CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP049043	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_6, complete sequence	0 crisprs	NA	0	0
NZ_CP049038	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_1, complete sequence	0 crisprs	csa3	0	1
NZ_CP049037	Pseudohalocynthiibacter aestuariivivens strain RR4-35 chromosome, complete genome	4 crisprs	cas9,cas1,cas2,RT,WYL,cas3,DEDDh,csa3	11	2
NZ_CP049040	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_3, complete sequence	0 crisprs	NA	0	8
NZ_CP049039	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_2, complete sequence	0 crisprs	NA	0	8
NZ_CP049041	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_4, complete sequence	0 crisprs	NA	0	0
NZ_CP049042	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_5, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 4323

Trichoplusia_ni_ascovirus(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198334.1\|1957_3460_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_165198335.1\|3483_4323_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.1e-10	27.6

DBSCAN-SWA_2

8565 : 59426

Stx2-converting_phage(15.38%)

integrase,protease,transposase

attL 17743:17759|attR 31591:31607

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198340.1\|8565_10083_-\|transposase	transposase	A0A2H4JGQ6	uncultured_Caudovirales_phage	3.1e-11	22.7
WP_165198341.1\|10153_10450_-	hypothetical protein	NA	NA	NA	NA
WP_165198342.1\|12147_12441_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-22	58.6
WP_165198343.1\|12491_12872_-\|transposase	transposase	NA	NA	NA	NA
WP_165198440.1\|13859_14471_-	SMC-Scp complex subunit ScpB	NA	NA	NA	NA
WP_165198344.1\|14476_15430_-	DUF1403 family protein	NA	NA	NA	NA
WP_165198345.1\|15575_16637_-	hypothetical protein	NA	NA	NA	NA
WP_165198346.1\|16633_17578_-	AAA family ATPase	NA	NA	NA	NA
WP_165198348.1\|17568_19215_-\|transposase	transposase	NA	NA	NA	NA
17743:17759	attL	NA	NA	NA	NA
WP_165198349.1\|19318_20407_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_165198350.1\|20411_20735_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_165198351.1\|20721_20967_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_165198352.1\|21088_21970_+	recombinase family protein	A0A0C4UR34	Shigella_phage	3.7e-33	55.4
WP_165198353.1\|22252_23440_+	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	2.1e-87	46.9
WP_165198355.1\|23439_24510_+	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	2.7e-25	34.0
WP_165198356.1\|24665_25715_+	replication protein C	L7TKN6	Rhizobium_phage	1.4e-10	27.1
WP_165198441.1\|26466_26736_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_009820215.1\|26788_27145_+	hypothetical protein	NA	NA	NA	NA
WP_050525478.1\|27173_27467_-	hypothetical protein	NA	NA	NA	NA
WP_165198358.1\|27818_28304_+	hypothetical protein	NA	NA	NA	NA
WP_165198359.1\|28344_29283_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	5.0e-44	36.6
WP_165198442.1\|29306_29516_+	hypothetical protein	NA	NA	NA	NA
WP_165198112.1\|29710_30742_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	9.2e-07	26.0
WP_099911371.1\|31162_31552_+	DUF3768 domain-containing protein	NA	NA	NA	NA
WP_165198110.1\|31707_33690_+	ParB N-terminal domain-containing protein	A0A0F7L836	uncultured_marine_virus	7.9e-07	35.8
31591:31607	attR	NA	NA	NA	NA
WP_025042408.1\|33762_34356_+	hypothetical protein	NA	NA	NA	NA
WP_165198361.1\|34458_35112_+	hypothetical protein	NA	NA	NA	NA
WP_165198362.1\|35236_35563_+	type II toxin-antitoxin system PrlF family antitoxin	NA	NA	NA	NA
WP_165198363.1\|35559_36078_+	type II toxin-antitoxin system YhaV family toxin	NA	NA	NA	NA
WP_165198364.1\|36404_37124_-	hypothetical protein	NA	NA	NA	NA
WP_165198443.1\|37284_38157_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_165198112.1\|38522_39554_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	9.2e-07	26.0
WP_165198366.1\|39979_44242_+	methyltransferase	A0A1X9HW54	Ruegeria_phage	5.1e-11	24.8
WP_165198367.1\|44363_44750_+	hypothetical protein	NA	NA	NA	NA
WP_165198444.1\|44751_45213_+	hypothetical protein	A0A1B1IUL8	uncultured_Mediterranean_phage	1.5e-33	57.8
WP_165198368.1\|45313_45616_+	hypothetical protein	NA	NA	NA	NA
WP_165198369.1\|45740_46469_+	DUF736 domain-containing protein	NA	NA	NA	NA
WP_165198445.1\|46754_47162_+	hypothetical protein	NA	NA	NA	NA
WP_165198446.1\|47310_47892_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_165198370.1\|48134_48923_+	hypothetical protein	NA	NA	NA	NA
WP_165198372.1\|48915_52263_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_165192004.1\|53019_54531_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.1e-96	39.3
WP_165192003.1\|54586_54940_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_165192002.1\|54936_55323_-\|transposase	transposase	NA	NA	NA	NA
WP_165198447.1\|56397_57423_+	hypothetical protein	NA	NA	NA	NA
WP_007120662.1\|58063_58270_+	hypothetical protein	NA	NA	NA	NA
WP_165198373.1\|58832_59426_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

66683 : 67679

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198448.1\|66683_67679_-	fatty acid desaturase	A0A1V0S9E0	Catovirus	1.3e-21	26.2

DBSCAN-SWA_4

85232 : 86321

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198452.1\|85232_86321_-	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	2.2e-27	57.7

DBSCAN-SWA_5

89556 : 90171

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198403.1\|89556_90171_-	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	8.7e-21	54.9

DBSCAN-SWA_6

102720 : 109828

Rhodobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198415.1\|102720_104478_-	DUF2793 domain-containing protein	A0A0K1Y6G9	Rhodobacter_phage	3.8e-37	38.6
WP_165198416.1\|104624_106748_-	polysaccharide biosynthesis tyrosine autokinase	A0A1X9I5D6	Streptococcus_phage	4.6e-13	27.1
WP_165198417.1\|107322_107895_+	sugar transferase	NA	NA	NA	NA
WP_165198418.1\|108020_109151_-	UDP-N-acetylglucosamine 2-epimerase (hydrolyzing)	NA	NA	NA	NA
WP_165198419.1\|109147_109828_-	acylneuraminate cytidylyltransferase family protein	A0A1B1IVD3	uncultured_Mediterranean_phage	1.0e-06	32.7

DBSCAN-SWA_7

113233 : 118125

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198423.1\|113233_114289_-	N-acetylneuraminate synthase	A0A1B1IVE2	uncultured_Mediterranean_phage	2.3e-21	29.2
WP_165198424.1\|114316_115138_-	aldolase	NA	NA	NA	NA
WP_165198425.1\|115156_116974_-	asparagine synthase (glutamine-hydrolyzing)	A0A0N9QYX6	Chrysochromulina_ericina_virus	1.8e-34	25.2
WP_165198455.1\|116979_118125_-	DegT/DnrJ/EryC1/StrS family aminotransferase	E5ES42	Bathycoccus_sp._RCC1105_virus	4.7e-12	24.8

DBSCAN-SWA_8

128996 : 130568

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198434.1\|128996_130568_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.8e-46	28.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP049038

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

95738 : 140657

Yellowstone_lake_phycodnavirus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198304.1\|95738_96089_+\|transposase	transposase	NA	NA	NA	NA
WP_165198100.1\|96085_96439_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.2e-12	33.7
WP_165198098.1\|96493_98071_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.7e-97	39.5
WP_165198096.1\|98039_98615_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
WP_165198326.1\|99092_99713_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_165198327.1\|99735_100365_-	hypothetical protein	NA	NA	NA	NA
WP_165198328.1\|101050_102589_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_050525846.1\|103157_104252_-	alkene reductase	NA	NA	NA	NA
WP_050525845.1\|104441_105428_-	aldo/keto reductase	NA	NA	NA	NA
WP_050525844.1\|105444_106008_-	hypothetical protein	NA	NA	NA	NA
WP_165198214.1\|106004_106937_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_050525842.1\|106947_107625_-	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA
WP_050525852.1\|107634_108672_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_050525841.1\|108684_109842_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_009573562.1\|109846_110263_-	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_143851053.1\|110318_110918_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_009573560.1\|111092_111422_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_050525839.1\|111509_112706_+	MFS transporter	NA	NA	NA	NA
WP_165198329.1\|112891_113575_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.7e-41	45.6
WP_165198216.1\|113859_115086_-	ATP-binding protein	NA	NA	NA	NA
WP_165198218.1\|117220_117619_-	hypothetical protein	NA	NA	NA	NA
WP_165198220.1\|118357_119209_+	helix-turn-helix transcriptional regulator	A0A139ZPK3	Marinitoga_camini_virus	5.4e-05	43.9
WP_165198222.1\|119239_119398_+	hypothetical protein	NA	NA	NA	NA
WP_165198224.1\|119824_120976_+	hypothetical protein	NA	NA	NA	NA
WP_165198226.1\|121207_121612_+	hypothetical protein	NA	NA	NA	NA
WP_165198228.1\|121684_122206_-	hypothetical protein	NA	NA	NA	NA
WP_165198230.1\|122854_123787_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_165198232.1\|123773_125537_-	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	9.5e-20	23.6
WP_165198234.1\|125533_126235_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_165198236.1\|126422_128135_+	acetolactate synthase catalytic subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	7.8e-27	25.9
WP_165198238.1\|128147_129032_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_165198240.1\|129028_130072_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_165198330.1\|130071_130818_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-11	23.0
WP_165198242.1\|130810_131536_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.9e-13	27.5
WP_165198244.1\|131535_132813_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_165198246.1\|132878_133940_+	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_165198248.1\|133936_134683_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_165198331.1\|134710_135691_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
WP_165198250.1\|136584_137799_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.1e-38	41.8
WP_165198252.1\|138408_139173_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	2.6e-43	39.6
WP_165198254.1\|139169_140657_-\|transposase	IS21 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP049037

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP049037_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049037_1

55507-55630

Orphan

Consensus_repeat	Method
GTCGTCGCCATCGCCGCCGA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP049037_1

>merge|NZ_CP049037|1|55507-55630|PILER-CR
TCGTCGCCATCGCCGCCGACAGCCGTGTCGCCCTCGGACAGGTACATCACGTCGTCGCCAGCGCCGCCGTCATAGATGTCCACGCCGCGGTTGCCGGTCATGGTGTCGTCGCCGTCGCCGCCGA

>NZ_CP049037|1|1|55507-55630|PILER-CR
TCGTCGCCATCGCCGCCGAC	AGCCGTGTCGCCCTCGGACAGGTACATCACG
TCGTCGCCAGCGCCGCCGTC	ATAGATGTCCACGCCGCGGTTGCCGGTCATGGTG
TCGTCGCCGTCGCCGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049037.1\|WP_165191871.1\|51683_52460_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|224982
NZ_CP049037.1\|WP_165191816.1\|51271_51499_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049037.1\|WP_165191865.1\|42861_44055_-\|NADH:flavin-oxidoreductase/NADH-oxidase-family-protein	unknown	unknown	gnl\|CDD\|240084
NZ_CP049037.1\|WP_165191869.1\|47909_48587_+\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381596
NZ_CP049037.1\|WP_165191883.1\|68718_69879_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349916
NZ_CP049037.1\|WP_165191875.1\|58065_58515_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931
NZ_CP049037.1\|WP_165191876.1\|58642_60217_+\|Re/Si-specific-NAD(P)(+)-transhydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|236507
NZ_CP049037.1\|WP_165191877.1\|60230_61664_+\|NAD(P)(+)-transhydrogenase-(Re/Si-specific)-subunit-beta	unknown	unknown	gnl\|CDD\|376743
NZ_CP049037.1\|WP_165191864.1\|42206_42713_-\|thioesterase	unknown	unknown	gnl\|CDD\|236044
NZ_CP049037.1\|WP_165191868.1\|46448_47753_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049037.1\|WP_165191867.1\|46083_46410_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP049037.1\|WP_165191882.1\|66937_68677_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NZ_CP049037.1\|WP_165191872.1\|52476_54315_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372590
NZ_CP049037.1\|WP_165191870.1\|48590_51143_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|237585
NZ_CP049037.1\|WP_165191879.1\|63126_63975_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP049037.1\|WP_165191874.1\|57516_57912_-\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP049037.1\|WP_165191878.1\|61843_63124_+\|DUF3422-domain-containing-protein	unknown	unknown	gnl\|CDD\|378758
NZ_CP049037.1\|WP_165191880.1\|63967_64975_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP049037.1\|WP_165191881.1\|65028_66726_-\|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173878
NZ_CP049037.1\|WP_165191866.1\|44357_45869_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489

Protein	Function_ID	Function_description	E-value
NZ_CP049037.1\|WP_165191871.1\|51683_52460_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|224982	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only].	3.47344e-75
NZ_CP049037.1\|WP_165191877.1\|60230_61664_+\|NAD(P)(+)-transhydrogenase-(Re/Si-specific)-subunit-beta	gnl\|CDD\|376743	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit. This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.	0
NZ_CP049037.1\|WP_165191865.1\|42861_44055_-\|NADH:flavin-oxidoreductase/NADH-oxidase-family-protein	gnl\|CDD\|240084	cd04733, OYE_like_2_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	1.68167e-153
NZ_CP049037.1\|WP_165191869.1\|47909_48587_+\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381596	cd00442, Lyz-like, lysozyme-like domains. This family contains several members, including soluble lytic transglycosylases (SLT), goose egg-white lysozymes (GEWL), hen egg-white lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, chitosanases, and pesticin. Typical members are involved in the hydrolysis of beta-1,4- linked polysaccharides.	2.97614e-05
NZ_CP049037.1\|WP_165191883.1\|68718_69879_+\|amidohydrolase	gnl\|CDD\|349916	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
NZ_CP049037.1\|WP_165191875.1\|58065_58515_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	7.27777e-16
NZ_CP049037.1\|WP_165191876.1\|58642_60217_+\|Re/Si-specific-NAD(P)(+)-transhydrogenase-subunit-alpha	gnl\|CDD\|236507	PRK09424, pntA, Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha.	0
NZ_CP049037.1\|WP_165191864.1\|42206_42713_-\|thioesterase	gnl\|CDD\|236044	PRK07531, PRK07531, carnitine 3-dehydrogenase.	1.06222e-38
NZ_CP049037.1\|WP_165191880.1\|63967_64975_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.38102e-107
NZ_CP049037.1\|WP_165191867.1\|46083_46410_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.71108e-28
NZ_CP049037.1\|WP_165191882.1\|66937_68677_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NZ_CP049037.1\|WP_165191872.1\|52476_54315_-\|hypothetical-protein	gnl\|CDD\|372590	pfam13403, Hint_2, Hint domain. This domain is found in inteins.	1.88749e-62
NZ_CP049037.1\|WP_165191870.1\|48590_51143_-\|aminopeptidase-N	gnl\|CDD\|237585	PRK14015, pepN, aminopeptidase N; Provisional.	0
NZ_CP049037.1\|WP_165191879.1\|63126_63975_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.15026e-66
NZ_CP049037.1\|WP_165191874.1\|57516_57912_-\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	5.59602e-26
NZ_CP049037.1\|WP_165191878.1\|61843_63124_+\|DUF3422-domain-containing-protein	gnl\|CDD\|378758	pfam11902, DUF3422, Protein of unknown function (DUF3422). This family of proteins are functionally uncharacterized. This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 426 to 444 amino acids in length.	0
NZ_CP049037.1\|WP_165191881.1\|65028_66726_-\|peptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|173878	cd08513, PBP2_thermophilic_Hb8_like, The substrate-binding component of ABC-type thermophilic oligopeptide-binding protein Hb8-like import systems, contains the type 2 periplasmic binding fold. This family includes the substrate-binding domain of an ABC-type oligopeptide-binding protein Hb8 from Thermus thermophilius and its closest homologs from other bacteria. The structural topology of this substrate-binding domain is similar to those of DppA from Escherichia coli and OppA from Salmonella typhimurium, and thus belongs to the type 2 periplasmic binding fold protein (PBP2) superfamily. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. The type 2 periplasmic binding proteins are soluble ligand-binding components of ABC or tripartite ATP-independent transporters and chemotaxis systems. Members of the PBP2 superfamily function in uptake of a variety of metabolites in bacteria such as amino acids, carbohydrate, ions, and polyamines. Ligands are then transported across the cytoplasmic membrane energized by ATP hydrolysis or electrochemical ion gradient. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.91796e-162
NZ_CP049037.1\|WP_165191866.1\|44357_45869_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0

>NZ_CP049037.1|WP_165191872.1|52476_54315_-|hypothetical-protein
MATLDHDIWLTAGNGTAEDGDITLSEGGNSTIVTADFTENAWDASQSGYNISQFGAFGVTSPIRASFDFSNPVENLTFDLEHVNSSGTTYDDMFTIYAYDHAGNLLDAADVIAGLSGLVDDTVIVNADGSISIEGDGGTANNIGVSLPGRVSQLDLVFEDGPDGSQSGGAGIGDFSFTIPTPLDYIIEGGSGDDTIDASYTGDPEGDRIDNSDHSDGSNDDSVLAGAGNDSVISGAGDDTVFGDDGDDTLIGGEGNDRLDGDSGSDSISGGDGDDTIIGDDGDDTLLGDDGDDEIYVSSGKNTLDGGAGRDQLYGGSGNDSLSGGTGADALSGGGGDDTLNVATGDKASGGDGDDVFVLTDLGEGAGDSISITGGEGDETDGDTLLLTPDVRHDDITFTNPDGDAGGLSGSFNWNGTKVSFSEIEKIICFTAGTQIMTVHGDRPIETLRIGDRVVTRDSGLRAIRWIGKRTVVGRGAMAPISISPAVLDGGRAPLLVSPQHRMLFTGYRAEMLFGRSEVLVAAKHLVNGGDIHEAPCDTVTYIHLMLDAHEIIYAEGTATESFYAGSSGLGAITEESREEMFALFPELRWNTGAHGRTARVCLKPHEARLLQ
>NZ_CP049037.1|WP_165191871.1|51683_52460_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MARPLVGIIGNCYIIDDRFPVHAGGRMNSEAIARAAGCMPLIVPSDPDLVFVDELLDHCDGFLLTGGRPNVHPQHYGEEPTEAHGAFDEARDAITLPLIRACVDRGQPFLGICRGFQEVNVAMGGTLYPEIRDLPGRDNHRMPPDGTLEEQFELRHKVTFSEGGVFHRLMGVQEVMTNTLHGQGIRDAASRIVIDGHAPDGTPEATYVQGAPGFTLSVQWHPEWNAVNDPASRPLFGAFGDAARDWSEAKLRAPRKSA
>NZ_CP049037.1|WP_165191816.1|51271_51499_+|hypothetical-protein
MSAPDTNLKKQKKRHKGPLSGMALVVIFAAILLLALTLRLAYFGNDPGDADDPAEAPVATSPAAVEDNGTVGTTD
>NZ_CP049037.1|WP_165191870.1|48590_51143_-|aminopeptidase-N
MKDAAPQPIYLADYTPPAYLISDVHLTFRLSPSATRVLSRISFRPNPDAKSGEFVLHGENLTLISAAIDGATVSPQLTDTGLTCDVPDAPFVWEAEVEIDPAANTALEGLYMSNGMYCTQCEAEGFRKITYYPDRPDVMAVFTVRIEGDDPVMLSNGNLVAKGDGFAEWHDPWPKPAYLFALVAGQLVNHPGSFTTCSGREVELNIWVRPGDEGKCAFGMQALKDSMRWDEEVYGREYDLDLFNIVAVDDFNMGAMENKGLNIFNSSCVLASPETSTDANFERIEAIIAHEYFHNWTGNRITCRDWFQLCLKEGLTVYRDAQFTADMRSAPVKRIEDVIALRARQFREDNGPLAHAVRPSSFVEINNFYTATIYEKGAEVIGMLKTLVGDAAYYSALDLYFERHDGDAATIEDWLQVFEDATGRDLTHFRRWYDDAGTPRVRVTDDFADGTYTLHLSQNTPPTPGQDNKPPRVIPVAVGLLGSDGDEVRATEVLEMTEATQSFRFEGLNARPVPSILRDFSAPVIIQRDTSPEERAFVLAHDTDPFNKWEAGRTLAREGLLEMICQNEDPDERYLDATLTMARDDSLDPAFRALALGLPSQDDLAQALHDGGTTPDPQVIWDALETLKQARAQAMQDTATRLYAQYQVTEPYRPDAAQSGARALANAALGMITRLDGGAQAQRQYDSADNMTQQLAALGCLLQAGNGDPAVAAFYDQWQHDRLVIDKWFSLQILHARPQDTAAVTERLTRHPDFTLKNPNRFRATLGALTMSPAGFHHVSGAGYALLADWLIQLDPLNPQTTARMSTAFETWRRYDDARQALISAQLDRILAQPNLSRDTTEMVSRIREA
>NZ_CP049037.1|WP_165191869.1|47909_48587_+|lytic-transglycosylase-domain-containing-protein
MIRLALCICIVIFTPSGSAKAEEGSLGQTNPVARPGEIPPTRWQHRPEATRWTRGALAALQAHGQPLTKTVPRDIAEWCPGYVAAEPPQRRAFWVGFLSALAKFESTYRPDAVGGGGKWYGLLQILPATARGYGCRARSGAALKDGTANLSCAIRILAVTVPRDQAIAIKDRRWRGVAADWGPMRSARKRADMASWLRQQSFCAVTTSPRPKARPKPIAEAATGD
>NZ_CP049037.1|WP_165191868.1|46448_47753_-|hypothetical-protein
MPLPSPIMTAAQSFFRHTSLPRLSVLSGKVSYMLRSRRPGRTRADRPDLDALSRRIILPSMPITDEEMARAEFQDRGLKLARQELWDQLAEAIHDADAARTATPGGESAALLLSFGARSDVVAMAEDALFEGTAPPSAGIDAFEAILTDAPDDYARAMIVAATHIDIGWAWRHAPDSPLTETPGARAAQFKAHFDRAADLLTRFSGLAENAPSLAATECALLAAQTCTDRNVADDFEDLIDLDPTSPRHMRALGQTLLPNRLGDYKRLELEARRTASRTGDVWGAGAYAWVYLDALALDAGALDLLDTDFFADGLRDILARCPDQHTANLLAAFCAVSMRPQDDTPHATAAIRASVQENLRWILSDHLHELHPLIWTQALHNPGQPSRLPSRRALISEGRQTALRAIASIFADDISDGSSIAFSPAGMYHLPSI
>NZ_CP049037.1|WP_165191867.1|46083_46410_+|helix-turn-helix-transcriptional-regulator
MGKSENEQRAQAHAIEVVGDKWTLLLVSTLMRNGPSRFLDLQDSLGVSPNTLSARLKRMEGAGLIARHPYSENPPRSAYKLTPSGSALLPVLDAMKLWALQHGVPRKT
>NZ_CP049037.1|WP_165191866.1|44357_45869_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MLDLTYETPKPRVIAGAKHDWELVIGMEVHAQVASQAKLFSGASTRFGAEPNSNVAFVDAAMPGMLPVINEFCIEQAVRTGLGLKAQINLKSAFDRKNYFYPDLPQGYQISQLYEPIVGEGEVLVDMEPGIARLVRIERIHMEQDAGKSIHDMDPNMSFVDLNRTGVCLMEIVSRPDIRGPEEAAAYVLKMRQVLRYLGTCDGNMQNGNLRADVNVSVCRPGQYEKYQETQDFSHLGTRCEIKNMNSTRFIQMAIDYEARRQIGILEAGGSVDQETRLYDPDKNETRSMRSKEEAHDYRYFPDPDLLPLEIEQAWVDEIAASLPELPDAKKARFVNDFGLSEYDASVLTADLESAGYFEAAAAGRDGKLVANWVINELFGRLKKEGADITSSPVNPDQLGGIVDLISSDAISGKIAKDLFEIVYTDGGDPAEIVEKRGMKQVTDTGAIEAAVDQIIADNPAQVEKAKANPKLAGWFVGQVMKATGGKANPKAVNQIVSAKLGL
>NZ_CP049037.1|WP_165191865.1|42861_44055_-|NADH:flavin-oxidoreductase/NADH-oxidase-family-protein
MPKAQISPLAQPLTLPCGATLKNRIAKSAMSDSLGDGAGNPTNDQIRLYEQWAKGGLALSIIGEVQTTPHFAEKPGNLILNGHSDLDLFKRLAKAGETDNAHLWLQLGHAGAMADAPISTPKGPSALDLPGLTCGALSMDEIHALPAEFAQTANLAKELGFGGVQVHAAHGFLLSQFLSPLFNKREDAYGGSLQNRMRLLLEVVDAVRKVVGPEYPVGIKLNATDQLEGGFAENESLEVVATVDQMAIDLIDISGGTYFPGAASSSDRAGSGPYFVEFAGRARQKTNIPLMLTGGFKTRAQAESAIVEDKADLIGLARALVVDPKLPSFWLSGQRSEPQFPRFKNPPEGGVTAWYTMQITQHAKGDAALAPDELEKAIAEYEVRDEARRRIWNSRFS
>NZ_CP049037.1|WP_165191864.1|42206_42713_-|thioesterase
MPQTAPKPENAPFLTDLMEIEPEWIDYNGHLNMAYYTVLFDRGADQVYPLIGFGVDYAEARKLTTYTAEFHIRYMRELHLGDRVRVAFQLIDHDEKRFHSFQHLYHEDGWLAATAEGLTLHVDMTGPKVTPMPQDILDGLGRMQTAHDALPRPEGIGRRIGIGNSIRR
>NZ_CP049037.1|WP_165191874.1|57516_57912_-|MmcQ/YjbR-family-DNA-binding-protein
MTRDEFNTFCARLPETNHVVQWGNADVWKVDTKVFAICGWHENDAAFTFKVSDIAWEVLQDQPGIRPAPYLASRGMKWLQHYAAPGLSDTALSEHLMLSYLLVSENLTRKRRNALGLPDTLEALQQVMTQD
>NZ_CP049037.1|WP_165191875.1|58065_58515_+|isoprenylcysteine-carboxylmethyltransferase-family-protein
MKWLDTPPVWLIGFLALSWIQAHHFGFNLTFGGAWADFVGGLLVGGGVLLIGLAALEFRRARTTIIPHQEAARMITSGIFKRSRNPIYLADALILAGLILRWDAVLALVLLPIFVWIIENRFVIGEENMLRRKFRADFARYCQKTRRWL
>NZ_CP049037.1|WP_165191876.1|58642_60217_+|Re/Si-specific-NAD(P)(+)-transhydrogenase-subunit-alpha
MKIGTPREVLDGEARVAMTPDSALQLQKLGYDCAIETGAGAKAGFSDAAYTAAGVEVIKTAAALWKACDIVAKVRVPTDTELKRLRDGQTLITFFNPGANDKQLKQAAEKGATVVAMEMVPRISRAQKMDALSSMANIAGYRAVIEAGNNFGRFFTGQITAAGKVPPAKVLVVGAGVAGLAAIGTSTSLGAITYAFDVRPEVAEQVESMGAEFVYLDFKEEQTDGAATGGYAAVSSPEFREAQLAKFRELAPEVDIVITTALIPNREAPELWTEDMVAAMKPGSVIVDLAAEKGGNCKLTVMDEKIVTDNGVTIIGYTDFPSRMATQASTLYATNIRHMMTDLTPEKDGTPVHDMEDDVIRGATVTHAGEVTFPPPPPKVAAIAAQPKKEAPKELTVAEKKAREVAAFKAQTKQQVTLLAVGGGLLLAVGLVAPASFMQHFIVFVLAVFVGFQVIWGVAHSLHTPLMAVTNAISSIIILGALMQIGSGSWLVILLASLSVFMAGINIFGGFLVTRRMLAMFQKS
>NZ_CP049037.1|WP_165191877.1|60230_61664_+|NAD(P)(+)-transhydrogenase-(Re/Si-specific)-subunit-beta
MEFGFTTAAYVVAAILFILSLGGLSGQESAKRAVWYGIVGMGLAVLATLIGPGAGLWFLSLLLIAAGGTIGVVVAQRVQMTEMPQLVAAMHSLVGLAAVFVGFNAHIELVRVLAMDDTARKATEGFAALLAKKDSVEIAILRVELFLGVFIGAVTFTGSIIAFGKLAGKVDTAAKKLPGGHMLNAGAAALSVLCLIWYFNTGGFFPLFLMTLAALFIGYHLIMGIGGADMPVVVSMLNSYSGWAAAAIGFSLGNDLLIVVGALVGSSGAILSYIMCKAMNRSFISVILGGFGGPAGAQAAVEGEQVAIDADGVATALNEADSIIIIPGYGMAVAQAQQAVSELTTKLRSKGKNVRFAIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINEDFPETDVAIVIGSNDIVNPAAQDDPNSPIAGMPVLECWKAKQVFVSKRGQGTGYSGIENPLFYKENTRMFYGDAKDSVSSLLPKIE
>NZ_CP049037.1|WP_165191878.1|61843_63124_+|DUF3422-domain-containing-protein
MPPIADYPLRYQLSNELHARPFPSLAAPATALYLAIKRPDRAAARDSGDDRAHLIDLLDRFGATHPSADANHYSGEIGRHQLKWESHTEFVTYTIFKQGVSDRPFDPTDFDLFPADWLERAPGARITSAIIRLTGRADDSVLQSEIDNCFVSESLAVARVLDDAAVVAGDFRIDPAGHTRFAVSAPSGTGPRRLGRIVQRLCEIETYKTVSMLGFARVRGMSARMAEIDTELTRLIAEMSTGERPAEETLKGLLSVSAELEGMVAESSFRFSATAAYQRIVQQRVEVLGEERYEGRQTFAEFMMRRYEPAMRTVEATERRLGAMADRAMRAGDLLRTRVDVERSAQNQALLESMDRRADAQLRLQRTVEGLSVVAISYYAVSLAGYLLYPMAAHLGMSGGLMTAAITLPVIGTVWWVIARIRNSLH
>NZ_CP049037.1|WP_165191879.1|63126_63975_-|ABC-transporter-permease
MIRARSTRTLWFGSILLALIAVSTLIGPIVWGISADQMDLMARNQGPSRTHPLGTDQLGRDLLARVLVGGRISLSVGALAMLMSVASGTLIGVTAGMVRVLDGPLMRLTDLFLSLPLLPLVLIAITLFRAPLSVAFGPETGIFILVVVVIGATSWMPTARVVRGEVLGVMGRSYIMAARSTGTRGVIIAMRHVLPNSRSAIIVSATLSAATAIITESTLSFLGLGFPPDFATWGRLLFDGTTYLSDYPGRALWPGALISASVLAIVYIGDGLRDRGDPRSNS
>NZ_CP049037.1|WP_165191880.1|63967_64975_-|ABC-transporter-permease
MLNYTIRRLILALPTLVAISLVVFALMELAPGDPMAQLPPTISPEVKAQMRAALGLDAPSHVRFGKWLWQLGIIEPSVWIDGMFGTALSDGQARMISWQTRGPVMDLIAQRLPQTLWVVGLAYLIGTALALPIGIWSAYRQYSPFDQIATGVSTLGFAVPPFFSGVLLILFFSVQLEWLPSVYDTTLDVTNWQSLGQQLKQMALPVAVLSLQTTAQISRYVRSAMLDQLGRDYVRAARARGVGERHLLLRHVLPNAMAPVVSIIALGLPQIFAGAIVTEQIFRVNGVGHLLITSIQANDLPTVQTITVLLAGLIVISNLLADLIYGALDPRIRYD
>NZ_CP049037.1|WP_165191881.1|65028_66726_-|peptide-ABC-transporter-substrate-binding-protein
MTFANTFIGIALGALVALPLAATERGSDGDLRILYWQAPTTMNPYLSGGIKDNEAASLTLEPLARYDPAGVMLPWLVDVIPTLENGGVDDDLTRITWRLKDGLRWSDGSAVTSADLRFTWRYCTAKDGGCAQLEKFADVVDVETPDERTAVVVFSKPKPFPYGPFVGPQAPILQAAQFADCLGTRAPTCTDANYGPIGTGPFRVTEFRPGDVVVYEVNPEYRDPTKPAFAKVVIKGGGSAVGAARAVLETGEFDYAWNLQLSPDVLSRMQARGKGEIISAFGSLVERIAVNFTDPSPELGSARSTVAHPHPVLSDPAVRRALSMALDRKMLSDIGYGPAGRPTCNLLPIASENADTNCLRQDLEGARALLDQAGWIDSNGDGVRDKNGRDLHLIFQTSTNSVRQDFQAVTKEWWRQIGVETELRNIDASVFFGGDPGSPDTVQKFYADVEMFAGAFDGTDPEVYLTTWTCGNAPSPENQWQGTNTSRWCDPAYDALAAKLAITGGIAPRATLAMAMNDMLVENGVVLPLVDRGRVSAHALDLGGTAINAWDSELWNIADWHRIKE
>NZ_CP049037.1|WP_165191882.1|66937_68677_+|ABC-transporter-ATP-binding-protein
MSSSPLLSLRNVCVSFDGADTPGAVLRDLSLHINAGEVLCLVGASGAGKSIASLVALRLEGHDGAVLSKGQILLDTPDGQVNLAKMDTAQLRALRGKQIGLIFQDPSTALNPVMTVGAQLVEILSLHRGLSSQAARAEALTLLHEVQMPEPELHLGQYPHELSGGQRQRVMIAIALSGAPRILIADEPTTALDVRVQAGILTLLDRLRRDRGIALLLITHDMGVVAQIADRIAVIEAGTIVEEGTVREVFSAPRHPETQRLLKAAQSGPTTRQLASDQTVVLEVRSLSLNYPRRSGLLRRVTGQTAAVRDVSFGIDQGETLALVGESGSGKSSVARALMQLEPYATGEVLLEGMSLTRSRGAALRQERARIQMVFQDPSDSLDPRLTLGAQVAAPLHNFKVGARHTRNARVEALFRLVRLDPALMQRYPHQVSGGQCQRVAIARALALQPAVLIADESVTALDAPVRAEILDLFARLQAELGLAILFISHDIGTVSRIAQRIAVMHRGRIVEHGPTSAVLAQPAHGYTRALLDAVVHPDPERRRQFDLPRKADRLGDMPDPEVAVQYRCIGPKHFVLSA
>NZ_CP049037.1|WP_165191883.1|68718_69879_+|amidohydrolase
MPVKNRFAEMHDEITEWRRDIHTHPELMFDTHRTSALVAEKLRAFGCDEVVTGIGRTGVVGVIQGAVQGSGRVIGLRADMDALPIHEATGLDYASQTPGKMHACGHDGHTAMLLGAAKYLCETRNFDGTAVVIFQPAEEGGGGAKVMCDDGLMDRFGIQEVYGMHNWPGVPVGQFAIRPGPFFAATDLFELTLHGRGGHAAKPHETIDPIVMASQMIMALQTISSRNADPTEQIVVSVTSIESSSTAFNVIPQSVLLKGTVRTLSADMRDLAETRFATICDHTAQAMGGTAEITYDRNYPVMVNHAAQTEFVADVARSVSGTCAEAPLVMGGEDFAFMLEERPGAYILVGNGDTAMVHNPEYNFTDDAIPAGCSWWAELIEQRMPA

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Crispr_ID: NZ_CP049037_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049037_2

1352049-1353333

TypeII

Consensus_repeat	Method
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACC	PILER-CR
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CRISPRCasFinder
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CRT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	PILER-CR

19 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP049037_2

>merge|NZ_CP049037|2|1352049-1353333|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCCAACAGACGGAAGCTGGCCCGGTGAGGGTATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCCGCCAAACCGGCTCGTGCTGGCGGCAAAAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCCTGTGAGCATAGGAACGCAATCGCCACGAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACGGACAGAGGTGGGGTTCCACGCGCCTCCTAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCGAAGTCGGGCACGCGGGATGAATCGTCAGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCCAGCGCCCGCGCAATCCTGTTGATCGGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCGACGATGAGGACGGATCAAAAGCAAAGCGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACTACCATTGACCTCAAACATTCGTTTTGAAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACTGCCCACGGTCCCCCTAACGGACGCTGAGTATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACGATCCGATGCAGCAGGCCATGCAGCAAATGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCACTTCGGTGTCGCAACGACAGCGGAACCAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACATTGTAGTTACACGAGATTTGCGGTTGGTATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCCCGGCTCGCGATCGGCTACCAACGCCGGAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACGATGATCGCGCGCGCGACTACATCTGGCAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACTCTTGCAGCAGGAGTAACGCCCTGCCCGCGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACGACGGAGATGTATGGAAATATCGTAGAACCATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACACTCCGGCAGATTGGCCTCCACCAACGTAAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCGCCAGCAACAAAGAGCATGCGCTCTATCTATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACGGCCATACCCAACGTTACAAAAGGATGCAGATTGTAGCTGTTCAAAATTCGCGGTCTGAACCGCTC

>NZ_CP049037|2|2|1352049-1352415|PILER-CR
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACC	CAACAGACGGAAGCTGGCCCGGTGAGGGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACC	CGCCAAACCGGCTCGTGCTGGCGGCAAAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACC	CTGTGAGCATAGGAACGCAATCGCCACGA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACG	GACAGAGGTGGGGTTCCACGCGCCTCCTA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACC	GAAGTCGGGCACGCGGGATGAATCGTCAG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCCAGCGCCCGCGCAATCCTGTTGATCGGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCGACGATGAGGACGGATCAAAAGCAAAGCGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACTACCATTGACCTCAAACATTCGTTTTGAAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACTGCCCACGGTCCCCCTAACGGACGCTGAGTATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACGATCCGATGCAGCAGGCCATGCAGCAAATGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CACTTCGGTGTCGCAACGACAGCGGAACCA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	ATTGTAGTTACACGAGATTTGCGGTTGGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCCGGCTCGCGATCGGCTACCAACGCCGGA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GATGATCGCGCGCGCGACTACATCTGGCA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	TCTTGCAGCAGGAGTAACGCCCTGCCCGCG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GACGGAGATGTATGGAAATATCGTAGAACC
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	ACTCCGGCAGATTGGCCTCCACCAACGTAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CGCCAGCAACAAAGAGCATGCGCTCTATCT


>NZ_CP049037|2|1|1352049-1353333|CRISPRCasFinder
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCAACAGACGGAAGCTGGCCCGGTGAGGGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCGCCAAACCGGCTCGTGCTGGCGGCAAAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCTGTGAGCATAGGAACGCAATCGCCACGA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GGACAGAGGTGGGGTTCCACGCGCCTCCTA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CGAAGTCGGGCACGCGGGATGAATCGTCAG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCAGCGCCCGCGCAATCCTGTTGATCGG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CGACGATGAGGACGGATCAAAAGCAAAGCG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	TACCATTGACCTCAAACATTCGTTTTGAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	TGCCCACGGTCCCCCTAACGGACGCTGAGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GATCCGATGCAGCAGGCCATGCAGCAAATG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CACTTCGGTGTCGCAACGACAGCGGAACCA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	ATTGTAGTTACACGAGATTTGCGGTTGGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCCGGCTCGCGATCGGCTACCAACGCCGGA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GATGATCGCGCGCGCGACTACATCTGGCA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	TCTTGCAGCAGGAGTAACGCCCTGCCCGCG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GACGGAGATGTATGGAAATATCGTAGAACC
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	ACTCCGGCAGATTGGCCTCCACCAACGTAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CGCCAGCAACAAAGAGCATGCGCTCTATCT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GGCCATACCCAACGTTACAAAAGGATGCAG
ATTGTAGCTGTTCAAAATTCGCGGTCTGAACCGCTC

>NZ_CP049037|2|1|1352049-1353333|CRT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCAACAGACGGAAGCTGGCCCGGTGAGGGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCGCCAAACCGGCTCGTGCTGGCGGCAAAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCTGTGAGCATAGGAACGCAATCGCCACGA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GGACAGAGGTGGGGTTCCACGCGCCTCCTA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CGAAGTCGGGCACGCGGGATGAATCGTCAG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCAGCGCCCGCGCAATCCTGTTGATCGG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CGACGATGAGGACGGATCAAAAGCAAAGCG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	TACCATTGACCTCAAACATTCGTTTTGAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	TGCCCACGGTCCCCCTAACGGACGCTGAGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GATCCGATGCAGCAGGCCATGCAGCAAATG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CACTTCGGTGTCGCAACGACAGCGGAACCA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	ATTGTAGTTACACGAGATTTGCGGTTGGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCCGGCTCGCGATCGGCTACCAACGCCGGA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GATGATCGCGCGCGCGACTACATCTGGCA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	TCTTGCAGCAGGAGTAACGCCCTGCCCGCG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GACGGAGATGTATGGAAATATCGTAGAACC
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	ACTCCGGCAGATTGGCCTCCACCAACGTAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CGCCAGCAACAAAGAGCATGCGCTCTATCT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GGCCATACCCAACGTTACAAAAGGATGCAG
ATTGTAGCTGTTCAAAATTCGCGGTCTGAACCGCTC

>NZ_CP049037|2|3|1352706-1353267|PILER-CR
	CAACAGACGGAAGCTGGCCCGGTGAGGGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACC	CGCCAAACCGGCTCGTGCTGGCGGCAAAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACC	CTGTGAGCATAGGAACGCAATCGCCACGA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACG	GACAGAGGTGGGGTTCCACGCGCCTCCTA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACC	GAAGTCGGGCACGCGGGATGAATCGTCAG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCCAGCGCCCGCGCAATCCTGTTGATCGGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACCGACGATGAGGACGGATCAAAAGCAAAGCGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACTACCATTGACCTCAAACATTCGTTTTGAAATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACTGCCCACGGTCCCCCTAACGGACGCTGAGTATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAACGATCCGATGCAGCAGGCCATGCAGCAAATGATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CACTTCGGTGTCGCAACGACAGCGGAACCA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	ATTGTAGTTACACGAGATTTGCGGTTGGT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CCCGGCTCGCGATCGGCTACCAACGCCGGA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GATGATCGCGCGCGCGACTACATCTGGCA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	TCTTGCAGCAGGAGTAACGCCCTGCCCGCG
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	GACGGAGATGTATGGAAATATCGTAGAACC
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	ACTCCGGCAGATTGGCCTCCACCAACGTAA
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC	CGCCAGCAACAAAGAGCATGCGCTCTATCT
ATTGTAGCTGTTCAAAATTCGCGGTCCAGCCGCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049037.1\|WP_165197702.1\|1340883_1342563_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP049037.1\|WP_165193384.1\|1347404_1350659_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187774
NZ_CP049037.1\|WP_165193405.1\|1364150_1365317_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|365919
NZ_CP049037.1\|WP_165193399.1\|1359424_1360435_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213261
NZ_CP049037.1\|WP_165193388.1\|1351669_1351975_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP049037.1\|WP_165193403.1\|1362432_1364094_+\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|235000
NZ_CP049037.1\|WP_165197704.1\|1355687_1356839_+\|M20-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349944
NZ_CP049037.1\|WP_165193398.1\|1358484_1359378_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270361
NZ_CP049037.1\|WP_165193396.1\|1357614_1358382_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132035
NZ_CP049037.1\|WP_165193392.1\|1354737_1355601_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP049037.1\|WP_165193386.1\|1350722_1351634_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP049037.1\|WP_165193378.1\|1344556_1344940_-\|DUF2924-domain-containing-protein	unknown	unknown	gnl\|CDD\|371394
NZ_CP049037.1\|WP_165193394.1\|1356835_1357618_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|224982
NZ_CP049037.1\|WP_165193376.1\|1342929_1344555_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP049037.1\|WP_165193372.1\|1338432_1339719_+\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
NZ_CP049037.1\|WP_165193382.1\|1345516_1346902_+\|transposase	unknown	unknown	gnl\|CDD\|377531
NZ_CP049037.1\|WP_165193390.1\|1353463_1353754_-\|DUF3489-domain-containing-protein	unknown	unknown	gnl\|CDD\|371839
NZ_CP049037.1\|WP_165193374.1\|1339805_1340771_+\|class-II-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236536
NZ_CP049037.1\|WP_165193380.1\|1344993_1345290_-\|DUF3489-domain-containing-protein	unknown	unknown	gnl\|CDD\|371839
NZ_CP049037.1\|WP_165193401.1\|1360518_1362417_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226644

Protein	Function_ID	Function_description	E-value
NZ_CP049037.1\|WP_165197702.1\|1340883_1342563_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	3.34528e-178
NZ_CP049037.1\|WP_165193384.1\|1347404_1350659_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|187774	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Very large protein containing McrA/HNH-nuclease related domain and a RuvC-like nuclease domain; signature gene for type II.	6.12106e-43
NZ_CP049037.1\|WP_165193405.1\|1364150_1365317_+\|aldehyde-dehydrogenase	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	3.56239e-137
NZ_CP049037.1\|WP_165193399.1\|1359424_1360435_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213261	cd03294, ABC_Pro_Gly_Betaine, ATP-binding cassette domain of the osmoprotectant proline/glycine betaine uptake system. This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.11903e-132
NZ_CP049037.1\|WP_165193388.1\|1351669_1351975_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.83659e-22
NZ_CP049037.1\|WP_165193403.1\|1362432_1364094_+\|choline-dehydrogenase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	0
NZ_CP049037.1\|WP_165197704.1\|1355687_1356839_+\|M20-family-metallopeptidase	gnl\|CDD\|349944	cd08659, M20_ArgE_DapE-like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like. Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) like family of enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this family are mostly bacterial and have been inferred by homology as being related to both ArgE and DapE. This family also includes N-acetyl-L-citrulline deacetylase (ACDase; acetylcitrulline deacetylase), a unique, novel enzyme found in Xanthomonas campestris, a plant pathogen, in which N-acetyl-L-ornithine is the substrate for transcarbamoylation reaction, and the product is N-acetyl-L-citrulline. Thus, in the arginine biosynthesis pathway, ACDase subsequently catalyzes the hydrolysis of N-acetyl-L-citrulline to acetate and L-citrulline.	3.66569e-102
NZ_CP049037.1\|WP_165193398.1\|1358484_1359378_+\|hypothetical-protein	gnl\|CDD\|270361	cd13643, PBP2_BCP_2, Substrate-binding domain of osmoregulatory ABC-type glycine betaine/choline/L-proline transport system-like; the type 2 periplasmic-binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to certain quaternary ammonium compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine, proline betaine, choline, and carnitine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	9.92865e-83
NZ_CP049037.1\|WP_165193396.1\|1357614_1358382_+\|hypothetical-protein	gnl\|CDD\|132035	TIGR02990, ectoine_eutA, ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.	1.30794e-56
NZ_CP049037.1\|WP_165193392.1\|1354737_1355601_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.52456e-37
NZ_CP049037.1\|WP_165193386.1\|1350722_1351634_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	6.03752e-75
NZ_CP049037.1\|WP_165193378.1\|1344556_1344940_-\|DUF2924-domain-containing-protein	gnl\|CDD\|371394	pfam11149, DUF2924, Protein of unknown function (DUF2924). This bacterial family of proteins has no known function.	1.55702e-35
NZ_CP049037.1\|WP_165193394.1\|1356835_1357618_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|224982	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only].	4.15281e-65
NZ_CP049037.1\|WP_165193376.1\|1342929_1344555_-\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	3.34625e-45
NZ_CP049037.1\|WP_165193372.1\|1338432_1339719_+\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0
NZ_CP049037.1\|WP_165193382.1\|1345516_1346902_+\|transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	8.66761e-29
NZ_CP049037.1\|WP_165193390.1\|1353463_1353754_-\|DUF3489-domain-containing-protein	gnl\|CDD\|371839	pfam11994, DUF3489, Protein of unknown function (DUF3489). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 84 to 211 amino acids in length. This protein has a single completely conserved residue W that may be functionally important.	1.3594e-12
NZ_CP049037.1\|WP_165193374.1\|1339805_1340771_+\|class-II-fructose-bisphosphatase	gnl\|CDD\|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	0
NZ_CP049037.1\|WP_165193380.1\|1344993_1345290_-\|DUF3489-domain-containing-protein	gnl\|CDD\|371839	pfam11994, DUF3489, Protein of unknown function (DUF3489). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 84 to 211 amino acids in length. This protein has a single completely conserved residue W that may be functionally important.	7.24476e-11
NZ_CP049037.1\|WP_165193401.1\|1360518_1362417_+\|ABC-transporter-permease-subunit	gnl\|CDD\|226644	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].	4.76796e-65

>NZ_CP049037.1|WP_165193388.1|1351669_1351975_+|CRISPR-associated-endonuclease-Cas2
MWILVMFDLPTDTRQQRKAAGTFRNFLLDEGFERSQFSVYARFVNGKEAFATRIIRIERHLPDMGDIQILNFTDRQYRDIIHFSDQGRRKARENPKQLVMF
>NZ_CP049037.1|WP_165193386.1|1350722_1351634_+|type-II-CRISPR-associated-endonuclease-Cas1
MDQIIDIATDGRHLSRDRGFLKVSEDGVEIGRTPLDQIAAVIVHAHGTTWSTSLLTELAERGAPVVLCAANHAPKSVLMPLEGHHMQGARMRAQWQAKIRFIKQAWKQVVTAKVRMQATALEAIGEPPAPLLMMVRKITSGDSTNIEAQAARHYWPRIMGTEFRRDTGAADENALLNYGYTVLRAATARAVVAAGLHPTIGLFHTNRSNAFALADDMMEPFRPLVDCAVRSIVIAHGAEVDTEAKQSLAQLIATDLPLGGGITPVSVALMKLATSLGQSFEAGKLTLALPEPPDALTLAGLGK
>NZ_CP049037.1|WP_165193384.1|1347404_1350659_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MRLGLDIGTNSIGWFLYATNNGQISDVVDGGVRIFSDGRDPKSKASLAVDRRAARAQRRRRDRFLRRKAALMKRMAEVGLMPTDPAQAKTLELLDPYALRAEGLDQALPLTHFGRALFHLNQRRGFKSNRKTDRGDNESGKIKDATKRLDEEMAIKKARTYGEFLHMHRSEKPEKPSLQPRMNKDGSRTDDRMTKTVRTRLSVARRDNAEKEEAGYDFYPDRRHLSDEFEQLWAAQAKYHPDALTDDLRDEIALIIFHQRPLKTPKVGLCLFTDDERIPSAHPLNQRRILFETVNALRVAVRGEAARELTREERDQIVHALDNKKHTKSMSGMSIKLRALGKVIKLRTDQVFTLETANRDAIACDPVRASLSHPDRFGPRWPQLDAGAQWEVIKRIRAVQSEAEHEALVAWLMTTHALERGHADHTARAPLPEGYARLGLTATTQILAALEADVIPYSAAVAACGWHHSDGRTGEVLTELPYYGQILDRHVIPGSYDEQDDDVTRYGRITNPTVHIGLNQLRRLVNRIITVYGRPDEIVVELARDLKLSEDQKRDVQRDIKKNTDAAIARGKKLEEMGVPNTGANRMVLRLWEGLGDDVMTRNCPYSGRRISAGMLFDGSCDVDHILPYSRTLDDGFANRTLCLKEFNRQKANKTPWEAWGNTPQWEAIAANLKNLAPNRAWRFATDAMERFEGEKDFSDRALKDTQYLSRIARTYLDALYDGQDKKRHVWVVPGRMTEMLRRHWGLNNLLTEGKAAVKAKNRTDHRHHAIDAAVVAATDYGLINRISKAAGRDEKDGKGAGEVARTTPEPWEGFRADIGAQLDKIIVSHRADHGRIDREGRRKGRDSTTGQLHNDTAYGIVDDQTVVSRTPFLSLKPGDIELTTRGKNIRDAQLQKALAVATKGKDGKPFEEALRLFAAKPGPYQGIRHVRLIETLQASARVEILDATGKPVKAYKGDSNHCYEIWRMPDGKAKAQVITTFEAHGKIARRPHPAAKRLLRVFKRDMVVIERECEMLICYVQKFDPANGVFLAPHIEANVDARNRDKNDPFRLRQMGTGPAIKAKIRRVYVDEMGRMRDPGTAS
>NZ_CP049037.1|WP_165193382.1|1345516_1346902_+|transposase
MMGPRQAAQPSLFYEFSLEDHVPQDHLLRSIDRFVDLTDVRAYLADFYSHTGRPSVDPELLIRMLLVGYCFGIRSERRLCEEVHLNLAYRWFCRLDLSDRVPDHSTFSKNRHGRFRESELLRHLFETTVARCIQEGLVSGQRMAIDASLIEADANKQNSTPKENWDAGQIDPADAPRAVREYLDTLDEAAFGAASEVQPKFTSRSDPASQWTAARKGPAFFSYSDNYLIDTDHGVILDVEPTRSIRQAEVGSTKTMLKRVKEKFDLHPERLIADTAYSTGPMLGWLVERKINPHIPVFDKSGRSDGTWSRADFEWDAENDQYICPEGQELKQFRRNYSDPNRGPTGQGRTKYRALKLTCQTCPSKAKCCPNADARSITREEHEDARQIARDIAKTKQYDISMKLRKKVEMLFAHLKRILGLGRLRLRGPCGANDEFLLAATAQNIRKLAKIFPAPQQTRTA
>NZ_CP049037.1|WP_165193380.1|1344993_1345290_-|DUF3489-domain-containing-protein
MVTVSNTKAATSAGAKDAKSTGNTDKKFPTQKTKKAQLTAMLQRKSGASVGALEKQFGWQPQTIRAAISGLRKSGSTIERSTGKSGAVYRIVEPAPGR
>NZ_CP049037.1|WP_165193378.1|1344556_1344940_-|DUF2924-domain-containing-protein
MDRATCCDAWARAFKSRPPKYASVKFMQRVLVHHVQCQLLGGSSAATNRALRIALTPADAATGSKAVRHGATLIREWNGRMYRVDVASDHYSLDGKTFKSLSAVAQHITGARWSGPRFFGLTAKRSA
>NZ_CP049037.1|WP_165193376.1|1342929_1344555_-|recombinase-family-protein
MRRVRCAIYTRKSTEEGLEQEFNSLDAQREACEAFIASQRHEGWQLLDRSYDDGGISGGHMDRPALQRLMQDVDDRQVDQIVVYKIDRLTRSLADFAKLVDRLDAAEASFVSVTQNFNTSSSMGRLTLNVLLSFAQFEREVTAERIRDKIAASKRKGLWMGGSVPLGYDADGRTLKINEDEATSIRALYDLYETHGALNAVTAEAAKLGIRSRQKSTQDGARRGGNILSRGHVHYILKSPIYAGRIPHKGKVFEGQHPAIVDPECWESVQQRLANKAPVEAVCETRLTQSSPLTGKLFDERGERLSPSHTRKCNRRYRYYISRGYVTGRKNDLQAKGWRLPAETFERFVADAIRTHLSCGPGKDLILDPDVETVRLLNELTKGDDATLLSTLSRARIGERTIELCLGSNELARICHTKQANIDEQVLSFDVPFIQKRRGVETRFIMSDVSSNPDPALIGNVARAHRWIDRLKAGEDFDEIATSASTTRKRVQQTIEFAFLAPDIVRDIIAGKQPIGLTSTWCMTHEVPAEWQAQRALIASL
>NZ_CP049037.1|WP_165197702.1|1340883_1342563_+|single-stranded-DNA-specific-exonuclease-RecJ
MDRQAEALAQQTALPRPLCQILARRGVDVAGAESFLAPQLRDLLPDPRSLKDMERAATRLLSAVAASERIAIFADYDVDGGSSAALLLDWLGQMGRTATLYVPDRIDEGYGPNDEAMAALAKEHDLIVCVDCGTLSHGPVAAAKDADVIILDHHLGAETLPDALAVVNPNRQDETGDLAHLCAAAVVFLALVEAGRQLREAGKAGPDLMAMLDLVALATVADVAPLIGVNRAFVRQGLRIMARRDRPGLVALADVARLDTAPAAYHLGYLLGPRVNAGGRIGKADLGARLLASTNPAEARAMAERLDQLNTERREIEAAVQAAALDQAETRGLDAPLVWASGEGWHPGVVGIVASRLKEAANRPAIVIGFDGEIGKGSGRSISGVDLGACIQRLAAEGLLIKGGGHKMAAGLTVARDQLQAAMDRLSDLLARQGADRAGAADLALDGLMMPGAATPELITQVDAAGPFGASAPAPRYAFADMRITFAKRVGERHLKLRFGDGTGPQLDAISFGAFDGPLGPALEAHGGARFHLAGRLEINRWQGRESAQLRLEDAAQPG
>NZ_CP049037.1|WP_165193374.1|1339805_1340771_+|class-II-fructose-bisphosphatase
MTAETDFNDRMLSLGLARVSEAAALACADLIGRGDEKAADQAAVNAMREQLNRLAIKGVVVIGEGERDEAPMLYIGEEVGSGDGPGVDIALDPLEGTTLTAKAMPNALTVIAMAPRGSLLHAPDVYMDKLAIGPGYPKDVVSLDMSPRERVEALAKAKGCAPSEITVCVLERPRHEDTIAELRSTGAAVYLIPDGDVAGVIHCAEARLTGIDMYMGSGGAPEGVLAASALKCMGGQIWGRLLFRNDDERGRATKAGITDFDRVYSRDEMVTRDVIFAATGVTDGSLVAGIKRRQEYVETETVLMRSKTGSVRRMLYRNPIA
>NZ_CP049037.1|WP_165193372.1|1338432_1339719_+|homoserine-dehydrogenase
MTDPLRLGIAGLGTVGVGTVKIIRQKANLLAARAGRPIQITAVSARTKDKDRGVNLSDYAWENDPVALAQRDDVDVFVELMGGSEGAAKDATEAAINAGKDVVTANKALLAHHGHELALSAEAAGRVIRFEAAVAGGIPVIKALSEGLAGNDITRVMGVMNGTCNYILTRMQSAGLPYAEVFEEANQLGYLEADPTLDVGGIDAGHKLSLLAAIAFGTQVNFDAVELEGIEKITIQDIHHAADMGYRIKLLGVCQMTGRGLEQRMSPCLVPDNSPLGQLEGGTNMCVLEGDNVEQIVLRGPGAGMGPTASAVMGDVMDIARGFRMPVFGRPAAELECAKPARAVMPAPYYLRLGLEDKPGTLAKVAAVLGEAGVSIDRMRQYQHDDSTAPVLIVTHKTTRAALDSALETMSRLDVMTAEPVALRIESV
>NZ_CP049037.1|WP_165193390.1|1353463_1353754_-|DUF3489-domain-containing-protein
MASTTTSNRTANDAADRKALVTGKASKQHTTKKQRLQALLRRKGGASLDALQKEFGWQPHTVRAAISGVRKAGNTVVCITGKSGSVYRIVATKAAQ
>NZ_CP049037.1|WP_165193392.1|1354737_1355601_-|LysR-family-transcriptional-regulator
MHTDHLRSFRTVATSGSFTAAAKLLSKSQSTVSGQVSGLEDHLGVQLFVRTTRSCRLTPEGRELFEYSEVVLEAVDRIYDALSPTLLGGKVKVGVPDDGYLFQLITDGLRSFIGKRPDVNIEIVAGLADDLNVSLASGLLDLAVVRDVHTEGDPICVSQLSWIAKPDFTLPEDGVLPLAHVNKPCCYYKEATNTLSACAISWKSTVSCTSLQGVLAMVQSGLTVAAVLEDENIDSNLFTHKLDLPALPRFGLSFRFASEKPPMLARLIAKAIRKSLDQYVLLDRSIE
>NZ_CP049037.1|WP_165197704.1|1355687_1356839_+|M20-family-metallopeptidase
MQNHSGAKVKDTHSFDVAAFLQKLIEIPSCDPPGDESAVAHLVHDSMTALGIPSQMDEFLPGRINVLGRVKGRGEKKPLLFSAHLDTTPIGAQDWSFPPFAGDVVDGHIRGRGASDMKSAVAAFVAAAADIAGRDTPLAGDIILAFTAGESSNCLGAKRFVEQGLQDEIGAFLCGEPSTLDIITVEKAILWLEAKAVGKIGHVSGELGINAISLMAKFLTELESLTLDLPQHPLLSDPTINVGRIEGGSAVNVTPDACRAEVDVRFGPGIEVSEVIHQIELIMPEGISLEVSDFKPAVEENPESEFVSICKSACRKSTGSDPEVKGVSYYSDGAILLDGIKAPFAIVGPGYLGMSGQRDETILVRNLRDSVDIYRRIAEEWLA
>NZ_CP049037.1|WP_165193394.1|1356835_1357618_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MRKLRPLIGLTADVETRDAGSTETEYVLRANYASAIIDAGGLPVILPHDPDLAALYVAQIDGLIVTGGLFDIHPIHYGETLTAPLKLKEDRTDFELAMLDGGLMVDMPIMGICNGMQLLAVKLGGKLVQDIQRDIEGGIEHLPSPVPDKSAHGVALRQGSVLSDLAGVTTARVNSLHHQAVVPANGYDVSATSVEDGVAEAIEAKGRRFCVGVQWHPEYHTSTLDRALLDGFVAAAAQYTSQKTDPTAQRSSAKKRAVGV
>NZ_CP049037.1|WP_165193396.1|1357614_1358382_+|hypothetical-protein
MTIPTANLVSVPLAHKTVAWRIGLVVLSSDPTIEHSFQRMLAQTSDIALHCNRIAFDGEISVSSLSTMMDRIEAVAAEIMPGQELDAILYGCTSASAAIGDDKVRASLIKGKAVASGSAHTPVSGLVAALEVMKSKKISLITPYPVDVTEMVAQYLGSMGVNVVALTCLGLKQDWQNGQISADQIVDLARSIDHKGADTLVLSCTALRGAEAIDEAEIATGMKVISSNQALLWHGLRKAGCDIRLNGFGELLRTH
>NZ_CP049037.1|WP_165193398.1|1358484_1359378_+|hypothetical-protein
MKTTRRILLLATCAMMAGGSAAMADVETRKPIKVLMINSADGDFMAAVYGEILREVGYRVDYVQADYAASFTAVASGDIDVSLAAWQTTGVELTKAAVDSGQVTDYGPTGVLVTEGWWYSNALKEFCPGLPDWNALKEPGCVKALETAETAPKGRYLDAPADWGTLSDATIEDLDLELAVINSGSPGTLVAAVKGALDRQEPILAWGYLPHWLYNTENGEFVELPGFQRDLDILKLGYDQTFDRAKMAGEILSAYTISTEAVAVGMDAIDNNGMTAEEAAQAWMSENESTWQAWVPE
>NZ_CP049037.1|WP_165193399.1|1359424_1360435_+|ATP-binding-cassette-domain-containing-protein
MQQDRIIEASGIWKVFGDTAAINCAKSTDPTEEDVLASGGVAGLIDANIDVYRGEIFMIMGLSGSGKSTLLRCLTGLYSSTRGKITIGDTELTSATKAEMVKFRRKKISMVFQNFALLPHLNSLDNVAFPLRVQGTSVAERRKIARDTLKLVGLEGKEGFFPSELSGGQQQRVGIARSLVTNPDVWFLDEPFSALDPLIRREMQDEFRRLQEQLHKTIIFVTHDLEEAVRLGDRIVVMEKGRIVQIGTPEELILKPVNDYVRKFVAGLSKDTVIKVRSILEPLEKDAVDGQHVKADATLSEVTRQIVESVQPLKVEDAAGKIIGQVSRQGLAQWLT
>NZ_CP049037.1|WP_165193401.1|1360518_1362417_+|ABC-transporter-permease-subunit
MFLNPGNVLAAYPDAWVIDLAEPFDRGLKYISKDLSIGALSVSDITRSISELIGAPIEFFNGLLVEGFYFSIGEDYYELPPLSWVTTAALLVLLPMWVGGLRIGLLAAFTVFYALVFGLWESTILTLVSVLFSVAFATFIGLVLGILASRSDTVSAILRPVYDALQTIPVFSYLSIILVFFGFGPVAALIATVIFALAPMARTTELALRQTPQAIQELAEITGCSPRQRLFLVTLPAARTSLMIGINQVTMLSLAMVIIASIIGAGGLGSDVLRGLKSMRLTEALLAGLAISLVAITIDRTLRTWTEHRRDVHDDKPSDRRIVWLIAGVLLLISVVAYFSEALLFAPTKPLIENSRVLDDMLTNLNLFVRDDLAVVQDGFISWIMVPYRNFIASLPWLPFALLVGVAATALKGVRLGLMCFLLVASLAIFGLWARAMLSFYLVTLALFVGLVIGLPLGVMAGLNRRAYMIVEICSDVIQTLPTFVYLIPVVVLFGAGDFPALIAIIIYLFAPIIRYTANGIQQVSSSTLCEAADMTGCTMLQRLRLVLLPVAMPQIVLGINQAVMLGFGMLVITSLVGSRGLEESTLVAVAQVKPGQGIMAGFGIAVLAIVLDRLLRGASDKLSNSFQPSRT
>NZ_CP049037.1|WP_165193403.1|1362432_1364094_+|choline-dehydrogenase
MIPEKRTYDFVIVGSGSAGGVLASRLTEDADCTVLLIEAGTARRSLTVDVPGLLFMNFERAKYNWRFDTTKQKELGGREVYQPRGKGLGGSSSINAMVYMRGHAEDFDGWERLGAKGWNYASVLPYFKKSEAFKNNGDPTYRGGNGPVKTQRSRAWAPVQDAFMQAGKERGYPETDDVNGFQQEGFSMFDMNIGDGVRNGTAKAFIRPAMKRPNLEVATDTYCAKVVMEGSTAKGVALSTKGKSWTATAKREVILCAGAAKTPQILMLSGIGPADHLAEHDIPVVVDLKGVGENLQDHAEIHLKYAATKPVAYNKFLRPDRAIRVALQWLFTRDGVAATNGFECGAFFRSSENVPYPDQLIHYYPVHLNGWMPAFGKHGFTLGLNYMRCNSVGTVKLKSPDPKDTPRIDPNYMSDPDDMDRMVSFLDLGRDLAAASAFDDFRGAELEPGPEVQTRVQKEMWIRDNLASAYHLSCTCKMGTDEMAVTGPDGKVHGTEGLRVVDASIMPMVTNGNLNAPTMMMAERISDMIRGRPLLPPEKVPVAKPIKGAASQY
>NZ_CP049037.1|WP_165193405.1|1364150_1365317_+|aldehyde-dehydrogenase
MPNPVETYFDTWNVPDDLRKLASRDIPHWINGKAVVSGETIDVVEPSTSTVISRTFEAGKEHVNAAIKAARQAFEGDWSNLRPLDRQALMLRLADLIEANADELAFLESVDVGKSVVQAKEIDIGGSVDVLRHFAGYCTRIEGRTAPLAAYEKGSVGMTIKRPVGVVAAIAPWNFPLQTLIWKCAAAFATGCVVVAKPSEVTPMTALRLGELTAEARFPPGVFNVVNGTGAITGAALTSHPDVDKISFTGSTGTGIAVGQVGLASMTRLTLELGGKSAAIVTADADLDVAVEGVVNGIFFNSGQVCDGTSRVVVDGAVYEDFMMRLVKATQGLKMGAGLDPDTFMGPMVSIDHKAKVAGFIAAAQEAGLALPVQHTSRRTHGGLGAFQ

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Crispr_ID: NZ_CP049037_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049037_3

1784338-1784406

Orphan

Consensus_repeat	Method
TGCCGGGCTGAAGCCCGGCCTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049037_3

>merge|NZ_CP049037|3|1784338-1784406|CRISPRCasFinder
GGCCGGGCTTCAGCCCGGCACACCCTGCGAACAGTCCTCTCCAAATGCCGGGCTGAAGCCCGGCCTACG

>NZ_CP049037|3|2|1784338-1784406|CRISPRCasFinder
GGCCGGGCTTCAGCCCGGCACAC	CCTGCGAACAGTCCTCTCCAAA
TGCCGGGCTGAAGCCCGGCCTACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049037.1\|WP_165194070.1\|1786884_1787091_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP049037.1\|WP_165194067.1\|1785034_1785376_-\|BrnA-antitoxin-family-protein	unknown	unknown	gnl\|CDD\|373040
NZ_CP049037.1\|WP_165194074.1\|1787861_1788548_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP049037.1\|WP_165194079.1\|1794181_1794541_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP049037.1\|WP_165194072.1\|1787152_1787863_-\|arylesterase	unknown	unknown	gnl\|CDD\|238860
NZ_CP049037.1\|WP_165194050.1\|1771502_1773350_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP049037.1\|WP_165194077.1\|1791189_1794039_-\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP049037.1\|WP_165194056.1\|1776000_1776216_+\|transposase-family-protein	unknown	unknown	gnl\|CDD\|366234
NZ_CP049037.1\|WP_165194048.1\|1770931_1771324_+\|response-regulator	unknown	unknown	gnl\|CDD\|381104
NZ_CP049037.1\|WP_165194080.1\|1794560_1795685_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|237435
NZ_CP049037.1\|WP_165194082.1\|1796046_1796514_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP049037.1\|WP_165194059.1\|1778160_1779684_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|334815
NZ_CP049037.1\|WP_165194075.1\|1788544_1791064_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|225669
NZ_CP049037.1\|WP_165194063.1\|1782553_1784209_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_CP049037.1\|WP_165194062.1\|1780690_1782454_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP049037.1\|WP_165194060.1\|1779882_1780500_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP049037.1\|WP_165194054.1\|1774886_1775993_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224978
NZ_CP049037.1\|WP_165194052.1\|1773727_1774771_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|377531
NZ_CP049037.1\|WP_165194069.1\|1785544_1786693_+\|geranylgeranyl-reductase-family-protein	unknown	unknown	gnl\|CDD\|223717
NZ_CP049037.1\|WP_165194058.1\|1776777_1777512_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP049037.1\|WP_165194070.1\|1786884_1787091_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.76673e-31
NZ_CP049037.1\|WP_165194072.1\|1787152_1787863_-\|arylesterase	gnl\|CDD\|238860	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.	5.33466e-75
NZ_CP049037.1\|WP_165194074.1\|1787861_1788548_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	3.74568e-102
NZ_CP049037.1\|WP_165194079.1\|1794181_1794541_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	6.50162e-59
NZ_CP049037.1\|WP_165194050.1\|1771502_1773350_+\|PAS-domain-S-box-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.31988e-49
NZ_CP049037.1\|WP_165194077.1\|1791189_1794039_-\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP049037.1\|WP_165194056.1\|1776000_1776216_+\|transposase-family-protein	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	0.00035576
NZ_CP049037.1\|WP_165194048.1\|1770931_1771324_+\|response-regulator	gnl\|CDD\|381104	cd17552, REC_RR468-like, phosphoacceptor receiver (REC) domain of Thermotoga maritima response regulator RR468 and similar domains. Thermotoga maritima RR468 (encoded by gene TM0468) is the cognate response regulator (RR) of the class I histidine kinase HK853 (product of gene TM0853). HK853/RR468 comprise a two-component system (TCS) that couples environmental stimuli to adaptive responses. This subfamily also includes Fremyella diplosiphon complementary adaptation response regulator homolog RcaF, a small RR that is involved in four-step phosphorelays of the complementary chromatic adaptation (CCA) system that occurs in many cyanobacteria. Both RR468 and RcaF are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.41596e-41
NZ_CP049037.1\|WP_165194080.1\|1794560_1795685_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|237435	PRK13579, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP049037.1\|WP_165194082.1\|1796046_1796514_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	3.57745e-36
NZ_CP049037.1\|WP_165194059.1\|1778160_1779684_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|334815	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family.	9.74564e-49
NZ_CP049037.1\|WP_165194075.1\|1788544_1791064_+\|FtsX-like-permease-family-protein	gnl\|CDD\|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP049037.1\|WP_165194063.1\|1782553_1784209_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP049037.1\|WP_165194062.1\|1780690_1782454_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.54356e-81
NZ_CP049037.1\|WP_165194060.1\|1779882_1780500_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	5.48242e-69
NZ_CP049037.1\|WP_165194054.1\|1774886_1775993_+\|hypothetical-protein	gnl\|CDD\|224978	COG2067, FadL, Long-chain fatty acid transport protein [Lipid metabolism].	5.62783e-29
NZ_CP049037.1\|WP_165194052.1\|1773727_1774771_-\|IS5-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	4.11692e-21
NZ_CP049037.1\|WP_165194069.1\|1785544_1786693_+\|geranylgeranyl-reductase-family-protein	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	2.70402e-48
NZ_CP049037.1\|WP_165194067.1\|1785034_1785376_-\|BrnA-antitoxin-family-protein	gnl\|CDD\|373040	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system. BrnA is family of antitoxins that neutralizes the toxin BrnT, pfam04365. It consists of 3 alpha-helices and a C-terminal ribbon-helix-helix DNA binding domain. As in other toxin-antitoxin systems, BrnA negatively autoregulates the brnTA operon and has higher affinity for the DNA operator when complexed with BrnT. It dimerizes with two molecules of its toxin BrnT.	8.46554e-09

>NZ_CP049037.1|WP_165194063.1|1782553_1784209_+|energy-dependent-translational-throttle-protein-EttA
MAAYQYVYHMQGVSKTYPGGKKCFENIHLSFLPGVKIGVVGVNGSGKSTLMKIMTGLDTDFTGEAWAAEGATVGYLPQEPHLDEALTVRENVMLGVAGKKAKLDRFNELAMNYSDETADEMAELQDQIDAENLWDLDAQIDVSMEALRCPADDAAVASLSGGERRRVALCKLLLEAPDMLLLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDDITSWILELDRGRGIPYEGNYSAWLEQKAKRLSQEAREDKSKQKTLERELDWMRQGQKARQAKSKARINAYNEMAGQSEREKLTRAQIVIPNGPRLGDKVIEVTGLKKAMGDKLLIEDLSFSLPPGGIVGVIGPNGAGKSTLFKMLTGQEQPDAGTIEYGDTVDLSYVDQSRDDLNADENVWEAIADGQDIIKLGDAEVNARAYCSAFNFKGGDQQKKVSLLSGGERNRVHMARLLRSGGNVLLLDEPTNDLDVETLRALEDALVDFAGCAVVISHDRFFLDRICTHMLAFEGDAHVEWFEGNFEDYEEDKKRRLGADALEPTRMKHKKFAR
>NZ_CP049037.1|WP_165194062.1|1780690_1782454_+|EAL-domain-containing-protein
MPDLILDHVRDGIILLDINGRVKWMNPACETMLGWALSDIRGTNPQDLILPPEHRSTRKQTENFRYDFSTSLFDGYRITQHLRRDGSRFWNQQSHSLINLGPDDSQKMVVVTCRDVSDQVTTQAALHQVKDDLEHAAYHDDLTNLANRKRLSQYMHSNRVTAQIAAGRIGLLQLDLDKFKEINDTLGHAAGDMVLCHVADGLRQHARPDDLICRNGGDEFLLFCAETSNRTMLMARAEQVMRTINHPLVWKDQTITIGISIGAALSTSGTTSGEALIQQADHALYSAKDAGRGQVVYYTDQLGQRYRARQQLNRDLKQAVEQDQFTIFLQPMLDLAGNRITGCEALLRWKHPHRGLLAPASFLSAAEAIQLLPDIDYLSMNHALDALTQMRQAGFSDLTLSLNVSSTILSDVNYPDLLDWALQSRNLPHSSICVEILETSLLDVNNIRVMAAVAQLRRIGVRVALDDFGTGYAGLSHISTIEVDAIKLDHSMISRLESAPRHRVVTRSIIRLCALLGMDVVAEGVETQGQLDILRRAKCPFIQGFGLARPMPVPDMIDWLRTNTPLPAPLVLDAPVPTSAAPHKARQ
>NZ_CP049037.1|WP_165194060.1|1779882_1780500_-|nicotinate-nucleotide-adenylyltransferase
MPALTLPLSRPGQTIGLLGGSFDPPHAGHAHITREALKRFGLDAVWWLVSPGNPLKAHGPAPMAQRMEASAQVMQHPRVFISDAEAQIGSRYTAQTLRILRAARPGVRFVWLMGADNLAQFDQWQDWQEIMETVPVGVLARPDARTAARGSKAARIYAACRLPGRQSQRLARLQAPVWCFVNVPMLAISSTALRASGVWAAASDG
>NZ_CP049037.1|WP_165194059.1|1778160_1779684_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MMLPFSRRAFLTGSISALASGAGVRAAWAGAPAVSLRPQLRPDDLATTARKPRPKAPDAQTLIDRAKLGGKVGYAVVDVKTGALLETRNADTGFAPASVTKAVTALYALDALGPGYRFRTQLIATGPIENGVIKGDLVLAGGGDPTLDTDALAGMAANLKGAGIRAVTGAFRVFDGALPYVRVIDETQPDHVGYNPSLSGLNLNFNRVHFQWARGADGYTVTMDARSAKYRPAVRVARMRIANRAAPVYTYTDAGDHDEWTVASQALGKGGTRWLPVRYPASYAGEVFATFARSHGIKLDSAKPQGGAPRGTALVTHNSVALSTILRGMLKYSNNLTAELVGMTATVARRGKVTTLAASGREMSAWARTELGMKDASLVDHSGLGSESRLSAESLARAMAKVAGQGALAPLLKPFVMRHENGQIDKGHPVEVLAKTGTLYFVSSLSGYATGPGGRQLAFAILTGNQAKRRGLAKSAQERPPGSAAWNARSKRLQQQLIERWNAVYGS
>NZ_CP049037.1|WP_165194058.1|1776777_1777512_+|hypothetical-protein
MSLSDKTPDHHVAYGAAIDGFSAASASLAVVGRYWWNLQMRLLVATGTMRFFKAQWWLFLIVGFLLLAFVMPLGVAFVVSSFCAGEMDPKAKDNFIVPLRRGALTATAHTNDELGEGAASVSQSDTLEDARLAAGLHHVGYLRAIGREVDDNEFAAAALGAFDGTVQAFGLKLSDLDMHTMGAAFIVGQLKNLGRMNQVDPEWIAEVTIEAMSSEKLNATRLEAGRMAYAMEGAMQDGPAQHTS
>NZ_CP049037.1|WP_165194056.1|1776000_1776216_+|transposase-family-protein
MPVIKQFETDSISALVAIMDCSSSRILSWRISNTLVIDFCSEALNEAIRKFVPPEIVNTDSRKMVTSTRLA
>NZ_CP049037.1|WP_165194054.1|1774886_1775993_+|hypothetical-protein
MKSSMLTASFALALTLNPAYAGNLDRTKTPIDIIFEQGSYAELSFGFAMPSVTGVDSLGNAISNVGADISAIGAGLKLQLSDHFSLAIIYDQPYGVDLEYGGNPATTLLGGTMAKAESDELKILFRYGITDRIAVYGGPRIVGADGNITLSGLAYGGLNGYNARFSSDQGLGYVLGAAYEIPEIAFRAALTYHSEVELNMQTTETFPGGAPAATGSTKSTLPQSVKLQVQSGVAQNTLLFGSIRWSEWSVFTLNPPSPAPNLASMVDAWTYEIGIGYRFSDKFSASVTYSYEDEEGNNLVSPLAPNFGNQSLTLGGKYQVTDQLSLAGGVKYTWLGDAFPVTNPPNTPRASFSNNDAISVGVKMGMSF
>NZ_CP049037.1|WP_165194052.1|1773727_1774771_-|IS5-family-transposase
MTQMGFFDLSDRYASLDAKKDPLVEIDAVVPWEEFRPTLERVWRKPDAERKSRAGRKPMDAVLMFKTLVLSALYNLSDDQIEYQVRDRLSFMRFLGLGLQDRVPDAKTVWLYREALAQAGMVEALFNQFDDYLSRQGYIARGGQILDASIVPVPRNHNTRDENKAIKNGEVPEDWADKPAKRSQKDVDARWTKKHGKSHYGYKNHVNVDRKHKLVRRYHVSDAALHDSQAVDHLLTRNNTGAGVWADPAYRSEEIETKLRALKLKSHIHRKGRRGKPLTEQAKGSNRTKSAVRARVEHVFGAQANDMGGKLVRTIGMVRAKAKIGMTNLAYNMRRLGQLRRLSPCPA
>NZ_CP049037.1|WP_165194050.1|1771502_1773350_+|PAS-domain-S-box-protein
MVTDTHKQKSADSAIIHAFKHMQVPLMIVEPSGTILHSNRAAGQLFGYSDDNLSKQMIFDVLPVDSVKELNAYIPPGDFDAIIKGIIGRRQDGASVLLAIHLTAWTDENGAIQHALVLRDIAEEMEADRVRKAEMKRADSAIKGARIGVFEFDVKTQSVLVSDLWRELMGLEQTPTKELRMAWMARIHPADLEIAMEPIRRCVDEGHERASSEYRLRSTDGESWRWMRTDLAIAKRDKSGETSCVVGAATDITERKAVESTYHRIAEQFRSSFEAATIGKALVGVDGQFLKVNRSLCELLGYSEDDLCKMDFQSITHPEDLELDLNQFDLLKRGKIPSYKREKRYIRSDGTVLWGLLSVGMITDAEGQPEHFVSQIVDITDQRRLNELKSEFVATVSHELRTPLTSLLGSLTLFSAMEGANLSDGAQRLVSIAEENGKRLSSLINDILDFEKFSARQMSINAAQHEVASLIDDAVLANLPFAEQFGVNFNVTCRERNLAGFFDPKRFQQVLSNFLSNAAKFADEGSTIDILVEAEKHNIRVSVSNQGAGIPESFKDKVFLPFTQAAPVAKRRRGGTGLGLSITKQIVEQMGGDIGFKSNDGEPTTFWFTLPQNMT
>NZ_CP049037.1|WP_165194048.1|1770931_1771324_+|response-regulator
MIEILHVEDDADIREIALIALSLSGEFRVVQCPSGEDAVRQAQGYTPDVLLLDVMMPGMNGPETLGHLRKIPAMIDVPVVFMTARAQQSDVDQLLSLGAAHVISKPFDPLLLGEQVKGIIQEHTPWKIAV
>NZ_CP049037.1|WP_165194067.1|1785034_1785376_-|BrnA-antitoxin-family-protein
MTRMTKTERIAREGLMKNLIQLMRDDWIPLRIETEIPDAWHTLEADVDVTEPKEKVTLYLDRSVARYYRAMGQGYQARINRLLATWAQMHIAREVKLEKMLNARLARNNETDC
>NZ_CP049037.1|WP_165194069.1|1785544_1786693_+|geranylgeranyl-reductase-family-protein
MPTFDLIILGAGPAGSAAAVTARQAGLSVAVIDKAVFPRAKLCGGFFTGRAEGYYRDIFQRPLDPQMFQPREKIAFYLDGTPLGDASDTLPLYLTMRWDMDAHLFDLAVQAGAADFSGHRVAALDLAARSVVLDGGTTLWYQSLIGADGVQSMVARALFGQSFDKTKIGFALEVEAPPQAENAVVRIDFDAASWGYGWQFPKRASTTIGIGGLQSQNSDIQARLATYRARLGDDSPARVKGHFLPFGNYRRVPGRGAVLLAGDAAGFVDPITGEGIAYALQSGHMAAIAAANAIRTGQPDSAMRHYARLVRPIQRSLRLACFLRPLIFASRLRPFFRRAFANSTTVKHAYLSMLSGKVEYPQLMRLTARRLPGALWRSLRRP
>NZ_CP049037.1|WP_165194070.1|1786884_1787091_+|cold-shock-protein
MANGTVKWFNSTKGFGFIAPETGGKDVFVHISAVERAGLTGLADDQKVTFDVEAGRDGRESATNIALA
>NZ_CP049037.1|WP_165194072.1|1787152_1787863_-|arylesterase
MRTRLFVKVFLTYGLCGLRGKALAAFLLLAVTFVGPTARPVYAEDPVTVLALGDSLTQGYGLVQADGFVPQLGQWLTQQGTAARLINGGVSGDTTQGGAARAAWSLTDDVDAMIVALGGNDLLRGIDPTVSRANLETILKVAEQKDVPVLLIGLRAPRNYGPEYKTAFDAIYPELAETHDALYLESFFAGIEAQGGGTQQKYFQADGIHPNKAGVALIVEGIGPSVVALIERAGQK
>NZ_CP049037.1|WP_165194074.1|1787861_1788548_+|ABC-transporter-ATP-binding-protein
MPHPPLSLSGAALSLRSNAGLVEILHGITLEVQSGETLGLVGPSGSGKSSLLMLMGGLERATSGTVTALGHDLSVMSEDALARLRRDHFGVIFQSFHLIPTMTALENVATPLELAGRADAFERARAELAAVGLAGRADHYPSQLSGGEQQRVALARAAAPQPDIVLADEPTGNLDGSTGATIIDLLFDLRDRHGTTLVLVTHDADLAARCDRVISLRDGRIDNTANAA
>NZ_CP049037.1|WP_165194075.1|1788544_1791064_+|FtsX-like-permease-family-protein
MRIALAARLARRELRGGLAGFRILLACIILGVAAIAAVGTIRESITAGLARDGAALLGGDAEIALTYRFATQAEKAWMERNADRISEIVDFRSLARGPDDARALTQVKAVDNAYPLIGNVELDPQIPLSNALRGQDGLPGGVMAPALIAQLGLTIGDSFRLGTQDFRLMAALVDEPDTAMSGFGLGPRTIVATPALQASGLLAPGTLFSARYRLVLPTGTDLATVQSDAETSFASSGLSWRDARNGAPGVAKFVQRLGAFLVLVGLSGLAVGGVGISAAIRAYLARKTGVIATLRTLGAERGVIFASYLLQIGVLAVLGIAMGVLLGAGLPVLLSPLLNARLPVPAVFAFYPAPMIEAAVYGTFTALLFTLWPLARVLDIRAASLFRGDEAHHRTLPSWPFLMVTALLLGGLLYAAVWFSGNLRLTLWTAGGIIGALFLLSVSAQGVRVLAQAMRPAARGRPPLRWALASIGGPGTTAGPVVLSLGLGLSVLAAVGQIDGNLRGAIQGDLHERAPSFFFVDLQKDQMEGFRARLDRDPGVTRIDSAPMLRGIISQINGRPAAEVAGDHWVLRGDRGLTYSAAPPPRARLTAGEWWPSDYSGPPQISFAAEEAAEMGLALGDTITVNILGRDITAEITSLREVDFSTAGIGFIMSMNPAALQGAPHSFISTVYADASSDTAILRDIASTYPNVTAISVRDAVDRVAALLAGLAAATSWGAAATLLTGFLVLIGAAAADQGARVFEAAVLKVLGASRGRILLSLALRAALLGAAAGIVAIGAGILGGWAVSYYVMETDFAVIWPSALIIVAGGIGVTLLAALGFALRPLAARPAQVLRSRE
>NZ_CP049037.1|WP_165194077.1|1791189_1794039_-|aminomethyl-transferring-glycine-dehydrogenase
MAFEPIDYLPYDFANRRHIGPSPDEMAAMLEVLGVDSLDTLIDQTVPKSIRQEKPLDFGKAKSERELLHHMRVTASKNKVLTSLIGQGYHGTVTPPAIQRNIFENPAWYTAYTPYQPEISQGRLEALLNFQTMVSDLTGLEIANASLLDESTACAEAMTMAQRVAKSKKTAFFVDRDCHPQNIAVIQTRAAPLGIEVIVGNPDKMDASAVFGAIFQYPGTYGHVRDYTDHIARLHEADAIGIVSADPLSLTLLKEPGAMNADIAVGSTQRFGIPLGYGGPHAAYMACRDAYKRAMPGRIVGVSIDAHGNRAYRLSLQTREQHIRREKATSNVCTAQALLAVMASMYAVFHGPKGLKAIAQRIHRKTVRMAKGLEKAGFKVDPQSFFDTITVDVGPLQAAVMKSAVDEKINLRKVGETRVGITFDECTRPENVEAVWRAFGITEKDDKFEPEYRVPENMHRKTEYLTHPIFHMNRAETEMMRYMRRLADRDLALDRAMIPLGSCTMKLNAAAEMMPVSWREFSRLHPFVPADQAEGYAELIADLSAKLCDITGYAAISMQPNSGAQGEYAGLLTIAAYHRAQDEGHRNVCLIPVSAHGTNPASAQMVGWKVVVVKSAENGDIDVDDFRAKAEKHAENLAACMITYPSTHGVFEETVRDVCKITHEHGGQVYIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKSHLVEHLPGHPSTGGVQGPVSAAPFGSPSLLPISWAYCLMMGGEGLTQATRVAILNANYIAKRLEGAYDVLYRGSEGRVAHECIIDTRPYADSAHVTVDDIAKRLVDCGFHAPTMSWPVSGTLMIEPTESETKAELDRFCDAMLAIREEIRAIEEGKIDAENNPLKNAPHTMEDLVTDWDRPYSREQGCFPPGAFRVDKYWPPVNRVDNVHGDRHLICTCPPLEDYAEAAE
>NZ_CP049037.1|WP_165194079.1|1794181_1794541_-|glycine-cleavage-system-protein-GcvH
MKFTEEHEWLRVEDDVVVVGITEHAAEQLGDIVFVELPSVGTEVVKDDEVVVIESVKAASDILAPIDGEITEVNDVLTDEPSKVNDDAMGDGWMFKMKASDATQMDDYMDEAAYKKFVG
>NZ_CP049037.1|WP_165194080.1|1794560_1795685_-|glycine-cleavage-system-aminomethyltransferase-GcvT
MSDLRVTPLNALHKELGAKMVPFAGYEMPVQYPLGVMKEHLHCRAEAGLFDVSHMGQVIIRAPGGYDAAATAFETLVPVNALGLGEGRQRYAMFTNDKGGIEDDLMIANRGDHMFVVVNAACKEADITRMTTGLPECEVTEITDRALLALQGPGAEAALEALVPGVASMTFMDVGVMASDWGELWISRSGYTGEDGYEISVPEDQSEALARALIALDAVEPIGLGARDSLRLEAGLCLYGHDIDSGTTPVEAALTWAIQKVRRNGGARAGGFPGADTILAQLDDGPTRRRVGLRPEGRAPMREGTELYAGAEGGDVIGHVTSGAFGPTLGGPMSMGYVTAGFADDGTTIYGDVRGKRLPATITALPFVPANFKR
>NZ_CP049037.1|WP_165194082.1|1796046_1796514_-|Rrf2-family-transcriptional-regulator
MRITKRSNIAMRVLMFCAVQPEKLVTKAEVAARCNASESHLAQIIHQMAQLGYLETQRGRNGGVMLGRPAREIIIGDVFRDIEAEFTASECFADVDNTCPLTSACRLRWAIGAAAEAFFAYLDTITLDTLVCDNFALERILLPTGCGAVARAVPG

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Crispr_ID: NZ_CP049037_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049037_4

1784587-1784724

Orphan

Consensus_repeat	Method
TGCCGGGCTGAAGCCCGGCCTAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP049037_4

>merge|NZ_CP049037|4|1784587-1784724|CRISPRCasFinder
GGCCGGGCTTCAGCCCGGCATATCTGCCGGATGACACGACGGGCAATTCGACTGCCGGGCTGAAGCCCGGCCTACGGTTGGCATTTCTTCCCGGCGTCACGCCCGGAAATCCGGTCGCCGGGCTGAAGCCCGGCCTAC

>NZ_CP049037|4|3|1784587-1784724|CRISPRCasFinder
GGCCGGGCTTCAGCCCGGCATAT	CTGCCGGATGACACGACGGGCAATTCGAC
TGCCGGGCTGAAGCCCGGCCTAC	GGTTGGCATTTCTTCCCGGCGTCACGCCCGGAAATCCGGT
CGCCGGGCTGAAGCCCGGCCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049037.1\|WP_165194070.1\|1786884_1787091_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP049037.1\|WP_165194067.1\|1785034_1785376_-\|BrnA-antitoxin-family-protein	unknown	unknown	gnl\|CDD\|373040
NZ_CP049037.1\|WP_165194074.1\|1787861_1788548_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP049037.1\|WP_165194079.1\|1794181_1794541_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP049037.1\|WP_165194072.1\|1787152_1787863_-\|arylesterase	unknown	unknown	gnl\|CDD\|238860
NZ_CP049037.1\|WP_165194050.1\|1771502_1773350_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP049037.1\|WP_165194077.1\|1791189_1794039_-\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP049037.1\|WP_165194056.1\|1776000_1776216_+\|transposase-family-protein	unknown	unknown	gnl\|CDD\|366234
NZ_CP049037.1\|WP_165194048.1\|1770931_1771324_+\|response-regulator	unknown	unknown	gnl\|CDD\|381104
NZ_CP049037.1\|WP_165194080.1\|1794560_1795685_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|237435
NZ_CP049037.1\|WP_165194082.1\|1796046_1796514_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP049037.1\|WP_165194059.1\|1778160_1779684_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|334815
NZ_CP049037.1\|WP_165194075.1\|1788544_1791064_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|225669
NZ_CP049037.1\|WP_165194063.1\|1782553_1784209_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_CP049037.1\|WP_165194062.1\|1780690_1782454_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP049037.1\|WP_165194060.1\|1779882_1780500_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP049037.1\|WP_165194054.1\|1774886_1775993_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224978
NZ_CP049037.1\|WP_165194052.1\|1773727_1774771_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|377531
NZ_CP049037.1\|WP_165194069.1\|1785544_1786693_+\|geranylgeranyl-reductase-family-protein	unknown	unknown	gnl\|CDD\|223717
NZ_CP049037.1\|WP_165194058.1\|1776777_1777512_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP049037.1\|WP_165194070.1\|1786884_1787091_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.76673e-31
NZ_CP049037.1\|WP_165194072.1\|1787152_1787863_-\|arylesterase	gnl\|CDD\|238860	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.	5.33466e-75
NZ_CP049037.1\|WP_165194074.1\|1787861_1788548_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	3.74568e-102
NZ_CP049037.1\|WP_165194079.1\|1794181_1794541_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	6.50162e-59
NZ_CP049037.1\|WP_165194050.1\|1771502_1773350_+\|PAS-domain-S-box-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.31988e-49
NZ_CP049037.1\|WP_165194077.1\|1791189_1794039_-\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP049037.1\|WP_165194056.1\|1776000_1776216_+\|transposase-family-protein	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	0.00035576
NZ_CP049037.1\|WP_165194048.1\|1770931_1771324_+\|response-regulator	gnl\|CDD\|381104	cd17552, REC_RR468-like, phosphoacceptor receiver (REC) domain of Thermotoga maritima response regulator RR468 and similar domains. Thermotoga maritima RR468 (encoded by gene TM0468) is the cognate response regulator (RR) of the class I histidine kinase HK853 (product of gene TM0853). HK853/RR468 comprise a two-component system (TCS) that couples environmental stimuli to adaptive responses. This subfamily also includes Fremyella diplosiphon complementary adaptation response regulator homolog RcaF, a small RR that is involved in four-step phosphorelays of the complementary chromatic adaptation (CCA) system that occurs in many cyanobacteria. Both RR468 and RcaF are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.41596e-41
NZ_CP049037.1\|WP_165194080.1\|1794560_1795685_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|237435	PRK13579, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP049037.1\|WP_165194082.1\|1796046_1796514_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	3.57745e-36
NZ_CP049037.1\|WP_165194059.1\|1778160_1779684_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|334815	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family.	9.74564e-49
NZ_CP049037.1\|WP_165194075.1\|1788544_1791064_+\|FtsX-like-permease-family-protein	gnl\|CDD\|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP049037.1\|WP_165194063.1\|1782553_1784209_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP049037.1\|WP_165194062.1\|1780690_1782454_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.54356e-81
NZ_CP049037.1\|WP_165194060.1\|1779882_1780500_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	5.48242e-69
NZ_CP049037.1\|WP_165194054.1\|1774886_1775993_+\|hypothetical-protein	gnl\|CDD\|224978	COG2067, FadL, Long-chain fatty acid transport protein [Lipid metabolism].	5.62783e-29
NZ_CP049037.1\|WP_165194052.1\|1773727_1774771_-\|IS5-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	4.11692e-21
NZ_CP049037.1\|WP_165194069.1\|1785544_1786693_+\|geranylgeranyl-reductase-family-protein	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	2.70402e-48
NZ_CP049037.1\|WP_165194067.1\|1785034_1785376_-\|BrnA-antitoxin-family-protein	gnl\|CDD\|373040	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system. BrnA is family of antitoxins that neutralizes the toxin BrnT, pfam04365. It consists of 3 alpha-helices and a C-terminal ribbon-helix-helix DNA binding domain. As in other toxin-antitoxin systems, BrnA negatively autoregulates the brnTA operon and has higher affinity for the DNA operator when complexed with BrnT. It dimerizes with two molecules of its toxin BrnT.	8.46554e-09

>NZ_CP049037.1|WP_165194063.1|1782553_1784209_+|energy-dependent-translational-throttle-protein-EttA
MAAYQYVYHMQGVSKTYPGGKKCFENIHLSFLPGVKIGVVGVNGSGKSTLMKIMTGLDTDFTGEAWAAEGATVGYLPQEPHLDEALTVRENVMLGVAGKKAKLDRFNELAMNYSDETADEMAELQDQIDAENLWDLDAQIDVSMEALRCPADDAAVASLSGGERRRVALCKLLLEAPDMLLLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDDITSWILELDRGRGIPYEGNYSAWLEQKAKRLSQEAREDKSKQKTLERELDWMRQGQKARQAKSKARINAYNEMAGQSEREKLTRAQIVIPNGPRLGDKVIEVTGLKKAMGDKLLIEDLSFSLPPGGIVGVIGPNGAGKSTLFKMLTGQEQPDAGTIEYGDTVDLSYVDQSRDDLNADENVWEAIADGQDIIKLGDAEVNARAYCSAFNFKGGDQQKKVSLLSGGERNRVHMARLLRSGGNVLLLDEPTNDLDVETLRALEDALVDFAGCAVVISHDRFFLDRICTHMLAFEGDAHVEWFEGNFEDYEEDKKRRLGADALEPTRMKHKKFAR
>NZ_CP049037.1|WP_165194062.1|1780690_1782454_+|EAL-domain-containing-protein
MPDLILDHVRDGIILLDINGRVKWMNPACETMLGWALSDIRGTNPQDLILPPEHRSTRKQTENFRYDFSTSLFDGYRITQHLRRDGSRFWNQQSHSLINLGPDDSQKMVVVTCRDVSDQVTTQAALHQVKDDLEHAAYHDDLTNLANRKRLSQYMHSNRVTAQIAAGRIGLLQLDLDKFKEINDTLGHAAGDMVLCHVADGLRQHARPDDLICRNGGDEFLLFCAETSNRTMLMARAEQVMRTINHPLVWKDQTITIGISIGAALSTSGTTSGEALIQQADHALYSAKDAGRGQVVYYTDQLGQRYRARQQLNRDLKQAVEQDQFTIFLQPMLDLAGNRITGCEALLRWKHPHRGLLAPASFLSAAEAIQLLPDIDYLSMNHALDALTQMRQAGFSDLTLSLNVSSTILSDVNYPDLLDWALQSRNLPHSSICVEILETSLLDVNNIRVMAAVAQLRRIGVRVALDDFGTGYAGLSHISTIEVDAIKLDHSMISRLESAPRHRVVTRSIIRLCALLGMDVVAEGVETQGQLDILRRAKCPFIQGFGLARPMPVPDMIDWLRTNTPLPAPLVLDAPVPTSAAPHKARQ
>NZ_CP049037.1|WP_165194060.1|1779882_1780500_-|nicotinate-nucleotide-adenylyltransferase
MPALTLPLSRPGQTIGLLGGSFDPPHAGHAHITREALKRFGLDAVWWLVSPGNPLKAHGPAPMAQRMEASAQVMQHPRVFISDAEAQIGSRYTAQTLRILRAARPGVRFVWLMGADNLAQFDQWQDWQEIMETVPVGVLARPDARTAARGSKAARIYAACRLPGRQSQRLARLQAPVWCFVNVPMLAISSTALRASGVWAAASDG
>NZ_CP049037.1|WP_165194059.1|1778160_1779684_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MMLPFSRRAFLTGSISALASGAGVRAAWAGAPAVSLRPQLRPDDLATTARKPRPKAPDAQTLIDRAKLGGKVGYAVVDVKTGALLETRNADTGFAPASVTKAVTALYALDALGPGYRFRTQLIATGPIENGVIKGDLVLAGGGDPTLDTDALAGMAANLKGAGIRAVTGAFRVFDGALPYVRVIDETQPDHVGYNPSLSGLNLNFNRVHFQWARGADGYTVTMDARSAKYRPAVRVARMRIANRAAPVYTYTDAGDHDEWTVASQALGKGGTRWLPVRYPASYAGEVFATFARSHGIKLDSAKPQGGAPRGTALVTHNSVALSTILRGMLKYSNNLTAELVGMTATVARRGKVTTLAASGREMSAWARTELGMKDASLVDHSGLGSESRLSAESLARAMAKVAGQGALAPLLKPFVMRHENGQIDKGHPVEVLAKTGTLYFVSSLSGYATGPGGRQLAFAILTGNQAKRRGLAKSAQERPPGSAAWNARSKRLQQQLIERWNAVYGS
>NZ_CP049037.1|WP_165194058.1|1776777_1777512_+|hypothetical-protein
MSLSDKTPDHHVAYGAAIDGFSAASASLAVVGRYWWNLQMRLLVATGTMRFFKAQWWLFLIVGFLLLAFVMPLGVAFVVSSFCAGEMDPKAKDNFIVPLRRGALTATAHTNDELGEGAASVSQSDTLEDARLAAGLHHVGYLRAIGREVDDNEFAAAALGAFDGTVQAFGLKLSDLDMHTMGAAFIVGQLKNLGRMNQVDPEWIAEVTIEAMSSEKLNATRLEAGRMAYAMEGAMQDGPAQHTS
>NZ_CP049037.1|WP_165194056.1|1776000_1776216_+|transposase-family-protein
MPVIKQFETDSISALVAIMDCSSSRILSWRISNTLVIDFCSEALNEAIRKFVPPEIVNTDSRKMVTSTRLA
>NZ_CP049037.1|WP_165194054.1|1774886_1775993_+|hypothetical-protein
MKSSMLTASFALALTLNPAYAGNLDRTKTPIDIIFEQGSYAELSFGFAMPSVTGVDSLGNAISNVGADISAIGAGLKLQLSDHFSLAIIYDQPYGVDLEYGGNPATTLLGGTMAKAESDELKILFRYGITDRIAVYGGPRIVGADGNITLSGLAYGGLNGYNARFSSDQGLGYVLGAAYEIPEIAFRAALTYHSEVELNMQTTETFPGGAPAATGSTKSTLPQSVKLQVQSGVAQNTLLFGSIRWSEWSVFTLNPPSPAPNLASMVDAWTYEIGIGYRFSDKFSASVTYSYEDEEGNNLVSPLAPNFGNQSLTLGGKYQVTDQLSLAGGVKYTWLGDAFPVTNPPNTPRASFSNNDAISVGVKMGMSF
>NZ_CP049037.1|WP_165194052.1|1773727_1774771_-|IS5-family-transposase
MTQMGFFDLSDRYASLDAKKDPLVEIDAVVPWEEFRPTLERVWRKPDAERKSRAGRKPMDAVLMFKTLVLSALYNLSDDQIEYQVRDRLSFMRFLGLGLQDRVPDAKTVWLYREALAQAGMVEALFNQFDDYLSRQGYIARGGQILDASIVPVPRNHNTRDENKAIKNGEVPEDWADKPAKRSQKDVDARWTKKHGKSHYGYKNHVNVDRKHKLVRRYHVSDAALHDSQAVDHLLTRNNTGAGVWADPAYRSEEIETKLRALKLKSHIHRKGRRGKPLTEQAKGSNRTKSAVRARVEHVFGAQANDMGGKLVRTIGMVRAKAKIGMTNLAYNMRRLGQLRRLSPCPA
>NZ_CP049037.1|WP_165194050.1|1771502_1773350_+|PAS-domain-S-box-protein
MVTDTHKQKSADSAIIHAFKHMQVPLMIVEPSGTILHSNRAAGQLFGYSDDNLSKQMIFDVLPVDSVKELNAYIPPGDFDAIIKGIIGRRQDGASVLLAIHLTAWTDENGAIQHALVLRDIAEEMEADRVRKAEMKRADSAIKGARIGVFEFDVKTQSVLVSDLWRELMGLEQTPTKELRMAWMARIHPADLEIAMEPIRRCVDEGHERASSEYRLRSTDGESWRWMRTDLAIAKRDKSGETSCVVGAATDITERKAVESTYHRIAEQFRSSFEAATIGKALVGVDGQFLKVNRSLCELLGYSEDDLCKMDFQSITHPEDLELDLNQFDLLKRGKIPSYKREKRYIRSDGTVLWGLLSVGMITDAEGQPEHFVSQIVDITDQRRLNELKSEFVATVSHELRTPLTSLLGSLTLFSAMEGANLSDGAQRLVSIAEENGKRLSSLINDILDFEKFSARQMSINAAQHEVASLIDDAVLANLPFAEQFGVNFNVTCRERNLAGFFDPKRFQQVLSNFLSNAAKFADEGSTIDILVEAEKHNIRVSVSNQGAGIPESFKDKVFLPFTQAAPVAKRRRGGTGLGLSITKQIVEQMGGDIGFKSNDGEPTTFWFTLPQNMT
>NZ_CP049037.1|WP_165194048.1|1770931_1771324_+|response-regulator
MIEILHVEDDADIREIALIALSLSGEFRVVQCPSGEDAVRQAQGYTPDVLLLDVMMPGMNGPETLGHLRKIPAMIDVPVVFMTARAQQSDVDQLLSLGAAHVISKPFDPLLLGEQVKGIIQEHTPWKIAV
>NZ_CP049037.1|WP_165194067.1|1785034_1785376_-|BrnA-antitoxin-family-protein
MTRMTKTERIAREGLMKNLIQLMRDDWIPLRIETEIPDAWHTLEADVDVTEPKEKVTLYLDRSVARYYRAMGQGYQARINRLLATWAQMHIAREVKLEKMLNARLARNNETDC
>NZ_CP049037.1|WP_165194069.1|1785544_1786693_+|geranylgeranyl-reductase-family-protein
MPTFDLIILGAGPAGSAAAVTARQAGLSVAVIDKAVFPRAKLCGGFFTGRAEGYYRDIFQRPLDPQMFQPREKIAFYLDGTPLGDASDTLPLYLTMRWDMDAHLFDLAVQAGAADFSGHRVAALDLAARSVVLDGGTTLWYQSLIGADGVQSMVARALFGQSFDKTKIGFALEVEAPPQAENAVVRIDFDAASWGYGWQFPKRASTTIGIGGLQSQNSDIQARLATYRARLGDDSPARVKGHFLPFGNYRRVPGRGAVLLAGDAAGFVDPITGEGIAYALQSGHMAAIAAANAIRTGQPDSAMRHYARLVRPIQRSLRLACFLRPLIFASRLRPFFRRAFANSTTVKHAYLSMLSGKVEYPQLMRLTARRLPGALWRSLRRP
>NZ_CP049037.1|WP_165194070.1|1786884_1787091_+|cold-shock-protein
MANGTVKWFNSTKGFGFIAPETGGKDVFVHISAVERAGLTGLADDQKVTFDVEAGRDGRESATNIALA
>NZ_CP049037.1|WP_165194072.1|1787152_1787863_-|arylesterase
MRTRLFVKVFLTYGLCGLRGKALAAFLLLAVTFVGPTARPVYAEDPVTVLALGDSLTQGYGLVQADGFVPQLGQWLTQQGTAARLINGGVSGDTTQGGAARAAWSLTDDVDAMIVALGGNDLLRGIDPTVSRANLETILKVAEQKDVPVLLIGLRAPRNYGPEYKTAFDAIYPELAETHDALYLESFFAGIEAQGGGTQQKYFQADGIHPNKAGVALIVEGIGPSVVALIERAGQK
>NZ_CP049037.1|WP_165194074.1|1787861_1788548_+|ABC-transporter-ATP-binding-protein
MPHPPLSLSGAALSLRSNAGLVEILHGITLEVQSGETLGLVGPSGSGKSSLLMLMGGLERATSGTVTALGHDLSVMSEDALARLRRDHFGVIFQSFHLIPTMTALENVATPLELAGRADAFERARAELAAVGLAGRADHYPSQLSGGEQQRVALARAAAPQPDIVLADEPTGNLDGSTGATIIDLLFDLRDRHGTTLVLVTHDADLAARCDRVISLRDGRIDNTANAA
>NZ_CP049037.1|WP_165194075.1|1788544_1791064_+|FtsX-like-permease-family-protein
MRIALAARLARRELRGGLAGFRILLACIILGVAAIAAVGTIRESITAGLARDGAALLGGDAEIALTYRFATQAEKAWMERNADRISEIVDFRSLARGPDDARALTQVKAVDNAYPLIGNVELDPQIPLSNALRGQDGLPGGVMAPALIAQLGLTIGDSFRLGTQDFRLMAALVDEPDTAMSGFGLGPRTIVATPALQASGLLAPGTLFSARYRLVLPTGTDLATVQSDAETSFASSGLSWRDARNGAPGVAKFVQRLGAFLVLVGLSGLAVGGVGISAAIRAYLARKTGVIATLRTLGAERGVIFASYLLQIGVLAVLGIAMGVLLGAGLPVLLSPLLNARLPVPAVFAFYPAPMIEAAVYGTFTALLFTLWPLARVLDIRAASLFRGDEAHHRTLPSWPFLMVTALLLGGLLYAAVWFSGNLRLTLWTAGGIIGALFLLSVSAQGVRVLAQAMRPAARGRPPLRWALASIGGPGTTAGPVVLSLGLGLSVLAAVGQIDGNLRGAIQGDLHERAPSFFFVDLQKDQMEGFRARLDRDPGVTRIDSAPMLRGIISQINGRPAAEVAGDHWVLRGDRGLTYSAAPPPRARLTAGEWWPSDYSGPPQISFAAEEAAEMGLALGDTITVNILGRDITAEITSLREVDFSTAGIGFIMSMNPAALQGAPHSFISTVYADASSDTAILRDIASTYPNVTAISVRDAVDRVAALLAGLAAATSWGAAATLLTGFLVLIGAAAADQGARVFEAAVLKVLGASRGRILLSLALRAALLGAAAGIVAIGAGILGGWAVSYYVMETDFAVIWPSALIIVAGGIGVTLLAALGFALRPLAARPAQVLRSRE
>NZ_CP049037.1|WP_165194077.1|1791189_1794039_-|aminomethyl-transferring-glycine-dehydrogenase
MAFEPIDYLPYDFANRRHIGPSPDEMAAMLEVLGVDSLDTLIDQTVPKSIRQEKPLDFGKAKSERELLHHMRVTASKNKVLTSLIGQGYHGTVTPPAIQRNIFENPAWYTAYTPYQPEISQGRLEALLNFQTMVSDLTGLEIANASLLDESTACAEAMTMAQRVAKSKKTAFFVDRDCHPQNIAVIQTRAAPLGIEVIVGNPDKMDASAVFGAIFQYPGTYGHVRDYTDHIARLHEADAIGIVSADPLSLTLLKEPGAMNADIAVGSTQRFGIPLGYGGPHAAYMACRDAYKRAMPGRIVGVSIDAHGNRAYRLSLQTREQHIRREKATSNVCTAQALLAVMASMYAVFHGPKGLKAIAQRIHRKTVRMAKGLEKAGFKVDPQSFFDTITVDVGPLQAAVMKSAVDEKINLRKVGETRVGITFDECTRPENVEAVWRAFGITEKDDKFEPEYRVPENMHRKTEYLTHPIFHMNRAETEMMRYMRRLADRDLALDRAMIPLGSCTMKLNAAAEMMPVSWREFSRLHPFVPADQAEGYAELIADLSAKLCDITGYAAISMQPNSGAQGEYAGLLTIAAYHRAQDEGHRNVCLIPVSAHGTNPASAQMVGWKVVVVKSAENGDIDVDDFRAKAEKHAENLAACMITYPSTHGVFEETVRDVCKITHEHGGQVYIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKSHLVEHLPGHPSTGGVQGPVSAAPFGSPSLLPISWAYCLMMGGEGLTQATRVAILNANYIAKRLEGAYDVLYRGSEGRVAHECIIDTRPYADSAHVTVDDIAKRLVDCGFHAPTMSWPVSGTLMIEPTESETKAELDRFCDAMLAIREEIRAIEEGKIDAENNPLKNAPHTMEDLVTDWDRPYSREQGCFPPGAFRVDKYWPPVNRVDNVHGDRHLICTCPPLEDYAEAAE
>NZ_CP049037.1|WP_165194079.1|1794181_1794541_-|glycine-cleavage-system-protein-GcvH
MKFTEEHEWLRVEDDVVVVGITEHAAEQLGDIVFVELPSVGTEVVKDDEVVVIESVKAASDILAPIDGEITEVNDVLTDEPSKVNDDAMGDGWMFKMKASDATQMDDYMDEAAYKKFVG
>NZ_CP049037.1|WP_165194080.1|1794560_1795685_-|glycine-cleavage-system-aminomethyltransferase-GcvT
MSDLRVTPLNALHKELGAKMVPFAGYEMPVQYPLGVMKEHLHCRAEAGLFDVSHMGQVIIRAPGGYDAAATAFETLVPVNALGLGEGRQRYAMFTNDKGGIEDDLMIANRGDHMFVVVNAACKEADITRMTTGLPECEVTEITDRALLALQGPGAEAALEALVPGVASMTFMDVGVMASDWGELWISRSGYTGEDGYEISVPEDQSEALARALIALDAVEPIGLGARDSLRLEAGLCLYGHDIDSGTTPVEAALTWAIQKVRRNGGARAGGFPGADTILAQLDDGPTRRRVGLRPEGRAPMREGTELYAGAEGGDVIGHVTSGAFGPTLGGPMSMGYVTAGFADDGTTIYGDVRGKRLPATITALPFVPANFKR
>NZ_CP049037.1|WP_165194082.1|1796046_1796514_-|Rrf2-family-transcriptional-regulator
MRITKRSNIAMRVLMFCAVQPEKLVTKAEVAARCNASESHLAQIIHQMAQLGYLETQRGRNGGVMLGRPAREIIIGDVFRDIEAEFTASECFADVDNTCPLTSACRLRWAIGAAAEAFFAYLDTITLDTLVCDNFALERILLPTGCGAVARAVPG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	67871-67898	4	0.857
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	223260-223287	5	0.821
NZ_CP049037_2	2.19\|1352939\|29\|NZ_CP049037\|CRISPRCasFinder,CRT,PILER-CR	1352939-1352967	29	NZ_CP033221	Parasedimentitalea marina strain W43 plasmid pW43B, complete sequence	46834-46862	5	0.828
NZ_CP049037_2	2.22\|1353136\|30\|NZ_CP049037\|CRISPRCasFinder,CRT,PILER-CR	1353136-1353165	30	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	222521-222550	5	0.833
NZ_CP049037_2	2.2\|1352152\|29\|NZ_CP049037\|PILER-CR	1352152-1352180	29	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1420696-1420724	6	0.793
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	NC_019957	Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence	253989-254016	6	0.786
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	KX522650	Arthrobacter Phage Conboy, complete genome	28319-28346	6	0.786
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	KX855961	Arthrobacter phage EdgarPoe, complete genome	28319-28346	6	0.786
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_AP022335	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49c, complete sequence	84422-84451	6	0.8
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	MN694530	Marine virus AFVG_250M438, complete genome	30547-30576	6	0.8
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NC_023571	Oenococcus phage phiS11, complete genome	24481-24510	6	0.8
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	MN694240	Marine virus AFVG_250M436, complete genome	31067-31096	6	0.8
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	MN694170	Marine virus AFVG_250M437, complete genome	8113-8142	6	0.8
NZ_CP049037_2	2.2\|1352152\|29\|NZ_CP049037\|PILER-CR	1352152-1352180	29	MH399779	Microbacterium phage Jacko, complete genome	50367-50395	7	0.759
NZ_CP049037_2	2.2\|1352152\|29\|NZ_CP049037\|PILER-CR	1352152-1352180	29	NZ_CP046053	Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence	88519-88547	7	0.759
NZ_CP049037_2	2.3\|1352218\|29\|NZ_CP049037\|PILER-CR	1352218-1352246	29	NC_009453	Arthrobacter sp. Rue61a plasmid pAL1, complete sequence	9996-10024	7	0.759
NZ_CP049037_2	2.7\|1352151\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352151-1352180	30	MH399779	Microbacterium phage Jacko, complete genome	50366-50395	7	0.767
NZ_CP049037_2	2.7\|1352151\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352151-1352180	30	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1420695-1420724	7	0.767
NZ_CP049037_2	2.8\|1352217\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352217-1352246	30	NC_009453	Arthrobacter sp. Rue61a plasmid pAL1, complete sequence	9995-10024	7	0.767
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	982445-982472	7	0.75
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	957802-957829	7	0.75
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	947846-947873	7	0.75
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	982445-982472	7	0.75
NZ_CP049037_2	2.11\|1352415\|28\|NZ_CP049037\|CRISPRCasFinder,CRT	1352415-1352442	28	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	947846-947873	7	0.75
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP015585	Roseomonas gilardii strain U14-5 plasmid 1, complete sequence	75226-75255	7	0.767
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NC_008270	Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence	138567-138596	7	0.767
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	162170-162199	7	0.767
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	147060-147089	7	0.767
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP023738	Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence	119307-119336	7	0.767
NZ_CP049037_2	2.18\|1352873\|30\|NZ_CP049037\|CRISPRCasFinder,CRT,PILER-CR	1352873-1352902	30	MT639650	Gordonia phage Ohgeesy, complete genome	1414-1443	7	0.767
NZ_CP049037_1	1.2\|55578\|34\|NZ_CP049037\|PILER-CR	55578-55611	34	NC_048068	Microbacterium phage OneinaGillian, complete genome	37882-37915	8	0.765
NZ_CP049037_2	2.2\|1352152\|29\|NZ_CP049037\|PILER-CR	1352152-1352180	29	NC_021909	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence	13657-13685	8	0.724
NZ_CP049037_2	2.7\|1352151\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352151-1352180	30	NZ_CP046053	Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence	88518-88547	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP004389	Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence	133305-133334	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	MF399199	Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence	169609-169638	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP040051	Acinetobacter baumannii strain VB16141 plasmid unnamed1, complete sequence	73042-73071	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_AP014650	Acinetobacter baumannii strain IOMTU433 plasmid pIOMTU433, complete sequence	86050-86079	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP023286	Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pCuR, complete sequence	112728-112757	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NC_002760	Acinetobacter sp. EB104, plasmid pAC450, complete genome	2408-2437	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP018859	Xanthomonas citri pv. citri strain LH201 plasmid pLH201.1, complete sequence	93667-93696	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP018851	Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.1, complete sequence	43416-43445	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP018848	Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.1, complete sequence	135822-135851	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP018855	Xanthomonas citri pv. citri strain LH276 plasmid pLH276.1, complete sequence	121600-121629	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	CP040054	Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence	59342-59371	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP050433	Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence	111452-111481	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP038025	Acinetobacter radioresistens strain DD78 plasmid pAR3, complete sequence	66684-66713	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_KU744946	Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence	163122-163151	8	0.733
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP018729	Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.1, complete sequence	121766-121795	8	0.733
NZ_CP049037_2	2.22\|1353136\|30\|NZ_CP049037\|CRISPRCasFinder,CRT,PILER-CR	1353136-1353165	30	MK416013	Klebsiella phage ST16-OXA48phi5.1, complete genome	30277-30306	8	0.733
NZ_CP049037_2	2.7\|1352151\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352151-1352180	30	NC_021909	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence	13656-13685	9	0.7
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1784444-1784473	9	0.7
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	1434379-1434408	9	0.7
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	1347682-1347711	9	0.7
NZ_CP049037_2	2.15\|1352676\|30\|NZ_CP049037\|CRISPRCasFinder,CRT	1352676-1352705	30	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	258484-258513	9	0.7
NZ_CP049037_2	2.22\|1353136\|30\|NZ_CP049037\|CRISPRCasFinder,CRT,PILER-CR	1353136-1353165	30	NC_014214	Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence	124287-124316	9	0.7
NZ_CP049037_1	1.1\|55527\|31\|NZ_CP049037\|PILER-CR	55527-55557	31	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1404729-1404759	10	0.677
NZ_CP049037_1	1.1\|55527\|31\|NZ_CP049037\|PILER-CR	55527-55557	31	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1006293-1006323	10	0.677
NZ_CP049037_1	1.2\|55578\|34\|NZ_CP049037\|PILER-CR	55578-55611	34	NZ_CP051471	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence	79702-79735	10	0.706
NZ_CP049037_1	1.2\|55578\|34\|NZ_CP049037\|PILER-CR	55578-55611	34	NZ_CP030274	Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence	101170-101203	10	0.706
NZ_CP049037_1	1.2\|55578\|34\|NZ_CP049037\|PILER-CR	55578-55611	34	NZ_CP015215	Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence	64983-65016	10	0.706
NZ_CP049037_1	1.2\|55578\|34\|NZ_CP049037\|PILER-CR	55578-55611	34	CP047034	Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence	12014-12047	10	0.706
NZ_CP049037_1	1.2\|55578\|34\|NZ_CP049037\|PILER-CR	55578-55611	34	NZ_CP015291	Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence	26366-26399	10	0.706
NZ_CP049037_1	1.2\|55578\|34\|NZ_CP049037\|PILER-CR	55578-55611	34	NZ_CP047040	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence	12003-12036	10	0.706

1. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 4, identity: 0.857

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
tcagcgccggcgcaatcgtgttgatcgc	Protospacer
.******* ******** *********

2. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 5, identity: 0.821

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
cgatggcccgcgcaatcctgatgatccg	Protospacer
* *  *************** ***** *

3. spacer 2.19|1352939|29|NZ_CP049037|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033221 (Parasedimentitalea marina strain W43 plasmid pW43B, complete sequence) position: , mismatch: 5, identity: 0.828

gatgatcgcgcgcgcgactacatctggca	CRISPR spacer
gaatatcgcgcgcgcaactacatctcgcg	Protospacer
**  ***********.********* **.

4. spacer 2.22|1353136|30|NZ_CP049037|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 5, identity: 0.833

actccggcagattggcctccaccaacgtaa	CRISPR spacer
cctccggcagattggcctcgacgaacgtct	Protospacer
 ****************** ** *****

5. spacer 2.2|1352152|29|NZ_CP049037|PILER-CR matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 6, identity: 0.793

cgccaaaccggctcgtgctggcggcaaaa	CRISPR spacer
taccaaaccggctcgcgcttgcggcggaa	Protospacer
..*************.*** *****..**

6. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to NC_019957 (Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence) position: , mismatch: 6, identity: 0.786

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
cacgcgcccacgcaatcctgtggatccc	Protospacer
*  ******.*********** ****

7. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to KX522650 (Arthrobacter Phage Conboy, complete genome) position: , mismatch: 6, identity: 0.786

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
ccagcactcgcgcaatcctgttggcggc	Protospacer
*****.*.***************.. *

8. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to KX855961 (Arthrobacter phage EdgarPoe, complete genome) position: , mismatch: 6, identity: 0.786

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
ccagcactcgcgcaatcctgttggcggc	Protospacer
*****.*.***************.. *

9. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_AP022335 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49c, complete sequence) position: , mismatch: 6, identity: 0.8

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
gtgccgctgcaggaggccatgcagcaatcg	Protospacer
*  *** ***** ************** .*

10. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to MN694530 (Marine virus AFVG_250M438, complete genome) position: , mismatch: 6, identity: 0.8

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
caggccatgcagcaggcgatgcagcagatg	Protospacer
 *  * *********** ********.***

11. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NC_023571 (Oenococcus phage phiS11, complete genome) position: , mismatch: 6, identity: 0.8

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
gatccgatgcagcaggcctggcaggccaag	Protospacer
******************  ****   * *

12. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to MN694240 (Marine virus AFVG_250M436, complete genome) position: , mismatch: 6, identity: 0.8

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
caggccatgcagcaggcgatgcagcagatg	Protospacer
 *  * *********** ********.***

13. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to MN694170 (Marine virus AFVG_250M437, complete genome) position: , mismatch: 6, identity: 0.8

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
caggccatgcagcaggcgatgcagcagatg	Protospacer
 *  * *********** ********.***

14. spacer 2.2|1352152|29|NZ_CP049037|PILER-CR matches to MH399779 (Microbacterium phage Jacko, complete genome) position: , mismatch: 7, identity: 0.759

cgccaaaccggctcgtgctggcggcaaaa	CRISPR spacer
ggcccgaccggctcgtgctggcggcgttc	Protospacer
 *** .*******************.

15. spacer 2.2|1352152|29|NZ_CP049037|PILER-CR matches to NZ_CP046053 (Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

cgccaaaccggctcgtgctggcggcaaaa	CRISPR spacer
cgccataccggctcgtcctggcgtccgcg	Protospacer
***** ********** ****** * . .

16. spacer 2.3|1352218|29|NZ_CP049037|PILER-CR matches to NC_009453 (Arthrobacter sp. Rue61a plasmid pAL1, complete sequence) position: , mismatch: 7, identity: 0.759

ctgtgagcataggaacgcaatcgccacga	CRISPR spacer
ccatgagcatagaaacacaatcgccagat	Protospacer
*..*********.***.********* .

17. spacer 2.7|1352151|30|NZ_CP049037|CRISPRCasFinder,CRT matches to MH399779 (Microbacterium phage Jacko, complete genome) position: , mismatch: 7, identity: 0.767

ccgccaaaccggctcgtgctggcggcaaaa	CRISPR spacer
cggcccgaccggctcgtgctggcggcgttc	Protospacer
* *** .*******************.

18. spacer 2.7|1352151|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 7, identity: 0.767

ccgccaaaccggctcgtgctggcggcaaaa	CRISPR spacer
ttaccaaaccggctcgcgcttgcggcggaa	Protospacer
...*************.*** *****..**

19. spacer 2.8|1352217|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NC_009453 (Arthrobacter sp. Rue61a plasmid pAL1, complete sequence) position: , mismatch: 7, identity: 0.767

cctgtgagcataggaacgcaatcgccacga	CRISPR spacer
cccatgagcatagaaacacaatcgccagat	Protospacer
**..*********.***.********* .

20. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 7, identity: 0.75

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
ccatcgccggcgcaatcctgttggcgat	Protospacer
*** **** **************.. .

21. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 7, identity: 0.75

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
ccatcgccggcgcaatcctgttggcgat	Protospacer
*** **** **************.. .

22. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 7, identity: 0.75

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
ccatcgccggcgcaatcctgttggcgat	Protospacer
*** **** **************.. .

23. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 7, identity: 0.75

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
ccatcgccggcgcaatcctgttggcgat	Protospacer
*** **** **************.. .

24. spacer 2.11|1352415|28|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 7, identity: 0.75

ccagcgcccgcgcaatcctgttgatcgg	CRISPR spacer
ccatcgccggcgcaatcctgttggcgat	Protospacer
*** **** **************.. .

25. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP015585 (Roseomonas gilardii strain U14-5 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
gatccgctgcagcaggccatccaggcggtc	Protospacer
****** ************* ***  ..*

26. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NC_008270 (Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence) position: , mismatch: 7, identity: 0.767

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
gcttggatgcagcagggcatgcagcacctc	Protospacer
* *. *********** *********  *

27. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 7, identity: 0.767

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
aaaaccgtgcagcagatcatgcagcaaatg	Protospacer
.*  * .********..*************

28. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 7, identity: 0.767

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
aaaaccgtgcagcagatcatgcagcaaatg	Protospacer
.*  * .********..*************

29. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP023738 (Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence) position: , mismatch: 7, identity: 0.767

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
gtgccgctgcaggaggccatgcagcagtcg	Protospacer
*  *** ***** *************. .*

30. spacer 2.18|1352873|30|NZ_CP049037|CRISPRCasFinder,CRT,PILER-CR matches to MT639650 (Gordonia phage Ohgeesy, complete genome) position: , mismatch: 7, identity: 0.767

cccggctcgcgatcggctacca----acgccgga	CRISPR spacer
tccggctcgagatcggctaccacgaggcgc----	Protospacer
.******** ************    .***

31. spacer 1.2|55578|34|NZ_CP049037|PILER-CR matches to NC_048068 (Microbacterium phage OneinaGillian, complete genome) position: , mismatch: 8, identity: 0.765

-catagatgtccacgccgcggttgccggtcatggt	CRISPR spacer
gcat-cttgtccaggccggggttgccggtcaaaat	Protospacer
 ***   ****** **** ************ ..*

32. spacer 2.2|1352152|29|NZ_CP049037|PILER-CR matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 8, identity: 0.724

cgccaaaccggctcgtgctggcggcaaaa	CRISPR spacer
gcgcaaaccggctcgtcctggcggccgcg	Protospacer
   ************* ******** . .

33. spacer 2.7|1352151|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP046053 (Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ccgccaaaccggctcgtgctggcggcaaaa	CRISPR spacer
gcgccataccggctcgtcctggcgtccgcg	Protospacer
 ***** ********** ****** * . .

34. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP004389 (Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
cgaatgatgcagcatgccatgcaggaaatc	Protospacer
 .  .********* ********* ****

35. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to MF399199 (Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
tttttgatgcagcagtcgatgcagcaaagc	Protospacer
  *..********** * **********

36. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP040051 (Acinetobacter baumannii strain VB16141 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
tttttgatgcagcagtcgatgcagcaaagc	Protospacer
  *..********** * **********

37. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_AP014650 (Acinetobacter baumannii strain IOMTU433 plasmid pIOMTU433, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
tttttgatgcagcagtcgatgcagcaaagc	Protospacer
  *..********** * **********

38. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP023286 (Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pCuR, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
aagggcatgctgcaggccgtgcagcaaatt	Protospacer
.*    **** *******.**********

39. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NC_002760 (Acinetobacter sp. EB104, plasmid pAC450, complete genome) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
tttttgatgcagcagtcgatgcagcaaagc	Protospacer
  *..********** * **********

40. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP018859 (Xanthomonas citri pv. citri strain LH201 plasmid pLH201.1, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
aagggcatgctgcaggccgtgcagcaaatt	Protospacer
.*    **** *******.**********

41. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP018851 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.1, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
aagggcatgctgcaggccgtgcagcaaatt	Protospacer
.*    **** *******.**********

42. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP018848 (Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.1, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
aagggcatgctgcaggccgtgcagcaaatt	Protospacer
.*    **** *******.**********

43. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP018855 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.1, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
aagggcatgctgcaggccgtgcagcaaatt	Protospacer
.*    **** *******.**********

44. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to CP040054 (Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
tttttgatgcagcagtcgatgcagcaaagc	Protospacer
  *..********** * **********

45. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP050433 (Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
tttttgatgcagcagtcgatgcagcaaagc	Protospacer
  *..********** * **********

46. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP038025 (Acinetobacter radioresistens strain DD78 plasmid pAR3, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
tttttgatgcagcagtcgatgcagcaaagc	Protospacer
  *..********** * **********

47. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_KU744946 (Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
tttttgatgcagcagtcgatgcagcaaagc	Protospacer
  *..********** * **********

48. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP018729 (Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.1, complete sequence) position: , mismatch: 8, identity: 0.733

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
aagggcatgctgcaggccgtgcagcaaatt	Protospacer
.*    **** *******.**********

49. spacer 2.22|1353136|30|NZ_CP049037|CRISPRCasFinder,CRT,PILER-CR matches to MK416013 (Klebsiella phage ST16-OXA48phi5.1, complete genome) position: , mismatch: 8, identity: 0.733

actccggcagattggcctccaccaacgtaa	CRISPR spacer
cctccggcagattggccctcaccagcactt	Protospacer
 ****************..*****.*..

50. spacer 2.7|1352151|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 9, identity: 0.7

ccgccaaaccggctcgtgctggcggcaaaa	CRISPR spacer
ggcgcaaaccggctcgtcctggcggccgcg	Protospacer
    ************* ******** . .

51. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.7

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
acgtcgatgcagcaggcgatgctgcaacgc	Protospacer
.  .************* **** ****

52. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.7

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
atgccgatgcaggaggccatgcagatcacc	Protospacer
.  ********* ***********   *.

53. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 9, identity: 0.7

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
atgccgatgcaggaggccatgcagatcacc	Protospacer
.  ********* ***********   *.

54. spacer 2.15|1352676|30|NZ_CP049037|CRISPRCasFinder,CRT matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 9, identity: 0.7

gatccgatgcagcaggccatgcagcaaatg	CRISPR spacer
tgcccgatgcagcaggccttgccgcatcga	Protospacer
 ..*************** *** ***   .

55. spacer 2.22|1353136|30|NZ_CP049037|CRISPRCasFinder,CRT,PILER-CR matches to NC_014214 (Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence) position: , mismatch: 9, identity: 0.7

actccggcagattggcctccaccaacgtaa	CRISPR spacer
actcccgcagcttggcctccacccggcggc	Protospacer
***** **** ************ .   .

56. spacer 1.1|55527|31|NZ_CP049037|PILER-CR matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.677

cagccgtgtcgccctcggacaggtacatcac	CRISPR spacer
tgaggaagtcggcctcggacagggacatcag	Protospacer
...  . **** *********** ******

57. spacer 1.1|55527|31|NZ_CP049037|PILER-CR matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.677

cagccgtgtcgccctcggacaggtacatcac	CRISPR spacer
tgaggaagtcggcctcggacagggacatcag	Protospacer
...  . **** *********** ******

58. spacer 1.2|55578|34|NZ_CP049037|PILER-CR matches to NZ_CP051471 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence) position: , mismatch: 10, identity: 0.706

catagatgtccacgccgcggttgccggtcatggt	CRISPR spacer
tgtagatgtcctggccgcggttgccgagctcgcg	Protospacer
..*********  *************. * .*

59. spacer 1.2|55578|34|NZ_CP049037|PILER-CR matches to NZ_CP030274 (Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.706

catagatgtccacgccgcggttgccggtcatggt	CRISPR spacer
tgtagatgtcctggccgcggttgccgagctcgcg	Protospacer
..*********  *************. * .*

60. spacer 1.2|55578|34|NZ_CP049037|PILER-CR matches to NZ_CP015215 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence) position: , mismatch: 10, identity: 0.706

catagatgtccacgccgcggttgccggtcatggt	CRISPR spacer
tgtagatgtcctggccgcggttgccgagctcgcg	Protospacer
..*********  *************. * .*

61. spacer 1.2|55578|34|NZ_CP049037|PILER-CR matches to CP047034 (Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.706

catagatgtccacgccgcggttgccggtcatggt	CRISPR spacer
tgtagatgtcctggccgcggttgccgagctcgcg	Protospacer
..*********  *************. * .*

62. spacer 1.2|55578|34|NZ_CP049037|PILER-CR matches to NZ_CP015291 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence) position: , mismatch: 10, identity: 0.706

catagatgtccacgccgcggttgccggtcatggt	CRISPR spacer
tgtagatgtcctggccgcggttgccgagctcgcg	Protospacer
..*********  *************. * .*

63. spacer 1.2|55578|34|NZ_CP049037|PILER-CR matches to NZ_CP047040 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.706

catagatgtccacgccgcggttgccggtcatggt	CRISPR spacer
tgtagatgtcctggccgcggttgccgagctcgcg	Protospacer
..*********  *************. * .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1391836 : 1399128

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165193446.1\|1391836_1393342_+	malonyl-CoA synthase	A0A2H4PQM9	Staphylococcus_phage	1.0e-38	29.6
WP_165193448.1\|1393509_1395219_-	bifunctional sulfate adenylyltransferase/adenylylsulfate kinase	A0A2P1ELS9	Moumouvirus	5.6e-118	42.0
WP_165193450.1\|1395605_1396175_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.5e-40	50.5
WP_165193451.1\|1396171_1397209_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.6e-89	49.5
WP_165193453.1\|1397265_1398108_+	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	7.9e-33	37.5
WP_165193455.1\|1398243_1399128_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	7.7e-87	53.7

DBSCAN-SWA_2

2731310 : 2742206

Paracoccus_phage(42.86%)

capsid,protease,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165195599.1\|2731310_2735318_-	host specificity protein	A0A0B5A7K5	Paracoccus_phage	1.3e-221	38.4
WP_165195601.1\|2735317_2735767_-	peptidase	F4YXU4	Roseobacter_phage	2.8e-29	46.4
WP_165195603.1\|2735763_2736651_-	DUF2163 domain-containing protein	A0A0K0PVK1	Roseobacter_phage	3.1e-59	39.9
WP_165195605.1\|2736647_2737280_-	DUF2460 domain-containing protein	A0A0B5A2K3	Paracoccus_phage	3.8e-56	49.0
WP_165197896.1\|2737298_2737958_-\|tail	phage tail tape measure protein	D6PFD6	uncultured_phage	1.3e-14	43.1
WP_165195607.1\|2737950_2738154_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_165197898.1\|2738150_2738471_-	gene transfer agent family protein	NA	NA	NA	NA
WP_165195609.1\|2738475_2738889_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_165195611.1\|2738906_2739326_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_165195613.1\|2739322_2739661_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_165195615.1\|2739660_2740260_-	hypothetical protein	NA	NA	NA	NA
WP_165195617.1\|2740419_2741613_-\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	2.8e-63	39.2
WP_165195619.1\|2741648_2742206_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	4.0e-33	48.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP049040

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 1383

Dishui_lake_phycodnavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198457.1\|300_1383_+	AAA family ATPase	A0A2K9R7H3	Dishui_lake_phycodnavirus	2.9e-19	29.2

DBSCAN-SWA_2

13332 : 80637

Geobacillus_virus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198465.1\|13332_14502_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_165194052.1\|16815_17859_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	1.7e-16	26.8
WP_165198466.1\|18548_20720_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_165198467.1\|20998_21916_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_165198468.1\|21905_22736_-	hypothetical protein	NA	NA	NA	NA
WP_165198469.1\|22982_23630_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.1e-25	38.3
WP_165198470.1\|23757_27108_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	1.5e-77	25.9
WP_165198471.1\|27104_28604_-	DNA polymerase Y family protein	NA	NA	NA	NA
WP_165198472.1\|28530_29118_-	hypothetical protein	NA	NA	NA	NA
WP_165198473.1\|29107_29788_-	SOS response-associated peptidase	A0A291AUP1	Sinorhizobium_phage	4.1e-40	41.6
WP_165198474.1\|30830_31169_+	DUF736 domain-containing protein	NA	NA	NA	NA
WP_165198475.1\|31800_31977_+	hypothetical protein	NA	NA	NA	NA
WP_165198476.1\|32502_33123_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_165198477.1\|33115_35056_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_165198478.1\|35070_36984_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_165198479.1\|37052_38453_+	hypothetical protein	NA	NA	NA	NA
WP_165192002.1\|39631_40018_+\|transposase	transposase	NA	NA	NA	NA
WP_165192003.1\|40014_40368_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_165192004.1\|40423_41935_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.1e-96	39.3
WP_165198480.1\|42092_42338_+	hypothetical protein	NA	NA	NA	NA
WP_165198481.1\|42353_44201_-	hypothetical protein	NA	NA	NA	NA
WP_165198482.1\|44197_44689_-	threonine transporter	NA	NA	NA	NA
WP_165198483.1\|44676_45759_-	hypothetical protein	NA	NA	NA	NA
WP_165198547.1\|45851_46808_-	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA
WP_165198484.1\|46864_48289_-	type IV secretion system protein B10	NA	NA	NA	NA
WP_165198485.1\|48291_49026_-	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_165198486.1\|49031_49712_-	type IV secretion system protein	NA	NA	NA	NA
WP_165198487.1\|49729_50743_-	type IV secretion system protein	NA	NA	NA	NA
WP_165198548.1\|50743_51043_-	hypothetical protein	NA	NA	NA	NA
WP_165198488.1\|51177_51945_-	hypothetical protein	NA	NA	NA	NA
WP_165198489.1\|51941_53054_-	transglycosylase SLT domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	1.6e-25	54.0
WP_165198490.1\|53050_53260_-	hypothetical protein	NA	NA	NA	NA
WP_165198491.1\|53256_55635_-	type IV secretion system protein B4	NA	NA	NA	NA
WP_165198492.1\|55624_55903_-	type IV secretion system protein VirB3	NA	NA	NA	NA
WP_165198493.1\|55918_56200_-	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_165198549.1\|56216_56774_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	1.3e-20	44.6
WP_165198494.1\|56853_57168_-	hypothetical protein	NA	NA	NA	NA
WP_165198495.1\|57300_57879_+	hypothetical protein	NA	NA	NA	NA
WP_165198496.1\|57872_58073_-	hypothetical protein	NA	NA	NA	NA
WP_165198497.1\|58430_59357_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_165198498.1\|59356_60115_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_165198499.1\|60131_61619_-	aspartate ammonia-lyase	NA	NA	NA	NA
WP_165198500.1\|61945_63223_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_165198501.1\|63240_63669_+	RidA family protein	NA	NA	NA	NA
WP_165198502.1\|63665_64340_+	DUF1028 domain-containing protein	NA	NA	NA	NA
WP_165198503.1\|64372_65869_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_165198504.1\|65912_67982_+	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_165198505.1\|67978_69145_+	acetylornithine deacetylase	NA	NA	NA	NA
WP_165198506.1\|69151_70081_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_165198507.1\|70229_71744_-	4-hydroxyphenylacetate 3-hydroxylase	NA	NA	NA	NA
WP_165198550.1\|71979_73005_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_165198551.1\|73049_73859_-	ABC transporter permease	NA	NA	NA	NA
WP_165198508.1\|73858_74788_-	ABC transporter permease	NA	NA	NA	NA
WP_165198509.1\|74787_75906_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.4e-24	40.1
WP_165198510.1\|76146_76359_-\|transposase	transposase	NA	NA	NA	NA
WP_165198552.1\|76398_77624_-\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	2.0e-69	48.6
WP_165198511.1\|79383_80637_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	1.2e-13	37.4

DBSCAN-SWA_3

94249 : 98889

Streptococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198519.1\|94249_95671_+\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	1.0e-32	27.0
WP_165194052.1\|96074_97118_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	1.7e-16	26.8
WP_165192004.1\|97377_98889_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.1e-96	39.3

DBSCAN-SWA_4

104772 : 106373

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198524.1\|104772_105705_-	ribose-phosphate pyrophosphokinase	A0A2K9L8D8	Tupanvirus	4.3e-48	39.5
WP_165198525.1\|105746_106373_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	7.5e-12	37.2

DBSCAN-SWA_5

109844 : 110789

Vibrio_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198528.1\|109844_110789_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	1.6e-42	35.0

DBSCAN-SWA_6

114241 : 115408

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198531.1\|114241_115408_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	30.1

DBSCAN-SWA_7

120606 : 122678

Enterobacteria_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198534.1\|120606_121839_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	1.4e-41	32.4
WP_165198535.1\|121835_122678_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	7.6e-52	49.1

DBSCAN-SWA_8

126850 : 128245

Brevibacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165198538.1\|126850_128245_+	AAA family ATPase	A0A0K2FLP4	Brevibacillus_phage	4.9e-11	28.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP049039

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP049038

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP049037

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP049040

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection