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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043397 Leclercia adecarboxylata strain L21 chromosome, complete genome 7 crisprs DEDDh,csa3,WYL,RT,DinG,cas3 0 1 9 0

Results visualization

1. NZ_CP043397
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043397_1 2069434-2069564 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043397_2 3307425-3307543 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043397_3 3695948-3696036 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043397_4 3761103-3761195 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043397_5 3988860-3988949 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043397_6 4458776-4458916 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043397_7 4669555-4669652 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP043397_4 4.1|3761133|33|NZ_CP043397|CRISPRCasFinder 3761133-3761165 33 NZ_CP021765 Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence 196155-196187 6 0.818

1. spacer 4.1|3761133|33|NZ_CP043397|CRISPRCasFinder matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

caccccggctacgccagcacctggcgctgacag	CRISPR spacer
aagcccggctgcgccagcacctggcgcagcaag	Protospacer
 * *******.**************** *  **

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 56788 : 62609 9 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_2 567611 : 594811 21 Salmonella_phage(60.0%) transposase NA
DBSCAN-SWA_3 934021 : 993889 82 Cronobacter_phage(24.53%) integrase,tail,capsid,holin,head attL 981592:981627|attR 994006:994041
DBSCAN-SWA_4 1872453 : 1916042 52 Enterobacteria_phage(35.14%) integrase,tail,portal,protease,terminase,tRNA,capsid,head attL 1863589:1863603|attR 1892872:1892886
DBSCAN-SWA_5 2095720 : 2203613 106 Escherichia_phage(41.18%) tail,protease,terminase,tRNA,lysis,coat NA
DBSCAN-SWA_6 2277509 : 2291331 14 Escherichia_phage(11.11%) NA NA
DBSCAN-SWA_7 2916353 : 3009546 105 Shigella_phage(26.67%) integrase,tail,portal,transposase,plate,protease,terminase,tRNA,capsid,holin,head attL 2937022:2937038|attR 2999489:2999505
DBSCAN-SWA_8 3560947 : 3650316 91 Enterobacteria_phage(25.0%) transposase,tail,portal,protease,terminase,tRNA,lysis NA
DBSCAN-SWA_9 3725797 : 3733242 7 Mycobacterium_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage