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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP049052 Lactobacillus delbrueckii subsp. bulgaricus strain LJJ chromosome, complete genome 4 crisprs cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csa3,Cas14u_CAS-V,c2c9_V-U4,cas14j,WYL 1 11 9 0

Results visualization

1. NZ_CP049052
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049052_1 266998-267136 TypeV NA
1 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049052_2 705549-705675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049052_3 773209-774499 TypeII NA
19 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049052_4 1801623-1801725 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP049052_1 1.1|267050|35|NZ_CP049052|CRISPRCasFinder 267050-267084 35 NZ_CP049052.1 267122-267156 0 1.0

1. spacer 1.1|267050|35|NZ_CP049052|CRISPRCasFinder matches to position: 267122-267156, mismatch: 0, identity: 1.0

ttctgccgttagttcgacaaaatcctcctcaagcc	CRISPR spacer
ttctgccgttagttcgacaaaatcctcctcaagcc	Protospacer
***********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP049052_3 3.11|773906|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773906-773935 30 AF182207 Lactobacillus phage mv4 early region, complete sequence 305-334 2 0.933
NZ_CP049052_3 3.16|774236|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774236-774265 30 AF182207 Lactobacillus phage mv4 early region, complete sequence 6349-6378 2 0.933
NZ_CP049052_3 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774434-774463 30 NC_022775 Lactobacillus phage phiJB, complete genome 23858-23887 2 0.933
NZ_CP049052_3 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774434-774463 30 L02497 Bacteriophage mv4 ORF1, 3' end; minor structural protein (g20) gene, complete cds; major capsid protein (g34) gene, complete cds; ORF4-5, complete cds; ORF6, 5' end 322-351 3 0.9
NZ_CP049052_3 3.11|773906|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773906-773935 30 EF455602 Lactobacillus phage LL-H, complete genome 31332-31361 4 0.867
NZ_CP049052_3 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774434-774463 30 EF455602 Lactobacillus phage LL-H, complete genome 6377-6406 4 0.867
NZ_CP049052_3 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773378-773407 30 MN693689 Marine virus AFVG_250M368, complete genome 16575-16604 5 0.833
NZ_CP049052_3 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773774-773803 30 NZ_CP021332 Maritalea myrionectae strain HL2708#5 plasmid pHL2708Y3, complete sequence 79550-79579 5 0.833
NZ_CP049052_3 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774434-774463 30 CP031025 Lactobacillus phage ViSo-2018b, partial genome 20119-20148 5 0.833
NZ_CP049052_3 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773378-773407 30 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 191176-191205 6 0.8
NZ_CP049052_3 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774434-774463 30 NC_013972 Erwinia amylovora ATCC 49946 plasmid 1, complete sequence 23616-23645 6 0.8
NZ_CP049052_3 3.1|773245|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773245-773274 30 NZ_CP024314 Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence 2322520-2322549 7 0.767
NZ_CP049052_3 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773378-773407 30 LR794152 Bacteriophage APSE-2 strain HaErgrossulariae-3692 genome assembly, chromosome: 1 21525-21554 7 0.767
NZ_CP049052_3 3.5|773510|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773510-773539 30 NZ_CP018030 Alteromonas mediterranea strain RG65 plasmid MRG65-300, complete sequence 91523-91552 7 0.767
NZ_CP049052_3 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773840-773869 30 NC_018141 Legionella pneumophila subsp. pneumophila plasmid pLELO, complete sequence 119218-119247 7 0.767
NZ_CP049052_3 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773840-773869 30 NZ_CP025492 Legionella sainthelensi strain LA01-117 plasmid pLA01-117_150k, complete sequence 41248-41277 7 0.767
NZ_CP049052_3 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773840-773869 30 NZ_CP021284 Legionella pneumophila subsp. pneumophila strain Allentown 1 (D-7475) plasmid unnamed1, complete sequence 112552-112581 7 0.767
NZ_CP049052_3 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773840-773869 30 NZ_CP011106 Legionella pneumophila strain L10-023 isolate Ulm plasmid unnamed, complete sequence 109432-109461 7 0.767
NZ_CP049052_3 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773840-773869 30 NZ_CP045305 Legionella longbeachae strain B1445CHC plasmid pB1445CHC_150k, complete sequence 34836-34865 7 0.767
NZ_CP049052_3 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773840-773869 30 NZ_CP042253 Legionella longbeachae strain B3526CHC plasmid pB3526CHC_150k, complete sequence 37024-37053 7 0.767
NZ_CP049052_3 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773840-773869 30 NZ_CP042837 Enterococcus sp. DA9 plasmid unnamed2 14730-14759 7 0.767
NZ_CP049052_3 3.13|774038|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774038-774067 30 NZ_CP045351 Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence 230088-230117 7 0.767
NZ_CP049052_3 3.17|774302|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774302-774331 30 NZ_CP022366 Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence 499902-499931 7 0.767
NZ_CP049052_3 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773378-773407 30 MN693686 Marine virus AFVG_250M1168, complete genome 34069-34098 8 0.733
NZ_CP049052_3 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773378-773407 30 MN694344 Marine virus AFVG_250M1167, complete genome 10188-10217 8 0.733
NZ_CP049052_3 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773774-773803 30 NZ_MF996511 Bacillus glycinifermentans strain KBN06P03352 plasmid unnamed3, complete sequence 29171-29200 8 0.733
NZ_CP049052_3 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773840-773869 30 HM144387 Bacillus phage W.Ph., complete genome 145396-145425 8 0.733
NZ_CP049052_3 3.11|773906|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773906-773935 30 MN694692 Marine virus AFVG_250M385, complete genome 4753-4782 8 0.733
NZ_CP049052_3 3.2|773311|31|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773311-773341 31 AP017994 Planktothrix agardhii NIES-204 plasmid plasmid3 DNA, complete sequence 28270-28300 9 0.71
NZ_CP049052_3 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773774-773803 30 NZ_CP032686 Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence 475187-475216 9 0.7
NZ_CP049052_3 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773774-773803 30 NZ_CP032691 Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence 466504-466533 9 0.7
NZ_CP049052_3 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773774-773803 30 NZ_CP023000 Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence 593124-593153 9 0.7
NZ_CP049052_3 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773774-773803 30 NC_020062 Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence 379761-379790 9 0.7
NZ_CP049052_3 3.11|773906|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 773906-773935 30 MH616991 Microviridae sp. isolate ctbg483, complete genome 2406-2435 9 0.7
NZ_CP049052_3 3.17|774302|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774302-774331 30 NZ_CP032685 Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence 686046-686075 9 0.7
NZ_CP049052_3 3.17|774302|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT 774302-774331 30 NZ_CP032690 Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence 685595-685624 9 0.7

1. spacer 3.11|773906|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to AF182207 (Lactobacillus phage mv4 early region, complete sequence) position: , mismatch: 2, identity: 0.933

ctacggcagtttctggctctacgtagagct	CRISPR spacer
ctacggcagtttctggcattacgtagagct	Protospacer
***************** .***********

2. spacer 3.16|774236|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to AF182207 (Lactobacillus phage mv4 early region, complete sequence) position: , mismatch: 2, identity: 0.933

atcgggctgtagcgtgggttatctggcagc	CRISPR spacer
atcggactgtagtgtgggttatctggcagc	Protospacer
*****.******.*****************

3. spacer 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NC_022775 (Lactobacillus phage phiJB, complete genome) position: , mismatch: 2, identity: 0.933

acacgatttcttgacccggcagtatgaccg	CRISPR spacer
aaatgatttcttgacccggcagtatgaccg	Protospacer
* *.**************************

4. spacer 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to L02497 (Bacteriophage mv4 ORF1, 3' end; minor structural protein (g20) gene, complete cds; major capsid protein (g34) gene, complete cds; ORF4-5, complete cds; ORF6, 5' end) position: , mismatch: 3, identity: 0.9

acacgatttcttgacccggcagtatgaccg	CRISPR spacer
aaatgatttcttgacccggcagtatgacag	Protospacer
* *.************************ *

5. spacer 3.11|773906|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to EF455602 (Lactobacillus phage LL-H, complete genome) position: , mismatch: 4, identity: 0.867

ctacggcagtttctggctctacgtagagct	CRISPR spacer
ctacggcagtttctggcattacgtagaaat	Protospacer
***************** .********. *

6. spacer 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to EF455602 (Lactobacillus phage LL-H, complete genome) position: , mismatch: 4, identity: 0.867

acacgatttcttgacccggcagtatgaccg	CRISPR spacer
aaatgatttcttaacccggcaatatgaccg	Protospacer
* *.********.********.********

7. spacer 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to MN693689 (Marine virus AFVG_250M368, complete genome) position: , mismatch: 5, identity: 0.833

agggtacaaataaaaacggcaaagagtttg	CRISPR spacer
aggaaaataataaaaaaggcaaagagtttg	Protospacer
***. *  ******** *************

8. spacer 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021332 (Maritalea myrionectae strain HL2708#5 plasmid pHL2708Y3, complete sequence) position: , mismatch: 5, identity: 0.833

ttgctggatagtcatggtgacttccacatc	CRISPR spacer
ctggtggatagtcttggtgacttccaccac	Protospacer
.** ********* *************  *

9. spacer 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to CP031025 (Lactobacillus phage ViSo-2018b, partial genome) position: , mismatch: 5, identity: 0.833

acacgatttcttgacccggcagtatgaccg	CRISPR spacer
aaataatttcttaacccggcaatatgaccg	Protospacer
* *..*******.********.********

10. spacer 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 6, identity: 0.8

agggtacaaataaaaacggcaaagagtttg	CRISPR spacer
atgcgacaaataaaaacggccaagacttta	Protospacer
* *  *************** **** ***.

11. spacer 3.19|774434|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NC_013972 (Erwinia amylovora ATCC 49946 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.8

--acacgatttcttgacccggcagtatgaccg	CRISPR spacer
gttaacga--acttgacccggcagtatgcccg	Protospacer
    ****   ***************** ***

12. spacer 3.1|773245|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 7, identity: 0.767

acgcgcttctgcgcgcctttttgattgcaa	CRISPR spacer
aggcgcttctgcgcgcctgttggatacctt	Protospacer
* **************** ** ***  *  

13. spacer 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to LR794152 (Bacteriophage APSE-2 strain HaErgrossulariae-3692 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.767

agggtacaaataaaaacggcaaagagtttg	CRISPR spacer
agggtaaaaataaaaaaggcaaaaataatt	Protospacer
****** ********* ******.*   * 

14. spacer 3.5|773510|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018030 (Alteromonas mediterranea strain RG65 plasmid MRG65-300, complete sequence) position: , mismatch: 7, identity: 0.767

ccgcgaaggaatcaacctggttatcgatga	CRISPR spacer
cgtttaatgtatcaacctggttatcgataa	Protospacer
*  . ** * ******************.*

15. spacer 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NC_018141 (Legionella pneumophila subsp. pneumophila plasmid pLELO, complete sequence) position: , mismatch: 7, identity: 0.767

aagaaaaaacttacatttacatatatccac	CRISPR spacer
gagaaaaaacttacatttacctatcaggaa	Protospacer
.******************* ***    * 

16. spacer 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025492 (Legionella sainthelensi strain LA01-117 plasmid pLA01-117_150k, complete sequence) position: , mismatch: 7, identity: 0.767

aagaaaaaacttacatttacatatatccac	CRISPR spacer
gagaaaaaacttacatttacctatcaggaa	Protospacer
.******************* ***    * 

17. spacer 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021284 (Legionella pneumophila subsp. pneumophila strain Allentown 1 (D-7475) plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

aagaaaaaacttacatttacatatatccac	CRISPR spacer
gagaaaaaacttacatttacctatcaggaa	Protospacer
.******************* ***    * 

18. spacer 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011106 (Legionella pneumophila strain L10-023 isolate Ulm plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

aagaaaaaacttacatttacatatatccac	CRISPR spacer
gagaaaaaacttacatttacctatcaggaa	Protospacer
.******************* ***    * 

19. spacer 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045305 (Legionella longbeachae strain B1445CHC plasmid pB1445CHC_150k, complete sequence) position: , mismatch: 7, identity: 0.767

aagaaaaaacttacatttacatatatccac	CRISPR spacer
gagaaaaaacttacatttacctatcaggaa	Protospacer
.******************* ***    * 

20. spacer 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042253 (Legionella longbeachae strain B3526CHC plasmid pB3526CHC_150k, complete sequence) position: , mismatch: 7, identity: 0.767

aagaaaaaacttacatttacatatatccac	CRISPR spacer
gagaaaaaacttacatttacctatcaggaa	Protospacer
.******************* ***    * 

21. spacer 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042837 (Enterococcus sp. DA9 plasmid unnamed2) position: , mismatch: 7, identity: 0.767

aagaaaaaacttacatttacatatatccac	CRISPR spacer
ttcaaaaaacttacatttacttacatatac	Protospacer
   ***************** **.** .**

22. spacer 3.13|774038|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 7, identity: 0.767

ggaattaggactttttccgatttagtccgg	CRISPR spacer
ctacgtaggactttttcagatttagtcgga	Protospacer
  *  ************ ********* *.

23. spacer 3.17|774302|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 7, identity: 0.767

gccccggctcatttgccgccggcttgcata	CRISPR spacer
ccgccggcttatttgccgccggcttatttg	Protospacer
 * ******.***************.. *.

24. spacer 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to MN693686 (Marine virus AFVG_250M1168, complete genome) position: , mismatch: 8, identity: 0.733

agggtacaaataaaaacggcaaagagtttg	CRISPR spacer
cttatacaaataaaaacggcaaggaaatta	Protospacer
   .******************.**. **.

25. spacer 3.3|773378|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to MN694344 (Marine virus AFVG_250M1167, complete genome) position: , mismatch: 8, identity: 0.733

agggtacaaataaaaacggcaaagagtttg	CRISPR spacer
cttatacaaataaaaacggcaaggaaatta	Protospacer
   .******************.**. **.

26. spacer 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF996511 (Bacillus glycinifermentans strain KBN06P03352 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

ttgctggatagtcatggtgacttccacatc	CRISPR spacer
ttgctggatagtcatgttgaatttttgctg	Protospacer
**************** *** **..   * 

27. spacer 3.10|773840|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to HM144387 (Bacillus phage W.Ph., complete genome) position: , mismatch: 8, identity: 0.733

aagaaaaaacttacatttacatatatccac	CRISPR spacer
gacaaaacacttacatttacatttattgta	Protospacer
.* **** ************** ***.   

28. spacer 3.11|773906|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to MN694692 (Marine virus AFVG_250M385, complete genome) position: , mismatch: 8, identity: 0.733

ctacggcagtttctggctctacgtagagct	CRISPR spacer
gtgcggcagttgatggctctacgtagcctg	Protospacer
 *.********  *************  . 

29. spacer 3.2|773311|31|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to AP017994 (Planktothrix agardhii NIES-204 plasmid plasmid3 DNA, complete sequence) position: , mismatch: 9, identity: 0.71

gagaacggatcaatcacgccaaaggttacta	CRISPR spacer
ttggggggaacaatcacggcaaaggttacag	Protospacer
  *.. *** ******** ********** .

30. spacer 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 9, identity: 0.7

ttgctggatagtcatggtgacttccacatc	CRISPR spacer
aatctggatagtcatggtaacttctgcgga	Protospacer
   ***************.*****..*.  

31. spacer 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 9, identity: 0.7

ttgctggatagtcatggtgacttccacatc	CRISPR spacer
aatctggatagtcatggtaacttctgcgga	Protospacer
   ***************.*****..*.  

32. spacer 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 9, identity: 0.7

ttgctggatagtcatggtgacttccacatc	CRISPR spacer
aatctggatagtcatggtaacttctgcgga	Protospacer
   ***************.*****..*.  

33. spacer 3.9|773774|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 9, identity: 0.7

ttgctggatagtcatggtgacttccacatc	CRISPR spacer
aatctggatagtcatggtaacttctgcgga	Protospacer
   ***************.*****..*.  

34. spacer 3.11|773906|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to MH616991 (Microviridae sp. isolate ctbg483, complete genome) position: , mismatch: 9, identity: 0.7

ctacggcagtttctggctctacgtagagct	CRISPR spacer
aagcggcattttctggctctacgtggtttg	Protospacer
  .***** ***************.*  . 

35. spacer 3.17|774302|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 9, identity: 0.7

gccccggctcatttgccgccggcttgcata	CRISPR spacer
cccccggctcatatgccgccggaaggttgg	Protospacer
 *********** *********   *.  .

36. spacer 3.17|774302|30|NZ_CP049052|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 9, identity: 0.7

gccccggctcatttgccgccggcttgcata	CRISPR spacer
cccccggctcatatgccgccggaaggttgg	Protospacer
 *********** *********   *.  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 230386 : 247789 16 Planktothrix_phage(16.67%) NA NA
DBSCAN-SWA_2 269109 : 314531 42 Ralstonia_virus(13.33%) bacteriocin,protease,tRNA,transposase NA
DBSCAN-SWA_3 981087 : 1041728 49 Streptococcus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_4 1099307 : 1112697 13 Erwinia_phage(12.5%) tRNA,protease NA
DBSCAN-SWA_5 1264099 : 1272671 8 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 1550730 : 1573686 18 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_7 1631516 : 1701044 59 Ralstonia_virus(18.75%) protease,transposase NA
DBSCAN-SWA_8 1718155 : 1725008 7 Streptomyces_phage(42.86%) NA NA
DBSCAN-SWA_9 1787395 : 1848148 42 Ralstonia_virus(14.29%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage