CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP049258	Nordella sp. HKS 07 chromosome, complete genome	8 crisprs	csa3,WYL,cas8e,cas7,cas5,cas6e,cas3,DEDDh,DinG,cse2gr11,csf2gr7,casR	2	39	1	0

1. NZ_CP049258

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP049258_1

• CRISPR_ID: NZ_CP049258_1
• CRISPR_location: 1444504-1444579
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP049258_1

Consensus_repeat	Method
CGTGGGCCTGGCGGTGACAGCGGCG	CRISPRCasFinder

spacers of NZ_CP049258_1

>1.1|1444529|26|NZ_CP049258|CRISPRCasFinder
TCAACAGCGGCGGCGCACCCGATGGC

CRISPR arrays and Neighbor proteins around NZ_CP049258_1

CRISPR arrays

The CRISPR arrays of NZ_CP049258_1

>merge|NZ_CP049258|1|1444504-1444579|CRISPRCasFinder
CGTGGGCCTGGCGGTGACAGCGGCGTCAACAGCGGCGGCGCACCCGATGGCCGCGGGCCTGGCGGTGGCGTCCCCG

>NZ_CP049258|1|1|1444504-1444579|CRISPRCasFinder
CGTGGGCCTGGCGGTGACAGCGGCG	TCAACAGCGGCGGCGCACCCGATGGC
CGCGGGCCTGGCGGTGGCGTCCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049258.1|WP_165165501.1|1436648_1436903_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165173901.1|1442856_1443384_+|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl|CDD|223149
NZ_CP049258.1|WP_165166792.1|1442049_1442343_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165166788.1|1439362_1440355_-|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|176258
NZ_CP049258.1|WP_165166806.1|1455179_1455365_+|Trm112-family-protein	unknown	unknown	gnl|CDD|225391
NZ_CP049258.1|WP_165166794.1|1443678_1444152_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165166802.1|1451518_1452334_+|ribokinase	unknown	unknown	gnl|CDD|238579
NZ_CP049258.1|WP_165166807.1|1455357_1455711_+|DUF971-domain-containing-protein	unknown	unknown	gnl|CDD|226066
NZ_CP049258.1|WP_165173899.1|1437903_1439112_-|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl|CDD|143636
NZ_CP049258.1|WP_165166798.1|1445616_1448937_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|274846
NZ_CP049258.1|WP_165166804.1|1453563_1454493_+|thioredoxin	unknown	unknown	gnl|CDD|225660
NZ_CP049258.1|WP_165166800.1|1449884_1450262_+|MFS-transporter	unknown	unknown	gnl|CDD|340913
NZ_CP049258.1|WP_165166783.1|1433893_1434616_+|MFS-transporter	unknown	unknown	gnl|CDD|340913
NZ_CP049258.1|WP_165166786.1|1436987_1437833_+|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NZ_CP049258.1|WP_165166790.1|1440977_1441412_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165166785.1|1435137_1436550_+|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl|CDD|236430
NZ_CP049258.1|WP_165166801.1|1450494_1451475_+|TIM-barrel-protein	unknown	unknown	gnl|CDD|131679
NZ_CP049258.1|WP_165166799.1|1449371_1449719_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165166805.1|1454499_1455171_+|LON-peptidase-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|225362
NZ_CP049258.1|WP_165166803.1|1452927_1453425_+|prolyl-tRNA-synthetase-associated-domain-containing-protein	unknown	unknown	gnl|CDD|239827

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP049258.1|WP_165173901.1|1442856_1443384_+|Hsp20/alpha-crystallin-family-protein	gnl|CDD|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	2.92609e-36
NZ_CP049258.1|WP_165166798.1|1445616_1448937_-|AAA-family-ATPase	gnl|CDD|274846	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein. This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein. [Cellular processes, Toxin production and resistance].	3.49126e-120
NZ_CP049258.1|WP_165166788.1|1439362_1440355_-|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl|CDD|176258	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP049258.1|WP_165166807.1|1455357_1455711_+|DUF971-domain-containing-protein	gnl|CDD|226066	COG3536, COG3536, Uncharacterized protein conserved in bacteria [Function unknown].	9.3394e-48
NZ_CP049258.1|WP_165173899.1|1437903_1439112_-|adenylate/guanylate-cyclase-domain-containing-protein	gnl|CDD|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	7.15037e-43
NZ_CP049258.1|WP_165166805.1|1454499_1455171_+|LON-peptidase-substrate-binding-domain-containing-protein	gnl|CDD|225362	COG2802, COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease [General function prediction only].	9.58184e-60
NZ_CP049258.1|WP_165166804.1|1453563_1454493_+|thioredoxin	gnl|CDD|225660	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones].	5.30447e-99
NZ_CP049258.1|WP_165166800.1|1449884_1450262_+|MFS-transporter	gnl|CDD|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.41953e-10
NZ_CP049258.1|WP_165166783.1|1433893_1434616_+|MFS-transporter	gnl|CDD|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.99801e-25
NZ_CP049258.1|WP_165166786.1|1436987_1437833_+|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	2.44567e-14
NZ_CP049258.1|WP_165166802.1|1451518_1452334_+|ribokinase	gnl|CDD|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	3.73416e-67
NZ_CP049258.1|WP_165166785.1|1435137_1436550_+|oxygen-independent-coproporphyrinogen-III-oxidase	gnl|CDD|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
NZ_CP049258.1|WP_165166801.1|1450494_1451475_+|TIM-barrel-protein	gnl|CDD|131679	TIGR02631, Xylose_isomerase, xylose isomerase, Arthrobacter type. This model describes a D-xylose isomerase that is also active as a D-glucose isomerase. It is tetrameric and dependent on a divalent cation Mg2+, Co2+ or Mn2+ as characterized in Arthrobacter. Members of this family differ substantially from the D-xylose isomerases of family TIGR02630.	3.20471e-20
NZ_CP049258.1|WP_165166806.1|1455179_1455365_+|Trm112-family-protein	gnl|CDD|225391	COG2835, COG2835, Uncharacterized conserved protein [Function unknown].	5.40595e-24
NZ_CP049258.1|WP_165166803.1|1452927_1453425_+|prolyl-tRNA-synthetase-associated-domain-containing-protein	gnl|CDD|239827	cd04335, PrdX_deacylase, This CD includes bacterial (Agrobacterium tumefaciens and Caulobacter crescentus ProX, and Clostridium sticklandii PrdX) and eukaryotic (Plasmodium falciparum N-terminal ProRS editing domain) sequences. The C. sticklandii PrdX protein, a homolog of the YbaK and ProX proteins, and the prolyl-tRNA synthetase-editing domain (ProRS-INS), specifically hydrolyzes Ala-tRNA(Pro). In this CD, many of the eukaryotic editing domains are N-terminal and cis-acting, expressed from a multidomain ProRS, however, similar to the bacterial PrdX, the mammalian, amphibian, and echinoderm PrdX-like proteins are trans-acting, single-domain proteins.	5.78703e-72

Protein sequences

>NZ_CP049258.1|WP_165166794.1|1443678_1444152_+|hypothetical-protein
MQAMLANMMKIYNMRVATRACGCATFAAVLVVSIGTAHAGSNTARDDFQALCAECHNADARGNGPLTKNLTKIPPDLTRIKQRAHGKFDKQAVYDWILGLKMTGSHGTREMPIWGDWLMDEALEDGTSLDAAKAAERKIERRVMEIVKYLESLQVEE
>NZ_CP049258.1|WP_165173901.1|1442856_1443384_+|Hsp20/alpha-crystallin-family-protein
MTQTVTKLPVAKEETQRQDAAPWRPLLGLQHEINQIFDQFDRGWRPFLHHSIFDFEPRARFEASWSSPAVDIVDKDKAYEVTAEVPGMNADNLEVKLTNDLLVIKGEKKESREQTKTGNHLSERRYGSFERNFRVPEGVDSGKIEATLKDGVLTVILPKKAEAMKPAKKIEVKAA
>NZ_CP049258.1|WP_165166792.1|1442049_1442343_-|hypothetical-protein
MGAFPLPYRKVRVEIVVPKKPGRGAITTAPVRLARQGQIFPGISGSVPRQFDMDIAGAQEIFRAESHSFRFLHSSSKAQLARPVSMASSILESTRRT
>NZ_CP049258.1|WP_165166790.1|1440977_1441412_+|hypothetical-protein
MTRNILTLAAVAALTTFIIPAGAHTGSDQSTLTLIKSVATKSTDGVAIEIARRGRGADDPAGDDRGGRGHGSDDPAGHASIKTFDPLLQMARRGRGADDPAGDDRGGRGHGSDDPAGHASIKTFDPLLQMARRGRGKDDPVGHG
>NZ_CP049258.1|WP_165166788.1|1439362_1440355_-|zinc-dependent-alcohol-dehydrogenase-family-protein
MTVSSAMMLVEYGRPLEMRERPLPAPQSGEIRLSISACGVCRTDLHVVDGDLPKVPLPLVPGHEIIGYVEEVGAGVSGLEPGQRVGVPWLGHTCGRCFYCLSEQENLCDRPLFTGYTRDGGYATHTIADARYAFALEGGTSDLLLAPLLCAGLIGWRSLRIAGDGKSLGLYGFGAAAHIITQVAKWQGRRVFAFTRKGDGQAQDFARSHGAEWAGASDETPPELLDAAIIYAPVGALVPQALKAVRKGGRVVCAGIHMSDLPSFPYRLLWEERQILSVANLTRDDGDSFFHMVPQIGIQTSVTPYPLADANRALDDLREGRLQGAAVLTM
>NZ_CP049258.1|WP_165173899.1|1437903_1439112_-|adenylate/guanylate-cyclase-domain-containing-protein
MTALAVRQAVRDIHLEFAAREVAEIVAAVERKLPAEWNALLAGTADIEQTERLQVPLQESVAEHDLPQFKIYTHDGKAVFSTDRAEIGLVEENAALTAALERQERVLVPHLEADGKRYNEFYIPVSRTNGEVGLVTEIYQPAWYLRDILIRALIMPTLVPSLLLAGLVFVLSYLIKRAQSGIDLRAARVRELSARLQSFMSSSAVGAVRSAPPGSDLPLRRIAVSLLYSDVRDFTGYSEMVAPEEVVAFLNRIMAVQIDCISRHGGDVDKLIGDALLSRFEGPDKERRAVAAALDVQAAVARDNLPRGVGIGVFTGPAISGAIGPEARRDYTVIGDSVNVAARLCSEAHRGEIVCDAVTIERSGLQARPIGAVEHIHVKGRERAIDIRRIAHADAGPTGGSV
>NZ_CP049258.1|WP_165166786.1|1436987_1437833_+|universal-stress-protein
MRTIRGIENILIGLTVEAKDEPTAAISYGLSLAQSAHALVTVYAPTVKLVLPHAFVSGAAAGIVAAENRYLEELAREAVKRIETQAREAGVKAKVTSSHLQRQKLVEGFTNETRLHDLCILDSESQAIDVDRDLIEAALLDSGRPLIVVPPEHRAFNAQHVVVAWDGSSKAARALFDALPILRAAATVEAVQIEGEKNLSRIVPGSALAAQLLAHGVKIVAKTIDARDGGVAETLRQYAHRSGSDLIVMGGFARARLRQLILGGVTQSLLRHCPVPLFLSH
>NZ_CP049258.1|WP_165165501.1|1436648_1436903_+|hypothetical-protein
MRVPRTLYLIADGGRVRYVERAGPGHFRTFRNALSAHMHDKTSEFGHDKPPEKLDHLLFNQWQRSSEIQELQIEIMQDQSPATD
>NZ_CP049258.1|WP_165166785.1|1435137_1436550_+|oxygen-independent-coproporphyrinogen-III-oxidase
MNDRPNSKCNLKQNCKPRGEPRSLVDKYHGRVPRYTSYPTAVNFGSGIGADQYSSWLAALSPDQPLSLYLHIPFCGQLCWYCACHTGVSHRREPIVGYVESLLREIDLVAAAIPHRPVVSALHLGGGSPNMLSISDLARLFTRLRERFTFADQATIAAELDPRFLTHEWIRVAARLGLSRASIGVQDLDPDVQAAINRIQPFEMVAQSIAALRREGVTSINVDLVYGLPRQTLHGVRTTIDQVATLEPDRVALFGYAHVPWMMPRQKLIREDELPDSRQRYQQQLVAGNRLQEAGYHPIGLDHFSLPVDDLAIAAENGLMKRNFQGYTSDDTRTVIGLGASSISSLEQGYAQNCPDVRRWREDIDRGKLATCRGIALTHEDRFWSDIIQALMCDLEVDFIDLLRRWDMPASVLAPALARLDDMQDDGLVRLRGSVLAVTRLGRPFLRSICATFDQYIADHGASPRHARAI
>NZ_CP049258.1|WP_165166783.1|1433893_1434616_+|MFS-transporter
MSSLRDEMAVAKVIDHHIEAGTGYAAAEAATEAAREELGLSARRLQGVLVVAGFACCMAMSMPQLHLVAYCGDLGYGVAVGAQIVSLMLGLGVVGRVGSGVIAERIGAGPMLLIGSAMQAVALLLYLFFDSLSSLWVIAGLFGLFQGGIVPMYAVIIRQFLPPREAGARISLVLTATVLGMACGGLAAGFIYDATQSYRLFLHGLLWNLVNLALIGWLLVWPKWRRRSQTKGLRSADGRP
>NZ_CP049258.1|WP_165166798.1|1445616_1448937_-|AAA-family-ATPase
MLALPELEALGLDRYAELFVAHGIDIDVLADLTDSDLEKLGLAIGDRRRILKAAQKLQRVAAPAVSTPSPAREAERRQLTVMFVDLVGSTALSERLDPEEMRDVLRAYQNTVTGEISRLEGFTAKLMGDGVLAYFGWPRTHEDEAERAVRAGLAVVGMVSRLPNAAGLPLAARVGVATGLVVVGDLIGEGAAQEQAVVGDTPNLAARLQALAEPGMVVIADATRRLLGDLFEMRELEALNLKGIRESVSAFVVLRERTLESRFAARQSGRVAPIVGRDQELGQLLERWRQATNNEGQAILLTGEAGIGKSRISEAVVEAVASEPHFLIRYQCSPYHTDSTLYPVIQQLTHAARFSADDKVERRLEKLEALLAEAGGSGVAAAPLLAELLGLDGTLRYGALNLTPQQRRSQTLAALIDQLSGLAGRKPVFWLIEDAHWVDPTTLELVELALDRVQSTKVLLLITARPTFVAGFASHPVVTRLALNRLARAATQAIVARITQGKRLPDTLLDEISAKTDGVPLFVEEMTKAVVESGALRETADAYHLDGPLSALAVPATLHDSLMARLDRLHGVKEVAQIASVIGRTFDHATIVELAALPESQLTDALQQLLAAELVFRRGLPPDATYLFKHALVRDAAYESLLKAKRIALHARLLGVLERRSDSAPEIRAQHAEAAGLVERALDLWEEAGKRAIARPAYKEAIASLENGVRLCSVLGDDLRWKRREQGFHVQIGQALIASQGYQASATLRAFECAMVLADEIGDVSLQLPAIYGKWVAPYVAGTGSEELAQRYAALADTLPETGPRLVGLRMLGLEAFHKGKFRESLALMTEAYDGYDPVVHRDLAFRFGHDPRAATANYQAWNLWHLGFPDQAVCKVEGGLRWAREINHTNTTALILCYGANIVHIWLRRPDRVESGAREALRLAEDNSMALYYAFGLPQLGWALSQQGKAPGLDEIELGLREASRINAGRLNPLHFSLAADAYARAGMHDQSREYIGKAFSFLARNGDLAFAAELHRMRAMLLLRAERSAHGAAETDLRRALEVAQQQEALSLELRAARDLAFLLAERGEKQQATDRLAPVYGKFTEGFDTPDLKEAKALLDAIR
>NZ_CP049258.1|WP_165166799.1|1449371_1449719_+|hypothetical-protein
MRFLICASLSLIISTSAASAADLTGDQIKEKLIGHTLKWKAEKYKVSGVTKYNADGTATSNMDGKPEVAGTWRIKGNNLCDKFGKQKESCTTRIDQIDDKVFYLEPYQAVSIIVD
>NZ_CP049258.1|WP_165166800.1|1449884_1450262_+|MFS-transporter
MMLIGSAMQAVALLLYLFFDSLSSPWVIAGLFGLFQGGIVPRYAVIIRQFLPTREAGARISLVLTATVLGMACGGLAAGFIYDATQSYRLAFLHGLLWNLVNLALIGWLLVWSKWRRRSHAVRVG
>NZ_CP049258.1|WP_165166801.1|1450494_1451475_+|TIM-barrel-protein
MPDTKFAARLNSFKSGAASYWPHKNRVTALDLVTRAATVPGLGAVDLNFPDHLEGISAREFGTRLADLGLSLNGFAMRYYTEPAFKVGAFTNPDPAVRRKAIDLTKRGIDAMREAGGDLMTLWMGQDGFDYAFQIDYARAWEMEVAAIREVCAHDSAVNISIEYKPNEPRAFALMPDIGTTLLLVGEIAAKNLGITLDFAHLLYADEMPAFAATLAARHSKLLGIHLNDGYGKRDDGLMAGSVHVFETIELLHVVAKLGYSSAIYFDTFPDASGLDPVAECTANIEAVNAMQSVVKRLVADTELEAAIARQDAVGARRIVNRALYG
>NZ_CP049258.1|WP_165166802.1|1451518_1452334_+|ribokinase
MTKSPRLPALDETVLGQSWHFKCGGKGGNQAVAAARAGARTAFVGCVGNDDFGSRLLANLDAAQVDRSRVSIVPMAGSGMSVAMEDASGNYSAVVVSGANQSIQPSQYENLSVRVLLIQNEISSLVTLDAARACKRDNTFVIYNTAPFLPLSDELLHNVDLIVANRVEATDATGIAIASLSDAARAAQALSSYGCNSVVTAGNLGCALCAHRGKPDLIAAVKVKPVSTHGAGDFFCGVVAARIAQGVELADAVSEANISAARFVSCADGVS
>NZ_CP049258.1|WP_165166803.1|1452927_1453425_+|prolyl-tRNA-synthetase-associated-domain-containing-protein
MPASRADLMARFSQLGIETETREHAPAFTVDQARDLRGTIPGGHCKNLFLKDEKGAVWLIVCLEDARIDLKAAPAKIGSKRLTFGKPELLMELLGVEPGSVTPFGLINDTGNRITVILEERMMRENLLNYHPLSNDATTTIAAGDLLAFIRSCGHEPRIVALAAP
>NZ_CP049258.1|WP_165166804.1|1453563_1454493_+|thioredoxin
MEIFPPVPGKSNGAGAPPAGALIKDSDTRTFMADVVETSRKVPVIVDFWAPWCGPCKQLGPMLEKLVKQANGKVRMVKVNVDENQQLAAQMRVQSIPAVFAFVDGQPVDGFMGALPESQIKQFIDRLGSQGGMAEEIEAAVTAGREALAQNNLAEAAQIFAQVLGADREHAGAIAGLAKCQIASGDLEQAKATLALVPPAKANDPEVVSAKAALELAETPVDHGEIANLTRVVEANADDHPSRFDLAVALNAAGKKQEALDHLLHIVRRKRDWNEEAARKQLVKFFEAWGPKDEFTLQGRRKLSSILFS
>NZ_CP049258.1|WP_165166805.1|1454499_1455171_+|LON-peptidase-substrate-binding-domain-containing-protein
MGFLDQYHSPDDLPRVLKVFPLPGALLLPHAELPLNIFEPRYLAMVSDALAGDRLIGMIQPDDDEADLTGSPTLKQVGCAGRITSFAETLDGRILITLSGVCRFAIGREVASDKPYRQIEPDFSAFAGDLSAPEDEEDVDRSSLLKVFREYLAANDMSADWDQVRAASTEALVNTLAVLAPHAPCDKQALLEAKDLKSRADVLIALTEMALARQGSGSRSSLQ
>NZ_CP049258.1|WP_165166806.1|1455179_1455365_+|Trm112-family-protein
MSRQTDPKLLEILVCPMTKTRLEYNRETQELISRAARVAYPIRDGIPIMLADEARELGENE
>NZ_CP049258.1|WP_165166807.1|1455357_1455711_+|DUF971-domain-containing-protein
MNSEPPEEIRLKDHGRTLEIQYGPEEIYALAAEYLRVESPSAEVKGHGPGQEVTVAGKKNVRIVRLSPVGHYALRIVFDDRHDTGLYTWDYLRELGRDEKTRWAAYLEKLAAEKLTR

Crispr_ID: NZ_CP049258_2

• CRISPR_ID: NZ_CP049258_2
• CRISPR_location: 1938745-1938843
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP049258_2

Consensus_repeat	Method
TCCGAAAACCGCTTCGCACTTTTCGGTCCGATGCTC	CRISPRCasFinder

spacers of NZ_CP049258_2

>2.1|1938781|27|NZ_CP049258|CRISPRCasFinder
TAACTCTTTGATTTGCGCATCGGATTA

CRISPR arrays and Neighbor proteins around NZ_CP049258_2

CRISPR arrays

The CRISPR arrays of NZ_CP049258_2

>merge|NZ_CP049258|2|1938745-1938843|CRISPRCasFinder
TCCGAAAACCGCTTCGCACTTTTCGGTCCGATGCTCTAACTCTTTGATTTGCGCATCGGATTATCCGAAAACCGCTTCGCACTTTTCGGTCCGATGCTC

>NZ_CP049258|2|2|1938745-1938843|CRISPRCasFinder
TCCGAAAACCGCTTCGCACTTTTCGGTCCGATGCTC	TAACTCTTTGATTTGCGCATCGGATTA
TCCGAAAACCGCTTCGCACTTTTCGGTCCGATGCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049258.1|WP_165167192.1|1937122_1937782_+|50S-ribosomal-protein-L21	unknown	unknown	gnl|CDD|237034
NZ_CP049258.1|WP_165167195.1|1938850_1939555_-|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl|CDD|381594
NZ_CP049258.1|WP_165167191.1|1935297_1936011_+|porin-family-protein	unknown	unknown	gnl|CDD|226163
NZ_CP049258.1|WP_165167201.1|1947873_1949043_+|divergent-polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|377404
NZ_CP049258.1|WP_165173966.1|1929399_1930920_+|DUF1254-domain-containing-protein	unknown	unknown	gnl|CDD|227659
NZ_CP049258.1|WP_165167194.1|1938176_1938722_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NZ_CP049258.1|WP_165167199.1|1944359_1944842_+|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl|CDD|234634
NZ_CP049258.1|WP_165167200.1|1945030_1946317_+|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl|CDD|227278
NZ_CP049258.1|WP_165167193.1|1937799_1938066_+|50S-ribosomal-protein-L27	unknown	unknown	gnl|CDD|235464
NZ_CP049258.1|WP_165167196.1|1939737_1940784_+|GTPase-ObgE	unknown	unknown	gnl|CDD|237048
NZ_CP049258.1|WP_165167190.1|1934376_1934892_+|hypothetical-protein	unknown	unknown	gnl|CDD|223301
NZ_CP049258.1|WP_165167187.1|1931306_1932236_-|catechol-1,2-dioxygenase	unknown	unknown	gnl|CDD|239543
NZ_CP049258.1|WP_165167198.1|1943192_1943804_+|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl|CDD|234611
NZ_CP049258.1|WP_165167186.1|1927811_1928834_+|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197666
NZ_CP049258.1|WP_165167188.1|1932404_1932902_+|transcriptional-regulator	unknown	unknown	gnl|CDD|226233
NZ_CP049258.1|WP_165167189.1|1932898_1933972_+|hypothetical-protein	unknown	unknown	gnl|CDD|227903
NZ_CP049258.1|WP_165173978.1|1943927_1944344_+|ribosome-silencing-factor	unknown	unknown	gnl|CDD|272901
NZ_CP049258.1|WP_165173968.1|1941952_1943185_+|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|234685
NZ_CP049258.1|WP_165173980.1|1946331_1947684_+|S41-family-peptidase	unknown	unknown	gnl|CDD|223864
NZ_CP049258.1|WP_165167197.1|1940780_1941908_+|glutamate-5-kinase	unknown	unknown	gnl|CDD|235460

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP049258.1|WP_165167192.1|1937122_1937782_+|50S-ribosomal-protein-L21	gnl|CDD|237034	PRK12278, PRK12278, 50S ribosomal protein L21.	1.20906e-55
NZ_CP049258.1|WP_165167195.1|1938850_1939555_-|transglycosylase-SLT-domain-containing-protein	gnl|CDD|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	6.39611e-12
NZ_CP049258.1|WP_165167191.1|1935297_1936011_+|porin-family-protein	gnl|CDD|226163	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane].	8.56889e-30
NZ_CP049258.1|WP_165167201.1|1947873_1949043_+|divergent-polysaccharide-deacetylase-family-protein	gnl|CDD|377404	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase. This family is divergently related to pfam01522 (personal obs:Yeats C).	1.18559e-68
NZ_CP049258.1|WP_165173966.1|1929399_1930920_+|DUF1254-domain-containing-protein	gnl|CDD|227659	COG5361, COG5361, Uncharacterized conserved protein [Function unknown].	1.33094e-117
NZ_CP049258.1|WP_165167194.1|1938176_1938722_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.10165e-33
NZ_CP049258.1|WP_165167199.1|1944359_1944842_+|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl|CDD|234634	PRK00103, PRK00103, rRNA large subunit methyltransferase; Provisional.	2.50156e-66
NZ_CP049258.1|WP_165167200.1|1945030_1946317_+|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl|CDD|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	1.22403e-63
NZ_CP049258.1|WP_165167193.1|1937799_1938066_+|50S-ribosomal-protein-L27	gnl|CDD|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	2.05854e-46
NZ_CP049258.1|WP_165167196.1|1939737_1940784_+|GTPase-ObgE	gnl|CDD|237048	PRK12299, obgE, GTPase CgtA; Reviewed.	0
NZ_CP049258.1|WP_165167190.1|1934376_1934892_+|hypothetical-protein	gnl|CDD|223301	COG0223, Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis].	1.9623e-36
NZ_CP049258.1|WP_165167187.1|1931306_1932236_-|catechol-1,2-dioxygenase	gnl|CDD|239543	cd03460, 1,2-CTD, Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate. 1,2-CTDs is homodimers with one catalytic non-heme ferric ion per monomer. They belong to the aromatic dioxygenase family, a family of mononuclear non-heme iron intradiol-cleaving enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings.	3.54718e-160
NZ_CP049258.1|WP_165167198.1|1943192_1943804_+|nicotinate-nucleotide-adenylyltransferase	gnl|CDD|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	6.33132e-61
NZ_CP049258.1|WP_165167186.1|1927811_1928834_+|AraC-family-transcriptional-regulator	gnl|CDD|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.12996e-21
NZ_CP049258.1|WP_165167188.1|1932404_1932902_+|transcriptional-regulator	gnl|CDD|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	6.7776e-31
NZ_CP049258.1|WP_165167189.1|1932898_1933972_+|hypothetical-protein	gnl|CDD|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	4.24244e-35
NZ_CP049258.1|WP_165173978.1|1943927_1944344_+|ribosome-silencing-factor	gnl|CDD|272901	TIGR00090, rsfS_iojap_ybeB, ribosome silencing factor RsfS/YbeB/iojap. This model describes a widely distributed family of bacterial proteins related to iojap from plants. It includes RsfS(YbeB) from E. coli. The gene iojap is a pattern-striping gene in maize, reflecting a chloroplast development defect in some cells. The conserved function of this protein is to silence ribosomes by binding the ribosomal large subunit and impairing joining with the small subunit in response to nutrient stress. Note that RsfS (starvation) is an author-endorsed change from the published symbol RsfA, which conflicted with previously published gene symbols. [Protein synthesis, Translation factors].	9.10487e-50
NZ_CP049258.1|WP_165173968.1|1941952_1943185_+|glutamate-5-semialdehyde-dehydrogenase	gnl|CDD|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP049258.1|WP_165173980.1|1946331_1947684_+|S41-family-peptidase	gnl|CDD|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	4.10911e-144
NZ_CP049258.1|WP_165167197.1|1940780_1941908_+|glutamate-5-kinase	gnl|CDD|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0

Protein sequences

>NZ_CP049258.1|WP_165167194.1|1938176_1938722_+|GNAT-family-N-acetyltransferase
MTDFLITTERLILRPVAAGDAEAIAALADNYKVAVMLARLPFPYKVEHARQFIDWVATQPADETVFVLCLRNEAQTFIGVCAYERRGEKDPELGYWLGEPYWGKGYMSEAVKAVVDHAFKSARHERLISGCRLQNLASRRVLEKAGFEHSGPYEIDSLILKAKVPGHRFVLTRERWESAAR
>NZ_CP049258.1|WP_165167193.1|1937799_1938066_+|50S-ribosomal-protein-L27
MAHKKAGGSSRNGRDTAGRRLGVKHFGGEAVIPGNIIIRQRGTKWHPGTGVGIGRDHTIYATVVGTVNFRASKGNKQVVSVLPPKAAE
>NZ_CP049258.1|WP_165167192.1|1937122_1937782_+|50S-ribosomal-protein-L21
MYAVIKTGGKQYRVAADDKLQIEKLPGEAGDIVEFTNVLMVASDGNVDVGAPFVAGATVAAEIIGQVRGPKIIIFKKHRRKHYRRKNGHRQDLTSVKITEILTGGAKPAKQAAKPAKAEPLAAPIGDKKAGDDLSLIGGVGPKIVKILADMGFTTYAQVANLTGDEIEKIEAEIKMPGRVAREEWIEQAKELAAGKPPRAKVDKEAKAEKAKAAKKSKE
>NZ_CP049258.1|WP_165167191.1|1935297_1936011_+|porin-family-protein
MFDKVLLGGAALLLMGAGARAADIEPVSYDWTGPYIGLQGGYAWGENDVQGNEVLDGGEGLAIQSDPVTPPDNKGSIALEGFVGGLHAGYNYQSDSLVFGLEGDIEYSGMDGDTETPFGEIKQEIDWLGSLRLRAGFAMDRALLYATGGLAVGGVDMKITDVDFGSNSESDTAWGWTIGAGIEYAFTDDLSARLEYRYTDLDNTKLDSTTPEIGDEVKFDNTFNAVRVGLSWHFHSI
>NZ_CP049258.1|WP_165167190.1|1934376_1934892_+|hypothetical-protein
MVGRWCRFWPEILLQETITVDSAETARTLYVKQTTAMARMLPKALELALSGDPPRIAQEHEHATYCARRSAEDGLINWLDPADAVLRLIRAVGDPYPGAFTTWNGRRLIIDIASYFPDSHRFIGLPGQVQSHTTDGFVVLCGDGGCVHVTAWRLENGSDKPRRHSKLGTPF
>NZ_CP049258.1|WP_165167189.1|1932898_1933972_+|hypothetical-protein
MIARNSSFVYKGKAIDPKQIARELSVQYLLEGSVRKSGQAVRISARLVDATTGAQIWAERYDLAMTEVFAIQDEIAERVVGEIEPELIKSESNLAVSRHTGNMTAWDRVRRGIWLFHQVTRPTHYEARDLFREACRLDPQLPEAHVWRARVSNGVISYGWSNDPSADLREAMEAALRGIYLDEKNPYAHYALAMASVFSNPEQAILPAEKAVELSPGFALGHFAVGLAQLSRGRASDAILPFQRGLKLSPHDPQNPAWLNLLAMSQLIAGDTEGASLTAARALAARPDWRPTLETMTCCYAVAGKWDDARRCVQEAERKGQSDDNLASLRQTIPQWRDQMNDLLRMAGWTVAPFVDR
>NZ_CP049258.1|WP_165167188.1|1932404_1932902_+|transcriptional-regulator
MLSRRFAFGPFVLNSEVGTLLCKGVPVPVPYRASLLLTAFLSRPGEVLTKSDLIDAAWQGAAVEEGNLAVQIAALRKLLGQSPEGGEWITTIPRVGYRFALRPDLGSGDRESSLDSPGEETTLARRPSIAVMPFANLGGKRSRSISRTALPRTSSRRWGVSAGSS
>NZ_CP049258.1|WP_165167187.1|1931306_1932236_-|catechol-1,2-dioxygenase
MSDSLIGKDVIAALAASAAGLHGADGNPRVKQVVNRLLVDLMVAIDELDISMDEFWTGIAYLTQAGKQNEFGLIVPGVVLEHFLDLRLDEAERRAGITGGTARTIEGPLYIAGAPLSKGEARLDDGTDDGQVLFMEGQVRDILGKPISGAIVDVWHANTMGNYSHFDPTQAAYNLRRRIETDEEGRYRFRSIMPSGYACPRGSQTEKLLKAVGRHGNRPAHVHFFITSPGHRKLTTQINIDGDKYLYDDFAFGTRSELIPVVEHVSDARKIDQAGLNKPFARIRFDFTLAKSAIAAPTTIVNREHAEAA
>NZ_CP049258.1|WP_165173966.1|1929399_1930920_+|DUF1254-domain-containing-protein
MTLSMKGLLGTASALILLAGVAQAQTAPKMEMTTPIPDSIVTPQSVETRLGTLKFFDGFPDKVTAEKLYDNLDFMRGVDAFLNAMPGASAEAIRVGVASQGADNNQTILIFEDLMDSRSLFLTGNTESIYNLMWLDTKAGPLVIETPPNILGMIDTHWFKYVGDVGNAGPDRGKGGKYLLLPPGYQGEIPDGYFVLRSSTYGNLFFWRGFLEGGSTKTAVENTRKFAKVCPLSEAGNPPPMKFINVSGKEFNTIHANNFHFFEEVNNIVQYEPNEAYHPEVLGQLAAIGIEKGKPFAPDERMKKILTEAVAVGNATARTITFDTRMKDAYYYPDSAWFTGFVGGSYEFLAQPGVRNLDARVLFHYYATGITPAMAIKRVGIGSQYAAATTDSENNPLDGSKTYKVRLPPNIPAKDFWSFVVYDNQTRSMLQTDQQFPSIGSDKKDLVINADSSVDVWFGPTAPAGHEANWVQTVPGKGWNVLLRLYGPLEPWFDKSWKPGEFEPVK
>NZ_CP049258.1|WP_165167186.1|1927811_1928834_+|AraC-family-transcriptional-regulator
MRGIPLTRCQFLLPFADIYSEIGGPTEALLQKFRLPVSLEEKADHYVPILRAIQFAEAAQGSEGISDIGFLASQRMQFCHLSEKLRTIIRCSPTLLVALQQTCKHGQSEDTNLSMWLELHDGNLRVCTKLLGTAGLQHLEHSQWLQNLFVIHIVRQFVGPEWAPTTVGFEARYVPGGEPQAFWSNTRFLSAQEASWIDIPVGYLSFPPLGNESPPGPPAEDAEPPVTDLIGMLQLMLPSYLDERIPSIAEIAEMTNISVRSFQRRLSSAALTYSDLVDAVRFENAKKLLRDTDAKIIDVALSLGYSESASFTRAFRRLSGVAPRQYRDTSRSKTSGIILT
>NZ_CP049258.1|WP_165167195.1|1938850_1939555_-|transglycosylase-SLT-domain-containing-protein
MRSVFALIPAAFLAGTVLAAPAHARKSEDPNSHAERVSAQKKNFKSATAKKAGKVRKSTNLKTRKAASAKTRKTAKSTPKFAQTRLTKKIKPKRQLSAKKMSGTKMTMSDQSLSINGASDQRVAQIIRDMAPSYGVPTWFALRIANVESGYNPYARGRAGEIGVFQLKCQTAKGMGFSGDCSKLTDARTNVQWGLKHLSLAIESSNGNLKLAASKHNGGLGRKSLVHSYVAKVF
>NZ_CP049258.1|WP_165167196.1|1939737_1940784_+|GTPase-ObgE
MKFLDQAKIYIRSGNGGAGSVSFRREKFIEMGGPDGGDGGRGGDIWIEAVDGLNTLIDYRYQQHFKAKTGGHGMGRDRAGANAPDITLKVPAGTQVFEEDNETFVADLAKIGDRIRLARGGNGGFGNAHFKSSTNRAPRRANPGEDAEERWLWLRLKLIADAGLLGMPNAGKSTLLAAVSAAKPKIADYPFTTLTPQLGVVRAAGSSFVLADIPGLIEGAHEGHGLGTRFLGHVERCAVLLHLIDVTAEDPVAAYRVIRKELKSYGGHLADKPEVIAFNKVDAVSEEDLNLKLADFKRRIRKTPIVMSGVTGRNVEDVMKKLLTVITDTRRAERGETSDKIKIENWQP
>NZ_CP049258.1|WP_165167197.1|1940780_1941908_+|glutamate-5-kinase
MTQRLNEARRIVVKIGSALLVDGKTGAIKADWLGSLVEDLAKARARGQDIIIVSSGAIALGRRNLGFAQGQIRLEESQASAAVGQIAFAHAWSEALRQHGIVAAQILVTLNDTEERRRYLNARSTLSTLLARGAVPVINENDTVATSEIRYGDNDRLAARVASMMSADCLVLLSDIDGLYTAPPGTPDARLIPEVAEITPEIEAMAGKPVSGLGSGGMITKIEAGKIALSAGCNMVIASGHALHPFQRIEKGEACTWFLSGATPLQSRKRWIAGTLVPMGRLHVDDGAAAALNKGKSLLPAGVKRIEGSFARGDAVSIVSTAGLEIARGLVAYDRDDAARIAGRKTNEIEKALGFRGRDEMVHRDDLVMTAGARA
>NZ_CP049258.1|WP_165173968.1|1941952_1943185_+|glutamate-5-semialdehyde-dehydrogenase
MGAAARLAARQLALASPDIKNQALAHMAQAIRADALLIARENAADLAAARSKDLKSSFLDRLTLTPERIEAMAKGLDDIAALPDPIGRVTESWTRPNGLTIARVRVPIGVIGIIYESRPNVTADAGALAMKSGNAAILRGGSDSYRSSAAIVAALQRGLVQAGLPKEAIQMVPTMDRDAVGHLLSGLDGTVDLIVPRGGKSLVARVQQEARVPVFSHLEGICHVYVDKASELGMATKIVLNAKMRRTGICGAAETILVDRACAASHLKPLITMLIEAGCQVRGCAETQAADPRVTPASEEDWSTEYLDAIVSMKVVAGLDDAMAHIARYGSQHTDAIITGDEQAARRFLAEVDSAITLHNASTQFADGGEFGFGAEIGIATGRLHARGPVGLEQLTTFKYQVSGTGQIRP
>NZ_CP049258.1|WP_165167198.1|1943192_1943804_+|nicotinate-nucleotide-adenylyltransferase
MIVPPPFGAGQRIGLFGGSFNPAHSGHRAVALYALKRLGLDWIWWLVSPQNPLKDAGDYRDYDERLAVTRLVARHPRFIVSNLEEQLKTRTTAATLAALAPVLRRGRFVWIMGADSFANLHHWNDWTEIPETIPLAILARPGYSMRALESPAALRYENRRIATERAKELPGAPPPAWCFIPMPLRSESSTAIRERAKNRKQTS
>NZ_CP049258.1|WP_165173978.1|1943927_1944344_+|ribosome-silencing-factor
MTAPRKKTGAPKRAVAVKSAPKRKTKNALLTSILSHLEDAKAEDIVTIDLNGKAVIADGMIVATGRSNRHVGAIADQLVEKLKGEGYKDLRVEGLPHADWVLVDAGDIVVHIFRPEVRSFYNLEKLWSDHAPDERVAV
>NZ_CP049258.1|WP_165167199.1|1944359_1944842_+|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MRLAILAIGRLKAGPELDLFDDYAKRARGLGRACGITEITARDFAESKLSDAPGRMAAEAALLTEAIPPSAFTIVLDERGKSLSSDEFAQLFRRHLDQGTQSIACLIGGPDGHGPELRRKAGLLLSLGSMTWPHRLARVMLAEQIYRAVTILVKHPYHRI
>NZ_CP049258.1|WP_165167200.1|1945030_1946317_+|peptidoglycan-DD-metalloendopeptidase-family-protein
MTSSLPNLRPMLAALAAFAVMIPAASAQTADDLNTLEQQLDASKSLQEQIAAEREAIVQEQAALSQKLIALAEKIQSREAAILGAEERLQELDAEQLKIHTGLAARREEISRLLAGLQRIERNPPPALVVEPTDVLSALRSAMMFGTIVPELRQEAASLSAQLARLETLQAQTVTERESLKDHVARLFSSRREMTDLQARKKSLLADTNERLKAEKQRARALAEKAKDMKQLLATLEEERLKAEAAEKARAEAEAKTAAELKAKAEAQARIAAAKKLQPRMAFADIKASLQYPAQGQILKVYGASDGFGGTTRGIFVATRADAQVVTPADGHVEFAGPFRSYGQLLILNTGGGYHVLLAGLGEITAEQGQFLQAGEPVGIMGKSAAPGTLTGDQLQNGRPVLYIEFRKNGEAIDSSPWWIGGFAQARG
>NZ_CP049258.1|WP_165173980.1|1946331_1947684_+|S41-family-peptidase
MRSFGLVLAGAVSATVLWQAWSGAIAASNSDTYKQLNLFGDVFDRVRSDYVEPPDEEKMIEAAIDGMLTSLDPHSSYMNAKRFQEMQVQTKGEFGGLGIEVTMENGLVKVVAPIDETPAARAGVMANDLIIKLDGAEVQGMSLNEAVDKMRGKVNTPITLTVMRQGAKEPLEFKLVRDIIRVKSVKFEIEGPQKDVGYIRISSFTEQTQEGLDAALSQIRKDTGDKLKGYIIDMRNNPGGLLDQAISVSDTFLDRGEIVSTRGRNADETQRFNAQKGDTSDGKPVVVLINGGSASASEIVAGALQDHKRATVIGTRSFGKGSVQTIIPLGSQGALRLTTARYYTPAGRSIQAKGIDPDTVIEQELPPELLGKDTSTKGEASLKGHLTNEGGGDEGGGSSAYVPEDKTKDLQLQAAIDVLHGVKVASNAKPKEAAKPPQTTNNSDDETNAN
>NZ_CP049258.1|WP_165167201.1|1947873_1949043_+|divergent-polysaccharide-deacetylase-family-protein
MRRNEFRQPLRRRGAWEKLWAKRPSSLWVASVSAIVLLTAGTVWLSRVPYPYAGEPVIVVKIPPVAELNTASTDPAPRPEAEAPETPSEDEDSRKVEILEAPPQETVETEAAIIISPRRSLKPAPFAEVSETGPYGALPRIGAGNKKPHNIYARPVSASILYSNMPKVAIALGGMGLNTELTQKAIKSLPGEVTFAFAPYGENLQVQVNKARADGHEVMLQLPLEPFGFPAANPGPKTLMAHADAGANLDALAWHMGRFAGYTGITNYMGARFLTDAQALRPVLAEMKKRGVVFLDDGQAARSMAAQVGQVVGLPVRNGVKVIDLDATEEGIEKALEELETEARDKGVAIGTGTGLDVTIDTLDQWSRSLSEKGILLVPVSAAYRGRAS

Crispr_ID: NZ_CP049258_3

• CRISPR_ID: NZ_CP049258_3
• CRISPR_location: 2023234-2023990
• CRISPR_type: TypeI-E
• Repeat_type: NA
• Spacer_info: 12 spacers
• Cas_protein_info: cas6e,cas5,cas7,cas8e,cas3

Consensus repeat of NZ_CP049258_3

Consensus_repeat	Method
GTTTCTTCCCCGTACGCGGGGGTGGACC	PILER-CR
GTTTCTTCCCCGTACGCGGGGGTGGAC	CRISPRCasFinder
NNGTTTCTTCCCCGTACGCGGGGGTGGACC	CRT

spacers of NZ_CP049258_3

>3.1|2023262|33|NZ_CP049258|PILER-CR,CRT
CGACCTCGAGCTGTTCGAAGTGGAGCGCCACGC
>3.2|2023323|33|NZ_CP049258|PILER-CR,CRT
GGAGCAGGATGTGGTGGTGCGCGAGGGGCTGCT
>3.3|2023384|33|NZ_CP049258|PILER-CR,CRT
GTCGCCCGATCTCGACAGCCGCATTGCCGACGT
>3.4|2023445|33|NZ_CP049258|PILER-CR,CRT
CCGCTATCGTCGATTTTTCGAAGAGCACGATTA
>3.5|2023506|33|NZ_CP049258|PILER-CR,CRT
GTATCCTCACATCACCGAGAAGGACACCGGCCA
>3.6|2023567|33|NZ_CP049258|PILER-CR,CRT
CTATTGGCATGCACTGCCGATGTACGCCCAGGC
>3.7|2023628|33|NZ_CP049258|PILER-CR,CRT
CGGCGACGACGGGGTGCGGACCTATGACGGCTC
>3.8|2023689|33|NZ_CP049258|PILER-CR,CRT
GGAAACCGCCTACCAGACGGCGAAGACCGGCGA
>3.9|2023750|33|NZ_CP049258|PILER-CR,CRT
CATGGTGCCCATCGGCGGCGAGCGCATGAACAC
>3.10|2023811|33|NZ_CP049258|PILER-CR,CRT
ATACATGGGCGCCGACGTTGTCTATGACGGTGG
>3.11|2023261|34|NZ_CP049258|CRISPRCasFinder
CCGACCTCGAGCTGTTCGAAGTGGAGCGCCACGC
>3.12|2023322|34|NZ_CP049258|CRISPRCasFinder
CGGAGCAGGATGTGGTGGTGCGCGAGGGGCTGCT
>3.13|2023383|34|NZ_CP049258|CRISPRCasFinder
CGTCGCCCGATCTCGACAGCCGCATTGCCGACGT
>3.14|2023444|34|NZ_CP049258|CRISPRCasFinder
TCCGCTATCGTCGATTTTTCGAAGAGCACGATTA
>3.15|2023505|34|NZ_CP049258|CRISPRCasFinder
CGTATCCTCACATCACCGAGAAGGACACCGGCCA
>3.16|2023566|34|NZ_CP049258|CRISPRCasFinder
CCTATTGGCATGCACTGCCGATGTACGCCCAGGC
>3.17|2023627|34|NZ_CP049258|CRISPRCasFinder
CCGGCGACGACGGGGTGCGGACCTATGACGGCTC
>3.18|2023688|34|NZ_CP049258|CRISPRCasFinder
CGGAAACCGCCTACCAGACGGCGAAGACCGGCGA
>3.19|2023749|34|NZ_CP049258|CRISPRCasFinder
CCATGGTGCCCATCGGCGGCGAGCGCATGAACAC
>3.20|2023810|34|NZ_CP049258|CRISPRCasFinder
CATACATGGGCGCCGACGTTGTCTATGACGGTGG
>3.21|2023871|33|NZ_CP049258|CRISPRCasFinder
CAACATGGAACGGCATCAATGTGGTCTGCATCT
>3.22|2023872|32|NZ_CP049258|CRT
AACATGGAACGGCATCAATGTGGTCTGCATCT
>3.23|2023932|31|NZ_CP049258|CRT
GTGGGTGCTCTGCCAGATAGGTTATTGTGAA

CRISPR arrays and Neighbor proteins around NZ_CP049258_3

CRISPR arrays

The CRISPR arrays of NZ_CP049258_3

>merge|NZ_CP049258|3|2023234-2023990|PILER-CR,CRISPRCasFinder,CRT
GTTTCTTCCCCGTACGCGGGGATGGACCCGACCTCGAGCTGTTCGAAGTGGAGCGCCACGCGTTTCTTCCCCGTACACGGGGGTGGACCGGAGCAGGATGTGGTGGTGCGCGAGGGGCTGCTGTTTCTTCCCCGTACGCGGGGGTGGACCGTCGCCCGATCTCGACAGCCGCATTGCCGACGTGTTTCTTCCCCGTACGCGGGGGTGGACTCCGCTATCGTCGATTTTTCGAAGAGCACGATTAGTTTCTTCCCGGTACGCGGGGGTGGACCGTATCCTCACATCACCGAGAAGGACACCGGCCAGTTTCTTCCCCGTAGGCGGGGGTGGACCCTATTGGCATGCACTGCCGATGTACGCCCAGGCGTTTCTTCCCCGTACGCGGGGGTGGACCCGGCGACGACGGGGTGCGGACCTATGACGGCTCGTTTCTTCCCCGTACACGGGGGTGGACCGGAAACCGCCTACCAGACGGCGAAGACCGGCGAGTTTCTTCCCCGTACGCGGGGGTGGACCCATGGTGCCCATCGGCGGCGAGCGCATGAACACGTTTCTTCCCCGTACGCGGGGGTGGACCATACATGGGCGCCGACGTTGTCTATGACGGTGGGTTTCTTCCCCGTACGCGGGGGTGGACCAACATGGAACGGCATCAATGTGGTCTGCATCTCGTCTCTTCCCGTGCGCGGGGGTGGACCGTGGGTGCTCTGCCAGATAGGTTATTGTGAAACGTCTCTTCCCCGTGCGTAGGTGGACC

>NZ_CP049258|3|1|2023234-2023871|PILER-CR
GTTTCTTCCCCGTACGCGGGGATGGACC	CGACCTCGAGCTGTTCGAAGTGGAGCGCCACGC
GTTTCTTCCCCGTACACGGGGGTGGACC	GGAGCAGGATGTGGTGGTGCGCGAGGGGCTGCT
GTTTCTTCCCCGTACGCGGGGGTGGACC	GTCGCCCGATCTCGACAGCCGCATTGCCGACGT
GTTTCTTCCCCGTACGCGGGGGTGGACT	CCGCTATCGTCGATTTTTCGAAGAGCACGATTA
GTTTCTTCCCGGTACGCGGGGGTGGACC	GTATCCTCACATCACCGAGAAGGACACCGGCCA
GTTTCTTCCCCGTAGGCGGGGGTGGACC	CTATTGGCATGCACTGCCGATGTACGCCCAGGC
GTTTCTTCCCCGTACGCGGGGGTGGACC	CGGCGACGACGGGGTGCGGACCTATGACGGCTC
GTTTCTTCCCCGTACACGGGGGTGGACC	GGAAACCGCCTACCAGACGGCGAAGACCGGCGA
GTTTCTTCCCCGTACGCGGGGGTGGACC	CATGGTGCCCATCGGCGGCGAGCGCATGAACAC
GTTTCTTCCCCGTACGCGGGGGTGGACC	ATACATGGGCGCCGACGTTGTCTATGACGGTGG
GTTTCTTCCCCGTACGCGGGGGTGGACC

>NZ_CP049258|3|3|2023234-2023930|CRISPRCasFinder
GTTTCTTCCCCGTACGCGGGGATGGAC	CCGACCTCGAGCTGTTCGAAGTGGAGCGCCACGC
GTTTCTTCCCCGTACACGGGGGTGGAC	CGGAGCAGGATGTGGTGGTGCGCGAGGGGCTGCT
GTTTCTTCCCCGTACGCGGGGGTGGAC	CGTCGCCCGATCTCGACAGCCGCATTGCCGACGT
GTTTCTTCCCCGTACGCGGGGGTGGAC	TCCGCTATCGTCGATTTTTCGAAGAGCACGATTA
GTTTCTTCCCGGTACGCGGGGGTGGAC	CGTATCCTCACATCACCGAGAAGGACACCGGCCA
GTTTCTTCCCCGTAGGCGGGGGTGGAC	CCTATTGGCATGCACTGCCGATGTACGCCCAGGC
GTTTCTTCCCCGTACGCGGGGGTGGAC	CCGGCGACGACGGGGTGCGGACCTATGACGGCTC
GTTTCTTCCCCGTACACGGGGGTGGAC	CGGAAACCGCCTACCAGACGGCGAAGACCGGCGA
GTTTCTTCCCCGTACGCGGGGGTGGAC	CCATGGTGCCCATCGGCGGCGAGCGCATGAACAC
GTTTCTTCCCCGTACGCGGGGGTGGAC	CATACATGGGCGCCGACGTTGTCTATGACGGTGG
GTTTCTTCCCCGTACGCGGGGGTGGAC	CAACATGGAACGGCATCAATGTGGTCTGCATCT
CGTCTCTTCCCGTGCGCGGGGGTGGAC

>NZ_CP049258|3|1|2023234-2023990|CRT
GTTTCTTCCCCGTACGCGGGGATGGACC	CGACCTCGAGCTGTTCGAAGTGGAGCGCCACGC
GTTTCTTCCCCGTACACGGGGGTGGACC	GGAGCAGGATGTGGTGGTGCGCGAGGGGCTGCT
GTTTCTTCCCCGTACGCGGGGGTGGACC	GTCGCCCGATCTCGACAGCCGCATTGCCGACGT
GTTTCTTCCCCGTACGCGGGGGTGGACT	CCGCTATCGTCGATTTTTCGAAGAGCACGATTA
GTTTCTTCCCGGTACGCGGGGGTGGACC	GTATCCTCACATCACCGAGAAGGACACCGGCCA
GTTTCTTCCCCGTAGGCGGGGGTGGACC	CTATTGGCATGCACTGCCGATGTACGCCCAGGC
GTTTCTTCCCCGTACGCGGGGGTGGACC	CGGCGACGACGGGGTGCGGACCTATGACGGCTC
GTTTCTTCCCCGTACACGGGGGTGGACC	GGAAACCGCCTACCAGACGGCGAAGACCGGCGA
GTTTCTTCCCCGTACGCGGGGGTGGACC	CATGGTGCCCATCGGCGGCGAGCGCATGAACAC
GTTTCTTCCCCGTACGCGGGGGTGGACC	ATACATGGGCGCCGACGTTGTCTATGACGGTGG
GTTTCTTCCCCGTACGCGGGGGTGGACC	AACATGGAACGGCATCAATGTGGTCTGCATCT
CGTCTCTTCCCGTGCGCGGGGGTGGACC	GTGGGTGCTCTGCCAGATAGGTTATTGTGAA
ACGTCTCTTCCCCGTGCGTAGGTGGACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049258.1|WP_165167255.1|2021763_2022468_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl|CDD|273842
NZ_CP049258.1|WP_165167260.1|2033021_2033459_-|YidB-family-protein	unknown	unknown	gnl|CDD|226276
NZ_CP049258.1|WP_165167250.1|2013139_2013712_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NZ_CP049258.1|WP_165167251.1|2014279_2015233_+|hypothetical-protein	unknown	unknown	gnl|CDD|198350
NZ_CP049258.1|WP_165167262.1|2034392_2036129_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|227903
NZ_CP049258.1|WP_165167254.1|2020571_2021747_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
NZ_CP049258.1|WP_165167264.1|2039038_2042293_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|143636
NZ_CP049258.1|WP_165173992.1|2028137_2030633_-|arylsulfatase	unknown	unknown	gnl|CDD|293749
NZ_CP049258.1|WP_165167263.1|2036605_2037418_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165167249.1|2012257_2013019_-|class-II-aldolase	unknown	unknown	gnl|CDD|181226
NZ_CP049258.1|WP_165167256.1|2022473_2023175_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl|CDD|187858
NZ_CP049258.1|WP_165167265.1|2043551_2044007_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165167252.1|2015384_2015681_+|hypothetical-protein	unknown	unknown	gnl|CDD|198350
NZ_CP049258.1|WP_165167259.1|2030952_2032827_+|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl|CDD|227903
NZ_CP049258.1|WP_165167257.1|2024082_2026446_+|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl|CDD|182031
NZ_CP049258.1|WP_165167258.1|2027218_2027842_+|recombinase-family-protein	unknown	unknown	gnl|CDD|214861
NZ_CP049258.1|WP_165167261.1|2033548_2033806_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170
NZ_CP049258.1|WP_165167253.1|2018592_2020572_+|hypothetical-protein	cas8e	cls000028_cas8e_CAS-I-E	unknown
NZ_CP049258.1|WP_165173990.1|2015677_2017849_-|primosomal-protein-N'	unknown	unknown	gnl|CDD|235514
NZ_CP049258.1|WP_165173988.1|2010932_2012168_-|homoserine-dehydrogenase	unknown	unknown	gnl|CDD|226576

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP049258.1|WP_165167255.1|2021763_2022468_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	1.5e-28	94.5	0.0
NZ_CP049258.1|WP_165167253.1|2018592_2020572_+|hypothetical-protein	cas8e	cls000028_cas8e_CAS-I-E	3.6e-23	76.5	3.0
NZ_CP049258.1|WP_165167254.1|2020571_2021747_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	3.6e-64	212.3	0.6
NZ_CP049258.1|WP_165167257.1|2024082_2026446_+|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	2.1e-58	192.8	0.0
NZ_CP049258.1|WP_165167256.1|2022473_2023175_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	5.7e-18	60.4	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP049258.1|WP_165167255.1|2021763_2022468_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl|CDD|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	5.15313e-29
NZ_CP049258.1|WP_165167260.1|2033021_2033459_-|YidB-family-protein	gnl|CDD|226276	COG3753, COG3753, Uncharacterized protein conserved in bacteria [Function unknown].	1.0566e-28
NZ_CP049258.1|WP_165167250.1|2013139_2013712_+|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.40738e-13
NZ_CP049258.1|WP_165167251.1|2014279_2015233_+|hypothetical-protein	gnl|CDD|198350	cd07772, FGGY_NaCK_like, Novosphingobium aromaticivorans carbohydrate kinase-like proteins; belongs to the FGGY family of carbohydrate kinases. This subfamily is predominantly composed of uncharacterized bacterial proteins with similarity to carbohydrate kinase from Novosphingobium aromaticivorans (NaCK). These proteins may catalyze the transfer of a phosphate group from ATP to their carbohydrate substrates. They belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	5.36871e-95
NZ_CP049258.1|WP_165167254.1|2020571_2021747_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.11981e-61
NZ_CP049258.1|WP_165167264.1|2039038_2042293_-|AAA-family-ATPase	gnl|CDD|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	1.88851e-57
NZ_CP049258.1|WP_165173992.1|2028137_2030633_-|arylsulfatase	gnl|CDD|293749	cd16025, PAS_like, Bacterial Arylsulfatase of Pseudomonas aeruginosa and related proteins. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	0
NZ_CP049258.1|WP_165167249.1|2012257_2013019_-|class-II-aldolase	gnl|CDD|181226	PRK08087, PRK08087, L-fuculose-phosphate aldolase.	4.17626e-80
NZ_CP049258.1|WP_165167256.1|2022473_2023175_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.31133e-10
NZ_CP049258.1|WP_165167252.1|2015384_2015681_+|hypothetical-protein	gnl|CDD|198350	cd07772, FGGY_NaCK_like, Novosphingobium aromaticivorans carbohydrate kinase-like proteins; belongs to the FGGY family of carbohydrate kinases. This subfamily is predominantly composed of uncharacterized bacterial proteins with similarity to carbohydrate kinase from Novosphingobium aromaticivorans (NaCK). These proteins may catalyze the transfer of a phosphate group from ATP to their carbohydrate substrates. They belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	7.50027e-09
NZ_CP049258.1|WP_165167259.1|2030952_2032827_+|adenylate/guanylate-cyclase-domain-containing-protein	gnl|CDD|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	6.61389e-69
NZ_CP049258.1|WP_165167257.1|2024082_2026446_+|CRISPR-associated-helicase-Cas3'	gnl|CDD|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.40223e-64
NZ_CP049258.1|WP_165167262.1|2034392_2036129_-|tetratricopeptide-repeat-protein	gnl|CDD|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	2.09379e-68
NZ_CP049258.1|WP_165167261.1|2033548_2033806_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	5.06282e-11
NZ_CP049258.1|WP_165167258.1|2027218_2027842_+|recombinase-family-protein	gnl|CDD|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	3.69117e-45
NZ_CP049258.1|WP_165173990.1|2015677_2017849_-|primosomal-protein-N'	gnl|CDD|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NZ_CP049258.1|WP_165173988.1|2010932_2012168_-|homoserine-dehydrogenase	gnl|CDD|226576	COG4091, COG4091, Predicted homoserine dehydrogenase [Amino acid transport and metabolism].	5.33777e-174

Protein sequences

>NZ_CP049258.1|WP_165167256.1|2022473_2023175_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLIQLTLDITKSARHLSSFIGSRALEDDSLLIKTVLTETFSGALVRPWAVHSRHGPLLTIVGYSDEGAEALNARRALALPSLQAAVGEALSVEMPPLKDGDAFRFNVRLIPTVRITPTGKRRHGERDAFLVAAEATGPDGGLARGLVYERYLKSKLGGADVTSCRLDGFRLVRFTRPKKDGRAQITMPEAILTGTLKVTDATTCTSCIRAGIGRQRVYGYGMVRLQPVKLGG
>NZ_CP049258.1|WP_165167255.1|2021763_2022468_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSFFTIRFKGPLAALQGPRIDGEPQTLPIPTPSLITGMIGAALGISRAEAERLQALQDGMRLACVVHKPGVEVIDYQIADLSKPYLVGPMWSSGARIVEREGSQITGLRQQWKPYLADVDMTLVVELDPSAPNTAEEIIAAFHEPARPLFLGRSSCPPDVALAGAIIEAAGLEDAVNKVASERSSALIYLPAGCTQPQWGDLPVSIPGRRDWPANRHSGSELYVCRQPAAVEPG
>NZ_CP049258.1|WP_165167254.1|2020571_2021747_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MFVQIHTLRDYSTALPNRGQDGLAKRTVYGGIERQRISSQSFKAALRDSKTLVRTAHDGSTVDDTLRALANGCGIGMSIRSALIEERIVLPKLMEKGFSEEEAKTWANAIMGLWRKADAAVASDTPLVVGEKEVDALVRAATLLKVAGTDTKEFRNMIEKPQARNKAPEAVRQAIENMRAIKANAGMDGALFGRFATGVAVDNVDSAVHVAHLVTVHPLFSVTDFFSVQDLLKTGQGEDRGGSHINTAELTSGLFYGYVVVDLRQLEENFASLDSAQRGAIVAWLIRAVAQVEPAAKLGSTAPYSCLRELMVEIGRRQPRSLIGAFENPVDRTSERSLSEEARARLIAHAAEMDALTGKSGWRVLLREHTGGTLPAVEALSDAAAKYLRAA
>NZ_CP049258.1|WP_165167253.1|2018592_2020572_+|hypothetical-protein
MVSNPTTLADPIFSARLQTEIKKLNLFELLCSAATTKLVDLTAMAAHQRPAVVTVFAILSHLLCRYGNIDVADPRSWASAWERLIGHDALRLTASHDEVAFLQPPTIEPTSQQSIEAADLLLAKVEHEVKQTWRTTAERGLFAIMGSMLRPNVKDHRSSSRIGLTAVLTSNNGALGDEIAHLAAAFDALFVGPAADHATKDHLVWLRMYSPKTAPLSLADLPLPFLDVGRAQRLRAVDRDLFEVWAVPNNTARINADADPWLDDPHTPKVVTSKDAKRYKLARKPFDYRFEHAVLFGARSDKEDVVRPRILDLGQYRVVRLCALGSEQGKTKGYREATYVAARGSSLLSFDEPSEADRPARLSRRALETIETGLKILNRSLIELFKEADEPSDVDWNRIDTVRQTFRSTVAPRSIQFVFDALSRDEDIAMEQRSLDQLVAEVVFECFKLAATALANPLKHARAEDKLMTGIRFQLKGAAMNEQKVQPLLARQTYAILSKMMLHLSPDDRARLRTMSLSDPPLSFWKLMAQVPAAHTENKRCLEVWQIVLRTVGRVYHASRPLGRILRETDFPEHRLSRFLVATGSSLPGLLDELARWLVSHEVDKANLADLATVGLGDALDDHDARDWARRSIALQYVGAPIVSSVPARTSEATVGGED
>NZ_CP049258.1|WP_165173990.1|2015677_2017849_-|primosomal-protein-N'
MSADSLVTADVLLPLALEGPYTYAVPSGLAVAPGDYVEVPLGPRSFIGCVWKLGVGDGGGKTLRPIVQKFDLPRLSDTHRAFIDWVAQYYLEPLGNVLRLCLRAPGAFGESKGETAYRIGPHPPAKLTAQRARVLDIACEGPAMKAPELAELAGVGTSVVKMLAKTGALETVALPPHRAFPMPDPAAGKLTLSHEQEEAAQELRALVTRRTAGTLLLDGVTGSGKTEVYFEAMATALASGRQVLLLLPEIALTPPFIERVERRFGVAPAQWHSGMRPRERERVWRGVAEGGARIVVGARSALFLPWAKLGLVVVDEEHESAYKQEDGVPYHARDMAIVYGALGKFPVVLASATPSLESLVNAERGRYVHVRLTSRHGTAELPPSHIIDMRQSAPPSGSWLSEPLAQAVAETLAQGDQALLFLNRRGYAPLTLCRACGHRFDCPNCAASLVEHRFRKQLMCHHCGHTAAIPPACPKCETAGKLVPCGPGVERLAEEVVQRFPEARLTILSSDLARGTLLKDAIREVADGVHNLVIGTQLVAKGHHFPHLTLVGVVDADFALDSGDPRAGERSWAQMAQVAGRAGRGEKPGRALIQTYRPDHPLMLALAAGDRDGFLAEEKRLREGAELPPYGHLAALVISGRDGHETERFARSLQPLAPYGEGVHVLGPAPAPLHLVRGLHRWRFLVRARRGINVQAYLRAWLGDIKPKGSLRLAIDVDPYSFL
>NZ_CP049258.1|WP_165167252.1|2015384_2015681_+|hypothetical-protein
MVDRSLCAVKSKGDIIVDGPFAKNPVFLSSLAGLRPQQNVLASQLRDGTTQGAMVLALMGEDDKLPELALSLDRIAPEAPAMIADYAEKWRRLAEQAG
>NZ_CP049258.1|WP_165167251.1|2014279_2015233_+|hypothetical-protein
MTEDRLRGIAVVDVGATNSKIVLFDSAGKPLAERKMASRHGAGPPFPHLDPGPLVAFCAEHLPDLDAVLPIDVIVPSAHGAAIACLAGDGSLALPVMDYMAEPPPEIIAAYREIEPPFQEVFGPLLPMALTHGLQLFWQETAFPAEFAKVRTILPWIQYVGYLLSGEAVIEIASMSCQSQLMDVRDNSFSSLARRRGWDRLFAPWAKAWEVTGPLKDGFRGKRFRGRGDVLAGIHDSSANYLRYLAGGRRHFTLLSTGTWIIGFDTNTVITELDPERDTVTNTDIFGKPVACCRFMGGREFEISHAAHPPKPRASGL
>NZ_CP049258.1|WP_165167250.1|2013139_2013712_+|helix-turn-helix-domain-containing-protein
MEEQEILEDAVDRRIAQRLKALRVDRGWSLDELAGRSGVSRATLSRLENSAISPTTSMLGKLCAAFGITLSRLMHMAEDGFAPLLRRSAQTVWSDPEISFRRRAVSPPAQTLAGEVIEGEIGPGTRIDYDRSPKQGLEHHLVLLEGQLEITVAGTTHELKAGDCLRYQLFGPSSFATPKRVSARYLIFMV
>NZ_CP049258.1|WP_165167249.1|2012257_2013019_-|class-II-aldolase
MSKSKNADLKKKIISVCRRMNEMGINQGTSGNVSARTADGFVITASGVPYDIMDVEHIVEMDLEGGYYGKYLPSTEWRMHMDIFKARPEAGAIVHTHSIYATALSSLRKDIPPFHYMIGVTGGSTLRVSDYAEFGTQALSDTMLAALKERTACLLANHGQIAFGPNLDKALWLAGEIETLCHQYWAASLAGKPVILSDTQMKTVLARFKTYGKQAGELKQGEALAVIAPTRRDAPKAASPKSKKEKPKKDKSK
>NZ_CP049258.1|WP_165173988.1|2010932_2012168_-|homoserine-dehydrogenase
MGTDLAVQLARMQGLRLAAISELNIANARAALLLAGHTPDDFAEARSARDIDRLIELKKIAITGDLEALVNAGRVDVVIDATGNPDTGAVFALAAIKAGKPIVMLNVEADITIGRFLHQEARRAGVVYTGAAGDEPAAALELIGFAQSLGLSIVCAGKGKNNPLKFDAVPAEFEAEAKQRNMNARVLVEFVDGSKTMVEMVAIANSTGLVPDVPGMHGPAATRDELADVLIPKDKGGVLSKAGCVDYSIGKGVAPGVFCIVEADHPRVIERMIDLKVGKGPYFSLFRPFHLTSLEVPISAAHAVLHKQADMVPLDHPVAEAIAVAKRDLAPGETLGKIGETQYRAWAMTWSEARRANAIPIGLAERAKVMKPVKAGSYLTYENCAPDDALTITQLRRRLDQADAQFLAAAE
>NZ_CP049258.1|WP_165167257.1|2024082_2026446_+|CRISPR-associated-helicase-Cas3'
MHQLIEPWAKINPQGETRSVFEHSLDVALTIHAILDREIERRRLSSAFNVKLTDVHLARLAVLGGLHDFGKCLKGFQDKLGSLSALGPGHVAEALAVLVSVRETRDAVGTALLREWFGEPTNPIYVSVCHHGEPVGEDRFRRHLAIVRELLQTTRYGHDPVTEITRLRDRLLAAFPQALSGAEQLTFAPAAQHLFAGILMTADWMASGFAFDPGGRRELAEELLDRTGWSGWHSGATPRALLGGWEPTAAQAAVETIPLQNLVIIEAPTGTGKTEAALIWASRLVLDDLVDGLYFAVPTRSAATELHARIGRVMTGQHPALRGKIVRAVPGMLDVEDARPDYPPETWAVAAPKRVFAAPIAIGTIDQALLSIIRNRHAWLRAALLSRHLLIIDEVHASDPYMAALTNALVRRHLNLGGHVLAMSATLGETALAQLQDRRRKSFEDAQRVSYPVVRTPSGDTVLTNTQRRAIDIGLVPHHEARASAVEAARDGHAVLLIRSTVKDAIADYLAVSAEVEALLHHSRYALADRSWLDRCLLGIFGPKAQRRGIVAVTTQTAEQSLDIDADLLITDSCPADVLLQRLGRLHRHRHGSRPRAWIIDPGPLTEFVAENGKPIGRDGQGWPWVYQNILSVGETLDWVRVHGQIVVPDHSRALVECATHADHLREVADQTGSKWQVLWQRLYERGRIDTQLAEAGLVDWARPYREATVDVRYATRLGEGSITVATPGLVSPFTGEPIAALPIPGTWLSGIDFGEQVEATVSGNTITLEGRSFTYTELGVQKSQSR
>NZ_CP049258.1|WP_165167258.1|2027218_2027842_+|recombinase-family-protein
MRRAAIYLRVSTDKQTTENQERELRDVAAHSGWDIVATYRDEGISGAKSRSARPGFDALCKDATRRKFDVIMAWSVDRLGRSLQDLVAFLADIAVARVDLYLQQQGLDTTTPAGRALFQMCGVFAEFERAMIRERIRAGLARAKAKGVKLGRKPIEPSKERAIVRLLQTDGIRKVARKVGVGVGTVQRIARELRAPQKDSVPLSLRG
>NZ_CP049258.1|WP_165173992.1|2028137_2030633_-|arylsulfatase
MVCTFIAVTGISLALPGMSVAQQSNAPAGSPAATRAIDGLQLPAPAMPFGGKIDRNALQSKPFWQPRIAPPEGAPNVLLIITDDVGFGAPSTFGGVIPTPALDRIAQMGLRYTNMHSTALCSPTRAALITGRNHHSAGFGVIAEQATGYPGYDSVITKDKATIGTILKDNGYATSWFGKNHNTPSYTISMAGPFDQWPTGMGFDYFYGFNGGDTSQWTPGNLFRNTTQIYPFETQKGYNLITAMADEAIGYMQQLNTIAPQQPWLVYYAPGGTHAPHHPTKEWVDKISAMHLFDDGWNKLRDTIYANQKRLGVIPQNAELTPWPSDLLKNWDQLSADEKKMFIRQADVYGAYLAYTDHEIGRVIQAVEDMGKLDNTLIIYISGDNGSSAEGTLVGTPNEVAQFNGVDVSVADQLKYFYDIWGTEYTYNHMAVGWTWAFDTPFKWTKQIAGYFGGTKQGMAIAWPKVIADKGGLRTQFAHVIDIAPTILEAAGIREPSVVDGIAQSLMEGTSLVYTFNAANKDEPSHHRTQYFEMMGEFGLYHEGWMATTKVKRPAWVTFGNVDSDPANNAVWELYDINNDWTQTNDLAAKNPEKLKELQGLFWQEAQRYNVLPLDASVATRVVTPRPSATAGRTEFEFPGKMTGISNGVAPTILNSSYTFIADVTVPEGGGDGMIITQGGRFAGYGFYINKGKPTFDWNLLGLKNVVWEAPDALSAGKHTLVFDFKYDGLGFGTLAFNSVSGLGQSGTGIMTVDGKVAAAQKIEHTLATILAWDENMDIGSDTGTPVNDKVYHVPFAFTGTIDSLKLVVDRPQLSDADKAKLEAEMKKAAD
>NZ_CP049258.1|WP_165167259.1|2030952_2032827_+|adenylate/guanylate-cyclase-domain-containing-protein
MTQWAIFGPSRHPNKGSRAPLHRLRCLQLAGGLSLQEGQRRLAAILAADVAGYSRLMAADESGTLGRLRRLRAEVFEPKIAQFYGRIVGSAGDSLLIEFASAVNAVQCAVEVQRELVGQNASLPEDRRMAFRVGVNLGDVIAEDNTIHGDGVNIAARLEKLAEPGGVCIGHAIYDQVKGKLAYAYDDLGEQRVHNIAEPVRAYRVKPPNASVNSLSASSARDARPLPDRPSIAVLPFQNMSGDVEQEYFADGMVEEIITALSRMRSLFVIARNSSFAYKGRSLDIKQVGRELGVRYLLEGSVRKSGNRVRITGQLIDAGTGAHLWAERFDGRLEDIFDLQDQITGRVVGAIAPRLERAEIERAARKPTENLDAYDYFLRGMAAFHLWNNEANNEALRLFYKAIELDPNFAAAYGMAARSYSQRKSGGWMTDRAYEVAETARLGQRVGEIGGDDASALCSAGAALGFVVGDLDGAAAHIEKALVLNPNLAWVWLSSALVRVWLGEPEVAIEHATHAMRLSPQDAQVFVMQFAIGLAHFFAGRYSEALTWAEMARRAQPVHAPSNALAAASGALAGNRAVADVAMARLRQLMPELRMSNLKDFIPIRQSEHFDRWAGAIRQAGLPE
>NZ_CP049258.1|WP_165167260.1|2033021_2033459_-|YidB-family-protein
MARGMPSLGALLGLVAIAGYQNRDKIGEFVKGLGISDPNSPLGGILEGARKSLGGSATGTDMNSGLGELVDRFRQNGQGATADSWVATGANKPINDSEVERALGPDLIDSLAKQTGLSRADLLSRLASMLPDVVDKMTPGGRLPQ
>NZ_CP049258.1|WP_165167261.1|2033548_2033806_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MSIIWTIIIGFLAGVIAKFLMPGPNEPSGFILTAILGIVGAFVASYMGQVLGIYGPGEGAGLIGAVVGAVIVLAVWAMIAKNRAV
>NZ_CP049258.1|WP_165167262.1|2034392_2036129_-|tetratricopeptide-repeat-protein
MERRLAAILAADLVGYSRLMGQDEAGTLAALKAVRAELIDPKIAEHKGRIFKATGDGVLAEFPSVVNAVACAVEIQSSMATNNAEGPEERHILFRIGVNLGDVIAEGDDIFGDGVNVATRLESTAPPGGIAVSSVVRDQIGNRLDVQFEDIGKQELKNIAQPVHVYQLVNGRANRPMKERLALPDRPSIAVLPFQNMSGDPEQEYFGDGIAEDIITAISKLRGFFVIARNSSFAYKGKSPDIRQIARELGVRYVLEGSVRKGGDRLRVTGQLIDATSGNHIWAERYDRPTAEIFALQDEITASVVAAIEPQLYAAESLRLRSKSPESLDAWGCLVRAMPYIWTWVIQDEDTGINLLKRAIELDPGYARARSLLAWAFATRVASGKLEFEQGIFDALTLAQRAIDLDPDDPWAHFAAGYVYAFSRRLGPAVEELNEALQRNPNFAFARTILACAYGYAGLAEDGVHQLELARRLSPRDYTQAASLSIEGLCHFVAGRYGDAVTAERRAIQIRPDFCTAWRTFTAAAGLADDLEQARIGLVQCKRLQPNLSIDWVEKYHPLIRPDDRAKYIEGLRRAGLE
>NZ_CP049258.1|WP_165167263.1|2036605_2037418_+|hypothetical-protein
MTNLLATMVVGLFVALPSSDSVADPHPKGFSNHQFNAVKPVTKGGVTTFRIQDKQCSKVDYGDGRGESDCYNGNVRSNLLYQPDARLNTALEYHFDIWIDPSFSYGGFYNGHSIGFLKDALDSRLRIASWEGPYLHNFLYMLKADTIHGITFLGNQCQPKERFGQWVSFSMKVRWTADKRGWIKVSCDDKVIYSAEAVATNQAPHCYITNQCEPGVKKNPKRITFIVGPVMAGFGYEWKKYGKKSQFTDIQPEGITIKMRNMAVTKIAKP
>NZ_CP049258.1|WP_165167264.1|2039038_2042293_-|AAA-family-ATPase
MNLSIDQWLTEHGLEMLAGTMHANDIDLEILQELSESELAALGVSLGNRKRLLKALANAKKTLPPTAVSSTPIGERRQVTILFADIVGFTTLSDRLDPEDTHRLLGRYFHVVDRIVADFGGSIDKHIGDAVMAVFGAPKSHGNDAERAVRAANAIHEALSSFEPRLDVHIGVAGGEVLASQTGSEDHAEYTVTGPSVNLASRLQGVAGAGETLVSESVYQAIAGFTACESRGEIQVKGLGDALKVWCLAGVSDRRGVSSEQVFVGRRNELQQALGVLDALFKNSSGSVLYIRGEAGIGKTRFVDQVEKHAQTRGAGTHAGLILDFGVAQGEDAITLLLRSLCSVPARTDKSDVIIAVRELVEKSVITPSDQVHAFALLGISQPSELKPIFDALDNEARKSGRLRTLSSILRHAAKMAPLFLRVEDVHWADEAILQSLATIAGETAEHPILLVMTSRVEGEKIDHSWRASARDCSFSTLDLGPLRKDDAMVLASGYLSATDGFAQKCIDRAAGNPLFLEQLLRSKQGDAVPGSVQSIVQARIDQLSETDRTILRAASVLGQRFSLAAVRAMIKDPGSSCSNLVAQHLVRPQEEDYLFAHALVRDGVYQSIVLNQRKDLHSAAAGWFAGRDMSLRAWHLGMAADPSAPSAYLDAAQAHAEAHRHDRATEHCKTALGLNPQREIVFSLLALLGEVQLESNDPAGSIDTFELALQTAEHPLERARALTGLASAMRLVDRLADAEVNINEAIELAGREENHLILSKAYFLRGNLEWPRANYSACITNHQASLDHARASSSIELEVQALGGLGDANYLRGCMITANEHFELCVRRADEGGLARVAAANRPMLAWCAIYKGELDLAWNHAIEARENAQSISHKRSEIIALNALALIAAERGDVASIFHYTEPAMALARELGSQRFQAMVLMLQSKAFFIEGSPNRAAKYLHTALDLASQTLSFIGPWIMGGLVLAADSPTERRQWLDQGLSILQNSAVSHNYLFFHADAMDAHLIDRNWDGVRKHAELLDRYTTNEPLPLSSFMIERARWAAAIGENTNDHELRAVGRQLQSRGHQMGLKRSLELFSNFSH
>NZ_CP049258.1|WP_165167265.1|2043551_2044007_-|hypothetical-protein
MTRSVDALLTMMLDSGAWLGRRIEAAESLLAYEAPPEHVEAAKAFLTAVFDDPDQDEEFRMKALKLVRKAEARRVVSSTTSGKMDERPHRELNRRMLRAKRRLALMEAGLWPPPKGWDADIANAEPPRGAIVDLSNMAERMEAARLRIIKK

Crispr_ID: NZ_CP049258_4

• CRISPR_ID: NZ_CP049258_4
• CRISPR_location: 3492794-3492903
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP049258_4

Consensus_repeat	Method
CCCAGGCCGCCGCCACCCGAGCCGCC	CRISPRCasFinder

spacers of NZ_CP049258_4

>4.1|3492820|58|NZ_CP049258|CRISPRCasFinder
GCTGGGTGCCGTCCCGCTCTGGCCGGCTGCGCCGCCCAAGATGCTCCCCAGAATATCT

CRISPR arrays and Neighbor proteins around NZ_CP049258_4

CRISPR arrays

The CRISPR arrays of NZ_CP049258_4

>merge|NZ_CP049258|4|3492794-3492903|CRISPRCasFinder
CCCAGGCCGCCGCCACCCGAGCCGCCGCTGGGTGCCGTCCCGCTCTGGCCGGCTGCGCCGCCCAAGATGCTCCCCAGAATATCTCCCAGGCCGCCGCCGCCCGAGCCGCC

>NZ_CP049258|4|4|3492794-3492903|CRISPRCasFinder
CCCAGGCCGCCGCCACCCGAGCCGCC	GCTGGGTGCCGTCCCGCTCTGGCCGGCTGCGCCGCCCAAGATGCTCCCCAGAATATCT
CCCAGGCCGCCGCCGCCCGAGCCGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049258.1|WP_165168669.1|3491109_3491991_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|237907
NZ_CP049258.1|WP_165168675.1|3496207_3497398_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|99746
NZ_CP049258.1|WP_165168677.1|3497663_3497918_+|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl|CDD|284238
NZ_CP049258.1|WP_165168667.1|3487825_3488554_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl|CDD|236959
NZ_CP049258.1|WP_165168663.1|3484479_3484743_-|DUF4170-domain-containing-protein	unknown	unknown	gnl|CDD|372720
NZ_CP049258.1|WP_165168678.1|3497998_3499411_-|metalloprotease-TldD	unknown	unknown	gnl|CDD|182685
NZ_CP049258.1|WP_165168673.1|3494096_3495443_-|MATE-family-efflux-transporter	unknown	unknown	gnl|CDD|240554
NZ_CP049258.1|WP_165168676.1|3497412_3497667_+|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl|CDD|171099
NZ_CP049258.1|WP_165168665.1|3485490_3486828_-|TldD/PmbA-family-protein	unknown	unknown	gnl|CDD|223389
NZ_CP049258.1|WP_165168662.1|3483667_3484474_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP049258.1|WP_165168674.1|3495439_3496057_-|HAD-family-phosphatase	unknown	unknown	gnl|CDD|319790
NZ_CP049258.1|WP_165168670.1|3492156_3492435_+|DUF1127-domain-containing-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165168679.1|3499428_3500076_-|invasion-associated-locus-B-family-protein	unknown	unknown	gnl|CDD|369076
NZ_CP049258.1|WP_165168661.1|3482486_3483707_+|MFS-transporter	unknown	unknown	gnl|CDD|225371
NZ_CP049258.1|WP_165168680.1|3500352_3501240_+|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl|CDD|224537
NZ_CP049258.1|WP_165168664.1|3484739_3485504_-|3'(2'),5'-bisphosphate-nucleotidase-CysQ	unknown	unknown	gnl|CDD|238816
NZ_CP049258.1|WP_165168668.1|3488644_3490027_+|glutamate--cysteine-ligase	unknown	unknown	gnl|CDD|178221
NZ_CP049258.1|WP_165168681.1|3501281_3502931_+|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl|CDD|238833
NZ_CP049258.1|WP_165168666.1|3486824_3487745_-|4-hydroxybenzoate-octaprenyltransferase	unknown	unknown	gnl|CDD|183808
NZ_CP049258.1|WP_165168672.1|3493421_3494075_-|DUF937-domain-containing-protein	unknown	unknown	gnl|CDD|227690

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP049258.1|WP_165168669.1|3491109_3491991_-|LysR-family-transcriptional-regulator	gnl|CDD|237907	PRK15092, PRK15092, DNA-binding transcriptional repressor LrhA; Provisional.	1.77842e-63
NZ_CP049258.1|WP_165168675.1|3496207_3497398_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|99746	cd06453, SufS_like, Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.	1.48125e-117
NZ_CP049258.1|WP_165168677.1|3497663_3497918_+|Txe/YoeB-family-addiction-module-toxin	gnl|CDD|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	6.37304e-46
NZ_CP049258.1|WP_165168667.1|3487825_3488554_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl|CDD|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	5.01672e-71
NZ_CP049258.1|WP_165168663.1|3484479_3484743_-|DUF4170-domain-containing-protein	gnl|CDD|372720	pfam13773, DUF4170, Domain of unknown function (DUF4170).	2.07804e-41
NZ_CP049258.1|WP_165168678.1|3497998_3499411_-|metalloprotease-TldD	gnl|CDD|182685	PRK10735, tldD, protease TldD; Provisional.	0
NZ_CP049258.1|WP_165168673.1|3494096_3495443_-|MATE-family-efflux-transporter	gnl|CDD|240554	cd13149, MATE_like_2, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	1.29413e-91
NZ_CP049258.1|WP_165168676.1|3497412_3497667_+|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl|CDD|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	7.85003e-26
NZ_CP049258.1|WP_165168665.1|3485490_3486828_-|TldD/PmbA-family-protein	gnl|CDD|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	7.25231e-101
NZ_CP049258.1|WP_165168662.1|3483667_3484474_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.40105e-29
NZ_CP049258.1|WP_165168674.1|3495439_3496057_-|HAD-family-phosphatase	gnl|CDD|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.26644e-34
NZ_CP049258.1|WP_165168679.1|3499428_3500076_-|invasion-associated-locus-B-family-protein	gnl|CDD|369076	pfam06776, IalB, Invasion associated locus B (IalB) protein. This family consists of several invasion associated locus B (IalB) proteins and related sequences. IalB is known to be a major virulence factor in Bartonella bacilliformis where it was shown to have a direct role in human erythrocyte parasitism. IalB is upregulated in response to environmental cues signaling vector-to-host transmission. Such environmental cues would include, but not be limited to, temperature, pH, oxidative stress, and haemin limitation. It is also thought that IalB would aide B. bacilliformis survival under stress-inducing environmental conditions. The role of this protein in other bacterial species is unknown.	2.25419e-30
NZ_CP049258.1|WP_165168661.1|3482486_3483707_+|MFS-transporter	gnl|CDD|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	9.29627e-99
NZ_CP049258.1|WP_165168680.1|3500352_3501240_+|cytochrome-c-oxidase-subunit-II	gnl|CDD|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	5.42533e-71
NZ_CP049258.1|WP_165168664.1|3484739_3485504_-|3'(2'),5'-bisphosphate-nucleotidase-CysQ	gnl|CDD|238816	cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family. It has been proposed that CysQ helps control intracellular levels of PAPS, which is an intermediate in cysteine biosynthesis (a principal route of sulfur assimilation).	4.57553e-64
NZ_CP049258.1|WP_165168668.1|3488644_3490027_+|glutamate--cysteine-ligase	gnl|CDD|178221	PLN02611, PLN02611, glutamate--cysteine ligase.	0
NZ_CP049258.1|WP_165168681.1|3501281_3502931_+|cytochrome-c-oxidase-subunit-I	gnl|CDD|238833	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Only subunits I and II are essential for function, but subunit III, which is also conserved, may play a role in assembly or oxygen delivery to the active site. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme (heme a3) and a copper ion (CuB). It also contains a low-spin heme (heme a), believed to participate in the transfer of electrons to the binuclear center. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from cytochrome c on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electrons are transferred from cytochrome c (the electron donor) to heme a via the CuA binuclear site in subunit II, and directly from heme a to the binuclear center.	0
NZ_CP049258.1|WP_165168666.1|3486824_3487745_-|4-hydroxybenzoate-octaprenyltransferase	gnl|CDD|183808	PRK12878, ubiA, 4-hydroxybenzoate octaprenyltransferase.	2.0326e-153
NZ_CP049258.1|WP_165168672.1|3493421_3494075_-|DUF937-domain-containing-protein	gnl|CDD|227690	COG5403, COG5403, Uncharacterized conserved protein [Function unknown].	0.00178033

Protein sequences

>NZ_CP049258.1|WP_165168670.1|3492156_3492435_+|DUF1127-domain-containing-protein
MRDYALNRAIFEDRIGNRSLFSRLFHNWKARKEVSQLTEFDDFMLADIGVRRDDLEWAAKLPITTDPGKALEDRSVLRERHQARRRPGWGAY
>NZ_CP049258.1|WP_165168669.1|3491109_3491991_-|LysR-family-transcriptional-regulator
MIPNLDVDLLKTFLAIADTGNFTRAAEEVHKTQSAVSMQMKRLEELVGRPLFTRDGRQSRFTADGERLIEYARRIVNLNDEAVAAFTKPEITGTLRFGTPDDYADRFLPEILARFSRTHPLVTVNVDCAMSPVLFERARHGELDLSLVTACSEIIADEIVRTENLVWVTSQRHSVHMLDTLPVALSHTGCEWRALTIGALERQGRKYRIAYSSPNSNAVNAAVLAGLAVGAIPEICLRPGMRLLTEKDGFPKLNQFRIGIVHRPGRRSSAAEALGRHISESISNMPRQLMAAE
>NZ_CP049258.1|WP_165168668.1|3488644_3490027_+|glutamate--cysteine-ligase
MSGPTPDTPEARALITGKRQLIDYIAKGEKPEAQWRIGTEHEKFPFLTDTLGPVPYDGPRSIKALLQGLKARFGWTGVYEAGNIIALADPHGLGSISLEPGGQFELSGAPLSTVHETCDEVHNHLAQVREVGDALGIGFLGLGASPLWTRAETPVMPKGRYNIMAPYMDKKGKLGRDMMFRTSTVQVNLDFSSEADMVQKLRVSLALQPVATALFANSPFTEGRPNGYKSFRSAVWLDTDPDRSGMLPFAFEAGMGYERYVDYALDVPMYFVHRDGHYHNTAGESFRAFIEGKLPQLPGVRPTLQDWSDHLTTIFPEVRLKKFLEMRGADTGPWRTLCALPALWVGIFYDQTALDGAWELVKDWSAEDRQKLREAVPREALQATIRGRTVQDIAKDMLALSRQGLGERRIVGCKGKTETRFLDDLDEIAASGRTRAEDLLQLYDTSWNHDVKRVFRDFAY
>NZ_CP049258.1|WP_165168667.1|3487825_3488554_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MRDTPRLHVALKLAENAEHQLAQDQSHYLRDVMRLKPGDPVRLFNAGDGEFLAYVGAVTRKGMSVICERKLADAVPPPDIDFIFAPLKHARLDYVVQKATELGARRLRPVFTARTIVDRVNLDRMRANAVEAAEQCNLVYVPDVEEPEKLGKLLAAWPAERALIYCDERSDGADTIALLKGLKLPAALLIGPEGGFTAEEREGLHRLPFVTVISLGPRIMRADTAGTAALALVQAVLGDWHS
>NZ_CP049258.1|WP_165168666.1|3486824_3487745_-|4-hydroxybenzoate-octaprenyltransferase
MTDHVADAPPDNWVDRYMPQAWRPYARLMRLDRAIGSWLLLLPCWWGLILAQIAQGGGVPNIWYALLFLIGALIMRGAGCTLNDLADRDFDAKVARTRSRPIPSGQVSVKAAVVFLILQCLAGLVILLQFNWPTVLIGAASLAIVAIYPFMKRFTYWPQVFLGLAFNWGALVGWSSIHGNLSWPALLLYLGGIAWTLAYDTIYAHQDKEDDVLIGVKSTALKFGASSVYWIAGFFILALVLIDAGLWLARAGLLAHMGVVAAAVHAAWQIAKLDIDDPQNCRKLFWSNRYFGLLLLLGLLLDTLTR
>NZ_CP049258.1|WP_165168665.1|3485490_3486828_-|TldD/PmbA-family-protein
MTKDLATLAQTALARAKHFGASAADAIVIDGRSLDVAVREGAIENLEQSEAIEVGLRVFVGQSSAAIATSKIDSGGIERIAEQAVAMAKAAPADPYSGIATPDQVARDWAALDMAGETLLDAQALRDMALSAERHALDVRGVSKSGGAGASSYERRVMLAASNGFAGGYRRTGLSLSATAIAGEATAMERDYDFSSVIHPQDLRKPEDIGREAGLRAVRRLNPRKVKSQAVPVIYDSRIASSLVSHFLSAIMGSAIARGTSFLREKLGEQVFGSDIRIVDDPLRPRGLASRPFDAEGIATRPLPLIEAGVLKSWILDLGSARQLGLESTGHAARGLAGPPGPSSSNVTLSPGAASLDEMIKSIGTGFYVTELIGHGPNIVTGDYSRGASGLWIENGEIAYPVSEVTLAGKLADIFRNLTPASDLTYRAAINAPSCRVEGMTLGGR
>NZ_CP049258.1|WP_165168664.1|3484739_3485504_-|3'(2'),5'-bisphosphate-nucleotidase-CysQ
MADADLLHVAVRDAGLLARSLFRKVKSWTKSDGSPVTEADLAVDKALKERLHGERPDYGWLSEETPDTAERLERRQVWIADPIDGTRAFTHGGDEWCVAVALLTDGRPTLAAIYRPMTDDFYEAEIGKGARLNGHPLHVGQTASLAGARILGNASALTQLRARAPIEAVASGNLPLALRLAFVAQGKLDAALSTTAKHDWDLAAGDLLVHEAGGIVTGLSGKSFTYNRTETRQNSYVASSPRLQAALLEHLSPS
>NZ_CP049258.1|WP_165168663.1|3484479_3484743_-|DUF4170-domain-containing-protein
MSKSPKKQPEQLLHLVFGGELTDLDGITFKDVAGLDIVGIYPNFETAQKAWLTKARETIDNAQMRYFIVHLHRLLDPSTDTTAKKKS
>NZ_CP049258.1|WP_165168662.1|3483667_3484474_-|alpha/beta-hydrolase
MTHDDDLTRFAEEGADPLPVADAEGFVDHEGARIRYASYGSGPTVVLLHGGLGHSGNWGHQVPALLDAGYRVLLIDSRGHGRSTRDERPYTYELMASDVVAVMDRLAIDNAAFVGWSDGACIALVLAMRAAWRVRGVLFFGCNMDPSGTKEIDENNPLLQRCFSRHAKDYARLSGTPDAFGEFVAAVSLMMKTEPNYSPDDLARIAVPVTIAHSEHDEFIKRDHADYLARSIPGAQFILLPGVSHFAPLQRPALFNHAILDFLARLTD
>NZ_CP049258.1|WP_165168661.1|3482486_3483707_+|MFS-transporter
MPLALYALTAGAFGIGVTEFVIMGLLIEVAGDLGVSIPAAGLLISGYALGVVLGAPILTVATGRWPRKSVLLALMAVFTLGNAAAALAPDYGTLMAARVLTAFAHGTFFGVGSVVATGLVAPDKKASAIAIMFTGLTVATILGVPFGTWLGQMFGWRSTFWAVTAVGFAAFAVIWAFVPRDAAPAQQGSLRDDLVVLRRPQVLLGLLTTVLGYAGVFAVFTYIAPILTRISGFSEAAVSPLMLAFGAGLLIGNLAGGKLADRKLTPALIGSLVTLTVVLGLMSFAIHDRIASALFVFLLGAAAFATVAPLQMWVLEKAEGAGQNLASSFNIAAFNLGNAGGAWLGGLVIDRGPGLDFVTWAAAFVTLSGLAVALLALKLDAGGRRAACPAPAADQSVRRARKSSIA
>NZ_CP049258.1|WP_165168672.1|3493421_3494075_-|DUF937-domain-containing-protein
MEILRAAQGGRFVANAGVAAGVDETAAAAVLSRMGPAIAAQLRKRAEDPQAFEALLDLLEDGDGDAFLDDSNFMDDPELIKDGKAVLTDIFGSAKAARSALAIEARDDAMMKLAAIAASAVLAVLARQYARPQMQGLMGAQRASSNGSEQGGILSTIVEAVIKGVVQETTRQLAPKKRRRRTTSVFGTRTRRRTRKRRNTTPSLDQIFGEIIGAIRR
>NZ_CP049258.1|WP_165168673.1|3494096_3495443_-|MATE-family-efflux-transporter
MSSALTSEARFVTGSTMRHVVVMTFTGALGLMSMFLVDLADLFYLSLLGKTEITAAIGYAGTVVFTNLSLCIGTGIAAAVLVARNLGAKRPERAREFATSCFMYSCILSAVFSGVIALAADWLLRLLGAEGEALHLAKQFIWIASPGFVVLAGGIACSFTLRGLGDARRAMYVTLVVAIVIAILDPIFIFGLGWGIQGAALAGVIADLCSLAVGFHSVHRVHNFFAPPSWARLRADLREISEIAVPAMLTQLATPFANAYATRAVAPFGNEAVAAAAIIGRIIPVAFGIIFSLSGSVGPIIGQNYGARAYDRVRRTLTDGLIFATIYTLVAAALLYVFRHDVAELFRASGRTIDLVVFFCSFIAASWAFTGAQFVASAAFNNLGHPNTSTVFNWAKATIGTIPFALYGAHVAGPEGVMVGVALGSIIFGVASVAWAYRIVAKVAQQKA
>NZ_CP049258.1|WP_165168674.1|3495439_3496057_-|HAD-family-phosphatase
MSVDIVIFDLDDVLCRYDLGARLRALARLSGKTPRDIRAALWDSGFEDAADSGTYQTPEEYLAEFASRLGHPISRDEWIAARRASIQPWPDMLALVREIARHKRVALYTNNGPLMKDGIGQVFPEAVQIFGTDCYFSFELLTKKPDPESYRRLMQRIGIDAGNAWFTDDKKSNVEGARLAGLRAHHFISRPALERKVRELGLLTA
>NZ_CP049258.1|WP_165168675.1|3496207_3497398_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MDVSQIRADTPATARRAYLHNAGAALMPRQVVSALKDHIDLEAEIGGYAAFRREIDRCEAVYASVARLLNAEVPEIALVENATVAWQMAFYSLSFAPGDRILTAEAEYAANYVAFLQMAKRTGAVIDVVPSDETGELDVEALERMIDKRVKLIAITWVPTNGGLANPAAAVGRIARAHGIPYLLDACQAVGQMVVDVADLQCDMLSATGRKFLRGPRGTGFLYVRQGFLERMEPPVIDHYAAPWVERDRYELRPDARRFENWENNYAARLGLGAAVDYALDIGMPEIEARCRMLSGLLRRGLAALDGVTMLDLGRDPSAIVSFNVDGMDAREVVKKALDAGITIGASEPESTRIDSENRKLADTVRASPHYYNTEEEVDRLIELCREIASLQFVRK
>NZ_CP049258.1|WP_165168676.1|3497412_3497667_+|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MKTKSYSELRQNLAATLDSVTEDHEPVIITRDRGKPAAVLISLEDFASYEESRYLLQSPRNADRLLKAVAELEAGKGTERKLAE
>NZ_CP049258.1|WP_165168677.1|3497663_3497918_+|Txe/YoeB-family-addiction-module-toxin
MKLIFSEQAWEDYLHWQTQDRKLLERINALIKECSRTPFKGTGKPEPLRGSLSGWWSRRITQEHRLVYRPSEDGLLIAQCRYHY
>NZ_CP049258.1|WP_165168678.1|3497998_3499411_-|metalloprotease-TldD
MISLLDKSGIGRGEATDILSTALKGADDGEVFVEQRLSEQAVFDDGRLKSASFNEAQGFGLRVVSGETQGYSHSTELSAAAMKRAAEICRTIVGGPSSAVAAAPSRTNRELYPATNPSDHFAFADKVALLQRVDDFARKADPRIRQVSISLSGDWQEIEILRAEGQVYRDSRPLVRFQVSVMASDGTERASGSHGFGGRGLYGDYLSEAAWQDAVREAVRQSLVGLEAKPAPAGEMDVVLGPGWPGILLHEAIGHGLEGDFNRKKTSAFAGLMGERIAAKGITVVDDGTVARARGSIAIDDEGTPSSSTTLIEDGILVGFMQDRLNARLMGMKPTGNGRRQSFAHSPMPRMTNTYMLNGDKHPDEILASVKNGLFAKSFGGGQVDITSGKFVFSCTEAYLIENGRITTPVKGATIIGNGADALKRISMVGNDMALDPGIGTCGKQGQGVPVCVGQPSLRLDQITVGGTAA
>NZ_CP049258.1|WP_165168679.1|3499428_3500076_-|invasion-associated-locus-B-family-protein
MPFSTKLLRWPALTVAALLAIAPALAQEEQAPPKNNFGPRNQQGQQAQGQGQGQGGARAQQGPAPQIIATHGDWKIQCTDEPKQGGAQGETERQCGMIQLARSEKNNKVGLTTVFVRGKQNGKDVTMMRIMAPIGVYLPTGVAMEIDGGAVGRIPFMRCLPQICVAFGEAGTQTLDKFRKGTAANFIIYEAPGISMPIKISLNGFAAAYTALGKL
>NZ_CP049258.1|WP_165168680.1|3500352_3501240_+|cytochrome-c-oxidase-subunit-II
MRLSRLWAGSTVALALSAGTALAEGGSGHAVPWQMGLQPGVTPVAEFIHWFHNFLLLPIITVITLFVLGLLIYVMVKFNAKANPVPSKTTHNTTIEVLWTVIPIVILVVIAIPSFRLLYLQRDMPQGDMTIKVIGNPSWNWTYEYPDLGTNEDGSAKVSFTAYLKAKDKLEPTDTWLLSTDVPVVVPVNKTVRLHVTSDPEGIIHAWTIPAFGMKIDAIPGRLNEDWFKATKEGVYYGQCSELCGKDHAFMPIEVHVVSQADFDAWAEKIKTAGADEARSYLFALLKAKGRLAQK
>NZ_CP049258.1|WP_165168681.1|3501281_3502931_+|cytochrome-c-oxidase-subunit-I
MAHAATAHDDHGHPTGWRRYVYSTNHKDIGTMYLWFAIFAGVIGGILSILMRIELQQPGIQIFHGLAAMVYGGEADASIDAGKHMFNVFVTAHGLLMIFFMVMPAMIGGYGNWFVPLMIGAPDMAFPRMNNVSFWLLPPALALLLISMFVEGPAGAHGVGGGWTIYPPLSTTGQPGPAMDFAILALHIAGASSILGAINFITTIFNMRAPGMTLHKMPLFVWSILVTVFLLLLALPVLAGAITMLLTDRNFGTSFFVPSKGGDPVLFQHLFWFFGHPEVYILILPGFGIVSQIVSTFSRKPVFGYLGMAYAMVAIGVVGFVVWAHHMYTVGMDADTQAYFVAATMIIAVPTGVKIFSWIATMWGGSIEFRTPMLWAIGFIFLFTVGGVTGVVLANAGADRSLHDTYYVVAHFHYVLSLGAVFAIFGAWYYWFPKMTGYMYSESIGKAHFWIQFIGVNLIFFPQHFLGLAGMPRRYIDYPEVYAGWNWVSSIGSYISAFSVLIFLYGVFQAYAKKQKAADNPWGEGATTLEWTLSSPPPFHQFSTLPVIR

Crispr_ID: NZ_CP049258_5

• CRISPR_ID: NZ_CP049258_5
• CRISPR_location: 4653969-4656848
• CRISPR_type: TypeI-E
• Repeat_type: I-E
• Spacer_info: 47 spacers
• Cas_protein_info: cas6e,cas5,cas7,cse2gr11,cas8e,cas3

Consensus repeat of NZ_CP049258_5

Consensus_repeat	Method
GCGTTCCCCGCACACGCGGGGATGAACCG	CRISPRCasFinder
GCGTTCCCCGCACACGCGGGGATGAACCG	CRT
GCGTTCCCCGCACACGCGGGGATGAACCG	PILER-CR
AGCGTTCCCCGCACACGCGGGGATGAACCGGTG	PILER-CR
GCGTTCCCCGCACACGCGGGGATGAACCG	PILER-CR

spacers of NZ_CP049258_5

>5.1|4653998|30|NZ_CP049258|CRISPRCasFinder,CRT
GTGTTCCAAGTGAAGGTCCTGCCGCGCTTG
>5.2|4654057|32|NZ_CP049258|CRISPRCasFinder,CRT
TCGTTGATCTCGGCCCGAGCCTCCATGACCAT
>5.3|4654118|32|NZ_CP049258|CRISPRCasFinder,CRT
ATGCTCAAATCCTTCAATGTCCGCGAGCTGGC
>5.4|4654179|32|NZ_CP049258|CRISPRCasFinder,CRT
CGCTCCCACTTCTTCGTTACGCTGTTGACGCC
>5.5|4654240|32|NZ_CP049258|CRISPRCasFinder,CRT
AGCCGGAAGCAGTACTCGGTAACTCGCAAATA
>5.6|4654301|32|NZ_CP049258|CRISPRCasFinder,CRT
GCATCGCTCATACCGTCGTTGTCGCTGTCCGT
>5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT
TGCTCGATGTCGGTCTGCATCGAATAACGCTC
>5.8|4654423|32|NZ_CP049258|CRISPRCasFinder,CRT
ACAGTCCGGTGGGCTTGCTGCCCGGCTGGAAG
>5.9|4654484|32|NZ_CP049258|CRISPRCasFinder,CRT
TCTTCGAGGTCCGTCATACGCTGCTCGTAGGC
>5.10|4654545|31|NZ_CP049258|CRISPRCasFinder,CRT
TCAATCGCGCGCCGATCGACAGCGTTCAGAC
>5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT
TCATCGCCGAGATCATTTTCATGGAGGCGAGC
>5.12|4654666|32|NZ_CP049258|CRISPRCasFinder,CRT
TACGCACAGCACAACGCCACCGATGCCTGGTG
>5.13|4654727|32|NZ_CP049258|CRISPRCasFinder,CRT
GTTCACCATAGTCATTTCGTTTTCGAGGATCA
>5.14|4654788|32|NZ_CP049258|CRISPRCasFinder,CRT
CGAAGCATGGCGATGTAATCCTCTGTGCCAAG
>5.15|4654849|19|NZ_CP049258|CRISPRCasFinder,CRT
GCCCGCTCTGACGATCGTC
>5.16|4654897|32|NZ_CP049258|CRISPRCasFinder,CRT
CCTGTTGGGCCGAGGCCGTTTCATAAAATGAT
>5.17|4654958|32|NZ_CP049258|CRISPRCasFinder,CRT
TCGTCACAGGCCAGCGCCGCACGTGGGATCCC
>5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT
GAGGTGCGCAGGATCAAGTCCTTCACAGGGAG
>5.19|4655080|32|NZ_CP049258|CRISPRCasFinder,CRT
AAAAAGCGGCAAGCGTCGTCTTACGCCTAAGC
>5.20|4655141|32|NZ_CP049258|CRISPRCasFinder,CRT
GAACGCATCCTTGGGATTGTGGGCCTTGCCAT
>5.21|4655202|32|NZ_CP049258|CRISPRCasFinder,CRT
ATGTCCCCCGCTCCTCGCCTCCACGAGAACGA
>5.22|4655263|32|NZ_CP049258|CRISPRCasFinder,CRT
GTCATGGGCGATTCCATGGACCTGGAACACTT
>5.23|4655324|32|NZ_CP049258|CRISPRCasFinder,CRT
GACAATCCATGTCTATAGTGACGTTGAAATTT
>5.24|4655385|33|NZ_CP049258|CRISPRCasFinder,CRT
AGGTTTGCTCCTTGCCCAGGAACAATTGCCTGC
>5.25|4655447|32|NZ_CP049258|CRISPRCasFinder,CRT,PILER-CR
CGGTAGGATCGACACCATATTTACGCTCAGGA
>5.26|4655508|32|NZ_CP049258|CRISPRCasFinder,CRT,PILER-CR
GCGAGGAAGACGTAGACCCGATCCTCCTCCCA
>5.27|4655569|32|NZ_CP049258|CRISPRCasFinder,CRT,PILER-CR
AGCCGGTAATGGTCTTTGACACCAGATCGGGG
>5.28|4655630|32|NZ_CP049258|CRISPRCasFinder,CRT
GCAGAACAGCCTAAGCGCTCATGGAGTGATAT
>5.29|4655691|31|NZ_CP049258|CRISPRCasFinder,CRT
CCCAATGCGAGGGCTAGCTTTGGATCGCTGA
>5.30|4655751|32|NZ_CP049258|CRISPRCasFinder,CRT
ACGCTGGATAGTGGCCTGGACAGGCTGGGTAA
>5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT
CCGAGCTTGCCCAGCTCGTTTTCATCGTTGAT
>5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT
ACCTCGATCGGCGTCGGCGCAAAGCTCTCTGG
>5.33|4655934|32|NZ_CP049258|CRISPRCasFinder,CRT
GTTCTACCTGTCATCCGCCTTGCATCCTAAAA
>5.34|4655995|32|NZ_CP049258|CRISPRCasFinder,CRT
GTGCAACGGCAATTCGTCGAATACCTGCGCCA
>5.35|4656056|32|NZ_CP049258|CRISPRCasFinder,CRT
GTGAAGCGCTTGTGCAGCCCAGCCAGGTCTTC
>5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT
ATGTCGGCGATGCGCTGCACCTGAGCGAACTT
>5.37|4656178|32|NZ_CP049258|CRISPRCasFinder,CRT
TACTTGACCAAGAGCAGTGAAGCGAGGGTTCG
>5.38|4656239|32|NZ_CP049258|CRISPRCasFinder,CRT
TACCGGTTGGACGCCGCCGCCTGCCTCTCTGC
>5.39|4656300|32|NZ_CP049258|CRISPRCasFinder,CRT
GCTGGACGGCGGTTCGTCCGCGCGATCAAGAG
>5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT
ATTTTCGACATCTTCACGGGCCAGGAAATAAA
>5.41|4656422|32|NZ_CP049258|CRISPRCasFinder,CRT
GAAACCGCTTACCAGACCGCGAAGACCGGCGA
>5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT
ATATCGGGAATATCTTCGCTTGTTGCTTTCTG
>5.43|4656544|32|NZ_CP049258|CRISPRCasFinder,CRT
TTCAGCGGCCGGCCTGAAGTCTCGCGATGAAG
>5.44|4656605|32|NZ_CP049258|CRISPRCasFinder,CRT,PILER-CR
AAGCACAACCCCGCGCGGCCGCATGACCGTTA
>5.45|4656666|32|NZ_CP049258|CRISPRCasFinder,CRT,PILER-CR
CGTAGACAGGTATTTGCGAGTTACCGAGTACG
>5.46|4656727|32|NZ_CP049258|CRISPRCasFinder,CRT,PILER-CR
ATGAAGGTGCACGACAAGGAATACGTGGCAAT
>5.47|4656788|32|NZ_CP049258|CRISPRCasFinder,CRT,PILER-CR
ACCTGCCATGACACGGTGAAGCAGAAGGAAGA
>5.48|4655938|28|NZ_CP049258|PILER-CR
CTACCTGTCATCCGCCTTGCATCCTAAA
>5.49|4655999|28|NZ_CP049258|PILER-CR
CAACGGCAATTCGTCGAATACCTGCGCC

CRISPR arrays and Neighbor proteins around NZ_CP049258_5

CRISPR arrays

The CRISPR arrays of NZ_CP049258_5

>merge|NZ_CP049258|5|4653969-4656848|CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR
GCGCTTTCCACACACGCTGGAAAGAATCGGTGTTCCAAGTGAAGGTCCTGCCGCGCTTGCGCTTCTACACGCACGCGGGGATGAACCGTCGTTGATCTCGGCCCGAGCCTCCATGACCATGCGTTCCCCGCTCATGCGGGGATGAGCCGATGCTCAAATCCTTCAATGTCCGCGAGCTGGCGCGTTCTCCGCACACGCGGGGATGAACCGCGCTCCCACTTCTTCGTTACGCTGTTGACGCCGCGTTCCTCGCACACGCGGGGATGAACCGAGCCGGAAGCAGTACTCGGTAACTCGCAAATAGCGTTCCCCGCACACGCGGGGATGAACCGGCATCGCTCATACCGTCGTTGTCGCTGTCCGTGCGTTTCCCGCACACGCTGGGATGAACCGTGCTCGATGTCGGTCTGCATCGAATAACGCTCGCGTTCCCCTCAAACGCGGGGATGAACCGACAGTCCGGTGGGCTTGCTGCCCGGCTGGAAGGCGTTCCCCGCACACGCGGGGATGAACCGTCTTCGAGGTCCGTCATACGCTGCTCGTAGGCGCGTTCCCCGCACACGCGGGATGAACCGGTCAATCGCGCGCCGATCGACAGCGTTCAGACGCGTTCCCCGCACATGCGGGGATGAACCGTCATCGCCGAGATCATTTTCATGGAGGCGAGCGCGTACTCCGCACACGCGGAGATGAACCGTACGCACAGCACAACGCCACCGATGCCTGGTGGCGTTCTCCGCACACGCGGGGATGAACCGGTTCACCATAGTCATTTCGTTTTCGAGGATCAGTGTTCTCCGCATGCAGGGGGATGACCCGCGAAGCATGGCGATGTAATCCTCTGTGCCAAGGCGTTCCCCACACACGCGGGGATGAACCGGCCCGCTCTGACGATCGTCGCTTTCTCCGCATGCGCGGGGATGAACCGCCTGTTGGGCCGAGGCCGTTTCATAAAATGATGCGTTCTCCGCACGCGCGAGGATGAACCGTCGTCACAGGCCAGCGCCGCACGTGGGATCCCACGTTCTCCGCACACGCGGAGATAAACCGGAGGTGCGCAGGATCAAGTCCTTCACAGGGAGGCGTTCTCCGTACACGCGAGGATGAACCGAAAAAGCGGCAAGCGTCGTCTTACGCCTAAGCGCGTTTCCCGCGCACGCGGGGATAAACCGGAACGCATCCTTGGGATTGTGGGCCTTGCCATGCGTTCCCCGCACACGCGGGGATGAACCGATGTCCCCCGCTCCTCGCCTCCACGAGAACGAGCGTTCCCCGCACATGCGGGGATGAACCGGTCATGGGCGATTCCATGGACCTGGAACACTTGCGTTCCCCGCACACGCGGGGATGAACCTGACAATCCATGTCTATAGTGACGTTGAAATTTACGTTCCCCGTACACGCGGGAATGAACCGAGGTTTGCTCCTTGCCCAGGAACAATTGCCTGCGCGTACCCCGCACACGCGGGGATGAACCGCGGTAGGATCGACACCATATTTACGCTCAGGAGCGTTCTCCGCACGCGCGGGGATGAACCGGCGAGGAAGACGTAGACCCGATCCTCCTCCCAGCGTTCCCCGCACACGCGGGGATGAACCGAGCCGGTAATGGTCTTTGACACCAGATCGGGGGCGTTCCCCGCACACGCGGGGATGAACCGGCAGAACAGCCTAAGCGCTCATGGAGTGATATGCGTTCCCCGCACACGCGGGATGAACCGACCCAATGCGAGGGCTAGCTTTGGATCGCTGAGCGTTCCCTGCACACGCGGTGATGAATCGACGCTGGATAGTGGCCTGGACAGGCTGGGTAAGCGTTCTCCGCACTCTCGGGGATGAACCGCCGAGCTTGCCCAGCTCGTTTTCATCGTTGATGCGTTCCCCGCATACGCGGAGATGAACCGACCTCGATCGGCGTCGGCGCAAAGCTCTCTGGGCGTTCCCCGCACACGCGGGGATGAACCGGTTCTACCTGTCATCCGCCTTGCATCCTAAAAGCGTTCCCCGCACACGCGGGGATGAACCGGTGCAACGGCAATTCGTCGAATACCTGCGCCAGCGTTCCCGGCACACGCGGGGATGAATCGGTGAAGCGCTTGTGCAGCCCAGCCAGGTCTTCGTGTTCCCCGCACACGCAGGGATGAACCGATGTCGGCGATGCGCTGCACCTGAGCGAACTTGCGTTCTCCGCACACGCGGGGATGCACCGTACTTGACCAAGAGCAGTGAAGCGAGGGTTCGGCGTTCCCCGCACACGCGGGGATGAACCGTACCGGTTGGACGCCGCCGCCTGCCTCTCTGCGCGTTCCCCGCACACGCGGGGATGAACCGGCTGGACGGCGGTTCGTCCGCGCGATCAAGAGGCGTTCCCCGCACACGCGGGGATGAACCAATTTTCGACATCTTCACGGGCCAGGAAATAAAGCGTTCTCCGTACAGGCGGAGATGAACCGGAAACCGCTTACCAGACCGCGAAGACCGGCGAGCGTTCCCCGCACACGCGGGGATGAACCGATATCGGGAATATCTTCGCTTGTTGCTTTCTGGCGTTTCCCGCGCGCGCGGGGATCAACCGTTCAGCGGCCGGCCTGAAGTCTCGCGATGAAGGCGTTCCCCGCACACGCGGGGATGAACCGAAGCACAACCCCGCGCGGCCGCATGACCGTTAGCGTTCCCCGCACACGCGGGGATGAACCGCGTAGACAGGTATTTGCGAGTTACCGAGTACGGCATTCCCCGCACACGCGGGGATGAACCGATGAAGGTGCACGACAAGGAATACGTGGCAATGCGTTCCCCGCACACGCGGGGATGAACCGACCTGCCATGACACGGTGAAGCAGAAGGAAGAGCGCTCCCCGCACACGCGGGGATGAACCG

>NZ_CP049258|5|5|4653969-4656848|CRISPRCasFinder
GCGCTTTCCACACACGCTGGAAAGAATCG	GTGTTCCAAGTGAAGGTCCTGCCGCGCTTG
CGCTTCTACACGCACGCGGGGATGAACCG	TCGTTGATCTCGGCCCGAGCCTCCATGACCAT
GCGTTCCCCGCTCATGCGGGGATGAGCCG	ATGCTCAAATCCTTCAATGTCCGCGAGCTGGC
GCGTTCTCCGCACACGCGGGGATGAACCG	CGCTCCCACTTCTTCGTTACGCTGTTGACGCC
GCGTTCCTCGCACACGCGGGGATGAACCG	AGCCGGAAGCAGTACTCGGTAACTCGCAAATA
GCGTTCCCCGCACACGCGGGGATGAACCG	GCATCGCTCATACCGTCGTTGTCGCTGTCCGT
GCGTTTCCCGCACACGCTGGGATGAACCG	TGCTCGATGTCGGTCTGCATCGAATAACGCTC
GCGTTCCCCTCAAACGCGGGGATGAACCG	ACAGTCCGGTGGGCTTGCTGCCCGGCTGGAAG
GCGTTCCCCGCACACGCGGGGATGAACCG	TCTTCGAGGTCCGTCATACGCTGCTCGTAGGC
GCGTTCCCCGCACACGCGGGATGAACCGG	TCAATCGCGCGCCGATCGACAGCGTTCAGAC
GCGTTCCCCGCACATGCGGGGATGAACCG	TCATCGCCGAGATCATTTTCATGGAGGCGAGC
GCGTACTCCGCACACGCGGAGATGAACCG	TACGCACAGCACAACGCCACCGATGCCTGGTG
GCGTTCTCCGCACACGCGGGGATGAACCG	GTTCACCATAGTCATTTCGTTTTCGAGGATCA
GTGTTCTCCGCATGCAGGGGGATGACCCG	CGAAGCATGGCGATGTAATCCTCTGTGCCAAG
GCGTTCCCCACACACGCGGGGATGAACCG	GCCCGCTCTGACGATCGTC
GCTTTCTCCGCATGCGCGGGGATGAACCG	CCTGTTGGGCCGAGGCCGTTTCATAAAATGAT
GCGTTCTCCGCACGCGCGAGGATGAACCG	TCGTCACAGGCCAGCGCCGCACGTGGGATCCC
ACGTTCTCCGCACACGCGGAGATAAACCG	GAGGTGCGCAGGATCAAGTCCTTCACAGGGAG
GCGTTCTCCGTACACGCGAGGATGAACCG	AAAAAGCGGCAAGCGTCGTCTTACGCCTAAGC
GCGTTTCCCGCGCACGCGGGGATAAACCG	GAACGCATCCTTGGGATTGTGGGCCTTGCCAT
GCGTTCCCCGCACACGCGGGGATGAACCG	ATGTCCCCCGCTCCTCGCCTCCACGAGAACGA
GCGTTCCCCGCACATGCGGGGATGAACCG	GTCATGGGCGATTCCATGGACCTGGAACACTT
GCGTTCCCCGCACACGCGGGGATGAACCT	GACAATCCATGTCTATAGTGACGTTGAAATTT
ACGTTCCCCGTACACGCGGGAATGAACCG	AGGTTTGCTCCTTGCCCAGGAACAATTGCCTGC
GCGTACCCCGCACACGCGGGGATGAACCG	CGGTAGGATCGACACCATATTTACGCTCAGGA
GCGTTCTCCGCACGCGCGGGGATGAACCG	GCGAGGAAGACGTAGACCCGATCCTCCTCCCA
GCGTTCCCCGCACACGCGGGGATGAACCG	AGCCGGTAATGGTCTTTGACACCAGATCGGGG
GCGTTCCCCGCACACGCGGGGATGAACCG	GCAGAACAGCCTAAGCGCTCATGGAGTGATAT
GCGTTCCCCGCACACGCGGGATGAACCGA	CCCAATGCGAGGGCTAGCTTTGGATCGCTGA
GCGTTCCCTGCACACGCGGTGATGAATCG	ACGCTGGATAGTGGCCTGGACAGGCTGGGTAA
GCGTTCTCCGCACTCTCGGGGATGAACCG	CCGAGCTTGCCCAGCTCGTTTTCATCGTTGAT
GCGTTCCCCGCATACGCGGAGATGAACCG	ACCTCGATCGGCGTCGGCGCAAAGCTCTCTGG
GCGTTCCCCGCACACGCGGGGATGAACCG	GTTCTACCTGTCATCCGCCTTGCATCCTAAAA
GCGTTCCCCGCACACGCGGGGATGAACCG	GTGCAACGGCAATTCGTCGAATACCTGCGCCA
GCGTTCCCGGCACACGCGGGGATGAATCG	GTGAAGCGCTTGTGCAGCCCAGCCAGGTCTTC
GTGTTCCCCGCACACGCAGGGATGAACCG	ATGTCGGCGATGCGCTGCACCTGAGCGAACTT
GCGTTCTCCGCACACGCGGGGATGCACCG	TACTTGACCAAGAGCAGTGAAGCGAGGGTTCG
GCGTTCCCCGCACACGCGGGGATGAACCG	TACCGGTTGGACGCCGCCGCCTGCCTCTCTGC
GCGTTCCCCGCACACGCGGGGATGAACCG	GCTGGACGGCGGTTCGTCCGCGCGATCAAGAG
GCGTTCCCCGCACACGCGGGGATGAACCA	ATTTTCGACATCTTCACGGGCCAGGAAATAAA
GCGTTCTCCGTACAGGCGGAGATGAACCG	GAAACCGCTTACCAGACCGCGAAGACCGGCGA
GCGTTCCCCGCACACGCGGGGATGAACCG	ATATCGGGAATATCTTCGCTTGTTGCTTTCTG
GCGTTTCCCGCGCGCGCGGGGATCAACCG	TTCAGCGGCCGGCCTGAAGTCTCGCGATGAAG
GCGTTCCCCGCACACGCGGGGATGAACCG	AAGCACAACCCCGCGCGGCCGCATGACCGTTA
GCGTTCCCCGCACACGCGGGGATGAACCG	CGTAGACAGGTATTTGCGAGTTACCGAGTACG
GCATTCCCCGCACACGCGGGGATGAACCG	ATGAAGGTGCACGACAAGGAATACGTGGCAAT
GCGTTCCCCGCACACGCGGGGATGAACCG	ACCTGCCATGACACGGTGAAGCAGAAGGAAGA
GCGCTCCCCGCACACGCGGGGATGAACCG

>NZ_CP049258|5|2|4653969-4656848|CRT
GCGCTTTCCACACACGCTGGAAAGAATCG	GTGTTCCAAGTGAAGGTCCTGCCGCGCTTG
CGCTTCTACACGCACGCGGGGATGAACCG	TCGTTGATCTCGGCCCGAGCCTCCATGACCAT
GCGTTCCCCGCTCATGCGGGGATGAGCCG	ATGCTCAAATCCTTCAATGTCCGCGAGCTGGC
GCGTTCTCCGCACACGCGGGGATGAACCG	CGCTCCCACTTCTTCGTTACGCTGTTGACGCC
GCGTTCCTCGCACACGCGGGGATGAACCG	AGCCGGAAGCAGTACTCGGTAACTCGCAAATA
GCGTTCCCCGCACACGCGGGGATGAACCG	GCATCGCTCATACCGTCGTTGTCGCTGTCCGT
GCGTTTCCCGCACACGCTGGGATGAACCG	TGCTCGATGTCGGTCTGCATCGAATAACGCTC
GCGTTCCCCTCAAACGCGGGGATGAACCG	ACAGTCCGGTGGGCTTGCTGCCCGGCTGGAAG
GCGTTCCCCGCACACGCGGGGATGAACCG	TCTTCGAGGTCCGTCATACGCTGCTCGTAGGC
GCGTTCCCCGCACACGCGGGATGAACCGG	TCAATCGCGCGCCGATCGACAGCGTTCAGAC
GCGTTCCCCGCACATGCGGGGATGAACCG	TCATCGCCGAGATCATTTTCATGGAGGCGAGC
GCGTACTCCGCACACGCGGAGATGAACCG	TACGCACAGCACAACGCCACCGATGCCTGGTG
GCGTTCTCCGCACACGCGGGGATGAACCG	GTTCACCATAGTCATTTCGTTTTCGAGGATCA
GTGTTCTCCGCATGCAGGGGGATGACCCG	CGAAGCATGGCGATGTAATCCTCTGTGCCAAG
GCGTTCCCCACACACGCGGGGATGAACCG	GCCCGCTCTGACGATCGTC
GCTTTCTCCGCATGCGCGGGGATGAACCG	CCTGTTGGGCCGAGGCCGTTTCATAAAATGAT
GCGTTCTCCGCACGCGCGAGGATGAACCG	TCGTCACAGGCCAGCGCCGCACGTGGGATCCC
ACGTTCTCCGCACACGCGGAGATAAACCG	GAGGTGCGCAGGATCAAGTCCTTCACAGGGAG
GCGTTCTCCGTACACGCGAGGATGAACCG	AAAAAGCGGCAAGCGTCGTCTTACGCCTAAGC
GCGTTTCCCGCGCACGCGGGGATAAACCG	GAACGCATCCTTGGGATTGTGGGCCTTGCCAT
GCGTTCCCCGCACACGCGGGGATGAACCG	ATGTCCCCCGCTCCTCGCCTCCACGAGAACGA
GCGTTCCCCGCACATGCGGGGATGAACCG	GTCATGGGCGATTCCATGGACCTGGAACACTT
GCGTTCCCCGCACACGCGGGGATGAACCT	GACAATCCATGTCTATAGTGACGTTGAAATTT
ACGTTCCCCGTACACGCGGGAATGAACCG	AGGTTTGCTCCTTGCCCAGGAACAATTGCCTGC
GCGTACCCCGCACACGCGGGGATGAACCG	CGGTAGGATCGACACCATATTTACGCTCAGGA
GCGTTCTCCGCACGCGCGGGGATGAACCG	GCGAGGAAGACGTAGACCCGATCCTCCTCCCA
GCGTTCCCCGCACACGCGGGGATGAACCG	AGCCGGTAATGGTCTTTGACACCAGATCGGGG
GCGTTCCCCGCACACGCGGGGATGAACCG	GCAGAACAGCCTAAGCGCTCATGGAGTGATAT
GCGTTCCCCGCACACGCGGGATGAACCGA	CCCAATGCGAGGGCTAGCTTTGGATCGCTGA
GCGTTCCCTGCACACGCGGTGATGAATCG	ACGCTGGATAGTGGCCTGGACAGGCTGGGTAA
GCGTTCTCCGCACTCTCGGGGATGAACCG	CCGAGCTTGCCCAGCTCGTTTTCATCGTTGAT
GCGTTCCCCGCATACGCGGAGATGAACCG	ACCTCGATCGGCGTCGGCGCAAAGCTCTCTGG
GCGTTCCCCGCACACGCGGGGATGAACCG	GTTCTACCTGTCATCCGCCTTGCATCCTAAAA
GCGTTCCCCGCACACGCGGGGATGAACCG	GTGCAACGGCAATTCGTCGAATACCTGCGCCA
GCGTTCCCGGCACACGCGGGGATGAATCG	GTGAAGCGCTTGTGCAGCCCAGCCAGGTCTTC
GTGTTCCCCGCACACGCAGGGATGAACCG	ATGTCGGCGATGCGCTGCACCTGAGCGAACTT
GCGTTCTCCGCACACGCGGGGATGCACCG	TACTTGACCAAGAGCAGTGAAGCGAGGGTTCG
GCGTTCCCCGCACACGCGGGGATGAACCG	TACCGGTTGGACGCCGCCGCCTGCCTCTCTGC
GCGTTCCCCGCACACGCGGGGATGAACCG	GCTGGACGGCGGTTCGTCCGCGCGATCAAGAG
GCGTTCCCCGCACACGCGGGGATGAACCA	ATTTTCGACATCTTCACGGGCCAGGAAATAAA
GCGTTCTCCGTACAGGCGGAGATGAACCG	GAAACCGCTTACCAGACCGCGAAGACCGGCGA
GCGTTCCCCGCACACGCGGGGATGAACCG	ATATCGGGAATATCTTCGCTTGTTGCTTTCTG
GCGTTTCCCGCGCGCGCGGGGATCAACCG	TTCAGCGGCCGGCCTGAAGTCTCGCGATGAAG
GCGTTCCCCGCACACGCGGGGATGAACCG	AAGCACAACCCCGCGCGGCCGCATGACCGTTA
GCGTTCCCCGCACACGCGGGGATGAACCG	CGTAGACAGGTATTTGCGAGTTACCGAGTACG
GCATTCCCCGCACACGCGGGGATGAACCG	ATGAAGGTGCACGACAAGGAATACGTGGCAAT
GCGTTCCCCGCACACGCGGGGATGAACCG	ACCTGCCATGACACGGTGAAGCAGAAGGAAGA
GCGCTCCCCGCACACGCGGGGATGAACCG

>NZ_CP049258|5|2|4655418-4655629|PILER-CR
GCGTACCCCGCACACGCGGGGATGAACCG	CGGTAGGATCGACACCATATTTACGCTCAGGA
GCGTTCTCCGCACGCGCGGGGATGAACCG	GCGAGGAAGACGTAGACCCGATCCTCCTCCCA
GCGTTCCCCGCACACGCGGGGATGAACCG	AGCCGGTAATGGTCTTTGACACCAGATCGGGG
GCGTTCCCCGCACACGCGGGGATGAACCGGCAGAACAGCCTAAGCGCTCATGGAGTGATATGCGTTCCCCGCACACGCGGGATGAACCGACCCAATGCGAGGGCTAGCTTTGGATCGCTGAGCGTTCCCTGCACACGCGGTGATGAATCGACGCTGGATAGTGGCCTGGACAGGCTGGGTAAGCGTTCTCCGCACTCTCGGGGATGAACCGCCGAGCTTGCCCAGCTCGTTTTCATCGTTGATGCGTTCCCCGCATACGCGGAGATGAACCGACCTCGATCGGCGTCGGCGCAAAGCTCTCTGGGCGTTCCCCGCACACGCGGGGATGAACCGGTTC	TACCTGTCATCCGCCTTGCATCCTAAAA
GCGTTCCCCGCACACGCGGGGATGAACCGGTGC	AACGGCAATTCGTCGAATACCTGCGCCA
GCGTTCCCGGCACACGCGGGGATGAATCGGTGAAGCGCTTGTGCAGCCCAGCCAGGTCTTCGTGTTCCCCGCACACGCAGGGATGAACCGATGTCGGCGATGCGCTGCACCTGAGCGAACTTGCGTTCTCCGCACACGCGGGGATGCACCGTACTTGACCAAGAGCAGTGAAGCGAGGGTTCGGCGTTCCCCGCACACGCGGGGATGAACCGTACCGGTTGGACGCCGCCGCCTGCCTCTCTGCGCGTTCCCCGCACACGCGGGGATGAACCGGCTGGACGGCGGTTCGTCCGCGCGATCAAGAGGCGTTCCCCGCACACGCGGGGATGAACCAATTTTCGACATCTTCACGGGCCAGGAAATAAAGCGTTCTCCGTACAGGCGGAGATGAACCGGAAACCGCTTACCAGACCGCGAAGACCGGCGAGCGTTCCCCGCACACGCGGGGATGAACCGATATCGGGAATATCTTCGCTTGTTGCTTTCTGGCGTTTCCCGCGCGCGCGGGGATCAACCGTTCAGCGGCCGGCCTGAAGTCTCGCGATGAAGGCGTTCCCCGCACACGCGGGGATGAACCG	AAGCACAACCCCGCGCGGCCGCATGACCGTTA
GCGTTCCCCGCACACGCGGGGATGAACCG	CGTAGACAGGTATTTGCGAGTTACCGAGTACG
GCATTCCCCGCACACGCGGGGATGAACCG	ATGAAGGTGCACGACAAGGAATACGTGGCAAT
GCGTTCCCCGCACACGCGGGGATGAACCG	ACCTGCCATGACACGGTGAAGCAGAAGGAAGA


>NZ_CP049258|5|3|4655905-4656058|PILER-CR
	CGGTAGGATCGACACCATATTTACGCTCAGGA
GCGTTCTCCGCACGCGCGGGGATGAACCG	GCGAGGAAGACGTAGACCCGATCCTCCTCCCA
GCGTTCCCCGCACACGCGGGGATGAACCG	AGCCGGTAATGGTCTTTGACACCAGATCGGGG
GCGTTCCCCGCACACGCGGGGATGAACCGGCAGAACAGCCTAAGCGCTCATGGAGTGATATGCGTTCCCCGCACACGCGGGATGAACCGACCCAATGCGAGGGCTAGCTTTGGATCGCTGAGCGTTCCCTGCACACGCGGTGATGAATCGACGCTGGATAGTGGCCTGGACAGGCTGGGTAAGCGTTCTCCGCACTCTCGGGGATGAACCGCCGAGCTTGCCCAGCTCGTTTTCATCGTTGATGCGTTCCCCGCATACGCGGAGATGAACCGACCTCGATCGGCGTCGGCGCAAAGCTCTCTGGGCGTTCCCCGCACACGCGGGGATGAACCGGTTC	TACCTGTCATCCGCCTTGCATCCTAAAA
GCGTTCCCCGCACACGCGGGGATGAACCGGTGC	AACGGCAATTCGTCGAATACCTGCGCCA
GCGTTCCCGGCACACGCGGGGATGAATCGGTGAAGCGCTTGTGCAGCCCAGCCAGGTCTTCGTGTTCCCCGCACACGCAGGGATGAACCGATGTCGGCGATGCGCTGCACCTGAGCGAACTTGCGTTCTCCGCACACGCGGGGATGCACCGTACTTGACCAAGAGCAGTGAAGCGAGGGTTCGGCGTTCCCCGCACACGCGGGGATGAACCGTACCGGTTGGACGCCGCCGCCTGCCTCTCTGCGCGTTCCCCGCACACGCGGGGATGAACCGGCTGGACGGCGGTTCGTCCGCGCGATCAAGAGGCGTTCCCCGCACACGCGGGGATGAACCAATTTTCGACATCTTCACGGGCCAGGAAATAAAGCGTTCTCCGTACAGGCGGAGATGAACCGGAAACCGCTTACCAGACCGCGAAGACCGGCGAGCGTTCCCCGCACACGCGGGGATGAACCGATATCGGGAATATCTTCGCTTGTTGCTTTCTGGCGTTTCCCGCGCGCGCGGGGATCAACCGTTCAGCGGCCGGCCTGAAGTCTCGCGATGAAGGCGTTCCCCGCACACGCGGGGATGAACCG	AAGCACAACCCCGCGCGGCCGCATGACCGTTA
GCGTTCCCCGCACACGCGGGGATGAACCG	CGTAGACAGGTATTTGCGAGTTACCGAGTACG
GCATTCCCCGCACACGCGGGGATGAACCG	ATGAAGGTGCACGACAAGGAATACGTGGCAAT
GCGTTCCCCGCACACGCGGGGATGAACCG	ACCTGCCATGACACGGTGAAGCAGAAGGAAGA


>NZ_CP049258|5|4|4656576-4656848|PILER-CR
	CGGTAGGATCGACACCATATTTACGCTCAGGA
GCGTTCTCCGCACGCGCGGGGATGAACCG	GCGAGGAAGACGTAGACCCGATCCTCCTCCCA
GCGTTCCCCGCACACGCGGGGATGAACCG	AGCCGGTAATGGTCTTTGACACCAGATCGGGG
GCGTTCCCCGCACACGCGGGGATGAACCGGCAGAACAGCCTAAGCGCTCATGGAGTGATATGCGTTCCCCGCACACGCGGGATGAACCGACCCAATGCGAGGGCTAGCTTTGGATCGCTGAGCGTTCCCTGCACACGCGGTGATGAATCGACGCTGGATAGTGGCCTGGACAGGCTGGGTAAGCGTTCTCCGCACTCTCGGGGATGAACCGCCGAGCTTGCCCAGCTCGTTTTCATCGTTGATGCGTTCCCCGCATACGCGGAGATGAACCGACCTCGATCGGCGTCGGCGCAAAGCTCTCTGGGCGTTCCCCGCACACGCGGGGATGAACCGGTTC	TACCTGTCATCCGCCTTGCATCCTAAAA
GCGTTCCCCGCACACGCGGGGATGAACCGGTGC	AACGGCAATTCGTCGAATACCTGCGCCA
GCGTTCCCGGCACACGCGGGGATGAATCGGTGAAGCGCTTGTGCAGCCCAGCCAGGTCTTCGTGTTCCCCGCACACGCAGGGATGAACCGATGTCGGCGATGCGCTGCACCTGAGCGAACTTGCGTTCTCCGCACACGCGGGGATGCACCGTACTTGACCAAGAGCAGTGAAGCGAGGGTTCGGCGTTCCCCGCACACGCGGGGATGAACCGTACCGGTTGGACGCCGCCGCCTGCCTCTCTGCGCGTTCCCCGCACACGCGGGGATGAACCGGCTGGACGGCGGTTCGTCCGCGCGATCAAGAGGCGTTCCCCGCACACGCGGGGATGAACCAATTTTCGACATCTTCACGGGCCAGGAAATAAAGCGTTCTCCGTACAGGCGGAGATGAACCGGAAACCGCTTACCAGACCGCGAAGACCGGCGAGCGTTCCCCGCACACGCGGGGATGAACCGATATCGGGAATATCTTCGCTTGTTGCTTTCTGGCGTTTCCCGCGCGCGCGGGGATCAACCGTTCAGCGGCCGGCCTGAAGTCTCGCGATGAAGGCGTTCCCCGCACACGCGGGGATGAACCG	AAGCACAACCCCGCGCGGCCGCATGACCGTTA
GCGTTCCCCGCACACGCGGGGATGAACCG	CGTAGACAGGTATTTGCGAGTTACCGAGTACG
GCATTCCCCGCACACGCGGGGATGAACCG	ATGAAGGTGCACGACAAGGAATACGTGGCAAT
GCGTTCCCCGCACACGCGGGGATGAACCG	ACCTGCCATGACACGGTGAAGCAGAAGGAAGA
GCGCTCCCCGCACACGCGGGGATGAACCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049258.1|WP_165169675.1|4668847_4670716_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|227903
NZ_CP049258.1|WP_165169662.1|4649121_4650774_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl|CDD|187860
NZ_CP049258.1|WP_165169671.1|4661810_4663604_-|hypothetical-protein	unknown	unknown	gnl|CDD|270916
NZ_CP049258.1|WP_165169674.1|4666846_4668628_-|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl|CDD|227903
NZ_CP049258.1|WP_165169665.1|4652408_4653152_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl|CDD|273842
NZ_CP049258.1|WP_165169666.1|4653148_4653874_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl|CDD|215025
NZ_CP049258.1|WP_165169661.1|4646232_4648887_+|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl|CDD|182031
NZ_CP049258.1|WP_165169659.1|4643538_4643802_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165169668.1|4657942_4658830_-|DMT-family-transporter	unknown	unknown	gnl|CDD|273359
NZ_CP049258.1|WP_165169667.1|4657000_4657879_-|DMT-family-transporter	unknown	unknown	gnl|CDD|273359
NZ_CP049258.1|WP_165174219.1|4658826_4659648_-|DMT-family-transporter	unknown	unknown	gnl|CDD|223769
NZ_CP049258.1|WP_165169660.1|4644013_4645411_+|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl|CDD|366662
NZ_CP049258.1|WP_165169670.1|4660977_4661796_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|366444
NZ_CP049258.1|WP_165169673.1|4665216_4666815_+|citramalate-synthase	unknown	unknown	gnl|CDD|237068
NZ_CP049258.1|WP_165169669.1|4659967_4660981_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|130256
NZ_CP049258.1|WP_165169664.1|4651350_4652409_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
NZ_CP049258.1|WP_165169663.1|4650770_4651325_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl|CDD|187862
NZ_CP049258.1|WP_165174218.1|4645490_4645790_-|alkylphosphonate-utilization-protein	unknown	unknown	gnl|CDD|225380
NZ_CP049258.1|WP_165169672.1|4663891_4665220_+|cysteine--tRNA-ligase	unknown	unknown	gnl|CDD|234705
NZ_CP049258.1|WP_165169658.1|4643324_4643546_+|DUF2093-domain-containing-protein	unknown	unknown	gnl|CDD|226423

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP049258.1|WP_165169662.1|4649121_4650774_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	1.3e-105	348.8	0.7
NZ_CP049258.1|WP_165169661.1|4646232_4648887_+|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	1.2e-68	226.5	0.0
NZ_CP049258.1|WP_165169664.1|4651350_4652409_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	7.7e-111	365.8	2.3
NZ_CP049258.1|WP_165169663.1|4650770_4651325_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	1e-22	75.6	1.4
NZ_CP049258.1|WP_165169665.1|4652408_4653152_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	8.9e-40	131.1	0.4
NZ_CP049258.1|WP_165169666.1|4653148_4653874_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	1e-46	154.3	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP049258.1|WP_165169675.1|4668847_4670716_-|tetratricopeptide-repeat-protein	gnl|CDD|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	8.06236e-61
NZ_CP049258.1|WP_165169662.1|4649121_4650774_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl|CDD|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	3.43626e-115
NZ_CP049258.1|WP_165169671.1|4661810_4663604_-|hypothetical-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.0301e-33
NZ_CP049258.1|WP_165169674.1|4666846_4668628_-|adenylate/guanylate-cyclase-domain-containing-protein	gnl|CDD|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	6.24425e-68
NZ_CP049258.1|WP_165169665.1|4652408_4653152_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl|CDD|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	6.92303e-28
NZ_CP049258.1|WP_165169670.1|4660977_4661796_+|ABC-transporter-permease	gnl|CDD|366444	pfam01061, ABC2_membrane, ABC-2 type transporter.	1.70866e-16
NZ_CP049258.1|WP_165169661.1|4646232_4648887_+|CRISPR-associated-helicase-Cas3'	gnl|CDD|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.02177e-135
NZ_CP049258.1|WP_165169666.1|4653148_4653874_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.25338e-50
NZ_CP049258.1|WP_165169668.1|4657942_4658830_-|DMT-family-transporter	gnl|CDD|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.94595e-10
NZ_CP049258.1|WP_165169667.1|4657000_4657879_-|DMT-family-transporter	gnl|CDD|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	5.05349e-12
NZ_CP049258.1|WP_165174219.1|4658826_4659648_-|DMT-family-transporter	gnl|CDD|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	2.95003e-08
NZ_CP049258.1|WP_165169660.1|4644013_4645411_+|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl|CDD|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP049258.1|WP_165169673.1|4665216_4666815_+|citramalate-synthase	gnl|CDD|237068	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional.	0
NZ_CP049258.1|WP_165169669.1|4659967_4660981_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|130256	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	6.33264e-120
NZ_CP049258.1|WP_165169664.1|4651350_4652409_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	7.59318e-108
NZ_CP049258.1|WP_165169663.1|4650770_4651325_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl|CDD|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	4.70155e-16
NZ_CP049258.1|WP_165174218.1|4645490_4645790_-|alkylphosphonate-utilization-protein	gnl|CDD|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	9.34047e-35
NZ_CP049258.1|WP_165169672.1|4663891_4665220_+|cysteine--tRNA-ligase	gnl|CDD|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP049258.1|WP_165169658.1|4643324_4643546_+|DUF2093-domain-containing-protein	gnl|CDD|226423	COG3908, COG3908, Uncharacterized protein conserved in bacteria [Function unknown].	1.06224e-27

Protein sequences

>NZ_CP049258.1|WP_165169666.1|4653148_4653874_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTAPSLFLSRATLKADPSIAALGGLLLPDAEDLRLDADHRLMWSLFADDADAQRDFLYRRDPQSPKSPKFYILSHRPPAQNSVLFDVETKPFEPHLTEGDILLFSLLANPTVSQSRPREDGRKPRGRRHDVVMAELSKILPGSRAEARRSIIESAGRGWLERQGAASGFVLDSAALTIDGYDQKVITSPAGKSRKGQIRISLLSFEGQLRVVDPAAFLDRLAKGFGRARAFGCGLMLIRRA
>NZ_CP049258.1|WP_165169665.1|4652408_4653152_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MAEVLFFQLLAPFASFGAIAVGERRETALHPAHSALAGLLAAALGMERSAPEIEAFAANLAFAIRTDKVGAPTADYHTAQTPPSRTGRDKGRGWHSRRDELSGERKTILSRRDYRSDCRFTVAATERDVSVPASSLAAIAQNLRQPLFTLYLGRKSCPLGAPPDPRIIDCGTLADGFTAYDAARAERPLFIGERLILDPIFVTQGLVSEAEITRRQSRRDQVTSRAAWRFDLRDELETPLPRTGVSP
>NZ_CP049258.1|WP_165169664.1|4651350_4652409_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MKRFLQLHLLTFYPPSNLNRDDTGQPKSAIIGGASRLRQSSQSLKRAWRTSEIFQSKLEDHRGDRTQRLGAVIVDHLKGKGLAADKALEIAREIAGAFGKVKAETDKNPAYTEQLAFISREERAAALAYAEKRAAGEKAAESSDLADLLLRKIDTAADIAMFGRMLADSPDFNREAAVQVAHAFTTHQVTVDDDYYTASDDLKKKEEDAGAGFIGETGFGSGVYYLYINIDRALLVKNLGGDKDVARKAVEALVEAAATVGPRGMSARFASFARTHFIIAEAGNVAPRTLAAAFEAPVRGAQGHIAGSIKALETLRERFAKAYGEDTDCRTMDIAKGEGSLKDIVAFAVTGL
>NZ_CP049258.1|WP_165169663.1|4650770_4651325_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTVESESRHLRAREWWRSMTGAKDHSDGKSRPSDRAGLARLRRSGVIAAMAEEPVLRLFRRLGCSDPAELQRVAALACILAHVRRDNPYRFGRQIGRAKFSDDESTAKLKPLRFRRLLAASSDEEIATSFRRAVGLLGGEANVADLSAIILNFGADKVRRRLIFDYYATGGEPDDPAPATPPVA
>NZ_CP049258.1|WP_165169662.1|4649121_4650774_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MSLSASYNLLHEPWLPVRRRSGGTVVWIRPAEITAAPEDPVADFAWGRPDFDAASREFLIGLLATALAPESDDVFDAMWESPPDTVQLDRAFAPFAFGFNLDGDGPRFLQDLDVLEDAEASPVSALLIEAPGANTLKENKDLFQKRGRVPYLGLPAAAIALYTLQTYAPSGGAGHRTSLRGGGPLTTLVEPADPTATLWQKLWLNVPKRKWRKPEKALPLVFPWLAPTVTSDGKPPRQVSPENSHELQSFWGMPRRIRLDFAEDSKSPPCPLTGKPSPRMVASYRTRPYGVMYTAFEHWLSPYYKAKANDTSWLPVHPQPGGIAYRDWPKLASLGTSMARPASCVAIAVAGRLPSLPGFGSRHPRLAATGYDMDNMKARGFVEARMPIFLPKPEWQQQFYQAAANLVASAELVARLTASSVRHAFEGDHGDAKSTPYEGLRERFYAETENEFYGTLRQIEESAAFDGAAWLRILRGTALRLFDEKVPLENLPDKLIDRSVKARAGLTAALAGFGKVGGSFYTYLGLPPPESRPKSPKPARSTRKPSGDKK
>NZ_CP049258.1|WP_165169661.1|4646232_4648887_+|CRISPR-associated-helicase-Cas3'
MEESLHFWSKTRPDGEVRSHPLVYHSLDVAAMFELLLSDRFGYWRVFERSFGAPIAAIAPALTALVALHDLGKVAVGFQAKVEQAWPAALLGAWPGRQNRYDHAEGSARLLVEDGHATFLDGIKGASNRRAVHSLLLAIAYHHGKPMDRIANGTPMSVPKFVRAGDAALVATSILAAFDPSPPLPSIDGRSARTLSWLLSGLVSLADWIGSGRDFAFRLPELSPREYWLNVARPTALAAIARLRLEPAQPSIEPGSTGLLEDGWQATPAQHMAVGLPLPDGPLLVMIEDTTGSGKTEAALVLARRMMQQAKGAGIFIALPTTATADAMYSRMAEQYRRLFATGALPSLALAHGRRRLNPLFCDSILPDGDVAEIHDEESVGVICAAFFADDRRKVFLAEVGVGTVDQALLAVLPSRYATLRLAGIASKILIIDEAHAYDAYMQKEVETLLAFHAAAGGSAIVLSATLPRGMKEKYARAFRNLGHDDTVSLDTLSYPLFTTVSANREPVSNPVAPHVGTSRSVKATRLENRDEALSRIAAATRAGACAVYIRNSVDDAIEAWQGLKDEGLEPLLFHARFVMADRLAVEREVLRVFGKHSTRDQRRGRILVATQVVEQSLDLDFDVMASDLAPIDLLIQRAGRLWRHSRGDRPVPGPELLVVSPEPLIDIHKTWAAAAFPRGAYVYRNHAVLWKSAKVLFEAGTIRSPDNLRDLIESVYGAFDVEIPAALTDNADFSEGRESAETSQAKQNVLPLEDGYAGSRNAAWNSDIAIPTRLGEPQTLFRLAHWQDGALIPYATAGASGNSMLAWALSEMSIARRRATGRGAVPTSVEQAALAIERLWREQGDAAVVLPIIDSRLSLLDDRNQTRGASYASQCGLAWEGPG
>NZ_CP049258.1|WP_165174218.1|4645490_4645790_-|alkylphosphonate-utilization-protein
MADDDYVYDDETGEWITAAEAAAKRAPDTVEVRDAVGNLLADGDSVVLTKDLKVKGAGQTLRRGTVIKSIRLTGDAQEIDCRHESIKGLVLRAEFVRKR
>NZ_CP049258.1|WP_165169660.1|4644013_4645411_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MAKAWTPGSWRNLPVMQLPAYDDAAKLADVEKQLAGYPPLVFAGEARKLKRKLAKVSEGKGFLLQGGDCAESFAEHSADNIRDFFRVFLQMAVVLTFAGSQPVVKVGRIAGQFAKPRSSPTETVNGEELPIYRGDIVNDYAATAAARRPDPERQIMAYRQSAATLNLLRAFAQGGYANLEHVHKWTLGFLKDGPAWERYQALADRITEALGFMRACGVNPDTAPQLRSTEFFTSHEALLLGYEQALTRVDSTSGDWYATSGHMMWIGDRTRQPDHAHVEFCRGVKNPIGLKCGPSLSPAELIRLIDILNPDNEPGRMTLITRFGADKVDKHLPELIRAVKREGRIVVWSCDPMHGNTIKSRSGYKTRPFDQVLAELRRFMAVHQAEGTHAGGIHVEMTGKDVTECTGGVRALSDEDLNDRYHTFCDPRLNAAQALELSFLVAEELKKEQALRPHTDDDESAEAAE
>NZ_CP049258.1|WP_165169659.1|4643538_4643802_-|hypothetical-protein
MQEIFVQSQWDTLLAFLKEGRPPTWLLLALVNGGILAIWLYSRFKGRNRLNPVTVNLMRFLFIALNTAAIFREETLRLARPFLKYFI
>NZ_CP049258.1|WP_165169658.1|4643324_4643546_+|DUF2093-domain-containing-protein
MNRHEPFLPRGREAKIRYLDADFQVLSEGDHVLCAVTGLPIKIEQLTYWSVARQEAYSSAEAAFRRLLETDLK
>NZ_CP049258.1|WP_165169667.1|4657000_4657879_-|DMT-family-transporter
MNGGDGQRYLGWILVSLSAVAWSTAGFFTRLIGEDVWTMLFWRGFFGGCAFAVMVAVHHRGKSLEAYWKLGPMGLLLAVICGLGMITFIGSLMLTTVADVYVIYATVPFITAGVAWLILKERASWSVLAASALALAGVVVMLTGAVYGGILFGQFVALLMTLSMALMAVILRWKRDIAILPVLGLSSWTAAFVAFWFCDPLDVSSFDLIMLALFGVTQSALGLLLFSLGSRMIPAAEATLLTALDVPLAPLWVWLAFGEVPSVYTLAGGLIVLTAVAGHIWFEMRKPQAMPA
>NZ_CP049258.1|WP_165169668.1|4657942_4658830_-|DMT-family-transporter
MNADASSQHRLGLLLVATAALFWSTSGIFVRLIGADLMTMLFWRGVFSGSAVMLVYLLMEGKAGLLRLRNLPLPVFAVAALSAMGMITGIGSMRYTTVAEALIIYATVPFVTAGFAWAFIGEKPSTRTMAASLVALCGVAFMLKDASLDGSLFGKGLAVLMTLSMAGMTTIMRRHQDVPMLPAMALSAWLCSFVTFWFAAPLSVSTQDFLLIALFGIVQNASGLVLYAIWSRKIPAAEATLIAALEVPFTPLWVWLFLGETPAGAVLIGGAIVMLALFGHILTEIRPRRALPPPV
>NZ_CP049258.1|WP_165174219.1|4658826_4659648_-|DMT-family-transporter
MAGWLLCTLALTVSGRELGHDVPVFVIMVLRSLVAMAVLTPLVIYEGNIAARLTQLPLHVVRNIIHYGAQYSWFTALTLIPLAQVVSIEFTMPIWGALIAVTFLGERLTRYRITAIVLGFLGILLIVRPGTAEVDAGHVVALVAALGFAVSVALTKVLTRKDSALTVIFLMFAIQTVIGAVPAWLTWKWPEPGNWIWVAVVGLAGTFSHYCLSKAVSLADMTVVTPMDFLRVPLTVLAGYWLYSEGFDLVSILGAVLILGANLLNLLKAKPAL
>NZ_CP049258.1|WP_165169669.1|4659967_4660981_+|ATP-binding-cassette-domain-containing-protein
MNDAMRMNNSSSVEGRPEPAIAVRGLVKHFGDVRAVDGIDLEVPRGMIFAILGPNGAGKTTLMRMLATLASPDTGTASVMGHDLIAAPQKVRASIAMTGQFASLDEDLTGRENLLMLARLWGYRGRNAKERADELLAAFDLAEAAHKQVKAYSGGMRRKLDIAASLIVTPGVLFLDEPTTGLDPNARQGVWRMIRALAGSGVTILLTTQYLEEADQLAARIAVIDKGKKIAEGTSRELKAATGSGFLHVALVDPARLDDARALLETHLGTQVQRNPEGAQLSVMAGTPEAASQAIAALIAARIELADFSMGSPSLEEVFFALTDGSGRLGKTEGSDQ
>NZ_CP049258.1|WP_165169670.1|4660977_4661796_+|ABC-transporter-permease
MTDVSSSLPALRLDRPPPRPPSAFSNALVFGWRAILKFKHVPEQLFDLVMTPIMFTLLFTFVFGGALAGSTGAYLQFFLPGILVQTIVFNAVYSGMGLSTDLSKGLFDRFRSLPIWSLAPFAGLMVGDILRHLIAGGLILIIGLILGYRAEGGVLGVIAAFALLIAVGFGMGWIFIVLGLLVRTPMTVMTVGFTFLFPLVFASNIMVQPATMPGWLRAFVEVNPVSLMTTAIRGLMAGQASLHEVLLALAGPAALTLLLAPVTLWLYRRRDR
>NZ_CP049258.1|WP_165169671.1|4661810_4663604_-|hypothetical-protein
MTEQIFLSYSHKDTESRKGQPARDWPEIFKNLLGGFFNAQLSVWSDRDIIASTKWQESINRAIIKSSIALLLVGRNFLTSDFIAKKEFPAILRRHTAGGLNIVWVPIDKISADERRRIPVLNSLQAAGGAKKPLRQLSDQELDEALGVIRETLAKIIDLQRDTSDSFRAVLKSRVAESVSSLGISLGPDFAAGDYSIFYKANQYDRILAVKALVPAPGRESIAKDFVNRARVVEKINDPSAISIRNIVPENDPVVPWVVMDFIEDTTLAELLKSGQRLPEKMVAKVIAQLAGVAAQLHADSQHIMGPVQPSNVHFDGDRACVSLLSIANEALESCRVSPTKLFSVNELPYLSPERYYGEPIDGRADQYHLGLLALEVLTGTHPISIKAFSDLKNSVAFFESPRSSFPAELRHKEPALSFIIARMLARDPARRWASINDLIKALTQVAEGEVPDEIIRYVRDRFRAKLSKDPAFFRSFYQKLFERADIKKLFEDRGVNEERQAENLRKTILSILNPTVGITFAAQIEKHSEFEIKDEYYGMFRDAFLVALLDADKDLDEEAREESQDAWRAVLDPALGYMREQIAIMRSAAPSPNALT
>NZ_CP049258.1|WP_165169672.1|4663891_4665220_+|cysteine--tRNA-ligase
MTLRLYNTLTRAKDVFAPIDPQAVRLYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHLYGPEHVVYVRNITDIDDKINARAKEEGVAIGDLTGRTTAQFHADIQALNVLQPTFEPRATGSIPEIIALIEMLIAKGHAYAAEGHVLFDVPSMKDYGRLSRRPLDDMIAGARVDVAPYKRGEMDFVLWKPSSPDLPGWDSPWGRGRPGWHIECSAMSWKHLGETFDIHGGGIDLIFPHHENEVAQSRCAFGLPVMANVWMHNGFLQIDGQKMSKSLGNFVTINEVLKDWPGEVVRFNMLRTHYRQPIDWTVKGLEESTRILDGFYNSAAARLTEEERIAAPVLEALCDDLNTPRAIAELHALDRPNFQVELGATLNELGFTGKHVEEKAAKIDEHKVNELIKARLAARAAKNWAESDRLRGEIDALGVVVKDNKDGTTSWEVKP
>NZ_CP049258.1|WP_165169673.1|4665216_4666815_+|citramalate-synthase
MTRERLYLFDTTLRDGQQTPGVDFSLDDKLVVMEMLDELGLDYIEGGYPGANPTDTALFGAPRGTKATFTAFGMVKRAGRSASNDPGLQDILRAEAKAICFVAKSWDYHVRVALQTTNEENLLTIRESIENARALGREVLLDCEHFFDGFKANPAYALEVAKTAYAAGARWVVLCDTNGGTLPQEISEIVRAVTKTVPGSHLGIHAHNDTEQAVANSLAAVLAGARQIQGTLNGIGERCGNANLVSIIPTLVLKPEYAARFETGVTEQKLATLTHVSRAFDELLNRSPNAQAPYVGRSAFATKAGIHASAIVKEPETYEHVPPESIGNRRRMLVSDQAGKSNLLSELARIGLSVDKTDTRLDALLREVKERESQGYAYDGADASFELLARRMLGTVPEYFDVQSFRVIVEQRHNASGELVTMSEAVVKVKVDDEVFLNAGEGNGPVNALDVALRKDLGKFQRFIDDLELADYKVRILNGGTGATTRVLVESRDGKGNRWFTVGVSPNIVDASFQALSDSIVFKLLREEVAAA
>NZ_CP049258.1|WP_165169674.1|4666846_4668628_-|adenylate/guanylate-cyclase-domain-containing-protein
MAEQRKLAAILAADVVGFSRLTGADEEGTLARLRALRSDVIDPTITVYNGRVVKRTGDGALVEFRSVVDAVRCAIEVQNAMLERNAGLPPERRIEFRIGIHLGDVVEESDGDLMGDGVNIAARLEGVAQPGAICLSDDAYRQVRSRLDLVITDLGETKLKNIAEPMRIYALQAGNAAQARPRLAARADQSARLALPDKPSIAVLPFTNMSGDPDQEYFVDGISEDLITALSRIRWFFVIARNSCFAYKGQSPDVREVARVLGVAYVLEGSVRKVGNRVRVTAQLIDGLSGKHVWAQRYDRDLEDIFAVQDEITATLVGAIEPELGKAERERARANRPDDLHAWDLYRRGLWHTYKRTREDLAEAHQLFRQAIAIDPRMARAYAATEEAFFFQFVGGYVDTGAAAKADALRFAEKAVELDGQDAFNHYALGRALTLVRRHDSAVFELRKAVELNPSFAQAHYALGMTLATGGQPEASLPHIDLAMRLSPQDPYFGQFLVRKAEACLFLGRLQEAIEAAERSLREPNIQWSRWAILAAAHAHLGRMEDAKRSVEGLHAFRPDIDLAFIRDYWPIADAAALNCLVEGLRKAGLSEA
>NZ_CP049258.1|WP_165169675.1|4668847_4670716_-|tetratricopeptide-repeat-protein
MGARQVERRLAAILAADVVGYSRLMGANEVGTLEALKAHRSELLDRKIADYQGRIAKLTGDGMLVEFPSVVNAVECALEIQREMRIRNSDVPQDRRIEFRIGINLSDIIIEDNDLYGEGVNIAARIEAIARPGGISVSAVVRENVGNRLELTFEDTGEHVLKNIERPVRVFDVYPGSPLPGSAAVTPASVKPAVTDRPSIAVLPFANVSGDPEQEYFSDGITDDIITDLSQISGLFVVSRNSSFLYKGKAVNMQQAATELGVKFLLEGSVCKAGQRVRITSQLIDGASGGHLWAARYDRDLTDIFAVQDEITHMIVDQLKIRLLVEERTAIARTPTANVHAYTDYLRGRQLLKMRTRSSLTLGRSLFARAAELDPLYARAYAGMANCESYLKSSEGVAVAVETILATAGKALSIDPGLAEAHAARGMALNIAGRSAEATSAFETALSLDPNNYEANLFYGEFCLNQGDFDLAARHFVRALEVEPDDYRSPLLLTAALRSLGRYDEVEGYARLGWKRAEEAHRLHPDISDPIQLGACALAVLGERDRAKEWVARALAIDPEDSNARYNAAVVYSVLGELDRAIDLLEILFQGQTDSKIWVAHDSYFDPIRSHPRYKKLIGSVE

Crispr_ID: NZ_CP049258_6

• CRISPR_ID: NZ_CP049258_6
• CRISPR_location: 4945455-4946338
• CRISPR_type: TypeIV-A
• Repeat_type: NA
• Spacer_info: 13 spacers
• Cas_protein_info: csf2gr7,cas6e,DinG

Consensus repeat of NZ_CP049258_6

Consensus_repeat	Method
CCCCCTCGATTTGAAGGGGGACNTGAAAG	CRT
CCCTCGATTTGAAGGGGGACTGAAAG	CRISPRCasFinder
CCCCCTCGATTTGAAGGGGGACTGAAAG	PILER-CR

spacers of NZ_CP049258_6

>6.1|4945483|38|NZ_CP049258|CRT
ACCACTCCCGCCACATCCGCAGGGGCGGGGCATACAGA
>6.2|4945549|38|NZ_CP049258|CRT
GTGACGCGGCTCAGATCCATCAGCGCCCATGGTACAGC
>6.3|4945615|37|NZ_CP049258|CRT,PILER-CR
CCCTCAATGGAGAGAGAGAATGAGCGAGCGTTGCAGC
>6.4|4945680|39|NZ_CP049258|CRT,PILER-CR
GTGACGAACGTCCGCAACACCAAGTCAATCCGTTACAGC
>6.5|4945747|39|NZ_CP049258|CRT,PILER-CR
TGCGTCAACCGCACGTCGCGGCCGAATATCGTTGCAGCC
>6.6|4945814|37|NZ_CP049258|CRT,PILER-CR
CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAG
>6.7|4945879|37|NZ_CP049258|CRT,PILER-CR
CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAG
>6.8|4945944|38|NZ_CP049258|CRT
GGGAGAACGGCAGAGAGGCAGGCGCGGGCGGTTGTAGA
>6.9|4946010|38|NZ_CP049258|CRT
CTCAAACACGATCAAGGAGACGTGAGATGAGTTGCAGA
>6.10|4946076|38|NZ_CP049258|CRT
TCGGGGAACGTATTGTTCGCCTTGATCACAGTTGCAGG
>6.11|4946142|38|NZ_CP049258|CRT
GGAATGAGGTTGGCGAATAGCTGGGCCCCGGTTGCAGA
>6.12|4946208|37|NZ_CP049258|CRT
TAATCGTACCAGCCGATGAGTTCATCGTTGGGTATGG
>6.13|4946273|38|NZ_CP049258|CRT
TCCCCGCAATCTCAAGGAGAATAGAGCATTGGAGCAAA
>6.14|4945482|41|NZ_CP049258|CRISPRCasFinder
GACCACTCCCGCCACATCCGCAGGGGCGGGGCATACAGACC
>6.15|4945549|40|NZ_CP049258|CRISPRCasFinder
GTGACGCGGCTCAGATCCATCAGCGCCCATGGTACAGCCC
>6.16|4945615|39|NZ_CP049258|CRISPRCasFinder
CCCTCAATGGAGAGAGAGAATGAGCGAGCGTTGCAGCCC
>6.17|4945680|41|NZ_CP049258|CRISPRCasFinder
GTGACGAACGTCCGCAACACCAAGTCAATCCGTTACAGCCC
>6.18|4945747|41|NZ_CP049258|CRISPRCasFinder
TGCGTCAACCGCACGTCGCGGCCGAATATCGTTGCAGCCTT
>6.19|4945814|39|NZ_CP049258|CRISPRCasFinder
CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAGCC
>6.20|4945879|39|NZ_CP049258|CRISPRCasFinder
CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAGCC
>6.21|4945944|40|NZ_CP049258|CRISPRCasFinder
GGGAGAACGGCAGAGAGGCAGGCGCGGGCGGTTGTAGACC
>6.22|4946010|40|NZ_CP049258|CRISPRCasFinder
CTCAAACACGATCAAGGAGACGTGAGATGAGTTGCAGACC
>6.23|4946076|40|NZ_CP049258|CRISPRCasFinder
TCGGGGAACGTATTGTTCGCCTTGATCACAGTTGCAGGCC
>6.24|4946142|40|NZ_CP049258|CRISPRCasFinder
GGAATGAGGTTGGCGAATAGCTGGGCCCCGGTTGCAGACC
>6.25|4946208|39|NZ_CP049258|CRISPRCasFinder
TAATCGTACCAGCCGATGAGTTCATCGTTGGGTATGGCC
>6.26|4946273|40|NZ_CP049258|CRISPRCasFinder
TCCCCGCAATCTCAAGGAGAATAGAGCATTGGAGCAAACC

CRISPR arrays and Neighbor proteins around NZ_CP049258_6

CRISPR arrays

The CRISPR arrays of NZ_CP049258_6

>merge|NZ_CP049258|6|4945455-4946338|CRT,CRISPRCasFinder,PILER-CR
CCCCTCGATTTGAAGGGGGGACTGAAAGACCACTCCCGCCACATCCGCAGGGGCGGGGCATACAGACCCCATCGAATTGAAAGGGGACTGAAAGGTGACGCGGCTCAGATCCATCAGCGCCCATGGTACAGCCCCCCTCGATCTGAAGGGGGACTGAAAGCCCTCAATGGAGAGAGAGAATGAGCGAGCGTTGCAGCCCCACTCGATTTGAAGGGGGACTGAAAGGTGACGAACGTCCGCAACACCAAGTCAATCCGTTACAGCCCCCCTCGATTTGAAGGGGGACTGAAAGTGCGTCAACCGCACGTCGCGGCCGAATATCGTTGCAGCCTTCCCTCGATTTGAAGGGGGACTGAAAGCCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAGCCCCCTCGATTTGAAGGGGGACTGAAAGCCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAGCCCCCTCGATTTGAAGGGGGACTGAAAGGGGAGAACGGCAGAGAGGCAGGCGCGGGCGGTTGTAGACCCCCTCGATTTGAAGGGGGACTGAAAGCTCAAACACGATCAAGGAGACGTGAGATGAGTTGCAGACCCCCTCGATTTGCAGGGGGGCTGAAAGTCGGGGAACGTATTGTTCGCCTTGATCACAGTTGCAGGCCCCCTAGATTTGTAGGGGGATTGAAAGGGAATGAGGTTGGCGAATAGCTGGGCCCCGGTTGCAGACCCCCTCGATTTGAAGGAGGACTGAAAGTAATCGTACCAGCCGATGAGTTCATCGTTGGGTATGGCCCCCTCGATATGTAGGGGGACTGAAAGTCCCCGCAATCTCAAGGAGAATAGAGCATTGGAGCAAACCTCCTCGATTTGAAGGGGGACTGAAAG

>NZ_CP049258|6|3|4945455-4946338|CRT
CCCCTCGATTTGAAGGGGGGACTGAAAG	ACCACTCCCGCCACATCCGCAGGGGCGGGGCATACAGA
CCCCATCGAATTGAAAGGGGACTGAAAG	GTGACGCGGCTCAGATCCATCAGCGCCCATGGTACAGC
CCCCCTCGATCTGAAGGGGGACTGAAAG	CCCTCAATGGAGAGAGAGAATGAGCGAGCGTTGCAGC
CCCACTCGATTTGAAGGGGGACTGAAAG	GTGACGAACGTCCGCAACACCAAGTCAATCCGTTACAGC
CCCCCTCGATTTGAAGGGGGACTGAAAG	TGCGTCAACCGCACGTCGCGGCCGAATATCGTTGCAGCC
TTCCCTCGATTTGAAGGGGGACTGAAAG	CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAG
CCCCCTCGATTTGAAGGGGGACTGAAAG	CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAG
CCCCCTCGATTTGAAGGGGGACTGAAAG	GGGAGAACGGCAGAGAGGCAGGCGCGGGCGGTTGTAGA
CCCCCTCGATTTGAAGGGGGACTGAAAG	CTCAAACACGATCAAGGAGACGTGAGATGAGTTGCAGA
CCCCCTCGATTTGCAGGGGGGCTGAAAG	TCGGGGAACGTATTGTTCGCCTTGATCACAGTTGCAGG
CCCCCTAGATTTGTAGGGGGATTGAAAG	GGAATGAGGTTGGCGAATAGCTGGGCCCCGGTTGCAGA
CCCCCTCGATTTGAAGGAGGACTGAAAG	TAATCGTACCAGCCGATGAGTTCATCGTTGGGTATGG
CCCCCTCGATATGTAGGGGGACTGAAAG	TCCCCGCAATCTCAAGGAGAATAGAGCATTGGAGCAAA
CCTCCTCGATTTGAAGGGGGACTGAAAG

>NZ_CP049258|6|6|4945456-4946338|CRISPRCasFinder
CCCTCGATTTGAAGGGGGGACTGAAA	GACCACTCCCGCCACATCCGCAGGGGCGGGGCATACAGACC
CCATCGAATTGAAAGGGGACTGAAAG	GTGACGCGGCTCAGATCCATCAGCGCCCATGGTACAGCCC
CCCTCGATCTGAAGGGGGACTGAAAG	CCCTCAATGGAGAGAGAGAATGAGCGAGCGTTGCAGCCC
CACTCGATTTGAAGGGGGACTGAAAG	GTGACGAACGTCCGCAACACCAAGTCAATCCGTTACAGCCC
CCCTCGATTTGAAGGGGGACTGAAAG	TGCGTCAACCGCACGTCGCGGCCGAATATCGTTGCAGCCTT
CCCTCGATTTGAAGGGGGACTGAAAG	CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAGCC
CCCTCGATTTGAAGGGGGACTGAAAG	CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAGCC
CCCTCGATTTGAAGGGGGACTGAAAG	GGGAGAACGGCAGAGAGGCAGGCGCGGGCGGTTGTAGACC
CCCTCGATTTGAAGGGGGACTGAAAG	CTCAAACACGATCAAGGAGACGTGAGATGAGTTGCAGACC
CCCTCGATTTGCAGGGGGGCTGAAAG	TCGGGGAACGTATTGTTCGCCTTGATCACAGTTGCAGGCC
CCCTAGATTTGTAGGGGGATTGAAAG	GGAATGAGGTTGGCGAATAGCTGGGCCCCGGTTGCAGACC
CCCTCGATTTGAAGGAGGACTGAAAG	TAATCGTACCAGCCGATGAGTTCATCGTTGGGTATGGCC
CCCTCGATATGTAGGGGGACTGAAAG	TCCCCGCAATCTCAAGGAGAATAGAGCATTGGAGCAAACC
TCCTCGATTTGAAGGGGGACTGAAAG

>NZ_CP049258|6|5|4945587-4945943|PILER-CR
CCCCCTCGATCTGAAGGGGGACTGAAAG	CCCTCAATGGAGAGAGAGAATGAGCGAGCGTTGCAGC
CCCACTCGATTTGAAGGGGGACTGAAAG	GTGACGAACGTCCGCAACACCAAGTCAATCCGTTACAGC
CCCCCTCGATTTGAAGGGGGACTGAAAG	TGCGTCAACCGCACGTCGCGGCCGAATATCGTTGCAGCC
TTCCCTCGATTTGAAGGGGGACTGAAAG	CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAG
CCCCCTCGATTTGAAGGGGGACTGAAAG	CCGGCGAACGGCACAACCGTCGAACCGTGGGTTGCAG
CCCCCTCGATTTGAAGGGGGACTGAAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049258.1|WP_165169899.1|4941091_4941769_+|AIM24-family-protein	unknown	unknown	gnl|CDD|376704
NZ_CP049258.1|WP_165169914.1|4957805_4958507_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165169905.1|4946396_4948367_+|hypothetical-protein	DinG	COG1199_DinG_CAS-IV-A	gnl|CDD|224120
NZ_CP049258.1|WP_165169907.1|4949153_4949411_-|DUF1344-domain-containing-protein	unknown	unknown	gnl|CDD|369199
NZ_CP049258.1|WP_165169898.1|4940014_4940995_+|TAXI-family-TRAP-transporter-solute-binding-subunit	unknown	unknown	gnl|CDD|270286
NZ_CP049258.1|WP_165169906.1|4948695_4948977_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165169897.1|4939193_4940018_+|DUF4239-domain-containing-protein	unknown	unknown	gnl|CDD|372881
NZ_CP049258.1|WP_165169911.1|4952283_4953081_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379352
NZ_CP049258.1|WP_165169909.1|4951781_4952021_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165169902.1|4943089_4943665_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165169910.1|4952098_4952284_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165169913.1|4954491_4957413_-|hypothetical-protein	unknown	unknown	gnl|CDD|293737
NZ_CP049258.1|WP_165169895.1|4938364_4938601_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165169901.1|4942379_4943081_+|hypothetical-protein	unknown	unknown	gnl|CDD|187838
NZ_CP049258.1|WP_165169900.1|4941862_4942159_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165169903.1|4943717_4944257_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl|CDD|187858
NZ_CP049258.1|WP_165169904.1|4944273_4945383_+|hypothetical-protein	csf2gr7	cd09706_csf2gr7_CAS-IV-A	gnl|CDD|187837
NZ_CP049258.1|WP_165169896.1|4938614_4939136_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165169912.1|4953077_4953962_+|hypothetical-protein	unknown	unknown	gnl|CDD|173502
NZ_CP049258.1|WP_165169908.1|4950239_4951418_+|site-specific-integrase	unknown	unknown	gnl|CDD|271177

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP049258.1|WP_165169903.1|4943717_4944257_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	7.9e-25	82.9	0.1
NZ_CP049258.1|WP_165169905.1|4946396_4948367_+|hypothetical-protein	DinG	COG1199_DinG_CAS-IV-A	4.4e-35	115.7	2.9
NZ_CP049258.1|WP_165169904.1|4944273_4945383_+|hypothetical-protein	csf2gr7	cd09706_csf2gr7_CAS-IV-A	1.7e-13	45.3	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP049258.1|WP_165169899.1|4941091_4941769_+|AIM24-family-protein	gnl|CDD|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	1.11089e-34
NZ_CP049258.1|WP_165169905.1|4946396_4948367_+|hypothetical-protein	gnl|CDD|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	2.45429e-30
NZ_CP049258.1|WP_165169907.1|4949153_4949411_-|DUF1344-domain-containing-protein	gnl|CDD|369199	pfam07076, DUF1344, Protein of unknown function (DUF1344). This family consists of several short, hypothetical bacterial proteins of around 80 residues in length. Members of this family are found in Rhizobium, Agrobacterium and Brucella species. The function of this family is unknown.	9.57913e-11
NZ_CP049258.1|WP_165169898.1|4940014_4940995_+|TAXI-family-TRAP-transporter-solute-binding-subunit	gnl|CDD|270286	cd13568, PBP2_TAXI_TRAP_like_3, Substrate binding domain of putative TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This subgroup includes uncharacterized periplasmic binding proteins that are related to Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family. TRAP transporters are comprised of an SBP (substrate-binding protein) and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function.	9.44495e-105
NZ_CP049258.1|WP_165169911.1|4952283_4953081_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379352	pfam13730, HTH_36, Helix-turn-helix domain.	3.13917e-07
NZ_CP049258.1|WP_165169897.1|4939193_4940018_+|DUF4239-domain-containing-protein	gnl|CDD|372881	pfam14023, DUF4239, Protein of unknown function (DUF4239). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 254 and 270 amino acids in length.	1.16747e-06
NZ_CP049258.1|WP_165169904.1|4944273_4945383_+|hypothetical-protein	gnl|CDD|187837	cd09706, Csf2_U, CRISPR/Cas system-associated RAMP superfamily protein Csf2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Contains several motifs similar to Cas7 family.	5.20414e-10
NZ_CP049258.1|WP_165169913.1|4954491_4957413_-|hypothetical-protein	gnl|CDD|293737	cd16013, AcpA, acid phosphatase A. Acid phosphatase A catalyzes the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at low pH. AcpA hydrolyzes a variety of substrates, including p-nitrophenylphosphate (pNPP), p-nitrophenylphosphorylcholine (pNPPC), peptides containing phosphotyrosine, inositol phosphates, AMP, ATP, fructose 1,6-bisphosphate, glucose and fructose 6-phosphates, NADP, and ribose 5-phosphate. AcpA is distinct from histidine ACPs and purple ACPs, as well as class A, B, and C bacterial nonspecific ACPs.	9.86836e-62
NZ_CP049258.1|WP_165169901.1|4942379_4943081_+|hypothetical-protein	gnl|CDD|187838	cd09707, Csf3_U, CRISPR/Cas system-associated RAMP superfamily protein Csf3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	0.000119801
NZ_CP049258.1|WP_165169903.1|4943717_4944257_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	2.20051e-20
NZ_CP049258.1|WP_165169912.1|4953077_4953962_+|hypothetical-protein	gnl|CDD|173502	PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional.	0.00276794
NZ_CP049258.1|WP_165169908.1|4950239_4951418_+|site-specific-integrase	gnl|CDD|271177	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain. Rci protein is a tyrosine recombinase specifically involved in Shufflon type of DNA rearrangement in bacteria. The shufflon of plasmid R64 consists of four invertible DNA segments which are separated and flanked by seven 19-bp repeat sequences. RCI recombinase facilitates the site-specific recombination between any inverted repeats results in an inversion of the DNA segment(s) either independently or in groups. HP1 integrase promotes site-specific recombination of the HP1 genome into that of Haemophilus influenza. Bacteriophage Hp1_like integrases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.83082e-31

Protein sequences

>NZ_CP049258.1|WP_165169904.1|4944273_4945383_+|hypothetical-protein
MNYSITGQGYITAETPVAVSPPDHYSEARRLLQLPRETVYRDGSPQKFPIIPASTFRGALRHAVTGHTFEALNEVAQKKLFKVNDYIWTAQGGVTDRREEGVESFVEISIPARVRAENPIMGLWGNFTFKMGSLIEMRSARAVDGEAAIVLIPAQVRTDPLERDYGLLGIFDKTDLGAFKDEIIARRQMVKAEKRAEQLEHRLQQVADGKREMTPEQVKALKAEIAQLKDDAEVLAEKAGGAVNLQQITTRYEAIASGGELEHGWALRDVSVDEAAVFLLAWRAWVANGSRVGAIQRSGFGKLKGHYDILIKPSQGANRLDAPVAAGRMKFSYEAGVQIETGDDVLQKIVGAEDAMRKEGFANWNLKAS
>NZ_CP049258.1|WP_165169903.1|4943717_4944257_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MRQATFPTLETNTYVLHQQIEKLMGGRGANHYVWSAEPIGNRMTAITIRSAALPPVLEKYGVTLPSTFHVGEVRRFSLVAQCAIRRGEKNNRVAIDVDDDERRHEWLRRRAALNGFEVVSAEIATVERIRIGKTGARHVADRTRFEGTLKITDPEKFANAMRMGIGHGKAFGLGLIDVG
>NZ_CP049258.1|WP_165169902.1|4943089_4943665_+|hypothetical-protein
MIDQFAIAFEVARHWLPEDEQGSDNRANVLRALSRPQVTDPEKAARRLTVGWFIATPDGGYHNLGAEPLRSLSNRVVRGTSIEETIGDQPIERPTVVVRLAKAGLSIRNFQPSYGDTLRINEAGKPTSNIDLANVRDLTRLTWRVKPGAKWVYQTRRALVEAKFGNPAGLQTLPSHPSTMTLLICSRPSTG
>NZ_CP049258.1|WP_165169901.1|4942379_4943081_+|hypothetical-protein
MTATPIVIRFVMASPVILSDGASLDAVATFQGFARGEDGVQLLNQLFVRNGSVHCASWLFPETEYIVDRAEFVRLQRTGTALNTRTLLPPRGQTDAFRVDNKRGIAANKRTTMTTIATPAIWAFATGDLSAIAKMLSDVSSIGIKRANGFGRVQRIDISRAEGWPGFGKLMRDGSPARAIPVDECQAVTKRGAYVLGFPRWSAAPEQCAIPTRKTVDPTIFAELVPAAELEFS
>NZ_CP049258.1|WP_165169900.1|4941862_4942159_+|hypothetical-protein
MLDNNTPFWFAGTAISFTRLYCETTVAGLYFFAMKGVKLPIACSVFPDELYEAPKSWAEGLSQSHTLQTSFPRADTSRLGGQPEFMTAEIRTALTFLR
>NZ_CP049258.1|WP_165169899.1|4941091_4941769_+|AIM24-family-protein
MAQFETQEAQFQRWIKITLDDEAVRAEAGALSYMRGEIEIDTPLPSLGQFIKCSLADEPLVRPRYIGTGEVFLTSSFGGYHVIELKDEAWILESGAYWASDNTIELGLYREAMITSFWAGEGFIDFQTKVSGSGRVVLNAPGPVEEISLGNESISVEGKLIIARTAGVGYKVANPARSYFRYWLSREKFVRRYTGPGKVLLVSTPYLNRRLAAGLAPESDTMSVS
>NZ_CP049258.1|WP_165169898.1|4940014_4940995_+|TAXI-family-TRAP-transporter-solute-binding-subunit
MTVGYPNVRKLVAVVIASLTLAGTWIVASAEPAFVSMGTGPVSGIYYPTGRSICDVVNAVAGMTLRCSVEATPGSVYNVEAVASGEIEFALIQSDVQFFSSRGEGHWKNRPVGKLRSVMSLYPELLTIMARPDAGIHDLDGLKGKRVNIGMSGTGTRATWDEIADTFGISAGDLMEAAKLKPAAAIERMCAKTLDANLLIVGHPSKMVESQLATCGLVLAGASEERISKLVSSRPYYVSATIPAAYYGLGSDVRTFGVKATLVSSADVPDDLVYVLVKTIMMNLDNLKAQSPSLAGLKPEEMISQSLTAPLHPGAARAYRELGLLK
>NZ_CP049258.1|WP_165169897.1|4939193_4940018_+|DUF4239-domain-containing-protein
MPRWFDLQWLTAAMDALSTRQLAFFCSAILVGVTWFGIIFFKPFIRRLLRSQPGANDLVNFASAGFSLFYGLLLGLLSFATFGNVSSVEASVDREASNIAALYRLVGSYPEPLQSELQYLLRDYTKYVIDKDWPAHRQGKIYNGGDLRLQVIEEKIISLMPASHAQELLQEQSIKTFGEIRDARFQRLTGVNTAIPGVLWYVVFIGAVINILLIWMLDMRFSLHLVLGGIVSFFLGVMIFLIAAMDRPLQGSVSVSANAYKVMFKHAMQWDDAQ
>NZ_CP049258.1|WP_165169896.1|4938614_4939136_+|hypothetical-protein
MAYTEDDLNLLASVPQLIGSAIAASAGSGLFGTGKELFANANAVLDGLKSYPGNPLIKQLLPDPAGDRAAAVEKMKRTRDWTTARLRAKGVDNGEKLRALVIEDARAAAAVLASKASPSEAAEYKQWALSIAEKVASAATEGGFLGFGGERVSAAEKALIADVRNALGVAATA
>NZ_CP049258.1|WP_165169895.1|4938364_4938601_+|hypothetical-protein
MVHLECDANLEDNYSVMVAVIMDITTAQAPLPKLQEAAAAIGVSGRTARLSTEQLPPIKEAACEVLAIPGVTDVVKPA
>NZ_CP049258.1|WP_165169905.1|4946396_4948367_+|hypothetical-protein
MTSTSRILSRILTPRDQQKRLAEFIDGAASPAIAVQADTGTGKTAVLLSAAIAEAKRGRRAIVSTHTIQLLHQVEREAARFSTEGVSFGTRLGMRNFISVSRANSAFARLLSRDDATAEDEAVFSDLMNFAESRSGLIEDFVAECGDLPAGLKPHEICLLPSARASDRAAWQRATEAVRETEIVIQTHALTLAQARFGQLPPVVIFDEADALSDVADSAEDNRLSLAELQALLKYAGVSTAALDRVTAEPRDFKLREDLAATLKIKHEDEDVRFAMSNAQRILTAHKRDGPRRGTDVIREGNDTIIRALWADRAHWIWRNLTDAGAQRSIFASATLAVGDQVGLSLRRYGVPLASTEAASFSPRNFGTMDFRVIPETTPAPVQDRTVNDAWREEASLWLTREGLMRKDSRPLVLAQSYADTAYFAERLGIIGHERGQPLARFVERFRSGDIQGLATPAGWAGIDLPGLITDVVVLRLPYGVIDDLKTELTGRTDFPAIKAAMQRKLKQGLGRGIRKEDDQVTVWLADPRVHDLRNGILAAIPERFRNAFLVSLNQVRMRLAAVRTEQERFRDALLAHHGGRCVVTGSNVEAVLEAAHRPGKSWKAGHNRVEDGLLVRSDIHKLIDDGLLTITDNVVSVDPSVAAEYGQYEGKVIAT
>NZ_CP049258.1|WP_165169906.1|4948695_4948977_+|hypothetical-protein
MIVEVLLMLVENVIGTADGGKARSHGAASGSATREGKPAAAPHRKRAAWFDPGAAAQNSRDLKMDRIYASAAPGSASHSIAQLGAGGSRYRTD
>NZ_CP049258.1|WP_165169907.1|4949153_4949411_-|DUF1344-domain-containing-protein
MKSSILAAGAAFLIVSAGSAFAKDDVGTIKAINKSGDSITLSDGKVFTLPEGIEAETLKVGERVHVVYSTNAAGKVTVSKVIPVK
>NZ_CP049258.1|WP_165169908.1|4950239_4951418_+|site-specific-integrase
MPRLTETRALRAKLPKKGTKFDWCSEVRTFGARYTPGSRTWVVYPRCTNGIRVMIALGAVGVLPFEGPPHRPGARDLAIAAITAARRGEDPRVAIGQANAPEGLTLAEVWQAYADAGFPKLKGTGRKRASTIKRDTDRYNYRIKPMLGGEAVSRIDTARVRRWLDTIEADGQRNHSLVLLKSLLSFAASRNLATTQAIAISAQKSKEMQNFYTTDELVRLDAAMVELMREKPERRMGFAALRLLLLTGARKGQILSLRWSDVDLKHGVLALEKDKTSENRRDILLLPEAVAILKGLPRRSSSFVFPADSKSGHTVNIEKHLNDAVERAGVNLHRIHDLRHSFASAAIRTGTSLYVTGQLLGHKQATTTQRYAHLEHDVAREALERIAKAIGG
>NZ_CP049258.1|WP_165169909.1|4951781_4952021_+|hypothetical-protein
MPPIPAEQVSPFDSENHPNHVTPFPHLTTNELAARWRCTVFTISAKYRSLGLRPIRVGKRLLFPIVQIEAAERRSMGAQ
>NZ_CP049258.1|WP_165169910.1|4952098_4952284_+|hypothetical-protein
MSSDIEELTGLMVREDRATFARWKPIAAAISPHSGLSTYSETETVVVESPVAPANDIGAIP
>NZ_CP049258.1|WP_165169911.1|4952283_4953081_+|helix-turn-helix-domain-containing-protein
MTGDDFTKNKLKWIECIAADAKLSASAVRLGVLLATRFLNRKYGYAFPAQDTLAKILDINDRTIRRVASELVAAGYLISKQGGPGVSNRYRIIFPDRTITSEMPPSPDKNARSDEKLTGQICPTGWAKMPVLTGQKCPTNPMRVPFEEPSGEIAHPRERAADAALAQEFEAFMEAYPSGHGGNRQFAENCFKQKVKDGVDPAHIIAGAKCYRASGEHPIYPVKWLKQEGWLKEYRPAPKRSGGRSARGGDRSWLNAGRSIIGEDR
>NZ_CP049258.1|WP_165169912.1|4953077_4953962_+|hypothetical-protein
MNKIVKSDSANLTVLKGAQDLADFDRFAKETEKLAKVRRKLHQVTEPLREMNSTTDEMERVIKEAKAALERYSCDGTLERVKRLEGQAAKLEPGEYYTEDGEMSASFGMAMLINFLTAFPTSNVPDPPLFLKILSEEVGARAPNWFALNAALLHLRRTSKFVPTLSELLETLDREEKVWSHRLEAHDELGYELSELPTLIEEAEAWVVEKRERMESERLERERLERDRERQRALPITPGDRVEVEYLGPGTVVRPWGDDLMLVAFDRLDYEQCMDISCLKRLLPGDVNFEQVRA
>NZ_CP049258.1|WP_165169913.1|4954491_4957413_-|hypothetical-protein
MAFAYRTHEALIELSPGETGLWRLPPMTPGTIIVQSFYAMPSGWQSSTPATPLEHGSGTPQPGLGGHAGGPGLHTPLGRLEADPGGAGSATPAAGGTIRRAQPRFPTGGLGGDLDLIDDIGGSFGPTMELTLELLRGGQVVPDLNPQSHTILHQTPNAGDIWALRITRNQDGSLERRRYRIHAQYPSVLPILTRTIPMGFFSRGFAKNWDSNPYIAWAYLEGGLLAYKWDEQFALLYDKPLDDQYVPLGTDRLKLPHITLDTISVEAGGEQGPIAGQGQMPYFKLRFDFSYRDSHTAELDIPGPNPSAQLPDPLWVAAKFYLSPYSQGTIGYYVAVESPLLDALDRDVTYPSASQGLETINVKQVVKKAIEDYLYRLQFSAKGNLMDRYLRPWLVGRYEVENIRYDPNADAMVLTYVGRQTPSHELVFSSDTGGTIVQPDMVSDGGGSGGVATAGAPRLFDLPFEEPLPPEGFGVDPTPLHGVSPGALSKIEHIVVLMQENRSFDQVLGYLSRDGMLPRSKLLSADESAEHEREPLQDNVDGLLPGDNARDTIRFPDLPGGHLFRASRTRTTAWPSFGLDNPCHGHACVERQIADGMKGFVADFARKPGNGQAELQLIMNYLTDAELPAYGALTREFAICDRWFCSHIGGTLPNRFISLGGDLSEDIYGSPEAENPDLAKSFAPLEARTFFDHLTARNVSWKLFEHGYSMLRLIRNFTFDETNIASFASPTDGFAAVARAGRLPAVSFIEPDYIEAPDGNDDHAPADMFNGQRLIATIVSALLDSPADANGRTQWDKTLLIITYDEHGGFYDHVPLPYQTTHTAPDGTTTTRDIPPLANGERRLGVRVPAFVISPFIPSMPDGKVNVAKAIYDHTTIPATILRRFCAPFPPNLGARMAGMPDLRDVLTLDSPRPRSDFNTLAAEMAAIANRAPAPVNGQVPPAPLRAPAPDRMEDDFHGLIAYASSVTGMGRP
>NZ_CP049258.1|WP_165169914.1|4957805_4958507_-|hypothetical-protein
MRSEHFLDNVNDAVRDNPVAAGLIGLGLAWMLFSKSRAVVGTTSRAARASRDTLDTAVDVATGAIGSTVVGAVDQIRKATAGVSDAVSDGMKAAASKVGVDMEGSETATTKPDKRNADSGNHSLPFRSGLADLLDRQPLALAAVGVAVGAVIASAFPSTGTEERLMGTAGEKLRETVKGAAEAAGDRVTTAIAEATDEAVAQDLTPDAFKKGARGSAAKLKRVAEAGLKGVVR

Crispr_ID: NZ_CP049258_7

• CRISPR_ID: NZ_CP049258_7
• CRISPR_location: 5998820-5998937
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP049258_7

Consensus_repeat	Method
ACGCATCGGCTTTTCCGAAAAGTCTGGATGGCCGCCTCAAG	CRISPRCasFinder

spacers of NZ_CP049258_7

>7.1|5998861|36|NZ_CP049258|CRISPRCasFinder
CGGCGGCCATGGATTTTTCGGGCCGATGCTTAGCTA

CRISPR arrays and Neighbor proteins around NZ_CP049258_7

CRISPR arrays

The CRISPR arrays of NZ_CP049258_7

>merge|NZ_CP049258|7|5998820-5998937|CRISPRCasFinder
ACGCATCGGCTTTTCCGAAAAGTCTGGATGGCCGCCTCAAGCGGCGGCCATGGATTTTTCGGGCCGATGCTTAGCTAACGCATCGGCTTTTCCGAAAAGTCTGGATGGCCGCCTCAAG

>NZ_CP049258|7|7|5998820-5998937|CRISPRCasFinder
ACGCATCGGCTTTTCCGAAAAGTCTGGATGGCCGCCTCAAG	CGGCGGCCATGGATTTTTCGGGCCGATGCTTAGCTA
ACGCATCGGCTTTTCCGAAAAGTCTGGATGGCCGCCTCAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049258.1|WP_165171602.1|5992152_5992518_+|cupin-domain-containing-protein	unknown	unknown	gnl|CDD|225981
NZ_CP049258.1|WP_165171618.1|6006152_6007562_-|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO	unknown	unknown	gnl|CDD|235416
NZ_CP049258.1|WP_165171599.1|5987968_5989057_+|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270308
NZ_CP049258.1|WP_165171606.1|5996228_5996486_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165171616.1|6004414_6006169_+|DUF4153-domain-containing-protein	unknown	unknown	gnl|CDD|372672
NZ_CP049258.1|WP_165171607.1|5996692_5998045_+|LysM-peptidoglycan-binding-domain-containing-M23-family-metallopeptidase	unknown	unknown	gnl|CDD|223810
NZ_CP049258.1|WP_165171620.1|6009807_6010086_+|acylphosphatase	unknown	unknown	gnl|CDD|224174
NZ_CP049258.1|WP_165171609.1|6000010_6000355_+|preprotein-translocase-subunit-YajC	unknown	unknown	gnl|CDD|235518
NZ_CP049258.1|WP_165171604.1|5994683_5996114_-|homospermidine-synthase	unknown	unknown	gnl|CDD|227626
NZ_CP049258.1|WP_165171611.1|6002124_6003108_+|protein-translocase-subunit-SecF	unknown	unknown	gnl|CDD|237275
NZ_CP049258.1|WP_165171614.1|6003524_6004364_+|phytoene/squalene-synthase-family-protein	unknown	unknown	gnl|CDD|224478
NZ_CP049258.1|WP_165171610.1|6000507_6002112_+|protein-translocase-subunit-SecD	unknown	unknown	gnl|CDD|235615
NZ_CP049258.1|WP_165171622.1|6010138_6010816_-|lipoyl(octanoyl)-transferase-LipB	unknown	unknown	gnl|CDD|237680
NZ_CP049258.1|WP_165171600.1|5989963_5990728_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224098
NZ_CP049258.1|WP_165171612.1|6003141_6003528_+|hypothetical-protein	unknown	unknown	gnl|CDD|226260
NZ_CP049258.1|WP_165174302.1|5989140_5989971_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224097
NZ_CP049258.1|WP_165171601.1|5990761_5992153_+|glycosyltransferase	unknown	unknown	gnl|CDD|224732
NZ_CP049258.1|WP_165174303.1|6007813_6009811_+|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	unknown	unknown	gnl|CDD|227111
NZ_CP049258.1|WP_165171598.1|5986551_5987757_+|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl|CDD|226985
NZ_CP049258.1|WP_165171603.1|5992680_5993046_+|cupin-domain-containing-protein	unknown	unknown	gnl|CDD|225981

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP049258.1|WP_165171602.1|5992152_5992518_+|cupin-domain-containing-protein	gnl|CDD|225981	COG3450, COG3450, Predicted enzyme of the cupin superfamily [General function prediction only].	5.40983e-33
NZ_CP049258.1|WP_165171618.1|6006152_6007562_-|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO	gnl|CDD|235416	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed.	0
NZ_CP049258.1|WP_165171599.1|5987968_5989057_+|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl|CDD|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.83087e-111
NZ_CP049258.1|WP_165171616.1|6004414_6006169_+|DUF4153-domain-containing-protein	gnl|CDD|372672	pfam13687, DUF4153, Domain of unknown function (DUF4153). Members of this family are annotated as putative inner membrane proteins.	8.4303e-39
NZ_CP049258.1|WP_165171607.1|5996692_5998045_+|LysM-peptidoglycan-binding-domain-containing-M23-family-metallopeptidase	gnl|CDD|223810	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane].	3.12704e-39
NZ_CP049258.1|WP_165171620.1|6009807_6010086_+|acylphosphatase	gnl|CDD|224174	COG1254, AcyP, Acylphosphatases [Energy production and conversion].	2.87106e-29
NZ_CP049258.1|WP_165171609.1|6000010_6000355_+|preprotein-translocase-subunit-YajC	gnl|CDD|235518	PRK05585, yajC, preprotein translocase subunit YajC; Validated.	3.66618e-36
NZ_CP049258.1|WP_165171604.1|5994683_5996114_-|homospermidine-synthase	gnl|CDD|227626	COG5310, COG5310, Homospermidine synthase [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP049258.1|WP_165171611.1|6002124_6003108_+|protein-translocase-subunit-SecF	gnl|CDD|237275	PRK13022, secF, protein translocase subunit SecF.	1.30003e-121
NZ_CP049258.1|WP_165171614.1|6003524_6004364_+|phytoene/squalene-synthase-family-protein	gnl|CDD|224478	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism].	4.20971e-50
NZ_CP049258.1|WP_165171598.1|5986551_5987757_+|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl|CDD|226985	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only].	3.28247e-55
NZ_CP049258.1|WP_165171622.1|6010138_6010816_-|lipoyl(octanoyl)-transferase-LipB	gnl|CDD|237680	PRK14341, PRK14341, lipoyl(octanoyl) transferase LipB.	3.07975e-145
NZ_CP049258.1|WP_165171600.1|5989963_5990728_+|ABC-transporter-permease	gnl|CDD|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	2.34783e-78
NZ_CP049258.1|WP_165171612.1|6003141_6003528_+|hypothetical-protein	gnl|CDD|226260	COG3737, COG3737, Uncharacterized conserved protein [Function unknown].	6.97687e-39
NZ_CP049258.1|WP_165174302.1|5989140_5989971_+|ABC-transporter-permease	gnl|CDD|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	9.35942e-95
NZ_CP049258.1|WP_165171601.1|5990761_5992153_+|glycosyltransferase	gnl|CDD|224732	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms].	1.90066e-88
NZ_CP049258.1|WP_165174303.1|6007813_6009811_+|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	gnl|CDD|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP049258.1|WP_165171610.1|6000507_6002112_+|protein-translocase-subunit-SecD	gnl|CDD|235615	PRK05812, secD, preprotein translocase subunit SecD; Reviewed.	0
NZ_CP049258.1|WP_165171603.1|5992680_5993046_+|cupin-domain-containing-protein	gnl|CDD|225981	COG3450, COG3450, Predicted enzyme of the cupin superfamily [General function prediction only].	7.142e-37

Protein sequences

>NZ_CP049258.1|WP_165171607.1|5996692_5998045_+|LysM-peptidoglycan-binding-domain-containing-M23-family-metallopeptidase
MRSSSVRAVGFPSKASLLLSVAAAVLLSACSGSVDRFADSSSSSSSSGDTLYTASVPKSVQGSGGDTDVASASDRDTVSRRPLGSNSSKAAENNYASNGYNYQQTYKPVYKQPNLQPKDYQSAQTEPSYNEQPAVAAKSGSVRVEPGMTLYSIARANNVAVGDLARANNIAAPYSVNVGQNLRIPGRETAMAPQPASAKPGSTLMAGGGEHTVRSGETLYSLGRTYGVHPFAIAKLNGLDNNVSLRQGQIVRIPKGGSAAGSAVAAKQPTAPATSGASSTVAANEPDDQSDTDTAAAAPKPIQQQPQQLVSDNQPAQEAGSLSFRWPVKGRVISNYGSKPGGLRNEGINIAVPEGTDVRSAEAGVVAYAGNELKGYGNLVLIRHEGGWVTAYAHNKDLFVKRGDTVKRGDVIAKAGQTGSVSSPQVHFEVRKGATAMDPMRFLNNSTASN
>NZ_CP049258.1|WP_165171606.1|5996228_5996486_+|hypothetical-protein
MQKTLILLSAAMVLGACAGRYGNDEPSYQYCVRLARQEGQVINYIDTTLQYRKRHYPGEQTEAELKKAHAERRDIHRERRDLGCI
>NZ_CP049258.1|WP_165171604.1|5994683_5996114_-|homospermidine-synthase
MTLWPQHATWNGPIVMIGLGSIGRGTLPLILRHIACDRSKFTIIDPDDHNKHLADKEGIAFIKKALTPKNYKSILTPLLKSDQGQAFIVNLSVDVSSVDIQKLAQATGSLYIDTVVEPWLGFYYNSKLDNAARTNYAMRESMLAIKEKFKGGHTSVSCCGANPGMVSWYVKQALLDIAEATKVKVKEPKTREEWGKLMKRLGVKGIHIAERDTQRAKKPKPLDTFVNTWSVEGFISEGLQPAELGWGTHEKKLPPGGKKHKTGCGAAIYITRPGAETKVRTWTPTPGPQYGFLVTHNEAISIADYFTVREGRKVTYRPTCHYAYHPCNDAVLSMHEMFGNAGKKQSHIHILEEDEILDGRDELGVLIYGHKKNAYWYGSQLTIEEARKLAPYQNATGLQVTSAVLAGMVWAIENPKAGVVETDEMDFRRCLEVQMPYLGQMTGVYTDWNPLTDRQTLFAEEIDKRDPWQFSNILVK
>NZ_CP049258.1|WP_165171603.1|5992680_5993046_+|cupin-domain-containing-protein
MPTNLNSSAPHIVDPANYPGPFKDWGVIPTMIEGESRTSGIVLHKGPEGQSETGIWICTPGYWNCYVTKDEFCHFLTGRCTYTHESGDVIEIGPDTTAFFPQDWKGTCRVHETIRKVYMIR
>NZ_CP049258.1|WP_165171602.1|5992152_5992518_+|cupin-domain-containing-protein
MSKGLASTAPHIADPASYAGPLKDWGHQPNPIAGDSKSDGVLLHKGPNGQPEVGLWQCTPGTWPLSIPRDELCYFVSGRATYTHQSGETIEIVPGTAVLFPAGWTGICVVHETMRNVYILR
>NZ_CP049258.1|WP_165171601.1|5990761_5992153_+|glycosyltransferase
MAKKAVKKKAAKKTVKKVAVKKKARKVAKKPKKVIALFPEAAFGPALNSVGIGQALEKLGHKVVFLSDPGFLDVYKGYGFEAHPVNLSEPLPPEEMAKFWVDFINGHIPNFRKSPYDQIDNYVKGCWEMIVETAKWAEKDLPGVLTRVKPDVVCVDNVILFPAIKHYARDNDKPWVRVISCSENEIEDPDIPPHLSGCGEKDKNGFARYRERFNDVIGPIHDNFNQFLKSVGEAEYPLGQFFEASPHMNLLLYPSAVKFKRRHKLSPRQFQYLEGCVRKDAPYKVPKFKKNNDKPLLYVSFGSLGSGDVDLLKRLIVTIGKLPVRALVNVGDYMDQYTDVPPNVHIDKWYPQPSVIPQVDAVIHHGGNNSFTECLYFGKPALIMPYVWDGHDNATRVEETGHGFKLDRYEWTDEVMADRITRMLTDKKMKAKLKKTSSDMRKQKGPAKAAKVIDGLLRRRKAA
>NZ_CP049258.1|WP_165171600.1|5989963_5990728_+|ABC-transporter-permease
MRKAYLALVYVFLYTPIAVLMILSFNKAGMPTAWTGFSTEWYGKLLESPKIIAAARNSLIVAIASTLIATTIGTLLALGVERRKASSGLDALLFMPMIIPDIVLAIALLSFFTLVKFTLGLHSIILAHVVFNIAFVCAVVRARLKSFDWSLTEASRDLGAGALTTFRKITFPLIWPAVIAAALLAFTLSVDEFIIAYFTAGAGQGSTTLPMQIYAMIRFGVTPEINAMATIILLVSFALVLMAQRFNRGAVPGT
>NZ_CP049258.1|WP_165174302.1|5989140_5989971_+|ABC-transporter-permease
MLPGLLWLGILMVVPCAIILVTAFYDRGIYGGVDWSVATLGNFSRAGEWLYLSIFLDSARIAALAAFLALLVGYPAAYAIAKSVPRHQTALLFLAMLPFWTNYLIRTYAWIVLLNPTGLANNFLQWLGLTSAPLPLLYNEFAVIVGLVYNYVPFVILAVYSALQRLDPSYAEASRDLGAGALTTFWRITLPLTAPGVAAGAVFVFVLSIGNFVTPDLLGGGKLQMVGNLIYDQFLTARDWPFGSALSVILIAVMLLLLFAQAVAANRARGEGRGHA
>NZ_CP049258.1|WP_165171599.1|5987968_5989057_+|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MPIRIYREGTKVKALKLMSAACAAGAAMLLAAGLAQAAEKLVISNWDGYMPKDLPEKFKAETGIELEVAVHATNEEIMGKVVASKGEGYDVIFVSSPFAEALNKLGIAAKLDHSKIPNLANLYPEASQLKHDPGNTFSIPYSWGTTGLCYRSDVVKTAPTSWNDLLKPADDLKGKTTMLSTDRWLMAAGELALGMSVNEVDLAKLDQVKALLIDTKKTLLAYDDTTFYSKLVSGEASLVQAWDGWCNYGIAENPKIKYVVPKEGSDLWVDTMVVIEGSKNKDAAYKFLDYILKADTGKWVVENIMYKTPNKAGMDAIDKTMLETYPNMAIPPADLLKYEQLRDLGDGMKTFSKVVTEITSSK
>NZ_CP049258.1|WP_165171598.1|5986551_5987757_+|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MNAIDFGAPNRLADDERAGLPPWTYFNKELFQIEQDELFRRHWQLACHVSDVPQEGDWTTFDIAGERALIVRGKDKVVRAFHNVCRHRGSRVVAGESGRCKSAMVCPFHGWSYNLDGTLRAVPKAKTFPKLDPVTHGLVPLEHEIWQGFVFVRFKPGPQGSVANLMSPHEKEAAAYRLAEARPYSPQTRDILEVNWKAVRDVDNEGYHVPIAHPALHDLYGQQYRDGRPSDGVSRSEGRITGVSPRFWSVRNYVKHRPDMGHLPEEAKGRWVYLGMFPNLVIMLYPDLVGYYQELPVEVGKTIQRMAYYAPPDDRRAAKVARYLAHRIDRVTGAEDAQLIKWSWESMQSSGFSSMILSDLEAGVRDYHDTLRATIPVAALVNEPAKGQVETINQTLLATRN
>NZ_CP049258.1|WP_165171609.1|6000010_6000355_+|preprotein-translocase-subunit-YajC
MFITPAFAQATGSPGTGDFIGMILPLVMIMVVFWFLLIRPQQKRQKEHQQLISKVARGDTIVTSGGLIGRVSKVVDERELLVEVGENVKVRVVRSAISEVRAKGEPIKDDAAKK
>NZ_CP049258.1|WP_165171610.1|6000507_6002112_+|protein-translocase-subunit-SecD
MLNFSRWKIIAILASILAGIIFALPNVLPKDMQDKLREHTILRPITLGLDLQGGSNVLMEVDRKELTNTLIVQQMGDVRAALREARIGYKLNRTPSGVTVQINNADDADKAYGVLRNLTQPIDTGMFGTGVASHIFSLSRSGQQFTFAFNDAGLESRVSQAVEQSLRIIENRVNGTGIAEASIQRQGRDRIVIQLPGVGDPDQVVKMIGQTAKLTFQLVCESQPVNPTDNPPPECAAYPMKENPQQNMWVQTSSAATVDGADLSNASSGFDSRTNEPIVSFKFNQKGALRFGKLTTDNVGKPFAIILDQEVISAPRINEPILGGTGQISGNFTVQEANSLAIVLKSGALPARLVAVEQRTVGPSLGSDSIRAGAIASIIALVAVMTFMLIAYGLFGIFANIALIVNLILLIGIMSVAGFTLTLPGIAGIVLTMGIAVDSNVLVYERIREEWRHGRTAFNSIETGFKAALATVLDLNITSFIAAVVLFGVGSGPVKGFAIAHAIGIITTVFTAFTVTRLIVFWWVRTTKPKEVPL
>NZ_CP049258.1|WP_165171611.1|6002124_6003108_+|protein-translocase-subunit-SecF
MFKPIRFIPDDTKIRFMLWSRYGYFASGIACLASILLFVFVGLNYGVDFKGGTVFVIRTEQPANLDELRSKVNSLGFGDAELQEFGTGGHEVLIRLPTIEGGEDVQRNVQTKVKEILGAGVEYLSIDVVGPKVSGELAEWSIFAVLIAIIGILIYIWFRFEWQFAIATVMSLLHDVLLSIGFFILIKIEFNLQLIAALLTIVGYSLNDTVVVFDRVREYLRKYKQMPLADLIDFSVNSVLPRTLLTSVTTLLALISLYIFGGEVLKGFTLAMIWGVCVATYSSIFSAASLLALLGVNRDAIQVGGAPEAAKAKTGDKVSRKPAPARP
>NZ_CP049258.1|WP_165171612.1|6003141_6003528_+|hypothetical-protein
MAEDNRFFPHRAPIDSYGNGGFRFGGMSHQGSILILGDGMHAWTATRFADVTVADFAMVLEAQKRPYSFILGTGTAAPAPSRPLIAAFDKAGIGLQIMTTGAAVRTYNILLGENRDIWAGLIAVDTVR
>NZ_CP049258.1|WP_165171614.1|6003524_6004364_+|phytoene/squalene-synthase-family-protein
MSADYCHVLVRQGDKDRYLSTLLAPDAKRAQLLALYAFNIEIARIRETVSEAALGEIRLQWWTDAVEALYAGEKEGHPVIEALAPVITEAGLPKHALINMIEARRFDLYDDPMPSLQQLEGYLGETSSMLIQLSAMILDKNRAQRLGDISGLAGVAMGITGLLRSLPLQRKRGQCYVPAEMLVRHGLTPAHLLSGRDPEAIAKVLAELRAHAQTRLGEARALTGVLTPEVIPAYLPASLTELYLKRLARLGAGALTEIAEIAQWRRQWALYRRARSQTL
>NZ_CP049258.1|WP_165171616.1|6004414_6006169_+|DUF4153-domain-containing-protein
MSLADRLHRLVPDLSASLARFPVPAAVSVLLVVYANLDVAGIASNGTNSDNQVYLGGAAAFIAAGAAHYFAQCRGLSRSAELILALFAALAASALAYWDVYLSSSHLFLFAGLLPLLMIAGFLRSDAKQGALWLFNLRLGLAVLLAAIVGLIFAGGISAILASLEFLFNVDLPWKAHEHVWVTAATLIAPLFELSLMPARLDEEVALTGGRDTLIERGVSVLVNYIMVPIAVIYTLILHAYAVKILIDGALPKGQIALMVSIFAVGGTATWLIAWPWRESGTILLRFFMRYWFWFTIVPVILLTIAIWERISTYGVTPERYGIVVIAVWLAFVMLYLAIRRNRADMRALLGSFAVLVLIGSTGPWGANGLSIESQFGRLVGYFETEKILTPEGKVVDQPLTLSVESKREIDSILWSLNQMGGLDKLRPFFAGRKDDPFIDAATGWDAMTQIRKLLGLDIYTPAADQVSFGADMPFMQDITGQGRLVGPIQVRMKAADTPQAQIWAKTDGQTLEITVGAQKWSIPVKPVMERVKAATTPPVRSSEQQPVIYEAEPGLTLVIINASGEISDKPSYLNLGFWIILRQ
>NZ_CP049258.1|WP_165171618.1|6006152_6007562_-|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO
MTLKPIHIIGGGLAGSEAAWQAAHAGVPVVLHEMRPERMTDAHKTQGLAELVCSNSFRSDDAQSNAVGLLHEEMRRAGSLIMRMGDRHKVPAGGALAVDRDGFSDGVSEALHAHPLITIARGEVAGLPPEDWDNVIVATGPLTSPALAGAIQALTGDQGLAFFDAIAPIVHRDTIDMNVAWFQSRYDKQGPGGTGKDYINCPMTREQYDAFIGALIAGDKTDFKEWEKSTPYFDGCLPIEVMAERGPETLRHGPMKPRGLTNAHQPDTKPYAVVQLRQDNKLGTLYNMVGFQTKLKHGEQLRVFKTIPGLENAEFARLGGLHRNTFLNSPKVLDERLRLRASPRLRFAGQITGVEGYVESAAMGLMAGRMAAAERLGRDFSPPPATTGHGALINHITGGHIETTDNNTGSFQPMNVNFGLFPPVEIPKGPDGKKPRGKDKQIARKHAYTARALRDFDQWLGPMPAIAAE
>NZ_CP049258.1|WP_165174303.1|6007813_6009811_+|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha
MFKKILIANRGEIACRVIKTARRMGIKTVAVYSEADAASLHVDMADEAVAIGAAPAAQSYLVIEKIIEACKATGAEAVHPGYGFLSERSAFPRALAEAGITFIGPNPEAIDAMGDKIESKKAAAAAKVSTVPGHLGIIEDEAEAVKIARKIGYPVMIKASAGGGGKGMRIAHSDAEVTDGFARARSEAKSSFGDDRVFIEKFIVNPRHVEIQVLGDKHGNVIYLGERECSIQRRNQKVIEEAPSPLLDEKTRKAMGEQAVALAKAVNYDSAGTVEFVAGQDRSFFFLEMNTRLQVEHPVTELVTGIDLVEQMIRVAASEKLVLQQKDVKLKGWAVEARVYAEDPYRNFLPSTGRLIKYRPPKESSEDGITVRNDTGVFEGGEISIYYDPMIAKLCTHAGDRATAIAAMGNALDEFYVDGIQHNIPFLAAIMENERWKSGQLSTGFIAEEFPGGFAGNELTPELKARLSAVAVMADHVENRRKRLIGGQMNGRAVKFSRDRVVRLGNDWLPVAIVNEDERVLTLDTGKQCFVKSAWAPGQEVWRGEIDGKPVSVLLRRIPNGYRLSHRGVSIDAYVFNAREAELARLMPAKKAADTSKKLLCPMPGLVVAIAVAEGQEIKAGEPLAIVEAMKMENILRAERDAVVKKVHVKKGDSLAVDAVIMEFA
>NZ_CP049258.1|WP_165171620.1|6009807_6010086_+|acylphosphatase
MTRILHAAIRGRVQGVGYRAWVADTALRLDLTGWVRNRRDGSVEAVFKGADEAVAHMLAACRKGPRSAVVHDIVVSEAADEGWRDFAVRPTL
>NZ_CP049258.1|WP_165171622.1|6010138_6010816_-|lipoyl(octanoyl)-transferase-LipB
MQPRSNIAFSLKSAPSARWEVTPGLTSYEDGIARMERETLAIARGDSPELVWLLEHPPLYTAGTSAKETDLVAADRFPVHKTGRGGQYTYHGPGQRVAYVMLDLRKRGQDVRAFVAGLEAWLIDTLAAFNVKGERREDRVGVWVRRPDKGPDVEEKIAAIGIRVRHSVTFHGISLNVEPDLSHFSGIVPCGVAEHGVTSLVDLGLPVTMEDADVALKAAYREIFG

Crispr_ID: NZ_CP049258_8

• CRISPR_ID: NZ_CP049258_8
• CRISPR_location: 6523344-6523420
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP049258_8

Consensus_repeat	Method
CCCGAAAAGTTGCAGACTTTTCGGA	CRISPRCasFinder

spacers of NZ_CP049258_8

>8.1|6523369|27|NZ_CP049258|CRISPRCasFinder
TCGGCCGATGCGTAAGGAAATCATAGC

CRISPR arrays and Neighbor proteins around NZ_CP049258_8

CRISPR arrays

The CRISPR arrays of NZ_CP049258_8

>merge|NZ_CP049258|8|6523344-6523420|CRISPRCasFinder
CCCGAAAAGTTGCAGACTTTTCGGATCGGCCGATGCGTAAGGAAATCATAGCCCCGAAAAGTTGCAGACTTTTCGGA

>NZ_CP049258|8|8|6523344-6523420|CRISPRCasFinder
CCCGAAAAGTTGCAGACTTTTCGGA	TCGGCCGATGCGTAAGGAAATCATAGC
CCCGAAAAGTTGCAGACTTTTCGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049258.1|WP_165174340.1|6519886_6521038_-|gamma-butyrobetaine-dioxygenase	unknown	unknown	gnl|CDD|274118
NZ_CP049258.1|WP_165172616.1|6534512_6534806_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165172594.1|6512039_6512165_-|DUF2474-family-protein	unknown	unknown	unknown
NZ_CP049258.1|WP_165172602.1|6516061_6519118_+|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|227328
NZ_CP049258.1|WP_165172606.1|6521133_6522045_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|182990
NZ_CP049258.1|WP_165172611.1|6524439_6524895_+|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224439
NZ_CP049258.1|WP_165174341.1|6530686_6532219_+|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143448
NZ_CP049258.1|WP_165172608.1|6522120_6523332_+|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl|CDD|236226
NZ_CP049258.1|WP_165172610.1|6523508_6524021_+|GFA-family-protein	unknown	unknown	gnl|CDD|226314
NZ_CP049258.1|WP_165172618.1|6538829_6539510_-|MipA/OmpV-family-protein	unknown	unknown	gnl|CDD|377682
NZ_CP049258.1|WP_165172604.1|6519296_6519890_-|HD-domain-containing-protein	unknown	unknown	gnl|CDD|226791
NZ_CP049258.1|WP_165172612.1|6525018_6526182_-|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl|CDD|237999
NZ_CP049258.1|WP_165172598.1|6513159_6514584_-|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl|CDD|376587
NZ_CP049258.1|WP_165172600.1|6514690_6515944_-|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP049258.1|WP_165172596.1|6512161_6513163_-|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl|CDD|224213
NZ_CP049258.1|WP_165172617.1|6535380_6536052_-|transposase	unknown	unknown	gnl|CDD|224854
NZ_CP049258.1|WP_165172614.1|6529125_6530187_-|recombinase-RecA	unknown	unknown	gnl|CDD|236476
NZ_CP049258.1|WP_165172613.1|6526245_6528903_-|alanine--tRNA-ligase	unknown	unknown	gnl|CDD|234701
NZ_CP049258.1|WP_165172615.1|6532297_6533968_+|thiamine-pyrophosphate-binding-protein	unknown	unknown	gnl|CDD|181285
NZ_CP049258.1|WP_165172592.1|6510587_6511883_-|homoserine-dehydrogenase	unknown	unknown	gnl|CDD|235783

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP049258.1|WP_165174340.1|6519886_6521038_-|gamma-butyrobetaine-dioxygenase	gnl|CDD|274118	TIGR02409, Probable_gamma-butyrobetaine_dioxygenase, gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.	2.80421e-160
NZ_CP049258.1|WP_165172611.1|6524439_6524895_+|Lrp/AsnC-family-transcriptional-regulator	gnl|CDD|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.29542e-43
NZ_CP049258.1|WP_165172602.1|6516061_6519118_+|CHAT-domain-containing-protein	gnl|CDD|227328	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown].	2.43054e-54
NZ_CP049258.1|WP_165172606.1|6521133_6522045_+|LysR-family-transcriptional-regulator	gnl|CDD|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	3.95964e-60
NZ_CP049258.1|WP_165172615.1|6532297_6533968_+|thiamine-pyrophosphate-binding-protein	gnl|CDD|181285	PRK08199, PRK08199, thiamine pyrophosphate protein; Validated.	0
NZ_CP049258.1|WP_165174341.1|6530686_6532219_+|aldehyde-dehydrogenase-family-protein	gnl|CDD|143448	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.	0
NZ_CP049258.1|WP_165172608.1|6522120_6523332_+|NADP-dependent-isocitrate-dehydrogenase	gnl|CDD|236226	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase.	0
NZ_CP049258.1|WP_165172610.1|6523508_6524021_+|GFA-family-protein	gnl|CDD|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	8.62289e-44
NZ_CP049258.1|WP_165172618.1|6538829_6539510_-|MipA/OmpV-family-protein	gnl|CDD|377682	pfam06629, MipA, MltA-interacting protein MipA. This family consists of several bacterial MltA-interacting protein (MipA) like sequences. As well as interacting with the membrane-bound lytic transglycosylase MltA, MipA is known to bind to PBP1B, a bifunctional murein transglycosylase/transpeptidase. MipA is considered to be a structural protein mediating the assembly of MltA to PBP1B into a complex.	7.69066e-59
NZ_CP049258.1|WP_165172604.1|6519296_6519890_-|HD-domain-containing-protein	gnl|CDD|226791	COG4341, COG4341, Predicted HD phosphohydrolase [General function prediction only].	1.6499e-75
NZ_CP049258.1|WP_165172612.1|6525018_6526182_-|cyclic-nucleotide-binding-domain-containing-protein	gnl|CDD|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	7.38033e-24
NZ_CP049258.1|WP_165172598.1|6513159_6514584_-|cytochrome-ubiquinol-oxidase-subunit-I	gnl|CDD|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	0
NZ_CP049258.1|WP_165172600.1|6514690_6515944_-|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.90817e-72
NZ_CP049258.1|WP_165172596.1|6512161_6513163_-|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl|CDD|224213	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion].	3.51301e-107
NZ_CP049258.1|WP_165172617.1|6535380_6536052_-|transposase	gnl|CDD|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.77856e-29
NZ_CP049258.1|WP_165172614.1|6529125_6530187_-|recombinase-RecA	gnl|CDD|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP049258.1|WP_165172613.1|6526245_6528903_-|alanine--tRNA-ligase	gnl|CDD|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP049258.1|WP_165172592.1|6510587_6511883_-|homoserine-dehydrogenase	gnl|CDD|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0

Protein sequences

>NZ_CP049258.1|WP_165172608.1|6522120_6523332_+|NADP-dependent-isocitrate-dehydrogenase
MAKIKVANPVVELDGDEMTRIIWDLIKTKLIHPYLDVPLEYYDLSVENRDKTKDQVTIDAAHAIKKHGVGVKCATITPDEGRVKEFNLQQMWKSPNGTIRNILGGVIFREPIICSNVPRLVPGWTQPIIVGRHAFGDQYRATDFKFPGKGKLTIKFVGEDGKTIEHEVFSAPGSGVAMAMYNLDESIKEFARASLNYGLNRNYPVYLSTKNTILKVYDGRFKDIFQEVYDSEFKAEFEKRKIFYEHRLIDDMVASALKWTGGYVWACKNYDGDVQSDTVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYRLHQQGKQTSTNSTASIFAWSRGLAHRAKLDNNEALRKFADTLEKVTVATIEEGKMTKDLAVLVGPDQAWLSTEGFIDAVDKALQKAMA
>NZ_CP049258.1|WP_165172606.1|6521133_6522045_+|LysR-family-transcriptional-regulator
MTEQGELSPPLIWLKAFEAAARHASFTLASQELGLTQAAVSQQIKALEGRLGARLFHRRQRGVALTAEGAAYLPHIQQAFASLGRSTQELFGRRSRQTMTILSPISFAALWLAPRLPLLERETDGLGIDITTMHLPDAYEATDAAFDIRFGLSDWPGRTAYRLTSERLTPVAAPGALKARAKQAADIWRRLPLLTVRGAREMWPDWFALAGEPPRGVARYRFDSFIAAMSAAEAGAGILLGSRPLIDAALRRKTLVRLSDFELQSAAGHFLTHAAGRPLSPAQAAFLAALTRAAAQETATPLV
>NZ_CP049258.1|WP_165174340.1|6519886_6521038_-|gamma-butyrobetaine-dioxygenase
MPLKNATLIDGGKAVGLDWTSGEYARFHALWLRDNAPDGATRSATNGQRLITLLDIPVETKITAAEISAGGDLTLTFAPEGKAVTYSATWLAAHIYDRRPEQKAGWLAPEIETWDGRLQARMPVVGHEESQADRAAFGQWLAGVRRYGFGLMTGVPRASGALIDVARMFGYVRETNYGQWFEVRAEVNPNNLAYTNLGLQAHTDNPYRDPVPTLQLLACLENTVDGGDSVVVDGFRAALRLSDEDPKGFALLTRHSARFEYAGSAGVRLRAKRPMIELGPDGELIAIRFNNRSAAAFTDIPYDDMAGFYAAYRRFAEIIEDPAMEVTFKLKPGELFIVDNTRVLHARKSFSSSGTRWLQGCYADKDGLLSTLAAIEHEQKEAA
>NZ_CP049258.1|WP_165172604.1|6519296_6519890_-|HD-domain-containing-protein
MKSDLAVDRSTIVAFIADIFERRGAESYLGEPVTMSQHMLQGAVLAEREGAGDELVAAALLHDIGHYTSEFGPYSPDDTEDNHHDEAGAKVLEHFFPPVITECVRLHVAAKRYLCATDETYYGKLSPASRHTLELQGGAMSAAEVAEFRRNPFYQEAVRVRLWDEGGKDPDMATPPFRHYVPVLQRVVDRYAAGHEA
>NZ_CP049258.1|WP_165172602.1|6516061_6519118_+|CHAT-domain-containing-protein
MHLPVVIIFVAALLAAGAPARAQSLEAAETAPSAETTAPPAPEADAAKLACPDAMRIYSEAAGDSDKALPPAPQATVSGTPDRAAAASRKEDKIAASRKRLADTITKFGEKAPRTAQAYRLLARDYRDAAKYEDSVTALEAAMRIADAAVGKKRAELADIQMELAQTYTNKGDRLSALAMYNAARNTFEEALGSDHPKVALALHNIGKIDLNMTQFEPALAAFATARKVYEANLPAETSRLVELLIDTSSVHARIGNRETALAFAKEAVALAREKLGPDHRSNALALHFAGTINRGMGRSADALTDLGAALRIYLGNEAKTRRRIPEVLDDVSVALVRADCLDQAVEVQTLSIAHYAALYGENHNRVASAYHRLGGLYRESGKFAEARAPLFKAASIYENIFGPNHRRIADVYADLASASARIDLNSEALRYGFRALRIRNVNKQADPEDLRQSYWSLSIVLKQQGDMTAAIAFAKMAVNINQEIRSQNRNLPEELTRALAGRYRELYEYLANMLIGAGRLQEAQQVLDLIKQQELFDFVRRDSKDANLDGRAALTPTEADLSAKIMELVEAPISAAEEIEALKKKQAELGLSKDEEHLVSTLEQSLADQFRRQQTVIDDLLAEVENANRDIEREVNRLDLDLVDATQERLKGMKGRAVELQIASLDDALHIFLTTERTGIHKEVPVGRKEMAFLVFKARSATAGRDPEARQHLQRLYDILVKPVAPELKAARAEVLMFNLSGVLRYVPLAALHSGERYLVEDYAVALSTTAANTRYEALPRERGKAAGFGVTKPHEGFSALPGVAEELETVFDGADTKGYLAGKPLMDEGFNSESMGEALKAKPLYLHVASHFRLVPGDASNSVLLLGDGRRLSLDEFRKDERFRLTDLDLLTLSACETAGGVDQTGAEIESFASVVQKRGASSVLATLWPIADSSTSLLMADFYKNFLALGADKATSLRKAQIAMLKGELKPTTQVTASRSASETIETPIADTLADEPGFQHPYFWSAFILMGNWL
>NZ_CP049258.1|WP_165172600.1|6514690_6515944_-|MFS-transporter
MTAAESPESPSSPPSQASVFRHRGFLYYWLARLLVSFATQIISVAVGWQVYDLTRNPLDLGLVGLVQFLPSLLLVLVTGAVADRHNRRAIMAICLALEAAICAGLIVFTWSRSAEVWPVFALLAVFGVARAFMGPASQSLVPNLVPQKELSTAIAWNSSSWQIATITGPVAGGLLYGLSEYAAYGAALTLLATGAVLVGLMPKPVQLRSEQARSLATLFAGFRYVWSEKVVLGAISLDLFAVLLGGAMALLPVYARDILDAGPWGLGLLRAAPGFGALIVAAWLTRNTIRDHAGLIMFIFVAGFGFFTMVFGASTTVWLSVLALALAGACDMISVYVRETLIQLWTPDDVRGRVNAVNMVFIGASNELGEFRAGISAFLFGAVPAVVFGGAGTIAVALLWAMWFPQLRQVRRLDRGR
>NZ_CP049258.1|WP_165172598.1|6513159_6514584_-|cytochrome-ubiquinol-oxidase-subunit-I
MDSFDPVLLARWQFAFTVSFHIVFPSFSIGLASYLAVLEGLWLATGRTTYLTLFNYWKKIFAVAFGMGVVSGLVMAYQFGTNWSVFSDKAGPIIGPLMGYEVLTAFFLEAGFLGVMLFGLNKVGRSLHYIATLMVAIGTFISAFWILSANSWMQTPVGYTINAVGQFAPTDWWAIVFNPSFPYRLVHMVIAAYLTTALVVGGVGAWHLLRDRLNDGSRVMFSMAMWMLAIVAPIQILAGDLHGLNTLEHQPAKIAAMEGHFETRAGAPLILFGWPDMEAEKTLYEIAIPKLGSLILKHEWDGVVKGLKDWPKEDRPNATIVFWSFRIMVGLGFLMLGLGLWSLWGRYRKRLYEMKGLHVASVLMGPLGFVAVLAGWVTTEVGRQPYTVYGVLRTADSAAPIAAQAVAASLIAFVVVYFFVFGAGVFYLLRLMSKPPHENEPDSPSDAHLRAAGIVPAPALETVGELATYPEDRR
>NZ_CP049258.1|WP_165172596.1|6512161_6513163_-|cytochrome-d-ubiquinol-oxidase-subunit-II
MMLDLAFIWAAIIAFAVLAYVMMDGFDLGIGILFPFYKSEADRDRMMNSVAPVWDGNETWLVLGGGGLFAVFPLAYAAIMPALYAPIIIMLLALVFRGVAFEYRWRTRRGKFLWDWAFALGSLAATFTQGIALGTIVQGIPIVDRAYAGGWWTWLTPFSFFTGLALVVGYALLGATWLILKTDEQLQERSYRFAMILGPATLILIGLVSLWTPFLEPLYMERWFSWPRMLYTIPVPLLVALAAYLLIRGLVRREEYTPFLASLALFLLSFIGLGVSFYPYMVPPTLTIWDAAGPEESLSFLLVGAVVLVPIILAYTAYSYWVFRGKVGSEGYH
>NZ_CP049258.1|WP_165172594.1|6512039_6512165_-|DUF2474-family-protein
MKADQPEPPWRYRLLWFVLLWVAGILAVGAAAMIIRLFLGL
>NZ_CP049258.1|WP_165172592.1|6510587_6511883_-|homoserine-dehydrogenase
MANSLKLGVAGLGTVGTGLLDLLAKHGPLVARRAGRPIEITAVSARDKAKDRGHDLSRLAWFDDPVALARSEKIDVFVELMGGEGDPAKAAVTAALQAGKPVVTANKALLAHHGAGLAKIADEKAIALNFEASVAGGIPIVKTMREALAGNQAAKVFGILNGTCNYILTKMAQEGRSFADVLKEAQELGYAEADPTFDIGGFDTAHKLAILTSLAFGTEVNVAAIEIEGIEALTLADIRNADEMGFKIKLLGVAVASAEGLEQRVHPTLVPKGSPVADTDGVFNAVVVHNDFAGDLMLEGRGAGSHPTASAVLADIVDIARGNLRPAFGVPAKELRKYKAAPKRAHEGGYYVALELYDKPGAVAAIAKVLADEKISIESIVQRAPAKEGAIASFMLVTHKTLDSSMRQALSRIERDGHVASKPRTIRIERL
>NZ_CP049258.1|WP_165172610.1|6523508_6524021_+|GFA-family-protein
MARPVFTGGCQCGAVRYRIEGPLGRAGICHCRMCQKAFGSWGAALVSVPVAQLTWSRGQPSEFRSSAIVARGFCAQCGTPLHMKEDGDPVYEIAIGSLDAPELAPPTEQSGVEAELSWFKSLSALPRQATEDYRSPQDMAKLRSLQHPDHDTERASRRSQTTAPKRKRAN
>NZ_CP049258.1|WP_165172611.1|6524439_6524895_+|Lrp/AsnC-family-transcriptional-regulator
MLDKTDRAILAELQNDATLTVDALAERIHLSRNACWRRVKQLEETGVIKGRVALLDAGKLGLGLTAFIAIRTAQHEEKWLEKFSRAVRDFPEIIGVYRTTGETDYLLQAVVSDIAGYDQLYKRLIARIALTDVSASFVMEKIKETTALPLD
>NZ_CP049258.1|WP_165172612.1|6525018_6526182_-|cyclic-nucleotide-binding-domain-containing-protein
MASVSARRRAYEIIEPGIKRDRPALWFERASILIILASVAVAVASTVEGLDLGILRDLYAGEFAFGLFFLGEYAARLWTAPEHPVFGGENGRGVAAFMLSPLMLLDAAGLVPLFLLVVRPHALAPILIFQVLRFFRLARYSPALATVGRVLSSEWRPLMAAGLIGLGLLLVAATGMYLIEHDVQPVNFGSIPAAMYWAVVTVVTVGYGDVVPITPLGKLFTGFVMLGGLVFFALPVAIIATGFLAEIRRRDFIVNYGMVARVPAFAGLDGAALAELVSLLRARKFPPNTIIIRKGEEGDSMYFIATGEVEVVLPHQTVILEEGDFFGEVAVLGRVKRTATVIARRTCELLVLDAADVIKFMEQNPRVETALRAAMNARQPAQQSTPA
>NZ_CP049258.1|WP_165172613.1|6526245_6528903_-|alanine--tRNA-ligase
MTGLAQIRSTFLDFFRKQGHEVVASSPLVPRNDPTLMFANSGMVQFKNVFTGAEKRPYRRATTAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKPEAIEWAWTLVTKDYALPKDRLTVTVYSEDDDAFDLWKKIAGLPESRIIRIPTSDNFWAMGDTGPCGPCSEIFFDHGDKIAGGPPGSADADGDRFIEIWNLVFMQFEQVTKDERITLPRPSIDTGMGLERISAVLQGTHDNYETDLFRSLIATIVEETNVPADDKYKASNRVIADHLRASSFLIADGVLPSNEGRGYVLRRIMRRAMRHAELLGVKEPLMWKLVPALVREMGGAYPELGRAEALIEETLKLEETRFRKTLERGLRILDDESASLGKGHVFSGETAFKLYDTYGFPLDLTQDALKPRGIAVDVEAFDKAMQKQREDARQAWKGSGEAKTDTIWFDIRERVGASEFLGYDTEQAEGVVQTVVTEGKEVPELKAGAKGAIVLNQTPFYGESGGQTGDHGVIRSGSGALFRVTDTQKRVGDLLVHQGVVEKGAFKPGDAVELDVDHVRRSGNRQHHSATHLLHEALRETLGSHVAQKGSLVEPDRLRFDFSHNKALSAEEIAAVEAMANAIVLQNDPVTTRLMSVDEAIAEGAMALFGEKYGDEVRVVSMGVRPEGNRRIYSLELCGGTHAVRTGDIGLIKVVSESASAAGVRRVEALAGEAAKRYLDTQDKRVHAAASVLRVTPADVVPRIEALLDERKRLERELAEAKKQLALGGGSAKGDDGITEAGGVKLMARVIKGINPKDMKGLVDDGKAKLGSGVVALVGLNDEGRAGIIVGVTEDLIKRFNAVDLVRIGSEVLGGKGGGGRPDMAQAGGPDASKAEAALQAIKDAVAA
>NZ_CP049258.1|WP_165172614.1|6529125_6530187_-|recombinase-RecA
MGQANLKVVENTGMDKSKALDAALSQIERAFGKGSIMKLGATQSLDIAAISTGSLGLDIALGIGGLPKGRVIEIYGPESSGKTTLALQTVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDTGEQALEIADTLVRSGAIDVLVVDSVAALTPRAELEGEMGDSLPGLQARLMSQALRKLTASISKSNCMVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKEREEVVGNQTRVKVVKNKVAPPFKQVEFDIMYGEGISKVGELVDLGVTAGIVEKSGSWYSYNGERIGQGRENAKTFLKQNPDVANAIEQAIRANAGLIAAKITNTSAEDAD
>NZ_CP049258.1|WP_165174341.1|6530686_6532219_+|aldehyde-dehydrogenase-family-protein
MNKPEAPTSLSRDVAAFFAELGLPADSLTAGNTEIHSPITGEVIARVRFADAAEAKAAIGRSAEAFRTWRLVPAPVRGELIRQLGNELRAAKEGLGRLVTIETGKILSEGLGEVQEMIDICDFAVGLSRQLYGLTMVSERADHRLMEQWHPLGPTGVITAFNFPVAVWSWNAALALVCGNPVIWKPSEKTPLTAMATVALFRRAAARMDNVPADLVTLLIGGRDVGEALVDDPRVPLVSATGSTGMGRIVGERLARRFGRAILELGGNNAAILCPSADLDLALRATAFAAIGTAGQRCTSLRRIIVQASVYDSFVPRLKKVYETVAIGNPMQASTLVGPLIDRRSYDAMQKALAAAAAAGGKVHGGKRVKGPGGDDAYYVAPALVEMPAQTGPVLAETFAPILYVMRYENFDEALALHNGVPQGLSSAIFTTDLRESERFLSASGSDCGLANVNMGSSGAEIGGAFGGEKETGGGRESGSDAWKAYMRRVTSAINFGHALPLAQGVKFDI
>NZ_CP049258.1|WP_165172615.1|6532297_6533968_+|thiamine-pyrophosphate-binding-protein
MTKRSGGQILVDQLLVQGVERLACVPGESYLAVLDALHDASIDVLVCRNEGGAAMMAEAYGKLTGRPGICFVTRGPGATNASHGIHIAAQDSTPMILFIGQVERAMREREAFQEVDYKAFFGSMAKWVVEVDSAARLPELVARAFRVACQGRPGPVVIALPEDVLVEMADVADAPKVIPAESAPAPQDMSRFANLLRDAKKPLFILGGSRWSAEAQKSLIGFAEKFGVGITTSFRRAHLFPSDHPNYVGDVGIGPNPRLAARVKEADLLVLLGARMSEMPSSSYSLIDIPNPRQTLVHIHPGAEELGRVYQPALAIQASPNAFCAALADLAQPNDRPWAEATRQAHQDFLDWTDKPAKLPGKFQYGEAMKWLRERLPAEAIITNGAGNYAIWVHRYYRFRKLGTQVAPTSGSMGYGVPAAVMAKRQCPDSPVVAFAGDGCFMMNGQEFATAVQYGIPLIVIVLDNSMYGTIRMHQEREYPGRVSATVLKNPDFAAYAKAFGGHGERVETTEDFAPAFERAVQSGKPAILHCIVDPEAITPARTLSQIREEAVKAGK
>NZ_CP049258.1|WP_165172616.1|6534512_6534806_-|hypothetical-protein
MSGKRPLLDKHAQRAIIVPFPTATTMELEVSTIGTSHVLNRTFDKNSIFVEFVPGTRGRISLVRLRFYDEDVPLFAVLKADSAEMEKAVLITTAWPA
>NZ_CP049258.1|WP_165172617.1|6535380_6536052_-|transposase
MARLARVVVPGLPHHVTQRGNGRQQTFFGDADYALYRDFLAESLKAACVACWAWVLMPNHVHLILAPSDEDGLRRALAPVHRRHAGVIHSRRKRSGHFWQGRFGCAVMDEDHLAAALVYVMLNPVRARLAGRAQDWRWSSARAYLRCAADGLTQTRPVLERFPDMGEMLKREADADAMIRLRTAETIGRPLGDPAFLRRIERRTGRDLMPGKRGPKSKQRTGD
>NZ_CP049258.1|WP_165172618.1|6538829_6539510_-|MipA/OmpV-family-protein
MIGGGAGYGPDYEGSDDYEFQPFPFASIVYDNFVFIEGTSVGLNLLNYDGLAAGPLARYGGGRDEDDNNALDGLGDIDGAIELGGFLKYELGIWSAALTVTQDVGGGHEGMVAEMATGVAVPLSETLSSSVEASASWADSTYMDSYFGVSRTQSAKSGHSRYAADSGFKDVGIALGLNYMISEAVGVSGLVQYTRLVGDAADSPIVEDKGSADQFFTGMFLTYRFR

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	575280-575306	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	583093-583119	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	818628-818654	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	1653874-1653900	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	1683508-1683534	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	1780663-1780689	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	1935009-1935035	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	3202365-3202391	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	3373212-3373238	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	3453089-3453115	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	3659886-3659912	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	4021885-4021911	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	4813559-4813585	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	4863670-4863696	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	770611-770637	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	1856712-1856738	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	3297221-3297247	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	4391370-4391396	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	5368093-5368119	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	5406313-5406339	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	6152035-6152061	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	6220903-6220929	0	1.0
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	2254763-2254789	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	2532163-2532189	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	2579219-2579245	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	4027870-4027896	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	7165017-7165043	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	835107-835133	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	2316679-2316705	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	2908887-2908913	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	5052031-5052057	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	5415987-5416013	1	0.963
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	1757060-1757086	2	0.926
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	5765156-5765182	2	0.926
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	6524956-6524982	2	0.926
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	1612207-1612233	2	0.926
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	3313831-3313857	2	0.926
NZ_CP049258_2	2.1|1938781|27|NZ_CP049258|CRISPRCasFinder	1938781-1938807	27	NZ_CP049258.1	4668681-4668707	2	0.926
NZ_CP049258_5	5.15|4654849|19|NZ_CP049258|CRISPRCasFinder,CRT	4654849-4654867	19	NZ_CP049258.1	3469831-3469849	2	0.895

1. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 575280-575306, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

2. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 583093-583119, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

3. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 818628-818654, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

4. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 1653874-1653900, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

5. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 1683508-1683534, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

6. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 1780663-1780689, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

7. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 1935009-1935035, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

8. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 3202365-3202391, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

9. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 3373212-3373238, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

10. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 3453089-3453115, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

11. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 3659886-3659912, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

12. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 4021885-4021911, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

13. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 4813559-4813585, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

14. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 4863670-4863696, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

15. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 770611-770637, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

16. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 1856712-1856738, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

17. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 3297221-3297247, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

18. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 4391370-4391396, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

19. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 5368093-5368119, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

20. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 5406313-5406339, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

21. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 6152035-6152061, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

22. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 6220903-6220929, mismatch: 0, identity: 1.0

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggatta	Protospacer
***************************

23. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 2254763-2254789, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgttttgcgcatcggatta	Protospacer
********** ****************

24. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 2532163-2532189, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatatgcgcatcggatta	Protospacer
************ **************

25. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 2579219-2579245, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttacgcatcggatta	Protospacer
**************.************

26. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 4027870-4027896, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgcgcatcggagta	Protospacer
************************ **

27. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 7165017-7165043, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatctgcgcatcggatta	Protospacer
************.**************

28. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 835107-835133, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
tacctctttgatttgcgcatcggatta	Protospacer
** ************************

29. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 2316679-2316705, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttgagcatcggatta	Protospacer
*************** ***********

30. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 2908887-2908913, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatttacgcatcggatta	Protospacer
**************.************

31. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 5052031-5052057, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgttttgcgcatcggatta	Protospacer
********** ****************

32. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 5415987-5416013, mismatch: 1, identity: 0.963

taactctttgatttgcgcatcggatta	CRISPR spacer
tatctctttgatttgcgcatcggatta	Protospacer
** ************************

33. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 1757060-1757086, mismatch: 2, identity: 0.926

taactctttgatttgcgcatcggatta	CRISPR spacer
tatctctttgatttgcgcatcggctta	Protospacer
** ******************** ***

34. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 5765156-5765182, mismatch: 2, identity: 0.926

taactctttgatttgcgcatcggatta	CRISPR spacer
taactcttcgaattgcgcatcggatta	Protospacer
********.** ***************

35. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 6524956-6524982, mismatch: 2, identity: 0.926

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgatatgcgcatcggacta	Protospacer
************ ***********.**

36. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 1612207-1612233, mismatch: 2, identity: 0.926

taactctttgatttgcgcatcggatta	CRISPR spacer
taactctttgaattacgcatcggatta	Protospacer
*********** **.************

37. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 3313831-3313857, mismatch: 2, identity: 0.926

taactctttgatttgcgcatcggatta	CRISPR spacer
tagctctttgatttgtgcatcggatta	Protospacer
**.************.***********

38. spacer 2.1|1938781|27|NZ_CP049258|CRISPRCasFinder matches to position: 4668681-4668707, mismatch: 2, identity: 0.926

taactctttgatttgcgcatcggatta	CRISPR spacer
taacccttagatttgcgcatcggatta	Protospacer
****.*** ******************

39. spacer 5.15|4654849|19|NZ_CP049258|CRISPRCasFinder,CRT matches to position: 3469831-3469849, mismatch: 2, identity: 0.895

gcccgctctgacgatcgtc	CRISPR spacer
gctcgctctggcgatcgtc	Protospacer
**.*******.********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP049258_1	1.1|1444529|26|NZ_CP049258|CRISPRCasFinder	1444529-1444554	26	NC_009806	Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence	175645-175670	4	0.846
NZ_CP049258_1	1.1|1444529|26|NZ_CP049258|CRISPRCasFinder	1444529-1444554	26	NZ_CP009112	Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence	354523-354548	4	0.846
NZ_CP049258_5	5.4|4654179|32|NZ_CP049258|CRISPRCasFinder,CRT	4654179-4654210	32	MN862068	Brevundimonas phage vB_BsubS-Delta, complete genome	38915-38946	4	0.875
NZ_CP049258_1	1.1|1444529|26|NZ_CP049258|CRISPRCasFinder	1444529-1444554	26	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	498955-498980	5	0.808
NZ_CP049258_5	5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT	4654362-4654393	32	MT178448	Vibrio phage vB_VpP_FE11, complete genome	13880-13911	5	0.844
NZ_CP049258_5	5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT	4654362-4654393	32	LR794124	Vibrio phage vB_Vc_SrVc9 genome assembly, chromosome: 1	13231-13262	5	0.844
NZ_CP049258_5	5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT	4654362-4654393	32	MT501516	Vibrio phage vB_VpaP_MGD1, complete genome	14473-14504	5	0.844
NZ_CP049258_5	5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT	4654362-4654393	32	NC_048035	Vibrio phage vB_VpaP_KF1, complete genome	39988-40019	5	0.844
NZ_CP049258_5	5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT	4654362-4654393	32	NC_012662	Vibrio phage VP93, complete genome	13376-13407	5	0.844
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	KF626665	Phage Sano, complete genome	41068-41099	5	0.844
NZ_CP049258_3	3.5|2023506|33|NZ_CP049258|PILER-CR,CRT	2023506-2023538	33	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	2127194-2127226	6	0.818
NZ_CP049258_3	3.5|2023506|33|NZ_CP049258|PILER-CR,CRT	2023506-2023538	33	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1056049-1056081	6	0.818
NZ_CP049258_3	3.15|2023505|34|NZ_CP049258|CRISPRCasFinder	2023505-2023538	34	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	2127194-2127227	6	0.824
NZ_CP049258_3	3.15|2023505|34|NZ_CP049258|CRISPRCasFinder	2023505-2023538	34	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1056049-1056082	6	0.824
NZ_CP049258_5	5.38|4656239|32|NZ_CP049258|CRISPRCasFinder,CRT	4656239-4656270	32	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	525231-525262	6	0.812
NZ_CP049258_3	3.1|2023262|33|NZ_CP049258|PILER-CR,CRT	2023262-2023294	33	NZ_CP045549	Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence	69711-69743	7	0.788
NZ_CP049258_3	3.5|2023506|33|NZ_CP049258|PILER-CR,CRT	2023506-2023538	33	NC_011758	Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence	83088-83120	7	0.788
NZ_CP049258_3	3.5|2023506|33|NZ_CP049258|PILER-CR,CRT	2023506-2023538	33	NZ_CP035710	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence	127181-127213	7	0.788
NZ_CP049258_3	3.15|2023505|34|NZ_CP049258|CRISPRCasFinder	2023505-2023538	34	NC_011758	Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence	83087-83120	7	0.794
NZ_CP049258_3	3.15|2023505|34|NZ_CP049258|CRISPRCasFinder	2023505-2023538	34	NZ_CP035710	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence	127180-127213	7	0.794
NZ_CP049258_3	3.22|2023872|32|NZ_CP049258|CRT	2023872-2023903	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	847780-847811	7	0.781
NZ_CP049258_5	5.8|4654423|32|NZ_CP049258|CRISPRCasFinder,CRT	4654423-4654454	32	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	233873-233904	7	0.781
NZ_CP049258_5	5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT	4655019-4655050	32	MN694427	Marine virus AFVG_250M959, complete genome	36097-36128	7	0.781
NZ_CP049258_5	5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT	4655019-4655050	32	MN693923	Marine virus AFVG_250M958, complete genome	17142-17173	7	0.781
NZ_CP049258_5	5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT	4655873-4655904	32	NZ_CP008954	Amycolatopsis japonica strain DSM 44213 plasmid pAmyja1, complete sequence	89123-89154	7	0.781
NZ_CP049258_5	5.35|4656056|32|NZ_CP049258|CRISPRCasFinder,CRT	4656056-4656087	32	NC_027348	Delftia phage RG-2014, complete genome	69669-69700	7	0.781
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	469670-469701	7	0.781
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	CP000663	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence	131187-131218	7	0.781
NZ_CP049258_5	5.39|4656300|32|NZ_CP049258|CRISPRCasFinder,CRT	4656300-4656331	32	NZ_CP044049	Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence	192913-192944	7	0.781
NZ_CP049258_5	5.49|4655999|28|NZ_CP049258|PILER-CR	4655999-4656026	28	MG945617	UNVERIFIED: Microviridae sp. isolate 5105-1801, complete genome	3522-3549	7	0.75
NZ_CP049258_3	3.3|2023384|33|NZ_CP049258|PILER-CR,CRT	2023384-2023416	33	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	794962-794994	8	0.758
NZ_CP049258_3	3.3|2023384|33|NZ_CP049258|PILER-CR,CRT	2023384-2023416	33	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	615358-615390	8	0.758
NZ_CP049258_3	3.9|2023750|33|NZ_CP049258|PILER-CR,CRT	2023750-2023782	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1064522-1064554	8	0.758
NZ_CP049258_3	3.9|2023750|33|NZ_CP049258|PILER-CR,CRT	2023750-2023782	33	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1043035-1043067	8	0.758
NZ_CP049258_3	3.11|2023261|34|NZ_CP049258|CRISPRCasFinder	2023261-2023294	34	NZ_CP045549	Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence	69711-69744	8	0.765
NZ_CP049258_3	3.11|2023261|34|NZ_CP049258|CRISPRCasFinder	2023261-2023294	34	MK962635	Achromobacter phage vB_AxyS_19-32_Axy18, complete genome	17091-17124	8	0.765
NZ_CP049258_3	3.11|2023261|34|NZ_CP049258|CRISPRCasFinder	2023261-2023294	34	NC_029033	Achromobacter phage phiAxp-1, complete genome	16637-16670	8	0.765
NZ_CP049258_3	3.11|2023261|34|NZ_CP049258|CRISPRCasFinder	2023261-2023294	34	MK962636	Achromobacter phage vB_AxyS_19-32_Axy19, complete genome	16746-16779	8	0.765
NZ_CP049258_3	3.11|2023261|34|NZ_CP049258|CRISPRCasFinder	2023261-2023294	34	MK962637	Achromobacter phage vB_AxyS_19-32_Axy20, complete genome	17060-17093	8	0.765
NZ_CP049258_3	3.13|2023383|34|NZ_CP049258|CRISPRCasFinder	2023383-2023416	34	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	794961-794994	8	0.765
NZ_CP049258_3	3.13|2023383|34|NZ_CP049258|CRISPRCasFinder	2023383-2023416	34	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	615357-615390	8	0.765
NZ_CP049258_3	3.22|2023872|32|NZ_CP049258|CRT	2023872-2023903	32	NZ_CP033222	Parasedimentitalea marina strain W43 plasmid pW43C, complete sequence	127975-128006	8	0.75
NZ_CP049258_5	5.1|4653998|30|NZ_CP049258|CRISPRCasFinder,CRT	4653998-4654027	30	NZ_CP042265	Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence	434985-435014	8	0.733
NZ_CP049258_5	5.2|4654057|32|NZ_CP049258|CRISPRCasFinder,CRT	4654057-4654088	32	MK059749	Mycobacterium phage CRB2, complete genome	54665-54696	8	0.75
NZ_CP049258_5	5.2|4654057|32|NZ_CP049258|CRISPRCasFinder,CRT	4654057-4654088	32	NZ_CP029835	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence	283241-283272	8	0.75
NZ_CP049258_5	5.2|4654057|32|NZ_CP049258|CRISPRCasFinder,CRT	4654057-4654088	32	MT711978	Streptomyces phage Endor1, complete genome	6097-6128	8	0.75
NZ_CP049258_5	5.10|4654545|31|NZ_CP049258|CRISPRCasFinder,CRT	4654545-4654575	31	NZ_CP024200	Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence	647310-647340	8	0.742
NZ_CP049258_5	5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT	4654605-4654636	32	NZ_CP021373	Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence	462652-462683	8	0.75
NZ_CP049258_5	5.12|4654666|32|NZ_CP049258|CRISPRCasFinder,CRT	4654666-4654697	32	NC_042036	Mycobacterium phage Rockstar, complete genome	17394-17425	8	0.75
NZ_CP049258_5	5.13|4654727|32|NZ_CP049258|CRISPRCasFinder,CRT	4654727-4654758	32	NZ_CP023312	Vibrio anguillarum strain VIB12 isolate Sea bass plasmid p292, complete sequence	203356-203387	8	0.75
NZ_CP049258_5	5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT	4655019-4655050	32	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	77160-77191	8	0.75
NZ_CP049258_5	5.28|4655630|32|NZ_CP049258|CRISPRCasFinder,CRT	4655630-4655661	32	NZ_CP035471	Escherichia coli strain U12A plasmid pU12A_D, complete sequence	12733-12764	8	0.75
NZ_CP049258_5	5.28|4655630|32|NZ_CP049258|CRISPRCasFinder,CRT	4655630-4655661	32	KX863569	Uncultured bacterium plasmid pTRE-131 clone TRE-131, complete sequence	15853-15884	8	0.75
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	KX833905	Lactococcus phage PLg-TB25, complete genome	33621-33652	8	0.75
NZ_CP049258_5	5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT	4655873-4655904	32	NZ_CP054029	Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence	421402-421433	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	107895-107926	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	KR080197	Mycobacterium phage FlagStaff, complete genome	44473-44504	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	1097481-1097512	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	369102-369133	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	423730-423761	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	1195989-1196020	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	350845-350876	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	748197-748228	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	1145502-1145533	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	805633-805664	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	760256-760287	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1151066-1151097	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	956641-956672	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	256534-256565	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	782393-782424	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	556604-556635	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	341092-341123	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	155941-155972	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	316259-316290	8	0.75
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	368763-368794	8	0.75
NZ_CP049258_5	5.39|4656300|32|NZ_CP049258|CRISPRCasFinder,CRT	4656300-4656331	32	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	243105-243136	8	0.75
NZ_CP049258_5	5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT	4656361-4656392	32	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	506761-506792	8	0.75
NZ_CP049258_5	5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT	4656483-4656514	32	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	125537-125568	8	0.75
NZ_CP049258_5	5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT	4656483-4656514	32	NC_014723	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH02, complete sequence	159346-159377	8	0.75
NZ_CP049258_5	5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT	4656483-4656514	32	KR131710	Fusobacterium phage Funu1, complete genome	10521-10552	8	0.75
NZ_CP049258_3	3.3|2023384|33|NZ_CP049258|PILER-CR,CRT	2023384-2023416	33	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1307034-1307066	9	0.727
NZ_CP049258_3	3.3|2023384|33|NZ_CP049258|PILER-CR,CRT	2023384-2023416	33	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1104116-1104148	9	0.727
NZ_CP049258_3	3.5|2023506|33|NZ_CP049258|PILER-CR,CRT	2023506-2023538	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1690665-1690697	9	0.727
NZ_CP049258_3	3.11|2023261|34|NZ_CP049258|CRISPRCasFinder	2023261-2023294	34	NZ_CP029986	Sphingomonas sp. FARSPH plasmid p01, complete sequence	22103-22136	9	0.735
NZ_CP049258_3	3.11|2023261|34|NZ_CP049258|CRISPRCasFinder	2023261-2023294	34	NZ_CP044073	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence	147376-147409	9	0.735
NZ_CP049258_3	3.13|2023383|34|NZ_CP049258|CRISPRCasFinder	2023383-2023416	34	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1307034-1307067	9	0.735
NZ_CP049258_3	3.13|2023383|34|NZ_CP049258|CRISPRCasFinder	2023383-2023416	34	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1104115-1104148	9	0.735
NZ_CP049258_3	3.15|2023505|34|NZ_CP049258|CRISPRCasFinder	2023505-2023538	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1690665-1690698	9	0.735
NZ_CP049258_3	3.19|2023749|34|NZ_CP049258|CRISPRCasFinder	2023749-2023782	34	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1064521-1064554	9	0.735
NZ_CP049258_3	3.19|2023749|34|NZ_CP049258|CRISPRCasFinder	2023749-2023782	34	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1043035-1043068	9	0.735
NZ_CP049258_3	3.19|2023749|34|NZ_CP049258|CRISPRCasFinder	2023749-2023782	34	MN369753	Gordonia phage Sukkupi, complete genome	40753-40786	9	0.735
NZ_CP049258_3	3.19|2023749|34|NZ_CP049258|CRISPRCasFinder	2023749-2023782	34	MK376960	Gordonia phage BiPauneto, complete genome	40862-40895	9	0.735
NZ_CP049258_3	3.19|2023749|34|NZ_CP049258|CRISPRCasFinder	2023749-2023782	34	MN369766	Gordonia phage Yndexa, complete genome	40753-40786	9	0.735
NZ_CP049258_5	5.8|4654423|32|NZ_CP049258|CRISPRCasFinder,CRT	4654423-4654454	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1391749-1391780	9	0.719
NZ_CP049258_5	5.8|4654423|32|NZ_CP049258|CRISPRCasFinder,CRT	4654423-4654454	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1960064-1960095	9	0.719
NZ_CP049258_5	5.8|4654423|32|NZ_CP049258|CRISPRCasFinder,CRT	4654423-4654454	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	214635-214666	9	0.719
NZ_CP049258_5	5.9|4654484|32|NZ_CP049258|CRISPRCasFinder,CRT	4654484-4654515	32	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	65716-65747	9	0.719
NZ_CP049258_5	5.10|4654545|31|NZ_CP049258|CRISPRCasFinder,CRT	4654545-4654575	31	NC_007950	Polaromonas sp. JS666 plasmid 2, complete sequence	304551-304581	9	0.71
NZ_CP049258_5	5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT	4654605-4654636	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	362193-362224	9	0.719
NZ_CP049258_5	5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT	4654605-4654636	32	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	317945-317976	9	0.719
NZ_CP049258_5	5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT	4654605-4654636	32	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	333920-333951	9	0.719
NZ_CP049258_5	5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT	4654605-4654636	32	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	380228-380259	9	0.719
NZ_CP049258_5	5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT	4654605-4654636	32	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	391620-391651	9	0.719
NZ_CP049258_5	5.12|4654666|32|NZ_CP049258|CRISPRCasFinder,CRT	4654666-4654697	32	NZ_AP021845	Azospira sp. I09 plasmid pAZI09, complete sequence	397288-397319	9	0.719
NZ_CP049258_5	5.14|4654788|32|NZ_CP049258|CRISPRCasFinder,CRT	4654788-4654819	32	NZ_CP014682	Kozakia baliensis strain NBRC 16680 plasmid pKB16680_1, complete sequence	75931-75962	9	0.719
NZ_CP049258_5	5.14|4654788|32|NZ_CP049258|CRISPRCasFinder,CRT	4654788-4654819	32	MN234180	Arthrobacter phage Shiba, complete genome	40428-40459	9	0.719
NZ_CP049258_5	5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT	4655019-4655050	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	2243003-2243034	9	0.719
NZ_CP049258_5	5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT	4655019-4655050	32	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1480289-1480320	9	0.719
NZ_CP049258_5	5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT	4655019-4655050	32	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	1296503-1296534	9	0.719
NZ_CP049258_5	5.30|4655751|32|NZ_CP049258|CRISPRCasFinder,CRT	4655751-4655782	32	NZ_CP038620	Arsenophonus nasoniae strain FIN plasmid pArsFIN8, complete sequence	27896-27927	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	NZ_CP045400	Halomonas sp. THAF12 plasmid pTHAF12_a, complete sequence	76479-76510	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	NZ_CP032320	Hymenobacter oligotrophus strain sh-6 plasmid unnamed3, complete sequence	11061-11092	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK112554	Mycobacterium phage TinyTim, complete genome	142295-142326	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MH779502	Mycobacterium phage FudgeTart, complete genome	142411-142442	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK112549	Mycobacterium phage Morizzled23, complete genome	141575-141606	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK359347	Mycobacterium phage Ading, complete genome	144605-144636	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MN428065	Mycobacterium phage Cactojaque, complete genome	141450-141481	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	KX721255	Mycobacterium phage Yucca, complete genome	143854-143885	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK359366	Mycobacterium phage Basquiat, complete genome	140727-140758	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK359361	Mycobacterium phage Darko, complete genome	142445-142476	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MH779498	Mycobacterium phage Bread, complete genome	142271-142302	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MT818423	Mycobacterium phage Janiyra, complete genome	143097-143128	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	KX721256	Mycobacterium phage Erdmann, complete genome	143321-143352	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	KM881426	Mycobacterium phage ZygoTaiga	144151-144182	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK359318	Mycobacterium phage Specks, complete genome	143316-143347	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	KF024734	Mycobacterium phage Shrimp, complete genome	143976-144007	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK112533	Mycobacterium phage Bonray, complete genome	144304-144335	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK359327	Mycobacterium phage EmToTheThree, complete genome	143353-143384	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK359336	Mycobacterium phage Chargie21, complete genome	140727-140758	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MN276192	Mycobacterium phage Trinitium, complete genome	141049-141080	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK359349	Mycobacterium phage FoxtrotP1, complete genome	143907-143938	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MH727558	Mycobacterium phage Salacia, complete genome	144365-144396	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK878897	Mycobacterium phage Blackbrain, complete genome	142504-142535	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	KT365400	Mycobacterium phage ErnieJ, complete genome	140149-140180	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	KC691257	Mycobacterium phage Astraea, complete genome	141812-141843	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	KC748968	Mycobacterium phage Gizmo, complete genome	145238-145269	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MN428066	Mycobacterium phage JPickles, complete genome	141560-141591	9	0.719
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	MK359305	Mycobacterium phage Teardrop, complete genome	142328-142359	9	0.719
NZ_CP049258_5	5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT	4655873-4655904	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1940139-1940170	9	0.719
NZ_CP049258_5	5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT	4655873-4655904	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1146446-1146477	9	0.719
NZ_CP049258_5	5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT	4655873-4655904	32	NZ_AP018921	Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence	221471-221502	9	0.719
NZ_CP049258_5	5.34|4655995|32|NZ_CP049258|CRISPRCasFinder,CRT	4655995-4656026	32	MG945617	UNVERIFIED: Microviridae sp. isolate 5105-1801, complete genome	3521-3552	9	0.719
NZ_CP049258_5	5.35|4656056|32|NZ_CP049258|CRISPRCasFinder,CRT	4656056-4656087	32	NZ_CP046475	Janibacter melonis strain M714 plasmid unnamed, complete sequence	30860-30891	9	0.719
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1807424-1807455	9	0.719
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_AP022338	Mameliella alba strain KU6B plasmid pKUB257, complete sequence	20235-20266	9	0.719
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	192022-192053	9	0.719
NZ_CP049258_5	5.38|4656239|32|NZ_CP049258|CRISPRCasFinder,CRT	4656239-4656270	32	NZ_CP011450	Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence	198032-198063	9	0.719
NZ_CP049258_5	5.38|4656239|32|NZ_CP049258|CRISPRCasFinder,CRT	4656239-4656270	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	312683-312714	9	0.719
NZ_CP049258_5	5.38|4656239|32|NZ_CP049258|CRISPRCasFinder,CRT	4656239-4656270	32	JX100810	Caulobacter phage CcrColossus, complete genome	11218-11249	9	0.719
NZ_CP049258_5	5.39|4656300|32|NZ_CP049258|CRISPRCasFinder,CRT	4656300-4656331	32	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	481103-481134	9	0.719
NZ_CP049258_5	5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT	4656361-4656392	32	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	41333-41364	9	0.719
NZ_CP049258_5	5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT	4656361-4656392	32	KY555145	Caulobacter phage Ccr29, complete genome	15972-16003	9	0.719
NZ_CP049258_5	5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT	4656361-4656392	32	KY555143	Caulobacter phage Ccr2, complete genome	13805-13836	9	0.719
NZ_CP049258_5	5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT	4656361-4656392	32	KY555142	Caulobacter phage Ccr10, complete genome	13330-13361	9	0.719
NZ_CP049258_3	3.5|2023506|33|NZ_CP049258|PILER-CR,CRT	2023506-2023538	33	KX752698	Mycobacterium phage Tonenili, complete genome	46936-46968	10	0.697
NZ_CP049258_3	3.9|2023750|33|NZ_CP049258|PILER-CR,CRT	2023750-2023782	33	NZ_CP043850	Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence	20572-20604	10	0.697
NZ_CP049258_3	3.9|2023750|33|NZ_CP049258|PILER-CR,CRT	2023750-2023782	33	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	738180-738212	10	0.697
NZ_CP049258_3	3.15|2023505|34|NZ_CP049258|CRISPRCasFinder	2023505-2023538	34	KX752698	Mycobacterium phage Tonenili, complete genome	46935-46968	10	0.706
NZ_CP049258_3	3.17|2023627|34|NZ_CP049258|CRISPRCasFinder	2023627-2023660	34	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	668588-668621	10	0.706
NZ_CP049258_3	3.19|2023749|34|NZ_CP049258|CRISPRCasFinder	2023749-2023782	34	NZ_CP043850	Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence	20571-20604	10	0.706
NZ_CP049258_3	3.22|2023872|32|NZ_CP049258|CRT	2023872-2023903	32	NC_015724	Cupriavidus necator N-1 plasmid pBB2, complete sequence	46292-46323	10	0.688
NZ_CP049258_5	5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT	4654605-4654636	32	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	271158-271189	10	0.688
NZ_CP049258_5	5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT	4654605-4654636	32	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	440067-440098	10	0.688
NZ_CP049258_5	5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT	4654605-4654636	32	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	65284-65315	10	0.688
NZ_CP049258_5	5.12|4654666|32|NZ_CP049258|CRISPRCasFinder,CRT	4654666-4654697	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1446387-1446418	10	0.688
NZ_CP049258_5	5.20|4655141|32|NZ_CP049258|CRISPRCasFinder,CRT	4655141-4655172	32	MK305890	Streptomyces phage WheeHeim, complete genome	13433-13464	10	0.688
NZ_CP049258_5	5.21|4655202|32|NZ_CP049258|CRISPRCasFinder,CRT	4655202-4655233	32	MN693938	Marine virus AFVG_250M86, complete genome	40841-40872	10	0.688
NZ_CP049258_5	5.23|4655324|32|NZ_CP049258|CRISPRCasFinder,CRT	4655324-4655355	32	AY722806	Thermoproteus tenax spherical virus 1, complete genome	8983-9014	10	0.688
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	NZ_CP021128	Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence	8598-8629	10	0.688
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	CP007645	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence	8598-8629	10	0.688
NZ_CP049258_5	5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT	4655873-4655904	32	NZ_CP026547	Cupriavidus metallidurans strain Ni-2 plasmid unnamed3	19907-19938	10	0.688
NZ_CP049258_5	5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT	4656117-4656148	32	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	638702-638733	10	0.688
NZ_CP049258_5	5.39|4656300|32|NZ_CP049258|CRISPRCasFinder,CRT	4656300-4656331	32	NZ_CP040760	Paracoccus sp. 2251 plasmid unnamed6, complete sequence	10862-10893	10	0.688
NZ_CP049258_5	5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT	4656361-4656392	32	MG757154	Streptomyces phage Bing, complete genome	40038-40069	10	0.688
NZ_CP049258_5	5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT	4656483-4656514	32	NZ_CP013756	Lactobacillus plantarum strain DF plasmid unnamed3, complete sequence	32923-32954	10	0.688
NZ_CP049258_5	5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT	4656483-4656514	32	NZ_CP013752	Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence	12601-12632	10	0.688
NZ_CP049258_5	5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT	4656483-4656514	32	NZ_CP013752	Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence	60677-60708	10	0.688
NZ_CP049258_5	5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT	4656483-4656514	32	NZ_CP023177	Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2C, complete sequence	23034-23065	10	0.688
NZ_CP049258_5	5.47|4656788|32|NZ_CP049258|CRISPRCasFinder,CRT,PILER-CR	4656788-4656819	32	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	13431-13462	10	0.688
NZ_CP049258_3	3.19|2023749|34|NZ_CP049258|CRISPRCasFinder	2023749-2023782	34	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	738180-738213	11	0.676
NZ_CP049258_5	5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT	4655812-4655843	32	NZ_CP006991	Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence	8592-8623	11	0.656
NZ_CP049258_5	5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT	4656361-4656392	32	MN694313	Marine virus AFVG_250M1015, complete genome	12828-12859	11	0.656

1. spacer 1.1|1444529|26|NZ_CP049258|CRISPRCasFinder matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 4, identity: 0.846

tcaacagcggcggcgcacccgatggc	CRISPR spacer
acgacagcgccggcgaacccgatggc	Protospacer
 *.****** ***** **********

2. spacer 1.1|1444529|26|NZ_CP049258|CRISPRCasFinder matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 4, identity: 0.846

tcaacagcggcggcgcacccgatggc	CRISPR spacer
gccaccgcggcggcgcacacgatggc	Protospacer
 * ** ************ *******

3. spacer 5.4|4654179|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MN862068 (Brevundimonas phage vB_BsubS-Delta, complete genome) position: , mismatch: 4, identity: 0.875

cgctcccacttcttcgttacgctgttgacgcc	CRISPR spacer
cgctcccacttcttcgtgacgctgttcacttc	Protospacer
***************** ******** ** .*

4. spacer 1.1|1444529|26|NZ_CP049258|CRISPRCasFinder matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

tcaacagcggcggcgcacccgatggc	CRISPR spacer
aggacagcgccagcgcacccgatggc	Protospacer
  .****** *.**************

5. spacer 5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MT178448 (Vibrio phage vB_VpP_FE11, complete genome) position: , mismatch: 5, identity: 0.844

tgctcgatgtcggtctgcatcgaataacgctc-	CRISPR spacer
cgctcgatgtcggtctggaacgaat-acgcttt	Protospacer
.**************** * ***** *****. 

6. spacer 5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT matches to LR794124 (Vibrio phage vB_Vc_SrVc9 genome assembly, chromosome: 1) position: , mismatch: 5, identity: 0.844

tgctcgatgtcggtctgcatcgaataacgctc-	CRISPR spacer
cgctcgatgtcggtctggaacgaat-acgcttt	Protospacer
.**************** * ***** *****. 

7. spacer 5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MT501516 (Vibrio phage vB_VpaP_MGD1, complete genome) position: , mismatch: 5, identity: 0.844

tgctcgatgtcggtctgcatcgaataacgctc-	CRISPR spacer
cgctcgatgtcggtctggaacgaat-acgcttt	Protospacer
.**************** * ***** *****. 

8. spacer 5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_048035 (Vibrio phage vB_VpaP_KF1, complete genome) position: , mismatch: 5, identity: 0.844

tgctcgatgtcggtctgcatcgaataacgctc-	CRISPR spacer
cgctcgatgtcggtctggaacgaat-acgcttt	Protospacer
.**************** * ***** *****. 

9. spacer 5.7|4654362|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_012662 (Vibrio phage VP93, complete genome) position: , mismatch: 5, identity: 0.844

tgctcgatgtcggtctgcatcgaataacgctc-	CRISPR spacer
cgctcgatgtcggtctggaacgaat-acgcttt	Protospacer
.**************** * ***** *****. 

10. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KF626665 (Phage Sano, complete genome) position: , mismatch: 5, identity: 0.844

ccgagcttgcccagctcgttttcat-cgttgat	CRISPR spacer
cccagcttgcccagctcgtcttcgtacgtcga-	Protospacer
** ****************.***.* ***.** 

11. spacer 3.5|2023506|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 6, identity: 0.818

-gtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
catggcctc-catcatcgagaaggaaaccggcca	Protospacer
 .*. **** *****.********* ********

12. spacer 3.5|2023506|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

-gtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
catggcctc-catcatcgagaaggaaaccggcca	Protospacer
 .*. **** *****.********* ********

13. spacer 3.15|2023505|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 6, identity: 0.824

-cgtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
ccatggcctc-catcatcgagaaggaaaccggcca	Protospacer
 *.*. **** *****.********* ********

14. spacer 3.15|2023505|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.824

-cgtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
ccatggcctc-catcatcgagaaggaaaccggcca	Protospacer
 *.*. **** *****.********* ********

15. spacer 5.38|4656239|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

taccggttggacgccgccgcctgcctctctgc	CRISPR spacer
tgcagtctggacgccgccgcctgccccgctgc	Protospacer
*.* * .******************.* ****

16. spacer 3.1|2023262|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP045549 (Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

cgacctcgagctgttcgaagtggagcgccacgc-	CRISPR spacer
cgaactcgagctgttcgacgtgga-cggtgggcg	Protospacer
*** ************** ***** ** .. ** 

17. spacer 3.5|2023506|33|NZ_CP049258|PILER-CR,CRT matches to NC_011758 (Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence) position: , mismatch: 7, identity: 0.788

gtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
ccttcctcacatcaccgagacggacgccgccga	Protospacer
 . ***************** ****.*** * *

18. spacer 3.5|2023506|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP035710 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence) position: , mismatch: 7, identity: 0.788

gtatcctca-catcaccgagaaggacaccggcca	CRISPR spacer
-caccaccagcatcaccgagaagggcaccgacca	Protospacer
 .*.* .** **************.*****.***

19. spacer 3.15|2023505|34|NZ_CP049258|CRISPRCasFinder matches to NC_011758 (Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence) position: , mismatch: 7, identity: 0.794

cgtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
cccttcctcacatcaccgagacggacgccgccga	Protospacer
* . ***************** ****.*** * *

20. spacer 3.15|2023505|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP035710 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence) position: , mismatch: 7, identity: 0.794

cgtatcctca-catcaccgagaaggacaccggcca	CRISPR spacer
-gcaccaccagcatcaccgagaagggcaccgacca	Protospacer
 *.*.* .** **************.*****.***

21. spacer 3.22|2023872|32|NZ_CP049258|CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 7, identity: 0.781

----aacatggaacggcatcaatgtggtctgcatct	CRISPR spacer
ccataatat----cggcatcaatgtgttcttcatct	Protospacer
    **.**    ************* *** *****

22. spacer 5.8|4654423|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 7, identity: 0.781

acagtccggtgggcttgctgcccggctggaag	CRISPR spacer
ccatgtcggtgggcatgatgcccggctggacg	Protospacer
 **  .******** ** ************ *

23. spacer 5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MN694427 (Marine virus AFVG_250M959, complete genome) position: , mismatch: 7, identity: 0.781

gaggtgcg----caggatcaagtccttcacagggag	CRISPR spacer
----tgcgctaacaggatcaagtactttacagggaa	Protospacer
    ****    *********** ***.*******.

24. spacer 5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MN693923 (Marine virus AFVG_250M958, complete genome) position: , mismatch: 7, identity: 0.781

gaggtgcg----caggatcaagtccttcacagggag	CRISPR spacer
----tgcgctaacaggatcaagtactttacagggaa	Protospacer
    ****    *********** ***.*******.

25. spacer 5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP008954 (Amycolatopsis japonica strain DSM 44213 plasmid pAmyja1, complete sequence) position: , mismatch: 7, identity: 0.781

acctcgatcggcgtcggcgcaaa---gctctctgg	CRISPR spacer
acctcgatcagcttcggcgcaaaagggctgta---	Protospacer
*********.** **********   *** *    

26. spacer 5.35|4656056|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_027348 (Delftia phage RG-2014, complete genome) position: , mismatch: 7, identity: 0.781

gtgaagcgcttgtgcagcccagccaggtcttc	CRISPR spacer
acgaagcgcttgtacagccgagccaggccggc	Protospacer
..***********.***** *******.*  *

27. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

atgtcggcgatgcgctgcacctgagc---gaactt	CRISPR spacer
tcgtcggcgatgcgctccacccgagccctgaa---	Protospacer
 .************** ****.****   ***   

28. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to CP000663 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence) position: , mismatch: 7, identity: 0.781

atgtcggcgatgcgctgcacctgagcgaactt	CRISPR spacer
atgtccgcgacgcgctgcacctgggggtgcgt	Protospacer
***** ****.************.* * .* *

29. spacer 5.39|4656300|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP044049 (Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gctggacggcggttcgtccgcgcgatcaagag	CRISPR spacer
tctggacggcggattgtccgcgcgagggagat	Protospacer
 *********** *.**********  .*** 

30. spacer 5.49|4655999|28|NZ_CP049258|PILER-CR matches to MG945617 (UNVERIFIED: Microviridae sp. isolate 5105-1801, complete genome) position: , mismatch: 7, identity: 0.75

caacggcaattcgtcgaatacctgcgcc	CRISPR spacer
agtaggcaattcgtcgaatttctgcgct	Protospacer
 .  *************** .******.

31. spacer 3.3|2023384|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 8, identity: 0.758

gtcgcc--cgatctcgacagccgcattgccgacgt	CRISPR spacer
--catcaacgatctcgacacccgcattgccgagaa	Protospacer
  *..*  *********** ************ . 

32. spacer 3.3|2023384|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 8, identity: 0.758

gtcgcc--cgatctcgacagccgcattgccgacgt	CRISPR spacer
--catcaacgatctcgacacccgcattgccgagaa	Protospacer
  *..*  *********** ************ . 

33. spacer 3.9|2023750|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.758

catggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
catggtgcggatcggcggcgagcgcctcgcctt	Protospacer
********  *************** * . * .

34. spacer 3.9|2023750|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 8, identity: 0.758

catggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
catggtgcggatcggcggcgagcgcctcgcctt	Protospacer
********  *************** * . * .

35. spacer 3.11|2023261|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP045549 (Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ccgacctcgagctgttcgaagtggagcgccacgc-	CRISPR spacer
tcgaactcgagctgttcgacgtgga-cggtgggcg	Protospacer
.*** ************** ***** ** .. ** 

36. spacer 3.11|2023261|34|NZ_CP049258|CRISPRCasFinder matches to MK962635 (Achromobacter phage vB_AxyS_19-32_Axy18, complete genome) position: , mismatch: 8, identity: 0.765

ccgacctcgagctgttcgaagtggagcgccacgc	CRISPR spacer
ccgacttcgagctgttcgaaggggtacttcgcgg	Protospacer
*****.*************** ** .* .*.** 

37. spacer 3.11|2023261|34|NZ_CP049258|CRISPRCasFinder matches to NC_029033 (Achromobacter phage phiAxp-1, complete genome) position: , mismatch: 8, identity: 0.765

ccgacctcgagctgttcgaagtggagcgccacgc	CRISPR spacer
ccgacttcgagctgttcgaaggggtacttcgcgg	Protospacer
*****.*************** ** .* .*.** 

38. spacer 3.11|2023261|34|NZ_CP049258|CRISPRCasFinder matches to MK962636 (Achromobacter phage vB_AxyS_19-32_Axy19, complete genome) position: , mismatch: 8, identity: 0.765

ccgacctcgagctgttcgaagtggagcgccacgc	CRISPR spacer
ccgacttcgagctgttcgaaggggtacttcgcgg	Protospacer
*****.*************** ** .* .*.** 

39. spacer 3.11|2023261|34|NZ_CP049258|CRISPRCasFinder matches to MK962637 (Achromobacter phage vB_AxyS_19-32_Axy20, complete genome) position: , mismatch: 8, identity: 0.765

ccgacctcgagctgttcgaagtggagcgccacgc	CRISPR spacer
ccgacttcgagctgttcgaaggggtacttcgcgg	Protospacer
*****.*************** ** .* .*.** 

40. spacer 3.13|2023383|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 8, identity: 0.765

-cgtcgcccgatctcgacagccgcattgccgacgt	CRISPR spacer
gcatca-acgatctcgacacccgcattgccgagaa	Protospacer
 *.**.  *********** ************ . 

41. spacer 3.13|2023383|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 8, identity: 0.765

-cgtcgcccgatctcgacagccgcattgccgacgt	CRISPR spacer
gcatca-acgatctcgacacccgcattgccgagaa	Protospacer
 *.**.  *********** ************ . 

42. spacer 3.22|2023872|32|NZ_CP049258|CRT matches to NZ_CP033222 (Parasedimentitalea marina strain W43 plasmid pW43C, complete sequence) position: , mismatch: 8, identity: 0.75

aacatggaacggcatcaatgtggtctgcatct	CRISPR spacer
aacatggaacggcatcagggtgggccggaagg	Protospacer
*****************. **** *.* *   

43. spacer 5.1|4653998|30|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.733

gtgttccaagtgaaggtcctgccgcgcttg	CRISPR spacer
ggccagcaagtgaaaggcctgccgcgcttc	Protospacer
*  .  ********.* ************ 

44. spacer 5.2|4654057|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK059749 (Mycobacterium phage CRB2, complete genome) position: , mismatch: 8, identity: 0.75

tcgttgatctcggcccgagcctccatgaccat	CRISPR spacer
gggttgatctcggccagcgcctccatgtcggc	Protospacer
  ************* * ********* * ..

45. spacer 5.2|4654057|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP029835 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

tcgttgatctcggcccgagcctccatgaccat	CRISPR spacer
gtattgatctcggcccgcgcatccatcaggat	Protospacer
 ..************** ** ***** *  **

46. spacer 5.2|4654057|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MT711978 (Streptomyces phage Endor1, complete genome) position: , mismatch: 8, identity: 0.75

tcgttgatctcggcccgagcctccatgaccat	CRISPR spacer
tcgatgagctcggcccgagcctcacgctcgat	Protospacer
*** *** ***************     * **

47. spacer 5.10|4654545|31|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP024200 (Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence) position: , mismatch: 8, identity: 0.742

tcaatcgcgcgccgatcgacagcgttcagac	CRISPR spacer
cagatcgtgcgccgatcgacagctttgaaat	Protospacer
. .****.*************** ** *.*.

48. spacer 5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 8, identity: 0.75

tcatcgccgagatcattttcatggaggcgagc	CRISPR spacer
ccatcgccgagatcatgttcatggacttcgtc	Protospacer
.*************** ********  . . *

49. spacer 5.12|4654666|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_042036 (Mycobacterium phage Rockstar, complete genome) position: , mismatch: 8, identity: 0.75

tacgcacagcacaacgccaccgatgcctggtg	CRISPR spacer
cgcgcccagcacaacgccaccgatggtggcgg	Protospacer
..*** ******************* . *  *

50. spacer 5.13|4654727|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP023312 (Vibrio anguillarum strain VIB12 isolate Sea bass plasmid p292, complete sequence) position: , mismatch: 8, identity: 0.75

gttcaccatagtcatttcgttttcgaggatca	CRISPR spacer
gaacaccatagtcatttcggttttgagctact	Protospacer
*  **************** ***.***   * 

51. spacer 5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 8, identity: 0.75

gaggtgcgcaggatcaagtccttcacagggag	CRISPR spacer
caggtgcccaggatcaactccttcacctcggc	Protospacer
 ****** ********* ********   *. 

52. spacer 5.28|4655630|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP035471 (Escherichia coli strain U12A plasmid pU12A_D, complete sequence) position: , mismatch: 8, identity: 0.75

gcagaacagcctaagcgctcatggagtgatat	CRISPR spacer
ccagaacagccttcgcgctcatggtcatatag	Protospacer
 ***********  **********    *** 

53. spacer 5.28|4655630|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KX863569 (Uncultured bacterium plasmid pTRE-131 clone TRE-131, complete sequence) position: , mismatch: 8, identity: 0.75

gcagaacagcctaagcgctcatggagtgatat	CRISPR spacer
ccagaacagccttcgcgctcatggtcatatag	Protospacer
 ***********  **********    *** 

54. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KX833905 (Lactococcus phage PLg-TB25, complete genome) position: , mismatch: 8, identity: 0.75

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
aagagcttgaccagctctttttcattattagt	Protospacer
  ******* ******* *******..**..*

55. spacer 5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 8, identity: 0.75

acctcgatcggcgtcggcgcaaagctctctgg	CRISPR spacer
tccttgatcggcgtcggcgaaaagcgatatat	Protospacer
 ***.************** *****  * *. 

56. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt	CRISPR spacer
agctcggcgatgccctgcacctgagctcgccc	Protospacer
*  ********** ************  .*..

57. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt	CRISPR spacer
tgatcggcgatgccctgcacctgatcgaccag	Protospacer
  .********** ********** *** *  

58. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

59. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

60. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

61. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

62. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

63. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

64. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

65. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

66. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

67. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

68. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

69. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

70. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

71. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

72. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

73. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

74. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

75. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcggcgatgcgctgcacctgagcgaactt---	CRISPR spacer
tcgtcggcgatgcgctccacccgagc---cctgag	Protospacer
 .************** ****.****   *.*   

76. spacer 5.39|4656300|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 8, identity: 0.75

gctggacggcggttcgtccgcgcgatcaagag	CRISPR spacer
cctggacggcggtttgtccgcgcggctcggtg	Protospacer
 *************.*********... .* *

77. spacer 5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

attttcgacatcttcacgggccaggaaataaa	CRISPR spacer
aacttcgacatcttcaccggccacgaagtggt	Protospacer
* .************** ***** ***.*.. 

78. spacer 5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 8, identity: 0.75

atatcgggaatatcttcgcttgttgctttctg	CRISPR spacer
ggaccaggaatatcttcgcctgttgcatttag	Protospacer
. *.*.*************.****** **. *

79. spacer 5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_014723 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH02, complete sequence) position: , mismatch: 8, identity: 0.75

atatcgggaatatcttcgcttgttgctttctg	CRISPR spacer
ggaccaggaatatcttcgcctgttgcatttag	Protospacer
. *.*.*************.****** **. *

80. spacer 5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KR131710 (Fusobacterium phage Funu1, complete genome) position: , mismatch: 8, identity: 0.75

atatcgggaatatcttcgcttgttgctttctg	CRISPR spacer
aaaactggaatatcttcacttgatgctttaaa	Protospacer
* * * ***********.**** ******  .

81. spacer 3.3|2023384|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.727

gtcgcc--cgatctcgacagccgcattgccgacgt	CRISPR spacer
--catcaacgatctcgatacccgcattgccgaaaa	Protospacer
  *..*  *********.* ************ . 

82. spacer 3.3|2023384|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.727

gtcgcc--cgatctcgacagccgcattgccgacgt	CRISPR spacer
--catcaacgatctcgatacccgcattgccgagaa	Protospacer
  *..*  *********.* ************ . 

83. spacer 3.5|2023506|33|NZ_CP049258|PILER-CR,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.727

gtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
ggcccctcacatcaccgcgaacgacaccgtgtg	Protospacer
*  .************* *** *******  ..

84. spacer 3.11|2023261|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP029986 (Sphingomonas sp. FARSPH plasmid p01, complete sequence) position: , mismatch: 9, identity: 0.735

ccgacctcgagctgttcgaagtggagcgccacgc	CRISPR spacer
ccaacctcgagctgttcgacgtggagtatgagct	Protospacer
**.**************** ******... *  .

85. spacer 3.11|2023261|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP044073 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

ccgacctcgagctgttcgaagtggagcgccacgc	CRISPR spacer
ccgtcctcgagctgttcgaaggggtgatggaggt	Protospacer
*** ***************** ** *    * *.

86. spacer 3.13|2023383|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.735

-cgtcgcccgatctcgacagccgcattgccgacgt	CRISPR spacer
gcatca-acgatctcgatacccgcattgccgaaaa	Protospacer
 *.**.  *********.* ************ . 

87. spacer 3.13|2023383|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.735

-cgtcgcccgatctcgacagccgcattgccgacgt	CRISPR spacer
gcatca-acgatctcgatacccgcattgccgagaa	Protospacer
 *.**.  *********.* ************ . 

88. spacer 3.15|2023505|34|NZ_CP049258|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.735

cgtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
cggcccctcacatcaccgcgaacgacaccgtgtg	Protospacer
**  .************* *** *******  ..

89. spacer 3.19|2023749|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.735

ccatggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
acatggtgcggatcggcggcgagcgcctcgcctt	Protospacer
 ********  *************** * . * .

90. spacer 3.19|2023749|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 9, identity: 0.735

ccatggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
acatggtgcggatcggcggcgagcgcctcgcctt	Protospacer
 ********  *************** * . * .

91. spacer 3.19|2023749|34|NZ_CP049258|CRISPRCasFinder matches to MN369753 (Gordonia phage Sukkupi, complete genome) position: , mismatch: 9, identity: 0.735

ccatggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
ccgtggtgcccctcggcggcgagctggacaacct	Protospacer
**.******** ************  .  *** .

92. spacer 3.19|2023749|34|NZ_CP049258|CRISPRCasFinder matches to MK376960 (Gordonia phage BiPauneto, complete genome) position: , mismatch: 9, identity: 0.735

ccatggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
ccgtggtgcccctcggcggcgagctggacaacct	Protospacer
**.******** ************  .  *** .

93. spacer 3.19|2023749|34|NZ_CP049258|CRISPRCasFinder matches to MN369766 (Gordonia phage Yndexa, complete genome) position: , mismatch: 9, identity: 0.735

ccatggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
ccgtggtgcccctcggcggcgagctggacaacct	Protospacer
**.******** ************  .  *** .

94. spacer 5.8|4654423|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

acagtccggtgggcttgctgcccggctggaag	CRISPR spacer
tttgcgcggtgggcttgccgcccgcctgggcg	Protospacer
 . *. ************.***** ****. *

95. spacer 5.8|4654423|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

acagtccggtgggcttgctgcccggctggaag	CRISPR spacer
ccggtccggtcggcttgctgctcggcaccgaa	Protospacer
 *.******* **********.****   .*.

96. spacer 5.8|4654423|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.719

acagtccggtgggcttgctgcccggctggaag	CRISPR spacer
tttgcgcggtgggcttgccgcccgcctgggcg	Protospacer
 . *. ************.***** ****. *

97. spacer 5.9|4654484|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 9, identity: 0.719

tcttcgaggtccgtcatacgctgctcgtaggc	CRISPR spacer
cgttcgaggtccatcatgcgctgctcgattcg	Protospacer
. **********.****.*********     

98. spacer 5.10|4654545|31|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_007950 (Polaromonas sp. JS666 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.71

tcaatcgcgcgccgatcgacagcgttcagac	CRISPR spacer
gcaatcgcgcgccgatccacggcggaaaact	Protospacer
 **************** **.***   *. .

99. spacer 5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 9, identity: 0.719

tcatcgccgagatcattttcatggaggcgagc	CRISPR spacer
agggcgccgacatcattttcatggaggccccg	Protospacer
  . ****** *****************    

100. spacer 5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

tcatcgccgagatcattttcatggaggcgagc	CRISPR spacer
agggcgccgacatcattttcatggaggctccg	Protospacer
  . ****** *****************    

101. spacer 5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

tcatcgccgagatcattttcatggaggcgagc	CRISPR spacer
agggcgccgacatcattttcatggaggctccg	Protospacer
  . ****** *****************    

102. spacer 5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

tcatcgccgagatcattttcatggaggcgagc	CRISPR spacer
agggcgccgacatcattttcatggaggctccg	Protospacer
  . ****** *****************    

103. spacer 5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

tcatcgccgagatcattttcatggaggcgagc	CRISPR spacer
agggcgccgacatcatcttcatggaggccccc	Protospacer
  . ****** *****.***********   *

104. spacer 5.12|4654666|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_AP021845 (Azospira sp. I09 plasmid pAZI09, complete sequence) position: , mismatch: 9, identity: 0.719

tacgcacagcacaacgccaccgatgcctggtg	CRISPR spacer
aatgcacagaacaacgccaccaatgcgtttga	Protospacer
 *.****** ***********.**** *   .

105. spacer 5.14|4654788|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP014682 (Kozakia baliensis strain NBRC 16680 plasmid pKB16680_1, complete sequence) position: , mismatch: 9, identity: 0.719

cgaagcatggcgatgtaatcctctgtgccaag	CRISPR spacer
ttatggatggcgatgtaatcctcggggcctcc	Protospacer
. * * ***************** * ***   

106. spacer 5.14|4654788|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MN234180 (Arthrobacter phage Shiba, complete genome) position: , mismatch: 9, identity: 0.719

cgaagcatggcgatgtaatcctctgtgccaag	CRISPR spacer
gatggcgtggcgatgtaatcctctttgaccaa	Protospacer
 . .**.***************** ** * *.

107. spacer 5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.719

gaggtgcgcaggatcaagtccttcacagggag	CRISPR spacer
ccggtgcgcaggatcacgtcctacaagggacc	Protospacer
  ************** ***** ** .**.  

108. spacer 5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 9, identity: 0.719

gaggtgcgcaggatcaagtccttcacagggag	CRISPR spacer
ccggtgcgcaggatcaggtcctacaggggcgc	Protospacer
  **************.***** ** .** . 

109. spacer 5.18|4655019|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 9, identity: 0.719

gaggtgcgcaggatcaagtccttcacagggag	CRISPR spacer
ccggtgcgcaggatcaggtcctacaggggcgc	Protospacer
  **************.***** ** .** . 

110. spacer 5.30|4655751|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP038620 (Arsenophonus nasoniae strain FIN plasmid pArsFIN8, complete sequence) position: , mismatch: 9, identity: 0.719

acgctggatagtggcctggacaggctgggtaa	CRISPR spacer
atgctggaaagtggcatggacaggcaatctgt	Protospacer
*.****** ****** ********* .  *. 

111. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP045400 (Halomonas sp. THAF12 plasmid pTHAF12_a, complete sequence) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
tgacccttgcccagctcgctatcatcgttagt	Protospacer
. .  *************.* ********..*

112. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP032320 (Hymenobacter oligotrophus strain sh-6 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
ccgagtttgcccagctccttttctggcatggg	Protospacer
*****.*********** *****     **. 

113. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK112554 (Mycobacterium phage TinyTim, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

114. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MH779502 (Mycobacterium phage FudgeTart, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

115. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK112549 (Mycobacterium phage Morizzled23, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

116. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK359347 (Mycobacterium phage Ading, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

117. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MN428065 (Mycobacterium phage Cactojaque, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

118. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KX721255 (Mycobacterium phage Yucca, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

119. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK359366 (Mycobacterium phage Basquiat, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

120. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK359361 (Mycobacterium phage Darko, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

121. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MH779498 (Mycobacterium phage Bread, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

122. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MT818423 (Mycobacterium phage Janiyra, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

123. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KX721256 (Mycobacterium phage Erdmann, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

124. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KM881426 (Mycobacterium phage ZygoTaiga) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

125. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK359318 (Mycobacterium phage Specks, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

126. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KF024734 (Mycobacterium phage Shrimp, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

127. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK112533 (Mycobacterium phage Bonray, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

128. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK359327 (Mycobacterium phage EmToTheThree, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

129. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK359336 (Mycobacterium phage Chargie21, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

130. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MN276192 (Mycobacterium phage Trinitium, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

131. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK359349 (Mycobacterium phage FoxtrotP1, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

132. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MH727558 (Mycobacterium phage Salacia, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

133. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK878897 (Mycobacterium phage Blackbrain, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

134. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KT365400 (Mycobacterium phage ErnieJ, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

135. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KC691257 (Mycobacterium phage Astraea, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

136. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KC748968 (Mycobacterium phage Gizmo, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

137. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MN428066 (Mycobacterium phage JPickles, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

138. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK359305 (Mycobacterium phage Teardrop, complete genome) position: , mismatch: 9, identity: 0.719

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
acgagcttgtccagctcgttctcagaatgagt	Protospacer
 ********.**********.***  .* ..*

139. spacer 5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

acctcgatcggcgtcggcgcaaagctctctgg	CRISPR spacer
ggctcgaccggcttcggcgcaaagccgccgcg	Protospacer
. *****.**** ************. .*  *

140. spacer 5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

acctcgatcggcgtcggcgcaaagctctctgg	CRISPR spacer
ggctcgaccggcttcggcgcaaagccgccgcg	Protospacer
. *****.**** ************. .*  *

141. spacer 5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_AP018921 (Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence) position: , mismatch: 9, identity: 0.719

acctcgatcggcgtcggcgcaaagctctctgg	CRISPR spacer
ggcgcgatcggcgtcggcgccgagctcggtcc	Protospacer
. * **************** .*****  *  

142. spacer 5.34|4655995|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MG945617 (UNVERIFIED: Microviridae sp. isolate 5105-1801, complete genome) position: , mismatch: 9, identity: 0.719

gtgcaacggcaattcgtcgaatacctgcgcca	CRISPR spacer
cagagtaggcaattcgtcgaatttctgcgcta	Protospacer
  * .  *************** .******.*

143. spacer 5.35|4656056|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP046475 (Janibacter melonis strain M714 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtgaagcgcttgtgcagcccagccaggtcttc	CRISPR spacer
tcagggcgctggtccagcccagccaggtcgta	Protospacer
 ....***** ** *************** * 

144. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

atgtcggcgatgcgctgcacctgagcgaactt	CRISPR spacer
ccggcgtcgacgcgctgcacctgagcgatgaa	Protospacer
 .* ** ***.*****************    

145. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_AP022338 (Mameliella alba strain KU6B plasmid pKUB257, complete sequence) position: , mismatch: 9, identity: 0.719

atgtcggcgatgcgctgcacctgagcgaactt	CRISPR spacer
atgtcggcgaggcgctggacctgggaatcggt	Protospacer
********** ****** *****.* .    *

146. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

atgtcggcgatgcgctgcacctgagcgaactt	CRISPR spacer
cgggcggcgatgcccagcacctgagcgcgttc	Protospacer
  * ********* * *********** ..*.

147. spacer 5.38|4656239|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP011450 (Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence) position: , mismatch: 9, identity: 0.719

taccggttggacgccgccgcctgcctctctgc	CRISPR spacer
taccggttgcacgctgccgcctgcagcctgct	Protospacer
********* ****.*********  *..  .

148. spacer 5.38|4656239|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 9, identity: 0.719

taccggttggacgccgccgcctgcctctctgc	CRISPR spacer
ggccggttcgacgccgccgcccgcctgcccct	Protospacer
 .****** ************.**** .*. .

149. spacer 5.38|4656239|32|NZ_CP049258|CRISPRCasFinder,CRT matches to JX100810 (Caulobacter phage CcrColossus, complete genome) position: , mismatch: 9, identity: 0.719

taccggttggacgccgccgcctgcctctctgc	CRISPR spacer
gccaaggcggacgccgccgcccgcctcgctga	Protospacer
  * .* .*************.***** *** 

150. spacer 5.39|4656300|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 9, identity: 0.719

gctggacggcggttcgtccgcgcgatcaagag	CRISPR spacer
tctggacggcagttcgtccgggcgaagtttgg	Protospacer
 *********.********* ****     .*

151. spacer 5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 9, identity: 0.719

attttcgacatcttcacgggccaggaaataaa	CRISPR spacer
attttcgacgtcttcaccggccagcccgccga	Protospacer
*********.******* ******   .. .*

152. spacer 5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KY555145 (Caulobacter phage Ccr29, complete genome) position: , mismatch: 9, identity: 0.719

attttcgacatcttcacgggccaggaaataaa	CRISPR spacer
atccaagacatcgtcacgggccaggagatcgg	Protospacer
**..  ****** *************.** ..

153. spacer 5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KY555143 (Caulobacter phage Ccr2, complete genome) position: , mismatch: 9, identity: 0.719

attttcgacatcttcacgggccaggaaataaa	CRISPR spacer
atccaagacatcgtcacgggccaggagatcgg	Protospacer
**..  ****** *************.** ..

154. spacer 5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT matches to KY555142 (Caulobacter phage Ccr10, complete genome) position: , mismatch: 9, identity: 0.719

attttcgacatcttcacgggccaggaaataaa	CRISPR spacer
atccaagacatcgtcacgggccaggagatcgg	Protospacer
**..  ****** *************.** ..

155. spacer 3.5|2023506|33|NZ_CP049258|PILER-CR,CRT matches to KX752698 (Mycobacterium phage Tonenili, complete genome) position: , mismatch: 10, identity: 0.697

gtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
cgacgacgtcatcaccgagaaggacatcgtcca	Protospacer
  *.  .  *****************.** ***

156. spacer 3.9|2023750|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP043850 (Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

catggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
gaaccggcccaccggcggcgagcccatgaagtg	Protospacer
 *    *****.*********** ******   

157. spacer 3.9|2023750|33|NZ_CP049258|PILER-CR,CRT matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 10, identity: 0.697

catggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
agcgatgcccatcggcggcgatcgcacgaggca	Protospacer
 ..*.**************** ****.**.   

158. spacer 3.15|2023505|34|NZ_CP049258|CRISPRCasFinder matches to KX752698 (Mycobacterium phage Tonenili, complete genome) position: , mismatch: 10, identity: 0.706

cgtatcctcacatcaccgagaaggacaccggcca	CRISPR spacer
ccgacgacgtcatcaccgagaaggacatcgtcca	Protospacer
*  *.  .  *****************.** ***

159. spacer 3.17|2023627|34|NZ_CP049258|CRISPRCasFinder matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 10, identity: 0.706

ccggcgacgacggggtgcggacctatgacggctc	CRISPR spacer
ccggcgacggcggggtgctgacctggcgcgagct	Protospacer
*********.******** *****.  .**. ..

160. spacer 3.19|2023749|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP043850 (Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

ccatggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
cgaaccggcccaccggcggcgagcccatgaagtg	Protospacer
* *    *****.*********** ******   

161. spacer 3.22|2023872|32|NZ_CP049258|CRT matches to NC_015724 (Cupriavidus necator N-1 plasmid pBB2, complete sequence) position: , mismatch: 10, identity: 0.688

aacatggaacggcatcaatgtggtctgcatct	CRISPR spacer
gggctggaacgtcatcaaggtggtctggggca	Protospacer
..  ******* ****** ******** . * 

162. spacer 5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.688

tcatcgccgagatcattttcatggaggcgagc	CRISPR spacer
agggcgccgacatcatcttcatggaggctccg	Protospacer
  . ****** *****.***********    

163. spacer 5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 10, identity: 0.688

tcatcgccgagatcattttcatggaggcgagc	CRISPR spacer
agggcgccgacatcatcttcatggaggctccg	Protospacer
  . ****** *****.***********    

164. spacer 5.11|4654605|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 10, identity: 0.688

tcatcgccgagatcattttcatggaggcgagc	CRISPR spacer
ccatcgccgagaacatcttcatgggctccgag	Protospacer
.*********** ***.*******.  * .. 

165. spacer 5.12|4654666|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tacgcacagcacaacgccaccgatgcctggtg	CRISPR spacer
caatgccagcgcaaggccaccgatgcctgcac	Protospacer
.*    ****.*** **************   

166. spacer 5.20|4655141|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MK305890 (Streptomyces phage WheeHeim, complete genome) position: , mismatch: 10, identity: 0.688

gaacgcatccttgggattgtgggccttgccat	CRISPR spacer
aattacatccttgggattgtatgccttgattc	Protospacer
.* ..***************. ****** . .

167. spacer 5.21|4655202|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MN693938 (Marine virus AFVG_250M86, complete genome) position: , mismatch: 10, identity: 0.688

atgtcccccgctcctcgcctccacgagaacga	CRISPR spacer
cgatctcctgctcctcgcctccacgaggggct	Protospacer
  .**.**.******************..   

168. spacer 5.23|4655324|32|NZ_CP049258|CRISPRCasFinder,CRT matches to AY722806 (Thermoproteus tenax spherical virus 1, complete genome) position: , mismatch: 10, identity: 0.688

gacaatccatgtctatagtgacgttgaaattt	CRISPR spacer
ttccgtccatgtctatagtggcgtagaaccca	Protospacer
  * .***************.*** *** .. 

169. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP021128 (Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence) position: , mismatch: 10, identity: 0.688

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
agccgcatgcccaactcgttttcatcgcggcg	Protospacer
    ** ******.*************. *  

170. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to CP007645 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence) position: , mismatch: 10, identity: 0.688

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
agccgcatgcccaactcgttttcatcgcggcg	Protospacer
    ** ******.*************. *  

171. spacer 5.32|4655873|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP026547 (Cupriavidus metallidurans strain Ni-2 plasmid unnamed3) position: , mismatch: 10, identity: 0.688

acctcgatcggcgtcggcgcaaagctctctgg	CRISPR spacer
acctcgatcgcagtcggcgcaaaaactgcgcc	Protospacer
**********  ***********. .. *   

172. spacer 5.36|4656117|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atgtcggcgatgcgctgcacctgagcgaactt	CRISPR spacer
ccagcggcgacgcgctgcacctgaccggagcc	Protospacer
 .. ******.************* **.* ..

173. spacer 5.39|4656300|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP040760 (Paracoccus sp. 2251 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.688

gctggacggcggttcgtccgcgcgatcaagag	CRISPR spacer
ttcacccggcggttcgtccgcgtgaccaaaac	Protospacer
 ...  ****************.**.***.* 

174. spacer 5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MG757154 (Streptomyces phage Bing, complete genome) position: , mismatch: 10, identity: 0.688

attttcgacatcttcacgggccaggaaataaa	CRISPR spacer
cacttcgacatcttcaaggggcaggactacac	Protospacer
  .************* *** *****    * 

175. spacer 5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP013756 (Lactobacillus plantarum strain DF plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

atatcgggaatatcttcgcttgttgctttctg	CRISPR spacer
ttatcgggaaaatcttcgtttgttcaaataaa	Protospacer
 ********* *******.*****    *  .

176. spacer 5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP013752 (Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

atatcgggaatatcttcgcttgttgctttctg	CRISPR spacer
ttatcgggaaaatcttcgtttgttcaaataaa	Protospacer
 ********* *******.*****    *  .

177. spacer 5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP013752 (Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

atatcgggaatatcttcgcttgttgctttctg	CRISPR spacer
ttatcgggaaaatcttcgtttgttcaaataaa	Protospacer
 ********* *******.*****    *  .

178. spacer 5.42|4656483|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP023177 (Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2C, complete sequence) position: , mismatch: 10, identity: 0.688

atatcgggaatatcttcgcttgttgctttctg	CRISPR spacer
ttatcgggaaaatcttcgtttgttcaaataaa	Protospacer
 ********* *******.*****    *  .

179. spacer 5.47|4656788|32|NZ_CP049258|CRISPRCasFinder,CRT,PILER-CR matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 10, identity: 0.688

acctgccatgacacggtgaagcagaaggaaga	CRISPR spacer
ttccgccatgagacggtgaagcaggagtggtt	Protospacer
 .*.******* ************.** ..  

180. spacer 3.19|2023749|34|NZ_CP049258|CRISPRCasFinder matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 11, identity: 0.676

ccatggtgcccatcggcggcgagcgcatgaacac	CRISPR spacer
gagcgatgcccatcggcggcgatcgcacgaggca	Protospacer
  ..*.**************** ****.**.   

181. spacer 5.31|4655812|32|NZ_CP049258|CRISPRCasFinder,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 11, identity: 0.656

ccgagcttgcccagctcgttttcatcgttgat	CRISPR spacer
agccgcatgcccaactcgttttcatcgcgacg	Protospacer
    ** ******.*************. .  

182. spacer 5.40|4656361|32|NZ_CP049258|CRISPRCasFinder,CRT matches to MN694313 (Marine virus AFVG_250M1015, complete genome) position: , mismatch: 11, identity: 0.656

attttcgacatcttcacgggccaggaaataaa	CRISPR spacer
cacatcgacttcttcaagggccaggaagagct	Protospacer
  . ***** ****** **********. .  

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	5962360 : 5971687	11	uncultured_Mediterranean_phage(77.78%)	tRNA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP049258|5962360:5971687|DBSCAN-SWA
GATGACCAGCGAAGAGAACACGACCGAAACCAAATGGCCGGACGGAGAAGGCCCGGTCCGCCAGGAGGCTGCGCAGGAGCCCGATAATGAGGAGACCCTCATCATCGACATCCTGGGCTACGAAGGCCCTATGGACTTGCTGCTGGAACTGGCTCGCCAGCACAAGATCGATCTTTCCCAGATCTCCATGCTGGCGCTGGTCGAGCAGTATCTGGCTTTCATCGAGCAGGCGCGCCAGCGCCGGCTCGAAATCGCGGCCGACTATCTGGTAATGGCGGCGTGGCTCGCCTATCTCAAATCGCGTCTGTTGCTGCCGCGCGCACCCGGCGATGAGGAAGTGCCGGCCGAAGATCTTGCCGCCCAGCTCTCTTTCCGTCTGCAGAAGCTGCAGGCGATGCGCGAAGCCGCGGCGAAGCTCATGGCGCGTGATCGCCTGGGCCGCGACGTGTTCGAGCGCGGCGATCCGGAGAAGCTCGTCTTCGATACCAGGGTCGAATATACCGACAATCTGATCGACCTGCTGAAGGCCTATACGACACGGCGTCAGAAGCTGGCGCGCCACAATACCTACACGATCAAGCGCATAAAGGCCTGGTCGATCAAGGATGCGCGCCAGATCCTCGAGCGCCTCGTCGGCCGCATGGACAATTGGAACAGCCTCGACAGCTGGCTCGCCGATTATTTCTCGACGCCGGAAGGCCGGGCGACGGTCGTCGCATCGAGCTTCACCGCGAGCCTCGAACTCGCCCGCGAAGGGGTGATCGAAATCAGGCAGGAACGGGCCTTCGAGCCTATTTACATGCGTCGGCGCGCCAGCGCCGCGTGAGAAGGAAATGGAAGTCATGACAAGGCCACAGGCAATTGCGAATGATGTCGAGACCGATGAGGCCTTGGCGACCGATGAGGCCTTGGTGACCGACGAAGCCTTGGCGACCGACGAAGCCGTGGCGAGTGATGAACCGGTAGCGACCGATGAGCTAGTGGCTGAAGAGCCCATGCCGGAGATGAGCGATGTCGTGACAATGCATCCGCGCGCCGATCGCAGCCATCATCTGCGGATCGTCGAGGCGCTGCTGTTCGCTGCGTCCGAGCCTCTGTCCACGGAACAATTGGGCGCCGCCTTGCCGGAAGGCGCCGATCTGCCGTCTCTGCTCGAGGATCTGCAGGCAAACTATGCCAATCGCGGTGTCAACCTCGTCCAGGTTTCAGGGCGCTGGGCGCTGCGCACAGCGAGCGACTTGAGTTTCCTGTTGCGCCGCGAGGCTGTCGAACAGAAGCGCCTGTCCAAGGCGGCGCTCGAGACGCTTGCGATCATCGCCTATCATCAGCCGGTGACGCGCGCCGAGATCGAAGAGATCCGCGGTGTCGCCATTTCCAAAGGCACGCTCGACACGCTGCTCGAAATCGGCTGGACACGCATGCGTGGCCGCCGCCGCACCCCGGGACGACCCGTCACCTATGGCACCGCGCCGGCATTCCTTGCCCATTTCGGCCTGAACGAGATTGCCGACCTGCCGGGCCTGCAGGAGCTGCGCGGCGCCGGCCTGCTCGACACCACCATGCCGCCCGGCTTCGACATGCCGGTGCCCAGGATGTCCGACGAACTGACCCCGGATGAGGATCCGCTCGACGGCACCGAGGAGACACCGCTCGAAATGCATCTGCCTGAGGAGAACGAGGTCATGGCGGACGCTGAGGAGGTCATGACCGAGACTCTCGAGGCCGAGCTTGAGGAGAGCGGGCAGGGGGATGATGCGGGGGCCGATGAGCCCAAGCCGGAAGAGCCCAATTCCTGACCGCCAGAGATCACGATGAGTTTGGATTGAGTCAATCCAAACTCATGAACGTGGTCGATTCTTGAATGTCAGCGCGGGATTCCTGCGAAAGTCTGGTGCCCACTTTTTGCATTCTGCGCGGGTTGGCCGTCTTTGCCGATCGCCGGGGGATAGTGTACACCGCCCCCCATGGAAATGGCAGAACTCACCACCGGCACGACGCGGCCGCATGACTGGGGCCCACGCGGTACGGCCGCCGCGACTTTCGCCGGACGCCTCACTTTTGAAGATGTGAGTCTGAGCTACGGGCCTGTCCCAGCCGTGCGCAACGTCAGCTTCGATCTGTCGCCCGGGGAGATCGTCTGTCTTCTGGGCCCGTCCGGTTGCGGCAAGACGACGCTGCTGCGCATCGCGGCGGGCATCGAGCGCCCGGAAAGCGGCCGCGTCCTCATCGACGGTCTGGAGATGGCGGGCGCCGGCCGGTTCGTGCCGCCGGAAAAGCGAAACATCGGACTGATGTTCCAGGATTTTGCGCTTTTCCCGCATATGTCGATCATCGACAATGTAGCTTTCGGCCTGCGTGGTCTCAAGCGCGCCGACGCGCTGAAGGAAGCGCGCCTGGCCCTGAAGCGCGTAGGGCTAGAGGAATACGAACGCGAATATCCCCATCGCCTGTCGGGGGGCGAGCAGCAGCGCGTTGCCCTGGCACGGGCCATCGTGCCGCGCCCGCAGGTGATGCTCATGGATGAGCCTTTTTCGGGGCTGGACCAGCGCCTGCGCGACAATGTCCGCGCCGAGACCCTGGCTCTGCTCAAGGAGACGCGCGCCACCGCAATGCTGGTGACGCACGACCCGACAGAGGCTCTCGGGCTGGCTGACCGCATTTTGCTCATGCGCCGCGGCCGCCTCATCCAGACCGGCACGCCGACCGAAATCTATGGCCGCCCCGCCGATGCCGAGGCGGCGCGCTTCTTCTGCGACATGAACGAGCTGACGGGACGGGTGCGCGGCGGCCTGGCCGAGACGCCTCTCGGAACATTTCCTGCTCCCGGGCGCACCGATGGCGAGGCGGTACTGGTCATGCTGCGCCCGCAGGCATTTTCGCTGGCCCCCTCCGACATCGGTCCCGAGGGGTTCGTGCTGAGTTCCCGCTTCATTGGCGATGCCAATGCCTTGTCCGTCATATTCAAGGGGCTGGAGGCGCCGCTCGCCATCCGCATGCCAGCATCGCTTGCTCCGCGCCAGGGCGTAAGCGCGACTTTTACCATTGATCCGGCGCAGGTTTTGGTCTTTACGGCCAATGGTTCCACCCCCATCTAAGACCATATGCGCGTTACGGGCAGTTTTGTTGCGGCGCTGACCCCTTTCTGCAATAGTGCGCGCGACGCGGGCTGGGAAAGCCCTGAATAAGTTCAAGGGAGTAGCAGTAAATGGGTTCGCTTTCGATTTGGCACTGGCTTCTGGTGATCCTGGTGGTCGTGCTCCTGTTCGGCCGCGGCAAGATCTCCGATCTGATGGGCGACGTCGCCAAGGGCATCAAGAGCTTCAAGAAGGGAATGGCCGACGACACGACCGAAGCCAATGCGGATGCCGACAAGACCAAGTCGCTCGAGCAGTCGGCCGAGACCAAGGTCGGCGACAAGGTCCAGAGCTGAGCTGAGGCGCGGCCCGCTGCTTACGGGGCCGGAGAGCCATAATGTTTGACTTCGGCATCGGCTATACCGAACTGATGGTGATCGCCTTGGTAGCGATCATCGTCATAGGCCCAAAGGACCTCCCCAAGGTGCTGCGCGCTTTTGGGCGCACCATGCAGAAGGTGCGCGGCATGGCGCGTGAGTTCCAGGGCCATCTCGACGAGGCGATGCGCGAGGCGGGCGTCGACGAAATCAAGAAAGAGATCAACAATCTCAAGACCATGAATCCGGTCGAGGATATCAAGAAGGAGATCAATTCGATCTCCGCGTCGAATCCGATTCCTCAGGTGGCCAAGGAACTCTCCGCCGATCTCAAGAAGCAGGAAGACGACTTCAAGACGTATTTCGGTGATAACGGCGCCAAGCCCACTGAGCCGCCAGCTGCCGCAGCTGCCGAATCGGTGAAGGCCGAGCCCACGGCGACCGCGCCCAAAACCGAAACACCGCCGACGGTGCACTGATGAGCCAGGCCGATATCGACGCCACCGAAGCCCCGCTGATCGAGCACCTGATCGAGCTGCGCCGCCGGCTGATCTATATCGTGATCGGCTTTGCCATCGCCTTCATCGGAAGCTTTGCCTTCTCGACCCAGATTTTCGAGATTCTTATTCTCCCCTTCAAATGGGGAACGGGCATCGGCACTGATATCCAGCTCATCACCATCAAGCTGCTCGGCTTCTTCCTGGTGAAACTGAAGATCGCGTTCTTCGGAGCGATGTTCATTACTTTCCCGCTGATCGCCATCCAGATCTACCGTTTCGTGGCCCCCGGCCTCTATAACAACGAGCGCAACGCGTTTCGGCCTTACCTGATCGCGACGCCGATATTCTTCGTGCTGGGCGCCTGTCTGGTATTCTTCTTCCTGCTGCCGGTTGCCATCAAGTTCTTCTACAGTCTGGTTGAAGGTACCGGCGTGTCGCTCATGCCCGACGTCGAGGCCTATCTCGACTTCGTGATGATGCTGGTCCTGGCTTTCGGACTGTGCTTCCAGCTACCTGTGATCCTGACGCTCCTGGGGCAGATCGGTGTGCTCTCCTATGAGCAGCTGAGGAGTGGTCGGAAATTCGCCATCGTCGGTGTCTTCGTCGTGGCCGCCGTCCTGACCCCGCCGGATCCCATCTCGCAGATCGCCATGGCGGTGCCGCTGATGGGCCTCTACGAGGTATCGGTGCAGGCGGTGCGCTTCCTTGAGCGGCGCCGCGCCGCCGCCGCCGCCAAGGCGGAAGCAGAAGAGGCCAAATCCGGCTAAGCCTGTCCTTAAATTCTTAAGACATGAGTTGTGAGTCGTGAGGCTTTGCCTCGGGCGCCGGGCGCTTTATAGCATCCGGCGACCATAGGAATCGCCATGCACGACATTAAACTCATCCGTGACAACCCGCAGGCCTTCGACAAGGGGCTCGCCAAGCGTGGCCTGCCGGTCCAGTCGGCAAGCCTCATCGCCCAAGATGATACGCGCCGCGCTTTGATCGCCAAGCTGCAGGCCCTTCAGGAACGCCGCAATGCGGCGTCCAAGGAGATCGGCCAGGCCATGGGCAAGGGCGAGAAGGCCAGGGCCGAGGAGCTCAAGGCCGAGGTCGCCCGCATCAAGGAGAGCATGCCTGGGGAGGAGGAGGCTCTGAAAGCCGCCGAAGCCTCCTTGCATGAGACGCTCGCCGCCATTCCCAATATCCCGGGAGATGACGTGCCGGTCGGACCCGACGAGACGGCCAATGTCGAGATCCGCAGGAGCGGCACGCCCAGCGGGCTCAACAGCGCCAAGCAGCATTTCGAGCTCGGCGAGGCCTTGGGTCTCATGGATTTCGAGACGGCGGCGAAGATTTCCGGCGCCCGTTTCGTGGTGTTGAAGGGTGCGTTGGCGCGGCTCGAGCGGGCGCTTGGCAGCTTCATGGTCGATCTGCACACAAGCGAGCATGGCTATACCGAAGTGGCGCCGCCACTGATCGTGCGCGACGAGAGCATGTTCGGCACCGCACAGCTGCCGAAATTCGTCGATGACCAGTTCCACACCACAGACGGTCGGTGGCTTATCCCGACAGCCGAGGTCTCGCTCACCAATCTTGTGCGCGAATCGGTACTCGAAGAGGAAGCTCTGCCGCTGCGCGTCACGGCCTGGACGCCGTGCTTCCGCGCCGAAGCGGGTGCGGCCGGCCGCGACACGCGCGGCATGATCCGCCAGCACCAGTTCGCCAAGGTCGAGCTCGTCTCGATCACCACGCCGGAACAATCTGGCGATGAGCATGAGCGCATGACGAAATGCGCCGAGGAGGTGCTGAAGCGCCTCGATCTGCCGTTCCGCACCCTCACGCTGTCGACCGGCGACATGGGCTTCTCGGCCCGCAAGACCTACGACATCGAAGTGTGGCTACCGGGCCAGAACGCCTATCGTGAAATCTCGTCCTGCTCTGTTTGCGGAGACTTCCAAGCGCGCCGCATGGACGCCCGCTTCAGACCAAAGGAAGGCAAGGGGCCCCGTTTCGTCCATACGCTCAATGGTTCGGGCGTGGCGGTCGGGCGCGCCCTCATCGCGGTGCTGGAGAACTACCAGAATGCCGATGGCAGCGTGACGATCCCCGACGTGCTGCGCCCCTATATGAATAACGAAACGACGATCAAGGCCCGATGATGCGCATTCTGCTGACCAATGACGACGGCATCCATGCCGAGGGCCTCGAGTCGCTCGAAAGGATCGCGCGCGCGATTTCCGATGACATCTGGATCGTGGCGCCGGAATCCGAACAATCGGGAGCATCGCATTCGCTGTCACTGTCCGATCCCCTGCGCCTGCGCAAGATCGGCGAGCGGCGCTTCGCGGTGCTCGGCACCCCGACCGACTGCGTGCTGATGGCAGCCCGCAAGGTGATGCCGGAAGCGCCCGATCTGGTGCTCTCGGGCGTCAATCGCGGCCAGAACATCGCTGATGACGTGACCTATTCGGGCACTATCGCCGCGGCGATGGAGGGCACGACCCTCGGCATCAAATCCTTTGCGCTGTCGCAGGTCATCGGCATTCACAACCGCGACGCCCTCACTTATGAGGTTGCCGAAAAGCACGGCGCCGCGGTGCTGAAACAGCTCGTCGACCTGCCTTTGGGCCCCGGTGTGCTGCTCAATATCAATTTTCCCGATTGCCGGCCGGACGAAGTGGCGGGCGTCGAGGTGACGCGGCAAGGCAAGCGCGACCAGAATTTGCTGCATATCGATGAACGCAGGGATACGCGCGGAAAGCCCTATTACTGGCTGGGCTTCCAGCGCGAGCGCGGCAATCCGCCGGCCGGGACCGATCTCAGGGCCGTCTTCGAGAAGCGCATCTCGGTGACGCCGCTGCATATGAATCTCACACAGCTTGACGCCTTCGAGCCTTTGCGAAAGGCGCTGGAGAAAATGTGAACGAGGACTATCGCAAGATCGAGCTGATCATGGCCCTGCGCAATCAGGGCATCCGTGATCGGGCGATTCTGGAAGCGATAGAGCGCACCCCGCGCGAAATGTTCTTGGGGCCGGTTTTCCAGCCCATGGCCTATTCTGACCAGGCGCTGCCCATCGCCTGCGGCCAGACGATCAGTCAGCCTTTTGTCGTTGCTTTCATGACCGATCGGCTGAAGCTCAATAAGCGCTGCAAGGTGCTGGAGATCGGCACCGGCTCGGGATATCAGGCGGCGATCCTGTCTCCCCTTTGCCGGCGGGTCTATACAATGGAGCGCTATCGGACATTGGCATTGGAAGCCGGCGAGCGTTTCAAGCAGCTGGGCCTTGGCAATATCACGCAGATGGTGGGCGACGGCTACAAGGGGTGGCCGAACCAGTCCCCCTTCGACCGCATCATCGTTACGGCGGCGGCCAAGGAAGTGCCGGAGGCGCTGGCCGACCAGCTTGCGGTGGGCGGAATCATGATCATCCCCCTCGAAGACACGTCGATGAATCAGGATCTTGTCCGCATCACGCGAAGCGAGAAGGGCTACGCCTATGAGACTTTGCTCCCGGTGCGTTTCGTGCCGCTGGTCGAAGGTGTTGCGCGGGAAAGCTAGAGGATCGGACCGAAAAGTGCGAAGCGGTTTTCGGAGAATCCGATGCGCAAATCAAAGAGATAGAGCGCCGGGGTGATTCCATGGGAACGCCCGGCACACTAGCACGAGTTCGCATTCTGGTATTGAATGGGACATCAGCAGGATGGCGCAACATTATGAAGGGGCATGAATGCGCAAGGATCAGGGATTTCCACGCGGCATCGTCCACCGGCTGACGATCGACAGCAGCGTTCTGAAGGACAACCTTCTGGGCGATCCGACCGAGCGGATCATCGATGTCTATGTGCCGGCTGGAACGACGGGTGAGGGGCTGCCGCTGCTCGTCGACCTAGTTGGCTTCACGGCGGGTGGCCCGGCCCATACCAATTGGAAGAACTTCGGCGAGAACCTGCCCGAACGGCTCGATCGTCTGATCGCAGAGGGCGCCATGCCGCCCTGCGTCGTGGCGCTGCCTGACTGTTTCACCAAGCTCGGCGGCAATCAGTATATCAATTCGGTGGTGATGGGACGCTGGGACGATTTCCTCCTACAGGAGGCTGTGCCCCATGTGGAAATGAAATTCGGCTGCGGTGGAACGGGAAAGCGGGGATGTTTCGGCAAGAGCTCGGGTGGCTATGGCAGCATGGTGCAGGCCATGCTGCATCCCGATTTCTGGAGCGCCGCCGCCTCGCATTCAGGCGATGTCGGATTCGAGCTCCTCTTCATTCCCGACTATCCGAAGATCCTGCGCGCTCTGGCGAGCACGGAAAACTCGATCCAGAAGTGGCTGGAGAAATTCTTCGCGGCGCCGAAGGTCAAGGATGCCGATGTCCATATCCTGATGGACCTCGCGATGGCCGCGACCTACGATCCCGATCCCGGCGCCTATATGGGTGTGCGCCTTCCGGTGACGATGGACACCTGCGAACTCATCCCGGAGCGTTGGGCCAACTACGTCAAATGGGACCCGTTGACCCTGGTCGAGACGCATGGCGAAGGGCTGAAGAAGCTCAAGGCGTTTTATATCGATTGCGGCGATATCGACCAGTTCAATCTCCTCTATGGCTCGCGGCGCATGCACAGGCGTCTGACCGAGATGCAGGTGCCGCATGTCTATGAGGAGTTTGCCGACGATCATACCGCCGTCGACTACCGGATGGATATGAGCCTGCCGATTCTGGCGAAGGCGCTTACCAGCGCATGATCCGGAAAAGTGGAGGCCGGTTTTCCGAAAAGATCATGCGCCAGACCTTGCGTGGTTTTCGGGTGGTATGACGGGCAGGAGGGGCTAGGTTTCAGCGATGAGCACCGTTATCCTCACTGACCATATCGAGACGCCCATCGGACCCATGCTGCTGATGGTCCGGGAGAACCGCATCATCGGACTCGAATTCGACGATCAGCCCGAGTGGTACCTGAAGGACCTCCGCCACCGCTTCAGCGAATTCGAGTTCAGGGAGACGCCGAATCCTTGCGGCTTCTCGGATCCCTGCGCGCCTATTATGCGGGGGATATCGGCGCCGTCGACGAGCTCGCCACCGAAGGCGGCGGCACGCCGTTCCAGGAGCGCGTCTGGGCCGAGCTTCGGCGCATCCCGGTGGGTACCACGATCTCCTATGGCGAGCTGGCGGTCAGGCTCGGCGACAAGAAGGCGACGCGCGCCGTCGGCCTCGCCAATGGCCGCAATCCGATCTCAGTGGTCGTGCCGTGCCACCGCGTGATCGGCGCGGATGGCTCGCTGACCGGCTATGGCGGCGGCGTGCCGCGCAAGAAGTGGCTGCTGGCGCATGAGGGTGTGGTGCTTCGGGAGTCCTGTGCAGCCCGGCAAGCCGATCTGTTTTCGGGTGGCAATTAG

Protein sequences of DBSCAN-SWA_1

>NZ_CP049258|5962360:5971687|5968450_5969215_+|WP_165174300.1|DBSCAN-SWA
MRILLTNDDGIHAEGLESLERIARAISDDIWIVAPESEQSGASHSLSLSDPLRLRKIGERRFAVLGTPTDCVLMAARKVMPEAPDLVLSGVNRGQNIADDVTYSGTIAAAMEGTTLGIKSFALSQVIGIHNRDALTYEVAEKHGAAVLKQLVDLPLGPGVLLNINFPDCRPDEVAGVEVTRQGKRDQNLLHIDERRDTRGKPYYWLGFQRERGNPPAGTDLRAVFEKRISVTPLHMNLTQLDAFEPLRKALEKM
>NZ_CP049258|5962360:5971687|5971222_5971687_+|WP_165174301.1|DBSCAN-SWA
MRRSARVVPEGPPPPLQRIRVQGDAESLRLLGSLRAYYAGDIGAVDELATEGGGTPFQERVWAELRRIPVGTTISYGELAVRLGDKKATRAVGLANGRNPISVVVPCHRVIGADGSLTGYGGGVPRKKWLLAHEGVVLRESCAARQADLFSGGN
>NZ_CP049258|5962360:5971687|5969211_5969853_+|WP_165171569.1|DBSCAN-SWA
MNEDYRKIELIMALRNQGIRDRAILEAIERTPREMFLGPVFQPMAYSDQALPIACGQTISQPFVVAFMTDRLKLNKRCKVLEIGTGSGYQAAILSPLCRRVYTMERYRTLALEAGERFKQLGLGNITQMVGDGYKGWPNQSPFDRIIVTAAAKEVPEALADQLAVGGIMIIPLEDTSMNQDLVRITRSEKGYAYETLLPVRFVPLVEGVARES
>NZ_CP049258|5962360:5971687|5965564_5965789_+|WP_165171561.1|DBSCAN-SWA
MGSLSIWHWLLVILVVVLLFGRGKISDLMGDVAKGIKSFKKGMADDTTEANADADKTKSLEQSAETKVGDKVQS
>NZ_CP049258|5962360:5971687|5966288_5967077_+|WP_165171565.1|DBSCAN-SWA
MSQADIDATEAPLIEHLIELRRRLIYIVIGFAIAFIGSFAFSTQIFEILILPFKWGTGIGTDIQLITIKLLGFFLVKLKIAFFGAMFITFPLIAIQIYRFVAPGLYNNERNAFRPYLIATPIFFVLGACLVFFFLLPVAIKFFYSLVEGTGVSLMPDVEAYLDFVMMLVLAFGLCFQLPVILTLLGQIGVLSYEQLRSGRKFAIVGVFVVAAVLTPPDPISQIAMAVPLMGLYEVSVQAVRFLERRRAAAAAKAEAEEAKSG
>NZ_CP049258|5962360:5971687|5963354_5964155_+|WP_165174298.1|DBSCAN-SWA
MPEMSDVVTMHPRADRSHHLRIVEALLFAASEPLSTEQLGAALPEGADLPSLLEDLQANYANRGVNLVQVSGRWALRTASDLSFLLRREAVEQKRLSKAALETLAIIAYHQPVTRAEIEEIRGVAISKGTLDTLLEIGWTRMRGRRRTPGRPVTYGTAPAFLAHFGLNEIADLPGLQELRGAGLLDTTMPPGFDMPVPRMSDELTPDEDPLDGTEETPLEMHLPEENEVMADAEEVMTETLEAELEESGQGDDAGADEPKPEEPNS
>NZ_CP049258|5962360:5971687|5962360_5963185_+|WP_165171559.1|DBSCAN-SWA
MTSEENTTETKWPDGEGPVRQEAAQEPDNEETLIIDILGYEGPMDLLLELARQHKIDLSQISMLALVEQYLAFIEQARQRRLEIAADYLVMAAWLAYLKSRLLLPRAPGDEEVPAEDLAAQLSFRLQKLQAMREAAAKLMARDRLGRDVFERGDPEKLVFDTRVEYTDNLIDLLKAYTTRRQKLARHNTYTIKRIKAWSIKDARQILERLVGRMDNWNSLDSWLADYFSTPEGRATVVASSFTASLELAREGVIEIRQERAFEPIYMRRRASAA
>NZ_CP049258|5962360:5971687|5967173_5968451_+|WP_165171567.1|tRNA|DBSCAN-SWA
MHDIKLIRDNPQAFDKGLAKRGLPVQSASLIAQDDTRRALIAKLQALQERRNAASKEIGQAMGKGEKARAEELKAEVARIKESMPGEEEALKAAEASLHETLAAIPNIPGDDVPVGPDETANVEIRRSGTPSGLNSAKQHFELGEALGLMDFETAAKISGARFVVLKGALARLERALGSFMVDLHTSEHGYTEVAPPLIVRDESMFGTAQLPKFVDDQFHTTDGRWLIPTAEVSLTNLVRESVLEEEALPLRVTAWTPCFRAEAGAAGRDTRGMIRQHQFAKVELVSITTPEQSGDEHERMTKCAEEVLKRLDLPFRTLTLSTGDMGFSARKTYDIEVWLPGQNAYREISSCSVCGDFQARRMDARFRPKEGKGPRFVHTLNGSGVAVGRALIAVLENYQNADGSVTIPDVLRPYMNNETTIKAR
>NZ_CP049258|5962360:5971687|5970022_5971036_+|WP_165171571.1|DBSCAN-SWA
MRKDQGFPRGIVHRLTIDSSVLKDNLLGDPTERIIDVYVPAGTTGEGLPLLVDLVGFTAGGPAHTNWKNFGENLPERLDRLIAEGAMPPCVVALPDCFTKLGGNQYINSVVMGRWDDFLLQEAVPHVEMKFGCGGTGKRGCFGKSSGGYGSMVQAMLHPDFWSAAASHSGDVGFELLFIPDYPKILRALASTENSIQKWLEKFFAAPKVKDADVHILMDLAMAATYDPDPGAYMGVRLPVTMDTCELIPERWANYVKWDPLTLVETHGEGLKKLKAFYIDCGDIDQFNLLYGSRRMHRRLTEMQVPHVYEEFADDHTAVDYRMDMSLPILAKALTSA
>NZ_CP049258|5962360:5971687|5964329_5965454_+|WP_165174299.1|DBSCAN-SWA
MAELTTGTTRPHDWGPRGTAAATFAGRLTFEDVSLSYGPVPAVRNVSFDLSPGEIVCLLGPSGCGKTTLLRIAAGIERPESGRVLIDGLEMAGAGRFVPPEKRNIGLMFQDFALFPHMSIIDNVAFGLRGLKRADALKEARLALKRVGLEEYEREYPHRLSGGEQQRVALARAIVPRPQVMLMDEPFSGLDQRLRDNVRAETLALLKETRATAMLVTHDPTEALGLADRILLMRRGRLIQTGTPTEIYGRPADAEAARFFCDMNELTGRVRGGLAETPLGTFPAPGRTDGEAVLVMLRPQAFSLAPSDIGPEGFVLSSRFIGDANALSVIFKGLEAPLAIRMPASLAPRQGVSATFTIDPAQVLVFTANGSTPI
>NZ_CP049258|5962360:5971687|5965830_5966289_+|WP_165171563.1|DBSCAN-SWA
MFDFGIGYTELMVIALVAIIVIGPKDLPKVLRAFGRTMQKVRGMAREFQGHLDEAMREAGVDEIKKEINNLKTMNPVEDIKKEINSISASNPIPQVAKELSADLKKQEDDFKTYFGDNGAKPTEPPAAAAAESVKAEPTATAPKTETPPTVH

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165171559.1|5962360_5963185_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.8e-29	32.0
WP_165174298.1|5963354_5964155_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	3.3e-44	51.2
WP_165174299.1|5964329_5965454_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.7e-11	38.5
WP_165171561.1|5965564_5965789_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	4.7e-09	62.0
WP_165171563.1|5965830_5966289_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_165171565.1|5966288_5967077_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	5.9e-38	38.1
WP_165171567.1|5967173_5968451_+|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-106	49.1
WP_165174300.1|5968450_5969215_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.0e-35	38.3
WP_165171569.1|5969211_5969853_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.2e-33	48.5
WP_165171571.1|5970022_5971036_+	enterochelin esterase	NA	NA	NA	NA
WP_165174301.1|5971222_5971687_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.1e-20	50.5