CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045141	Kingella kingae strain F41215CHC chromosome, complete genome	1 crisprs	csa3,DEDDh,cas3,DinG,c2c9_V-U4,cas9,cas1,cas2	0	4	8	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045141_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045141_1

1572034-1572268

TypeII

Consensus_repeat	Method
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACC	PILER-CR
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACA	CRISPRCasFinder
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACC	CRT

3 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP045141_1

>merge|NZ_CP045141|1|1572034-1572268|PILER-CR,CRISPRCasFinder,CRT
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACTTATTACCGACTGCGATCGTTTTGTTTGCAATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACCGGCGTACACACCATTTCATCAGCTCGGTGATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACCGAATTTTTGGAATACCAAAAACAAGAGCCATTGTAGCATTGCGAAATGAGAAAGGGAGCTACACTC

>NZ_CP045141|1|1|1572034-1572202|PILER-CR
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACT	TATTACCGACTGCGATCGTTTTGTTTGCA
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACC	GGCGTACACACCATTTCATCAGCTCGGTG
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACC

>NZ_CP045141|1|1|1572034-1572265|CRISPRCasFinder
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACA	ACTTATTACCGACTGCGATCGTTTTGTTTGCA
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACA	ACCGGCGTACACACCATTTCATCAGCTCGGTG
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACA	ACCGAATTTTTGGAATACCAAAAACAAGAGCC
ATTGTAGCATTGCGAAATGAGAAAGGGAGCTACA

>NZ_CP045141|1|1|1572034-1572268|CRT
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACT	TATTACCGACTGCGATCGTTTTGTTTGCA
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACC	GGCGTACACACCATTTCATCAGCTCGGTG
ATTGTAGCATTGCGAAATGAGAAAGGGAACTACAACC	GAATTTTTGGAATACCAAAAACAAGAGCC
ATTGTAGCATTGCGAAATGAGAAAGGGAGCTACACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045141.1\|WP_032134027.1\|1583769_1585026_+\|lipoprotein-releasing-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274034
NZ_CP045141.1\|WP_003791335.1\|1564506_1565280_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP045141.1\|WP_003785234.1\|1578411_1579194_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP045141.1\|WP_164538294.1\|1563151_1564411_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|223810
NZ_CP045141.1\|WP_003791354.1\|1582490_1582799_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045141.1\|WP_164538293.1\|1559587_1561159_-\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP045141.1\|WP_032828185.1\|1565433_1567068_+\|FAD-dependent-5-carboxymethylaminomethyl-2-thiouridine(34)-oxidoreductase-MnmC	unknown	unknown	gnl\|CDD\|274478
NZ_CP045141.1\|WP_003791355.1\|1582804_1583443_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371245
NZ_CP045141.1\|WP_154700083.1\|1576973_1578236_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045141.1\|WP_019389501.1\|1562191_1563082_-\|3-deoxy-D-arabino-heptulosonate-7-phosphate-synthase	unknown	unknown	gnl\|CDD\|225431
NZ_CP045141.1\|WP_003785240.1\|1571643_1571970_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP045141.1\|WP_164538292.1\|1558950_1559523_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|239474
NZ_CP045141.1\|WP_038311238.1\|1570736_1571651_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP045141.1\|WP_003785259.1\|1561615_1561972_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045141.1\|WP_164538297.1\|1581731_1582469_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187576
NZ_CP045141.1\|WP_164538296.1\|1580018_1581251_+\|sugar-transferase	unknown	unknown	gnl\|CDD\|274398
NZ_CP045141.1\|WP_003791343.1\|1574584_1576762_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP045141.1\|WP_003791339.1\|1567479_1570662_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP045141.1\|WP_038311236.1\|1572350_1574315_-\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
NZ_CP045141.1\|WP_164538295.1\|1579197_1580022_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133038

Protein	Function_ID	Function_description	E-value
NZ_CP045141.1\|WP_032134027.1\|1583769_1585026_+\|lipoprotein-releasing-ABC-transporter-permease-subunit	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	1.44906e-170
NZ_CP045141.1\|WP_003791335.1\|1564506_1565280_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	2.19956e-126
NZ_CP045141.1\|WP_164538294.1\|1563151_1564411_-\|M23-family-metallopeptidase	gnl\|CDD\|223810	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane].	4.52411e-22
NZ_CP045141.1\|WP_164538293.1\|1559587_1561159_-\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP045141.1\|WP_032828185.1\|1565433_1567068_+\|FAD-dependent-5-carboxymethylaminomethyl-2-thiouridine(34)-oxidoreductase-MnmC	gnl\|CDD\|274478	TIGR03197, MnmC_Cterm, tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain. In Escherichia coli, the protein previously designated YfcK is now identified as the bifunctional enzyme MnmC. It acts, following the action of the heterotetramer of GidA and MnmE, in the modification of U-34 of certain tRNA to 5-methylaminomethyl-2-thiouridine (mnm5s2U). In other bacterial, the corresponding proteins are usually but always found as a single polypeptide chain, but occasionally as the product of tandem genes. This model represents the C-terminal region of the multifunctional protein. [Protein synthesis, tRNA and rRNA base modification].	6.35119e-117
NZ_CP045141.1\|WP_003785234.1\|1578411_1579194_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	7.75114e-130
NZ_CP045141.1\|WP_019389501.1\|1562191_1563082_-\|3-deoxy-D-arabino-heptulosonate-7-phosphate-synthase	gnl\|CDD\|225431	COG2876, AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism].	9.74638e-37
NZ_CP045141.1\|WP_003785240.1\|1571643_1571970_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	6.72723e-50
NZ_CP045141.1\|WP_164538292.1\|1558950_1559523_+\|carbonic-anhydrase	gnl\|CDD\|239474	cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	3.14091e-56
NZ_CP045141.1\|WP_038311238.1\|1570736_1571651_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	6.93341e-127
NZ_CP045141.1\|WP_164538297.1\|1581731_1582469_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187576	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4. Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.59459e-52
NZ_CP045141.1\|WP_164538296.1\|1580018_1581251_+\|sugar-transferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	2.1919e-101
NZ_CP045141.1\|WP_003791355.1\|1582804_1583443_+\|hypothetical-protein	gnl\|CDD\|371245	pfam10786, G6PD_bact, Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49). This family is conserved in Firmicutes and Proteobacteria. Several members are annotated as being glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) but this could not be confirmed.	3.20868e-54
NZ_CP045141.1\|WP_003791339.1\|1567479_1570662_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP045141.1\|WP_003791343.1\|1574584_1576762_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP045141.1\|WP_038311236.1\|1572350_1574315_-\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP045141.1\|WP_164538295.1\|1579197_1580022_+\|glycosyltransferase	gnl\|CDD\|133038	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.	8.00026e-103

>NZ_CP045141.1|WP_003785240.1|1571643_1571970_+|CRISPR-associated-endonuclease-Cas2
MSENQFMRIIVFFDLPVTSRAKRKAANDFRRFLVKDGYIRLQLSVYTRIVRGRDMLEKHHKRLCANLPKEGSVRCLEVTEKQFVAMKVLLGDKPTQEKRVNAQQFLLF
>NZ_CP045141.1|WP_038311238.1|1570736_1571651_+|type-II-CRISPR-associated-endonuclease-Cas1
MSWRSLLISKGGKLSLHNNQLLIAQQDGSHTVPLEDIAIIVVENRETVLTAPLLSALAQNGIGLLTCDEQFLPCGQWLPFAQYHRPLKTLNLQLNATLPQKKQLWQKIVRQKIINQSFVLNEMGADKAAERLLHFAEKVKSDDSDNQEAQAAAYYFQAAFGDEFTRQQENSLNAHLNYGYTILRSAVARALVQYGWLPALGLHHHNEQNPFNLADDVIEPFRPLVDLWVHTTTLSGSLQDELTPHNKQNLIQLLHYQMRWRGQIFTTLGAIDRSVASLQAALKEKDAQKLTLPELLSLKEHNYE
>NZ_CP045141.1|WP_003791339.1|1567479_1570662_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MAAKSLNYILGLDLGIASCGWAVVEMDEQENPLRLIDVGVRTFEEAENPKDGSSLAETRRLARAQRRLISRRANRMNKLCRLLKQENVLQANDYDEKGLIIGLPNQAWELRAQGLDRKLEPKEWAAVLIHLVKHRGYLSQRKNESQTADKELGALLSGMNHNHQLLQSQSNQYRTPAELAIKQFATQDGHIRNQRGAYTHTFNRLDLQNELNQLFDAQTRLGNPHVSGSLKTAINDLLMNQKAALSGDAILEMLGRCTFEPSEYKAAKNTYSAERFVWLGKLTNLRIQDNGLESALSREQRELLLNEPYNKTKLTYQQVRKLLRLPETAFFKGLRYGKDNAESATFMEMKSYHAIRKSLENKSLKSEWEKLKTQPKLLDLIGTAFSIYKTDDEIAGCLKNQLPENVIIALQGQLNFSNFMELSLKALEKLLPLMEQGLRYDEACTQIYGNRHEKIADKTEKFLPNIPADKLRNPVVLRTLTQARKVINAIIRRYGSPARVHIETGREVGKSFSDRDKLKKQQEENQEQRRRAIDEWKQFFPNAAHEPKAVDILKLRLYQLQQGKCLYSGLPIDVRRLPEKGYVEIDHALPFSRTWDDSFNNKILVLASENQNKGNQTPYEYLRGADNSESWRLFVENVQNCQFSPNKKQKIMAKQLDEKGFLERNLNDTRYVSRFLCQFISEHLHLTGKGKKRVFASNGQITALLRGRWGLSKNREENDRHHAVDAVVVACSTVAMQQKITQFVRYQKGNVFTGERIDKETGEVISIHFPTPWEHFREEVMIRVFDDNPLRTLPEKLPNRPEALHEYVMPLFVSRMPTRKMTGQGHKETIKSAKRLDEKISVLRVPLTQLKLNDLENMVNREREPALYEALKARLEQFKNDPAKAFAEPFFKQGGQQVKAVRVEIVQKSGMLLRKINGVADNGSMVRVDVFEKSGKFYLVPIYAWQVAEGILPNYAVVAHKDESDWILMDESYHFKFALYKNDLLEVQTKKGGIMGYFASLDRATGAITIREHDRDKKKCKDGEHRSIGVKMASSFKKLQVDELGKNIHETRSRKRPNIG
>NZ_CP045141.1|WP_032828185.1|1565433_1567068_+|FAD-dependent-5-carboxymethylaminomethyl-2-thiouridine(34)-oxidoreductase-MnmC
MTLNLPVYAWNVSPTWSQVVQFEQHNPHEKHVVWCVLPDSVPHYELTSPQNEYESSLHLAIQNALSCATTQAVHCVPNAWQNTHLWLIPQSQASSLHAHFSVPIQWQTEAIAPAPEVAPKAWQTPPAADYLDPSSLHILIIGAGIAGAATAYECAIRGAKVTVLEAQSQVAQAGSGNRQGLLYAKISPHATEQTELLLSGYGYTRHLLRQLLPEQATWQACGVLHLNHNAKEAERNRKLAQQTQHAHLYRAVSAQQASELAGICIEQDGLFWQQGAWLNPASLVQKLLSHPNITLHTNQRLIQADYDDAMWHVRSNTHTWQGSHLVFCTGASSLHTPIAQTLPLQIIRGQTSLVAANKSSLQLKIALSGASYISPAWQGEHCFGATFAPNCADDTWQSADEQHNRNELAQLNNTLYQSFSTLWNEPSSLHESSHGHAALRCDCHDHLPAVGALGDADAMRRVYAQYALDKNYRINTPCPYLPNAYINTAHGSRGLATAPLCAANIAAQIMNTPRLLSLRLRHALNPNRLIIKELVHGKVGAKSQ
>NZ_CP045141.1|WP_003791335.1|1564506_1565280_-|5'/3'-nucleotidase-SurE
MNILISNDDGYLSQGIALLARLAGEFANVRVVAPERDKSGTSNSLTLDKPLRIRTASNGFQFVNGTPTDCIHVGMHVLAQSDFKPDLVLSGVNHGANMGDDTVYSGTVAAATEAYLMGIPAVAFSLNSHRFDLFTETVEKAVWSVLSHIMQQPPTSPVLWNVNIPAVAVQDLCGIKVTRLGLRHHEQNVIESTDPRGAPIYWIGPAGEVRDNQADTDFAACDAGWISITPLQMDLTAHNQIDKLQAAWQDFRLQECP
>NZ_CP045141.1|WP_164538294.1|1563151_1564411_-|M23-family-metallopeptidase
MNTNKKTACLLLSLVAAAILSACSSAQQAPAPVVSGTNTGGYGYDNGTVTTPYGTVNTPYGTTGSPTDTANNPYNTAPYASAATATPSATPYTPAATTTPTAAPYTPATGTAYTPTASTGSTFIPNYSPVDKNASTHRVQAGDTVYNISKRYGISQEQLMQWNNLSGTTLSIGQTLRVKPVGSSSRTNAAPVTAAKTGTGSQHKVVAGDTVYNISKRYGISQEQLRQWNNLNGNNIQLGQVLRVSQSGRTTSTATTAAAAPYVPAKQPAPAAVTTTNTAAATTTATTPAVVATPTPVVASVRTQTKDGIVWQSPLPNGSVTQEFGTNRGMLIDGKGANAVAAADGQVIHIGALRNYGNLLIVQHSDQHLTAYAQIASALVQNGQKVVRGQPVATLGSNKLLFEVRSDGKAVNPTTYIPF
>NZ_CP045141.1|WP_019389501.1|1562191_1563082_-|3-deoxy-D-arabino-heptulosonate-7-phosphate-synthase
MIIVMQATAQDEDVQRVVQTIRQQGLSEHISRGKECTIIGAVGDERVFDIAQIEALPQVERAIRIVQDWRIISREAWAQDTQITVRGMALGGHSGIRKIQAIAQTDASSLHLNADSDAALFDPFYTPANPYARAGCFSLENTTQTLHDISQICRQNNKIIVMRIRDSAHLEVALSVQADILYLGGELLANRSLLQEVGSLNIPTIVCKENHHRVRDWLVAAEQIVLRGNQHVILGDAGTLSLHGEPLRLDVDALVAAKKLSHLPVLANISQLAHRHMDKQTLWALACAAQVDAIIV
>NZ_CP045141.1|WP_003785259.1|1561615_1561972_+|hypothetical-protein
MNYDKTVSEMLNVDGALAAAVVDYSSGMLLAGGGSAAIDLEIAAAGNTEVMRAKMKTMGMLGLKDNIEDILITLGKQYHLLRPLAKHDGLFLYSVLDRSKSNLALARRSLVDAENNLN
>NZ_CP045141.1|WP_164538293.1|1559587_1561159_-|glutamine-hydrolyzing-GMP-synthase
MTNQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKSFNPKGVILSGGPNSVYESDYQADVGLFDLGVPVLGICYGMQFMAHHLGGEVSAGNQREFGYAQVKTIDCELTRGINDGTPNMLDVWMSHGDKVSKLPTGFAVIGDTPSCSIAMMEHAEKQFYGIQFHPEVTHTKQGKALLNRFVLDICGAKPSWTMPNYIEEAIVKIREQVGNEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKNVMDMFARNLGVKVVHIDATEQFMGKLAGVTDPEQKRKIIGAEFVEVFDAEEKKLTNAKWLAQGTIYPDVIESAGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHPFPGPGLGVRILGEVKREYADLLRRADDIFIEELRNTIDEQSGKSWYDLTSQAFAVFLPVKSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGKVSNRIINEIKGINRVVYDVSGKPPATIEWE
>NZ_CP045141.1|WP_164538292.1|1558950_1559523_+|carbonic-anhydrase
MSELNHILQHNQSFVDSGAYEHFLTNKYPERKLAILSCMDTRMVELLPAALGLRNGDVKLIKNAGAVVTHPWGSVMRSLLVAVLELRVEEIMVIAHYDCGMRGLNAQAFLAKAEEQGVPEDRITTLRHAGIDLDNWLTGFDSVEDSVRHTVSLIRKHPLMPANIAVHGLVIHPVTGKLTVVVHGDESCTI
>NZ_CP045141.1|WP_038311236.1|1572350_1574315_-|RNA-polymerase-sigma-factor-RpoD
MSNQHFQDNDTDDNTLDDSRPLTPEEQRERLRRLIMLGKERGYITYAEINDSLPDDMSDAEQIDGIVNMIQSLGIQVTEEAPDADALLMNDNSTGITDDDAVAEAEAALSQADSEFGRTTDPVRMYMREMGQVELLTREDEIKIAKEIENALKNMIQAISACPGSVGEILELIEQIKKDEIRVDEVVEAIIDPNEVLLNELGLGHLESSLQSDNDAATDSDDSSDESDEDDDSDSGDAGSMDNQQNLEELKAEVLEHFKQIEKSYGLMIRALDKNDSKHAKYLEHRNNIAQKLLEVRFSTRQIEKLSDNLRSRVEQIRKLEREIRDICLDRVRMDREYFIEQFMPNATYLEWIDEEVAKNRVWSEALGRFKHAILEKQTEMAALEAHARISIAELKDISKNMVKSEKETAAAKQKMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQYLQETGEEPDSAKLAELMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDVNNVAPADAAMYSSLREVTSDILESLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDKLKSFLDSEEGK
>NZ_CP045141.1|WP_003791343.1|1574584_1576762_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MNPAHLQDYLDYANNQPAPEQKLLQAALKLAQTHYPDDAVTTSAHEPLLQHLLQAALMVRDMDLLAEAVAATLLTDISTYCTDWKTQVSEQCGQAVATLVAGIDEVQKLTHFAKVDALATPEERANQAETMRKMLLAMVSDIRVVLIKLALRTRSMQYLSQTPDSPQKRALAKETLDIFAPLANRLGVWQLKWQLEDLGFRHYNPEEYKRIAKLLDEKRTERLEYIEQFLSSLQTAVNQAGIQCDVAGRPKHIYSIYKKMVKKKLDFDGLYDIRAVRVLVNSVSECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVGPEDKGIEVQIRTHEMHEFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPAGATPIDFAYALHSNLGDRCRGAKVNGQIVPLSTPLENGQRVEIIAAKEGVPSVNWLHEGWVKSNKAISKIRAYIRQQNAEAIREDGKNQFDKAIAKINPKPNHQQLCEKLGFKHLDDLFTAVGQGEVSPHAIQKAAGVLNEPPPVPISETSIVKKSKIQSGGKNGVLVGGEGGLLTNLAKCCKPAPPDLIVGFVTRDKGVSIHRQGCADFEHLATQSPEKVMTASWAGIDAGQMFAIDIEVRAQDRNGLLRDVSDALARHKVNVTAVHTQTRDLEASMRFTLEVKKVDELPRVLASLAEVKGVSGVMRL
>NZ_CP045141.1|WP_154700083.1|1576973_1578236_+|hypothetical-protein
MRLTHSALALALAFSFGNFAHANTLACSNSYGFRVDVSGNTGATVCSNTSSDLIDLVKDFSLSNSGYTQSSAAFAVGRINDVDFTASYAANSNDLVFNAPDLGIENKVFTGATRKKAQDAFEDWVKHSGIIGDMMRYQSKHSAASPITGAAGIMPTMAATDFNTEIQSVSNIATTPSSSTDNKESTTNADATPINNLIGTGVSIGSFSNNGERINSYTLPLSYSIGTGDDSRQQLIISVPLTMYTIGKAKGYHAGVGIAHRFPITQNWTLTPGIRYALTGSVDRATIASVTSASLTSTYHIPFEQFDLNIANMIGYYRTGKFKAGDYSFDPDIKQTMLRNGVMLSQPITLGSQQLAIEYSLIDTRYIGGQKPFMRDMQEFGVTLGTHRNNNSHQSFLRAGVSYIRAKDNNGFTFNFGYWF
>NZ_CP045141.1|WP_003785234.1|1578411_1579194_+|tryptophan-synthase-subunit-alpha
MSRIAQTFAQLGKRKALIPYITVGDPNLATTVQLMHSMAQAGASILELGVPFSDPMADGPTIQRAVERALANHVSLHDVLNVVREFRQSNQHTPVVLMGYLNPIHKMGYEAFAQAAAEAGVDGVLTVDSPIEHIAPLQEALKSRGVDCIFLIAPTTTEARMQEIAKRASGFVYYVSLKGVTGSAQLDTQAVADKIAVLRQHIHIPIGVGFGIHDANSAAQIAQVADAVIVGSCIVKQIEEHGSNAPQAVGDLVRELVAAI
>NZ_CP045141.1|WP_164538295.1|1579197_1580022_+|glycosyltransferase
MPTQYAPFSVLMSLYEREQPAFLNQCLSSLHTQTCLADEIVIVLDGNITPQLQAALDDWATRLPLRVLPLSHNVGLGKALNHGLAHCQHDWVFRMDTDDIAAPHRFERQLAYLATHPNVALLGAQIAEFTQSPEQAYGNRRVPESHQQIQQFSQKRNPFNHMTIAYRKSAVQQAGGYQHHWFMEDYNLWLRMLAQNVQAANLPDVLVYARTGTNMVQRRRGWQYVQSEWQLYKLKRQLRLQAPLAAVFCLLQRTLPRLLPTFLLQHLYTWLRRT
>NZ_CP045141.1|WP_164538296.1|1580018_1581251_+|sugar-transferase
MKPTPSLFIRLLTGIVLAAITTGLYLFFKDINPLNSKVINSNLISLLAYTLAAISINKLLYFPGKQSWLHILPAVGLSYSSVFGMSAVFFITFSNSFVITNGILATAFFVGDFIRRNRHIPHIAYIPIGRASQAQQIPHVNWIELQQPVLPQSSLQSVVADLHSPDLTPEWQKFLAACTLRGIPVYNIRQIQESLTGRVQIHHMYENDLGSLLPSPAYMLVKRLLDIVCVLCALPFALPLMLLTAIAIRLESSGSVLFTQNRVGQGGREFRIYKFRSMSQDSEKDGAKLAQVGDSRITQVGHFIRKTRLDELPQFFNILKGDMSLIGPRPEQKVFVEQFEQSIAFYNYRHIVKPGLSGWAQVTQGYAGNEDETRVKIEHDFYYIKHFSLSLDLLIVFKTIKIILTGFGAR
>NZ_CP045141.1|WP_164538297.1|1581731_1582469_+|SDR-family-NAD(P)-dependent-oxidoreductase
MKISVLIIGMGFVGRALAESLYQQNIAVGAIKRHLTSDDVNLPIALDAADLNHPVWQAHWANYTTWVLLLPPSAMADYAATVAWWVQQGQRVGVQHWIYGSSVGVFGATQGVCDERTVPTPSTESGKKVQAAEQLLLNSGATNVDIVRLGGLYAAERHPLYSLLRREMPLSGGNAVANMIHRDAAVATLVQAALSPNGCRIMHAVEQPALCKRDFYAREAKKLGQPAPVWLDDAPASAKQIISTT
>NZ_CP045141.1|WP_003791354.1|1582490_1582799_+|hypothetical-protein
MDWCQIFLHCMIWVVGVVVVCVGLWLVVMIPIMLITAFVGLIYGSIPLFLPFLPPFWATLASSSNDNKKKGFDWGDKTEADRHRDLVEHIRIQQMNEDRHRR
>NZ_CP045141.1|WP_003791355.1|1582804_1583443_+|hypothetical-protein
MQQPILTAWHCDTLNQPFYQFAQMKQFAPDSIETVKAHYRVAWTDWKQFVQQVQAALQASGLPIGATHIERWCNGWQVRAHLFAFFKLAGHEHDAPILSLILNRQNLIVSLDWHAYRAAKSNSTVGQYHGYLAQLAHANWHDWHIWRGKDSEYATHPLVGEKQPAHYSWREGDDFYRIGKTLSRDELAQHDCVAWTAQHLQQLAQLYARCFD
>NZ_CP045141.1|WP_032134027.1|1583769_1585026_+|lipoprotein-releasing-ABC-transporter-permease-subunit
MVSLETWIGLRYLRAKKRSGFMSFISVMSIVGIALGVIALIVVLSVVNGFQKEIRGQLLNIAPHAEVGHIVTGENATQTWQSLQQKFAGKPQVLATAPYVAGQGLIANSGEVRGIQLRGILPEQEKSVVDFANKMSAGSFDDLKADEFSIILGSGLAQILGAEVGGKVTVITPEGNVTPAGVVPRLKQFSVVGIVKTGVDEADNSMALIHLADAQKLYRLDDAMIGLRLKLADPQNAPAVMQTLLPESERTNLWTQNWTDNNRSYFNAVEMEKRMLTLLLTCIIVVAVFNLVSSLVMAVNEKQSDIAILRTLGLSPRGVMKIFVVQGMVSGVLGTLTGLVLGLLLAWKIGAIIAQIEQWFGVQFVSSQVYFINYLPSDIQTSDVIGVVSISLILSLLATLYPSWSASRTQPAEALRYE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045141_1	1.1\|1572071\|29\|NZ_CP045141\|PILER-CR,CRT	1572071-1572099	29	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	511959-511987	6	0.793
NZ_CP045141_1	1.6\|1572203\|29\|NZ_CP045141\|CRT	1572203-1572231	29	MK250029	Prevotella phage Lak-C1, complete genome	129227-129255	6	0.793
NZ_CP045141_1	1.6\|1572203\|29\|NZ_CP045141\|CRT	1572203-1572231	29	MK250016	Prevotella phage Lak-A1, complete genome	168971-168999	6	0.793
NZ_CP045141_1	1.6\|1572203\|29\|NZ_CP045141\|CRT	1572203-1572231	29	MK250019	Prevotella phage Lak-A2, complete genome	92036-92064	6	0.793
NZ_CP045141_1	1.3\|1572068\|32\|NZ_CP045141\|CRISPRCasFinder	1572068-1572099	32	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	511959-511990	8	0.75
NZ_CP045141_1	1.5\|1572200\|32\|NZ_CP045141\|CRISPRCasFinder	1572200-1572231	32	MK250029	Prevotella phage Lak-C1, complete genome	129224-129255	8	0.75
NZ_CP045141_1	1.5\|1572200\|32\|NZ_CP045141\|CRISPRCasFinder	1572200-1572231	32	MK250016	Prevotella phage Lak-A1, complete genome	168968-168999	8	0.75
NZ_CP045141_1	1.5\|1572200\|32\|NZ_CP045141\|CRISPRCasFinder	1572200-1572231	32	MK250019	Prevotella phage Lak-A2, complete genome	92033-92064	8	0.75

1. spacer 1.1|1572071|29|NZ_CP045141|PILER-CR,CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 6, identity: 0.793

tattaccgactgcgatcgttttgtttgca	CRISPR spacer
cagtcccgacagcgatagttttgtttgcc	Protospacer
.* * ***** ***** ***********

2. spacer 1.6|1572203|29|NZ_CP045141|CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 6, identity: 0.793

gaatttttggaataccaaaaacaagagcc	CRISPR spacer
taatctttggaagaccaaaaacaaatggc	Protospacer
 ***.******* ***********. * *

3. spacer 1.6|1572203|29|NZ_CP045141|CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 6, identity: 0.793

gaatttttggaataccaaaaacaagagcc	CRISPR spacer
taatctttggaagaccaaaaacaaatggc	Protospacer
 ***.******* ***********. * *

4. spacer 1.6|1572203|29|NZ_CP045141|CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 6, identity: 0.793

gaatttttggaataccaaaaacaagagcc	CRISPR spacer
taatctttggaagaccaaaaacaaatggc	Protospacer
 ***.******* ***********. * *

5. spacer 1.3|1572068|32|NZ_CP045141|CRISPRCasFinder matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 8, identity: 0.75

acttattaccgactgcgatcgttttgtttgca	CRISPR spacer
ccacagtcccgacagcgatagttttgtttgcc	Protospacer
 * .* * ***** ***** ***********

6. spacer 1.5|1572200|32|NZ_CP045141|CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 8, identity: 0.75

accgaatttttggaataccaaaaacaagagcc	CRISPR spacer
atgtaatctttggaagaccaaaaacaaatggc	Protospacer
*.  ***.******* ***********. * *

7. spacer 1.5|1572200|32|NZ_CP045141|CRISPRCasFinder matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 8, identity: 0.75

accgaatttttggaataccaaaaacaagagcc	CRISPR spacer
atgtaatctttggaagaccaaaaacaaatggc	Protospacer
*.  ***.******* ***********. * *

8. spacer 1.5|1572200|32|NZ_CP045141|CRISPRCasFinder matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 8, identity: 0.75

accgaatttttggaataccaaaaacaagagcc	CRISPR spacer
atgtaatctttggaagaccaaaaacaaatggc	Protospacer
*.  ***.******* ***********. * *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

184764 : 192920

Diachasmimorpha_longicaudata_entomopoxvirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032133158.1\|184764_186135_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.5e-54	34.0
WP_019389768.1\|186315_187788_-	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	3.2e-21	27.7
WP_003789136.1\|187944_188274_-	YnfA family protein	A0A218MNG8	uncultured_virus	1.8e-20	48.0
WP_003787243.1\|188689_189655_-	PhoH family protein	H6X2N1	Pseudomonas_phage	1.4e-46	47.6
WP_003789141.1\|189717_190599_-	patatin-like phospholipase family protein	A0A1V0SKV5	Klosneuvirus	2.1e-07	28.2
WP_038329615.1\|190819_191827_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_003789144.1\|192035_192920_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	2.5e-21	26.5

DBSCAN-SWA_2

283220 : 341580

Bacillus_phage(15.38%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003789330.1\|283220_284000_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_003789332.1\|284127_284598_+	universal stress protein	NA	NA	NA	NA
WP_003789334.1\|284946_285507_+	elongation factor P	NA	NA	NA	NA
WP_003789336.1\|285565_286741_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
WP_038310466.1\|286749_287052_-	DUF1049 domain-containing protein	NA	NA	NA	NA
WP_038310468.1\|287221_288166_+	branched-chain amino acid transaminase	NA	NA	NA	NA
WP_164538041.1\|288465_290391_-	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.9e-152	51.7
WP_003789345.1\|290760_291870_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	9.3e-114	60.3
WP_003785358.1\|292020_292227_-	bacterioferritin	NA	NA	NA	NA
WP_164538363.1\|292398_294609_+	UvrD-helicase domain-containing protein	S5MMD7	Bacillus_phage	1.9e-73	31.5
WP_003789349.1\|294843_295971_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	8.4e-46	33.1
WP_003785363.1\|295975_296278_+	hypothetical protein	NA	NA	NA	NA
WP_003789351.1\|296293_296608_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_003785368.1\|296639_296903_+	membrane protein	NA	NA	NA	NA
WP_003789353.1\|296922_297387_+	DUF559 domain-containing protein	NA	NA	NA	NA
WP_003789355.1\|297434_297671_+\|transposase	DDE transposase family protein	NA	NA	NA	NA
WP_164538042.1\|297735_298221_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_003789361.1\|299535_302748_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_003789364.1\|302911_303385_+	hypothetical protein	NA	NA	NA	NA
WP_003789367.1\|303542_304019_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_003789369.1\|304099_306241_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	8.4e-188	52.7
WP_003785378.1\|306365_306881_-	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_003789372.1\|306892_307201_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003789374.1\|307310_307523_-	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	5.1e-13	60.0
WP_003789376.1\|307623_308013_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_003789379.1\|308072_309248_-	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_038310477.1\|309473_310226_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_051291710.1\|310366_311950_+	inorganic phosphate transporter	E5ESL8	Bathycoccus_sp._RCC1105_virus	8.2e-39	29.7
WP_164538043.1\|312229_313723_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_026036370.1\|313783_314083_-	hypothetical protein	NA	NA	NA	NA
WP_003789394.1\|314159_314972_-	glutamate racemase	NA	NA	NA	NA
WP_003785398.1\|315180_316140_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_038310479.1\|316214_316838_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA
WP_164538044.1\|317283_317676_+	ribosome silencing factor	NA	NA	NA	NA
WP_164538045.1\|317691_318675_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_038312148.1\|318677_319148_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_003785405.1\|319152_320256_+	peptide chain release factor 2	NA	NA	NA	NA
WP_164538046.1\|320325_320817_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_042949159.1\|320829_321276_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	3.8e-26	47.2
WP_019390311.1\|321902_322364_+	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_164538047.1\|322551_324204_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	5.0e-79	34.9
WP_003789410.1\|324319_325012_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_164538048.1\|325154_326597_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_164538049.1\|326611_327178_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.1e-21	34.8
WP_003789415.1\|327183_328071_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
WP_164538050.1\|328151_328580_-	hypothetical protein	NA	NA	NA	NA
WP_003789418.1\|328664_329237_-	hypothetical protein	NA	NA	NA	NA
WP_003785433.1\|331519_331810_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_003785435.1\|331868_333224_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_003789424.1\|333385_334111_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.2e-23	27.4
WP_003785439.1\|334285_334801_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_038310486.1\|334784_335357_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_038310487.1\|335353_335893_-	HAD family hydrolase	NA	NA	NA	NA
WP_003789428.1\|336003_336186_+	Trm112 family protein	NA	NA	NA	NA
WP_003785443.1\|336182_336941_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_164538051.1\|337024_338323_-	adenylosuccinate synthase	A0A0B5J049	Pandoravirus	1.2e-59	33.3
WP_164538052.1\|338484_339126_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_003789438.1\|339379_339604_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_003789867.1\|340817_341081_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	5.7e-06	32.9
WP_003792284.1\|341217_341580_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

557280 : 624335

Paenibacillus_phage(30.0%)

terminase,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164538089.1\|557280_558036_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.1e-12	35.5
WP_003792189.1\|558371_558635_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-06	32.9
WP_164538090.1\|558683_559325_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_003792195.1\|559465_561778_-	TonB-dependent receptor	NA	NA	NA	NA
WP_164538089.1\|562539_563295_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.1e-12	35.5
WP_003790867.1\|563484_564816_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_003790863.1\|564829_565660_-	hypothetical protein	NA	NA	NA	NA
WP_032828169.1\|565887_566298_+	hypothetical protein	NA	NA	NA	NA
WP_003790858.1\|566410_566800_-	adenosylmethionine decarboxylase	A0A1D7SEZ2	Cyanophage	7.9e-12	41.8
WP_155238050.1\|566796_566949_-	hypothetical protein	NA	NA	NA	NA
WP_003790857.1\|566952_568467_-	DUF4178 domain-containing protein	NA	NA	NA	NA
WP_038314728.1\|568482_568722_-	hypothetical protein	NA	NA	NA	NA
WP_026036294.1\|568787_569156_-	hypothetical protein	NA	NA	NA	NA
WP_003787860.1\|569274_569718_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003790848.1\|569792_570731_+	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_003790846.1\|570933_572337_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_038308333.1\|578481_578733_-\|transposase	transposase	NA	NA	NA	NA
WP_032133957.1\|578778_579108_-	1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA	NA	NA	NA
WP_038311210.1\|579190_579946_-	hypothetical protein	NA	NA	NA	NA
WP_003790837.1\|580710_581421_-	SCO family protein	NA	NA	NA	NA
WP_003790835.1\|581434_583105_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
WP_003784990.1\|583125_583815_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA
WP_038311208.1\|583811_584630_-	shikimate dehydrogenase	NA	NA	NA	NA
WP_003784993.1\|584769_585330_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.3e-33	43.8
WP_003784995.1\|585547_586393_+	class II glutamine amidotransferase	NA	NA	NA	NA
WP_019390385.1\|586436_587153_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_164538368.1\|587223_587781_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_154699901.1\|587806_588319_+	peptidyl-prolyl cis-trans isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	2.0e-10	32.7
WP_154699902.1\|588399_588648_+	glutaredoxin family protein	NA	NA	NA	NA
WP_050792394.1\|588701_589667_-	signal peptidase I	NA	NA	NA	NA
WP_019390382.1\|589768_590650_-	DMT family transporter	NA	NA	NA	NA
WP_003790823.1\|590839_591700_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_038303929.1\|591763_592174_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_032133950.1\|592201_592804_-	TIGR00730 family Rossman fold protein	A0A1D8KU27	Synechococcus_phage	1.6e-19	36.6
WP_003785013.1\|592818_593433_-	hypothetical protein	NA	NA	NA	NA
WP_038311197.1\|593634_594942_-	DUF2868 domain-containing protein	NA	NA	NA	NA
WP_003790814.1\|594947_595601_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_003790813.1\|595867_597133_+	RsmB/NOP family class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_038311195.1\|598440_599208_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_003786250.1\|599416_599599_-	hypothetical protein	NA	NA	NA	NA
WP_003790809.1\|599879_600446_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_032133911.1\|600568_601597_-	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	5.0e-45	35.0
WP_038330060.1\|601984_602839_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_038320910.1\|602850_603450_-	outer membrane lipoprotein LolB	NA	NA	NA	NA
WP_164538091.1\|603660_605784_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003790800.1\|605884_606919_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003790799.1\|607057_608353_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003786266.1\|608532_609330_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_038311188.1\|609453_611097_-	lactate permease LctP family transporter	NA	NA	NA	NA
WP_003790794.1\|611236_612688_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_003790791.1\|612684_613383_-	lactate utilization protein C	NA	NA	NA	NA
WP_003786276.1\|613379_614147_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_003790789.1\|614655_615228_-	hypothetical protein	NA	NA	NA	NA
WP_003790786.1\|615310_615955_-	adenylate kinase	NA	NA	NA	NA
WP_164538092.1\|616327_618799_+	hypothetical protein	NA	NA	NA	NA
WP_164538093.1\|619038_621117_+	LysM peptidoglycan-binding domain-containing protein	A0A0A0RVE6	Bacillus_phage	7.5e-08	36.0
WP_003790780.1\|621201_621762_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_003790778.1\|623054_624335_+\|terminase	terminase	E5FFI8	Burkholderia_phage	6.3e-98	46.8

DBSCAN-SWA_4

1008956 : 1047794

Moraxella_phage(14.29%)

protease,tRNA,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003790578.1\|1008956_1009400_-	phage virion morphogenesis protein	A0A0U5KRJ7	unidentified_phage	4.5e-19	42.5
WP_003792210.1\|1010578_1011094_+\|tail	phage major tail tube protein	NA	NA	NA	NA
WP_003792208.1\|1011231_1011519_+\|tail	phage tail assembly protein	Q6QIA8	Burkholderia_phage	1.3e-06	41.9
WP_003792207.1\|1011571_1011685_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_164538113.1\|1011687_1011876_-	hypothetical protein	NA	NA	NA	NA
WP_003792203.1\|1011924_1012146_+	hypothetical protein	NA	NA	NA	NA
WP_003792202.1\|1012368_1013235_+\|tail	phage tail tape measure protein	A0A1W6JT50	Escherichia_phage	6.2e-49	62.6
WP_144005598.1\|1013329_1013755_+	hypothetical protein	A0A0R6PGL8	Moraxella_phage	4.7e-26	50.8
WP_164538158.1\|1013896_1014334_+	DNA adenine methylase	A0A2H4JHL6	uncultured_Caudovirales_phage	3.7e-34	50.7
WP_080571764.1\|1014567_1015233_+	KpsF/GutQ family sugar-phosphate isomerase	A0A0A0Q3B9	Pectobacterium_bacteriophage	1.1e-05	60.9
WP_038310639.1\|1015312_1016926_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_164538159.1\|1017163_1017868_-\|transposase	IS1 family transposase	A0A218MNG1	uncultured_virus	2.4e-30	48.8
WP_003790168.1\|1018121_1018286_-	DUF1330 domain-containing protein	NA	NA	NA	NA
WP_038310880.1\|1018494_1020408_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	1.4e-122	36.6
WP_003786175.1\|1020587_1020758_-	hypothetical protein	NA	NA	NA	NA
WP_164538160.1\|1020754_1021348_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003786173.1\|1021461_1021635_-	hypothetical protein	NA	NA	NA	NA
WP_134793899.1\|1021890_1023318_-	sodium:proton antiporter	NA	NA	NA	NA
WP_003786171.1\|1023464_1024310_-	PHP domain-containing protein	NA	NA	NA	NA
WP_019389073.1\|1024472_1025813_-	GTPase/DUF3482 domain-containing protein	A0A0R6PKQ1	Moraxella_phage	3.8e-85	45.0
WP_019389074.1\|1025918_1026401_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_003790159.1\|1026582_1027767_+	PilT/PilU family type 4a pilus ATPase	NA	NA	NA	NA
WP_003790157.1\|1027849_1028605_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_003790154.1\|1028619_1029150_+	lipoprotein	NA	NA	NA	NA
WP_164538161.1\|1029159_1029555_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_003790151.1\|1029582_1029912_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
WP_003790149.1\|1029983_1030304_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_003786162.1\|1030355_1030559_+	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA
WP_038310885.1\|1030560_1031067_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_003786159.1\|1031063_1031828_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	2.7e-27	33.5
WP_032828152.1\|1034978_1035272_+	membrane protein	NA	NA	NA	NA
WP_032828151.1\|1035211_1035502_+	helicase	NA	NA	NA	NA
WP_038329025.1\|1035759_1037676_+	TonB-dependent receptor	NA	NA	NA	NA
WP_032133640.1\|1037712_1038687_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_038310892.1\|1038764_1039562_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_038310894.1\|1039562_1040255_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-18	31.2
WP_038310896.1\|1040247_1041369_+	membrane protein	NA	NA	NA	NA
WP_003786138.1\|1041407_1042187_-	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_042226781.1\|1042265_1042538_-	2Fe-2S ferredoxin-like protein	G9IAA2	Pseudomonas_phage	1.0e-13	54.8
WP_038310898.1\|1042549_1043038_-	hypothetical protein	NA	NA	NA	NA
WP_134793715.1\|1043232_1044483_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	6.0e-93	45.2
WP_164538162.1\|1044565_1046065_-	DUF853 family protein	A0A248XCZ8	Klebsiella_phage	4.2e-77	42.5
WP_003786130.1\|1046115_1046463_-	hypothetical protein	NA	NA	NA	NA
WP_164538163.1\|1046465_1047794_-\|protease	metalloprotease PmbA	NA	NA	NA	NA

DBSCAN-SWA_5

1300113 : 1384577

100

Burkholderia_phage(21.05%)

plate,tail,tRNA,transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003789756.1\|1300113_1301004_-\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
WP_003789755.1\|1301172_1302498_-	phosphate regulon sensor histidine kinase PhoR	A0A1V0SGX0	Hokovirus	5.6e-17	27.2
WP_003789754.1\|1302502_1303198_-	response regulator	NA	NA	NA	NA
WP_003789753.1\|1303190_1304063_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA
WP_003789752.1\|1304078_1304579_-	hypothetical protein	NA	NA	NA	NA
WP_003789750.1\|1304578_1305361_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.6e-56	49.8
WP_164538215.1\|1305541_1306600_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_003789747.1\|1306688_1306874_-	hypothetical protein	NA	NA	NA	NA
WP_100215675.1\|1307011_1307149_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003789744.1\|1307225_1307480_+	hypothetical protein	NA	NA	NA	NA
WP_038310675.1\|1307521_1309576_+\|tRNA	methionine--tRNA ligase	NA	NA	NA	NA
WP_038310673.1\|1309665_1312068_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_003785725.1\|1312110_1313139_-	hemoglobin-haptoglobin-utilization protein A	NA	NA	NA	NA
WP_032828141.1\|1313535_1314672_-	carboxypeptidase family protein	NA	NA	NA	NA
WP_003785715.1\|1314847_1315696_+	iron permease	NA	NA	NA	NA
WP_164538216.1\|1315717_1316899_+	iron uptake system protein EfeO	NA	NA	NA	NA
WP_164538217.1\|1317038_1318304_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
WP_164538218.1\|1318471_1320184_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_164538219.1\|1320563_1321958_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_164538220.1\|1321957_1322422_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_164538221.1\|1322485_1323892_+	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_003785706.1\|1323972_1324896_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_038310624.1\|1324908_1325667_+	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA
WP_019390456.1\|1325680_1327024_+	cell division protein FtsA	NA	NA	NA	NA
WP_003785703.1\|1327239_1328430_+	cell division protein FtsZ	NA	NA	NA	NA
WP_032133285.1\|1328501_1329038_+	isochorismatase family protein	NA	NA	NA	NA
WP_003785701.1\|1329101_1329716_-	riboflavin synthase	A0A1V0SE20	Indivirus	5.6e-20	38.5
WP_060537150.1\|1329718_1331836_-	AsmA family protein	NA	NA	NA	NA
WP_111694427.1\|1331967_1332345_-	DUF2147 domain-containing protein	NA	NA	NA	NA
WP_003789695.1\|1332449_1333640_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	2.0e-37	32.6
WP_003789694.1\|1333651_1334659_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_003789692.1\|1334761_1335394_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
WP_155238407.1\|1335427_1336186_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_038329652.1\|1336185_1336815_-	DNA mismatch repair protein MutS	NA	NA	NA	NA
WP_038329654.1\|1336820_1337900_-\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
WP_164538222.1\|1338161_1338716_+	sel1 repeat family protein	NA	NA	NA	NA
WP_003789682.1\|1338718_1339618_+	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_003789680.1\|1340042_1340528_-	NYN domain-containing protein	A0A0R6PGY5	Moraxella_phage	4.7e-22	39.6
WP_003789679.1\|1340610_1341591_-	glycosyltransferase	NA	NA	NA	NA
WP_164538223.1\|1341587_1342547_-	alpha-2,3-sialyltransferase	NA	NA	NA	NA
WP_038315033.1\|1342557_1342878_-	hypothetical protein	NA	NA	NA	NA
WP_003789673.1\|1342900_1343188_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_003789672.1\|1343196_1344501_-	replication protein A	R4JJS4	Burkholderia_phage	4.7e-32	47.9
WP_003789670.1\|1344666_1345803_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	4.1e-117	55.5
WP_164538224.1\|1345970_1346225_+	hypothetical protein	NA	NA	NA	NA
WP_003785659.1\|1346257_1347427_-	phage late control protein	A4PE54	Ralstonia_virus	3.3e-77	45.6
WP_164538225.1\|1347411_1347879_-\|tail	phage tail protein	A0A077K9Y7	Ralstonia_phage	4.1e-23	44.5
WP_164538226.1\|1347975_1350051_-\|tail	phage tail tape measure protein	V5YUN9	Pseudomonas_phage	9.7e-40	32.1
WP_003789661.1\|1350047_1350242_-	hypothetical protein	NA	NA	NA	NA
WP_164538227.1\|1350195_1351188_-\|tail	phage tail protein	F1BUU3	Erwinia_phage	8.6e-79	51.0
WP_164538228.1\|1351659_1352097_-	DNA adenine methylase	A0A2H4JHL6	uncultured_Caudovirales_phage	2.6e-35	52.1
WP_164538073.1\|1352117_1352714_-\|tail	phage tail protein	NA	NA	NA	NA
WP_164538229.1\|1352726_1354127_-	hypothetical protein	A0A0S4L0Z9	Pseudomonas_phage	8.3e-11	38.5
WP_164538230.1\|1354127_1354706_-\|tail	phage tail protein	Q6QI98	Burkholderia_phage	3.9e-47	51.8
WP_164538231.1\|1354698_1355838_-\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	4.1e-56	38.2
WP_164538232.1\|1355834_1356209_-\|plate	phage baseplate protein	NA	NA	NA	NA
WP_032133917.1\|1356350_1356941_-\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_164538233.1\|1356924_1358034_-	hypothetical protein	Q6QIA2	Burkholderia_phage	1.1e-66	44.9
WP_003785084.1\|1358033_1358252_-	membrane protein	A0A067ZJB1	Vibrio_phage	1.6e-06	40.9
WP_164538234.1\|1358248_1359148_-\|tail	phage tail protein	NA	NA	NA	NA
WP_164538235.1\|1359147_1361811_-\|tail	phage tail tape measure protein	D5LGY4	Escherichia_phage	2.9e-113	41.1
WP_032133961.1\|1361859_1362048_+	hypothetical protein	NA	NA	NA	NA
WP_003792207.1\|1362049_1362163_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_164538236.1\|1362215_1362497_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_164538237.1\|1362630_1363146_-\|tail	phage major tail tube protein	NA	NA	NA	NA
WP_003785078.1\|1363161_1364553_-\|tail	phage tail protein	A4JWK5	Burkholderia_virus	3.3e-100	44.8
WP_095063400.1\|1364562_1365063_-	hypothetical protein	Q6QIB2	Burkholderia_phage	3.7e-22	33.8
WP_095063401.1\|1365063_1365489_-	DUF1320 domain-containing protein	A0A0M3LP98	Mannheimia_phage	3.6e-10	31.9
WP_164538238.1\|1365492_1365711_-	hypothetical protein	NA	NA	NA	NA
WP_164538239.1\|1365714_1366047_-	DUF2190 family protein	NA	NA	NA	NA
WP_003785071.1\|1366095_1367028_-	hypothetical protein	A4JWK0	Burkholderia_virus	6.3e-55	42.6
WP_164538240.1\|1367043_1368135_-	2-oxoacid:acceptor oxidoreductase	Q6QIB7	Burkholderia_phage	2.5e-55	36.6
WP_003785065.1\|1368369_1368720_-	transcriptional regulator	Q6QIE8	Burkholderia_phage	1.3e-16	42.1
WP_003785061.1\|1369855_1370464_-	DUF3164 family protein	A0A0M3LQ92	Mannheimia_phage	9.4e-44	45.8
WP_134793649.1\|1370450_1370882_-	hypothetical protein	NA	NA	NA	NA
WP_164538241.1\|1370878_1371376_-	hypothetical protein	A0A2H4JFV8	uncultured_Caudovirales_phage	2.9e-27	41.6
WP_003785057.1\|1371372_1371540_-	hypothetical protein	NA	NA	NA	NA
WP_164538242.1\|1371597_1371750_-	hypothetical protein	NA	NA	NA	NA
WP_095063181.1\|1371751_1372930_-	AAA family ATPase	A4JWN1	Burkholderia_virus	1.1e-107	51.6
WP_164538243.1\|1372932_1374723_-\|transposase	transposase family protein	Q6QIE0	Burkholderia_phage	1.7e-149	48.0
WP_164538244.1\|1374729_1375602_-	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	2.3e-43	38.7
WP_019389002.1\|1375636_1375927_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_019389003.1\|1375938_1376115_-	DNA-binding protein	NA	NA	NA	NA
WP_134793695.1\|1376235_1376529_+	hypothetical protein	NA	NA	NA	NA
WP_134793696.1\|1376587_1376824_+	hypothetical protein	NA	NA	NA	NA
WP_134793697.1\|1376833_1377295_+	hypothetical protein	NA	NA	NA	NA
WP_164538245.1\|1377402_1377915_+	TIGR02594 family protein	A0A1L2C8R8	Pseudomonas_phage	5.7e-58	61.8
WP_003785039.1\|1377928_1378102_+	hypothetical protein	NA	NA	NA	NA
WP_003785037.1\|1378104_1378266_+	hypothetical protein	NA	NA	NA	NA
WP_003785035.1\|1378268_1378529_+	hypothetical protein	NA	NA	NA	NA
WP_164538246.1\|1378518_1378674_+	hypothetical protein	NA	NA	NA	NA
WP_164538247.1\|1378684_1378858_+	hypothetical protein	NA	NA	NA	NA
WP_003785029.1\|1378850_1379057_+	TraR/DksA family transcriptional regulator	V5USD3	Shigella_phage	1.0e-10	55.7
WP_003785028.1\|1379049_1379373_+	hypothetical protein	Q6QIC4	Burkholderia_phage	1.2e-10	40.2
WP_003785025.1\|1379369_1379675_+	hypothetical protein	A0A2H4JGU5	uncultured_Caudovirales_phage	4.0e-27	60.4
WP_003785024.1\|1379676_1380222_+	DUF3486 family protein	A4JWJ3	Burkholderia_virus	2.9e-36	47.5
WP_164538248.1\|1380218_1381724_+	hypothetical protein	A4JWJ4	Burkholderia_virus	1.7e-198	66.7
WP_164538249.1\|1381754_1383251_+	DUF935 family protein	A4JWJ5	Burkholderia_virus	5.4e-109	45.2
WP_164538250.1\|1383240_1384149_+\|capsid	minor capsid protein	A0A0M4UTA3	Ralstonia_phage	4.4e-61	46.2
WP_164538251.1\|1384145_1384577_+	phage virion morphogenesis protein	A0A0U5KRJ7	unidentified_phage	3.7e-18	39.9

DBSCAN-SWA_6

1457817 : 1506578

Pseudomonas_phage(22.22%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003787488.1\|1457817_1458657_+\|protease	protease HtpX	NA	NA	NA	NA
WP_003791157.1\|1458715_1459405_-	JAB domain-containing protein	NA	NA	NA	NA
WP_019389565.1\|1459478_1459913_-	META domain-containing protein	NA	NA	NA	NA
WP_032133984.1\|1460264_1462841_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	3.8e-118	32.5
WP_164538265.1\|1462977_1463865_+	transferrin-binding protein-like solute binding protein	NA	NA	NA	NA
WP_003791165.1\|1463942_1464410_-	DUF4149 domain-containing protein	NA	NA	NA	NA
WP_003787475.1\|1464518_1465304_-	cytochrome c1	NA	NA	NA	NA
WP_003791167.1\|1465317_1466670_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA
WP_038304023.1\|1466687_1467272_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
WP_003791169.1\|1467508_1468030_-	single-stranded DNA-binding protein	A0A291LA01	Bordetella_phage	2.6e-34	63.6
WP_164538266.1\|1468032_1469418_-	MFS transporter	NA	NA	NA	NA
WP_032828289.1\|1469559_1470783_-	sugar MFS transporter	NA	NA	NA	NA
WP_164538267.1\|1471044_1473750_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_003787459.1\|1473893_1474337_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_038311280.1\|1474403_1475372_+	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_032828178.1\|1475352_1476228_+	RNase adapter RapZ	A0A1P8D5W0	Corynebacterium_phage	2.0e-07	30.8
WP_003791185.1\|1476480_1477731_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.2e-96	51.9
WP_003791186.1\|1479696_1480572_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_003791188.1\|1480790_1481768_+	malate dehydrogenase	NA	NA	NA	NA
WP_003787443.1\|1481840_1482329_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_003791190.1\|1482316_1483093_-	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_003791194.1\|1483527_1484685_+	PLP-dependent transferase	S4VRH6	Pandoravirus	7.4e-13	26.9
WP_003791195.1\|1484803_1485664_+	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA
WP_164538268.1\|1485984_1487817_-	phosphogluconate dehydratase	NA	NA	NA	NA
WP_003791200.1\|1488055_1489033_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_003787426.1\|1489155_1489548_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA
WP_003787424.1\|1489591_1489861_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_038311273.1\|1489863_1491600_+	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	1.7e-08	27.3
WP_003787419.1\|1491669_1492437_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_003791205.1\|1492439_1492805_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_003789355.1\|1493808_1494045_+\|transposase	DDE transposase family protein	NA	NA	NA	NA
WP_164538080.1\|1494072_1494594_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_032828290.1\|1495927_1496245_+	DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003791212.1\|1496338_1496635_+	putative addiction module antidote protein	NA	NA	NA	NA
WP_003791215.1\|1496736_1497456_+	hypothetical protein	NA	NA	NA	NA
WP_003791217.1\|1497607_1497808_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_164538269.1\|1498429_1498606_+	hypothetical protein	NA	NA	NA	NA
WP_164538270.1\|1498657_1498993_+	hypothetical protein	NA	NA	NA	NA
WP_003791221.1\|1499110_1499302_+	hypothetical protein	NA	NA	NA	NA
WP_003791223.1\|1499304_1499637_+	hypothetical protein	NA	NA	NA	NA
WP_003791225.1\|1499633_1499879_+	hypothetical protein	NA	NA	NA	NA
WP_164538271.1\|1499881_1500946_+	hypothetical protein	A0A0H5AWB1	Pseudomonas_phage	1.5e-23	26.4
WP_003791234.1\|1501046_1501403_+	hypothetical protein	NA	NA	NA	NA
WP_003791236.1\|1501407_1503174_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.7e-72	32.3
WP_003791238.1\|1503304_1503583_+	XRE family transcriptional regulator	A0A2D1GR59	Pseudomonas_phage	3.3e-12	52.9
WP_003791240.1\|1503937_1504270_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_003785327.1\|1505042_1505531_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_164538272.1\|1505814_1506297_-\|transposase	transposase	NA	NA	NA	NA
WP_164538273.1\|1506274_1506460_-\|transposase	transposase	NA	NA	NA	NA
WP_164538274.1\|1506413_1506578_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1834186 : 1883230

Bacillus_phage(27.27%)

tRNA,integrase,transposase

attL 1831182:1831206|attR 1843364:1843388

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1831182:1831206	attL	NA	NA	NA	NA
WP_003792297.1\|1834186_1834975_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_003792114.1\|1834904_1835393_-	toxin-activating lysine-acyltransferase	NA	NA	NA	NA
WP_003788049.1\|1835682_1837110_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_003792113.1\|1837190_1839317_-	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	8.7e-44	27.7
WP_164538334.1\|1839627_1839795_-	hypothetical protein	NA	NA	NA	NA
WP_003789098.1\|1839931_1840195_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-06	32.9
WP_164538335.1\|1840245_1840887_-\|transposase	IS1 family transposase	A0A218MNG1	uncultured_virus	2.4e-29	48.0
WP_003788060.1\|1842119_1842623_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_003792109.1\|1842635_1843352_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
WP_164538336.1\|1843427_1844708_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
1843364:1843388	attR	NA	NA	NA	NA
WP_032133022.1\|1844851_1845277_-	hypothetical protein	NA	NA	NA	NA
WP_038319793.1\|1845434_1846901_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	3.7e-94	42.7
WP_164538337.1\|1846963_1847398_-	hypothetical protein	NA	NA	NA	NA
WP_164538338.1\|1847372_1847585_-	excalibur calcium-binding domain-containing protein	NA	NA	NA	NA
WP_164538339.1\|1847690_1848098_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003792106.1\|1848545_1849346_+	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_164538340.1\|1849446_1852224_-	DNA polymerase I	A0A218MKQ4	uncultured_virus	6.6e-60	29.7
WP_003788074.1\|1852329_1852524_-	hypothetical protein	NA	NA	NA	NA
WP_080571763.1\|1853224_1853899_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003792103.1\|1853987_1856366_-	phosphoketolase family protein	NA	NA	NA	NA
WP_003792102.1\|1856513_1857059_-	hypothetical protein	NA	NA	NA	NA
WP_003788083.1\|1857051_1857258_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003792101.1\|1857398_1858187_-	5'-nucleotidase, lipoprotein e(P4) family	NA	NA	NA	NA
WP_003792100.1\|1858311_1861041_-	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	4.8e-95	31.4
WP_003792099.1\|1861179_1862547_+	signal recognition particle protein	NA	NA	NA	NA
WP_003792098.1\|1862673_1863999_+	MFS transporter	NA	NA	NA	NA
WP_003792284.1\|1864401_1864764_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_003789098.1\|1864900_1865164_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-06	32.9
WP_019390349.1\|1866190_1866553_-	hypothetical protein	NA	NA	NA	NA
WP_038310391.1\|1866822_1868778_-	bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase	NA	NA	NA	NA
WP_003792093.1\|1868997_1869189_+	DNA gyrase inhibitor YacG	NA	NA	NA	NA
WP_164538341.1\|1869175_1869784_+	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	3.0e-26	42.9
WP_019390346.1\|1869898_1870834_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.5e-28	34.6
WP_003792090.1\|1871001_1871958_+	L-lactate dehydrogenase	NA	NA	NA	NA
WP_003792088.1\|1872035_1872446_-	hypothetical protein	NA	NA	NA	NA
WP_164538342.1\|1872705_1875489_+\|tRNA	isoleucine--tRNA ligase	L7Y3E1	Megavirus	2.1e-74	25.4
WP_032828320.1\|1875569_1877420_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.4e-29	27.0
WP_003792084.1\|1877583_1879785_-	TonB-dependent receptor	NA	NA	NA	NA
WP_143449209.1\|1880139_1882143_+	recombinase	NA	NA	NA	NA
WP_080571754.1\|1882368_1882629_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_003788129.1\|1883047_1883230_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1951865 : 1999279

Agrobacterium_phage(14.29%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038302661.1\|1951865_1952330_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_038302659.1\|1952441_1953119_-	ComF family protein	NA	NA	NA	NA
WP_038302657.1\|1953117_1953861_+	pimeloyl-ACP methyl ester esterase BioH	NA	NA	NA	NA
WP_003791957.1\|1953928_1954243_-	hypothetical protein	NA	NA	NA	NA
WP_003788553.1\|1954288_1954918_-	endonuclease III	NA	NA	NA	NA
WP_003788550.1\|1954914_1956135_-	capsular biosynthesis protein	NA	NA	NA	NA
WP_003788548.1\|1956167_1956716_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	A0A223VZK2	Agrobacterium_phage	2.8e-10	31.7
WP_050855123.1\|1956753_1957254_-	DUF1304 family protein	NA	NA	NA	NA
WP_003791953.1\|1957258_1957870_-	GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	4.0e-42	45.5
WP_032132963.1\|1957919_1958402_-	lipoprotein signal peptidase	NA	NA	NA	NA
WP_003788541.1\|1958721_1958943_+	50S ribosomal protein L31	NA	NA	NA	NA
WP_003788540.1\|1959026_1959440_+	membrane protein	NA	NA	NA	NA
WP_038310358.1\|1959451_1959922_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_003791944.1\|1959966_1960611_-	membrane protein	NA	NA	NA	NA
WP_003791941.1\|1960585_1960993_-	DUF4878 domain-containing protein	NA	NA	NA	NA
WP_003791940.1\|1961211_1963071_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_164538384.1\|1963166_1963874_+	restriction endonuclease	NA	NA	NA	NA
WP_003791934.1\|1963870_1965058_+	DNA cytosine methyltransferase	M1PSQ0	Streptococcus_phage	6.3e-60	38.2
WP_003791928.1\|1965251_1965755_+	hypothetical protein	NA	NA	NA	NA
WP_164538080.1\|1966159_1966681_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_003789355.1\|1966708_1966945_-\|transposase	DDE transposase family protein	NA	NA	NA	NA
WP_164538385.1\|1967212_1968220_-	thiamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003791918.1\|1969703_1972451_-	lactoferrin/transferrin family TonB-dependent receptor	NA	NA	NA	NA
WP_164538348.1\|1972546_1974301_-	transferrin-binding protein-like solute binding protein	NA	NA	NA	NA
WP_003789097.1\|1975085_1975436_-\|transposase	transposase	NA	NA	NA	NA
WP_003789098.1\|1975689_1975953_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-06	32.9
WP_003791909.1\|1976158_1977790_+	hypothetical protein	NA	NA	NA	NA
WP_164538349.1\|1977933_1979760_+	protein-disulfide reductase DsbD	NA	NA	NA	NA
WP_038310350.1\|1979931_1981194_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_164538350.1\|1981399_1983454_+	adhesin	NA	NA	NA	NA
WP_038304754.1\|1983593_1984292_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_038307311.1\|1984342_1985680_+	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA
WP_032828196.1\|1986034_1986658_-	YdcF family protein	NA	NA	NA	NA
WP_144005571.1\|1986659_1987010_-	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_003791891.1\|1987165_1988539_+	hypothetical protein	NA	NA	NA	NA
WP_003791890.1\|1988935_1990450_+	sodium-dependent transporter	NA	NA	NA	NA
WP_019390239.1\|1990442_1990550_+	methionine/alanine import family NSS transporter small subunit	NA	NA	NA	NA
WP_003791888.1\|1990641_1991367_+	hypothetical protein	NA	NA	NA	NA
WP_002642891.1\|1991420_1991576_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_003788491.1\|1991593_1991830_-	50S ribosomal protein L28	NA	NA	NA	NA
WP_164538386.1\|1992047_1992740_-	phosphoesterase	A0A2H5BGP7	Vibrio_virus	4.2e-24	36.7
WP_003791883.1\|1992726_1993098_-\|transposase	IS1 transposase	A0A218MNG1	uncultured_virus	8.1e-14	48.6
WP_164538388.1\|1993207_1993648_+	hypothetical protein	NA	NA	NA	NA
WP_164538387.1\|1994522_1995215_+	site-specific DNA-methyltransferase	A0A1B0XVP8	Campylobacter_phage	1.6e-31	64.2
WP_164538389.1\|1998595_1999279_-\|transposase	IS1595 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage