CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043510	Salmonella enterica subsp. enterica serovar Rissen strain GJ0703-2 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP043509	Salmonella enterica subsp. enterica serovar Rissen strain GJ0703-2 chromosome, complete genome	2 crisprs	csa3,PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	1	26	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043509_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043509_1

1029850-1031281

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

23 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP043509_1

>merge|NZ_CP043509|1|1029850-1031281|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCACGCGGAGGTCTACGGCGAATATATTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGCTGCTTTCCTGAAGAGTGCCCATGCCAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGACTCATTAACTCCCAGTTCATGCCGTGATCACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATCTTCTCTTTTGAAAACCACTGTTGGGATGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGTAACGGGAAATCCAGTGGCGGCAGTATTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCACCGGTGCGGCATACAGTGGGATCAATATGTGTTCCCCGCGCCAGCGGGGATAAACCGACAAGGATATTCTCGTCTACGTTATCCAGTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCGACGCCATCCGGATAGCGCTGTCAGCTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTGCGGCAGAGGGTGTCAACACAGAGGGCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCCGTGAAACGCTAATCGCGCTATTGAGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGTCCACCGGCACGACCTATTCCAACAGCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCCAGTATTTAAAAAGCTGCTGATCGCGATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGATCGACCTCTCCCATGTTGTGCCGGTTACGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGTTTAGTAGCGAGATAGTCAAACGGGAGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTGTCAGCTCGTTATGTGGGGTATAGCGATAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCATCGCGTCAGTGCGTCTGGGTGACGTTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGATCAAACATTGCTCCAGATTGCCACTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTAATTGAGGCAATTAGCGCGGCCGGCATCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATCTACTTCCTGCCGGGTCATAGGGGTACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTAATTCAGAAATTCAGGCAGGGGCAGCGCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTATAACCGACGAGGGCAAACGCCGTGCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTTGCGTCAAGTCCCATTTCATCTGCCTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTAGAATTACGCATTGAGCCGATGATGTAGTGTTCCCCGCGCCAGCGGGGATAGCCGT

>NZ_CP043509|1|1|1029850-1031220|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCACGCGGAGGTCTACGGCGAATATATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCTGCTTTCCTGAAGAGTGCCCATGCCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTCATTAACTCCCAGTTCATGCCGTGATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATCTTCTCTTTTGAAAACCACTGTTGGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGTAACGGGAAATCCAGTGGCGGCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCGGTGCGGCATACAGTGGGATCAATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAGGATATTCTCGTCTACGTTATCCAGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGACGCCATCCGGATAGCGCTGTCAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGCGGCAGAGGGTGTCAACACAGAGGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTGAAACGCTAATCGCGCTATTGAGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCACCGGCACGACCTATTCCAACAGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGTATTTAAAAAGCTGCTGATCGCGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGATCGACCTCTCCCATGTTGTGCCGGTTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTTTAGTAGCGAGATAGTCAAACGGGAGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGTCAGCTCGTTATGTGGGGTATAGCGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCATCGCGTCAGTGCGTCTGGGTGACGTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGATCAAACATTGCTCCAGATTGCCACTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTAATTGAGGCAATTAGCGCGGCCGGCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTACTTCCTGCCGGGTCATAGGGGTACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAATTCAGAAATTCAGGCAGGGGCAGCGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGCGTCAAGTCCCATTTCATCTGCCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP043509|1|1|1029850-1031281|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCACGCGGAGGTCTACGGCGAATATATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCTGCTTTCCTGAAGAGTGCCCATGCCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTCATTAACTCCCAGTTCATGCCGTGATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATCTTCTCTTTTGAAAACCACTGTTGGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGTAACGGGAAATCCAGTGGCGGCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCGGTGCGGCATACAGTGGGATCAATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAGGATATTCTCGTCTACGTTATCCAGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGACGCCATCCGGATAGCGCTGTCAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGCGGCAGAGGGTGTCAACACAGAGGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTGAAACGCTAATCGCGCTATTGAGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCACCGGCACGACCTATTCCAACAGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGTATTTAAAAAGCTGCTGATCGCGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGATCGACCTCTCCCATGTTGTGCCGGTTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTTTAGTAGCGAGATAGTCAAACGGGAGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGTCAGCTCGTTATGTGGGGTATAGCGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCATCGCGTCAGTGCGTCTGGGTGACGTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGATCAAACATTGCTCCAGATTGCCACTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTAATTGAGGCAATTAGCGCGGCCGGCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTACTTCCTGCCGGGTCATAGGGGTACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAATTCAGAAATTCAGGCAGGGGCAGCGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGCGTCAAGTCCCATTTCATCTGCCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTAGAATTACGCATTGAGCCGATGATGTA
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

>NZ_CP043509|1|1|1029850-1031281|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCACGCGGAGGTCTACGGCGAATATATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCTGCTTTCCTGAAGAGTGCCCATGCCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTCATTAACTCCCAGTTCATGCCGTGATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATCTTCTCTTTTGAAAACCACTGTTGGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGTAACGGGAAATCCAGTGGCGGCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCGGTGCGGCATACAGTGGGATCAATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAGGATATTCTCGTCTACGTTATCCAGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGACGCCATCCGGATAGCGCTGTCAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGCGGCAGAGGGTGTCAACACAGAGGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTGAAACGCTAATCGCGCTATTGAGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCACCGGCACGACCTATTCCAACAGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGTATTTAAAAAGCTGCTGATCGCGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGATCGACCTCTCCCATGTTGTGCCGGTTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTTTAGTAGCGAGATAGTCAAACGGGAGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGTCAGCTCGTTATGTGGGGTATAGCGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCATCGCGTCAGTGCGTCTGGGTGACGTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGATCAAACATTGCTCCAGATTGCCACTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTAATTGAGGCAATTAGCGCGGCCGGCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTACTTCCTGCCGGGTCATAGGGGTACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAATTCAGAAATTCAGGCAGGGGCAGCGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGCGTCAAGTCCCATTTCATCTGCCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTAGAATTACGCATTGAGCCGATGATGTA
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043509.1\|WP_001044459.1\|1019941_1020715_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP043509.1\|WP_023137835.1\|1043563_1044124_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP043509.1\|WP_023138788.1\|1018397_1018934_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP043509.1\|WP_050901207.1\|1033051_1034851_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP043509.1\|WP_000832396.1\|1018930_1019401_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP043509.1\|WP_023137836.1\|1044137_1045196_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP043509.1\|WP_075321918.1\|1037459_1038413_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP043509.1\|WP_000210451.1\|1024699_1025500_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP043509.1\|WP_023137833.1\|1038856_1041517_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP043509.1\|WP_001208007.1\|1031378_1032176_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP043509.1\|WP_023137831.1\|1034850_1036563_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP043509.1\|WP_001645986.1\|1036637_1037372_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP043509.1\|WP_000036734.1\|1027447_1028746_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP043509.1\|WP_023137834.1\|1042010_1043567_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP043509.1\|WP_077908638.1\|1020727_1023427_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP043509.1\|WP_000842512.1\|1023506_1024094_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP043509.1\|WP_000210863.1\|1025727_1027365_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP043509.1\|WP_001199961.1\|1028881_1029553_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP043509.1\|WP_000108313.1\|1032265_1032628_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP043509.1\|WP_000178264.1\|1019415_1019922_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178

Protein	Function_ID	Function_description	E-value
NZ_CP043509.1\|WP_001044459.1\|1019941_1020715_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP043509.1\|WP_023137835.1\|1043563_1044124_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	7.18198e-33
NZ_CP043509.1\|WP_023138788.1\|1018397_1018934_-\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	6.55457e-121
NZ_CP043509.1\|WP_050901207.1\|1033051_1034851_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP043509.1\|WP_000832396.1\|1018930_1019401_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
NZ_CP043509.1\|WP_023137836.1\|1044137_1045196_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	9.44331e-132
NZ_CP043509.1\|WP_075321918.1\|1037459_1038413_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP043509.1\|WP_000210451.1\|1024699_1025500_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP043509.1\|WP_023137833.1\|1038856_1041517_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP043509.1\|WP_001208007.1\|1031378_1032176_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.9681e-103
NZ_CP043509.1\|WP_023137831.1\|1034850_1036563_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP043509.1\|WP_001645986.1\|1036637_1037372_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.50033e-138
NZ_CP043509.1\|WP_000036734.1\|1027447_1028746_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP043509.1\|WP_023137834.1\|1042010_1043567_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP043509.1\|WP_077908638.1\|1020727_1023427_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP043509.1\|WP_000842512.1\|1023506_1024094_-\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
NZ_CP043509.1\|WP_000210863.1\|1025727_1027365_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP043509.1\|WP_001199961.1\|1028881_1029553_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP043509.1\|WP_000108313.1\|1032265_1032628_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP043509.1\|WP_000178264.1\|1019415_1019922_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	7.39103e-105

>NZ_CP043509.1|WP_001199961.1|1028881_1029553_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP043509.1|WP_000036734.1|1027447_1028746_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP043509.1|WP_000210863.1|1025727_1027365_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP043509.1|WP_000210451.1|1024699_1025500_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP043509.1|WP_000842512.1|1023506_1024094_-|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP043509.1|WP_077908638.1|1020727_1023427_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDRE
>NZ_CP043509.1|WP_001044459.1|1019941_1020715_-|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP043509.1|WP_000178264.1|1019415_1019922_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTIGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP043509.1|WP_000832396.1|1018930_1019401_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP043509.1|WP_023138788.1|1018397_1018934_-|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATEGTAFVLKEGITTINLQARLQKYAGEDVMPGEFKGTATVSFEYQ
>NZ_CP043509.1|WP_001208007.1|1031378_1032176_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP043509.1|WP_000108313.1|1032265_1032628_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP043509.1|WP_050901207.1|1033051_1034851_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVESYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPEAPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP043509.1|WP_023137831.1|1034850_1036563_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIVEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIESGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP043509.1|WP_001645986.1|1036637_1037372_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP043509.1|WP_075321918.1|1037459_1038413_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSSIKDILNISDDTVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKIFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP043509.1|WP_023137833.1|1038856_1041517_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKTGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEHVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKDEFERLKGESFQQWCVEQHQNKDFAIVIVVTDSAACGYSANEGLTGKME
>NZ_CP043509.1|WP_023137834.1|1042010_1043567_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MFPINLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEPLTGEKVSIASLLPEIPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDVADLPLSDQCDAAVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANKEYPALVVNVFNARRLRDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFTNAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGQKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP043509.1|WP_023137835.1|1043563_1044124_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKAAWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKTPDELLRQLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLSHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP043509.1|WP_023137836.1|1044137_1045196_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKEDLTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGEAGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYVQETAFKDFNVMNQQGSMKDVLDFICA

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Crispr_ID: NZ_CP043509_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043509_2

1047892-1049811

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

31 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP043509_2

>merge|NZ_CP043509|2|1047892-1049811|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGGATGATTTAAACACCCAAACGCTGGGAATAATGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCCTGGACACTGAGACCGGATCTGATTGGGTGTGTTCCCCGCGCCAGCGGGGATAAACCAATTCGACGACTTTCCACTCCTGAGAGTGTGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTAGATGCTTGTATGTGGGTGAGAGAAGAACAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCGCATCAACGATTTGTTGACACATCCAGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCAATTAACTCACACTATTGCGCTGATATACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCTTCATCGACAGCGTGTTGTCGCGGTGCTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGGGATGGAAAAAATGGGAGCCAGTTTTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTATGCCACGAAAGCGGCGCGTTTCTAGCGGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTAGCCTTCAGACACTTTAGCCAGGTTCCCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCGAAAAAAAAGACGACGAACTCGTCACAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTGATATCCGCCTGATTGGTGATCTGCGTCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGCGCAGGTTCGCCTTTCGGGCCTTTGAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAAACGTCTTTTGCTAGGTAGCATTCTATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGCCACCGAGCTATTCGGGCCGCTCGGTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGATTTTATGACGACTGGCCGAAATCGTACAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAATACTCTCCAAAATGAGTCAGTCCGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGAATCCACATCCTGTTTAGCTCCATATAGCCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAATTTCTCCGCGAACGCCCACCAGTCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTTCGCCAGCGGTGCCCGCGATCTGGAGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGTTTTTTTTATCGGTGTGGTTCGGTCGTAAGTGTTCCCCGCGCCAGCGGGGATAAACCTGGCGCAACGTTCCCTGAGTCCCGGTTAATAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGACCAGACAAATAACGTATTTTCTGTTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGAGATCCGGAGGAGCTATTTCAGGTCATAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCGGCCACGCCCGCGTAGCAGATAGCCGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAGCGTTCCTGACGTCTGAATTTCATATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGATATCGAACATTTGATGCGTATTGCGGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGCTTATCTTGAAATCGTCATCGGTCAGACCGTGTTCCCCGCGCCAGCGGGGATAAACCGGATCATCACCCAGGCATTTTCTGGAATATGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATCCCGATGATCATGAATATTTCTGGCGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAAATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP043509|2|2|1047892-1048896|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATGATTTAAACACCCAAACGCTGGGAATAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCTGGACACTGAGACCGGATCTGATTGGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	ATTCGACGACTTTCCACTCCTGAGAGTGTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGATGCTTGTATGTGGGTGAGAGAAGAACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGCATCAACGATTTGTTGACACATCCAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAATTAACTCACACTATTGCGCTGATATAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTTCATCGACAGCGTGTTGTCGCGGTGCTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGGATGGAAAAAATGGGAGCCAGTTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATGCCACGAAAGCGGCGCGTTTCTAGCGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGCCTTCAGACACTTTAGCCAGGTTCCCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGAAAAAAAAGACGACGAACTCGTCACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGATATCCGCCTGATTGGTGATCTGCGTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCGCAGGTTCGCCTTTCGGGCCTTTGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAACGTCTTTTGCTAGGTAGCATTCTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCACCGAGCTATTCGGGCCGCTCGGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATTTTATGACGACTGGCCGAAATCGTACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAATACTCTCCAAAATGAGTCAGTCCGAGGTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCCACATCCTGTTTAGCTCCATATAGCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATTTCTCCGCGAACGCCCACCAGTCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCGCCAGCGGTGCCCGCGATCTGGAGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTTTTTTTTATCGGTGTGGTTCGGTCGTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GGCGCAACGTTCCCTGAGTCCCGGTTAATAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAGACCAGACAAATAACGTATTTTCTGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAGATCCGGAGGAGCTATTTCAGGTCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGGCCACGCCCGCGTAGCAGATAGCCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCGTTCCTGACGTCTGAATTTCATATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGATATCGAACATTTGATGCGTATTGCGGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCTTATCTTGAAATCGTCATCGGTCAGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCATCACCCAGGCATTTTCTGGAATATGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCCCGATGATCATGAATATTTCTGGCGCCA


>NZ_CP043509|2|2|1047892-1049811|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATGATTTAAACACCCAAACGCTGGGAATAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCTGGACACTGAGACCGGATCTGATTGGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	ATTCGACGACTTTCCACTCCTGAGAGTGTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGATGCTTGTATGTGGGTGAGAGAAGAACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGCATCAACGATTTGTTGACACATCCAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAATTAACTCACACTATTGCGCTGATATAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTTCATCGACAGCGTGTTGTCGCGGTGCTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGGATGGAAAAAATGGGAGCCAGTTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATGCCACGAAAGCGGCGCGTTTCTAGCGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGCCTTCAGACACTTTAGCCAGGTTCCCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGAAAAAAAAGACGACGAACTCGTCACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGATATCCGCCTGATTGGTGATCTGCGTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCGCAGGTTCGCCTTTCGGGCCTTTGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAACGTCTTTTGCTAGGTAGCATTCTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCACCGAGCTATTCGGGCCGCTCGGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATTTTATGACGACTGGCCGAAATCGTACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATACTCTCCAAAATGAGTCAGTCCGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCCACATCCTGTTTAGCTCCATATAGCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATTTCTCCGCGAACGCCCACCAGTCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCGCCAGCGGTGCCCGCGATCTGGAGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTTTTTTTTATCGGTGTGGTTCGGTCGTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GGCGCAACGTTCCCTGAGTCCCGGTTAATAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAGACCAGACAAATAACGTATTTTCTGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAGATCCGGAGGAGCTATTTCAGGTCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGGCCACGCCCGCGTAGCAGATAGCCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCGTTCCTGACGTCTGAATTTCATATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGATATCGAACATTTGATGCGTATTGCGGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCTTATCTTGAAATCGTCATCGGTCAGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCATCACCCAGGCATTTTCTGGAATATGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCCCGATGATCATGAATATTTCTGGCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP043509|2|2|1047892-1049811|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATGATTTAAACACCCAAACGCTGGGAATAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCTGGACACTGAGACCGGATCTGATTGGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	ATTCGACGACTTTCCACTCCTGAGAGTGTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGATGCTTGTATGTGGGTGAGAGAAGAACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGCATCAACGATTTGTTGACACATCCAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAATTAACTCACACTATTGCGCTGATATAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTTCATCGACAGCGTGTTGTCGCGGTGCTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGGATGGAAAAAATGGGAGCCAGTTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATGCCACGAAAGCGGCGCGTTTCTAGCGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGCCTTCAGACACTTTAGCCAGGTTCCCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGAAAAAAAAGACGACGAACTCGTCACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGATATCCGCCTGATTGGTGATCTGCGTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCGCAGGTTCGCCTTTCGGGCCTTTGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAACGTCTTTTGCTAGGTAGCATTCTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCACCGAGCTATTCGGGCCGCTCGGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATTTTATGACGACTGGCCGAAATCGTACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATACTCTCCAAAATGAGTCAGTCCGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCCACATCCTGTTTAGCTCCATATAGCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATTTCTCCGCGAACGCCCACCAGTCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCGCCAGCGGTGCCCGCGATCTGGAGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTTTTTTTTATCGGTGTGGTTCGGTCGTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GGCGCAACGTTCCCTGAGTCCCGGTTAATAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAGACCAGACAAATAACGTATTTTCTGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAGATCCGGAGGAGCTATTTCAGGTCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGGCCACGCCCGCGTAGCAGATAGCCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCGTTCCTGACGTCTGAATTTCATATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGATATCGAACATTTGATGCGTATTGCGGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCTTATCTTGAAATCGTCATCGGTCAGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCATCACCCAGGCATTTTCTGGAATATGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCCCGATGATCATGAATATTTCTGGCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP043509|2|3|1048929-1049750|PILER-CR
	GATGATTTAAACACCCAAACGCTGGGAATAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCTGGACACTGAGACCGGATCTGATTGGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	ATTCGACGACTTTCCACTCCTGAGAGTGTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGATGCTTGTATGTGGGTGAGAGAAGAACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGCATCAACGATTTGTTGACACATCCAGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAATTAACTCACACTATTGCGCTGATATAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTTCATCGACAGCGTGTTGTCGCGGTGCTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGGATGGAAAAAATGGGAGCCAGTTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATGCCACGAAAGCGGCGCGTTTCTAGCGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGCCTTCAGACACTTTAGCCAGGTTCCCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGAAAAAAAAGACGACGAACTCGTCACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGATATCCGCCTGATTGGTGATCTGCGTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCGCAGGTTCGCCTTTCGGGCCTTTGAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAACGTCTTTTGCTAGGTAGCATTCTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCACCGAGCTATTCGGGCCGCTCGGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATTTTATGACGACTGGCCGAAATCGTACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAATACTCTCCAAAATGAGTCAGTCCGAGGTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCCACATCCTGTTTAGCTCCATATAGCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATTTCTCCGCGAACGCCCACCAGTCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCGCCAGCGGTGCCCGCGATCTGGAGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTTTTTTTTATCGGTGTGGTTCGGTCGTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GGCGCAACGTTCCCTGAGTCCCGGTTAATAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAGACCAGACAAATAACGTATTTTCTGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAGATCCGGAGGAGCTATTTCAGGTCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGGCCACGCCCGCGTAGCAGATAGCCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCGTTCCTGACGTCTGAATTTCATATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGATATCGAACATTTGATGCGTATTGCGGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCTTATCTTGAAATCGTCATCGGTCAGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCATCACCCAGGCATTTTCTGGAATATGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCCCGATGATCATGAATATTTCTGGCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043509.1\|WP_023137835.1\|1043563_1044124_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP043509.1\|WP_023137836.1\|1044137_1045196_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP043509.1\|WP_023137838.1\|1046581_1047502_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP043509.1\|WP_001221538.1\|1057182_1057944_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP043509.1\|WP_000281478.1\|1045934_1046585_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP043509.1\|WP_000490481.1\|1049825_1050872_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP043509.1\|WP_075321918.1\|1037459_1038413_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP043509.1\|WP_001518648.1\|1047501_1047795_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP043509.1\|WP_000517480.1\|1054636_1054948_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP043509.1\|WP_023137837.1\|1045206_1045953_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP043509.1\|WP_001118109.1\|1054089_1054446_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP043509.1\|WP_000372384.1\|1051122_1052031_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP043509.1\|WP_001219245.1\|1055676_1056156_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP043509.1\|WP_001645986.1\|1036637_1037372_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP043509.1\|WP_023137841.1\|1052040_1053480_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP043509.1\|WP_000741653.1\|1054966_1055677_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP043509.1\|WP_023137833.1\|1038856_1041517_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP043509.1\|WP_023137834.1\|1042010_1043567_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP043509.1\|WP_020899156.1\|1056152_1057202_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP043509.1\|WP_001173663.1\|1053466_1054072_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661

Protein	Function_ID	Function_description	E-value
NZ_CP043509.1\|WP_023137835.1\|1043563_1044124_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	7.18198e-33
NZ_CP043509.1\|WP_023137836.1\|1044137_1045196_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	9.44331e-132
NZ_CP043509.1\|WP_023137838.1\|1046581_1047502_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	6.28987e-157
NZ_CP043509.1\|WP_001221538.1\|1057182_1057944_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP043509.1\|WP_000281478.1\|1045934_1046585_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	5.84644e-75
NZ_CP043509.1\|WP_000490481.1\|1049825_1050872_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP043509.1\|WP_075321918.1\|1037459_1038413_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP043509.1\|WP_001518648.1\|1047501_1047795_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP043509.1\|WP_000517480.1\|1054636_1054948_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP043509.1\|WP_023137837.1\|1045206_1045953_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.31361e-49
NZ_CP043509.1\|WP_001118109.1\|1054089_1054446_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP043509.1\|WP_000372384.1\|1051122_1052031_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP043509.1\|WP_001219245.1\|1055676_1056156_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
NZ_CP043509.1\|WP_001645986.1\|1036637_1037372_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.50033e-138
NZ_CP043509.1\|WP_023137841.1\|1052040_1053480_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP043509.1\|WP_000741653.1\|1054966_1055677_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.09575e-119
NZ_CP043509.1\|WP_023137833.1\|1038856_1041517_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP043509.1\|WP_023137834.1\|1042010_1043567_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP043509.1\|WP_020899156.1\|1056152_1057202_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP043509.1\|WP_001173663.1\|1053466_1054072_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146

>NZ_CP043509.1|WP_001518648.1|1047501_1047795_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP043509.1|WP_023137838.1|1046581_1047502_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPPIEEVLAAGEIKPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP043509.1|WP_000281478.1|1045934_1046585_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPMLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIRREKSRQMIQFSSVDYTGVLVLNDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP043509.1|WP_023137837.1|1045206_1045953_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQAPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDKFNTLKLTLPGLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP043509.1|WP_023137836.1|1044137_1045196_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKEDLTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGEAGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYVQETAFKDFNVMNQQGSMKDVLDFICA
>NZ_CP043509.1|WP_023137835.1|1043563_1044124_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKAAWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKTPDELLRQLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLSHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP043509.1|WP_023137834.1|1042010_1043567_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MFPINLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEPLTGEKVSIASLLPEIPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDVADLPLSDQCDAAVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANKEYPALVVNVFNARRLRDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFTNAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGQKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP043509.1|WP_023137833.1|1038856_1041517_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKTGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEHVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKDEFERLKGESFQQWCVEQHQNKDFAIVIVVTDSAACGYSANEGLTGKME
>NZ_CP043509.1|WP_075321918.1|1037459_1038413_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSSIKDILNISDDTVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKIFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP043509.1|WP_001645986.1|1036637_1037372_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP043509.1|WP_000490481.1|1049825_1050872_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP043509.1|WP_000372384.1|1051122_1052031_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP043509.1|WP_023137841.1|1052040_1053480_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAIDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP043509.1|WP_001173663.1|1053466_1054072_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP043509.1|WP_001118109.1|1054089_1054446_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP043509.1|WP_000517480.1|1054636_1054948_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP043509.1|WP_000741653.1|1054966_1055677_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLTISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP043509.1|WP_001219245.1|1055676_1056156_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP043509.1|WP_020899156.1|1056152_1057202_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHTREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP043509.1|WP_001221538.1|1057182_1057944_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP043509_2	2.22\|1049202\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049202-1049233	32	NZ_CP043509.1	1181044-1181075	0	1.0

1. spacer 2.22|1049202|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to position: 1181044-1181075, mismatch: 0, identity: 1.0

ggcgcaacgttccctgagtcccggttaataga	CRISPR spacer
ggcgcaacgttccctgagtcccggttaataga	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043509_1	1.23\|1031221\|32\|NZ_CP043509\|CRISPRCasFinder,CRT	1031221-1031252	32	CP053405	Salmonella enterica strain 2010K-2057 plasmid unnamed2, complete sequence	21764-21795	1	0.969
NZ_CP043509_2	2.26\|1049446\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049446-1049477	32	NZ_KY978631	Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence	49397-49428	1	0.969
NZ_CP043509_2	2.26\|1049446\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049446-1049477	32	CP045557	Citrobacter sp. S39 plasmid pS39-2, complete sequence	129819-129850	1	0.969
NZ_CP043509_2	2.26\|1049446\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049446-1049477	32	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	61179-61210	1	0.969
NZ_CP043509_2	2.26\|1049446\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049446-1049477	32	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	14811-14842	1	0.969
NZ_CP043509_2	2.26\|1049446\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049446-1049477	32	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	76296-76327	1	0.969
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	NZ_KX960110	Escherichia coli strain CREC-TJ2 plasmid pCREC-TJ2-NDM, complete sequence	44090-44121	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	NZ_KU295131	Escherichia coli strain BK28009 plasmid pBK28009, complete sequence	54357-54388	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	NZ_CP026237	Citrobacter freundii complex sp. CFNIH3 plasmid pCFR-9161, complete sequence	201730-201761	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	NZ_CP025944	Escherichia coli strain SCEC020023 plasmid pOXA10_020023, complete sequence	86269-86300	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	NZ_CP038456	Escherichia coli strain EC-129 plasmid pEC129_3	7761-7792	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	MH430882	Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP, complete sequence	30333-30364	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	MH430881	Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP-CRO, complete sequence	98601-98632	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	NZ_CP021734	Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence	12326-12357	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	MN604267	Salmonella enterica subsp. enterica serovar London strain SAL-19-0623 plasmid pSAL-19-0623_NDM, complete sequence	161395-161426	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	NZ_MG870194	Salmonella enterica subsp. enterica serovar London strain Sa128 plasmid pSa128, complete sequence	102879-102910	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	MG874043	Salmonella sp. strain Sa63 plasmid pSa63-CIP, complete sequence	59325-59356	2	0.938
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	MG874044	Salmonella sp. strain Sa76 plasmid pSa76-CIP, complete sequence	96036-96067	2	0.938
NZ_CP043509_1	1.23\|1031221\|32\|NZ_CP043509\|CRISPRCasFinder,CRT	1031221-1031252	32	NZ_CP012163	Enterobacter roggenkampii strain 35734 plasmid p35734-109.753kb, complete sequence	32903-32934	2	0.938
NZ_CP043509_1	1.23\|1031221\|32\|NZ_CP043509\|CRISPRCasFinder,CRT	1031221-1031252	32	NZ_CP009851	UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4 plasmid pENT-c88, complete sequence	36222-36253	2	0.938
NZ_CP043509_1	1.23\|1031221\|32\|NZ_CP043509\|CRISPRCasFinder,CRT	1031221-1031252	32	NZ_CP029434	Klebsiella quasipneumoniae strain CAV2013 plasmid pCAV2013-61, complete sequence	11707-11738	2	0.938
NZ_CP043509_1	1.23\|1031221\|32\|NZ_CP043509\|CRISPRCasFinder,CRT	1031221-1031252	32	NZ_CP029428	Klebsiella quasipneumoniae strain CAV2018 plasmid pCAV2018-51, complete sequence	48089-48120	2	0.938
NZ_CP043509_1	1.23\|1031221\|32\|NZ_CP043509\|CRISPRCasFinder,CRT	1031221-1031252	32	NZ_CP029440	Klebsiella quasipneumoniae strain CAV1947 plasmid pCAV1947-61, complete sequence	49931-49962	2	0.938
NZ_CP043509_2	2.26\|1049446\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049446-1049477	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	31575-31606	2	0.938
NZ_CP043509_2	2.26\|1049446\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049446-1049477	32	NZ_CP008900	Enterobacter hormaechei subsp. hoffmannii ECNIH3 plasmid pENT-d4a, complete sequence	57237-57268	2	0.938
NZ_CP043509_2	2.26\|1049446\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049446-1049477	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	61043-61074	2	0.938
NZ_CP043509_2	2.19\|1049019\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049019-1049050	32	MG757166	Gordonia phage SuperSulley, complete genome	46939-46970	6	0.812
NZ_CP043509_2	2.19\|1049019\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049019-1049050	32	MF919510	Gordonia phage Kabluna, complete genome	45875-45906	6	0.812
NZ_CP043509_2	2.19\|1049019\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049019-1049050	32	MH779499	Gordonia phage Buggaboo, complete genome	46939-46970	6	0.812
NZ_CP043509_2	2.7\|1048287\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048287-1048318	32	CP007157	Corynebacterium falsenii DSM 44353 strain BL 8171 plasmid phiCFAL8171I, complete sequence	13832-13863	7	0.781
NZ_CP043509_2	2.11\|1048531\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048531-1048562	32	MH648945	Microviridae sp. isolate ctdb011, complete genome	2602-2633	7	0.781
NZ_CP043509_2	2.13\|1048653\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048653-1048684	32	NZ_CP025885	Escherichia coli strain 503440 plasmid p503440_68, complete sequence	23151-23182	7	0.781
NZ_CP043509_2	2.13\|1048653\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048653-1048684	32	NZ_CP024259	Escherichia coli O25:H16 strain F5505-C1 plasmid unnamed2, complete sequence	54548-54579	7	0.781
NZ_CP043509_2	2.13\|1048653\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048653-1048684	32	NZ_CP024255	Escherichia coli strain ATCC 43886 plasmid unnamed2, complete sequence	63032-63063	7	0.781
NZ_CP043509_2	2.13\|1048653\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048653-1048684	32	NZ_CP027106	Escherichia coli strain RM14721 plasmid pRM14721, complete sequence	75212-75243	7	0.781
NZ_CP043509_2	2.20\|1049080\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049080-1049111	32	NC_011961	Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence	484742-484773	7	0.781
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP010149	Escherichia coli strain D6 plasmid A, complete sequence	119865-119896	7	0.781
NZ_CP043509_1	1.1\|1029879\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1029879-1029910	32	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	220987-221018	8	0.75
NZ_CP043509_1	1.7\|1030245\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030245-1030276	32	NC_012732	Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence	3896-3927	8	0.75
NZ_CP043509_1	1.8\|1030306\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030306-1030337	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	816843-816874	8	0.75
NZ_CP043509_1	1.13\|1030611\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030611-1030642	32	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	192641-192672	8	0.75
NZ_CP043509_2	2.7\|1048287\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048287-1048318	32	NC_048170	Escherichia phage vB_EcoM_Goslar, complete genome	138105-138136	8	0.75
NZ_CP043509_2	2.15\|1048775\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048775-1048806	32	MH622929	Microviridae sp. isolate ctei769, complete genome	968-999	8	0.75
NZ_CP043509_2	2.15\|1048775\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048775-1048806	32	MH992199	Apis mellifera associated microvirus 39 isolate INH_SP_224, complete genome	1750-1781	8	0.75
NZ_CP043509_2	2.15\|1048775\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048775-1048806	32	MG945537	UNVERIFIED: Microviridae sp. isolate 2415-180101, complete genome	2825-2856	8	0.75
NZ_CP043509_2	2.15\|1048775\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048775-1048806	32	MG945914	UNVERIFIED: Microviridae sp. isolate 8858-1602, partial genome	2160-2191	8	0.75
NZ_CP043509_2	2.18\|1048958\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1048958-1048989	32	NZ_CP034151	Pantoea agglomerans strain L15 plasmid pPagL15_3, complete sequence	26441-26472	8	0.75
NZ_CP043509_2	2.19\|1049019\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049019-1049050	32	NZ_CP016082	Streptomyces sp. SAT1 plasmid unnamed2, complete sequence	93284-93315	8	0.75
NZ_CP043509_2	2.21\|1049141\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049141-1049172	32	MN693021	Marine virus AFVG_117M32, complete genome	58588-58619	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP026494	Escherichia coli strain HS13-1 plasmid pHS13-1-IncF, complete sequence	45712-45743	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_KU664810	Escherichia coli strain 11.3-R3 plasmid pCERC5, complete sequence	19112-19143	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_KY007017	Escherichia coli strain 14.3-R4 plasmid pCERC9, complete sequence	19112-19143	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	KR827684	Escherichia coli plasmid pCERC3, complete sequence	20389-20420	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_KP119165	Escherichia coli strain QT598 plasmid pEC598, complete sequence	53830-53861	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_KP398867	Escherichia coli strain DB04277 plasmid pDB4277, complete sequence	1977-2008	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP010147	Escherichia coli strain D5 plasmid B, complete genome	75306-75337	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP010232	Escherichia coli strain S30 plasmid A, complete sequence	129129-129160	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_AP017611	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence	27733-27764	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP010158	Escherichia coli strain D10 plasmid A, complete genome	106719-106750	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP043952	Escherichia coli strain ST95-32 plasmid pST95-32-2, complete sequence	19687-19718	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP010141	Escherichia coli strain D3 plasmid A, complete sequence	58013-58044	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP049349	Escherichia coli strain 3R plasmid p3R-1, complete sequence	103085-103116	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP038182	Escherichia coli strain 2 HS-C plasmid p2HS-C-2, complete sequence	85648-85679	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP021087	Escherichia coli strain 13P460A plasmid p13P460A-2, complete sequence	34094-34125	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP053732	Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence	25280-25311	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP020546	Escherichia coli strain ZJ3920 plasmid pZJ3920-1, complete sequence	46254-46285	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	CP043737	Escherichia coli strain CVM N17EC0616 plasmid pN17EC0616-1, complete sequence	95838-95869	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP010316	Escherichia coli strain 789 plasmid pAPEC-O78-ColV	5578-5609	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_LS992167	Escherichia coli isolate Escherichia coli str. TO6 plasmid 2, complete sequence	69050-69081	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP019282	Escherichia coli strain 13P484A plasmid p13P484A-2, complete sequence	55622-55653	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP034739	Escherichia coli strain L65 plasmid pL65-2, complete sequence	53704-53735	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP054369	Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence	52102-52133	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP048296	Escherichia coli strain CVM N18EC0432 plasmid pN18EC0432-2, complete sequence	108396-108427	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP019251	Escherichia coli strain 13KWH46 plasmid p13KWH46-1, complete sequence	62190-62221	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP021728	Escherichia coli strain Combat11I9 plasmid pCombat11I9-2, complete sequence	72213-72244	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP005931	Escherichia coli APEC IMT5155 plasmid p1ColV5155, complete sequence	49145-49176	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP026854	Escherichia coli strain MS7163 plasmid pMS7163A, complete sequence	85073-85104	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP019247	Escherichia coli strain Combat13F7 plasmid pCombat13F7-2, complete sequence	55432-55463	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP019268	Escherichia coli strain 13C1079T plasmid p13C1079T-1, complete sequence	53419-53450	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP029243	Escherichia coli strain ECCRA-119 plasmid pTB201, complete sequence	114657-114688	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	CM019851	Escherichia coli strain CVM N17EC0326 plasmid pN17EC0326-1, complete sequence, whole genome shotgun sequence	36307-36338	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP049355	Escherichia coli strain T28R plasmid pT28R-2, complete sequence	29837-29868	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP033091	Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 plasmid unnamed, complete sequence	34235-34266	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	LT906556	Escherichia coli isolate E. coli RL465 genome assembly, plasmid: I	25840-25871	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP032263	Escherichia coli strain AR_0089 plasmid unnamed1, complete sequence	106356-106387	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP027357	Escherichia coli strain 2013C-4991 plasmid unnamed2	38926-38957	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP019018	Escherichia coli strain Ecol_244 plasmid pEC244_2, complete sequence	37732-37763	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP019007	Escherichia coli strain Ecol_AZ159 plasmid pECAZ159_1, complete sequence	83389-83420	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP011916	Escherichia coli strain PSUO2 plasmid pPSUO2, complete sequence	68772-68803	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP019456	Escherichia coli strain FHI_NMBU_03 plasmid pFHI_NMBU_03_1, complete sequence	60414-60445	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP018994	Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_1, complete sequence	137844-137875	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP047878	Escherichia coli strain LD22-1 plasmid pLD22-1-135kb, complete sequence	34230-34261	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP046718	Escherichia coli strain T16R plasmid pT16R-2, complete sequence	32415-32446	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP041303	Escherichia coli strain MSHS 133 plasmid pCys-11, complete sequence	80412-80443	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_011964	Escherichia coli plasmid pAPEC-O103-ColBM, complete sequence	45154-45185	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP012636	Escherichia coli strain SF-088 plasmid pSF-088-1, complete sequence	58114-58145	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP022731	Escherichia coli strain SA186 plasmid pSA186_2, complete sequence	78297-78328	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP022732	Escherichia coli strain SA186 plasmid pSA186_3, complete sequence	51203-51234	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_LT985319	Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_pII	91235-91266	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_AP019676	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-1, complete sequence	34308-34339	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_024956	Escherichia coli strain K-12 plasmid pDM0133, complete sequence	11814-11845	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_025179	Escherichia coli plasmid pC59-153, complete sequence	17858-17889	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	CP042897	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_01, complete sequence	69295-69326	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP051689	Escherichia coli strain SCU-387 plasmid pSCU-387-1, complete sequence	40514-40545	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP012377	Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence	25755-25786	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	KU932025	Escherichia coli plasmid pEC14I, complete sequence	59794-59825	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_025175	Escherichia coli plasmid pH2332-166, complete sequence	108111-108142	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_025139	Escherichia coli plasmid pH2291-144, complete sequence	55380-55411	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_LS992172	Escherichia coli isolate Escherichia coli str. TO73 plasmid 2, complete sequence	23770-23801	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP041301	Escherichia coli strain MSHS 472 plasmid pCys-6, complete sequence	64366-64397	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	CP054455	Escherichia coli strain SCU-487 plasmid pSCU-487-1, complete sequence	34211-34242	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP022166	Escherichia coli strain M160133 plasmid pM160133_p2, complete sequence	48665-48696	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP047577	Escherichia coli strain 94EC plasmid p94EC-1, complete sequence	135008-135039	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	KU578032	Escherichia coli plasmid pCERC4, complete sequence	19112-19143	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP026643	Escherichia coli strain FORC_082 plasmid pFORC82_2, complete sequence	36525-36556	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP042586	Escherichia coli strain LD91-1 plasmid pLD91-1-146kb, complete sequence	34230-34261	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP023363	Escherichia coli strain 144 plasmid 134q, complete sequence	1586-1617	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP023367	Escherichia coli strain 1428 plasmid p111, complete sequence	31774-31805	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP023384	Escherichia coli strain 1223 plasmid p147, complete sequence	40259-40290	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_010409	Escherichia coli plasmid pVM01, complete sequence	51610-51641	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	CP043743	Escherichia coli strain CVM N17EC0211 plasmid pN17EC0211, complete sequence	92667-92698	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	MN419430	Escherichia coli strain 2016-4017437 plasmid p17437, complete sequence	144746-144777	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP020934	Escherichia coli strain HB-Coli0 plasmid unnamed1, complete sequence	14793-14824	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_LR025097	Escherichia coli isolate EC-7215 plasmid 2, complete sequence	96783-96814	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_011980	Escherichia coli chi7122 plasmid pAPEC-1, complete sequence	9908-9939	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP030791	Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211A-ColV, complete sequence	39860-39891	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP053282	Escherichia coli strain SCU-308 plasmid pSCU-308-1, complete sequence	38678-38709	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_020271	Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence	105768-105799	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	MN848327	Escherichia coli strain T16RC plasmid pT16RC-1, complete sequence	59961-59992	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	MN823988	Escherichia coli strain 14406 plasmid p14406-FII, complete sequence	58080-58111	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_LR740777	Escherichia coli strain BEN2908 isolate 1 day old chicken plasmid pAPEC2908	41984-42015	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP047667	Escherichia coli strain LD26-1 plasmid pLD26-1-135kb, complete sequence	98510-98541	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP041299	Escherichia coli O1:H42 strain CLSC36 plasmid pCys-1, complete sequence	104166-104197	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP031107	Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence	145376-145407	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_LR740759	Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202	60668-60699	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP012113	Escherichia coli strain PSUO78 plasmid pPSUO78_1, complete sequence	129984-130015	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP019055	Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence	55977-56008	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP048026	Escherichia coli strain GZEC065 plasmid pTEM1-GZEC065, complete sequence	67157-67188	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP029744	Escherichia coli strain AR_0085 plasmid unnamed3, complete sequence	75175-75206	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	LC484363	Escherichia coli C1 plasmid pColV-C1 DNA, complete sequence	66361-66392	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP041920	Escherichia coli strain Ec40743 plasmid unnamed1, complete sequence	16487-16518	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP051224	Escherichia coli strain SCZE5 plasmid pSCZE2	29840-29871	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_007675	Escherichia coli A2363 plasmid pAPEC-O2-ColV, complete sequence	148977-149008	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_018954	Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence	126559-126590	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_018966	Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence	125750-125781	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP014489	Escherichia coli strain G749 plasmid pG749_1, complete sequence	107995-108026	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	CP027485	Escherichia coli strain 2013C-4390 plasmid unnamed, complete sequence	110445-110476	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP024140	Escherichia coli strain 14EC020 plasmid p14EC020b, complete sequence	11159-11190	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_011747	Escherichia coli S88 plasmid pECOS88, complete sequence	101722-101753	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP049102	Escherichia coli strain EC28 plasmid p2, complete sequence	35498-35529	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_017659	Escherichia coli O83:H1 str. NRG 857C plasmid pO83_CORR, complete sequence	9906-9937	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP026940	Escherichia coli strain CFS3313 plasmid pCFS3313-1, complete sequence	34235-34266	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP042245	Escherichia coli strain PU-1 plasmid pColV-PU1, complete sequence	188994-189025	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP025403	Escherichia coli strain MS8345 plasmid pMS8345B, complete sequence	100796-100827	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_LT985293	Escherichia coli strain 4410-1 plasmid RCS79_p, complete sequence	150676-150707	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	MN807689	Escherichia coli strain A241 plasmid pA241-TEM, complete sequence	20393-20424	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MK430046	Escherichia coli strain 11.4-R4 plasmid pCERC13, complete sequence	80391-80422	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MK461929	Escherichia coli strain 2009_36 plasmid p2009_36_F, complete sequence	34265-34296	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MK416151	Escherichia coli strain 6TC9eCTX plasmid pHNTC9e, complete sequence	27242-27273	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MK461928	Escherichia coli strain F2_14D plasmid pF2_14D_F, complete sequence	34264-34295	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MK878891	Escherichia coli strain J53 plasmid pMG336, complete sequence	100856-100887	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MK878890	Escherichia coli strain J53 plasmid pMG337, complete sequence	101317-101348	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MN053930	Escherichia coli strain 2.3-R4 plasmid pCERC14, complete sequence	19116-19147	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MH422552	Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence	78590-78621	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MH580302	Escherichia coli strain 1107 plasmid p1107-118K, complete sequence	22383-22414	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP006635	Escherichia coli PCN033 plasmid p3PCN033, complete sequence	118672-118703	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MG014722	Escherichia coli strain P2-3 plasmid pP2-3T, complete sequence	210116-210147	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MF474175	Escherichia coli strain J53/pNIT-HK plasmid pNIT-HK, complete sequence	95457-95488	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MG825372	Escherichia coli strain 1106 plasmid p1106-IncFIB, complete sequence	40752-40783	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	125785-125816	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MG825378	Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence	140007-140038	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MF174860	Escherichia coli strain 6/14/6b plasmid pIncF-MU4, complete sequence	41127-41158	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MG385063	Escherichia coli strain WF5-29 plasmid pWF5-29, complete sequence	165380-165411	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MG838205	Escherichia coli strain 92944 plasmid p92944-mph, complete sequence	47335-47366	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_MH195200	Escherichia coli strain 2009-52 plasmid pSDJ2009-52F, complete sequence	72068-72099	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NZ_CP025329	Escherichia coli strain ExPEC XM plasmid unnamed	19689-19720	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_023327	Escherichia coli ACN001 plasmid pACN001-B, complete sequence	19689-19720	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	CP043741	Escherichia coli strain CVM N17EC0320 plasmid pN17EC0320-2, complete sequence	36685-36716	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	MN816372	Escherichia coli strain A130 plasmid pA130-TEM, complete sequence	16506-16537	8	0.75
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_009837	Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence	115461-115492	8	0.75
NZ_CP043509_2	2.30\|1049690\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049690-1049721	32	KM389216	UNVERIFIED: Pseudomonas phage F_ET605sp/Pa1651 clone contig00001 genomic sequence	149-180	8	0.75
NZ_CP043509_1	1.1\|1029879\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1029879-1029910	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	80221-80252	9	0.719
NZ_CP043509_1	1.7\|1030245\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030245-1030276	32	NZ_CP015253	Bacillus thuringiensis Bt18247 plasmid p113275, complete sequence	107974-108005	9	0.719
NZ_CP043509_1	1.8\|1030306\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030306-1030337	32	NC_009235	Burkholderia phage phi644-2 chromosome, complete genome	42902-42933	9	0.719
NZ_CP043509_1	1.8\|1030306\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030306-1030337	32	CP000625	Burkholderia phage phi644-2, complete genome	42902-42933	9	0.719
NZ_CP043509_1	1.8\|1030306\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030306-1030337	32	NC_005284	Burkholderia phage phi1026b, complete genome	48361-48392	9	0.719
NZ_CP043509_1	1.8\|1030306\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030306-1030337	32	AF447491	Bacteriophage phiE125, complete genome	46872-46903	9	0.719
NZ_CP043509_1	1.8\|1030306\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030306-1030337	32	AY453853	Bacteriophage phi1026b, complete genome	48361-48392	9	0.719
NZ_CP043509_1	1.8\|1030306\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030306-1030337	32	NC_003309	Burkholderia phage phiE125, complete genome	46872-46903	9	0.719
NZ_CP043509_1	1.11\|1030489\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030489-1030520	32	MT818420	Microbacterium phage Gilda, complete genome	44374-44405	9	0.719
NZ_CP043509_1	1.11\|1030489\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030489-1030520	32	MK737941	Microbacterium phage Rachella, complete genome	44378-44409	9	0.719
NZ_CP043509_1	1.11\|1030489\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030489-1030520	32	MT522001	Microbacterium phage Karate, complete genome	44190-44221	9	0.719
NZ_CP043509_1	1.11\|1030489\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030489-1030520	32	MK801732	Microbacterium phage NarutoRun, complete genome	44352-44383	9	0.719
NZ_CP043509_1	1.11\|1030489\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030489-1030520	32	NC_047986	Microbacterium phage Krampus, complete genome	44387-44418	9	0.719
NZ_CP043509_1	1.11\|1030489\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030489-1030520	32	MK801731	Microbacterium phage Anakin, complete genome	44352-44383	9	0.719
NZ_CP043509_1	1.11\|1030489\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030489-1030520	32	MH271292	Microbacterium phage AnnaSerena, complete genome	44386-44417	9	0.719
NZ_CP043509_2	2.8\|1048348\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048348-1048379	32	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	203078-203109	9	0.719
NZ_CP043509_2	2.8\|1048348\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048348-1048379	32	AJ312240	Bacteriophage PSA complete genome	31003-31034	9	0.719
NZ_CP043509_2	2.8\|1048348\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048348-1048379	32	KJ094023	Listeria phage LP-101, complete genome	37321-37352	9	0.719
NZ_CP043509_2	2.12\|1048592\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048592-1048623	32	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	1048570-1048601	9	0.719
NZ_CP043509_2	2.15\|1048775\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048775-1048806	32	MH617086	Microviridae sp. isolate ctcc904, complete genome	1058-1089	9	0.719
NZ_CP043509_2	2.20\|1049080\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049080-1049111	32	NZ_CP023779	Nocardia terpenica strain NC_YFY_NT001 plasmid p_NC_YFY_NT001, complete sequence	9675-9706	9	0.719
NZ_CP043509_2	2.20\|1049080\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049080-1049111	32	NZ_CP053858	Rhizobium pusense strain 76 plasmid pR76, complete sequence	93143-93174	9	0.719
NZ_CP043509_2	2.25\|1049385\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049385-1049416	32	NZ_CP054025	Rhizobium sp. JKLM12A2 plasmid pPR12A204, complete sequence	229907-229938	9	0.719
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	KY554763	Lactococcus phage LW32, complete genome	38158-38189	9	0.719
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_049806	Lactococcus phage LW31, complete genome	38548-38579	9	0.719
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	MN855809	Siphoviridae sp. isolate 134, complete genome	8191-8222	9	0.719
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	KY554765	Lactococcus phage LW4, complete genome	37656-37687	9	0.719
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	MN528768	Lactococcus phage P596, complete genome	36709-36740	9	0.719
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	KY554764	Lactococcus phage LW33, complete genome	37895-37926	9	0.719
NZ_CP043509_2	2.29\|1049629\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049629-1049660	32	NC_049805	Lactococcus phage phiQ1 DNA, complete genome	24911-24942	9	0.719
NZ_CP043509_1	1.18\|1030916\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1030916-1030947	32	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	548535-548566	10	0.688
NZ_CP043509_1	1.21\|1031099\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1031099-1031130	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	191710-191741	10	0.688
NZ_CP043509_1	1.21\|1031099\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1031099-1031130	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	237223-237254	10	0.688
NZ_CP043509_2	2.12\|1048592\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048592-1048623	32	NC_014304	Erwinia billingiae Eb661 plasmid pEB102, complete sequence	59454-59485	10	0.688
NZ_CP043509_2	2.13\|1048653\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048653-1048684	32	NC_017385	Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence	149970-150001	10	0.688
NZ_CP043509_2	2.13\|1048653\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048653-1048684	32	NZ_CP012910	Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence	95014-95045	10	0.688
NZ_CP043509_2	2.13\|1048653\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048653-1048684	32	NC_014626	Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence	201543-201574	10	0.688
NZ_CP043509_2	2.15\|1048775\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048775-1048806	32	MG945415	UNVERIFIED: Microviridae sp. isolate 4165-1801, complete genome	3269-3300	10	0.688
NZ_CP043509_2	2.15\|1048775\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048775-1048806	32	MG883717	Microviridae sp. isolate Pig79-2, complete genome	3269-3300	10	0.688
NZ_CP043509_2	2.16\|1048836\|32\|NZ_CP043509\|PILER-CR,CRISPRCasFinder,CRT	1048836-1048867	32	NZ_CP028965	Burkholderia sp. IDO3 plasmid p1, complete sequence	355282-355313	10	0.688
NZ_CP043509_2	2.23\|1049263\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049263-1049294	32	MW149101	Microvirus sp. isolate gila4, complete genome	2104-2135	10	0.688
NZ_CP043509_2	2.28\|1049568\|32\|NZ_CP043509\|CRISPRCasFinder,CRT,PILER-CR	1049568-1049599	32	NZ_LN997849	Magnetospirillum sp. XM-1 isolate XM1 plasmid II, complete sequence	3723-3754	10	0.688
NZ_CP043509_2	2.31\|1049751\|32\|NZ_CP043509\|CRISPRCasFinder,CRT	1049751-1049782	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	47822-47853	11	0.656

1. spacer 1.23|1031221|32|NZ_CP043509|CRISPRCasFinder,CRT matches to CP053405 (Salmonella enterica strain 2010K-2057 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcattgagccgatgatgta	Protospacer
********.***********************

2. spacer 2.26|1049446|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY978631 (Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence) position: , mismatch: 1, identity: 0.969

aatagcgttcctgacgtctgaatttcatatcc	CRISPR spacer
agtagcgttcctgacgtctgaatttcatatcc	Protospacer
*.******************************

3. spacer 2.26|1049446|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to CP045557 (Citrobacter sp. S39 plasmid pS39-2, complete sequence) position: , mismatch: 1, identity: 0.969

aatagcgttcctgacgtctgaatttcatatcc	CRISPR spacer
aatagcgttcctgtcgtctgaatttcatatcc	Protospacer
************* ******************

4. spacer 2.26|1049446|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 1, identity: 0.969

aatagcgttcctgacgtctgaatttcatatcc	CRISPR spacer
aatagcgttcttgacgtctgaatttcatatcc	Protospacer
**********.*********************

5. spacer 2.26|1049446|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 1, identity: 0.969

aatagcgttcctgacgtctgaatttcatatcc	CRISPR spacer
aatagcgttcttgacgtctgaatttcatatcc	Protospacer
**********.*********************

6. spacer 2.26|1049446|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 1, identity: 0.969

aatagcgttcctgacgtctgaatttcatatcc	CRISPR spacer
aatagcgttcttgacgtctgaatttcatatcc	Protospacer
**********.*********************

7. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX960110 (Escherichia coli strain CREC-TJ2 plasmid pCREC-TJ2-NDM, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

8. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU295131 (Escherichia coli strain BK28009 plasmid pBK28009, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

9. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026237 (Citrobacter freundii complex sp. CFNIH3 plasmid pCFR-9161, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

10. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025944 (Escherichia coli strain SCEC020023 plasmid pOXA10_020023, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

11. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038456 (Escherichia coli strain EC-129 plasmid pEC129_3) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

12. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MH430882 (Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

13. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MH430881 (Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP-CRO, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

14. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021734 (Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

15. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MN604267 (Salmonella enterica subsp. enterica serovar London strain SAL-19-0623 plasmid pSAL-19-0623_NDM, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

16. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG870194 (Salmonella enterica subsp. enterica serovar London strain Sa128 plasmid pSa128, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

17. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MG874043 (Salmonella sp. strain Sa63 plasmid pSa63-CIP, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

18. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MG874044 (Salmonella sp. strain Sa76 plasmid pSa76-CIP, complete sequence) position: , mismatch: 2, identity: 0.938

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
gagatcgacctctcccatgtggtgcctgttac	Protospacer
******************** ***** *****

19. spacer 1.23|1031221|32|NZ_CP043509|CRISPRCasFinder,CRT matches to NZ_CP012163 (Enterobacter roggenkampii strain 35734 plasmid p35734-109.753kb, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcatcgagccgatgatgta	Protospacer
********.********.**************

20. spacer 1.23|1031221|32|NZ_CP043509|CRISPRCasFinder,CRT matches to NZ_CP009851 (UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4 plasmid pENT-c88, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcatcgagccgatgatgta	Protospacer
********.********.**************

21. spacer 1.23|1031221|32|NZ_CP043509|CRISPRCasFinder,CRT matches to NZ_CP029434 (Klebsiella quasipneumoniae strain CAV2013 plasmid pCAV2013-61, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcattgagccaatgatgta	Protospacer
********.**************.********

22. spacer 1.23|1031221|32|NZ_CP043509|CRISPRCasFinder,CRT matches to NZ_CP029428 (Klebsiella quasipneumoniae strain CAV2018 plasmid pCAV2018-51, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcattgagccaatgatgta	Protospacer
********.**************.********

23. spacer 1.23|1031221|32|NZ_CP043509|CRISPRCasFinder,CRT matches to NZ_CP029440 (Klebsiella quasipneumoniae strain CAV1947 plasmid pCAV1947-61, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcattgagccaatgatgta	Protospacer
********.**************.********

24. spacer 2.26|1049446|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.938

aatagcgttcctgacgtctgaatttcatatcc	CRISPR spacer
aataacgttcctgtcgtctgaatttcatatcc	Protospacer
****.******** ******************

25. spacer 2.26|1049446|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008900 (Enterobacter hormaechei subsp. hoffmannii ECNIH3 plasmid pENT-d4a, complete sequence) position: , mismatch: 2, identity: 0.938

aatagcgttcctgacgtctgaatttcatatcc	CRISPR spacer
aataacgttcctgtcgtctgaatttcatatcc	Protospacer
****.******** ******************

26. spacer 2.26|1049446|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 2, identity: 0.938

aatagcgttcctgacgtctgaatttcatatcc	CRISPR spacer
aataacgttcctgtcgtctgaatttcatatcc	Protospacer
****.******** ******************

27. spacer 2.19|1049019|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MG757166 (Gordonia phage SuperSulley, complete genome) position: , mismatch: 6, identity: 0.812

ccgaattt--ctccgcgaacgcccaccagtcgcg	CRISPR spacer
--gcattcagctccgggaacccccaccagtcgcg	Protospacer
  * ***.  ***** **** *************

28. spacer 2.19|1049019|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MF919510 (Gordonia phage Kabluna, complete genome) position: , mismatch: 6, identity: 0.812

ccgaattt--ctccgcgaacgcccaccagtcgcg	CRISPR spacer
--gcattcagctccgggaacccccaccagtcgcg	Protospacer
  * ***.  ***** **** *************

29. spacer 2.19|1049019|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MH779499 (Gordonia phage Buggaboo, complete genome) position: , mismatch: 6, identity: 0.812

ccgaattt--ctccgcgaacgcccaccagtcgcg	CRISPR spacer
--gcattcagctccgggaacccccaccagtcgcg	Protospacer
  * ***.  ***** **** *************

30. spacer 2.7|1048287|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to CP007157 (Corynebacterium falsenii DSM 44353 strain BL 8171 plasmid phiCFAL8171I, complete sequence) position: , mismatch: 7, identity: 0.781

cgcttcatcgacagcgtgttgtcg-cggtgctt	CRISPR spacer
gtcttcatcgacagggtgatgtcgccgatgcg-	Protospacer
  ************ *** ***** **.***

31. spacer 2.11|1048531|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MH648945 (Microviridae sp. isolate ctdb011, complete genome) position: , mismatch: 7, identity: 0.781

agcgaaaaaaaagacgacgaactcgtcacaac	CRISPR spacer
gacgaaaaaaactacgacgaactcgtcgaaat	Protospacer
..*********  **************. **.

32. spacer 2.13|1048653|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025885 (Escherichia coli strain 503440 plasmid p503440_68, complete sequence) position: , mismatch: 7, identity: 0.781

ctggcgcaggttcgcctttcgggcctttgagt	CRISPR spacer
ccggcgcaggttcgccttttggggcttttgcc	Protospacer
*.*****************.*** **** . .

33. spacer 2.13|1048653|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024259 (Escherichia coli O25:H16 strain F5505-C1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ctggcgcaggttcgcctttcgggcctttgagt	CRISPR spacer
ccggcgcaggttcgccttttggggcttttgcc	Protospacer
*.*****************.*** **** . .

34. spacer 2.13|1048653|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024255 (Escherichia coli strain ATCC 43886 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ctggcgcaggttcgcctttcgggcctttgagt	CRISPR spacer
ccggcgcaggttcgccttttggggcttttgcc	Protospacer
*.*****************.*** **** . .

35. spacer 2.13|1048653|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027106 (Escherichia coli strain RM14721 plasmid pRM14721, complete sequence) position: , mismatch: 7, identity: 0.781

ctggcgcaggttcgcctttcgggcctttgagt	CRISPR spacer
ccggcgcaggttcgccttttggggcttttgcc	Protospacer
*.*****************.*** **** . .

36. spacer 2.20|1049080|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

agttcgccagcggtgcccgcgatctggagctg-	CRISPR spacer
cgtgcggcagcggtgcccgcgatc-ggcgcgaa	Protospacer
 ** ** ***************** ** ** .

37. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010149 (Escherichia coli strain D6 plasmid A, complete sequence) position: , mismatch: 7, identity: 0.781

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagtgtca-	Protospacer
**.************.*******  *.*.* *

38. spacer 1.1|1029879|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gggcacgcggaggtctacggcgaatatattta	CRISPR spacer
gggcacgcgcagggctacggcgattgcttcga	Protospacer
********* *** ********* *.. *. *

39. spacer 1.7|1030245|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_012732 (Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence) position: , mismatch: 8, identity: 0.75

acaaggatattctcgtctacgttatccagttc	CRISPR spacer
atctgataattctcgtctagtttatccagttc	Protospacer
*.  *.  ***********  ***********

40. spacer 1.8|1030306|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

gccgacgccatccggatagcgctgtcagctgc	CRISPR spacer
ccggacgccatccggaaagcactgtcgtcgga	Protospacer
 * ************* ***.*****. * *

41. spacer 1.13|1030611|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gagatcgacctctcccatgttgtgccggttac	CRISPR spacer
aagatcgaccgcacccatgttgtgaccgatga	Protospacer
.********* * *********** * * *.

42. spacer 2.7|1048287|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_048170 (Escherichia phage vB_EcoM_Goslar, complete genome) position: , mismatch: 8, identity: 0.75

cgcttcatcgacagcgtgttgtcgcggtgctt	CRISPR spacer
atgaacatcgacttcgtgttgtcgcggtgctg	Protospacer
     *******  *****************

43. spacer 2.15|1048775|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MH622929 (Microviridae sp. isolate ctei769, complete genome) position: , mismatch: 8, identity: 0.75

cgcgccaccgagctattcgggccgctcggttc	CRISPR spacer
cccgccgccgagatattcgggccgctgtaggc	Protospacer
* ****.***** *************  .  *

44. spacer 2.15|1048775|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MH992199 (Apis mellifera associated microvirus 39 isolate INH_SP_224, complete genome) position: , mismatch: 8, identity: 0.75

cgcgccaccgagctattcgggccgctcggttc	CRISPR spacer
tccgccgccgaggtattcgggccgctggagcc	Protospacer
. ****.***** ************* *. .*

45. spacer 2.15|1048775|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MG945537 (UNVERIFIED: Microviridae sp. isolate 2415-180101, complete genome) position: , mismatch: 8, identity: 0.75

cgcgccaccgagctattcgggccgctcggttc	CRISPR spacer
agagccgccgagatattcgggccgctgcatac	Protospacer
 * ***.***** *************  .* *

46. spacer 2.15|1048775|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MG945914 (UNVERIFIED: Microviridae sp. isolate 8858-1602, partial genome) position: , mismatch: 8, identity: 0.75

cgcgccaccgagctattcgggccgctcggttc	CRISPR spacer
agagccaccgagatattcaggccgctggagac	Protospacer
 * ********* *****.******* *.  *

47. spacer 2.18|1048958|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034151 (Pantoea agglomerans strain L15 plasmid pPagL15_3, complete sequence) position: , mismatch: 8, identity: 0.75

aatccacatcctgtttagctccatatagcccc	CRISPR spacer
cagccacatcctgttgagttccatatattctt	Protospacer
 * ************ **.******** .*..

48. spacer 2.19|1049019|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016082 (Streptomyces sp. SAT1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaatttctccgcgaacgcccaccagtcgcg	CRISPR spacer
gggaatttctccgggaccgcccaccaactggg	Protospacer
  *********** ** *********...* *

49. spacer 2.21|1049141|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MN693021 (Marine virus AFVG_117M32, complete genome) position: , mismatch: 8, identity: 0.75

tcgttttttttatcggtgtggttcggtcgtaa	CRISPR spacer
acgactgaattatcggtgcggtttggtcgtaa	Protospacer
 ** .*   *********.****.********

50. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026494 (Escherichia coli strain HS13-1 plasmid pHS13-1-IncF, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

51. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU664810 (Escherichia coli strain 11.3-R3 plasmid pCERC5, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

52. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY007017 (Escherichia coli strain 14.3-R4 plasmid pCERC9, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

53. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to KR827684 (Escherichia coli plasmid pCERC3, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

54. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP119165 (Escherichia coli strain QT598 plasmid pEC598, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

55. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP398867 (Escherichia coli strain DB04277 plasmid pDB4277, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

56. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010147 (Escherichia coli strain D5 plasmid B, complete genome) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

57. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010232 (Escherichia coli strain S30 plasmid A, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

58. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017611 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

59. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010158 (Escherichia coli strain D10 plasmid A, complete genome) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

60. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043952 (Escherichia coli strain ST95-32 plasmid pST95-32-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

61. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010141 (Escherichia coli strain D3 plasmid A, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

62. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049349 (Escherichia coli strain 3R plasmid p3R-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

63. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038182 (Escherichia coli strain 2 HS-C plasmid p2HS-C-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

64. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021087 (Escherichia coli strain 13P460A plasmid p13P460A-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

65. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053732 (Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

66. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020546 (Escherichia coli strain ZJ3920 plasmid pZJ3920-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

67. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to CP043737 (Escherichia coli strain CVM N17EC0616 plasmid pN17EC0616-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

68. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010316 (Escherichia coli strain 789 plasmid pAPEC-O78-ColV) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

69. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LS992167 (Escherichia coli isolate Escherichia coli str. TO6 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

70. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019282 (Escherichia coli strain 13P484A plasmid p13P484A-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

71. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034739 (Escherichia coli strain L65 plasmid pL65-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

72. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054369 (Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

73. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048296 (Escherichia coli strain CVM N18EC0432 plasmid pN18EC0432-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

74. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019251 (Escherichia coli strain 13KWH46 plasmid p13KWH46-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

75. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021728 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

76. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP005931 (Escherichia coli APEC IMT5155 plasmid p1ColV5155, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

77. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026854 (Escherichia coli strain MS7163 plasmid pMS7163A, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

78. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019247 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

79. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019268 (Escherichia coli strain 13C1079T plasmid p13C1079T-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

80. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029243 (Escherichia coli strain ECCRA-119 plasmid pTB201, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

81. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to CM019851 (Escherichia coli strain CVM N17EC0326 plasmid pN17EC0326-1, complete sequence, whole genome shotgun sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

82. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049355 (Escherichia coli strain T28R plasmid pT28R-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

83. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033091 (Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

84. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to LT906556 (Escherichia coli isolate E. coli RL465 genome assembly, plasmid: I) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

85. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032263 (Escherichia coli strain AR_0089 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

86. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027357 (Escherichia coli strain 2013C-4991 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

87. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019018 (Escherichia coli strain Ecol_244 plasmid pEC244_2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

88. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019007 (Escherichia coli strain Ecol_AZ159 plasmid pECAZ159_1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

89. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011916 (Escherichia coli strain PSUO2 plasmid pPSUO2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

90. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019456 (Escherichia coli strain FHI_NMBU_03 plasmid pFHI_NMBU_03_1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

91. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018994 (Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

92. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047878 (Escherichia coli strain LD22-1 plasmid pLD22-1-135kb, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

93. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046718 (Escherichia coli strain T16R plasmid pT16R-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

94. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041303 (Escherichia coli strain MSHS 133 plasmid pCys-11, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

95. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_011964 (Escherichia coli plasmid pAPEC-O103-ColBM, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

96. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012636 (Escherichia coli strain SF-088 plasmid pSF-088-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

97. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022731 (Escherichia coli strain SA186 plasmid pSA186_2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

98. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022732 (Escherichia coli strain SA186 plasmid pSA186_3, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

99. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985319 (Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_pII) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

100. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019676 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

101. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_024956 (Escherichia coli strain K-12 plasmid pDM0133, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

102. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_025179 (Escherichia coli plasmid pC59-153, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

103. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to CP042897 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_01, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

104. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051689 (Escherichia coli strain SCU-387 plasmid pSCU-387-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

105. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012377 (Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

106. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to KU932025 (Escherichia coli plasmid pEC14I, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

107. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_025175 (Escherichia coli plasmid pH2332-166, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

108. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_025139 (Escherichia coli plasmid pH2291-144, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

109. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LS992172 (Escherichia coli isolate Escherichia coli str. TO73 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

110. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041301 (Escherichia coli strain MSHS 472 plasmid pCys-6, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

111. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to CP054455 (Escherichia coli strain SCU-487 plasmid pSCU-487-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

112. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022166 (Escherichia coli strain M160133 plasmid pM160133_p2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

113. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047577 (Escherichia coli strain 94EC plasmid p94EC-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

114. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to KU578032 (Escherichia coli plasmid pCERC4, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

115. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026643 (Escherichia coli strain FORC_082 plasmid pFORC82_2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

116. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042586 (Escherichia coli strain LD91-1 plasmid pLD91-1-146kb, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

117. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023363 (Escherichia coli strain 144 plasmid 134q, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

118. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023367 (Escherichia coli strain 1428 plasmid p111, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

119. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023384 (Escherichia coli strain 1223 plasmid p147, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

120. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_010409 (Escherichia coli plasmid pVM01, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

121. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to CP043743 (Escherichia coli strain CVM N17EC0211 plasmid pN17EC0211, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

122. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MN419430 (Escherichia coli strain 2016-4017437 plasmid p17437, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

123. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020934 (Escherichia coli strain HB-Coli0 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

124. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR025097 (Escherichia coli isolate EC-7215 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

125. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_011980 (Escherichia coli chi7122 plasmid pAPEC-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

126. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030791 (Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211A-ColV, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

127. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053282 (Escherichia coli strain SCU-308 plasmid pSCU-308-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

128. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_020271 (Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

129. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MN848327 (Escherichia coli strain T16RC plasmid pT16RC-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

130. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MN823988 (Escherichia coli strain 14406 plasmid p14406-FII, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

131. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR740777 (Escherichia coli strain BEN2908 isolate 1 day old chicken plasmid pAPEC2908) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

132. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047667 (Escherichia coli strain LD26-1 plasmid pLD26-1-135kb, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

133. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041299 (Escherichia coli O1:H42 strain CLSC36 plasmid pCys-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

134. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031107 (Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

135. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR740759 (Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

136. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012113 (Escherichia coli strain PSUO78 plasmid pPSUO78_1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

137. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019055 (Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

138. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048026 (Escherichia coli strain GZEC065 plasmid pTEM1-GZEC065, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

139. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029744 (Escherichia coli strain AR_0085 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

140. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to LC484363 (Escherichia coli C1 plasmid pColV-C1 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

141. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041920 (Escherichia coli strain Ec40743 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

142. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051224 (Escherichia coli strain SCZE5 plasmid pSCZE2) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

143. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_007675 (Escherichia coli A2363 plasmid pAPEC-O2-ColV, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

144. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_018954 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

145. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_018966 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

146. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014489 (Escherichia coli strain G749 plasmid pG749_1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

147. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to CP027485 (Escherichia coli strain 2013C-4390 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

148. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024140 (Escherichia coli strain 14EC020 plasmid p14EC020b, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

149. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_011747 (Escherichia coli S88 plasmid pECOS88, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

150. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049102 (Escherichia coli strain EC28 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

151. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_017659 (Escherichia coli O83:H1 str. NRG 857C plasmid pO83_CORR, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

152. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026940 (Escherichia coli strain CFS3313 plasmid pCFS3313-1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

153. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042245 (Escherichia coli strain PU-1 plasmid pColV-PU1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

154. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025403 (Escherichia coli strain MS8345 plasmid pMS8345B, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

155. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985293 (Escherichia coli strain 4410-1 plasmid RCS79_p, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

156. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MN807689 (Escherichia coli strain A241 plasmid pA241-TEM, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

157. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK430046 (Escherichia coli strain 11.4-R4 plasmid pCERC13, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

158. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK461929 (Escherichia coli strain 2009_36 plasmid p2009_36_F, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

159. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK416151 (Escherichia coli strain 6TC9eCTX plasmid pHNTC9e, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

160. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK461928 (Escherichia coli strain F2_14D plasmid pF2_14D_F, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

161. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK878891 (Escherichia coli strain J53 plasmid pMG336, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

162. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK878890 (Escherichia coli strain J53 plasmid pMG337, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

163. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN053930 (Escherichia coli strain 2.3-R4 plasmid pCERC14, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

164. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH422552 (Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

165. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH580302 (Escherichia coli strain 1107 plasmid p1107-118K, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

166. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006635 (Escherichia coli PCN033 plasmid p3PCN033, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

167. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG014722 (Escherichia coli strain P2-3 plasmid pP2-3T, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

168. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF474175 (Escherichia coli strain J53/pNIT-HK plasmid pNIT-HK, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

169. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG825372 (Escherichia coli strain 1106 plasmid p1106-IncFIB, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

170. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

171. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG825378 (Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

172. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF174860 (Escherichia coli strain 6/14/6b plasmid pIncF-MU4, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

173. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG385063 (Escherichia coli strain WF5-29 plasmid pWF5-29, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

174. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG838205 (Escherichia coli strain 92944 plasmid p92944-mph, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

175. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH195200 (Escherichia coli strain 2009-52 plasmid pSDJ2009-52F, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

176. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025329 (Escherichia coli strain ExPEC XM plasmid unnamed) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

177. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_023327 (Escherichia coli ACN001 plasmid pACN001-B, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

178. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to CP043741 (Escherichia coli strain CVM N17EC0320 plasmid pN17EC0320-2, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

179. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MN816372 (Escherichia coli strain A130 plasmid pA130-TEM, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

180. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_009837 (Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence) position: , mismatch: 8, identity: 0.75

gatcatcacccaggcattttctg-gaatatgaa	CRISPR spacer
gaccatcacccaggcgttttctgccagcgtca-	Protospacer
**.************.*******  *...* *

181. spacer 2.30|1049690|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to KM389216 (UNVERIFIED: Pseudomonas phage F_ET605sp/Pa1651 clone contig00001 genomic sequence) position: , mismatch: 8, identity: 0.75

aatcccgatgatcatgaatatttctggcgcca	CRISPR spacer
aatcccgatgatcacgaataattcaaaggctc	Protospacer
**************.***** *** .. **.

182. spacer 1.1|1029879|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 9, identity: 0.719

gggcacgcggaggtctacggcgaatatattta	CRISPR spacer
gttcacgcggaggtcaagggcgaatacggctg	Protospacer
*  ************ * ********.. .*.

183. spacer 1.7|1030245|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015253 (Bacillus thuringiensis Bt18247 plasmid p113275, complete sequence) position: , mismatch: 9, identity: 0.719

acaaggatattctcgtctacgttatccagttc	CRISPR spacer
tcaagggttttctcgtctacgttacgtaaagc	Protospacer
 *****.* ***************. .*.  *

184. spacer 1.8|1030306|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_009235 (Burkholderia phage phi644-2 chromosome, complete genome) position: , mismatch: 9, identity: 0.719

gccgacgccatccggatagcgctgtcagctgc--	CRISPR spacer
gccgccgccttccggatagcgc--tcgaacaccg	Protospacer
**** **** ************  **.. ..*

185. spacer 1.8|1030306|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to CP000625 (Burkholderia phage phi644-2, complete genome) position: , mismatch: 9, identity: 0.719

gccgacgccatccggatagcgctgtcagctgc--	CRISPR spacer
gccgccgccttccggatagcgc--tcgaacaccg	Protospacer
**** **** ************  **.. ..*

186. spacer 1.8|1030306|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_005284 (Burkholderia phage phi1026b, complete genome) position: , mismatch: 9, identity: 0.719

gccgacgccatccggatagcgctgtcagctgc--	CRISPR spacer
gccgccgccttccggatagcgc--tcgaacaccg	Protospacer
**** **** ************  **.. ..*

187. spacer 1.8|1030306|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to AF447491 (Bacteriophage phiE125, complete genome) position: , mismatch: 9, identity: 0.719

gccgacgccatccggatagcgctgtcagctgc--	CRISPR spacer
gccgccgccttccggatagcgc--tcgaacaccg	Protospacer
**** **** ************  **.. ..*

188. spacer 1.8|1030306|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to AY453853 (Bacteriophage phi1026b, complete genome) position: , mismatch: 9, identity: 0.719

gccgacgccatccggatagcgctgtcagctgc--	CRISPR spacer
gccgccgccttccggatagcgc--tcgaacaccg	Protospacer
**** **** ************  **.. ..*

189. spacer 1.8|1030306|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_003309 (Burkholderia phage phiE125, complete genome) position: , mismatch: 9, identity: 0.719

gccgacgccatccggatagcgctgtcagctgc--	CRISPR spacer
gccgccgccttccggatagcgc--tcgaacaccg	Protospacer
**** **** ************  **.. ..*

190. spacer 1.11|1030489|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MT818420 (Microbacterium phage Gilda, complete genome) position: , mismatch: 9, identity: 0.719

tgtccaccggcacgacctattccaacagcgcc	CRISPR spacer
aggagttcggcacgagctactccaacagcgtc	Protospacer
 *    .******** ***.**********.*

191. spacer 1.11|1030489|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MK737941 (Microbacterium phage Rachella, complete genome) position: , mismatch: 9, identity: 0.719

tgtccaccggcacgacctattccaacagcgcc	CRISPR spacer
aggagttcggcacgagctactccaacagcgtc	Protospacer
 *    .******** ***.**********.*

192. spacer 1.11|1030489|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MT522001 (Microbacterium phage Karate, complete genome) position: , mismatch: 9, identity: 0.719

tgtccaccggcacgacctattccaacagcgcc	CRISPR spacer
aggagttcggcacgagctactccaacagcgtc	Protospacer
 *    .******** ***.**********.*

193. spacer 1.11|1030489|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MK801732 (Microbacterium phage NarutoRun, complete genome) position: , mismatch: 9, identity: 0.719

tgtccaccggcacgacctattccaacagcgcc	CRISPR spacer
aggagttcggcacgagctactccaacagcgtc	Protospacer
 *    .******** ***.**********.*

194. spacer 1.11|1030489|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_047986 (Microbacterium phage Krampus, complete genome) position: , mismatch: 9, identity: 0.719

tgtccaccggcacgacctattccaacagcgcc	CRISPR spacer
aggagttcggcacgagctactccaacagcgtc	Protospacer
 *    .******** ***.**********.*

195. spacer 1.11|1030489|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MK801731 (Microbacterium phage Anakin, complete genome) position: , mismatch: 9, identity: 0.719

tgtccaccggcacgacctattccaacagcgcc	CRISPR spacer
aggagttcggcacgagctactccaacagcgtc	Protospacer
 *    .******** ***.**********.*

196. spacer 1.11|1030489|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MH271292 (Microbacterium phage AnnaSerena, complete genome) position: , mismatch: 9, identity: 0.719

tgtccaccggcacgacctattccaacagcgcc	CRISPR spacer
aggagttcggcacgagctactccaacagcgtc	Protospacer
 *    .******** ***.**********.*

197. spacer 2.8|1048348|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 9, identity: 0.719

gtgggatggaaaaaatgggagccagttttaaa	CRISPR spacer
atcaaagcgaaaaaatggcagcgagttttaat	Protospacer
.* ..*  ********** *** ********

198. spacer 2.8|1048348|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to AJ312240 (Bacteriophage PSA complete genome) position: , mismatch: 9, identity: 0.719

gtgggatggaaaaaatgggagccagttttaaa	CRISPR spacer
atcaaagcgaaaaaatggcagcgagttttaat	Protospacer
.* ..*  ********** *** ********

199. spacer 2.8|1048348|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 9, identity: 0.719

gtgggatggaaaaaatgggagccagttttaaa	CRISPR spacer
atcaaagcgaaaaaatggcagctagttttaat	Protospacer
.* ..*  ********** ***.********

200. spacer 2.12|1048592|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gctgatatccgcctgattggtgatctgcgtcg	CRISPR spacer
cggcgtatccgcctgattgatgatctccgtgc	Protospacer
    .**************.****** ***

201. spacer 2.15|1048775|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MH617086 (Microviridae sp. isolate ctcc904, complete genome) position: , mismatch: 9, identity: 0.719

cgcgccaccgagctattcgggccgctcggttc	CRISPR spacer
accgccaccgagatattcggggcgctgcaaac	Protospacer
  ********** ******** ****  .  *

202. spacer 2.20|1049080|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023779 (Nocardia terpenica strain NC_YFY_NT001 plasmid p_NC_YFY_NT001, complete sequence) position: , mismatch: 9, identity: 0.719

agttcgccagcggtgcccgcgatctggagctg	CRISPR spacer
gcgccgcccgcgctgcccgcgatctggagacc	Protospacer
.  .**** *** **************** .

203. spacer 2.20|1049080|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053858 (Rhizobium pusense strain 76 plasmid pR76, complete sequence) position: , mismatch: 9, identity: 0.719

agttcgccagcggtgcccgcgatctggagctg	CRISPR spacer
tctacgccaacggtgcccgcgatgtgggcaag	Protospacer
  * *****.************* ***.   *

204. spacer 2.25|1049385|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054025 (Rhizobium sp. JKLM12A2 plasmid pPR12A204, complete sequence) position: , mismatch: 9, identity: 0.719

tgcggccacgcccgcgtagcagatagccgcca	CRISPR spacer
gggtcgtgcgcccgcgtagcagatcgccgaca	Protospacer
 *    ..**************** **** **

205. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to KY554763 (Lactococcus phage LW32, complete genome) position: , mismatch: 9, identity: 0.719

gatcatcacccaggcattttctggaatatgaa	CRISPR spacer
tcttatcacccattcattttctggaatgctat	Protospacer
  *.********  *************.. *

206. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_049806 (Lactococcus phage LW31, complete genome) position: , mismatch: 9, identity: 0.719

gatcatcacccaggcattttctggaatatgaa	CRISPR spacer
tcttatcacccattcattttctggaatgctat	Protospacer
  *.********  *************.. *

207. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MN855809 (Siphoviridae sp. isolate 134, complete genome) position: , mismatch: 9, identity: 0.719

gatcatcacccaggcattttctggaatatgaa	CRISPR spacer
tcttatcacccattcattttctggaatgctat	Protospacer
  *.********  *************.. *

208. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to KY554765 (Lactococcus phage LW4, complete genome) position: , mismatch: 9, identity: 0.719

gatcatcacccaggcattttctggaatatgaa	CRISPR spacer
tcttatcacccattcattttctggaatgctat	Protospacer
  *.********  *************.. *

209. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MN528768 (Lactococcus phage P596, complete genome) position: , mismatch: 9, identity: 0.719

gatcatcacccaggcattttctggaatatgaa	CRISPR spacer
tcttatcacccattcattttctggaatgctat	Protospacer
  *.********  *************.. *

210. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to KY554764 (Lactococcus phage LW33, complete genome) position: , mismatch: 9, identity: 0.719

gatcatcacccaggcattttctggaatatgaa	CRISPR spacer
tcttatcacccattcattttctggaatgctat	Protospacer
  *.********  *************.. *

211. spacer 2.29|1049629|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NC_049805 (Lactococcus phage phiQ1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

gatcatcacccaggcattttctggaatatgaa	CRISPR spacer
tcttatcacccattcattttctggaatgctat	Protospacer
  *.********  *************.. *

212. spacer 1.18|1030916|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 10, identity: 0.688

cagtaattgaggcaattagcgcggccggcatc	CRISPR spacer
gcgccgaaaaggcaatcagcgcggcctgcatc	Protospacer
  *. .  .*******.********* *****

213. spacer 1.21|1031099|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 10, identity: 0.688

cctataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 ..*  .************  *********

214. spacer 1.21|1031099|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

cctataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 ..*  .************  *********

215. spacer 2.12|1048592|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_014304 (Erwinia billingiae Eb661 plasmid pEB102, complete sequence) position: , mismatch: 10, identity: 0.688

gctgatatccgcctgattggtgatctgcgtcg	CRISPR spacer
gctgaaatccgcctgatcggtgagggacagtc	Protospacer
***** ***********.*****   .*. .

216. spacer 2.13|1048653|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.688

ctggcgcaggttcgcctttcgggcctttgagt	CRISPR spacer
atggcgcaggtacgccttgcgggcgaggcggc	Protospacer
 ********** ****** *****     .*.

217. spacer 2.13|1048653|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.688

ctggcgcaggttcgcctttcgggcctttgagt	CRISPR spacer
atggcgcaggtacgccttgcgggcgaggcggc	Protospacer
 ********** ****** *****     .*.

218. spacer 2.13|1048653|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 10, identity: 0.688

ctggcgcaggttcgcctttcgggcctttgagt	CRISPR spacer
atggcgcaggtacgccttgcgggcgaggcggc	Protospacer
 ********** ****** *****     .*.

219. spacer 2.15|1048775|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MG945415 (UNVERIFIED: Microviridae sp. isolate 4165-1801, complete genome) position: , mismatch: 10, identity: 0.688

cgcgccaccgagctattcgggccgctcggttc	CRISPR spacer
gttgccaccgagatattcgggacgctgaaggc	Protospacer
  .********* ******** **** ..  *

220. spacer 2.15|1048775|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to MG883717 (Microviridae sp. isolate Pig79-2, complete genome) position: , mismatch: 10, identity: 0.688

cgcgccaccgagctattcgggccgctcggttc	CRISPR spacer
gttgccaccgagatattcgggacgctgaaggc	Protospacer
  .********* ******** **** ..  *

221. spacer 2.16|1048836|32|NZ_CP043509|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028965 (Burkholderia sp. IDO3 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

ggattttatgacgactggccgaaatcgtacaa	CRISPR spacer
ttgttttatgccgactggccggaatcaattta	Protospacer
  .******* **********.****.  . *

222. spacer 2.23|1049263|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to MW149101 (Microvirus sp. isolate gila4, complete genome) position: , mismatch: 10, identity: 0.688

acagaccagacaaataacgtattttctgttga	CRISPR spacer
ccctctcagacaaataatatattttctgtcac	Protospacer
 *   .***********..**********..

223. spacer 2.28|1049568|32|NZ_CP043509|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN997849 (Magnetospirillum sp. XM-1 isolate XM1 plasmid II, complete sequence) position: , mismatch: 10, identity: 0.688

tcgcttatcttgaaatcgtcatcggtcagacc	CRISPR spacer
gtgcttatcaggaaatcgtcatcggccgcgag	Protospacer
 .*******  **************.*. .

224. spacer 2.31|1049751|32|NZ_CP043509|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

aggggcgttccgcagtcggcaagggctgaaaa	CRISPR spacer
tcgggcatcccgcagtcggcaagggtgcggcg	Protospacer
  ****.*.****************.  .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

293809 : 315601

Salmonella_phage(66.67%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000090707.1\|293809_294652_+\|transposase	transposase	NA	NA	NA	NA
WP_000351437.1\|294638_296762_+\|transposase	transposase	NA	NA	NA	NA
WP_001049180.1\|296761_298210_+	ATP-binding protein	NA	NA	NA	NA
WP_001324699.1\|298250_299807_+\|transposase	transposase	NA	NA	NA	NA
WP_000262423.1\|299818_300745_+	hypothetical protein	NA	NA	NA	NA
WP_001097216.1\|301097_301397_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000124023.1\|301668_304656_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.7e-295	53.5
WP_001089729.1\|305355_306489_-	permease	NA	NA	NA	NA
WP_050901219.1\|306594_306909_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001351729.1\|308660_309053_+	cysteine hydrolase	NA	NA	NA	NA
WP_000058717.1\|309190_310075_+	EamA family transporter	NA	NA	NA	NA
WP_000804064.1\|310106_311306_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
WP_039045916.1\|311411_312047_+	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA
WP_112324593.1\|312185_314891_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	74.3
WP_001067855.1\|314896_315601_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_2

1212720 : 1290599

Salmonella_phage(87.5%)

plate,holin,integrase,transposase,capsid,portal,head,terminase,tRNA,tail

attL 1225519:1225563|attR 1261609:1261653

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095055964.1\|1212720_1213832_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	4.9e-06	25.0
WP_023138944.1\|1214004_1214442_-	hypothetical protein	NA	NA	NA	NA
WP_023138943.1\|1214657_1215830_-	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_023138942.1\|1215850_1216771_-	hypothetical protein	NA	NA	NA	NA
WP_135733575.1\|1217051_1217342_+	hypothetical protein	NA	NA	NA	NA
WP_139760054.1\|1217420_1217966_+	hypothetical protein	NA	NA	NA	NA
WP_139760055.1\|1218315_1219302_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_135733578.1\|1219276_1220758_+	hypothetical protein	NA	NA	NA	NA
WP_112324634.1\|1220750_1221746_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_162623953.1\|1222499_1224029_+	histidine kinase	NA	NA	NA	NA
WP_033903661.1\|1224123_1225353_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	2.0e-210	88.5
1225519:1225563	attL	NA	NA	NA	NA
WP_001536726.1\|1225680_1226706_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	9.9e-203	100.0
WP_000616878.1\|1226709_1227342_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.1e-116	100.0
WP_000102102.1\|1227461_1227704_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	1.1e-38	100.0
WP_000460858.1\|1227736_1228246_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.6e-89	100.0
WP_023138936.1\|1228253_1228454_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	1.6e-32	98.5
WP_000963479.1\|1228417_1228759_+	DUF5347 domain-containing protein	A0A1S6L019	Salmonella_phage	4.6e-56	99.1
WP_023138935.1\|1228826_1229060_+	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	3.7e-25	83.1
WP_000785510.1\|1229059_1229287_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	1.0e-35	94.7
WP_001090717.1\|1229283_1229868_+	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	1.1e-76	73.7
WP_023138934.1\|1229864_1230725_+	DNA adenine methylase	E5G6L8	Salmonella_phage	3.4e-132	81.1
WP_023138933.1\|1230715_1233145_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	91.8
WP_023138932.1\|1233298_1233487_+	hypothetical protein	E5G6M0	Salmonella_phage	4.6e-26	95.2
WP_001217575.1\|1233497_1233731_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_000700647.1\|1233844_1234522_+	hypothetical protein	NA	NA	NA	NA
WP_001655629.1\|1234873_1235980_+	hypothetical protein	NA	NA	NA	NA
WP_024138933.1\|1235992_1236427_+	hypothetical protein	NA	NA	NA	NA
WP_023138931.1\|1236426_1237092_+	hypothetical protein	NA	NA	NA	NA
WP_023138930.1\|1237161_1238196_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	5.5e-177	91.0
WP_023138929.1\|1238195_1239962_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.8
WP_023138928.1\|1240104_1240938_+\|capsid	GPO family capsid scaffolding protein	E5G6M5	Salmonella_phage	6.9e-130	99.6
WP_023138927.1\|1240954_1242019_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	2.7e-195	99.4
WP_023138926.1\|1242022_1242673_+\|terminase	phage terminase	A0A1S6KZX1	Salmonella_phage	3.2e-114	99.5
WP_000673535.1\|1242766_1243231_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-84	98.1
WP_023138925.1\|1243230_1243434_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	2.5e-33	98.5
WP_023138924.1\|1243437_1243653_+\|holin	holin family protein	E5G6N0	Salmonella_phage	1.3e-32	98.6
WP_001069919.1\|1243633_1244143_+	lysozyme	A0A1S6KZY9	Salmonella_phage	2.2e-94	98.8
WP_000731036.1\|1244147_1244525_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	8.1e-62	100.0
WP_024133383.1\|1244521_1244950_+	hypothetical protein	A0A1S6KZX8	Salmonella_phage	1.5e-67	98.6
WP_001039961.1\|1245045_1245477_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.1e-75	99.3
WP_023138923.1\|1245469_1245916_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.5e-59	80.4
WP_023138922.1\|1245934_1247026_+	DUF262 domain-containing protein	A0A0R6PKN1	Moraxella_phage	1.4e-18	31.2
WP_024148874.1\|1247027_1247672_+	hypothetical protein	NA	NA	NA	NA
WP_001672413.1\|1247745_1248324_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-108	100.0
WP_000177408.1\|1248320_1248680_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	6.8e-58	96.6
WP_023138920.1\|1248666_1249575_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.2e-158	99.3
WP_023138919.1\|1249567_1250173_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	5.8e-118	99.0
WP_023262363.1\|1250169_1251825_+\|tail	phage tail fiber protein	A0A1S6KZZ8	Salmonella_phage	0.0e+00	98.9
WP_023138916.1\|1251827_1252367_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	6.1e-95	97.2
WP_077908642.1\|1252370_1252988_-\|tail	phage tail protein	A0A1S6KZY8	Salmonella_phage	1.4e-111	98.5
WP_023262362.1\|1252957_1253947_-	hypothetical protein	A0A1S6KZZ0	Salmonella_phage	4.3e-187	95.7
WP_001165558.1\|1253976_1254534_+	serine-type DNA invertase Fin	A0A1S6L009	Salmonella_phage	5.5e-99	98.4
WP_023138915.1\|1254636_1255809_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.3e-222	99.5
WP_001207653.1\|1255818_1256334_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	2.7e-92	99.4
WP_001280967.1\|1256388_1256691_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	9.4e-45	99.0
WP_000763316.1\|1256705_1256825_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.8e-15	100.0
WP_023138914.1\|1256817_1259625_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	99.0
WP_023138913.1\|1259621_1260107_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-71	93.8
WP_023138912.1\|1260103_1261204_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	2.4e-194	98.6
WP_000980498.1\|1261272_1261491_+	hypothetical protein	Q53ZE7	Salmonella_virus	2.1e-38	100.0
WP_075321944.1\|1262042_1263206_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
1261609:1261653	attR	NA	NA	NA	NA
WP_023138910.1\|1263213_1265394_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	9.9e-19	34.0
WP_112324624.1\|1265390_1266800_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_112324625.1\|1266864_1278339_-	biofilm-associated protein BapA	NA	NA	NA	NA
WP_001518569.1\|1278953_1279436_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
WP_000242603.1\|1279585_1280062_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_001112990.1\|1280051_1280342_+	RnfH family protein	NA	NA	NA	NA
WP_001203445.1\|1280507_1280846_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_000880965.1\|1280994_1282656_-	DNA repair protein RecN	NA	NA	NA	NA
WP_001059155.1\|1282741_1283620_-	NAD(+) kinase	NA	NA	NA	NA
WP_023138907.1\|1283743_1284334_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001287923.1\|1284368_1284974_-	hypothetical protein	NA	NA	NA	NA
WP_127172650.1\|1285094_1286381_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001537507.1\|1286400_1287192_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_000460052.1\|1287357_1288719_+	signal recognition particle protein	NA	NA	NA	NA
WP_000256453.1\|1288971_1289220_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_000043266.1\|1289238_1289787_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000469813.1\|1289831_1290599_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_3

1547374 : 1590361

Salmonella_phage(67.8%)

lysis,integrase,transposase,coat,portal

attL 1569240:1569256|attR 1590643:1590659

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001208732.1\|1547374_1547578_-	hypothetical protein	C6ZR24	Salmonella_phage	2.7e-32	97.0
WP_023138683.1\|1547674_1548049_-	hypothetical protein	A0A1V0E5M6	Salmonella_phage	2.0e-65	100.0
WP_023138681.1\|1548292_1548559_-	hypothetical protein	A0A1V0E5L9	Salmonella_phage	1.5e-46	100.0
WP_023138676.1\|1550678_1550849_-	DUF2737 family protein	I6S642	Salmonella_phage	4.8e-22	92.9
WP_017441417.1\|1550859_1551153_-	DUF2856 family protein	A0A2H4FNA1	Salmonella_phage	1.4e-48	96.9
WP_001253476.1\|1551199_1551484_-	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_023138675.1\|1551483_1552191_-	hypothetical protein	I6R0N0	Salmonella_phage	7.2e-120	88.5
WP_000613174.1\|1552198_1552387_-	hypothetical protein	C6ZR38	Salmonella_phage	1.7e-23	82.3
WP_001181693.1\|1552474_1552669_-	hypothetical protein	NA	NA	NA	NA
WP_000983401.1\|1552653_1552788_-	hypothetical protein	K7PHK2	Enterobacteria_phage	2.8e-09	75.6
WP_000401881.1\|1552873_1553128_-	hypothetical protein	NA	NA	NA	NA
WP_112324622.1\|1553300_1553801_-	HNH endonuclease	A5H1L2	Xanthomonas_virus	5.2e-32	44.5
WP_000213981.1\|1553884_1554079_-	Restriction inhibitor protein ral	E7C9Q6	Salmonella_phage	2.5e-30	100.0
WP_000216184.1\|1554157_1554493_-	hypothetical protein	Q5G8T5	Enterobacteria_phage	5.0e-47	86.9
WP_125866875.1\|1554513_1554696_-	hypothetical protein	A0A220NQW5	Salmonella_phage	6.3e-28	96.7
WP_001297096.1\|1554871_1555651_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	4.5e-139	99.6
WP_000255946.1\|1555650_1556673_-\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	4.6e-200	99.4
WP_162623949.1\|1556686_1556992_-	hypothetical protein	NA	NA	NA	NA
WP_020838491.1\|1557047_1557392_+	hypothetical protein	NA	NA	NA	NA
WP_023253052.1\|1557427_1558351_-	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	5.1e-174	94.5
WP_020838493.1\|1558462_1559095_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	1.3e-32	37.4
WP_020838494.1\|1559193_1559412_+	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	4.9e-19	67.6
WP_000424167.1\|1559520_1559799_+	transcriptional regulator	Q5G8T2	Enterobacteria_phage	2.5e-44	100.0
WP_001125981.1\|1559833_1559980_+	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_000067077.1\|1559972_1560806_+	replication protein	A0A1R3Y5R9	Salmonella_virus	4.2e-151	99.3
WP_112324612.1\|1560802_1562179_+	AAA family ATPase	Q76H51	Enterobacteria_phage	1.8e-252	99.3
WP_020898888.1\|1562175_1562445_+	hypothetical protein	I6S1N5	Salmonella_phage	3.2e-44	97.8
WP_058115773.1\|1562516_1562798_+	DUF4752 family protein	A0A220NQX8	Salmonella_phage	9.1e-42	100.0
WP_000344577.1\|1563018_1563270_+	hypothetical protein	A0A220NQX3	Salmonella_phage	2.9e-23	65.5
WP_024150883.1\|1563272_1563569_+	hypothetical protein	E7C9R7	Salmonella_phage	2.6e-47	99.0
WP_112324613.1\|1563525_1563972_+	recombination protein NinB	I6R0N7	Salmonella_phage	1.2e-80	99.3
WP_024147316.1\|1563968_1564142_+	hypothetical protein	Q8HAF7	Salmonella_phage	3.4e-31	98.2
WP_000113766.1\|1564108_1564291_+	NinE family protein	C6ZR57	Salmonella_phage	5.7e-29	100.0
WP_020898882.1\|1564287_1564458_+	NinF family protein	I6R994	Salmonella_phage	2.4e-21	83.3
WP_001749499.1\|1564450_1564687_+	hypothetical protein	C6ZR59	Salmonella_phage	3.4e-34	88.5
WP_020898881.1\|1564667_1565138_+	hypothetical protein	C6ZR60	Salmonella_phage	6.3e-88	96.2
WP_023138244.1\|1565125_1565308_+	hypothetical protein	C6ZR61	Salmonella_phage	4.2e-24	96.7
WP_001235461.1\|1565304_1565928_+	antitermination protein	K7PM87	Enterobacteria_phage	3.0e-114	100.0
WP_000286100.1\|1566602_1566806_+	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
WP_112324617.1\|1566783_1567281_+	lysozyme	A0A1R3Y5W5	Salmonella_virus	4.2e-90	98.2
WP_023253534.1\|1567369_1567837_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	1.9e-68	88.4
WP_001530409.1\|1568046_1568544_+	DNA-binding protein	A0A1V0E5R9	Salmonella_phage	1.4e-93	100.0
WP_001283924.1\|1568540_1568798_+	hypothetical protein	A0A1V0E5Q1	Salmonella_phage	3.8e-39	100.0
WP_000807788.1\|1569093_1569336_+	DUF2560 family protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
1569240:1569256	attL	NA	NA	NA	NA
WP_001140559.1\|1569339_1569729_+	hypothetical protein	C6ZR72	Salmonella_phage	3.3e-74	98.4
WP_000013070.1\|1569728_1570133_+	hypothetical protein	C6ZR73	Salmonella_phage	1.7e-65	98.5
WP_000729924.1\|1570136_1570625_+	hypothetical protein	A8CGG1	Salmonella_phage	2.9e-88	100.0
WP_017441431.1\|1570602_1572102_+	DNA packaging protein	A0A0M4S5Z3	Salmonella_phage	3.1e-306	99.6
WP_023138248.1\|1572101_1574279_+\|portal	portal protein	Q5C835	Enterobacteria_phage	0.0e+00	99.6
WP_112324614.1\|1574292_1575204_+	scaffolding protein	A0A192Y6T4	Salmonella_phage	4.1e-160	99.7
WP_112324615.1\|1575203_1576496_+\|coat	coat protein	C6ZR10	Salmonella_phage	2.1e-242	99.1
WP_000538675.1\|1576536_1577097_+	hypothetical protein	I6S1J7	Salmonella_phage	7.0e-102	98.4
WP_001166101.1\|1577080_1577581_+	packaged DNA stabilization protein p27	I1TEJ0	Salmonella_phage	5.5e-90	98.8
WP_023138249.1\|1577540_1578959_+	hypothetical protein	I1TEJ1	Salmonella_phage	1.5e-273	98.9
WP_023138250.1\|1578962_1579601_+	hypothetical protein	A0A088CPT1	Enterobacteria_phage	6.5e-88	98.1
WP_023138251.1\|1579600_1580056_+	DUF2824 family protein	I6R0L6	Salmonella_phage	1.5e-86	98.7
WP_023259240.1\|1580058_1580748_+	hypothetical protein	B9UDK9	Salmonella_phage	4.3e-93	93.4
WP_023138707.1\|1580757_1582107_+	phage DNA ejection protein	B9UDL0	Salmonella_phage	1.2e-243	98.7
WP_031609731.1\|1582103_1583924_+	hypothetical protein	A0A2H4FNB8	Salmonella_phage	4.1e-276	93.3
WP_112324616.1\|1584508_1586296_+	hypothetical protein	I6S5Y0	Salmonella_phage	8.9e-58	87.5
WP_024137322.1\|1586327_1587782_-	hypothetical protein	NA	NA	NA	NA
WP_023138703.1\|1587771_1588698_-	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	2.2e-161	92.8
WP_023138702.1\|1588694_1589057_-	GtrA family protein	I1TED9	Salmonella_phage	6.2e-51	82.5
WP_017441447.1\|1589191_1590361_-\|integrase	tyrosine-type recombinase/integrase	I6R0M2	Salmonella_phage	7.7e-228	99.2
1590643:1590659	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1832479 : 1841650

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1832479_1833427_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
WP_000824854.1\|1833410_1834142_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1834122_1834230_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1834289_1835021_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|1835243_1836929_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|1836925_1837645_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1837691_1838159_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_023138368.1\|1838215_1838746_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1838917_1839376_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_023138369.1\|1839616_1841650_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_5

2019873 : 2027140

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023137976.1\|2019873_2020293_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	6.5e-36	60.5
WP_001728934.1\|2020295_2021564_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	3.2e-227	92.4
WP_000208509.1\|2022018_2022231_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131163.1\|2022241_2022430_+	hypothetical protein	NA	NA	NA	NA
WP_023137975.1\|2022688_2023900_-	porin	Q1MVN1	Enterobacteria_phage	4.9e-108	55.7
WP_000107443.1\|2024549_2024861_+	hypothetical protein	NA	NA	NA	NA
WP_023137974.1\|2024940_2025636_+	phosphohydrolase	S4W232	Pandoravirus	1.6e-07	28.0
WP_001157305.1\|2025709_2027140_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_6

4055269 : 4141102

Enterobacteria_phage(50.94%)

lysis,integrase,portal,terminase,tRNA,tail,protease

attL 4063620:4063635|attR 4145337:4145352

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023138574.1\|4055269_4055956_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001541509.1\|4056355_4056496_-	hypothetical protein	NA	NA	NA	NA
WP_001194359.1\|4056591_4057308_+	two-component system response regulator ArcA	NA	NA	NA	NA
WP_000749515.1\|4057574_4057889_+	hypothetical protein	NA	NA	NA	NA
WP_000811635.1\|4058273_4058945_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000482235.1\|4059283_4059829_+	fimbrial protein SthA	NA	NA	NA	NA
WP_000680522.1\|4059899_4060583_+	fimbrial assembly chaperone	NA	NA	NA	NA
WP_033903619.1\|4060628_4063166_+	fimbrial outer membrane usher protein	NA	NA	NA	NA
WP_001584421.1\|4063183_4063741_+	fimbrial protein SthD	NA	NA	NA	NA
4063620:4063635	attL	NA	NA	NA	NA
WP_023138572.1\|4063781_4064867_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_000920383.1\|4064924_4066274_-	cell envelope integrity protein CreD	NA	NA	NA	NA
WP_017441769.1\|4066331_4067756_-	two-component system sensor histidine kinase CreC	Q8QKV7	Ectocarpus_siliculosus_virus	2.7e-09	23.1
WP_001187046.1\|4067755_4068445_-	two-component system response regulator CreB	NA	NA	NA	NA
WP_000875811.1\|4068457_4068931_-	protein CreA	NA	NA	NA	NA
WP_000371685.1\|4069142_4070012_+	MDR efflux pump AcrAB transcriptional activator RobA	NA	NA	NA	NA
WP_023138571.1\|4070008_4070656_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB	NA	NA	NA	NA
WP_000554315.1\|4070704_4071220_+	non-canonical purine NTP phosphatase	NA	NA	NA	NA
WP_000192003.1\|4071321_4071648_-	trp operon repressor	NA	NA	NA	NA
WP_000373272.1\|4071705_4073643_-	murein transglycosylase	A0A1P8CWQ1	Bacillus_phage	1.8e-11	36.4
WP_023138570.1\|4073851_4075519_+	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	1.3e-42	26.7
WP_023138569.1\|4075636_4076869_-	multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	A0A0C5K935	Enterococcus_phage	3.3e-88	45.2
WP_001029710.1\|4077019_4078402_-	DNA repair protein RadA	NA	NA	NA	NA
WP_001132983.1\|4078485_4079454_-	phosphoserine phosphatase	NA	NA	NA	NA
WP_000090067.1\|4079570_4080215_+	YtjB family periplasmic protein	NA	NA	NA	NA
WP_023138568.1\|4080248_4081265_+	lipoate--protein ligase LplA	NA	NA	NA	NA
WP_023138567.1\|4081575_4082265_+	DUF1120 domain-containing protein	NA	NA	NA	NA
WP_000722272.1\|4082312_4083002_+	DUF1120 domain-containing protein	NA	NA	NA	NA
WP_001112028.1\|4083079_4083787_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_023138566.1\|4083800_4086209_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_017441766.1\|4086205_4086778_+	membrane protein	NA	NA	NA	NA
WP_000224864.1\|4086815_4087535_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_000816454.1\|4087744_4088968_-	phosphopentomutase	NA	NA	NA	NA
WP_023138565.1\|4089019_4090342_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	2.3e-79	41.4
WP_001127752.1\|4090465_4091263_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_023138564.1\|4091504_4093055_+	YjjI family glycine radical enzyme	NA	NA	NA	NA
WP_001064939.1\|4093026_4093890_+	YjjW family glycine radical enzyme activase	NA	NA	NA	NA
WP_023138563.1\|4093922_4094696_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000531540.1\|4094692_4095766_-	patatin family protein	NA	NA	NA	NA
WP_000490276.1\|4095888_4096050_-	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	1.8e-10	66.0
WP_000178963.1\|4096178_4096796_-	molecular chaperone OsmY	NA	NA	NA	NA
WP_023138562.1\|4097197_4098784_-	peptide chain release factor 3	D0R0F5	Streptococcus_phage	4.1e-30	25.2
WP_001217546.1\|4099003_4099252_+	DinI family protein	A5LH55	Enterobacteria_phage	5.4e-38	98.8
WP_000348577.1\|4099789_4099987_+	hypothetical protein	NA	NA	NA	NA
WP_023138561.1\|4100129_4100711_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	3.5e-104	95.8
WP_077908628.1\|4100710_4103833_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	4.7e-54	52.8
WP_023138558.1\|4103897_4104497_-	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	4.5e-99	88.4
WP_023138557.1\|4104564_4108053_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	87.7
WP_153274582.1\|4108119_4108458_-	hypothetical protein	NA	NA	NA	NA
WP_028127181.1\|4108530_4109172_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	3.8e-96	85.6
WP_033903618.1\|4109069_4109813_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
WP_001179670.1\|4109817_4110516_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	4.9e-129	95.7
WP_023138555.1\|4110515_4110845_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	5.4e-54	95.4
WP_112324602.1\|4110841_4113916_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	94.9
WP_001161009.1\|4113887_4114217_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_001372042.1\|4114225_4114612_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	4.3e-66	100.0
WP_000211106.1\|4114671_4115415_-\|tail	tail protein	K7PGT7	Enterobacteria_phage	1.6e-133	100.0
WP_001079419.1\|4115425_4115827_-\|tail	tail protein	A5LH34	Enterobacteria_phage	1.9e-72	99.2
WP_000677106.1\|4115823_4116402_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	4.2e-102	100.0
WP_001283153.1\|4116413_4116689_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_001097045.1\|4116681_4117005_-	DUF2190 family protein	K7PLV6	Enterobacteria_phage	8.5e-52	100.0
WP_065311213.1\|4117091_4119119_-\|protease	Clp protease ClpP	A5LH30	Enterobacteria_phage	0.0e+00	99.4
WP_015953980.1\|4119063_4120644_-\|portal	phage portal protein	A5LH29	Enterobacteria_phage	4.3e-290	100.0
WP_001072975.1\|4120571_4120784_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_023138551.1\|4120780_4122883_-\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	96.9
WP_000373425.1\|4122882_4123377_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
WP_001139680.1\|4124052_4124205_-	hypothetical protein	K7PKL2	Enterobacteria_phage	1.2e-21	100.0
WP_001341210.1\|4124192_4124660_-\|lysis	lysis protein	A0A291AWW3	Escherichia_phage	7.7e-78	100.0
WP_001135251.1\|4124656_4125154_-	lysozyme RrrD	A0A291AWW2	Escherichia_phage	1.7e-91	99.4
WP_000839596.1\|4125153_4125369_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_023138550.1\|4125435_4126488_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	8.0e-208	99.7
WP_000917730.1\|4126638_4126842_-	hypothetical protein	A0A291AWX6	Escherichia_phage	1.8e-31	98.5
WP_023138549.1\|4127242_4128106_+	NYN domain-containing protein	A4JWQ6	Burkholderia_virus	2.4e-40	40.8
WP_077908626.1\|4128118_4128484_-	antitermination protein Q	A5LH77	Enterobacteria_phage	6.4e-56	90.0
WP_033903617.1\|4128499_4129489_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-194	99.4
WP_001061380.1\|4129496_4130306_-	KilA-N domain-containing protein	Q8SBE6	Shigella_phage	2.8e-152	98.9
WP_000767103.1\|4130325_4130715_-	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	1.0e-67	98.4
WP_000210170.1\|4130711_4131038_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_000066917.1\|4131034_4131688_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_015364395.1\|4131687_4132182_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	3.3e-87	98.8
WP_000061519.1\|4132178_4132997_-	helix-turn-helix domain-containing protein	A0A291AWW0	Escherichia_phage	4.7e-123	99.6
WP_000620697.1\|4132993_4133218_-	hypothetical protein	A5LH70	Enterobacteria_phage	1.3e-38	98.6
WP_023138547.1\|4133214_4134363_-	antirepressor from phage	K7PLX4	Enterobacteria_phage	2.2e-179	87.5
WP_023138546.1\|4134359_4134911_-	hypothetical protein	K7PGU3	Enterobacteria_phage	1.3e-100	99.5
WP_001191669.1\|4134903_4135164_-	helix-turn-helix transcriptional regulator	K7PJQ8	Enterobacteria_phage	5.4e-41	100.0
WP_001345148.1\|4135261_4135954_+	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	8.3e-121	96.1
WP_072208138.1\|4136470_4137019_+	hypothetical protein	U5P4J6	Shigella_phage	1.2e-98	98.3
WP_000081297.1\|4137084_4137909_+	YfdQ family protein	Q8SBF9	Shigella_phage	4.6e-150	99.6
WP_023138545.1\|4138036_4138573_+	5'-deoxynucleotidase	A5LH62	Enterobacteria_phage	4.1e-99	98.3
WP_071591280.1\|4138807_4139083_+	hypothetical protein	NA	NA	NA	NA
WP_001317460.1\|4139285_4139618_+	protein flxA	NA	NA	NA	NA
WP_001218281.1\|4139878_4141102_-\|integrase	site-specific integrase	A5LH57	Enterobacteria_phage	9.5e-237	99.0
4145337:4145352	attR	NA	NA	NA	NA

DBSCAN-SWA_7

4492495 : 4555489

Burkholderia_phage(29.63%)

transposase,plate,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164528041.1\|4492495_4493724_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.3e-169	95.3
WP_000389245.1\|4494265_4494898_-	hypothetical protein	NA	NA	NA	NA
WP_000168322.1\|4495937_4496468_-	single-stranded DNA-binding protein SSB1	A0A0A0P1Q9	Enterobacteria_phage	3.9e-54	88.9
WP_000357725.1\|4496715_4499541_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	55.7
WP_001609612.1\|4499672_4500128_+	hypothetical protein	NA	NA	NA	NA
WP_023138079.1\|4500114_4500453_+	hypothetical protein	NA	NA	NA	NA
WP_000155665.1\|4500453_4500810_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_000270392.1\|4500812_4501229_-	YjbQ family protein	NA	NA	NA	NA
WP_000724435.1\|4501357_4502071_-	acid phosphatase AphA	NA	NA	NA	NA
WP_112324618.1\|4502257_4503451_-	aromatic amino acid transaminase	NA	NA	NA	NA
WP_001147297.1\|4503636_4504716_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	1.2e-28	29.1
WP_000918353.1\|4504747_4506163_-	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	7.0e-199	78.4
WP_000235550.1\|4506227_4507211_+	quinone oxidoreductase	NA	NA	NA	NA
WP_000891417.1\|4507385_4507628_-	envelope stress response protein PspG	NA	NA	NA	NA
WP_023138081.1\|4507795_4508794_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039335.1\|4508881_4510192_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416271.1\|4510438_4510954_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4511053_4511263_-	CsbD family protein	NA	NA	NA	NA
WP_001575282.1\|4511284_4511398_-	hypothetical protein	NA	NA	NA	NA
WP_001128113.1\|4511394_4512720_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4512898_4513507_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002902.1\|4513615_4513984_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4514154_4516575_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_023138082.1\|4516673_4517546_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019230.1\|4517559_4518057_-	chorismate lyase	NA	NA	NA	NA
WP_000782497.1\|4518237_4519155_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973644.1\|4519318_4520677_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4520765_4521875_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000695415.1\|4522236_4523427_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_023138083.1\|4523558_4525103_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252081.1\|4525117_4526008_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982752.1\|4526173_4526584_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750805.1\|4526726_4528823_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_023138084.1\|4528822_4529560_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_161126850.1\|4529556_4530225_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4530258_4530501_-	outer membrane protein	NA	NA	NA	NA
WP_000790033.1\|4530944_4532594_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136394.1\|4532938_4534288_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4534418_4534766_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226439.1\|4535342_4535630_+	membrane protein	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
WP_001270445.1\|4535632_4536238_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	5.9e-62	61.0
WP_023138085.1\|4536250_4536565_+	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_000875313.1\|4537175_4537373_+	hypothetical protein	Q6QIB1	Burkholderia_phage	5.1e-07	52.9
WP_023138087.1\|4537362_4538790_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.4e-194	71.2
WP_023138088.1\|4538789_4539314_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	6.2e-68	69.0
WP_001003638.1\|4539365_4539683_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001728452.1\|4539642_4539771_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_023138089.1\|4539867_4542234_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	2.4e-66	31.1
WP_023138090.1\|4542233_4543187_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_001269716.1\|4543186_4543396_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_023138091.1\|4543383_4544427_+	phage late control D family protein	A4JWL3	Burkholderia_virus	1.9e-76	45.6
WP_023138092.1\|4544436_4545159_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_000593184.1\|4545485_4545848_+	GtrA family protein	U5P0S6	Shigella_phage	9.6e-44	70.8
WP_023138093.1\|4545844_4546774_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	6.1e-151	84.4
WP_023138094.1\|4546773_4548321_+	hypothetical protein	B9UDL6	Salmonella_phage	2.5e-48	29.9
WP_023138095.1\|4548484_4548844_+\|plate	baseplate	Q6QIA0	Burkholderia_phage	4.0e-34	62.4
WP_023138096.1\|4548834_4549950_+\|plate	phage baseplate protein	Q6QI99	Burkholderia_phage	5.3e-101	52.0
WP_000359503.1\|4549942_4550575_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
WP_023138097.1\|4550577_4552323_+\|tail	phage tail fiber protein H	A0A0M3ULH6	Salmonella_phage	1.9e-52	40.5
WP_031607397.1\|4552327_4552933_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_017465885.1\|4552929_4553385_+	hypothetical protein	NA	NA	NA	NA
WP_024132246.1\|4553765_4554182_+	serine acetyltransferase	NA	NA	NA	NA
WP_000587738.1\|4554760_4555489_+	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043509

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection