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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP035643 Staphylococcus epidermidis strain E73 chromosome, complete genome 1 crisprs csa3,cas3,DEDDh,DinG,WYL 0 0 187 0

Results visualization

1. NZ_CP035643
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP035643_1 2049194-2049277 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 15467 10 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_2 21889 : 31409 5 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_3 41616 : 47777 8 Gordonia_phage(33.33%) NA NA
DBSCAN-SWA_4 54186 : 54945 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_5 68685 : 77421 10 Pandoravirus(40.0%) NA NA
DBSCAN-SWA_6 82582 : 84106 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_7 93337 : 99471 7 Staphylococcus_phage(50.0%) integrase attL 85209:85224|attR 99774:99789
DBSCAN-SWA_8 105062 : 105326 1 Staphylococcus_virus(100.0%) NA NA
DBSCAN-SWA_9 115733 : 122125 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_10 138496 : 140203 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_11 149290 : 156749 9 Streptococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_12 163012 : 165477 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_13 176110 : 185192 8 uncultured_virus(20.0%) tRNA NA
DBSCAN-SWA_14 191883 : 196401 4 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_15 200103 : 202557 1 Escherichia_phage(100.0%) protease NA
DBSCAN-SWA_16 208394 : 213183 8 Catovirus(50.0%) tRNA NA
DBSCAN-SWA_17 217041 : 228182 6 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_18 232214 : 233165 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_19 243547 : 244210 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_20 252485 : 254506 3 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_21 263082 : 268528 6 Burkholderia_virus(33.33%) NA NA
DBSCAN-SWA_22 280167 : 281499 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_23 288260 : 291250 3 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_24 296278 : 299571 3 Tupanvirus(50.0%) transposase NA
DBSCAN-SWA_25 325910 : 326657 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_26 333893 : 344484 8 Streptomyces_phage(20.0%) NA NA
DBSCAN-SWA_27 348454 : 349216 1 Cedratvirus(100.0%) NA NA
DBSCAN-SWA_28 359201 : 359678 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_29 368710 : 369277 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_30 372446 : 377237 3 Organic_Lake_phycodnavirus(33.33%) transposase NA
DBSCAN-SWA_31 392757 : 400000 7 Burkholderia_phage(25.0%) transposase NA
DBSCAN-SWA_32 417807 : 428343 13 Staphylococcus_phage(22.22%) NA NA
DBSCAN-SWA_33 431501 : 445114 9 Streptococcus_phage(28.57%) transposase NA
DBSCAN-SWA_34 449766 : 460201 10 uncultured_Caudovirales_phage(66.67%) NA NA
DBSCAN-SWA_35 471634 : 474693 3 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_36 480841 : 481642 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_37 485380 : 488215 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_38 492350 : 497347 5 Streptococcus_phage(40.0%) NA NA
DBSCAN-SWA_39 506989 : 516820 11 Staphylococcus_phage(40.0%) NA NA
DBSCAN-SWA_40 522235 : 526741 6 Indivirus(33.33%) NA NA
DBSCAN-SWA_41 531547 : 537560 10 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_42 541122 : 544595 3 Brazilian_cedratvirus(50.0%) NA NA
DBSCAN-SWA_43 550834 : 551683 1 Golden_Marseillevirus(100.0%) NA NA
DBSCAN-SWA_44 558744 : 561413 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_45 565675 : 569315 3 Lake_Baikal_phage(50.0%) NA NA
DBSCAN-SWA_46 579135 : 579729 1 Aureococcus_anophage(100.0%) NA NA
DBSCAN-SWA_47 582901 : 648450 58 Streptococcus_phage(31.58%) tRNA,transposase NA
DBSCAN-SWA_48 657419 : 662065 3 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_49 672346 : 672562 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_50 683227 : 687235 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_51 691034 : 692237 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_52 698711 : 713343 14 Synechococcus_phage(22.22%) NA NA
DBSCAN-SWA_53 718525 : 719698 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_54 729548 : 730100 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_55 734609 : 738380 4 Erysipelothrix_phage(50.0%) NA NA
DBSCAN-SWA_56 747266 : 750581 2 Erysipelothrix_phage(50.0%) transposase NA
DBSCAN-SWA_57 763398 : 766288 6 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_58 772884 : 773943 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_59 778444 : 783085 3 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_60 789689 : 790277 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_61 810872 : 813623 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_62 818219 : 822830 4 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_63 826723 : 827335 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_64 830544 : 837470 7 Abalone_herpesvirus(25.0%) tRNA NA
DBSCAN-SWA_65 840617 : 842618 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_66 852639 : 854622 3 Trichoplusia_ni_ascovirus(33.33%) NA NA
DBSCAN-SWA_67 870249 : 871020 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_68 875083 : 881618 5 Indivirus(33.33%) protease,tRNA NA
DBSCAN-SWA_69 886247 : 887018 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_70 891295 : 902977 9 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_71 908026 : 913610 4 Mycobacterium_phage(33.33%) NA NA
DBSCAN-SWA_72 918080 : 919130 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_73 925502 : 926120 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_74 929436 : 934010 2 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_75 941833 : 942310 1 Fowlpox_virus(100.0%) NA NA
DBSCAN-SWA_76 948003 : 951229 5 Staphylococcus_phage(50.0%) capsid NA
DBSCAN-SWA_77 954542 : 958897 6 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_78 969846 : 975180 6 Tupanvirus(25.0%) NA NA
DBSCAN-SWA_79 979414 : 980539 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_80 984251 : 985892 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_81 991016 : 995410 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_82 1004964 : 1006227 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_83 1009448 : 1011013 2 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_84 1020996 : 1028477 8 Tupanvirus(25.0%) NA NA
DBSCAN-SWA_85 1033306 : 1034914 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_86 1042524 : 1047477 6 Yellowstone_lake_phycodnavirus(33.33%) lysis NA
DBSCAN-SWA_87 1050984 : 1051776 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_88 1061029 : 1077321 20 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_89 1083924 : 1086986 3 Staphylococcus_phage(66.67%) transposase NA
DBSCAN-SWA_90 1120506 : 1122387 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_91 1125790 : 1132876 5 Temperate_phage(25.0%) tRNA NA
DBSCAN-SWA_92 1141747 : 1145336 5 Anguillid_herpesvirus(33.33%) NA NA
DBSCAN-SWA_93 1154277 : 1166796 14 Bacillus_phage(42.86%) NA NA
DBSCAN-SWA_94 1170146 : 1171631 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_95 1174800 : 1176207 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_96 1182741 : 1193365 11 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_97 1201367 : 1204215 2 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_98 1209748 : 1210372 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_99 1216807 : 1230857 13 Bacillus_thuringiensis_phage(14.29%) tRNA NA
DBSCAN-SWA_100 1233902 : 1234850 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_101 1241744 : 1244840 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_102 1247876 : 1255393 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_103 1268144 : 1305077 31 uncultured_Mediterranean_phage(23.53%) tRNA,transposase NA
DBSCAN-SWA_104 1313116 : 1313848 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_105 1317179 : 1323735 5 Clostridium_phage(50.0%) integrase,tRNA attL 1310906:1310921|attR 1322279:1322294
DBSCAN-SWA_106 1333175 : 1344668 10 Bacillus_virus(20.0%) protease,tRNA NA
DBSCAN-SWA_107 1349524 : 1357329 5 Bacillus_virus(20.0%) NA NA
DBSCAN-SWA_108 1360579 : 1362337 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_109 1366939 : 1370137 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_110 1387762 : 1391902 4 Only_Syngen_Nebraska_virus(50.0%) NA NA
DBSCAN-SWA_111 1395786 : 1398481 2 uncultured_Mediterranean_phage(50.0%) protease,tRNA NA
DBSCAN-SWA_112 1407938 : 1412942 3 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_113 1422519 : 1473225 40 Staphylococcus_phage(82.35%) integrase,tRNA,transposase attL 1415386:1415402|attR 1476034:1476050
DBSCAN-SWA_114 1482032 : 1482773 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_115 1491441 : 1494529 4 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_116 1502546 : 1507090 4 Planktothrix_phage(50.0%) protease NA
DBSCAN-SWA_117 1520485 : 1524156 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_118 1537410 : 1538040 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_119 1546326 : 1551378 5 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_120 1558271 : 1568761 9 Bacillus_virus(40.0%) NA NA
DBSCAN-SWA_121 1579598 : 1618735 44 uncultured_Caudovirales_phage(50.0%) protease,integrase,terminase,transposase attL 1598885:1598903|attR 1615860:1615878
DBSCAN-SWA_122 1624041 : 1629862 5 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_123 1633098 : 1638096 3 Bodo_saltans_virus(33.33%) tRNA NA
DBSCAN-SWA_124 1641814 : 1646469 4 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_125 1659950 : 1663311 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_126 1667903 : 1669433 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_127 1676503 : 1677157 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_128 1682482 : 1682878 1 Listeria_phage(100.0%) NA NA
DBSCAN-SWA_129 1693061 : 1700907 9 Catovirus(25.0%) NA NA
DBSCAN-SWA_130 1708490 : 1710098 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_131 1721912 : 1722359 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_132 1727737 : 1728691 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_133 1732623 : 1734429 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_134 1754592 : 1755558 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_135 1778377 : 1783758 7 Orpheovirus(33.33%) tRNA NA
DBSCAN-SWA_136 1798816 : 1800151 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_137 1806448 : 1809604 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_138 1815012 : 1816191 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_139 1823573 : 1824194 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_140 1848133 : 1851511 3 Catovirus(50.0%) NA NA
DBSCAN-SWA_141 1864224 : 1864860 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_142 1868567 : 1870281 2 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_143 1874505 : 1875387 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_144 1879942 : 1881115 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_145 1900452 : 1901664 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_146 1905209 : 1907736 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_147 1916926 : 1919092 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_148 1941032 : 1942586 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_149 1959484 : 1960497 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_150 1966783 : 1967935 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_151 1975874 : 1977392 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_152 1981691 : 1983467 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_153 1987979 : 1990778 2 Mycoplasma_phage(50.0%) NA NA
DBSCAN-SWA_154 1996897 : 1997560 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_155 2002818 : 2003637 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_156 2009221 : 2020312 8 Bacillus_phage(40.0%) transposase NA
DBSCAN-SWA_157 2052739 : 2053732 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_158 2056936 : 2057074 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_159 2071282 : 2078185 6 Acanthamoeba_polyphaga_mimivirus(33.33%) protease NA
DBSCAN-SWA_160 2086598 : 2087117 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_161 2092833 : 2096733 3 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_162 2100994 : 2104015 2 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_163 2111780 : 2111918 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_164 2117206 : 2118025 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_165 2126699 : 2128037 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_166 2133087 : 2133978 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_167 2137956 : 2158779 15 Vibrio_phage(25.0%) holin NA
DBSCAN-SWA_168 2165089 : 2165821 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_169 2173287 : 2174880 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_170 2178109 : 2178859 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_171 2187408 : 2198455 7 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_172 2222563 : 2224531 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_173 2228295 : 2228433 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_174 2254315 : 2255089 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_175 2269996 : 2270632 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_176 2286087 : 2293808 7 Vibrio_phage(25.0%) NA NA
DBSCAN-SWA_177 2305183 : 2312347 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_178 2316607 : 2317504 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_179 2333263 : 2335083 2 Bacillus_virus(50.0%) holin NA
DBSCAN-SWA_180 2342526 : 2348273 4 Tetraselmis_virus(33.33%) NA NA
DBSCAN-SWA_181 2355316 : 2361498 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_182 2380404 : 2384750 4 Emiliania_huxleyi_virus(50.0%) NA NA
DBSCAN-SWA_183 2392158 : 2393697 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_184 2400387 : 2401239 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_185 2419806 : 2421827 3 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_186 2431793 : 2434793 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_187 2443136 : 2448114 4 Streptococcus_phage(66.67%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage