CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP049107	Sphingomonas sp. MK52 chromosome, complete genome	0 crisprs	WYL,csa3,cas3,DEDDh	0	0	1	0

1. NZ_CP049107

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1584137 : 1591382	9	Escherichia_phage(50.0%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP049107|1584137:1591382|DBSCAN-SWA
TTCATGCGTCCTCCTCCTTCAGCGCCGCCGCCTCGGCGCGCAACGCGGCCCGATCGAGCTTGCCGTTCGCATTGCGCGGCAGCTCGGCCCGCCAGACGATCCGTGCCGGGTGCATGAATGATGGCAGGTTGCGTCGGAACCAGTCGCGGAGAAGCGTATCGGCCTCCGCGCCCGACGGCCGCGCATAGAGCAATATCGCCTGCCCCTGACGCTCGTCGGGCAGCCCGACGGCCACCGCCTCGGAGGTCGCACCGCTGGCGATCGCGGCCTCTTCTATCTCGGTCGGGCTGATGCGGTTTCCCGATACTTTGATCATCTCGTCGTCGCGGCCAATGAACCGCAGCAATCCCGCCGCATCGCGAGCCACCGTATCGCCCGACCAGACGGCTGTCCCGCCATGGATGGAGGCCGGCGGCGCCGGACGGAAGCGTAGCGCCGTTCGCTCGGCATCGCGCCAATAGCCTTGCGCGACGAGGGGGCCGGCGTGGACCAGTTCGCCTGGCTCGTCATCGTCGGCGATGCTGCCGTCGGGCCGCACGACGAGAATCTCCGCGAAGGGGATCGCCTTGCCGATCGAATCGGGATGCGCGTCAATCAGCGCAGGATCGAGATAAGTCGACCGGAACGCCTCGGTCAGGCCGTACATCGAAAAGAGGCGAGCGTCGGGAAACAGGCCCCGCAAGCGACGCACCAGCGAAAGACTCATCCGTCCCCCGGTGTTGGTCAGCCGCCGCAACGGAGCAATCGCTTCAGCCGGCCAGTCGGCCTCCGCCAGCTGGATCCACAGCGGGGGCACGCCCGCGAGCGTCGTGATCCCATGGCGCGCAACCGCGCGTACGACGTCGCGGGGAGTCAGATAATCGAGCGGATGGACGCAGCCGCCGGCGGCCCATGTCGACAGCAGCTGGTTCTGGCCATAGTCGAAGCTCAATGGCAGCACGGCCAGGGTTCGATCGTCCGGTTCCAGGCCGAGATAATGGGCGACCGAGATGGCACCGAGCCAGAGATTGGCGTGGCTCAGCATCACCCCTTTCGGCCGCCCCGTGGAACCCGAGGTGTAGAGGATCGCGGCAAGTTCGGAGGGGTCGGCGGCCGACGGAGGCAGTCGCTCGTCACCGGACAACAGGGCCGGCCCCTCCTCCTCCTCGATCGCCAGCGCGCAGTCCTCGGGCCGATCTCCCGGCTCCAGCGTGGCGGCCCGCCCGGTGCCGGCTATGAGCAGCCGGGCTCCGCTGTCGCTCAGAATGTGGGCGACCTGATGATGTTTGAGCTGCGGATTGACCGGAACATGAATCAGACCCGCCCGCGCGGCCGCGAGCGGCAGCAGGCAGGCGAGGCGGTTCTTGGCCATCCAGCTTCCCAGCCGGTCGCCTGGTCGCAGCCCGCGGGCCCGAAGCCCCGCCGCAAGCCGCGCCACCGCATCCTCGAGCCCCGCATGATCGAGCATTCCCGTCCTGTCGACGAGCGCCGGCGCCGATCGATCGCCGAGCAGGGCGAGGTGATCGAGCGGACGAGGAACGGGATCTGCGGCGACGGGCATCGGCCGACAGCTAGGGACTGGCGGGCGGATGGGCAACCGGCTGCGGACAATGCCTATCGGAATCTTGTTCCTGGCCGGCAATGCGTCTAGGGAGCCGCCATTTCCGAACCGGGAGGACGTGTCGACGTGAGCGCAGCCGATTTCGAGAGCACCGAGGATGCCGTCCGCGCCGTGCTCGCGGACAGCCTGTCGCTCGACGCCACCCGGGTGGCGGCTTTCGACACCGATACGGCGCTATTCGGTTCGCTGCCAGAGCTCGACTCGATGGCCGTGGCCGGCCTCCTCACCGCGCTGGAGGACCGGCTGGACATCATCATCGACGACGACGAAGTGGACGGCGAGATGCTCGAGAGTTTCGGAGCGCTGCTCGCCTTCGTGGAGCGAAAGATCAAGCGCTGAGGCGCTGCAGGGGCGAGCGGTTCAGCCATCTCGTCCCCGCCCCGACGGTTCGTTCCGACGCTCAGGCGTCTACCGACACCCGCGCCTCGAAATCTGCCTCGGCCAGGAAGCGCTCGGCATCGAGCGCCGCCATGCATCCCATGCCGGCCGCCGTCACCGCCTGTCGATAGACCTTGTCGGCGACGTCTCCGCAGCCGAACACGCCCGGCACATTGGTGCGCGTGCCGCCCTTCTCGACGACGAGATAGCCATCCTCGTCGAGATCGAGGTGGCCCCGGAACAATTCGGTCGATGGGCTATGGCCGATCGCAACAAACCCACCATCGGTTTCGAGCTGCGAGATCTCGCCCGTGACGCTATCCTTCAGTTCGATCGCCACCAGCCCGGCATTGCCTTCGCCGGCGACGAAGCGCTCGACCTGCTGGTTCCACATGACCTTGATATTGGGATGGGCGAACAGCCGCTCCTGCAGGATCTTCTCCGCGCGCAGGGAATCGCGACGGTGAATGAGCGTGACGTCATGGCTGTGATTTGTCAGGTACAGCGCCTCCTCGACCGCGGTGTTGCCGCCGCCGATAACCGCCACTTTCTTGCCGCGATAGAAGAAGCCGTCGCAGGTGGCGCAGGCGGAAACGCCCTTGCCGCCAAGTTCCATCTCGCCTTCGACACCAAGCCATTTCGCCTGCGCGCCCGTGGCGATGATCAGCGTATCGGCCACATAGAGCGTGCCGCCGTCGCCTTTGAGCCGGAAGGGCCGCTCGCTGAGATCGATGTCAACGATCATGTCCCAGACCATCGTCGCCCCGACATGCTCGGCCTGCGCCCGCATCTCCTCCATCAGCCACGGCCCCTGGATGACCTCGCGGAAGCCGGGATAATTTTCGACGTCGGTGGTGATGGTCAGCTGGCCGCCGGGCTGGATCCCCTGCACGACGATCGGCGACATGCCCGCGCGGGCGCCATAAATGGCAGCGGACAGGCCTGCGGGGCCGGAGCCGATGATCAACATGCGAGTCGAATGGGTAGCGGTCATGGCTGTCGTTCCGGTCGTGCAGAATGATTCTCGAATGCGCAGATAGGGACGCCTCCCCCGACTTGGCAACCGCCAGCCATTTACCCCCGCTTAGCTTTCCGACGCTAGCCCGGCGAAGACCACCAAAATGGACATGACGATGCGGCTACGGCAGGCGATCAAGACGATGCACGGGGATCGAAAGGGAAAGGGAGCGCTGCGCTTCGCGCTGGGCACCTGCCTGGTCGCCGTAGCGGTCGCCCTGACCGTTCCCGGACTCCTGTCACGCGGCGCGCTCGACAATCCGGTTTTCAAGCTTCGGCAGCATCTGCCGGCCGCTCTCGATCGGATCCGGGACGCGATGCAGGGCTGACGATACGCCTTCGGTCGCCCTCAGCCGGCCGACCTGCGAAACAGCTTGCCGAAGCGCGCACGGGCGTCGCGGTCGTCCTTGTCCTCCTGCTTCTCGCCCTCTTGCGCCCTCACCGCCGCCGTGGTCTCGCGCAGCCGTTCCGACAGGAAGACGGCCAGGGCCCGGTAGAAGCGCGCTGCGAAGACCGGCTCCTCATCGAACCGCTCCAGGATCAGCTTTCGGGGTATGGCGAGGACTTCGGCCGGCTCTTCGGCGATGACCGACACGAGTGGGGAATGCCGCTCGACGAAGGACATCTCGCCCACGACGTCGCCGACGCTGAGGCGGGCCACCTGCGTACCGTCGCGCAAGCGGACCGCCACCCGGCCGGCCAGCACGAAAAAAAGTTCGTTGACCGGCTTGCCCGCACTCACCAGCACATCGCCACGCTTGAGGCTTCGGAGACTGCCCACCGACAGCAGCCAGAGCATGTCGGCGTCGCTGAGACCGGCGGCAATGTAGCGGGCATTTTGCATCAGCGCTTTAGCACTTGATCCCGCAAATAAGTTCCATAGGCGCTCTTGCCGAGCGCGTGGGCAAGTCGTTCCAGCTGGCCGGCATCGATGAACCCCTGAAGATAGGCGACCTCCTCCAGGCAGGCGATCTTGAAGCCCTGCCGCTTCTCGAGCGTCCGGACGAACTCGGCCGCTTCGATCAGGCTGTCGGGCGTGCCGGTGTCGAGCCAGGCATAGCCACGTCCCATCAGTTCGACCGACAGCTTGCCGGCGGCGAGATAGGCCTTGTTGACGTCGGTGATCTCCAGCTCGCCGCGCGCGGACGGCTTCAGCGAGCGGGCGATCTCGACGACATCCGCGTCGTAGAAATAGAGCCCGGTAACCGCCCAGTTGGAGCGGGGGCGCTCCGGCTTCTCCTCGATCGACACCGCCCGCATGTCGGCATCGAACTCGACCACGCCATAACGCTCGGGATCGGTGACATGATAGGCGAAGACGGTCGCTCCGTCGGCCCGCGCTCCTGCCGAACGGAAAAGGTCGGTCGCGCCGTGCCCGTAATAGATATTGTCGCCCAGGATCAGCGCCGACCGGTCATTGCCCACGAAGTCGGCCCCGATGATATAGGCCTGCGCAAGTCCGTCGGGGCTGGGCTGGACCGCATAGCGGATGTCGATACCCCACTGGCTGCCATCGCCCAGCAGCGCCTGGAACGACGGGATGTCACGCGGGGTGGAGATCAGCAGGACCTCCCTTATGCCGGCGAGCATCAGCGTCGACAGCGGGTAATAGATCATCGGCTTGTCGTAGATCGGCAAGAGCTGCTTCGACGTCACCATCGTCATCGGGTGGAGCCGCGTTCCCGCGCCCCCTGCCAGGATTATCCCTTTCACGCGTCCGTCCCCTGGTTCCGGACCGGCGGCCCGAGCAGTTCCTCGATAATATCGTTCACGGCCAGCTGCCAGCGGCGCGGTTCGATCGCATAGGCGTTGCGAAGCGCCGCCGTCGACAGCCGAGAATTGGCCGGTCGCCTTGCAGGGGTGGGATAATCCGTCGTCGTGATCGCCTCGACTTCCGCAACCGGGCCCCCGCGCGCCGCGCTCAGCCTGAAGATTTCCCGGGCCAGTTCGCACCAGCTGGCCTCGCCCGCATTGACGAAATGCTGGACGCCGAACGGCGCCTGCGGATCCTCCATCATCCGAATGAGGATCGTCCGAACCGCTTCGGCGATATCGGCGGCAGCGGTCGGGCAACCCCGCTGATCATCGACCACCCGCAGACGAGGCGTGTTGGCCGCAACCCGAAGCATGGTCTTGAGGAAGTTGTTGCGGTGCGCCGAGAGAACCCATGCCGTGCGCAACACCAGAGCCGGTGCGCCGCCGGCCAGCACGGCGCGCTCGCCCGCAAGCTTGGAGGCGCCATAGACGCCGAGCGGCGCGACCGGATCGTCGATGTCATAGGGGTCGCTCTTGCTCCCGTCGAACACATAGTCGGTCGACAGATGGACGATCGGGACGCCCGCTTCGGCCAGCCAGCCGGGGGCCTCACCATTGACGCGAAAGGCAAGCTCAGATTCCTCCTCGGCCCGATCGACCGCCGTATAGGCGGCACAGTTGACGATCGCATCGACCGGATGCCTGTCGAAATAGCCGGCGACGCTGTGACGCGACGCGATGTCTAGCTCAGCGCGCGTCGGCAGCTGCACCTCGATCCCGTCGGGCCATGTCAGCCGTGCGATCTCGAGCCCGACCTGCCCCTGCCCCCCCGTTACGAGGATATGGCGCGTCATCCCGCAGCGAGACCCAGCCGCTGGGTCGCATAGCGGCCCGCGAGGATATCCTCCCACCAGGGCCGGTTCTCGAGATACCAGCGCACCGTCCGCTCGATACCTTCCTCGAACGAAACCTGCGGCTCCCAGCCGAGAACGTTGCGGATCTTGCTCGCATCGATCGCGTAACGCCGATCATGCCCCGGCCGGTCGGCAACGAAGCTGATCTGGTCGGCATAGCCATGACCGTCGCTGCGGGGATGCAGACGATCGAGCGCCGCACAGATCGACCGTACGACCTCAATGTTCCGGCGCTCCGAATTGCCGCCGACATTATAAGTCTCGCCCGGCGCGCCGCACTCGAAGACGGTGCGCAGCGCGCGGGCATGGTCCTCCACGTACAGCCAGTCGCGTATGTTCGAACCGTCGCCGTAAACAGGCAGGGCTTCGCCCGCGAGCGCGCGGATGATGATCAGTGGGATCAGCTTCTCGGGGAAATGATAGGGCCCGTAATTGTTCGAGCAATTGGTGACGAGCACCGGCAGGCCATAAGTATGCCCCCAGGCCCGCACGAGATGATCGGACCCGGCCTTCGAGGCCGAATAGGGCGAGCGCGGATCATAGGCCGTGCTCTCGGTGAACAGGCCCTCTTCGCCCAGCGAGCCGAAAACCTCGTCGGTCGAGATATGGTGAAAGCGAAAAGCTTCGCGCGCTTCGGGATCGAGCCCTCGCCAATAGGCCAGCGTCTGGTCGAGCAGCGTGTAGGTGCCGACGACATTCGTCTGGATGAAAGCCCCCGGGCCGTCGATCGACCGGTCGACGTGGCTTTCGGCGGCCAGATGCGCGACGACGTCGGGCCTGAACTCGGCGAGCAGCTTACGCACCAGCTCGGCGTCGCATATGTCGCCCTGCACGAAGCGGTAGCGGGGCGAATTGCCGACCGGAGCGAGCGAGCTCAGCACGCCGGCATAGGTCAGCTTGTCGAGATTGAGCACCTCATGCGTCGTCTCGCCGATGAGGTGGCGGATCAAGGCGGAACCGATGAAGCCGGCGCCGCCGGTGACCAGGATGCGCATCGTCACTCCTCCGAGAGCGGCCCGAGCGGCACGCCGTCATAGGCGAAGGGACTGGCCCAGCCCTCCAGCGGAGGCAAGGCCATATCCTTGGCGGACAGGACCGGCCCTTCGGGCGGCAGCGGCCAGTCTATGGCGAGCGTCGGACAGTTCCACGCAATGCCGCCGTCGGTTTCCGGCGCATAGACGTCCGAAACCTTGTAGCTGACCTCAGTGTCGGGTTCGAGCGTGACGAAGGCATGGCCAAAGCCGACCGGAATATAGAGCTGATCGCCATTGTCGGCGGACAGTTCGGCCGCGACATGCCGGCCGAACGTGGGGGATCCGGCGCGCAGATCGACCGCATAGTCGATTATCCGCCCACGAACGCATCGAACCAGCTTAGCCTGCGCGTGCGGGGGCGATTGGAAATGAATGCCGCGAAGGGTTCCGACGTGCCGCGAATAGCTGTGATTGTCCTGCACGAAGAGATCGGGAACACCGAGTTCCGCGAAGCGGTCCTGGCGGTATGTCTCGGAAAACCAACCACGATCATCGCCGAAGCGACGGGTCTTGATCAATCTGACGGGCAATATGCTGGCTCCTGTCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP049107|1584137:1591382|1587241_1587460_+|WP_165322551.1|DBSCAN-SWA
MTMRLRQAIKTMHGDRKGKGALRFALGTCLVAVAVALTVPGLLSRGALDNPVFKLRQHLPAALDRIRDAMQG
>NZ_CP049107|1584137:1591382|1590797_1591382_-|WP_165322556.1|DBSCAN-SWA
MTGASILPVRLIKTRRFGDDRGWFSETYRQDRFAELGVPDLFVQDNHSYSRHVGTLRGIHFQSPPHAQAKLVRCVRGRIIDYAVDLRAGSPTFGRHVAAELSADNGDQLYIPVGFGHAFVTLEPDTEVSYKVSDVYAPETDGGIAWNCPTLAIDWPLPPEGPVLSAKDMALPPLEGWASPFAYDGVPLGPLSEE
>NZ_CP049107|1584137:1591382|1585802_1586075_+|WP_165322549.1|DBSCAN-SWA
MSAADFESTEDAVRAVLADSLSLDATRVAAFDTDTALFGSLPELDSMAVAGLLTALEDRLDIIIDDDEVDGEMLESFGALLAFVERKIKR
>NZ_CP049107|1584137:1591382|1589736_1590795_-|WP_165322555.1|DBSCAN-SWA
MRILVTGGAGFIGSALIRHLIGETTHEVLNLDKLTYAGVLSSLAPVGNSPRYRFVQGDICDAELVRKLLAEFRPDVVAHLAAESHVDRSIDGPGAFIQTNVVGTYTLLDQTLAYWRGLDPEAREAFRFHHISTDEVFGSLGEEGLFTESTAYDPRSPYSASKAGSDHLVRAWGHTYGLPVLVTNCSNNYGPYHFPEKLIPLIIIRALAGEALPVYGDGSNIRDWLYVEDHARALRTVFECGAPGETYNVGGNSERRNIEVVRSICAALDRLHPRSDGHGYADQISFVADRPGHDRRYAIDASKIRNVLGWEPQVSFEEGIERTVRWYLENRPWWEDILAGRYATQRLGLAAG
>NZ_CP049107|1584137:1591382|1587480_1587975_-|WP_165322552.1|DBSCAN-SWA
MQNARYIAAGLSDADMLWLLSVGSLRSLKRGDVLVSAGKPVNELFFVLAGRVAVRLRDGTQVARLSVGDVVGEMSFVERHSPLVSVIAEEPAEVLAIPRKLILERFDEEPVFAARFYRALAVFLSERLRETTAAVRAQEGEKQEDKDDRDARARFGKLFRRSAG
>NZ_CP049107|1584137:1591382|1587974_1588844_-|WP_165322553.1|DBSCAN-SWA
MKGIILAGGAGTRLHPMTMVTSKQLLPIYDKPMIYYPLSTLMLAGIREVLLISTPRDIPSFQALLGDGSQWGIDIRYAVQPSPDGLAQAYIIGADFVGNDRSALILGDNIYYGHGATDLFRSAGARADGATVFAYHVTDPERYGVVEFDADMRAVSIEEKPERPRSNWAVTGLYFYDADVVEIARSLKPSARGELEITDVNKAYLAAGKLSVELMGRGYAWLDTGTPDSLIEAAEFVRTLEKRQGFKIACLEEVAYLQGFIDAGQLERLAHALGKSAYGTYLRDQVLKR
>NZ_CP049107|1584137:1591382|1584137_1585676_-|WP_165322548.1|DBSCAN-SWA
MPVAADPVPRPLDHLALLGDRSAPALVDRTGMLDHAGLEDAVARLAAGLRARGLRPGDRLGSWMAKNRLACLLPLAAARAGLIHVPVNPQLKHHQVAHILSDSGARLLIAGTGRAATLEPGDRPEDCALAIEEEEGPALLSGDERLPPSAADPSELAAILYTSGSTGRPKGVMLSHANLWLGAISVAHYLGLEPDDRTLAVLPLSFDYGQNQLLSTWAAGGCVHPLDYLTPRDVVRAVARHGITTLAGVPPLWIQLAEADWPAEAIAPLRRLTNTGGRMSLSLVRRLRGLFPDARLFSMYGLTEAFRSTYLDPALIDAHPDSIGKAIPFAEILVVRPDGSIADDDEPGELVHAGPLVAQGYWRDAERTALRFRPAPPASIHGGTAVWSGDTVARDAAGLLRFIGRDDEMIKVSGNRISPTEIEEAAIASGATSEAVAVGLPDERQGQAILLYARPSGAEADTLLRDWFRRNLPSFMHPARIVWRAELPRNANGKLDRAALRAEAAALKEEDA
>NZ_CP049107|1584137:1591382|1586136_1587108_-|WP_165322550.1|DBSCAN-SWA
MTATHSTRMLIIGSGPAGLSAAIYGARAGMSPIVVQGIQPGGQLTITTDVENYPGFREVIQGPWLMEEMRAQAEHVGATMVWDMIVDIDLSERPFRLKGDGGTLYVADTLIIATGAQAKWLGVEGEMELGGKGVSACATCDGFFYRGKKVAVIGGGNTAVEEALYLTNHSHDVTLIHRRDSLRAEKILQERLFAHPNIKVMWNQQVERFVAGEGNAGLVAIELKDSVTGEISQLETDGGFVAIGHSPSTELFRGHLDLDEDGYLVVEKGGTRTNVPGVFGCGDVADKVYRQAVTAAGMGCMAALDAERFLAEADFEARVSVDA
>NZ_CP049107|1584137:1591382|1588840_1589740_-|WP_165322554.1|DBSCAN-SWA
MTRHILVTGGQGQVGLEIARLTWPDGIEVQLPTRAELDIASRHSVAGYFDRHPVDAIVNCAAYTAVDRAEEESELAFRVNGEAPGWLAEAGVPIVHLSTDYVFDGSKSDPYDIDDPVAPLGVYGASKLAGERAVLAGGAPALVLRTAWVLSAHRNNFLKTMLRVAANTPRLRVVDDQRGCPTAAADIAEAVRTILIRMMEDPQAPFGVQHFVNAGEASWCELAREIFRLSAARGGPVAEVEAITTTDYPTPARRPANSRLSTAALRNAYAIEPRRWQLAVNDIIEELLGPPVRNQGTDA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165322548.1|1584137_1585676_-	acyl-CoA ligase (AMP-forming), exosortase A system-associated	A0A2K9KZV5	Tupanvirus	3.6e-23	25.7
WP_165322549.1|1585802_1586075_+	acyl carrier protein	NA	NA	NA	NA
WP_165322550.1|1586136_1587108_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.2e-70	47.0
WP_165322551.1|1587241_1587460_+	hypothetical protein	NA	NA	NA	NA
WP_165322552.1|1587480_1587975_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_165322553.1|1587974_1588844_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	7.1e-93	57.5
WP_165322554.1|1588840_1589740_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.5e-29	35.9
WP_165322555.1|1589736_1590795_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	3.3e-92	48.4
WP_165322556.1|1590797_1591382_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A1D8EQH2	Escherichia_phage	9.1e-28	41.1