREELATTIYHRALKRKVTYEELIHLEALKIVRLCLEGTPYKPFRPWW
>NZ_CP048875.1|WP_053934347.1|6534651_6534915_+|CRISPR-associated-endonuclease-Cas2
MFIILVYDTATERNPKVLKTCRKYLHWTQRSVFQGELTKAQYRALMTLLKNTIDPAYDSIVTYTSRSPDLIETATLGTHLGGPGDIL
>NZ_CP048875.1|WP_016470456.1|6536052_6537582_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MTDDYLGRIGQLIRDARQHRGMTQSQLAEALGTSQSAVNRIERGNQNISLEMIARISEALDSEIVSLGYSGPMHLRVVGGRRLSGSIDVKTSKNACVALLCASLLNSGRTVLRRVARIEEVYRILEVLSSIGVRCRWINGGADLEIVPPAELDLDSIDQEAARRTRSIIMFLGPLLHRMDRFRIPYAGGCDLGTRTVEPHMSALRHFGLAVTATEGVYHAEVEAGVAPKRPIVLTERGDTVTENALLAAARHDGVTVIRNASSNYMVQDLCFFLEQLGVQVDGIGSTTLTVHGVPVIDTDVDYSPSEDPVEAMSLVAAAVVTESELTVRRVPAEFMEIELAVLEEMGLDFDRSAEYAADNGRTRLTDLTVRPSKLEAPIDKIHPMPFPGLNIDNVPFFAAIAASAQGKTLIHDWVYDNRAIYLTDLNRLGGRLQLLDPHRVLVEGPTRWRAAEMMCPPALRPAVVVLLAMLAAEGTSVLRNVYVINRGYEDLAERLNEVGAQIETFRDI
>NZ_CP048875.1|WP_164439993.1|6537785_6538262_+|DNA-binding-protein
MATTRAAATGQHSDDPFTPPHPEQARERRAHAALFRIAERHAADEAQRGRQAHPSMPGPHEAVRLVAFLLSGAARLQEGEPEVDEADITAALTLVPRVRGELDELEEGLVRMARGRGMTWPQIAFGLGLGTAQAARQRHERLVERTRAAGADGGADGE
>NZ_CP048875.1|WP_055499952.1|6538594_6541315_+|aconitate-hydratase-AcnA
MSANSFDARSTLQVGDESYEIFKLDKVEGSARLPYSLKVLLENLLRTEDGANITADHIRALGNWDPKAQPSREIQFTPARVIMQDFTGVPCVVDLATMREAVKELGGDPDRINPLAPAELVIDHSVIADTFGTSDAFKKNVELEYGRNRERYQFLRWGQGAFDEFKVVPPGTGIVHQVNIEHLARVVMVRDGKAYPDTLVGTDSHTTMVNGLGVLGWGVGGIEAEAAMLGQPVSMLIPRVVGFKLTGELPTGTTATDLVLTITEMLRKHGVVGKFVEFYGEGVASVPLANRATIGNMSPEFGSTAAIFPIDQDTISYLKLTGRSAEQLALVEAYAKEQGLWHDPSREPEFSEYLELDLSTVVPSIAGPKRPQDRIALSDAAHQFGLDVVNYVSETDTDEAGKESFPASDAPAVSNGVPSKPVQVTGPDGVTYELDHGAVAVAAITSCTNTSNPYVMVGAALLAKKAVEKGLTRKPWVKTTLAPGSQVVMDYYDRAGLTPYLDKLGFNLVGYGCTTCIGNSGPLPEEVSKAVNDNDLAVVSVLSGNRNFEGRINPDVKMNYLASPPLVVAYAIAGSMKVDITRDALGTDQDGNPVHLKDLWPSEQEIEEVVASCIGQEMFTKDYADVFAGDAQWQALPVPTGNTFEWDAESTYVRKPPYFEGMGMEPAPVEDISGARVLAKLGDSVTTDHISPAGAIKADTPAGKYLTEHGVARRDFNSYGSRRGNHEVMIRGTFANIRLRNQIAPGTEGGFTRDFTQEGGPVSYIYDAAQNYQAQGTPLVILAGKEYGSGSSRDWAAKGTALLGVRAVIAESYERIHRSNLIGMGVLPLQFPEGGSALDLGLTGEETFTITGITALNDGEIPATVKVTTDTGVEFDATVRIDTPGEADYYRNGGILQYVLRSLIRD

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Crispr_ID: NZ_CP048875_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_17

6535005-6535886

Unclear

Consensus_repeat	Method
GTTGCGAACCCTCCAGGGCTGATGACGGC	PILER-CR
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CRISPRCasFinder
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CRT

13 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas6

The CRISPR arrays of NZ_CP048875_17

>merge|NZ_CP048875|17|6535005-6535886|PILER-CR,CRISPRCasFinder,CRT
GCCGTCATCAGCCCTGGAGGGTTCGCAACCAGCCCTCACCCGGTACGCCGAGCACCTGCCCGGATACGAGCCGTCATCAGCCCTGGAGGGTTCGCAACCTGTGGTCCGAGCGGCGGGCCCGCCAAGCAGCCCCGGCCGTCATCAGCCCTGGAGGGTTCGCAACGCTGGGCGTGGCGGCGGCCCTACATCGGCTACGTGCGCCGTCATCAGCCCTGGAGGGTTCGCAACGAAGGCCGTGCGGCAGGCCGCGGCAGGCTGGTGGCAGCCGTCATCAGCCCTGGAGGGTTCGCAACTGGTGCAGGAGCGTGGGCTCGGTGTCCACGTCCGTGGTGCCGTCATCAGCCCTGGAGGGTTCGCAACGCGGGTGACGCGCTGGCTGAAGCGGATCGCGCAGGCGCCGTCATCAGCCCTGGAGGGTTCGCAACACCGCAGCGTGGACACCCGCGCCGTGACCGTGCCCGGCCGTCATCAGCCCTGGAGGGTTCGCAACTAAATGCCGTCCTCCGGGGCTCTCAGTCTGGTGACGAGCCGTCATCAGCCCTGGAGGGTTCGCAACCGCCGCGCTCACGGCGGCCGGGGTGTTCGGCGTGCGCCGTCATCAGCCCTGGAGGGTTCGCAACAGCACACGCGCAGCTTCGCGGAGAACTACGCCAACGAGCCGTCATCAGCCCTGGAGGGTTCGCAACGTGGTGATCCGCCACACCAGTACGGGGACGCTGACCTGCCGTCATCAGCCCTGGAGGGTTCGCGACTGGGGCCGGCAGTGGGTAACGCTCTGGACAGAGGCGCTGTCATCAACCCTGGAGGGATCGCAACCGGCCCAGGAGACCCCGGCCAGGCGCAGCAGCAGCGCGCCGTCATCAGCCCTGGAGCGCGCCCAAC

>NZ_CP048875|17|6|6535005-6535690|PILER-CR
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CAGCCCTCACCCGGTACGCCGAGCACCTGCCCGGATACGA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CTGTGGTCCGAGCGGCGGGCCCGCCAAGCAGCCCCG
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GCTGGGCGTGGCGGCGGCCCTACATCGGCTACGTGC
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GAAGGCCGTGCGGCAGGCCGCGGCAGGCTGGTGGCA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	TGGTGCAGGAGCGTGGGCTCGGTGTCCACGTCCGTGGT
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GCGGGTGACGCGCTGGCTGAAGCGGATCGCGCAGGC
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	ACCGCAGCGTGGACACCCGCGCCGTGACCGTGCCCG
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	TAAATGCCGTCCTCCGGGGCTCTCAGTCTGGTGACGA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CGCCGCGCTCACGGCGGCCGGGGTGTTCGGCGTGC
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	AGCACACGCGCAGCTTCGCGGAGAACTACGCCAACGA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC

>NZ_CP048875|17|16|6535005-6535886|CRISPRCasFinder
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CAGCCCTCACCCGGTACGCCGAGCACCTGCCCGGATACGA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CTGTGGTCCGAGCGGCGGGCCCGCCAAGCAGCCCCG
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GCTGGGCGTGGCGGCGGCCCTACATCGGCTACGTGC
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GAAGGCCGTGCGGCAGGCCGCGGCAGGCTGGTGGCA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	TGGTGCAGGAGCGTGGGCTCGGTGTCCACGTCCGTGGT
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GCGGGTGACGCGCTGGCTGAAGCGGATCGCGCAGGC
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	ACCGCAGCGTGGACACCCGCGCCGTGACCGTGCCCG
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	TAAATGCCGTCCTCCGGGGCTCTCAGTCTGGTGACGA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CGCCGCGCTCACGGCGGCCGGGGTGTTCGGCGTGC
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	AGCACACGCGCAGCTTCGCGGAGAACTACGCCAACGA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GTGGTGATCCGCCACACCAGTACGGGGACGCTGACCT
GCCGTCATCAGCCCTGGAGGGTTCGCGAC	TGGGGCCGGCAGTGGGTAACGCTCTGGACAGAGGC
GCTGTCATCAACCCTGGAGGGATCGCAAC	CGGCCCAGGAGACCCCGGCCAGGCGCAGCAGCAGCGC
GCCGTCATCAGCCCTGGAGCGCGCCCAAC

>NZ_CP048875|17|6|6535005-6535886|CRT
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CAGCCCTCACCCGGTACGCCGAGCACCTGCCCGGATACGA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CTGTGGTCCGAGCGGCGGGCCCGCCAAGCAGCCCCG
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GCTGGGCGTGGCGGCGGCCCTACATCGGCTACGTGC
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GAAGGCCGTGCGGCAGGCCGCGGCAGGCTGGTGGCA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	TGGTGCAGGAGCGTGGGCTCGGTGTCCACGTCCGTGGT
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GCGGGTGACGCGCTGGCTGAAGCGGATCGCGCAGGC
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	ACCGCAGCGTGGACACCCGCGCCGTGACCGTGCCCG
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	TAAATGCCGTCCTCCGGGGCTCTCAGTCTGGTGACGA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	CGCCGCGCTCACGGCGGCCGGGGTGTTCGGCGTGC
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	AGCACACGCGCAGCTTCGCGGAGAACTACGCCAACGA
GCCGTCATCAGCCCTGGAGGGTTCGCAAC	GTGGTGATCCGCCACACCAGTACGGGGACGCTGACCT
GCCGTCATCAGCCCTGGAGGGTTCGCGAC	TGGGGCCGGCAGTGGGTAACGCTCTGGACAGAGGC
GCTGTCATCAACCCTGGAGGGATCGCAAC	CGGCCCAGGAGACCCCGGCCAGGCGCAGCAGCAGCGC
GCCGTCATCAGCCCTGGAGCGCGCCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_164439990.1\|6529986_6530724_+\|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl\|CDD\|187824
NZ_CP048875.1\|WP_164439994.1\|6543770_6545924_-\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|131764
NZ_CP048875.1\|WP_016470455.1\|6523952_6525350_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP048875.1\|WP_164439996.1\|6549649_6551896_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_016470456.1\|6536052_6537582_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|238796
NZ_CP048875.1\|WP_055499952.1\|6538594_6541315_+\|aconitate-hydratase-AcnA	unknown	unknown	gnl\|CDD\|236445
NZ_CP048875.1\|WP_164439988.1\|6522333_6523470_-\|acyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|214838
NZ_CP048875.1\|WP_016470459.1\|6541464_6542127_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP048875.1\|WP_016470463.1\|6547213_6548893_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235629
NZ_CP048875.1\|WP_164439992.1\|6533146_6533665_+\|Dna2/Cas4-domain-containing-protein	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP048875.1\|WP_164439991.1\|6530705_6533150_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP048875.1\|WP_016470460.1\|6542289_6543705_-\|OFA-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340911
NZ_CP048875.1\|WP_164439989.1\|6528929_6530003_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP048875.1\|WP_053934347.1\|6534651_6534915_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP048875.1\|WP_164439993.1\|6537785_6538262_+\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164440389.1\|6526771_6527479_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP048875.1\|WP_164439995.1\|6549090_6549624_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_164439987.1\|6520411_6522337_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173839
NZ_CP048875.1\|WP_078565892.1\|6545924_6547157_-\|formyl-CoA-transferase	unknown	unknown	gnl\|CDD\|180055
NZ_CP048875.1\|WP_053934348.1\|6533664_6534645_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_164439990.1\|6529986_6530724_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|187824	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.2133e-19
NZ_CP048875.1\|WP_164439994.1\|6543770_6545924_-\|CoA-binding-protein	gnl\|CDD\|131764	TIGR02717, Uncharacterized_protein_MJ0590, acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.	2.48844e-154
NZ_CP048875.1\|WP_016470455.1\|6523952_6525350_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.00314723
NZ_CP048875.1\|WP_016470456.1\|6536052_6537582_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|238796	cd01555, UdpNAET, UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine = phosphate + UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine. This enzyme is of interest as a potential target for anti-bacterial agents. The only other known enolpyruvyl transferase is the related 5-enolpyruvylshikimate-3-phosphate synthase.	1.66547e-129
NZ_CP048875.1\|WP_055499952.1\|6538594_6541315_+\|aconitate-hydratase-AcnA	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NZ_CP048875.1\|WP_164439988.1\|6522333_6523470_-\|acyltransferase-domain-containing-protein	gnl\|CDD\|214838	smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes.	3.5523e-35
NZ_CP048875.1\|WP_016470459.1\|6541464_6542127_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	2.23446e-48
NZ_CP048875.1\|WP_016470463.1\|6547213_6548893_-\|hypothetical-protein	gnl\|CDD\|235629	PRK05858, PRK05858, acetolactate synthase.	1.38767e-153
NZ_CP048875.1\|WP_164439992.1\|6533146_6533665_+\|Dna2/Cas4-domain-containing-protein	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	2.0831e-55
NZ_CP048875.1\|WP_164439991.1\|6530705_6533150_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.51961e-48
NZ_CP048875.1\|WP_016470460.1\|6542289_6543705_-\|OFA-family-MFS-transporter	gnl\|CDD\|340911	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.1232e-110
NZ_CP048875.1\|WP_164439989.1\|6528929_6530003_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	2.82252e-78
NZ_CP048875.1\|WP_053934347.1\|6534651_6534915_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.10292e-25
NZ_CP048875.1\|WP_164440389.1\|6526771_6527479_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.16952e-20
NZ_CP048875.1\|WP_164439987.1\|6520411_6522337_-\|hypothetical-protein	gnl\|CDD\|173839	cd01150, AXO, Peroxisomal acyl-CoA oxidase. Peroxisomal acyl-CoA oxidases (AXO) catalyze the first set in the peroxisomal fatty acid beta-oxidation, the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. In a second oxidative half-reaction, the reduced FAD is reoxidized by molecular oxygen. AXO is generally a homodimer, but it has been reported to form a different type of oligomer in yeast. There are several subtypes of AXO's, based on substrate specificity. Palmitoyl-CoA oxidase acts on straight-chain fatty acids and prostanoids; whereas, the closely related Trihydroxycoprostanoly-CoA oxidase has the greatest activity for 2-methyl branched side chains of bile precursors. Pristanoyl-CoA oxidase, acts on 2-methyl branched fatty acids. AXO has an additional domain, C-terminal to the region with similarity to acyl-CoA dehydrogenases, which is included in this alignment.	7.26956e-34
NZ_CP048875.1\|WP_078565892.1\|6545924_6547157_-\|formyl-CoA-transferase	gnl\|CDD\|180055	PRK05398, PRK05398, formyl-coenzyme A transferase; Provisional.	0
NZ_CP048875.1\|WP_053934348.1\|6533664_6534645_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.85647e-131

>NZ_CP048875.1|WP_053934347.1|6534651_6534915_+|CRISPR-associated-endonuclease-Cas2
MFIILVYDTATERNPKVLKTCRKYLHWTQRSVFQGELTKAQYRALMTLLKNTIDPAYDSIVTYTSRSPDLIETATLGTHLGGPGDIL
>NZ_CP048875.1|WP_053934348.1|6533664_6534645_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MPAAGRTYWLTEPCRIRREDNSVRIERPDGSPVRIPITDIRDLVTFDHIDINTSAMALLSRHGVTVHVLDHYGNHAGHFAPAESMASASAVRRQVELTGEPEQRLAVARSLVSATAHNIRWALETTHLNPALATLEATLPHCTTSDEAMGQEGNFRRTAWATLDTHLPPWLRLNGRTRRPPTNAGNAFISYLNALVYARVLTALRTTPLHPAIGFLHADTDRRRNTLALDLAEPFKPLFAERLLKRAAAQKTLTKNDFETDVASASLSTQGRKKVSALMREELATTIYHRALKRKVTYEELIHLEALKIVRLCLEGTPYKPFRPWW
>NZ_CP048875.1|WP_164439992.1|6533146_6533665_+|Dna2/Cas4-domain-containing-protein
MNPAPTPADDEKNIGGVHIKYLYHCARQLWLYGKGYRPEHRSDLVSFGEIVDETSFTRRRDIDLGEAKVDWVTTGAVVHETKSSRTPNSDHAAQVRHYCLLLERRGITVQGGTVHYPLIRRTTPVDWNAEARAQAETDEHRARGILTAPHPPPRLPRSQCRGCSYLDYCWGE
>NZ_CP048875.1|WP_164439991.1|6530705_6533150_+|CRISPR-associated-helicase-Cas3'
MAPRTVTPKAKPPRRLPQVRAKSRPVHDPERLTTHSRAVYEAARQIHQRIASPGLLGEAPRLWEWVYAAALLHDAGKVAEGFQQQLAPGAAAWGQRHEVLSLAYVDLLAPAAGWSTEDRLMIATLVATHHRALFPGGGGKLALSQQYNHATDWAEAFTRRRYLGTEQIQVTGAVHRELIAWLAGALGIDPPAREPGDLTLAERARLTFKELLDLWSGPVEADAGLRSVLAQGALTLADHAGSAHYQLHQHMPLPEDYFARLHEEHTPYPHQQAAAATDGHMILIAPTGSGKTEAGLAWAARQIAGMPGLPRLVWTLPYRASLNAARDRMRETLQPGSEEEQPDIGLLHGSLAHTLLTEALDDECPFGETKKPTAAMARQARARAAAMRLFLQRLRVATPHQLLRGAIAGPSHSSVLLEQANSVFVMDELHAYDPETFGRLCAAMSLWERLGSRFAVLSATLAPCMVELIREHRSHPVTVHHAPPGTSPDRHRLVLDETPLTDPRSIDQLAAWLDEGYSVLAVTNTVTRARHLFAELADTARRACPDDPDAALLLHSRFRNRDRAKIERRLLARHPERTSRNGTERRGGLVVATQTVEVSLQLDFDRGATDAAPIEAVAQRAGRVNRRGLHPEGPVPFHVHHPDSQHPYDKEALAASWHALTSLVLSGIDTLSEQDIDTLLALTYDTPWGAEWSRRARRARDEFTDTFLTFTEPFHDRTEFADRLNKEFDGVEAIWETDLPVFESHLKSKDSDPLLAAGLFIPMPYSTFAAHHKTGNAYFDRRLKVHVVTTDYHPDTGLADPAANNTATPGETIL
>NZ_CP048875.1|WP_164439990.1|6529986_6530724_+|CRISPR-associated-protein-Cas5
MSRSAEAARPAAADGAPGTSTGGVLRAWRAQFHAPVASFKDPLFPGLTHGLPVPPPSTVRGLLAAASGRVAENSPVGIAAWSEGSGVDAETYHPIGADGTNPAVAGRVRAGKGGMTIRDRPFRADVHLVVWLPAPEGRRLAEALRRPRWPLRLGRSQDLVHPLGVREVTLRPAEHAVVGHALAPSGGHEAPEAMPYRLAASITPDRMTTHLADYLWSETPVGLSRVHGAWSEEDSGKQAVWLLEP
>NZ_CP048875.1|WP_164439989.1|6528929_6530003_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MYLAGKMVLAVEAGAPNNGRGEETTARVKFARIRGQVYPYISAQAARRWVRDGMVELGSLPSPVTRVGKAQGKAQKANTAADPVRYADDDLFGYMRAGAKKDDAATTLRDSPFMLGTLMSVEPAQPTQDFGVMSRGVEEPVLHGHEFYTADLAAPFLLDLPRIGTFTLPGAVGAGGRPNYLTEEQALQAAEAVAAGAAATQFRDQAAVRLPLEERRRRAALLLEALAQLSGGAKKALHYGDRVPALVMLVPFKGGINPLAHCVDGVEGRGLRVRGEVLRAELDAWAGEWEAPVRVGWRPGFRDDLLEEFRRACASELADGRMVIDHPRTVLRALAAELRDGKLDGWFDDPQRDEPQR
>NZ_CP048875.1|WP_164440389.1|6526771_6527479_+|CRISPR-associated-endoribonuclease-Cas6
MRIRVDVAADAPQMAWRDVHGAARGVAYEVLGAADAELARALHDEGWRGHRLRPLGVTSPQFRGARRKAGVYTTSRDGSVWFGSPVPEIASALIRGLAGRTGLSWGRTRLRVLGFTLDGPAAATPLASPGGSEVVWETATPVVIKREDRYLLPGDEGFTELLEKNLAHKADVLGLPAPRGVRVLDAGPRRRFEVRGAPRIGAQVRVALAGEPEALDALRSWGLGLDTVQGFGWIR
>NZ_CP048875.1|WP_016470455.1|6523952_6525350_+|hypothetical-protein
MGRRTPNRQLAALLAESGWNAGELARAVNALGTKYGLRLRYDRTAVAHWLEGSRPRPPVPGLVAQVFGRRLGRVVHVGETGLARTAATGNPAEAVLGNADPVDRMTALCGADADPARRLALNREMFAATGIRLPTWPSTAGPGTVVRPGGTAGPLPPGTDPRLADVVTIFAELAEKYGGAHARSALGAYIADDVVPRLRTSPHTKTRDPEMLTGSACLMHLLGMMLADAGLPNLGYHCYRSALELAHRADNRNLYAITLRTMAVQALRLDDLTHARQWSHSALELAAPTATSPVRCYLLAGRAVVRAADGEREGALADLLAAERCHESEADEGAGPLDLFTRYPPAAFRYQRGEVLLWLGDRTQAAVALQDSLAARPPTHHVSRLLTHAQLARTLLDLGQLDAALDQCRQAAAHYPHTSSRRTTTALTALRRSLAPYRRHPQAREVRDHLTRLTRPAPPDSGGTP
>NZ_CP048875.1|WP_164439988.1|6522333_6523470_-|acyltransferase-domain-containing-protein
MPPPHDRPRASTPWTPWPERSGSPGRAGSPGRAGSSETPGNTVHLFPGQGDFAVSPLVRAARAHPVVRAALADVFSQVDEVSAAYGIPALGPALLGDTPPSGRELAAGPVGTPQVALFGASMAVHQALCAIGAAPRRMVAVSFGEIAALTAAGVFGVPDGTHIACRLSRFLRRCRGGMTVLSAGAGEAERLIDAAAASRVAVACVNDPDETVLSGPVQELGQVEARAADRGTDAVRLRLPFSSHHPSLSAQAEGFAAAIRTLPEQPAHTPVHSAVHGGPYGGDDDVCAGLAACLTRPARLPEVLRGAAVPGPTLVLEAGTGQALTRNARRVLDGQEGPFATHSPLQEPDFPWERPGRLHRIGAPDHGHRAPDREEEIA
>NZ_CP048875.1|WP_164439987.1|6520411_6522337_-|hypothetical-protein
MTPASTGRPTPSAPSAPSAPSATGSPPPADPLRTPQARLLADALGPVRPPAPAEGTSRNHLTHQQLGRLAAVLPPARELLHDGDWLAALSSCAALADPALYMTVVNHHVLCLGSVVASADPRQLRAADLARVVDELERGHRKGVFLVTEIGDANSHLALRTTAEFDPATGEFVLRTPDRGAAKFSSVGVPGRPQSAVVCARLVVDGTCYGVHPFLADLCDERHTAPGVTVSGAFGVETLPLEYALVRFDGARLPYDRWLRGTARIDGEGVFHDPHGDAGRALRRTLDVGRPLWATVPSAAAATARASAVAALRHSQHRRSHGRLAPGAPVLAYSTQQRSVLGASAEAFALSCAAGSALDLWQRSQDAGGETEESAAAETAFSPWAAVDRRLSAFKALAVDGAARVSAECRRRCGVAGHLAVNRVTGYAGFAEAFGAAGGDNRLILLDIGRALAEEDTDEAAHAAAPPPAEGTSAAAGTDDPHWWPRTVGVLERRLTARLRAALDEGRRRGLDGMDLWNPLLERARHLGEVHTLRLAARSVADAVTAAHGHDPVGRALAALYGTTQALRLSGPLQWAGVLSGESAASLESAADRQCAELAPYLDEIAARLAPPEDLAPTPLAAPDYAAALHSALSWPDGGDS
>NZ_CP048875.1|WP_016470456.1|6536052_6537582_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MTDDYLGRIGQLIRDARQHRGMTQSQLAEALGTSQSAVNRIERGNQNISLEMIARISEALDSEIVSLGYSGPMHLRVVGGRRLSGSIDVKTSKNACVALLCASLLNSGRTVLRRVARIEEVYRILEVLSSIGVRCRWINGGADLEIVPPAELDLDSIDQEAARRTRSIIMFLGPLLHRMDRFRIPYAGGCDLGTRTVEPHMSALRHFGLAVTATEGVYHAEVEAGVAPKRPIVLTERGDTVTENALLAAARHDGVTVIRNASSNYMVQDLCFFLEQLGVQVDGIGSTTLTVHGVPVIDTDVDYSPSEDPVEAMSLVAAAVVTESELTVRRVPAEFMEIELAVLEEMGLDFDRSAEYAADNGRTRLTDLTVRPSKLEAPIDKIHPMPFPGLNIDNVPFFAAIAASAQGKTLIHDWVYDNRAIYLTDLNRLGGRLQLLDPHRVLVEGPTRWRAAEMMCPPALRPAVVVLLAMLAAEGTSVLRNVYVINRGYEDLAERLNEVGAQIETFRDI
>NZ_CP048875.1|WP_164439993.1|6537785_6538262_+|DNA-binding-protein
MATTRAAATGQHSDDPFTPPHPEQARERRAHAALFRIAERHAADEAQRGRQAHPSMPGPHEAVRLVAFLLSGAARLQEGEPEVDEADITAALTLVPRVRGELDELEEGLVRMARGRGMTWPQIAFGLGLGTAQAARQRHERLVERTRAAGADGGADGE
>NZ_CP048875.1|WP_055499952.1|6538594_6541315_+|aconitate-hydratase-AcnA
MSANSFDARSTLQVGDESYEIFKLDKVEGSARLPYSLKVLLENLLRTEDGANITADHIRALGNWDPKAQPSREIQFTPARVIMQDFTGVPCVVDLATMREAVKELGGDPDRINPLAPAELVIDHSVIADTFGTSDAFKKNVELEYGRNRERYQFLRWGQGAFDEFKVVPPGTGIVHQVNIEHLARVVMVRDGKAYPDTLVGTDSHTTMVNGLGVLGWGVGGIEAEAAMLGQPVSMLIPRVVGFKLTGELPTGTTATDLVLTITEMLRKHGVVGKFVEFYGEGVASVPLANRATIGNMSPEFGSTAAIFPIDQDTISYLKLTGRSAEQLALVEAYAKEQGLWHDPSREPEFSEYLELDLSTVVPSIAGPKRPQDRIALSDAAHQFGLDVVNYVSETDTDEAGKESFPASDAPAVSNGVPSKPVQVTGPDGVTYELDHGAVAVAAITSCTNTSNPYVMVGAALLAKKAVEKGLTRKPWVKTTLAPGSQVVMDYYDRAGLTPYLDKLGFNLVGYGCTTCIGNSGPLPEEVSKAVNDNDLAVVSVLSGNRNFEGRINPDVKMNYLASPPLVVAYAIAGSMKVDITRDALGTDQDGNPVHLKDLWPSEQEIEEVVASCIGQEMFTKDYADVFAGDAQWQALPVPTGNTFEWDAESTYVRKPPYFEGMGMEPAPVEDISGARVLAKLGDSVTTDHISPAGAIKADTPAGKYLTEHGVARRDFNSYGSRRGNHEVMIRGTFANIRLRNQIAPGTEGGFTRDFTQEGGPVSYIYDAAQNYQAQGTPLVILAGKEYGSGSSRDWAAKGTALLGVRAVIAESYERIHRSNLIGMGVLPLQFPEGGSALDLGLTGEETFTITGITALNDGEIPATVKVTTDTGVEFDATVRIDTPGEADYYRNGGILQYVLRSLIRD
>NZ_CP048875.1|WP_016470459.1|6541464_6542127_+|GntR-family-transcriptional-regulator
MTLSGVPKLRRPGPLREQVYEALLSLITTRQLRPGQHLVESELADRLGVSRQPVREALQRLATDGWVDLRPAQGAFVHEPSEEEADQLLSVRTLLEAEAARLAAAHAGPEGVAELEELCARGEAALLDDDVDAVVDANAAFHAHVMELAGNTVLAELSRQVDRRVRWYYRPVARQRGARSWEEHRQLIAAVAAGDEDAAMRVMREHTEHTRRSYHERREG
>NZ_CP048875.1|WP_016470460.1|6542289_6543705_-|OFA-family-MFS-transporter
MARPDAPGTPLAGTAAHAVGYREVTDHNGRVYRVGETDREILGHSRKIMVYLPWLAMMAISVSEYAFGSAEDTLSHAHHWSRSDTFWILSVWVFFQAGVAFPAGWLRERGLLTARNAMYIGAGLVLLGFLALSHATDVLWAVAGFGVLGGVGSGLVYATCINSVGKWFPERRGGKTGFVNGGFAYGAVPFIFLFNYSFDTGNYRQVLDAIGVYVLVLVAVCAWFFRDPPKNWWPADHDPLRRTGPAKTVTALDKNPPATKQYTPMEAMRTGMLPLMWVLVVMTAGVSIFGISFQVPFAKEVGFGPLVAASSMGIMSVINGVGRGCIGWLSDRWGRKPTLIFVIVVLGLAQFGVLWAGTIHNQALFLVFAFVSGFGSGAFYPMFAALTPDYFGENHNATNYGIAYSGKLVSGLFGGGLGATAVDAWGYDGAYLLAGGISLLAALMALALHRPGAPRRRKIVPNPHPISREAT
>NZ_CP048875.1|WP_164439994.1|6543770_6545924_-|CoA-binding-protein
MDETTADRPAARERVRKVLAAARAAGRTALDAVEAAEVAAAYGIPVPPQALAHDVDEAIRQAEAIGWPVALKVVSPDVLHKTDAGGVVTGVRGPEELRAAHARLLTAVRAHTPGACIDGVLVQRMVSGGQEVLVGAATDPTFGKVVAFGLGGVLVEALGDLTFRLAPATREEAAGMLDSVRAAQVLRGVRGAPPVDRDALTELLVNVSHLAADFPELLEIDLNPVFAGPQGAVAADVRLLLGEPVAADRPRYRTEEILASMRRLMEPRSVAVIGASNEPGKIGNSVMRNLVDGGFTGGIHPVNPKAGTVLDRKAYASVGEVPGDIDVAVFAIPAPLVPDALAEAGRKGVPNAVLIPSGFAETGEQALQDRVVSVAREYGIRLLGPNIYGYYAPWQNLCATFCTPYDVRGGVALTSQSGGIGMAVLGFARATGTGVSAIVGLGNKSDLDEDDLLTWFAQDPRTECVAMHLEDLKDGRAFVRAARETVRSKPVVVLKAGRTAAGSRAAGSHTGALAGDDAVYDDILRQAGVIRAPGLNEMLEYARALPVLPTPRGENVVVITGAGGSGVLLSDALVDNGLSLMEIPDDLDTAFRSLIPPFGSAGNPVDITGGEPPATYEAAIRLGLNDPRVHALVLGYWHTIVTPPMVFAELTARVVAEAREQGIDKPVVASLAGDTEVEDACSHLFAHGVVAYPYTTEKPVAVLGAKYQWARAAGLLP
>NZ_CP048875.1|WP_078565892.1|6545924_6547157_-|formyl-CoA-transferase
MSGKALDGVRVLDMTHVQSGPSATQLLAWLGADVVKLEAPGGDITRRQLRDLPDVDSLYFTMLNCNKRSITLNTKTERGKELLAELIRRSDVLVENFGPGAIDRMGFTWERIQELNPRLVYASIKGFGDGPYTTYKAYEVIAQAMGGSMATTGEADGPPMATGAQIGDSGSGVHTVAGILAALYQRERTGRGQRVRVAMQHAVLNLCRVKLRDHQRLSHGPLSEYPDAPRGDEVPRSGNASGGGQPGWAVRCAPGGPNDYVYVIVQPASWVPLCSLMGRPELAEAPEWATPEARLPKLDKMFRMIEEWSSRLPKWEVLAALNAHNIPCGPILSTKELIEDASLADDGMIVEVEHPTRGRFTTVGSPLKLSDSPVEITSSPLLGEHNEEVFTGELGLPEGELAALRTEGVI
>NZ_CP048875.1|WP_016470463.1|6547213_6548893_-|hypothetical-protein
MPEDNSALVSGGHLVAKALKAEGVEVVYTLCGGHIIDIYDGCADEGIQLVDVRHEQVAAHAADAYARLTGRPGCAVVTAGPGTTDAVTGVANAFRAESPMLLIGGQGAHTQHKMGSLQDLPHVDMMSPITKFAATVPDTARVADMVSMAFRECWHGAPGPSFLEIPRDVLDAKVPAEQARVPQAGRYRASTRQAGDPDAVQRLADLLVAAERPAVLLGGQVWTTRATGPARDLVRALDVPAYMNGAGRGTLPPGDPHHFQLSRRHAFRRADLIVVVGTPFDFRMGYGKRLSPEATVVQIDLDYRTVGKNRDVDLGIVGSADLVLAAVVQAAGRRPAEPSARKAWLEELRQVEEEALAKRAPLLRSDAVPIHPYRLVHEINEFLTDDSLFIGDGGDIVTFSGQVVQPRRPGHWMDPGPLGTLGVGVPFVLAAKQARPESEVVALFGDGAFSLTGWDFETLVRYDLPFVGIVGNNSSMNQIRYGQRAKYGPERERLGNTLGDVPYDAFARMLGGHGEEVRDPAELRPALERARASGKPSLINVWIDPDAYAPGTMNQTMYK
>NZ_CP048875.1|WP_164439995.1|6549090_6549624_-|hypothetical-protein
MVVALILTLTTACSGTDRNYQIPDDLCGIPVNSERMAPFLPGGENLFQRDWTENASSSGISCTLGVDDEDQLNFTGSWADHRAVDSRVAIDQGTPLLGGEYYTIPKNATAYFPCSNPKVRLGAPRSKDGKPHTVTATFYIVEVESLHHPKDEAESEKAMKRFIVPFAKAVKKKLPCR
>NZ_CP048875.1|WP_164439996.1|6549649_6551896_-|hypothetical-protein
MARLTWRNVYQVDLGPLKSAVAQWDTMAGELKEVAAEARRGMLKKSEKARWAGVNADVTKPFIASVAAEIEDAHTEAKDLHAELSAAYSSFKAVQDELQAKVDGARRKGIEISDGKGAQILCKYPPQPGHQNESLPKDKLKELKALAEDLQDLVARANERDAYTAGILARIHGGDPHNFAKNGPIDKYKAKMALHIARKGTGASNKEIRELAELLKYNKDNPTFSHAFFKGLGGPKETLAYYAKMAIDGTKGSSETRLDAIQDLQRYMGPTLATATDPDHKGHLDWGAEFRRLGTKEIGVDELGFKPKGYQVLGNILRYGDYDKRFLTPIAEHIVQLQHDHPKGLWTRPTGPDTQFGLDPNGKGNVGYDPVTSVLEALGHSPEAAEEFFSKDPKDGSVVGYDENGKVDPGKSVDYRYLEELMRKDYPWNNDGSSPVAGEEVHRGKNALGHALEAATLGRPYDQPPEGGRHPEHTADRAQIVRRITEIVSKDRQTVTGDISDSFGRIAGEYMPEINRALATGDPKGDYHAFKTEHTVGFDRQRTVRFLDTIGRHPEGQAEATFGAQRYQAELMRDVVRHPDRFPGTAPETMRHIAWNGGTLEGILGAARHDAIMVAGQEAETKFNEAVEERGEMAKQVAGLPLGAAAERVPVAGDLATGTVESIIDLVVESHKKDTLEQDAADGAAVSFDTRRAAETWAEHAARNAGYPPRVDHQNFIRSITREAAEGYDHGEQLRENAYDNKMRRISD

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Crispr_ID: NZ_CP048875_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048875_18

7789895-7790010

Orphan

Consensus_repeat	Method
TTCGCGGGAGGTTTCCGCCTTCTCTTCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048875_18

>merge|NZ_CP048875|18|7789895-7790010|CRISPRCasFinder
TTCGCGGGAGGTTTCCGCCTTCTCTTCGGTTGCCGGTTGTTCGTCCGCCGGCTGTTCGTCCGCGGGGGAGGGGCCCTTTTCCGGTTTTTCGCGGGAGGGTTCCGCCTTCTCTTCGG

>NZ_CP048875|18|17|7789895-7790010|CRISPRCasFinder
TTCGCGGGAGGTTTCCGCCTTCTCTTCGG	TTGCCGGTTGTTCGTCCGCCGGCTGTTCGTCCGCGGGGGAGGGGCCCTTTTCCGGTTT
TTCGCGGGAGGGTTCCGCCTTCTCTTCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048875.1\|WP_016471548.1\|7797322_7797688_+\|DUF5133-domain-containing-protein	unknown	unknown	gnl\|CDD\|375043
NZ_CP048875.1\|WP_030408572.1\|7794216_7794477_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_031175011.1\|7795766_7795964_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048875.1\|WP_037612245.1\|7797935_7799198_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP048875.1\|WP_053932995.1\|7796403_7797222_+\|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274373
NZ_CP048875.1\|WP_106963862.1\|7777561_7778326_+\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NZ_CP048875.1\|WP_016471539.1\|7790247_7791294_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176859
NZ_CP048875.1\|WP_164440206.1\|7794508_7795042_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379082
NZ_CP048875.1\|WP_030408565.1\|7784020_7784656_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP048875.1\|WP_037612289.1\|7799194_7800202_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|340411
NZ_CP048875.1\|WP_164440205.1\|7784652_7785873_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP048875.1\|WP_016471540.1\|7791300_7792011_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237171
NZ_CP048875.1\|WP_016471535.1\|7786044_7787136_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NZ_CP048875.1\|WP_033229673.1\|7788098_7789340_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP048875.1\|WP_164440434.1\|7778467_7779388_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP048875.1\|WP_135566799.1\|7783087_7783909_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|252734
NZ_CP048875.1\|WP_078882756.1\|7779628_7781185_+\|UbiD-family-decarboxylase	unknown	unknown	gnl\|CDD\|376697
NZ_CP048875.1\|WP_016471536.1\|7787132_7787822_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP048875.1\|WP_055497748.1\|7795120_7795654_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|334450
NZ_CP048875.1\|WP_016471531.1\|7781439_7783065_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|238625

Protein	Function_ID	Function_description	E-value
NZ_CP048875.1\|WP_016471548.1\|7797322_7797688_+\|DUF5133-domain-containing-protein	gnl\|CDD\|375043	pfam17196, DUF5133, Protein of unknown function (DUF5133). This protein of unknown function is part of the Borrelidin synthesis genomic cluster. Borrelidin is a polyketide antibiotic.	1.93441e-22
NZ_CP048875.1\|WP_164440206.1\|7794508_7795042_-\|AAA-family-ATPase	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	7.63879e-05
NZ_CP048875.1\|WP_037612245.1\|7797935_7799198_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	2.07512e-30
NZ_CP048875.1\|WP_053932995.1\|7796403_7797222_+\|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274373	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily. This group of similar sigma-70 factors includes clades found in Bacilli (including the sporulation factors SigF:TIGR02885 and SigG:TIGR02850 as well as SigB:TIGR02941), and the high GC gram positive bacteria (Actinobacteria) where a variable number of them are found depending on the lineage.	3.15665e-94
NZ_CP048875.1\|WP_106963862.1\|7777561_7778326_+\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	8.03835e-17
NZ_CP048875.1\|WP_016471539.1\|7790247_7791294_-\|SRPBCC-family-protein	gnl\|CDD\|176859	cd07817, SRPBCC_8, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	5.04561e-39
NZ_CP048875.1\|WP_030408565.1\|7784020_7784656_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	9.05208e-71
NZ_CP048875.1\|WP_037612289.1\|7799194_7800202_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	5.06919e-23
NZ_CP048875.1\|WP_164440205.1\|7784652_7785873_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.48813e-57
NZ_CP048875.1\|WP_016471540.1\|7791300_7792011_-\|hypothetical-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	7.34187e-07
NZ_CP048875.1\|WP_016471535.1\|7786044_7787136_+\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	2.3574e-14
NZ_CP048875.1\|WP_033229673.1\|7788098_7789340_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	6.95943e-43
NZ_CP048875.1\|WP_164440434.1\|7778467_7779388_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	6.74736e-21
NZ_CP048875.1\|WP_135566799.1\|7783087_7783909_-\|SAM-dependent-methyltransferase	gnl\|CDD\|252734	pfam04672, Methyltransf_19, S-adenosyl methyltransferase. This family contains a SAM (S-adenosyl methyltransferase) domain, with a central beta sheet with 3 alpha-helices on both sides. Crystal packing analysis of the structure Structure 3giw suggests that a monomer is the solution state oligomeric form. An unidentified ligand (UNL, cyan) was found at the putative active site surrounded by the residues His57, His170, Phe171, Tyr216 and Met22. The UNL is likely to be a phenylalanine or phenylalanine-like molecule. (details derived from TOPSAN).	2.60101e-124
NZ_CP048875.1\|WP_078882756.1\|7779628_7781185_+\|UbiD-family-decarboxylase	gnl\|CDD\|376697	pfam01977, UbiD, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. This family has been characterized as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes. This enzyme catalyzes the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+.	4.31029e-131
NZ_CP048875.1\|WP_016471536.1\|7787132_7787822_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.63127e-91
NZ_CP048875.1\|WP_055497748.1\|7795120_7795654_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|334450	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase. Family of domains with putative PNPOx function. Family members were predicted to encode pyridoxamine 5'-phosphate oxidase, based on sequence similarity. However, there is no experimental data to validate the predicted activity and purified proteins, such as yeast YLR456W and its paralogs, do not possess this activity, nor do they bind to flavin mononucleotide (FMN). To date, the only time functional oxidase activity has been experimentally demonstrated is when the sequences contain both pfam01243 and pfam10590. Moreover, some of the family members that contain both domains have been shown to be involved in phenazine biosynthesis. While some molecular function has been experimentally validated for the proteins containing both domains, the role performed by each domain on its own is unknown.	1.02953e-11
NZ_CP048875.1\|WP_016471531.1\|7781439_7783065_+\|amidohydrolase	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	8.70887e-116

>NZ_CP048875.1|WP_033229673.1|7788098_7789340_+|serine/threonine-protein-phosphatase
MLGALISASHFSTLEQLPERLNEEAARVGLTDITVYLVDLQQDLFTPLVPHPPPAGGTGLRHGEFRVEGTVAGRAFQHGEVLPAGPGDHDHWWVPLVDGTDRLGVMRITAPDADEAAQLDMRRLAALVALMIVSKRGLSDSYSRLVRRRRMDVATEMEWRLMPSRTFATDSLMISALMEPAYQVSGDVYDYAFDGRIAQLSLFDAMGHDTAAGVTANLALSTARNARREGSDLASTAAAVEEVLVEQFSGDRFVTGILAELDVTTGELDWLNCGHPHLVVVRGRSPVHLDGPTAPPIGAGLGHPDTLCHKQLEPGDRLLLYTDGVTEARNPEGEEFGLQRFIDFLLRHQADELPVPETLRRLIRHHLAYHKGQLRDDATVVLAEWHGAAGLPEEETKDKVGIPDMPETQPAEE
>NZ_CP048875.1|WP_016471536.1|7787132_7787822_+|ABC-transporter-ATP-binding-protein
MSLDLSDVTLTYPDGDTRLKALDRVSLTVPDGSVTAVVGPSGSGKSSLLAVAATLITPDSGTVTVDGTRTTGMSRRETAALRRQRIGIVFQQPSLLPSLTAAEQLQVMAGIDGRSPARARSRALTLLDAVGLAGQAHRRPHQLSGGQRQRVNIARALMNEPTVLLVDEPTSALDHTRGAAVLDLLTRLTHQQGTATLLVTHDRAYLTAVDRVVEVHDGRLGAPAADTAR
>NZ_CP048875.1|WP_016471535.1|7786044_7787136_+|ABC-transporter-permease
MFVAWRDLRFAKGRFALMGTVIVLITLLVGLLSGLTAGLGQQNISAITGLPADRIAFNAPGDGRAPSYSDSTVTRDQWRRWARTPGVERAEPLGITTTKATAGGTSAGVSVFGVRPGSGPAPDSGRITDGTAVLSRPAADELGVRRGDTVSLAGHEVTVAAVGGEAFFSHTPVVYTSLATWQRTAPPAPGRADGPTATVIALRTAPGVDIRAADRAAGTTTVGKQDSLSAIGSYTSENGSLQLMRGFLFVISALVIGAFFTVWTIQRSADIAVLKALGASTAHLLRDALGQAVVLLAGGTLLGTAAAAGLGAALSGSAVPFLLTPATVLVPAAVMVLLGALGAALSVRRITSVDPLTALGSAR
>NZ_CP048875.1|WP_164440205.1|7784652_7785873_-|sensor-histidine-kinase
MNELTPTTRALAWCLHLLVVGLAGLAAVRSVTDHAPDAPAVVAVAAGLVVVYAVGPVLPVIRRSRRAAACWLAGVGAVWLGLLALTADGVWVAFPLYFLLLHLLPRRSGLFAVAATALAAITAFAAHQEILTVAVVVGPALGAAVAVAVVRGYQALYRESERRRRLIEELTATRADLAAAQHAAGVLEERERLAREIHDTLAQGLSSIQLLLRAAERALPGRPEAAAGHVGRARQAAVDNLAEARRFVAALAPPALEGTSLAGALERLCASTSAQHPLAVRFHVTGQPVPLPAPHRTALLRIAQSALSNTVRHAAARHAEVTLSYLGDRVAVDVVDDGAGFDPERTGAPDPGTSGFGLPAMRARVRALGGTLIVESAPGRGTALAAQLPVSGVPSVPSPSDDEERP
>NZ_CP048875.1|WP_030408565.1|7784020_7784656_-|response-regulator-transcription-factor
MTGSPIRLLIADDHPVVRAGLRAVLETEEDIAVVAEAATAEEAVARAGQGGVDVVLMDLQFGAGMTGAQATAAITAHPGAPRVLVVTTYGTDADTLPAIEAGATGYLLKDAPPEELAAAVRTAAAGRTTLAPAVADRLMQRLRSPHSSLTQRETEVLSLVAEGLSNQGIGRRLHLTEGTVKSHLARIFAKLGVESRTAAVATATDLGLIRR
>NZ_CP048875.1|WP_135566799.1|7783087_7783909_-|SAM-dependent-methyltransferase
MVTAETTRHSTDQPHSARMYDYFLGGKTNYEVDRKAAAVALGALPNIMVAARQNREFMHRAVRLLAREHGLTQFLDIGTGIPTSPNLHQVAQRERPEARVVYSDNDPIVLTYARALMSSTPEGATDYIEADVRQPHVILEHARRRLDFTRPVALSLVALLHFVPDEDGPHALVRELLAPLPPGSALVLSHGTADLEPDAEEVARIYRERGITLHVRTRTAVERFFDGLRLVEPGIVASCDWRPEYIGEDDLPALPGSVTPEQSCVWAGVALKP
>NZ_CP048875.1|WP_016471531.1|7781439_7783065_+|amidohydrolase
MPVDLVLLSARLLDPATGAFLPECALAAADGRIHALGDDAGIRALAGAGTTVVDLKGAVVTPGLVDGHLHPVHGAELARGLDLSGCTDLGTLRETLSREVRRLAPGEWLHGWGLDPNVFGDGPVEAAPLAPVLDGVPALLQMFDAHSMLASPRALELAGVDGPRTFDQAAEVVCDTEGRPTGLLLESAACHLVERAAPQPTRAGRRDRLATALRGMAASGLTGGHVMDGEGLDLLAELDAAGELPLRLRVAPWCQPGTDADALHELIRQQHTGGRLWQVAGVKLFMDGTVDNGTAWLERPDCHGGSTHAFWPDPADYSRIIAELHRAGVPTATHAIGDAAVRHVLDSVEKALAARPGAAAAPRHRVEHIETVPDDTLGRFAWLGVVASMQPTHCCDFTRADHTDNWSRRLGEERAARAWRCRDLWDSGALVVLGSDWPVADHRPLTVMAGARHRRPTRDLSRPPHGPDQALTALEALQGMTVNPALATGDGHHAGRLAVGHRADLTVLADNPLTTPATELAELPVLLTVLDGRPTHRDPAL
>NZ_CP048875.1|WP_078882756.1|7779628_7781185_+|UbiD-family-decarboxylase
MPHPEHPGQSTSPRQPDEAGPALDFRAFVEQLLDEGDAVAVEQTVDPHLEVGAVTRRAYELAAPAPLFTSLTGAEPGFRILGAPAGMSSGRLGEYGRIARHLGLPRTAGPRDILERLVAAMHANPVEPVVVPTGPCRQNVRTGDEVDLEKFPVPLLHQEDGGRYFGTYGFHIVRSPDGEWTSWSVARTMLRDRTTLVGPAMPQQHIGMIHEMWRQRGEHTPWAMVLGAPPAALAAAGMPLPERVSEDGYVGALAGGPVEVVRAQTNDLYVPARAEIVLEGYLSKDETAPEGPMGEYHGYAFPEGKRQPVFHVEAVTWRDDPILPVCAAGLPPEENHTIWGTMISASALDVLRSAELPVEMAWCSYEAATCWIVVSVNRARRAALGMTEKRLVDAVAETLFSSHAGWLVPKVILVDDDIDVTDIRQVVWALATRSHPGTGHHHYPQAPGIPMVPYLTPEEAGSARGGKSVTSCLLPDGFRGTTASFEGSFPRALREHVVGNWARYGYRPEDGAAATAGA
>NZ_CP048875.1|WP_164440434.1|7778467_7779388_-|helix-turn-helix-transcriptional-regulator
MSQNGQPDVADLPFPGTPGGPPGIEVTDLPGLGERIRRLGVAAGAPVRPGFHLVFTVHEGNLPCAVDLTTCTVEPGHWLWVRPGQVFRLHAEGAPADGHDGSRPATGTVVLFEASVLDPGTVTEARLDRRAWRLPLEPAPQVRAPVEQTLNLLESEYHRLRDLPLEAHVEVVRHLLAVLVLRLSHLPGGQRRSTAGDETFRCFRAAVERDYARAHQVEDYAARLGYSVRSLTRASNAAVGRGAKAVIDDRLVLEAERLLLHTDLTVGAVAERLGFTSTTVFTRFFRHRAGETPTGFRNRAQARAPE
>NZ_CP048875.1|WP_106963862.1|7777561_7778326_+|ankyrin-repeat-domain-containing-protein
MVVLTVLAACTVQDGRGSPGGEHGTKAGAPASSSPGKSAAPSASSSAPPTSSSPSPGADRRLLEAAREGDEAAVRAALRAGARTEARDAKRRTPLLLAALGDHVAAARVLVEAGADPDAQDERSDSPWLVTGVTGSVRMARVLLEAGPDLGLTNRFGGTSLIPASERGHVAYVREVLERTSIEVDHVNRLGWTALLEAVILGDGGPDHRKVVALLLDHGADPELADKDGVTPLEHARRRGFDEIARLLRDAGAR
>NZ_CP048875.1|WP_016471539.1|7790247_7791294_-|SRPBCC-family-protein
MPQQHTNDGGSPLDQLRDDLLEYLTAAGKHLVGKATDRLTQIAGQDGPGESNGGGALAKTAARTVKGDNPAKALVAEKAKSAKDKVTEKAKGAVGMGDGGGSKPGDLKAINIIEHVDIGRPLRVVYNHFTQFEDFGGFMNGVSSVSRDEEDETKTTWKVRVWPSTRSYEATVSEQIPDQRIVWSSEGSKGTTSGAVSFHRLDENLTRVAVVVEYYPSGFFEKTGNIWRAQGRRLRLDLKHFQRYVTLQSEEVDGWRGEIRDGEVVRSHDEVVEEEKRDEEESRKDEGRDGAEENGDGGDGGEQEPEENEGDDEGGEGEGAQGDEEGDDGEGGGRGDERGSRRRGRGER
>NZ_CP048875.1|WP_016471540.1|7791300_7792011_-|hypothetical-protein
MNDSQKTTVLAAVVGGYLLGRTKKAKFALTVGSLVAGRRLGVAPQELLGSGLKKLTETPQFEELSSQVKEQLMSAARTAAVSLANRRISSLSSTLRDRTDRLGELAKPGGEQNGGGGGDGDEEGGSREQEEGAQEGRDEADQDRGDGEGGEDGGDGRDGGDDGQAAGDAGGERSQEPEERREPRHRQQSRESSARKRGVAREAAARSASPSAGRPHRKPVSGSAAKRSADRSARRR
>NZ_CP048875.1|WP_030408572.1|7794216_7794477_-|hypothetical-protein
MRNGPRSQAERDALTVEIGYALLSAGLLAALVFAAIASPAVVWELPSRAVHALLLAGAVTAGLLAVVRIVRVLRRYARREGRAREA
>NZ_CP048875.1|WP_164440206.1|7794508_7795042_-|AAA-family-ATPase
MEHAEALLIGGRAGVGKTTVAWEVSALLRAAAVAHVVLEGDYLGQAHPAPDGDPDRARLTEDNLTALWANFARRGHRRLVYTNTVSVLPETAGMFERAMGADVRLIRVLLTASDSTARDRLTGRELGSELEQEIAGSVRKARLLDARAPADTVRVPTDGRSVAAIARETVAVTGWRG
>NZ_CP048875.1|WP_055497748.1|7795120_7795654_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MTAHTPPLEPHTELDARYSSPDATATPWTEAVSCLERAEIFWLSTVRQDGRPHVTPVMTVWTDGALHFTTGERERKVLNITGNPQVALTTGTNTYGEGCDLVVEGEAVRVTDEGRLAALATLWEAKYGSEWHFDVHEEAFRSPAHDVRSLVFRVVPRTAFGFGRGARFSQTRWHFTR
>NZ_CP048875.1|WP_031175011.1|7795766_7795964_-|hypothetical-protein
MRRASKNLIEGSVTFLVGLALKLFAGDVETPVVTLTKAGVVLMCIGGIQVASGLLRAKREPTART
>NZ_CP048875.1|WP_053932995.1|7796403_7797222_+|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor
MCAVRYRPQRNRHSHHDAPDTAADFERLAALPQGPEREELRGRLVAAWLPMAHRLAAKYRNRGEALEDLEQVAALGLVKAVNRFDPAQGTAFEPFAVPTITGEIRRHFRDRAWEVHVPRRVQELRNKVRSAVRALEDTGSGQSVTPERIAELTGLSREDVKAGLEAMESFRALSLDASLTAPDEAFSLADTLGETDAGFDAVVAREAVKPCLRELPERQRKVLYLRFFRGMTQSRIGEELGISQMHVSRLLSRTCERVRRQVEREPAHAGTA
>NZ_CP048875.1|WP_016471548.1|7797322_7797688_+|DUF5133-domain-containing-protein
MLMAHPAVLRDLVEQYETLRVLHAQDGSPEVRQRMNDVAYTLCVSTGTRDVDAALVAARHRLPGARPEDDSLLTARNAPGQAPTEANAAPAAPAADHVRQAADAGTGTAGTDPAAPSASVA
>NZ_CP048875.1|WP_037612245.1|7797935_7799198_-|SpoIIE-family-protein-phosphatase
MNVHESGLATLAHVRQAVRRLADSHGLPTPVRGRLVLSVSQVARPLLARGTGLGLRATRVPATGADEDGTGELVVTLTTDAPAPGTPTDRGALPLPAQRGGDGETVWRLPLPGPAAPPTAGGGEDDGDEAATEAEMRALLAEIDDLTASHQRLTDELAETNSGVLALYVQLEERDEQLRRAHGQTLRELEDALRPAPPHVPGVELAVHYAPADTDAPTGGDLYDWFTLPDGTVHITVVDALGHGVRSTRSALNVTHAVRTLALEGHHPKNIVERVSEILRGIDPQLMATLLLARLNPATGELLLANGSHPPALLVRADGRSEYLEVPGRGIGFPMPGSEEVLPARLGPGDLLVLYTDGLTESRRDPLEGERRLAASARRHATAAITDIPEAIAGDMHTRILHRDDTLALAVRLTREEKQQ
>NZ_CP048875.1|WP_037612289.1|7799194_7800202_-|SpoIIE-family-protein-phosphatase
MTSEAWDRPVTVETRIDHYSAVHLAATRARSLGTRCGLGGSLPDQAAAVASELASNLDKYAREGSVYLQALPLGEGLEIVAVDRGPGMADPRRCLTDGYTTAGSLGTGLGAVQRIATDFRINSTVPDGTVAAARITGGQHRPLPSGAGMVCLPAAGEDVCGDSAAIHENGHIRTTLVIDGLGHGEAAAHAAGRGLRVFHDHCDDPLEQIMQRMHHALRHTRGAAVGLVRIAPGTADFCAVGNIRLCVLSPQRPHRQLDGRPGIVGWNLPTVQTRTATVAADETTVLYSDGIEARWARQPSAYFLGLPAEVLPVALGHRHRRLRDDATAVSLAGVA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP048875_17	17.9\|6535561\|35\|NZ_CP048875\|PILER-CR,CRISPRCasFinder,CRT	6535561-6535595	35	NZ_CP048875.1	6522999-6523033	0	1.0

1. spacer 17.9|6535561|35|NZ_CP048875|PILER-CR,CRISPRCasFinder,CRT matches to position: 6522999-6523033, mismatch: 0, identity: 1.0

cgccgcgctcacggcggccggggtgttcggcgtgc	CRISPR spacer
cgccgcgctcacggcggccggggtgttcggcgtgc	Protospacer
***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048875_4	4.9\|1282875\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282875-1282906	32	CP054922	Streptomyces sp. NA03103 plasmid unnamed2, complete sequence	92991-93022	2	0.938
NZ_CP048875_8	8.1\|2831775\|31\|NZ_CP048875\|CRISPRCasFinder	2831775-2831805	31	NZ_CP015446	Streptomyces sp. S8 plasmid unnamed, complete sequence	18045-18075	2	0.935
NZ_CP048875_10	10.1\|3073657\|26\|NZ_CP048875\|PILER-CR	3073657-3073682	26	NZ_CP047145	Streptomyces sp. HF10 plasmid plas1, complete sequence	82655-82680	2	0.923
NZ_CP048875_10	10.1\|3073657\|26\|NZ_CP048875\|PILER-CR	3073657-3073682	26	NC_007927	Streptomyces sp. 44414 plasmid pRL2, complete sequence	18476-18501	2	0.923
NZ_CP048875_8	8.4\|2831774\|32\|NZ_CP048875\|CRT	2831774-2831805	32	NZ_CP015446	Streptomyces sp. S8 plasmid unnamed, complete sequence	18044-18075	3	0.906
NZ_CP048875_12	12.2\|4312939\|24\|NZ_CP048875\|CRISPRCasFinder	4312939-4312962	24	NZ_CP016313	Thermus brockianus strain GE-1 plasmid pTB1, complete sequence	186306-186329	3	0.875
NZ_CP048875_12	12.2\|4312939\|24\|NZ_CP048875\|CRISPRCasFinder	4312939-4312962	24	NZ_LT559121	Nonomuraea gerenzanensis isolate nono1 plasmid II, complete sequence	44358-44381	3	0.875
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	KY365739	Streptomyces phage BabyGotBac, complete genome	5842-5873	4	0.875
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	MH178382	Streptomyces phage Salete, complete genome	5842-5873	4	0.875
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	KU189325	Streptomyces phage Maih, complete genome	5841-5872	4	0.875
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	MH178381	Streptomyces phage BayC, complete genome	5842-5873	4	0.875
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	KP876466	Streptomyces phage TP1604, complete genome	5842-5873	4	0.875
NZ_CP048875_10	10.2\|3073718\|26\|NZ_CP048875\|PILER-CR	3073718-3073743	26	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	855947-855972	4	0.846
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	147031-147062	5	0.844
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	327269-327300	5	0.844
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	147031-147062	5	0.844
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	327269-327300	5	0.844
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	248899-248929	5	0.839
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	MH590599	Streptomyces phage Karimac, complete genome	57687-57718	5	0.844
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	MN428060	Streptomyces phage IchabodCrane, complete genome	57282-57313	5	0.844
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	MH576968	Streptomyces phage Wofford, complete genome	58625-58656	5	0.844
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	248899-248929	5	0.839
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	MH590599	Streptomyces phage Karimac, complete genome	57687-57718	5	0.844
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	MN428060	Streptomyces phage IchabodCrane, complete genome	57282-57313	5	0.844
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	MH576968	Streptomyces phage Wofford, complete genome	58625-58656	5	0.844
NZ_CP048875_10	10.1\|3073657\|26\|NZ_CP048875\|PILER-CR	3073657-3073682	26	MK977705	Gordonia Phage Mollymur, complete genome	83897-83922	5	0.808
NZ_CP048875_10	10.2\|3073718\|26\|NZ_CP048875\|PILER-CR	3073718-3073743	26	NZ_CP022192	Yangia pacifica strain YSBP01 plasmid unnamed2, complete sequence	58854-58879	5	0.808
NZ_CP048875_10	10.2\|3073718\|26\|NZ_CP048875\|PILER-CR	3073718-3073743	26	AY320035	Bacteriophage VWB, complete genome	6400-6425	5	0.808
NZ_CP048875_10	10.2\|3073718\|26\|NZ_CP048875\|PILER-CR	3073718-3073743	26	NC_005345	Streptomyces phage VWB, complete genome	6400-6425	5	0.808
NZ_CP048875_4	4.6\|1282691\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282691-1282722	32	NZ_CP011666	Streptomyces sp. Mg1 plasmid pSMg1-2, complete sequence	74315-74346	6	0.812
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	CP053333	Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence	58114-58145	6	0.812
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	CP053333	Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence	58114-58145	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_CP050835	Klebsiella pneumoniae strain Bckp021 plasmid pBckp021-1, complete sequence	218028-218059	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	LR134252	Klebsiella aerogenes strain NCTC9997 genome assembly, plasmid: 2	39532-39563	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_CP040862	Klebsiella pneumoniae strain Xen39 plasmid unnamed3, complete sequence	259905-259936	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_CP007734	Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-262, complete sequence	189330-189361	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_CP026186	Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-3967, complete sequence	106918-106949	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_CP031614	Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C1, complete sequence	107136-107167	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_CP018361	Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence	89044-89075	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_AP014952	Klebsiella oxytoca strain JKo3 plasmid pKO_JKo3_1, complete sequence	102029-102060	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_CP014763	Klebsiella pneumoniae strain KPNIH39 plasmid pKPN-332, complete sequence	233846-233877	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	209230-209261	6	0.812
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	MN661402	Klebsiella quasipneumoniae strain KP18-31 plasmid pKP18-31-IMP,KPC, complete sequence	127801-127832	6	0.812
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	477443-477473	6	0.806
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	657775-657805	6	0.806
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	257127-257157	6	0.806
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	477443-477473	6	0.806
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	657775-657805	6	0.806
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	257127-257157	6	0.806
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	376932-376962	6	0.806
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP012653	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK07, complete sequence	9816-9848	7	0.788
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	223112-223143	7	0.781
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_017806	Deinococcus gobiensis I-0 plasmid P5, complete sequence	8527-8558	7	0.781
NZ_CP048875_4	4.9\|1282875\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282875-1282906	32	NC_023606	Mycobacterium phage CRB1, complete genome	9530-9561	7	0.781
NZ_CP048875_4	4.10\|1282936\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282936-1282967	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	165792-165823	7	0.781
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	84182-84213	7	0.781
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	842827-842858	7	0.781
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	766417-766448	7	0.781
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	MK376962	Gordonia phage NosilaM, complete genome	49964-49995	7	0.781
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	397996-398027	7	0.781
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP034277	Pectobacterium versatile strain 14A plasmid pPC14A1, complete sequence	4934-4965	7	0.781
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	84182-84213	7	0.781
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	842827-842858	7	0.781
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	766417-766448	7	0.781
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	MK376962	Gordonia phage NosilaM, complete genome	49964-49995	7	0.781
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	397996-398027	7	0.781
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP034277	Pectobacterium versatile strain 14A plasmid pPC14A1, complete sequence	4934-4965	7	0.781
NZ_CP048875_5	5.1\|1294925\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	1294925-1294956	32	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	290869-290900	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	MK494087	Mycobacterium phage DBQu4n, complete genome	17792-17823	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	AP018480	Mycobacterium virus D29 DNA, complete sequence	17801-17832	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	KC787102	Mycobacterium phage Chy1, partial genome	17944-17975	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NC_001900	Mycobacterium phage D29, complete genome	17801-17832	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	MH513985	Mycobacterium phage Tomathan, complete genome	17792-17823	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	AF022214	Mycobacterium virus D29, complete genome	17801-17832	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	KX897981	Mycobacterium phage StarStuff, complete genome	17792-17823	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	MN234169	Mycobacterium phage Naji, complete genome	17792-17823	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	MT310883	Mycobacterium phage D32, complete genome	17792-17823	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NC_021318	Mycobacterium phage Chy5, complete genome	18139-18170	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NC_021338	Mycobacterium phage Chy4, complete genome	17797-17828	7	0.781
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	KX574455	Mycobacterium phage Pomar16, complete genome	17833-17864	7	0.781
NZ_CP048875_5	5.6\|1295230\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295230-1295261	32	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	198607-198638	7	0.781
NZ_CP048875_5	5.7\|1295291\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295291-1295322	32	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	198607-198638	7	0.781
NZ_CP048875_5	5.10\|1295474\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295474-1295505	32	NZ_CP010859	Marinovum algicola DG 898 plasmid pMaD4, complete sequence	59401-59432	7	0.781
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	494987-495017	7	0.774
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	585768-585798	7	0.774
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	406194-406224	7	0.774
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1554400-1554430	7	0.774
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1017254-1017284	7	0.774
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1482465-1482495	7	0.774
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1614401-1614431	7	0.774
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	893552-893582	7	0.774
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	785703-785733	7	0.774
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1346681-1346711	7	0.774
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1325133-1325163	7	0.774
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP021374	Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence	280960-280990	7	0.774
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	335145-335175	7	0.774
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	494987-495017	7	0.774
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	585768-585798	7	0.774
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	406194-406224	7	0.774
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1554400-1554430	7	0.774
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1017254-1017284	7	0.774
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1482465-1482495	7	0.774
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1614401-1614431	7	0.774
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	893552-893582	7	0.774
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	785703-785733	7	0.774
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1346681-1346711	7	0.774
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1325133-1325163	7	0.774
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP021374	Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence	280960-280990	7	0.774
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	335145-335175	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	1172261-1172291	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	1596292-1596322	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	920192-920222	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1141504-1141534	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	1521427-1521457	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1568811-1568841	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	1172261-1172291	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	167896-167926	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	343729-343759	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	233018-233048	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	152672-152702	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1464590-1464620	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	692708-692738	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	57419-57449	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1579570-1579600	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	72665-72695	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	1152228-1152258	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	155659-155689	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	245748-245778	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	158434-158464	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	223196-223226	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	669385-669415	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1405686-1405716	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1522183-1522213	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1071798-1071828	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	1110483-1110513	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	365427-365457	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	153023-153053	7	0.774
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	155659-155689	7	0.774
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	1172260-1172291	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	1596291-1596322	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	155659-155690	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	245748-245779	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	158434-158465	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	920191-920222	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	223196-223227	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1141503-1141534	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	1521426-1521457	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1568810-1568841	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	1172260-1172291	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	669385-669416	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1405686-1405717	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	167895-167926	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	343728-343759	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	233017-233048	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	152671-152702	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1522183-1522214	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1464589-1464620	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1071798-1071829	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	692707-692738	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	1110483-1110514	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	57418-57449	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1579569-1579600	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	365427-365458	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	72664-72695	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	153023-153054	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	155659-155690	7	0.781
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	1152227-1152258	7	0.781
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	490775-490807	8	0.758
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	6405-6437	8	0.758
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	6405-6437	8	0.758
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	6310-6342	8	0.758
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP035095	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence	241732-241764	8	0.758
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP045274	Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence	126639-126671	8	0.758
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP032530	Bacillus megaterium NCT-2 plasmid pNCT2_2, complete sequence	44559-44591	8	0.758
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	74678-74710	8	0.758
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP009921	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence	235209-235241	8	0.758
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_KJ588780	Achromobacter xylosoxidans strain A22732 plasmid pA22732-IMP, complete sequence	37128-37159	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_KP289281	Pseudomonas sp. EGD-AKN5 plasmid unnamed, complete sequence	8484-8515	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_MN366359	Bacterium plasmid pALTS31, complete sequence	34720-34751	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP015373	Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence	29385-29416	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	AGRM01000006	Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A1, complete sequence, whole genome shotgun sequence	29907-29938	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_017908	Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence	34842-34873	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	AJ863570	Uncultured bacterium IncP-1beta multiresistance plasmid pB8	49659-49690	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	35239-35270	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	1011981-1012012	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	KU238092	Uncultured bacterium plasmid pDTC28, complete sequence	33838-33869	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	AP018709	Uncultured bacterium plasmid pSN1104-59 DNA, complete sequence	9905-9936	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JX469834	Uncultured bacterium plasmid pDS3, complete sequence	32465-32496	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JX469831	Uncultured bacterium plasmid pKSP212, complete sequence	39309-39340	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JN106172	Uncultured bacterium plasmid pAKD29, complete sequence	32306-32337	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JN106173	Uncultured bacterium plasmid pAKD31, complete sequence	33484-33515	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JN106174	Uncultured bacterium plasmid pAKD33, complete sequence	33487-33518	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_004956	Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence	8484-8515	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JN106164	Uncultured bacterium plasmid pAKD1, complete sequence	45634-45665	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JN106165	Uncultured bacterium plasmid pAKD14, complete sequence	33484-33515	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JN106166	Uncultured bacterium plasmid pAKD15, complete sequence	33484-33515	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JN106168	Uncultured bacterium plasmid pAKD17, complete sequence	33484-33515	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JN106169	Uncultured bacterium plasmid pAKD18, complete sequence	33469-33500	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_014911	Alicycliphilus denitrificans BC plasmid pALIDE02, complete sequence	16052-16083	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_016978	Comamonas testosteroni plasmid pI2, complete sequence	59910-59941	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	MG879028	Uncultured bacterium plasmid pEG1-1, complete sequence	65692-65723	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP021650	Acidovorax sp. T1 plasmid p2-T1, complete sequence	15789-15820	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	KF743817	Proteus mirabilis plasmid R772, complete sequence	32399-32430	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	KF743818	Bordetella bronchiseptica plasmid R906, complete sequence	34617-34648	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	JX486125	Uncultured bacterium plasmid pRWC72a, complete sequence	44194-44225	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP019238	Rhodoferax koreense strain DCY-110 plasmid unnamed2	33238-33269	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP038640	Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence	67839-67870	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	AJ639924	Uncultured bacterium plasmid pB3 complete genome	49377-49408	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	KC170279	Uncultured bacterium plasmid pMBUI8, complete sequence	44453-44484	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	KU356987	Variovorax paradoxus plasmid pBS64, complete sequence	49884-49915	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	KU356988	Variovorax paradoxus plasmid pHB44, complete sequence	48589-48620	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP009797	Burkholderia ambifaria AMMD plasmid pBII_1, complete sequence	35224-35255	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_013176	Pseudomonas putida plasmid pW2, complete sequence	28604-28635	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_019312	Delftia sp. KV29 plasmid pKV29, complete sequence	17982-18013	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_019320	Variovorax sp. DB1 plasmid pDB1, complete sequence	1644-1675	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP017455	Dickeya solani strain PPO 9019 plasmid unnamed, complete sequence	42315-42346	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_021077	Comamonas sp. 7D-2 plasmid pBHB, complete sequence	86932-86963	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_007337	Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence	1644-1675	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_024998	Acidovorax avenae subsp. avenae plasmid pAAA83 DNA, complete sequence, strain: 83	5914-5945	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_MH053445	Pseudomonas aeruginosa strain PA1280 plasmid pICP-4GES, complete sequence	17127-17158	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_MN366358	Bacterium plasmid pALTS29, complete sequence	46118-46149	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_005088	Delftia acidovorans B plasmid pUO1, complete sequence	60114-60145	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_008385	Burkholderia ambifaria AMMD plasmid unnamed1, complete sequence	11206-11237	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP015090	Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence	93910-93941	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP039425	Citricoccus sp. SGAir0253 plasmid unnamed1, complete sequence	10528-10559	8	0.75
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP039430	Citricoccus sp. SGAir0453 plasmid unnamed1, complete sequence	10528-10559	8	0.75
NZ_CP048875_4	4.4\|1282569\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282569-1282600	32	NZ_CP017753	Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence	14450-14481	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP026279	Klebsiella oxytoca strain KONIH2 plasmid pKOR-b08d, complete sequence	30566-30597	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP050068	Klebsiella aerogenes strain 035 plasmid p35, complete sequence	337198-337229	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP026274	Klebsiella oxytoca strain KONIH4 plasmid pKPC-4b66, complete sequence	191987-192018	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP027617	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed5, complete sequence	44458-44489	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP029112	Escherichia coli strain AR436 plasmid unnamed3, complete sequence	24218-24249	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP026205	Escherichia coli strain ECONIH5 plasmid pKPC-e3ee, complete sequence	30196-30227	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP026172	Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence	137284-137315	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP026184	Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-af73, complete sequence	6784-6815	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP026398	Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence	235722-235753	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP008843	Klebsiella michiganensis strain M1 plasmid pKOXM1B, complete sequence	142619-142650	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP017452	Klebsiella sp. LTGPAF-6F plasmid unnamed2, complete sequence	82629-82660	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP042547	Klebsiella michiganensis strain C52 plasmid pC52_002, complete sequence	89809-89840	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP011646	Klebsiella pneumoniae strain CAV1596 plasmid pKPC_CAV1596-97, complete sequence	67291-67322	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP027125	Escherichia coli strain AR_0374 plasmid unnamed3	31200-31231	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	NZ_CP010382	Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-53.129kb, complete sequence	31427-31458	8	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	MH153808	Gordonia phage Petra, complete genome	6292-6323	8	0.75
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP034781	Pseudomonas sp. MPC6 plasmid pMPC6-47K, complete sequence	952-983	8	0.75
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	388934-388965	8	0.75
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	464975-465006	8	0.75
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	351102-351133	8	0.75
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	MH153808	Gordonia phage Petra, complete genome	40137-40168	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP016080	Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence	197953-197984	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	401169-401200	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	418591-418622	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	397357-397388	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	402835-402866	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	402825-402856	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	401199-401230	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	401199-401230	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	401191-401222	8	0.75
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	MH617108	Microviridae sp. isolate ctci907, complete genome	550-581	8	0.75
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP034781	Pseudomonas sp. MPC6 plasmid pMPC6-47K, complete sequence	952-983	8	0.75
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	388934-388965	8	0.75
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	464975-465006	8	0.75
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	351102-351133	8	0.75
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	MH153808	Gordonia phage Petra, complete genome	40137-40168	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP016080	Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence	197953-197984	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	401169-401200	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	418591-418622	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	397357-397388	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	402835-402866	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	402825-402856	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	401199-401230	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	401199-401230	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	401191-401222	8	0.75
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	MH617108	Microviridae sp. isolate ctci907, complete genome	550-581	8	0.75
NZ_CP048875_5	5.3\|1295047\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295047-1295078	32	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	121664-121695	8	0.75
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	1017078-1017109	8	0.75
NZ_CP048875_5	5.5\|1295169\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295169-1295200	32	MH019215	Streptomyces phage Yara, complete genome	13890-13921	8	0.75
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	286599-286629	8	0.742
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	995020-995050	8	0.742
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1006998-1007028	8	0.742
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	524353-524383	8	0.742
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	MG711466	Faecalibacterium phage FP_Toutatis, complete genome	24166-24196	8	0.742
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	627273-627303	8	0.742
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	527382-527412	8	0.742
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	527372-527402	8	0.742
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	NZ_CP019314	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence	51621-51652	8	0.75
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1640850-1640880	8	0.742
NZ_CP048875_7	7.3\|2822108\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822108-2822138	31	MK929790	Caulobacter phage RW, complete genome	35165-35195	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP033508	Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743a, complete sequence	62112-62142	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP033369	Mesorhizobium loti strain SU343 plasmid pMLSU343a, complete sequence	62112-62142	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP016080	Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence	286205-286235	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP048426	Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence	114847-114877	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	464986-465016	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP050092	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence	387918-387948	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP050081	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence	238654-238684	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP022542	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence	88063-88093	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	688571-688601	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	210911-210941	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NC_002682	Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence	34827-34857	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	300548-300578	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	1505-1535	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	110671-110701	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	847904-847934	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	57157-57187	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	989273-989303	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	421422-421452	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	235296-235326	8	0.742
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	586409-586439	8	0.742
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	286599-286629	8	0.742
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	995020-995050	8	0.742
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1006998-1007028	8	0.742
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	524353-524383	8	0.742
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	MG711466	Faecalibacterium phage FP_Toutatis, complete genome	24166-24196	8	0.742
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	627273-627303	8	0.742
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	527382-527412	8	0.742
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	527372-527402	8	0.742
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	NZ_CP019314	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence	51621-51652	8	0.75
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1640850-1640880	8	0.742
NZ_CP048875_7	7.7\|2822109\|31\|NZ_CP048875\|PILER-CR	2822109-2822139	31	MK929790	Caulobacter phage RW, complete genome	35165-35195	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP033508	Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743a, complete sequence	62112-62142	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP033369	Mesorhizobium loti strain SU343 plasmid pMLSU343a, complete sequence	62112-62142	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP016080	Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence	286205-286235	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP048426	Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence	114847-114877	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	464986-465016	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP050092	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence	387918-387948	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP050081	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence	238654-238684	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP022542	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence	88063-88093	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	688571-688601	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	210911-210941	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NC_002682	Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence	34827-34857	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	300548-300578	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	1505-1535	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	110671-110701	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	847904-847934	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	57157-57187	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	989273-989303	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	421422-421452	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	235296-235326	8	0.742
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	586409-586439	8	0.742
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1073927-1073957	8	0.742
NZ_CP048875_8	8.2\|2831836\|31\|NZ_CP048875\|CRISPRCasFinder	2831836-2831866	31	NZ_AP014708	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_4p, complete sequence	42372-42402	8	0.742
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1073926-1073957	8	0.75
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	689981-690012	8	0.75
NZ_CP048875_16	16.11\|6526242\|36\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	6526242-6526277	36	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	573930-573965	8	0.778
NZ_CP048875_17	17.9\|6535561\|35\|NZ_CP048875\|PILER-CR,CRISPRCasFinder,CRT	6535561-6535595	35	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	610027-610061	8	0.771
NZ_CP048875_17	17.10\|6535625\|37\|NZ_CP048875\|PILER-CR,CRISPRCasFinder,CRT	6535625-6535661	37	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1048272-1048308	8	0.784
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP045296	Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence	211197-211229	9	0.727
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	975797-975828	9	0.719
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2341435-2341466	9	0.719
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	281925-281956	9	0.719
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	NZ_CP018077	Sulfitobacter sp. AM1-D1 plasmid unnamed1, complete sequence	152849-152880	9	0.719
NZ_CP048875_4	4.3\|1282508\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282508-1282539	32	MH834622	Arthrobacter phage Noely, complete genome	4123-4154	9	0.719
NZ_CP048875_4	4.10\|1282936\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282936-1282967	32	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	581365-581396	9	0.719
NZ_CP048875_4	4.10\|1282936\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282936-1282967	32	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	467169-467200	9	0.719
NZ_CP048875_4	4.11\|1282997\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282997-1283028	32	MT498036	Gordonia Phage Zitch, complete genome	44413-44444	9	0.719
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	CP054928	Streptomyces fulvissimus strain NA06532 plasmid unnamed2, complete sequence	255-286	9	0.719
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP026695	Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP3, complete sequence	2728-2759	9	0.719
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	415954-415985	9	0.719
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	MT723942	Gordonia phage Archis, complete genome	30265-30296	9	0.719
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP045319	Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence	9651-9682	9	0.719
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP032676	Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence	106435-106466	9	0.719
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	226374-226405	9	0.719
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	634117-634148	9	0.719
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	332518-332549	9	0.719
NZ_CP048875_4	4.14\|1283180\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283180-1283211	32	NC_028659	Klebsiella phage vB_KpnM_KB57, complete genome	63954-63985	9	0.719
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	CP054928	Streptomyces fulvissimus strain NA06532 plasmid unnamed2, complete sequence	255-286	9	0.719
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP026695	Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP3, complete sequence	2728-2759	9	0.719
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	415954-415985	9	0.719
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	MT723942	Gordonia phage Archis, complete genome	30265-30296	9	0.719
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP045319	Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence	9651-9682	9	0.719
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP032676	Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence	106435-106466	9	0.719
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	226374-226405	9	0.719
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	634117-634148	9	0.719
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	332518-332549	9	0.719
NZ_CP048875_4	4.17\|1283363\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283363-1283394	32	NC_028659	Klebsiella phage vB_KpnM_KB57, complete genome	63954-63985	9	0.719
NZ_CP048875_4	4.19\|1283485\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283485-1283516	32	NZ_CP021816	Sinorhizobium meliloti strain M270 plasmid accessoryB, complete sequence	19757-19788	9	0.719
NZ_CP048875_5	5.1\|1294925\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	1294925-1294956	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	388721-388752	9	0.719
NZ_CP048875_5	5.3\|1295047\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295047-1295078	32	NZ_CP020813	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed4, complete sequence	56413-56444	9	0.719
NZ_CP048875_5	5.3\|1295047\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295047-1295078	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	983232-983263	9	0.719
NZ_CP048875_5	5.9\|1295413\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295413-1295444	32	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	869558-869589	9	0.719
NZ_CP048875_5	5.9\|1295413\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295413-1295444	32	NC_022044	Paracoccus aminophilus JCM 7686 plasmid pAMI6, complete sequence	203943-203974	9	0.719
NZ_CP048875_5	5.11\|1295535\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295535-1295566	32	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	443667-443698	9	0.719
NZ_CP048875_7	7.1\|2821985\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2821985-2822015	31	NZ_CP026745	Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence	115577-115607	9	0.71
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	193570-193601	9	0.719
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	247056-247087	9	0.719
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	138683-138714	9	0.719
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	372730-372760	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	466220-466250	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	522681-522711	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	846757-846787	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	334692-334722	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	257084-257114	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	393504-393534	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	378939-378969	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	539600-539630	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	285969-285999	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	240211-240241	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	1235493-1235523	9	0.71
NZ_CP048875_7	7.4\|2822169\|31\|NZ_CP048875\|CRISPRCasFinder,CRT	2822169-2822199	31	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	539600-539630	9	0.71
NZ_CP048875_7	7.5\|2821986\|31\|NZ_CP048875\|PILER-CR	2821986-2822016	31	NZ_CP026745	Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence	115577-115607	9	0.71
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	193570-193601	9	0.719
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	247056-247087	9	0.719
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	138683-138714	9	0.719
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	372730-372760	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	466220-466250	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	522681-522711	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	846757-846787	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	334692-334722	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	257084-257114	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	393504-393534	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	378939-378969	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	539600-539630	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	285969-285999	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	240211-240241	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	1235493-1235523	9	0.71
NZ_CP048875_7	7.8\|2822170\|31\|NZ_CP048875\|PILER-CR	2822170-2822200	31	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	539600-539630	9	0.71
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP006991	Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence	298246-298277	9	0.719
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_AP014708	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_4p, complete sequence	42372-42403	9	0.719
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	NZ_CP021128	Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence	248241-248272	9	0.719
NZ_CP048875_8	8.5\|2831835\|32\|NZ_CP048875\|CRT	2831835-2831866	32	CP007645	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence	304847-304878	9	0.719
NZ_CP048875_9	9.1\|2949747\|34\|NZ_CP048875\|CRISPRCasFinder	2949747-2949780	34	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	144018-144051	9	0.735
NZ_CP048875_9	9.1\|2949747\|34\|NZ_CP048875\|CRISPRCasFinder	2949747-2949780	34	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1272629-1272662	9	0.735
NZ_CP048875_15	15.2\|4805303\|38\|NZ_CP048875\|CRISPRCasFinder	4805303-4805340	38	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	307254-307291	9	0.763
NZ_CP048875_16	16.3\|6525723\|36\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	6525723-6525758	36	NZ_CP029211	Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence	254985-255020	9	0.75
NZ_CP048875_16	16.11\|6526242\|36\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	6526242-6526277	36	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	599649-599684	9	0.75
NZ_CP048875_16	16.11\|6526242\|36\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	6526242-6526277	36	NZ_CP029453	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence	204302-204337	9	0.75
NZ_CP048875_16	16.11\|6526242\|36\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	6526242-6526277	36	NZ_CP029453	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence	296863-296898	9	0.75
NZ_CP048875_17	17.3\|6535168\|36\|NZ_CP048875\|PILER-CR,CRISPRCasFinder,CRT	6535168-6535203	36	NZ_CP033429	Burkholderia gladioli strain Burkholderia gladioli Co14 plasmid p1, complete sequence	78819-78854	9	0.75
NZ_CP048875_4	4.5\|1282630\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282630-1282661	32	MN512538	Vibrio phage Seahorse, complete genome	34369-34400	10	0.688
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	365516-365547	10	0.688
NZ_CP048875_4	4.13\|1283119\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283119-1283150	32	NC_009508	Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence	38523-38554	10	0.688
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	365516-365547	10	0.688
NZ_CP048875_4	4.16\|1283302\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283302-1283333	32	NC_009508	Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence	38523-38554	10	0.688
NZ_CP048875_5	5.9\|1295413\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295413-1295444	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	272408-272439	10	0.688
NZ_CP048875_5	5.11\|1295535\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295535-1295566	32	NZ_CP021368	Acidovorax carolinensis strain P4 plasmid pACP4.2, complete sequence	120207-120238	10	0.688
NZ_CP048875_5	5.11\|1295535\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1295535-1295566	32	NZ_CP021364	Acidovorax carolinensis strain P3 plasmid pACP3.2, complete sequence	139281-139312	10	0.688
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	75623-75654	10	0.688
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	75623-75654	10	0.688
NZ_CP048875_9	9.1\|2949747\|34\|NZ_CP048875\|CRISPRCasFinder	2949747-2949780	34	MT310894	Microbacterium phage Tempo, complete genome	42996-43029	10	0.706
NZ_CP048875_17	17.9\|6535561\|35\|NZ_CP048875\|PILER-CR,CRISPRCasFinder,CRT	6535561-6535595	35	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1683985-1684019	10	0.714
NZ_CP048875_4	4.1\|1282385\|33\|NZ_CP048875\|CRISPRCasFinder,CRT	1282385-1282417	33	NZ_CP026738	Bacillus megaterium strain YC4-R4 plasmid unnamed2	139159-139191	11	0.667
NZ_CP048875_4	4.6\|1282691\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1282691-1282722	32	NZ_AP017296	Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence	171970-172001	11	0.656
NZ_CP048875_4	4.12\|1283058\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283058-1283089	32	NZ_CP033873	Caulobacter sp. FWC26 plasmid p1, complete sequence	80104-80135	11	0.656
NZ_CP048875_4	4.15\|1283241\|32\|NZ_CP048875\|CRISPRCasFinder,CRT,PILER-CR	1283241-1283272	32	NZ_CP033873	Caulobacter sp. FWC26 plasmid p1, complete sequence	80104-80135	11	0.656
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	NZ_CP020948	Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence	167073-167104	11	0.656
NZ_CP048875_7	7.2\|2822046\|32\|NZ_CP048875\|CRISPRCasFinder,CRT	2822046-2822077	32	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	243919-243950	11	0.656
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	NZ_CP020948	Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence	167073-167104	11	0.656
NZ_CP048875_7	7.6\|2822047\|32\|NZ_CP048875\|PILER-CR	2822047-2822078	32	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	243919-243950	11	0.656

1. spacer 4.9|1282875|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to CP054922 (Streptomyces sp. NA03103 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

tacgcctccgtccacggcgggtcaggggtgtc	CRISPR spacer
tacgcctccgtccacggcgggtccggggtgta	Protospacer
*********************** *******

2. spacer 8.1|2831775|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP015446 (Streptomyces sp. S8 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.935

gtgtggctccactggaatgccctgtcgagcc	CRISPR spacer
gtgtgactccactggaacgccctgtcgagcc	Protospacer
*****.***********.*************

3. spacer 10.1|3073657|26|NZ_CP048875|PILER-CR matches to NZ_CP047145 (Streptomyces sp. HF10 plasmid plas1, complete sequence) position: , mismatch: 2, identity: 0.923

tcggccacagcgtcggggaccactgg	CRISPR spacer
tcgcccacaccgtcggggaccactgg	Protospacer
*** ***** ****************

4. spacer 10.1|3073657|26|NZ_CP048875|PILER-CR matches to NC_007927 (Streptomyces sp. 44414 plasmid pRL2, complete sequence) position: , mismatch: 2, identity: 0.923

tcggccacagcgtcggggaccactgg	CRISPR spacer
tcgcccacagtgtcggggaccactgg	Protospacer
*** ******.***************

5. spacer 8.4|2831774|32|NZ_CP048875|CRT matches to NZ_CP015446 (Streptomyces sp. S8 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

agtgtggctccactggaatgccctgtcgagcc	CRISPR spacer
ggtgtgactccactggaacgccctgtcgagcc	Protospacer
.*****.***********.*************

6. spacer 12.2|4312939|24|NZ_CP048875|CRISPRCasFinder matches to NZ_CP016313 (Thermus brockianus strain GE-1 plasmid pTB1, complete sequence) position: , mismatch: 3, identity: 0.875

ggctgtgcggccacctggccatgt	CRISPR spacer
agctgtgcggccacccggccatgg	Protospacer
.**************.*******

7. spacer 12.2|4312939|24|NZ_CP048875|CRISPRCasFinder matches to NZ_LT559121 (Nonomuraea gerenzanensis isolate nono1 plasmid II, complete sequence) position: , mismatch: 3, identity: 0.875

ggctgtgcggccacctggccatgt	CRISPR spacer
cgctgtgcggccagccggccatgt	Protospacer
 ************ *.********

8. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KY365739 (Streptomyces phage BabyGotBac, complete genome) position: , mismatch: 4, identity: 0.875

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
atcctgcccatcctgccgccgctggtggacgc	Protospacer
 * ***** ******** **************

9. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH178382 (Streptomyces phage Salete, complete genome) position: , mismatch: 4, identity: 0.875

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
atcctgcccatcctgccgccgctggtggacgc	Protospacer
 * ***** ******** **************

10. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KU189325 (Streptomyces phage Maih, complete genome) position: , mismatch: 4, identity: 0.875

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
atcctgcccatcctgccgccgctggtggacgc	Protospacer
 * ***** ******** **************

11. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH178381 (Streptomyces phage BayC, complete genome) position: , mismatch: 4, identity: 0.875

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
atcctgcccatcctgccgccgctggtggacgc	Protospacer
 * ***** ******** **************

12. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KP876466 (Streptomyces phage TP1604, complete genome) position: , mismatch: 4, identity: 0.875

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
atcctgcccatcctgccgccgctggtggacgc	Protospacer
 * ***** ******** **************

13. spacer 10.2|3073718|26|NZ_CP048875|PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 4, identity: 0.846

cgggcacccggcggttggcgggccgc	CRISPR spacer
cgggcacccggcggctggtgggcggt	Protospacer
**************.***.**** *.

14. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.844

gaaggcgtccagcgtcgcggcaagctggtgct-	CRISPR spacer
gatggcgtcaagcgtcgcggcaagc-gctgcct	Protospacer
** ****** *************** * ***.

15. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 5, identity: 0.844

gaaggcgtccagcgtcgcggcaagctggtgct--	CRISPR spacer
gacggcgtccagcgtcgcggcgag--ggtgccgg	Protospacer
** ******************.**  *****.

16. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.844

gaaggcgtccagcgtcgcggcaagctggtgct-	CRISPR spacer
gatggcgtcaagcgtcgcggcaagc-gctgcct	Protospacer
** ****** *************** * ***.

17. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 5, identity: 0.844

gaaggcgtccagcgtcgcggcaagctggtgct--	CRISPR spacer
gacggcgtccagcgtcgcggcgag--ggtgccgg	Protospacer
** ******************.**  *****.

18. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.839

tcgcagcagccggcgcccaccgcgctgcggc-	CRISPR spacer
tcgctgccgccggcgcccaccgcggc-cggcg	Protospacer
**** ** **************** . ****

19. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to MH590599 (Streptomyces phage Karimac, complete genome) position: , mismatch: 5, identity: 0.844

tcatgat-gccgaaccggctgctgagcacgagg	CRISPR spacer
-gaagatggccgaacaggctgctgagcgcgagg	Protospacer
  * *** ******* ***********.*****

20. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to MN428060 (Streptomyces phage IchabodCrane, complete genome) position: , mismatch: 5, identity: 0.844

tcatgat-gccgaaccggctgctgagcacgagg	CRISPR spacer
-gaagatggccgaacaggctgctgagcgcgagg	Protospacer
  * *** ******* ***********.*****

21. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to MH576968 (Streptomyces phage Wofford, complete genome) position: , mismatch: 5, identity: 0.844

tcatgat-gccgaaccggctgctgagcacgagg	CRISPR spacer
-gaagatggccgaacaggctgctgagcgcgagg	Protospacer
  * *** ******* ***********.*****

22. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.839

tcgcagcagccggcgcccaccgcgctgcggc-	CRISPR spacer
tcgctgccgccggcgcccaccgcggc-cggcg	Protospacer
**** ** **************** . ****

23. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to MH590599 (Streptomyces phage Karimac, complete genome) position: , mismatch: 5, identity: 0.844

tcatgat-gccgaaccggctgctgagcacgagg	CRISPR spacer
-gaagatggccgaacaggctgctgagcgcgagg	Protospacer
  * *** ******* ***********.*****

24. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to MN428060 (Streptomyces phage IchabodCrane, complete genome) position: , mismatch: 5, identity: 0.844

tcatgat-gccgaaccggctgctgagcacgagg	CRISPR spacer
-gaagatggccgaacaggctgctgagcgcgagg	Protospacer
  * *** ******* ***********.*****

25. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to MH576968 (Streptomyces phage Wofford, complete genome) position: , mismatch: 5, identity: 0.844

tcatgat-gccgaaccggctgctgagcacgagg	CRISPR spacer
-gaagatggccgaacaggctgctgagcgcgagg	Protospacer
  * *** ******* ***********.*****

26. spacer 10.1|3073657|26|NZ_CP048875|PILER-CR matches to MK977705 (Gordonia Phage Mollymur, complete genome) position: , mismatch: 5, identity: 0.808

tcggccacagcgtcggggaccactgg	CRISPR spacer
tcggccaccgcgtcggggaccaggat	Protospacer
******** *************  .

27. spacer 10.2|3073718|26|NZ_CP048875|PILER-CR matches to NZ_CP022192 (Yangia pacifica strain YSBP01 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.808

cgggcacccggcggttggcgggccgc	CRISPR spacer
cgggcacacggcggtcggcgggctcg	Protospacer
******* *******.*******.

28. spacer 10.2|3073718|26|NZ_CP048875|PILER-CR matches to AY320035 (Bacteriophage VWB, complete genome) position: , mismatch: 5, identity: 0.808

cgggcacccggcggttggcgggccgc	CRISPR spacer
ccggcacccggcggttgccgggcttg	Protospacer
* *************** *****.

29. spacer 10.2|3073718|26|NZ_CP048875|PILER-CR matches to NC_005345 (Streptomyces phage VWB, complete genome) position: , mismatch: 5, identity: 0.808

cgggcacccggcggttggcgggccgc	CRISPR spacer
ccggcacccggcggttgccgggcttg	Protospacer
* *************** *****.

30. spacer 4.6|1282691|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011666 (Streptomyces sp. Mg1 plasmid pSMg1-2, complete sequence) position: , mismatch: 6, identity: 0.812

tgccccgggagccctccatctctggcagggtg	CRISPR spacer
cgccccgggagccctccagctcgggcagccgg	Protospacer
.***************** *** *****   *

31. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to CP053333 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

accgagttggcccaggagccgga----gccggagcc	CRISPR spacer
accgagtttgcccaggagctggagaacgccgg----	Protospacer
******** **********.***    *****

32. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to CP053333 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

accgagttggcccaggagccgga----gccggagcc	CRISPR spacer
accgagtttgcccaggagctggagaacgccgg----	Protospacer
******** **********.***    *****

33. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050835 (Klebsiella pneumoniae strain Bckp021 plasmid pBckp021-1, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

34. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to LR134252 (Klebsiella aerogenes strain NCTC9997 genome assembly, plasmid: 2) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

35. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040862 (Klebsiella pneumoniae strain Xen39 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

36. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007734 (Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-262, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

37. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026186 (Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-3967, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

38. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031614 (Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C1, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

39. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018361 (Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

40. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014952 (Klebsiella oxytoca strain JKo3 plasmid pKO_JKo3_1, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

41. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014763 (Klebsiella pneumoniae strain KPNIH39 plasmid pKPN-332, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

42. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
ctgctgctgatcctgccccggctgatctaccc	Protospacer
*******.*********** ****.*  ** *

43. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MN661402 (Klebsiella quasipneumoniae strain KP18-31 plasmid pKP18-31-IMP,KPC, complete sequence) position: , mismatch: 6, identity: 0.812

ctgctgccgatcctgcccccgctggtggacgc----	CRISPR spacer
ctgctgccgatcctcgccccgct----gacgctgct	Protospacer
**************  *******    *****

44. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 6, identity: 0.806

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
tggcggttgccggcgaccaccgcgcggcggc	Protospacer
* **.*. ******* ********* *****

45. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.806

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gccacggtgaccggcgagacggccccgggct	Protospacer
* ************ *******.*****  .

46. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 6, identity: 0.806

gacacggtgaccggggagacggtc----ccggtgc	CRISPR spacer
gacacggtgaccggagcgacggtcaattccg----	Protospacer
**************.* *******    ***

47. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 6, identity: 0.806

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
tggcggttgccggcgaccaccgcgcggcggc	Protospacer
* **.*. ******* ********* *****

48. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.806

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gccacggtgaccggcgagacggccccgggct	Protospacer
* ************ *******.*****  .

49. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 6, identity: 0.806

gacacggtgaccggggagacggtc----ccggtgc	CRISPR spacer
gacacggtgaccggagcgacggtcaattccg----	Protospacer
**************.* *******    ***

50. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.806

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
ccgccgcctccctcggcaagagcgtctgcgt	Protospacer
.*******************.**. *.*.**

51. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP012653 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK07, complete sequence) position: , mismatch: 7, identity: 0.788

ggtctgcttctgctgctgtttcagcagattgat-	CRISPR spacer
tctctgcttctgctggtgtttcacca-tttgaca	Protospacer
  ************* ******* **  ****.

52. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.781

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
gccggcggcctccagggtggccttgcggtcgg	Protospacer
 ************* ********* * * *

53. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_017806 (Deinococcus gobiensis I-0 plasmid P5, complete sequence) position: , mismatch: 7, identity: 0.781

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
cccggcggcctccccgatggcctgaccctcca	Protospacer
************* **.******  **  **

54. spacer 4.9|1282875|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_023606 (Mycobacterium phage CRB1, complete genome) position: , mismatch: 7, identity: 0.781

tacgcctccgtccacggcgggtcaggggtgtc	CRISPR spacer
gacgcctacgtccacggccggtcatacgtgac	Protospacer
 ****** ********** ***** . *** *

55. spacer 4.10|1282936|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 7, identity: 0.781

cgggcgtgctcgattacggcgtgcgcgcgttt	CRISPR spacer
tgagcgtgctcgaatacggggtgcgcgtgctg	Protospacer
.*.********** ***** *******.*.*

56. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
acgagcgtggtcccggagccggagccggagcc	Protospacer
** ..  ***.** ******************

57. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
cccagcctgggcgaggagccggagccggagcc	Protospacer
 **.. .*** * *******************

58. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
cccagcctgggcgaggagccggagccggagcc	Protospacer
 **.. .*** * *******************

59. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MK376962 (Gordonia phage NosilaM, complete genome) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
ggctatgtggccgaagagccggagccggagcc	Protospacer
. * *  ***** *.*****************

60. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
agcacggcggccgaggagcctgagccggagcc	Protospacer
* *. * .**** ******* ***********

61. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034277 (Pectobacterium versatile strain 14A plasmid pPC14A1, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
acaaaacaggcgcagcagccggagccggagcc	Protospacer
** .*.. *** *** ****************

62. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
acgagcgtggtcccggagccggagccggagcc	Protospacer
** ..  ***.** ******************

63. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
cccagcctgggcgaggagccggagccggagcc	Protospacer
 **.. .*** * *******************

64. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
cccagcctgggcgaggagccggagccggagcc	Protospacer
 **.. .*** * *******************

65. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MK376962 (Gordonia phage NosilaM, complete genome) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
ggctatgtggccgaagagccggagccggagcc	Protospacer
. * *  ***** *.*****************

66. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
agcacggcggccgaggagcctgagccggagcc	Protospacer
* *. * .**** ******* ***********

67. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034277 (Pectobacterium versatile strain 14A plasmid pPC14A1, complete sequence) position: , mismatch: 7, identity: 0.781

accgagttggcccaggagccggagccggagcc	CRISPR spacer
acaaaacaggcgcagcagccggagccggagcc	Protospacer
** .*.. *** *** ****************

68. spacer 5.1|1294925|32|NZ_CP048875|CRISPRCasFinder,CRT matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 7, identity: 0.781

aacggat--ctcctgggccggtgtggtcacggcc	CRISPR spacer
--ccactcgcccctcggccggtgtggtcacggcc	Protospacer
  * . *  *.*** *******************

69. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MK494087 (Mycobacterium phage DBQu4n, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

70. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to AP018480 (Mycobacterium virus D29 DNA, complete sequence) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

71. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KC787102 (Mycobacterium phage Chy1, partial genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

72. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_001900 (Mycobacterium phage D29, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

73. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH513985 (Mycobacterium phage Tomathan, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

74. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to AF022214 (Mycobacterium virus D29, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

75. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KX897981 (Mycobacterium phage StarStuff, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

76. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MN234169 (Mycobacterium phage Naji, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

77. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MT310883 (Mycobacterium phage D32, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

78. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_021318 (Mycobacterium phage Chy5, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

79. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_021338 (Mycobacterium phage Chy4, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

80. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KX574455 (Mycobacterium phage Pomar16, complete genome) position: , mismatch: 7, identity: 0.781

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
attcagccgatgctgcccacgctggtggacag	Protospacer
 * * ****** ****** ***********.

81. spacer 5.6|1295230|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 7, identity: 0.781

atgcgcgagccgcaccacgcgcacaggtggac	CRISPR spacer
ctgcgccagccgcaccacgggcaccactggtc	Protospacer
 ***** ************ **** . *** *

82. spacer 5.7|1295291|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 7, identity: 0.781

atgcgcgagccgcaccacgcgcacaggtggac	CRISPR spacer
ctgcgccagccgcaccacgggcaccactggtc	Protospacer
 ***** ************ **** . *** *

83. spacer 5.10|1295474|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010859 (Marinovum algicola DG 898 plasmid pMaD4, complete sequence) position: , mismatch: 7, identity: 0.781

acggacttcgtctccgagctgtcgcttctcct	CRISPR spacer
gcgcccttcgtggccgagctgtcgcttctggt	Protospacer
.**  ******  ****************  *

84. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcagc--agccggcgcccaccgcgctgcggc	CRISPR spacer
--gccaccaggccggcgccgaccgcgctgccgc	Protospacer
  ** .*  .********* ********** **

85. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 7, identity: 0.774

-tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
cccataac-gccggcgcccagcgccctgcggc	Protospacer
 .*..*.* *********** *** *******

86. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcagcagccggcgcccaccgcgctgcggc-	CRISPR spacer
gtgccgcagccggcgaccaccgcgcc-cagca	Protospacer
 .** ********** *********. *.**

87. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gcgtcgttgaccggggtgacggtcccggtca	Protospacer
*   ** ********* ************

88. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacctgc	Protospacer
 ************* **** ****    ***

89. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gcgtcgttgaccggggtgacggtcccggtca	Protospacer
*   ** ********* ************

90. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacctgc	Protospacer
 ************* **** ****    ***

91. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gacccggcgaccggggagacggtctggcacc	Protospacer
*** ***.****************. *   *

92. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacttgc	Protospacer
 ************* **** ****    ***

93. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacttgc	Protospacer
 ************* **** ****    ***

94. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacctgc	Protospacer
 ************* **** ****    ***

95. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP021374 (Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence) position: , mismatch: 7, identity: 0.774

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
atctggatcgacccgcagaaggccgccgagc	Protospacer
 .**********************  *.  *

96. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 7, identity: 0.774

----tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
gacaccc----tcaacccgcagaaggcgcgcatcc	Protospacer
    .**    **.************* *******

97. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcagc--agccggcgcccaccgcgctgcggc	CRISPR spacer
--gccaccaggccggcgccgaccgcgctgccgc	Protospacer
  ** .*  .********* ********** **

98. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 7, identity: 0.774

-tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
cccataac-gccggcgcccagcgccctgcggc	Protospacer
 .*..*.* *********** *** *******

99. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcagcagccggcgcccaccgcgctgcggc-	CRISPR spacer
gtgccgcagccggcgaccaccgcgcc-cagca	Protospacer
 .** ********** *********. *.**

100. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gcgtcgttgaccggggtgacggtcccggtca	Protospacer
*   ** ********* ************

101. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacctgc	Protospacer
 ************* **** ****    ***

102. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gcgtcgttgaccggggtgacggtcccggtca	Protospacer
*   ** ********* ************

103. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacctgc	Protospacer
 ************* **** ****    ***

104. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gacccggcgaccggggagacggtctggcacc	Protospacer
*** ***.****************. *   *

105. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacttgc	Protospacer
 ************* **** ****    ***

106. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacttgc	Protospacer
 ************* **** ****    ***

107. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.774

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
cacacggtgaccggcgagaaggtcaacctgc	Protospacer
 ************* **** ****    ***

108. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP021374 (Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence) position: , mismatch: 7, identity: 0.774

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
atctggatcgacccgcagaaggccgccgagc	Protospacer
 .**********************  *.  *

109. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 7, identity: 0.774

----tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
gacaccc----tcaacccgcagaaggcgcgcatcc	Protospacer
    .**    **.************* *******

110. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
tcgccgcctcgctcgggaagggcttcggagc	Protospacer
********** ***** ******  * * *.

111. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

112. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
tcgccgcctcgctcgggaagggcttcggagc	Protospacer
********** ***** ******  * * *.

113. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

114. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

115. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

116. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
tcgccgcctcgctcgggaagggcttcggagc	Protospacer
********** ***** ******  * * *.

117. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

118. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
tcgccgcctcgctcgggaagggcttcggagc	Protospacer
********** ***** ******  * * *.

119. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

120. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

121. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

122. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

123. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

124. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

125. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
tcgcggcctcactcggcaagggcttcggcgc	Protospacer
**** ***** ************  * *.*.

126. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
tcgccgcctcgctcgggaagggcttcggagc	Protospacer
********** ***** ******  * * *.

127. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

128. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggca----accgtgt	CRISPR spacer
tcgacgccttcctcggcaagggcgaaacacc----	Protospacer
*** *****.*************.    ***

129. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

130. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

131. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
tcgccgcctcgctcgggaagggcttcggagc	Protospacer
********** ***** ******  * * *.

132. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

133. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

134. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

135. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

136. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

137. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

138. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.774

tcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
tcgccgccgcccccggcaagggc-gcgatgca	Protospacer
******** ***.********** .* .**.

139. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgccgcctcgctcgggaagggcttcggagc	Protospacer
*********** ***** ******  * * *.

140. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

141. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

142. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggca----accgtgt	CRISPR spacer
atcgacgccttcctcggcaagggcgaaacacc----	Protospacer
**** *****.*************.    ***

143. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

144. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgccgcctcgctcgggaagggcttcggagc	Protospacer
*********** ***** ******  * * *.

145. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

146. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

147. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

148. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

149. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgccgcctcgctcgggaagggcttcggagc	Protospacer
*********** ***** ******  * * *.

150. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgccgcctcgctcgggaagggcttcggagc	Protospacer
*********** ***** ******  * * *.

151. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

152. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

153. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgccgcctcgctcgggaagggcttcggagc	Protospacer
*********** ***** ******  * * *.

154. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

155. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

156. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

157. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

158. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

159. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

160. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

161. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

162. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

163. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

164. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgcggcctcactcggcaagggcttcggcgc	Protospacer
***** ***** ************  * *.*.

165. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

166. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt-	CRISPR spacer
atcgccgccgcccccggcaagggc-gcgatgca	Protospacer
********* ***.********** .* .**.

167. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgccgcctcgctcgggaagggcttcggagc	Protospacer
*********** ***** ******  * * *.

168. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 8, identity: 0.758

ggtctgcttctgctgctgtttcagcagattgat	CRISPR spacer
cttctgcttctgctggcgtttcagcagcgggct	Protospacer
  ************* .**********   * *

169. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 8, identity: 0.758

ggtctgcttctgctgctgtttcagcagattgat	CRISPR spacer
cttctgcttctgctggcgtttcagcagcgggct	Protospacer
  ************* .**********   * *

170. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 8, identity: 0.758

ggtctgcttctgctgctgtttcagcagattgat	CRISPR spacer
cttctgcttctgctggcgtttcagcagcgggct	Protospacer
  ************* .**********   * *

171. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 8, identity: 0.758

ggtctgcttctgctgctgtttcagcagattgat	CRISPR spacer
cttctgcttctgctggcgtttcagcagcgggct	Protospacer
  ************* .**********   * *

172. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP035095 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ggtctgcttctgctgctgtttcagca--gattgat	CRISPR spacer
tgtctgcttctgcttttgtttcagcatcacctg--	Protospacer
 ************* .**********  . .**

173. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 8, identity: 0.758

ggtctgcttctgctgctgtttcagca--gattgat	CRISPR spacer
tgtctgcttctgcttttgtttcagcatcacctg--	Protospacer
 ************* .**********  . .**

174. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032530 (Bacillus megaterium NCT-2 plasmid pNCT2_2, complete sequence) position: , mismatch: 8, identity: 0.758

ggtctgcttctgctgctgtttcagca--gattgat	CRISPR spacer
tgtctgcttctgcttttgtttcagcatcacctg--	Protospacer
 ************* .**********  . .**

175. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 8, identity: 0.758

ggtctgcttctgctgctgtttcagcagattgat	CRISPR spacer
cttctgcttctgctggcgtttcagcagcgggct	Protospacer
  ************* .**********   * *

176. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP009921 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence) position: , mismatch: 8, identity: 0.758

ggtctgcttctgctgctgtttcagca--gattgat	CRISPR spacer
tgtctgcttctgcttttgtttcagcatcacctg--	Protospacer
 ************* .**********  . .**

177. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KJ588780 (Achromobacter xylosoxidans strain A22732 plasmid pA22732-IMP, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccacctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

178. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP289281 (Pseudomonas sp. EGD-AKN5 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

179. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN366359 (Bacterium plasmid pALTS31, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

180. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015373 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

181. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to AGRM01000006 (Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A1, complete sequence, whole genome shotgun sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

182. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_017908 (Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

183. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to AJ863570 (Uncultured bacterium IncP-1beta multiresistance plasmid pB8) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccacctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

184. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
cgaggcagcctccacgctggccttcctgagcg	Protospacer
*  ***.********* *********.*. *

185. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
cgaggcagcctccacgctggccttcctgagcg	Protospacer
*  ***.********* *********.*. *

186. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KU238092 (Uncultured bacterium plasmid pDTC28, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccacctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

187. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to AP018709 (Uncultured bacterium plasmid pSN1104-59 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

188. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JX469834 (Uncultured bacterium plasmid pDS3, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

189. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JX469831 (Uncultured bacterium plasmid pKSP212, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccacctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

190. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JN106172 (Uncultured bacterium plasmid pAKD29, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

191. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JN106173 (Uncultured bacterium plasmid pAKD31, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

192. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JN106174 (Uncultured bacterium plasmid pAKD33, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

193. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_004956 (Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

194. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JN106164 (Uncultured bacterium plasmid pAKD1, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccacctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

195. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JN106165 (Uncultured bacterium plasmid pAKD14, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

196. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JN106166 (Uncultured bacterium plasmid pAKD15, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

197. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JN106168 (Uncultured bacterium plasmid pAKD17, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

198. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JN106169 (Uncultured bacterium plasmid pAKD18, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

199. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_014911 (Alicycliphilus denitrificans BC plasmid pALIDE02, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

200. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

201. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MG879028 (Uncultured bacterium plasmid pEG1-1, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccacctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

202. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021650 (Acidovorax sp. T1 plasmid p2-T1, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

203. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KF743817 (Proteus mirabilis plasmid R772, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

204. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KF743818 (Bordetella bronchiseptica plasmid R906, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

205. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to JX486125 (Uncultured bacterium plasmid pRWC72a, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccacctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

206. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019238 (Rhodoferax koreense strain DCY-110 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

207. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038640 (Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

208. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to AJ639924 (Uncultured bacterium plasmid pB3 complete genome) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
tgcggcggccgcctcggtggccttccgctgct	Protospacer
. ******** ** ************    **

209. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KC170279 (Uncultured bacterium plasmid pMBUI8, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

210. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KU356987 (Variovorax paradoxus plasmid pBS64, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

211. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to KU356988 (Variovorax paradoxus plasmid pHB44, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

212. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009797 (Burkholderia ambifaria AMMD plasmid pBII_1, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

213. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_013176 (Pseudomonas putida plasmid pW2, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

214. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_019312 (Delftia sp. KV29 plasmid pKV29, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

215. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_019320 (Variovorax sp. DB1 plasmid pDB1, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

216. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017455 (Dickeya solani strain PPO 9019 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

217. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_021077 (Comamonas sp. 7D-2 plasmid pBHB, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

218. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_007337 (Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

219. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_024998 (Acidovorax avenae subsp. avenae plasmid pAAA83 DNA, complete sequence, strain: 83) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccacctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

220. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH053445 (Pseudomonas aeruginosa strain PA1280 plasmid pICP-4GES, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccacctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

221. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN366358 (Bacterium plasmid pALTS29, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
tgcggcggccgcctcggtggccttccgctgct	Protospacer
. ******** ** ************    **

222. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_005088 (Delftia acidovorans B plasmid pUO1, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

223. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_008385 (Burkholderia ambifaria AMMD plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggccgcctcggtggccttccgctgct	Protospacer
  ******** ** ************    **

224. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015090 (Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence) position: , mismatch: 8, identity: 0.75

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
tgcggcggcctcctcggtggcgttcacatccg	Protospacer
. *********** ******* *** *. **

225. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039425 (Citricoccus sp. SGAir0253 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

----cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcctccag----ctccacggtggccttctcggtct	Protospacer
    .**.*    ****************.***.**

226. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039430 (Citricoccus sp. SGAir0453 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

----cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcctccag----ctccacggtggccttctcggtct	Protospacer
    .**.*    ****************.***.**

227. spacer 4.4|1282569|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017753 (Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcgcctggctgcacatgccg-----gacccccactg	CRISPR spacer
cgcgcctgcccgcacatgccggagcagacgcc-----	Protospacer
******** *.**********     *** **

228. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026279 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-b08d, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

229. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050068 (Klebsiella aerogenes strain 035 plasmid p35, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

230. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026274 (Klebsiella oxytoca strain KONIH4 plasmid pKPC-4b66, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

231. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027617 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

232. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029112 (Escherichia coli strain AR436 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

233. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026205 (Escherichia coli strain ECONIH5 plasmid pKPC-e3ee, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

234. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026172 (Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

235. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026184 (Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-af73, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

236. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026398 (Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

237. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008843 (Klebsiella michiganensis strain M1 plasmid pKOXM1B, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

238. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017452 (Klebsiella sp. LTGPAF-6F plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

239. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042547 (Klebsiella michiganensis strain C52 plasmid pC52_002, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

240. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011646 (Klebsiella pneumoniae strain CAV1596 plasmid pKPC_CAV1596-97, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

241. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027125 (Escherichia coli strain AR_0374 plasmid unnamed3) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

242. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010382 (Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-53.129kb, complete sequence) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
gtgatgcggttccacgacagcggcggcagggt	Protospacer
* * ********.**************.

243. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH153808 (Gordonia phage Petra, complete genome) position: , mismatch: 8, identity: 0.75

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
caccgggggttcgacgacagcggccgcgccag	Protospacer
 * * * ***** *********** ***** .

244. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034781 (Pseudomonas sp. MPC6 plasmid pMPC6-47K, complete sequence) position: , mismatch: 8, identity: 0.75

accgagttggcccaggagccggagccggagcc	CRISPR spacer
cttgggcttgcaccggagccggagccggagcc	Protospacer
 ..*.*.* ** * ******************

245. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 8, identity: 0.75

---accgagttggcccaggagccggagccggagcc	CRISPR spacer
cgcacca---tggcccaggagcccgagccgcagat	Protospacer
   ***.   ************* ****** ** .

246. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 8, identity: 0.75

accgagttggcccaggagccggagccggagcc	CRISPR spacer
accgagtttgcccaggatccggatcgcgctac	Protospacer
******** ******** ***** *  *   *

247. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

accgagttggcccaggagccggagccggagcc	CRISPR spacer
aaccagttggcgcaggagccggagtcgctggt	Protospacer
* * ******* ************.**  * .

248. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH153808 (Gordonia phage Petra, complete genome) position: , mismatch: 8, identity: 0.75

accgagttggcccaggagccggagccggagcc	CRISPR spacer
gacgaaccggcccgtgagccggagccggagcg	Protospacer
. ***...*****. ****************

249. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016080 (Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
gagatcgtccagcgtcacggcaagccggtcgc	Protospacer
**.. ***********.********.***  .

250. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

251. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

252. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

253. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgccttcgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

254. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgccttcgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

255. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

256. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

257. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

258. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH617108 (Microviridae sp. isolate ctci907, complete genome) position: , mismatch: 8, identity: 0.75

gaaggcgtccagcgtcgcggcaagctggtgct----	CRISPR spacer
gtagggctccagcgtcgcggcaagc----gccacga	Protospacer
* ***  ******************    **.

259. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034781 (Pseudomonas sp. MPC6 plasmid pMPC6-47K, complete sequence) position: , mismatch: 8, identity: 0.75

accgagttggcccaggagccggagccggagcc	CRISPR spacer
cttgggcttgcaccggagccggagccggagcc	Protospacer
 ..*.*.* ** * ******************

260. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 8, identity: 0.75

---accgagttggcccaggagccggagccggagcc	CRISPR spacer
cgcacca---tggcccaggagcccgagccgcagat	Protospacer
   ***.   ************* ****** ** .

261. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 8, identity: 0.75

accgagttggcccaggagccggagccggagcc	CRISPR spacer
accgagtttgcccaggatccggatcgcgctac	Protospacer
******** ******** ***** *  *   *

262. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

accgagttggcccaggagccggagccggagcc	CRISPR spacer
aaccagttggcgcaggagccggagtcgctggt	Protospacer
* * ******* ************.**  * .

263. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH153808 (Gordonia phage Petra, complete genome) position: , mismatch: 8, identity: 0.75

accgagttggcccaggagccggagccggagcc	CRISPR spacer
gacgaaccggcccgtgagccggagccggagcg	Protospacer
. ***...*****. ****************

264. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016080 (Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
gagatcgtccagcgtcacggcaagccggtcgc	Protospacer
**.. ***********.********.***  .

265. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

266. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

267. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

268. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgccttcgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

269. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgccttcgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

270. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

271. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

272. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaaggcgtc-----cagcgtcgcggcaagctggtgct	CRISPR spacer
-----cgcctttgtcagcgtcgcggcacgctgctgct	Protospacer
     **.*     ************* **** ****

273. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH617108 (Microviridae sp. isolate ctci907, complete genome) position: , mismatch: 8, identity: 0.75

gaaggcgtccagcgtcgcggcaagctggtgct----	CRISPR spacer
gtagggctccagcgtcgcggcaagc----gccacga	Protospacer
* ***  ******************    **.

274. spacer 5.3|1295047|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 8, identity: 0.75

gtgctgttcaacctgcgcggctcggcgtcgcc	CRISPR spacer
attccggaaaacttgggcggctcggcgtcgcc	Protospacer
.* *.*   ***.** ****************

275. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 8, identity: 0.75

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
ctgctgccgatcctgccggcgcttgccaatgt	Protospacer
*****************  **** *. .*.*.

276. spacer 5.5|1295169|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH019215 (Streptomyces phage Yara, complete genome) position: , mismatch: 8, identity: 0.75

ctgctgccgatcctgcccccgctggtggacgc	CRISPR spacer
gagatgccgagcctgcccccggtggtgaaggg	Protospacer
  * ****** ********** *****.* *

277. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
cgggtgcagccggcgcccgcggcgctgcgca	Protospacer
. *  *************.* ********

278. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
ggcgaggggccggtgccgaccgcgctgcggc	Protospacer
    ** .*****.*** *************

279. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
gacgatccgccggcgctcgccgcgctgcggc	Protospacer
    * * ********.*.************

280. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
ccaaagctgtcggcgcccaccgcgctgatgt	Protospacer
.*. *** *.*****************  *.

281. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to MG711466 (Faecalibacterium phage FP_Toutatis, complete genome) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
ctgcagcagccagcgcccgccgcgcaccacc	Protospacer
..*********.******.******  *. *

282. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
caccctcagccggcgcgcaacgcgctgcgcc	Protospacer
.  *  ********** ** ********* *

283. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
caccctcagccggcgcgcaacgcgctgcgcc	Protospacer
.  *  ********** ** ********* *

284. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
caccctcagccggcgcgcaacgcgctgcgcc	Protospacer
.  *  ********** ** ********* *

285. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP019314 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence) position: , mismatch: 8, identity: 0.75

tcatgatgccgaaccggctgctg---agcacgagg	CRISPR spacer
ccatgatggcgaacgggctgctgacaagcgca---	Protospacer
.******* ***** ********   ***.*.

286. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 8, identity: 0.742

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gacaccgtgaccggtgagacggtggccagga	Protospacer
***** ******** ********  * . *

287. spacer 7.3|2822108|31|NZ_CP048875|CRISPRCasFinder,CRT matches to MK929790 (Caulobacter phage RW, complete genome) position: , mismatch: 8, identity: 0.742

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gacaccgtgaccggcgagacggtgttgtcgt	Protospacer
***** ******** ******** ..* .*.

288. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP033508 (Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743a, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgcattcgacccgcacaaggcccgcatcg	Protospacer
  *  . ********** ************

289. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP033369 (Mesorhizobium loti strain SU343 plasmid pMLSU343a, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgcattcgacccgcacaaggcccgcatcg	Protospacer
  *  . ********** ************

290. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP016080 (Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgcattcgacccgcacaaggcccgcatcg	Protospacer
  *  . ********** ************

291. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP048426 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
atctggatcgacccgcagaaagccgccgagc	Protospacer
 .******************.***  *.  *

292. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgccatccaccggcagaaggcccgcatcg	Protospacer
  *   *** *** ****************

293. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

294. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP050081 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

295. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP022542 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ctcttgctcgacccgcagaaggcccatcgcc	Protospacer
..** * ******************..  **

296. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

297. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

298. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NC_002682 (Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence) position: , mismatch: 8, identity: 0.742

tcctgga----tcgacccgcagaaggcccgcatcc	CRISPR spacer
----ggggctttcgacccacacaaggcccgcatcg	Protospacer
    **.    *******.** ************

299. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

300. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

301. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

302. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

303. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

304. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

305. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

306. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

307. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

308. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
cgggtgcagccggcgcccgcggcgctgcgca	Protospacer
. *  *************.* ********

309. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
ggcgaggggccggtgccgaccgcgctgcggc	Protospacer
    ** .*****.*** *************

310. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
gacgatccgccggcgctcgccgcgctgcggc	Protospacer
    * * ********.*.************

311. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
ccaaagctgtcggcgcccaccgcgctgatgt	Protospacer
.*. *** *.*****************  *.

312. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to MG711466 (Faecalibacterium phage FP_Toutatis, complete genome) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
ctgcagcagccagcgcccgccgcgcaccacc	Protospacer
..*********.******.******  *. *

313. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
caccctcagccggcgcgcaacgcgctgcgcc	Protospacer
.  *  ********** ** ********* *

314. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
caccctcagccggcgcgcaacgcgctgcgcc	Protospacer
.  *  ********** ** ********* *

315. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
caccctcagccggcgcgcaacgcgctgcgcc	Protospacer
.  *  ********** ** ********* *

316. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to NZ_CP019314 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence) position: , mismatch: 8, identity: 0.75

tcatgatgccgaaccggctgctg---agcacgagg	CRISPR spacer
ccatgatggcgaacgggctgctgacaagcgca---	Protospacer
.******* ***** ********   ***.*.

317. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 8, identity: 0.742

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gacaccgtgaccggtgagacggtggccagga	Protospacer
***** ******** ********  * . *

318. spacer 7.7|2822109|31|NZ_CP048875|PILER-CR matches to MK929790 (Caulobacter phage RW, complete genome) position: , mismatch: 8, identity: 0.742

gacacggtgaccggggagacggtcccggtgc	CRISPR spacer
gacaccgtgaccggcgagacggtgttgtcgt	Protospacer
***** ******** ******** ..* .*.

319. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP033508 (Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743a, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgcattcgacccgcacaaggcccgcatcg	Protospacer
  *  . ********** ************

320. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP033369 (Mesorhizobium loti strain SU343 plasmid pMLSU343a, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgcattcgacccgcacaaggcccgcatcg	Protospacer
  *  . ********** ************

321. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP016080 (Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgcattcgacccgcacaaggcccgcatcg	Protospacer
  *  . ********** ************

322. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP048426 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
atctggatcgacccgcagaaagccgccgagc	Protospacer
 .******************.***  *.  *

323. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgccatccaccggcagaaggcccgcatcg	Protospacer
  *   *** *** ****************

324. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

325. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP050081 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

326. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP022542 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-2, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ctcttgctcgacccgcagaaggcccatcgcc	Protospacer
..** * ******************..  **

327. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

328. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

329. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NC_002682 (Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence) position: , mismatch: 8, identity: 0.742

tcctgga----tcgacccgcagaaggcccgcatcc	CRISPR spacer
----ggggctttcgacccacacaaggcccgcatcg	Protospacer
    **.    *******.** ************

330. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

331. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

332. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

333. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

334. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

335. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

336. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

337. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

338. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 8, identity: 0.742

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggcgtggtcgacccgcagatggccggcatcg	Protospacer
  *  *.************ **** *****

339. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
tgcttttcttcctcggcaagggctaccgtgt	Protospacer
*  .. .**.************* *******

340. spacer 8.2|2831836|31|NZ_CP048875|CRISPRCasFinder matches to NZ_AP014708 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_4p, complete sequence) position: , mismatch: 8, identity: 0.742

tcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
tcgccgcctccctcggcgcgggcggcgtcgc	Protospacer
*****************. ****..*  .*.

341. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atgcttttcttcctcggcaagggctaccgtgt	Protospacer
**  .. .**.************* *******

342. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 8, identity: 0.75

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgccgcatcgctcggcaagggttttggtgc	Protospacer
******** ** ***********.  . ***.

343. spacer 16.11|6526242|36|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.778

gacatcccgctaccgtgaggccgcctcgcccgaggt-	CRISPR spacer
gacatcccgcttccgtgaggccgcct-gctgggcaca	Protospacer
*********** ************** **. *. ..

344. spacer 17.9|6535561|35|NZ_CP048875|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.771

cgccgcgctcacggcggccggggtgttcggcgtgc-	CRISPR spacer
cgccgcgctcgcggcggccgcggtgct-gaaatccg	Protospacer
**********.********* ****.* *. .* *

345. spacer 17.10|6535625|37|NZ_CP048875|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.784

agcacacgcgcagcttcgcggagaactacgccaacga	CRISPR spacer
agcgtttccgcagcttcgcggagaactccgccgacgt	Protospacer
***.. . ******************* ****.***

346. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ggtctgcttctgctgctgtttcagcagattgat	CRISPR spacer
cccctgcttcagctgctttttcagcagttctct	Protospacer
  .******* ****** ********* *.  *

347. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
gatggcggcctcgacggtgtccttcccaccgg	Protospacer
  .********* ****** *******. *

348. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
gatggcggcctcgacggtgtccttcccaccgg	Protospacer
  .********* ****** *******. *

349. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 9, identity: 0.719

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
gcggatcgccgccacggcggccttcccggcgg	Protospacer
 * *.. *** ******.************

350. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018077 (Sulfitobacter sp. AM1-D1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
cacggcggcctccacggtcgtcttcatagatg	Protospacer
* **************** *.**** ..* .

351. spacer 4.3|1282508|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MH834622 (Arthrobacter phage Noely, complete genome) position: , mismatch: 9, identity: 0.719

cccggcggcctccacggtggccttcccggcct	CRISPR spacer
ggcggcggcctccagggtgcccttcagcagct	Protospacer
  ************ **** *****   . **

352. spacer 4.10|1282936|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 9, identity: 0.719

cgggcgtgctcgattacggcgtgcgcgcgttt	CRISPR spacer
tcgacgtgctcgatctcggcgtgcgcgacggt	Protospacer
. *.**********. ***********    *

353. spacer 4.10|1282936|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 9, identity: 0.719

cgggcgtgctcgattacggcgtgcgcgcgttt	CRISPR spacer
tcgacgtgctcgatctcggcgtgcgcgacggt	Protospacer
. *.**********. ***********    *

354. spacer 4.11|1282997|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MT498036 (Gordonia Phage Zitch, complete genome) position: , mismatch: 9, identity: 0.719

gacgtgtacgtatgcgatgcgtgcccggggca	CRISPR spacer
tagctcaacgtatgcgaggcgtgctcgggggc	Protospacer
 *  *  ********** ******.*****

355. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to CP054928 (Streptomyces fulvissimus strain NA06532 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

accgagttggcccaggagccggagccggagcc	CRISPR spacer
gggccgttggccctggaggcggagccggaggg	Protospacer
.    ******** **** ***********

356. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026695 (Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP3, complete sequence) position: , mismatch: 9, identity: 0.719

accgagttggcccaggagccggagccggagcc	CRISPR spacer
gcaagcgaagcccaggagccagagccggagcc	Protospacer
.* ..   .***********.***********

357. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

accgagttggcccaggagccggagccggagcc	CRISPR spacer
ccggcccccgcaccggagccggagccggagcc	Protospacer
 * *  .. ** * ******************

358. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MT723942 (Gordonia phage Archis, complete genome) position: , mismatch: 9, identity: 0.719

accgagttggcccaggagccggagccggagcc	CRISPR spacer
tggaaggccgctccggagccggagccggagcc	Protospacer
   .** . **.* ******************

359. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045319 (Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence) position: , mismatch: 9, identity: 0.719

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
catctcgtccagcgtcacggcatgctggtttg	Protospacer
 *   ***********.***** ****** .

360. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032676 (Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence) position: , mismatch: 9, identity: 0.719

-----gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
ccgttga-----tccggcgccgcggcaagctggtgga	Protospacer
     **     ***.***.***************

361. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
ctcagcaaacagcctctcggcaagctggtgct	Protospacer
   .**.  **** ** ***************

362. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
ctcagcaaacagcctctcggcaagctggtgct	Protospacer
   .**.  **** ** ***************

363. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.719

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
gtccaggtccagcgtcccggcaagccggtcgt	Protospacer
*   . ********** ********.***  *

364. spacer 4.14|1283180|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_028659 (Klebsiella phage vB_KpnM_KB57, complete genome) position: , mismatch: 9, identity: 0.719

cccacaaaagcacggttgttgtagccagtccg	CRISPR spacer
cccacaaaagcacggttgctggagtggcaaca	Protospacer
******************.** **. .   *.

365. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to CP054928 (Streptomyces fulvissimus strain NA06532 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

accgagttggcccaggagccggagccggagcc	CRISPR spacer
gggccgttggccctggaggcggagccggaggg	Protospacer
.    ******** **** ***********

366. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026695 (Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP3, complete sequence) position: , mismatch: 9, identity: 0.719

accgagttggcccaggagccggagccggagcc	CRISPR spacer
gcaagcgaagcccaggagccagagccggagcc	Protospacer
.* ..   .***********.***********

367. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

accgagttggcccaggagccggagccggagcc	CRISPR spacer
ccggcccccgcaccggagccggagccggagcc	Protospacer
 * *  .. ** * ******************

368. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MT723942 (Gordonia phage Archis, complete genome) position: , mismatch: 9, identity: 0.719

accgagttggcccaggagccggagccggagcc	CRISPR spacer
tggaaggccgctccggagccggagccggagcc	Protospacer
   .** . **.* ******************

369. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045319 (Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence) position: , mismatch: 9, identity: 0.719

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
catctcgtccagcgtcacggcatgctggtttg	Protospacer
 *   ***********.***** ****** .

370. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032676 (Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence) position: , mismatch: 9, identity: 0.719

-----gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
ccgttga-----tccggcgccgcggcaagctggtgga	Protospacer
     **     ***.***.***************

371. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
ctcagcaaacagcctctcggcaagctggtgct	Protospacer
   .**.  **** ** ***************

372. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
ctcagcaaacagcctctcggcaagctggtgct	Protospacer
   .**.  **** ** ***************

373. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.719

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
gtccaggtccagcgtcccggcaagccggtcgt	Protospacer
*   . ********** ********.***  *

374. spacer 4.17|1283363|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_028659 (Klebsiella phage vB_KpnM_KB57, complete genome) position: , mismatch: 9, identity: 0.719

cccacaaaagcacggttgttgtagccagtccg	CRISPR spacer
cccacaaaagcacggttgctggagtggcaaca	Protospacer
******************.** **. .   *.

375. spacer 4.19|1283485|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021816 (Sinorhizobium meliloti strain M270 plasmid accessoryB, complete sequence) position: , mismatch: 9, identity: 0.719

agtatcggggccagacaaacagcggagggggc	CRISPR spacer
cgacacggtgccagacaaactgcggaggaagt	Protospacer
 *   *** *********** *******..*.

376. spacer 5.1|1294925|32|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.719

aacggatctcctgggccggtgtggtcacggcc	CRISPR spacer
ggctcatctccggggccggggtggtcacgtat	Protospacer
..*  ****** ******* *********  .

377. spacer 5.3|1295047|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020813 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

gtgctgttcaacctgcgcggctcggcgtcgcc	CRISPR spacer
ctgggcctcaacctgctcggctcggcgacgat	Protospacer
 **   .********* ********** ** .

378. spacer 5.3|1295047|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.719

gtgctgtt--caacctgcgcggctcggcgtcgcc	CRISPR spacer
--accggcgacatcctgcgcggctgggcgtcgcg	Protospacer
  .*.* .  ** *********** ********

379. spacer 5.9|1295413|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.719

atccattccgcgaacgcgggcgagaggcggcg	CRISPR spacer
ctgccagccgcgagcgcgggcgaaaggcggtt	Protospacer
 * *   ******.*********.******.

380. spacer 5.9|1295413|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_022044 (Paracoccus aminophilus JCM 7686 plasmid pAMI6, complete sequence) position: , mismatch: 9, identity: 0.719

atccattccgcgaacgcgggcgagaggcggcg	CRISPR spacer
gtgccgcgcgggaaggcgggcgagaggcggcc	Protospacer
.* *  . ** *** ****************

381. spacer 5.11|1295535|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 9, identity: 0.719

ccttctgtcagggaggtgatcgaggcctcgaa	CRISPR spacer
gcggcgatccgcgaggtgatcgaggcctcgcc	Protospacer
 *  * .** * ******************

382. spacer 7.1|2821985|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP026745 (Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
gagggaatgcgggcgcccaccgccctgcggc	Protospacer
  * ..  ** ************ *******

383. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
tcgcctcgcagaaccggctgctgaccacgatc	Protospacer
**..  .** ************** *****

384. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
tcgcctcgcagaaccggctgctgaccacgatc	Protospacer
**..  .** ************** *****

385. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
tcgcctcgcagaaccggctgctgaccacgatc	Protospacer
**..  .** ************** *****

386. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

387. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

388. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

389. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

390. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggagg	Protospacer
****** ********* ******* . .

391. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

392. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggagg	Protospacer
****** ********* ******* . .

393. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

394. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggtgtggtcgacccgcagatggccggcatcg	Protospacer
  .  *.************ **** *****

395. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggggtggtcgacccgcagatggccggcatcg	Protospacer
     *.************ **** *****

396. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggtgtggtcgacccgcagatggccggcatcg	Protospacer
  .  *.************ **** *****

397. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
acctggatcgacctgcagaacgccggacagg	Protospacer
 ************.****** *** *

398. spacer 7.4|2822169|31|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggtgtggtcgacccgcagatggccggcatcg	Protospacer
  .  *.************ **** *****

399. spacer 7.5|2821986|31|NZ_CP048875|PILER-CR matches to NZ_CP026745 (Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

tcgcagcagccggcgcccaccgcgctgcggc	CRISPR spacer
gagggaatgcgggcgcccaccgccctgcggc	Protospacer
  * ..  ** ************ *******

400. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
tcgcctcgcagaaccggctgctgaccacgatc	Protospacer
**..  .** ************** *****

401. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
tcgcctcgcagaaccggctgctgaccacgatc	Protospacer
**..  .** ************** *****

402. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
tcgcctcgcagaaccggctgctgaccacgatc	Protospacer
**..  .** ************** *****

403. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

404. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

405. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

406. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

407. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggagg	Protospacer
****** ********* ******* . .

408. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

409. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggagg	Protospacer
****** ********* ******* . .

410. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
tcctggttcgacccgccgaaggccaaggaag	Protospacer
****** ********* ******* . .

411. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggtgtggtcgacccgcagatggccggcatcg	Protospacer
  .  *.************ **** *****

412. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggggtggtcgacccgcagatggccggcatcg	Protospacer
     *.************ **** *****

413. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggtgtggtcgacccgcagatggccggcatcg	Protospacer
  .  *.************ **** *****

414. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
acctggatcgacctgcagaacgccggacagg	Protospacer
 ************.****** *** *

415. spacer 7.8|2822170|31|NZ_CP048875|PILER-CR matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 9, identity: 0.71

tcctggatcgacccgcagaaggcccgcatcc	CRISPR spacer
ggtgtggtcgacccgcagatggccggcatcg	Protospacer
  .  *.************ **** *****

416. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgcagcctcgctcggcaagggttttggcgc	Protospacer
***** ***** ***********.  . *.*.

417. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_AP014708 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_4p, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
ttcgccgcctccctcggcgcgggcggcgtcgc	Protospacer
 *****************. ****..*  .*.

418. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to NZ_CP021128 (Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgcagcctcgctcggcaagggttttggcgc	Protospacer
***** ***** ***********.  . *.*.

419. spacer 8.5|2831835|32|NZ_CP048875|CRT matches to CP007645 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgcctccctcggcaagggcaaccgtgt	CRISPR spacer
atcgcagcctcgctcggcaagggttttggcgc	Protospacer
***** ***** ***********.  . *.*.

420. spacer 9.1|2949747|34|NZ_CP048875|CRISPRCasFinder matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 9, identity: 0.735

gtcgtagccgccctgctggggtggctgcgcggag	CRISPR spacer
accgtagccgccctgctgggcgggctgctgcgcc	Protospacer
..******************  ******   *

421. spacer 9.1|2949747|34|NZ_CP048875|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.735

gtcgtagccgccctgctggggtggctgcgcggag	CRISPR spacer
gtgatcgccgccctgctgtggtggcggcgcaccc	Protospacer
** .* ************ ****** ****.

422. spacer 15.2|4805303|38|NZ_CP048875|CRISPRCasFinder matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 9, identity: 0.763

cggcgacgaccttgccggcctcgttcaggacg-tatgtg	CRISPR spacer
ggtagacgaccttgccggcatcggtcaggacgacacct-	Protospacer
 *  *************** *** ******** .*. *

423. spacer 16.3|6525723|36|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029211 (Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence) position: , mismatch: 9, identity: 0.75

gctcgccgccgccttccgcgtcgagccgacatggat	CRISPR spacer
catcgccgccgccttccgcttcgagctgagcaaggt	Protospacer
  ***************** ******.**   .*.*

424. spacer 16.11|6526242|36|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.75

gacatcccgctaccgtgaggccgcctcgcccgaggt-	CRISPR spacer
gacatcccgcttccgtgaggcagcct-gctgggcaca	Protospacer
*********** ********* **** **. *. ..

425. spacer 16.11|6526242|36|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 9, identity: 0.75

gacatcccgctaccgtgaggccgcctcgcccgaggt-	CRISPR spacer
gacatcccgcttccgtgaggcagcct-gctgggcaca	Protospacer
*********** ********* **** **. *. ..

426. spacer 16.11|6526242|36|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 9, identity: 0.75

gacatcccgctaccgtgaggccgcctcgcccgaggt-	CRISPR spacer
gacatcccgcttccgtgaggcagcct-gctgggcaca	Protospacer
*********** ********* **** **. *. ..

427. spacer 17.3|6535168|36|NZ_CP048875|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033429 (Burkholderia gladioli strain Burkholderia gladioli Co14 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.75

gctgggcgtggcggcggccctacatcggctacgtgc	CRISPR spacer
tctatgtctggtggcggccctacatcagctacgtcg	Protospacer
 **. *. ***.**************.*******

428. spacer 4.5|1282630|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to MN512538 (Vibrio phage Seahorse, complete genome) position: , mismatch: 10, identity: 0.688

gagctgcggttctacgacagcggcggcgccca	CRISPR spacer
aactggcggttctatgacatcggcggcggagc	Protospacer
.* . *********.**** ********

429. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 10, identity: 0.688

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
gtctcgatcctgcggcgcggcaagctggtggg	Protospacer
*     .*** *** ***************

430. spacer 4.13|1283119|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_009508 (Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence) position: , mismatch: 10, identity: 0.688

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
ctcctcctcgagcgtcgcggcaagccggtgtg	Protospacer
     * ** ***************.****.

431. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 10, identity: 0.688

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
gtctcgatcctgcggcgcggcaagctggtggg	Protospacer
*     .*** *** ***************

432. spacer 4.16|1283302|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NC_009508 (Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence) position: , mismatch: 10, identity: 0.688

gaaggcgtccagcgtcgcggcaagctggtgct	CRISPR spacer
ctcctcctcgagcgtcgcggcaagccggtgtg	Protospacer
     * ** ***************.****.

433. spacer 5.9|1295413|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

atccattccgcgaacgcgggcgagaggcggcg	CRISPR spacer
gcggccggcgcgagcgcgggcgagcggcggcg	Protospacer
..   .  *****.********** *******

434. spacer 5.11|1295535|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021368 (Acidovorax carolinensis strain P4 plasmid pACP4.2, complete sequence) position: , mismatch: 10, identity: 0.688

ccttctgtcagggaggtgatcgaggcctcgaa	CRISPR spacer
ttgccctgcagcgtggtgatcgaggcctcgat	Protospacer
.. .*.  *** * *****************

435. spacer 5.11|1295535|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021364 (Acidovorax carolinensis strain P3 plasmid pACP3.2, complete sequence) position: , mismatch: 10, identity: 0.688

ccttctgtcagggaggtgatcgaggcctcgaa	CRISPR spacer
ttgccctgcagcgtggtgatcgaggcctcgat	Protospacer
.. .*.  *** * *****************

436. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
tggcctcgcagaaccggctgctgaccacgatc	Protospacer
* ..  .** ************** *****

437. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
tggcctcgcagaaccggctgctgaccacgatc	Protospacer
* ..  .** ************** *****

438. spacer 9.1|2949747|34|NZ_CP048875|CRISPRCasFinder matches to MT310894 (Microbacterium phage Tempo, complete genome) position: , mismatch: 10, identity: 0.706

gtcgtagccgccctgctggggtggctgcgcggag	CRISPR spacer
cgggtagccgccctgctgcgggggctgctgctgg	Protospacer
   *************** ** ******    .*

439. spacer 17.9|6535561|35|NZ_CP048875|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 10, identity: 0.714

cgccgcgctcacggcggccggggtgttcggcgtgc	CRISPR spacer
ttcccggctcatggcggccggggtggtcggcaata	Protospacer
. **  *****.************* *****.

440. spacer 4.1|1282385|33|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP026738 (Bacillus megaterium strain YC4-R4 plasmid unnamed2) position: , mismatch: 11, identity: 0.667

ggtctgcttctgctgctgtttcagcagattgat	CRISPR spacer
tatctgcttctgcttttgtttcagcatcccctg	Protospacer
 .************ .**********  ..

441. spacer 4.6|1282691|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017296 (Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence) position: , mismatch: 11, identity: 0.656

tgccccgggagccctccatctctggcagggtg	CRISPR spacer
caaatcgggtgcgctccatctctggcagttat	Protospacer
..  .**** ** ***************

442. spacer 4.12|1283058|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033873 (Caulobacter sp. FWC26 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.656

accgagttggcccaggagccggagccggagcc	CRISPR spacer
gatgagttggcccaggcgccggcgccatgatg	Protospacer
. .************* ***** ***. ...

443. spacer 4.15|1283241|32|NZ_CP048875|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033873 (Caulobacter sp. FWC26 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.656

accgagttggcccaggagccggagccggagcc	CRISPR spacer
gatgagttggcccaggcgccggcgccatgatg	Protospacer
. .************* ***** ***. ...

444. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP020948 (Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence) position: , mismatch: 11, identity: 0.656

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
cggctttgccgaaccggatgctgcgcacgccc	Protospacer
. ..  *********** ***** *****

445. spacer 7.2|2822046|32|NZ_CP048875|CRISPRCasFinder,CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 11, identity: 0.656

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
cggctttgccgaaccggctgctgcgcgcgccc	Protospacer
. ..  ***************** **.**

446. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to NZ_CP020948 (Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence) position: , mismatch: 11, identity: 0.656

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
cggctttgccgaaccggatgctgcgcacgccc	Protospacer
. ..  *********** ***** *****

447. spacer 7.6|2822047|32|NZ_CP048875|PILER-CR matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 11, identity: 0.656

tcatgatgccgaaccggctgctgagcacgagg	CRISPR spacer
cggctttgccgaaccggctgctgcgcgcgccc	Protospacer
. ..  ***************** **.**

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048875

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection