CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP047364	Macrococcus canis strain Epi0076A plasmid pEpi0076A-1, complete sequence	0 crisprs	NA	0	0	0
NZ_CP047365	Macrococcus canis strain Epi0076A plasmid pEpi0076A-2, complete sequence	0 crisprs	NA	0	0	0
NZ_CP047363	Macrococcus canis strain Epi0076A chromosome, complete genome	3 crisprs	csa3,RT,WYL,cas3,DEDDh,Cas9_archaeal,DinG	4	4	7

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047363_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047363_1

409521-409982

Orphan

Consensus_repeat	Method
ATATACCANGCTCCGTACGTGC	CRT

11 spacers

The CRISPR arrays of NZ_CP047363_1

>merge|NZ_CP047363|1|409521-409982|CRT
ATATACCGTGCTCCGTACGTGCGTTTTAGTGCTGTTTTGCATATACCAGGCTCCGTACGTGCGTTTTAGTGCTGTTTTGCATATACCAGGCTCCGTACGTGCACCAGCACCTCATTCTGCATATACCAAGCTCCGTACGTGCGTTTTAGTGCTGTTTTGCATATACCAGGATCCGTACGTGCGCTATACCACCATTCTGCATATACCAAGCTCCGTACGTGCACCAGCACCTCATTCTGCATATACCAAGCTCCGTACGTGCACCAGTACCTCATTCTGCATATACCAAGCTCCGTACGTGCGTTTTAGTGCTGTTTTGCATATACCAGGATCCGTACGTGCGCTATACCACCATTCTGCATATACCAAGCTCCGTACGTGCACCAGCACCTCATTTTGCATATACCAAGCTCCATACGTGCACCAGCACCTCATTCTGCATATACCAAGCTCCATACGTGC

>NZ_CP047363|1|1|409521-409982|CRT
ATATACCGTGCTCCGTACGTGC	GTTTTAGTGCTGTTTTGC
ATATACCAGGCTCCGTACGTGC	GTTTTAGTGCTGTTTTGC
ATATACCAGGCTCCGTACGTGC	ACCAGCACCTCATTCTGC
ATATACCAAGCTCCGTACGTGC	GTTTTAGTGCTGTTTTGC
ATATACCAGGATCCGTACGTGC	GCTATACCACCATTCTGC
ATATACCAAGCTCCGTACGTGC	ACCAGCACCTCATTCTGC
ATATACCAAGCTCCGTACGTGC	ACCAGTACCTCATTCTGC
ATATACCAAGCTCCGTACGTGC	GTTTTAGTGCTGTTTTGC
ATATACCAGGATCCGTACGTGC	GCTATACCACCATTCTGC
ATATACCAAGCTCCGTACGTGC	ACCAGCACCTCATTTTGC
ATATACCAAGCTCCATACGTGC	ACCAGCACCTCATTCTGC
ATATACCAAGCTCCATACGTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047363.1\|WP_164953001.1\|411751_412435_+\|response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_CP047363.1\|WP_164953004.1\|414176_416147_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|376899
NZ_CP047363.1\|WP_164952997.1\|406415_408584_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|131058
NZ_CP047363.1\|WP_164952990.1\|401676_401883_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047363.1\|WP_164941594.1\|416203_416743_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047363.1\|WP_164952999.1\|410126_410657_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|180707
NZ_CP047363.1\|WP_164952992.1\|403174_403573_-\|DUF3147-family-protein	unknown	unknown	gnl\|CDD\|288237
NZ_CP047363.1\|WP_164953002.1\|412431_413313_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|340424
NZ_CP047363.1\|WP_164953003.1\|413425_414175_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP047363.1\|WP_164953005.1\|417018_419634_+\|pyruvate,-phosphate-dikinase	unknown	unknown	gnl\|CDD\|236446
NZ_CP047363.1\|WP_164941597.1\|420498_421218_-\|C26-family-cysteine-hydrolase-domain-containing-family	unknown	unknown	gnl\|CDD\|336781
NZ_CP047363.1\|WP_164952989.1\|401068_401626_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP047363.1\|WP_164952998.1\|408652_409474_+\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197313
NZ_CP047363.1\|WP_164952994.1\|404087_404762_+\|type-1-glutamine-amidotransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|153235
NZ_CP047363.1\|WP_164952993.1\|403588_403948_-\|DUF3147-family-protein	unknown	unknown	gnl\|CDD\|288237
NZ_CP047363.1\|WP_164953000.1\|410653_411679_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376129
NZ_CP047363.1\|WP_164952996.1\|405240_406248_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224525
NZ_CP047363.1\|WP_164952991.1\|402005_403148_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP047363.1\|WP_164952995.1\|404832_405192_+\|DUF454-family-protein	unknown	unknown	gnl\|CDD\|377291
NZ_CP047363.1\|WP_138070406.1\|419652_420474_+\|kinase/pyrophosphorylase	unknown	unknown	gnl\|CDD\|377080

Protein	Function_ID	Function_description	E-value
NZ_CP047363.1\|WP_164953001.1\|411751_412435_+\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.94216e-66
NZ_CP047363.1\|WP_164953004.1\|414176_416147_+\|FtsX-like-permease-family-protein	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	0.00132403
NZ_CP047363.1\|WP_164952997.1\|406415_408584_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|131058	TIGR02003, PTS_system_glucose-specific_IIBC_component, PTS system, IIBC component. This model represents a family of fused B and C components of PTS enzyme II. This clade is a member of a larger family which contains enzyme II's specific for a variety of sugars including glucose (TIGR02002) and N-acetylglucosamine (TIGR01998). None of the members of this clade have been experimentally characterized. This clade includes sequences from Streptococcus and Enterococcus which also include a C-terminal A domain as well as Bacillus and Clostridium which do not. In nearly all cases, these species also contain an authentic glucose-specific PTS transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP047363.1\|WP_138070406.1\|419652_420474_+\|kinase/pyrophosphorylase	gnl\|CDD\|377080	pfam03618, Kinase-PPPase, Kinase/pyrophosphorylase. This family of regulatory proteins has ADP-dependent kinase and inorganic phosphate-dependent pyrophosphorylase activity.	9.8374e-122
NZ_CP047363.1\|WP_164952999.1\|410126_410657_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|180707	PRK06811, PRK06811, RNA polymerase factor sigma-70; Validated.	1.0692e-32
NZ_CP047363.1\|WP_164952992.1\|403174_403573_-\|DUF3147-family-protein	gnl\|CDD\|288237	pfam11345, DUF3147, Protein of unknown function (DUF3147). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	1.02896e-24
NZ_CP047363.1\|WP_164953002.1\|412431_413313_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|340424	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.	1.65855e-39
NZ_CP047363.1\|WP_164953003.1\|413425_414175_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	3.68191e-105
NZ_CP047363.1\|WP_164953005.1\|417018_419634_+\|pyruvate,-phosphate-dikinase	gnl\|CDD\|236446	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.	0
NZ_CP047363.1\|WP_164941597.1\|420498_421218_-\|C26-family-cysteine-hydrolase-domain-containing-family	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	1.12335e-79
NZ_CP047363.1\|WP_164952989.1\|401068_401626_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	5.98042e-29
NZ_CP047363.1\|WP_164952998.1\|408652_409474_+\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197313	cd09079, RgfB-like, Streptococcus agalactiae RgfB, part of a putative two component signal transduction system, and related proteins. This family includes Streptococcus agalactiae RgfB (for regulator of fibrinogen binding) and related proteins. The function of RgfB is unknown. It is part of a putative two component signal transduction system designated rgfBDAC (the rgf locus was identified in a screen for mutants of Streptococcus agalactiae with altered binding to fibrinogen). RgfA,-C,and -D do not belong to this superfamily: rgfA encodes a putative response regulator, and rgfC, a putative histidine kinase. All four genes are co-transcribed, and may be involved in regulating expression of bacterial cell surface components. This family belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.	7.10799e-115
NZ_CP047363.1\|WP_164952994.1\|404087_404762_+\|type-1-glutamine-amidotransferase-domain-containing-protein	gnl\|CDD\|153235	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein. Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein (EcHsp31). This group includes EcHsp31 and Saccharomyces cerevisiae Ydr533c protein. EcHsp31 has chaperone activity. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1 domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For EcHsp31, this Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. For Ydr533c a catalytic triad forms from the conserved Cys together with a different His and Glu from that of the typical GATase1domain. Ydr533c protein and EcHsp31 are homodimers.	2.99223e-83
NZ_CP047363.1\|WP_164952993.1\|403588_403948_-\|DUF3147-family-protein	gnl\|CDD\|288237	pfam11345, DUF3147, Protein of unknown function (DUF3147). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	2.25796e-28
NZ_CP047363.1\|WP_164953000.1\|410653_411679_+\|hypothetical-protein	gnl\|CDD\|376129	pfam18705, DUF5643, Family of unknown function (DUF5643). This is an immunoglobulin-like domain found in bacteria.	0.0049662
NZ_CP047363.1\|WP_164952996.1\|405240_406248_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	9.82125e-89
NZ_CP047363.1\|WP_164952991.1\|402005_403148_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	5.69172e-64
NZ_CP047363.1\|WP_164952995.1\|404832_405192_+\|DUF454-family-protein	gnl\|CDD\|377291	pfam04304, DUF454, Protein of unknown function (DUF454). Predicted membrane protein.	1.97792e-39

>NZ_CP047363.1|WP_164952998.1|408652_409474_+|endonuclease/exonuclease/phosphatase-family-protein
MKVLTLNTHSWLEDNQEEKLDVIVARILKADYDIIALQEVNQLSHNAVIETPENFCPLLEQTPIKQGNFAYEIVKKLKEKGVTYYWSYAMSHIGYDIYDEGSALLSKTPIDPYAVFVSIEESPDNYKSRKILFGKTTADDIELLAASCHYSWWITQSEGFSYEWNNTINTLLHYDMPKLVMGDFNNPEGTEGYAFVINSEANIQDTYTVATKRTGSHTIEKNIAGWEDNDGKLRIDFIFSTPEFKVLHHGTVFDGETEAVVSDHFGVEAEIEL
>NZ_CP047363.1|WP_164952997.1|406415_408584_+|PTS-transporter-subunit-EIIC
MKNLLSFEFWQKFGKALMVVVAVMPAAGLMISIGKSIPLISPDMQMLITIGGVIESIGWAIIGNLHLLFALAIGGSWAKERAGGAFAAGIAFVLINRITGAIFGVNSAMLADDKAFTHTLFGTKIMIKGFFTSVLEAPALNMGVFVGIIAGFVGANAYNKYYNYRKLPDALSFFNGKRFVPFVVILWSTIVAIILSIVWPYIQAGINNFGLWIATSKDTAPILAPFLFGFLERLLLPFGLHHMLTIPINYTQLGGTYEILSGAQAGTKVYGQDPLWLAWATDLVNLNHAGDTAQYNHVLNSFTPARFKVGQMIGSSGILMGLAYAMYRNVDKDKKPKYKSMYFSAAIAVFLTGVTEPLEFMFMFVAAPLYAVYALIQGAAFAMADVINLRVHSFGTIELLTRTPLALKAGLGGDLINFVLTTIGFAIGTYFIANFLIKKFNFATPGRNGNYEIDGEANATEVVAADKQVIQVIHLLGGKDNIKDVDACMTRLRVSVNDKSKVGTEADWKKAGAMGLIVKDNGVQAVYGPKADVLKSDIEDLLQSGADIPEPEETTVQPTILDNADSAGFTGHVHQLRSVADGEVIDITDVNDPVFSQKMMGEGYAVKPESEEVVSPVDGEIISIFPTKHAIGIRTNDGIEVLVHMGIETVQMKQPASRVVVNDGQKVKAGDTLAYMDLTAVRAEGKDTTIIIVMTNSDKVDTLQLNKTGIVQKGETVGTMTV
>NZ_CP047363.1|WP_164952996.1|405240_406248_-|substrate-binding-domain-containing-protein
MTITVKDVARAAGVATSTVSRVINDHPSISQATKRKVQKVMDELGYVPNISARNLGKRTTSAVGIILPPLNSKERLANPFFLEIIEAINGEARTHNLTTALAIAKDIDTLFENVKAMHTEKQVGGFIITYSVIDDPIMMYLRQHNIPFVLIGQPYNNPSETVYVDNDNQLLGQEATDYLITQGHKEILFITNTTVENIFYERYFGYQKAMMLESLNLHQSLTLNEHNDYIILEDTIKRTKATAIIALDDIFALRIIQLVELYGYKVPDDISVISFNNSVFSTLTHPYLTTLDIETSKLGQKAMNKLASLIRGEHIDGTRFVIPHRLIERETVIKK
>NZ_CP047363.1|WP_164952995.1|404832_405192_+|DUF454-family-protein
MKYFLIIVGAVSTVLGFIGVVLPLLPTTPFLLLAVFCFARSSERFHQWLIETQIYKSYVQEFYEQQGYTMKKKLQLLISVYIVVGFSIYMIDHLYVRIGLVIMLILQTVVLFFFIKTIK
>NZ_CP047363.1|WP_164952994.1|404087_404762_+|type-1-glutamine-amidotransferase-domain-containing-protein
MRKLMIINTNTEYYPGTNHKTGLWIGELVHFYDVFNGSDIEVDIYSVDGSDIPIDPLSTSPLMLDALTKSYMEDAHFMAKLKQAPSFTSANINDYDGVYFTGGHGVMFDFPDNMELKQLIARMDKEGKVIASVCHGTAALLNVEDEWLKDRSVAGFSNMEEKLAGKTNLVPFLLETELKKSGAKYEKALLPYTSKVVVDKNVITGQNPQSPKGVGKAVLKYLQQ
>NZ_CP047363.1|WP_164952993.1|403588_403948_-|DUF3147-family-protein
MFGISMSGLLLRFVIGGIAVAGASIISNKVGGKIGGIFATLPAVFLAAILALAVDHNGEDLINASINLSSGAVIGITSCILTVALASYFVRKTGFKKGAVLSTLCWFVISCIFFAIKNF
>NZ_CP047363.1|WP_164952992.1|403174_403573_-|DUF3147-family-protein
MKAKLLLLKFLIGGSTVALSYIISNVIPWEDFGGIFATFPAVFLLSLVIAGIEYGDDFATNVCRGAVFGMSGGLISIIVTWLMLSSTSNYALSIIIGFIAWFISALIISKLVTIIHSVISRQSFTHFSIHIK
>NZ_CP047363.1|WP_164952991.1|402005_403148_+|MFS-transporter
MKVNLFLLAMMAFLAGLNELVLAGILPFVMDYFNINTQEAGYLVTVFALIFGLAGPVLMSLTMNVNRKSLLLIFLSIFIAGNLMSVFAYSYWMMMLSRIVLAASVSMLIGLALSLSVKVVPEYMQARAIGVIMMSISGSLVLGTPIGIYIAELTDWKMIFVLISVLSVVLMLLLMKYFPKNIQVEHVSMARDWKFILRKEILSVHLFSFLFFVGQGMFFIYMTPYLMDRGHSIGVVGLIYLVFGLAGIAGSGIGGYMTDKFGSTNLLVVQSFLYVFLMLLINFTASSAILVGINIAIWAMTGWMVNAPTQSYLIQAAPKFSSINQTVSTSSTQFGISLGALLGGICITQTNSYPSLIYYGCIVLAIAFIVTLYVRHLNMK
>NZ_CP047363.1|WP_164952990.1|401676_401883_+|hypothetical-protein
MPMMNVYVTLEEKKMIQAVAEALDMKVSDVFKTFSMKEIEEKASALDVEQVSLKQDKSHKAMMRELGL
>NZ_CP047363.1|WP_164952989.1|401068_401626_+|GNAT-family-N-acetyltransferase
MQHFSIKVDKDIELVQPEVTYAKALFNVLDQNRAYLREYLSFIDYVTEVEHETQFIKMMLSRQAEGMGRLFLIFINGSLQGTIDLHAISNEHKKAEIGYWISESYSGKGITTKAVRAICDFGFNTLGLNKISLIADTENKGSNKVALKSGFTFVCTDIEDIMHYGTLRDMNRYALLKKDFNNATR
>NZ_CP047363.1|WP_164952999.1|410126_410657_+|sigma-70-family-RNA-polymerase-sigma-factor
MNDFDASIIRKIKHRNEQGIELLLKRYGGLIKSIAKHNLYLYETHIEECINDVLIAIWNNIDSYNPEKSSFKNWIGVITKYHAIDTLRKHSRYTYNQLDSAKNEGIKDKYEIYIDELWQELIEPLSSDDKEIMTRIFIEGYSPDEVAHSMNKNTSNIYNRISRAKEKIRKLKGDSL
>NZ_CP047363.1|WP_164953000.1|410653_411679_+|hypothetical-protein
MRHLYDKMNELKMDDVAMETMKSKEVNHYFETFQQKNNTVKKKKKKAPVLAVAVAAAAILTPTLNHDIQANIVRALDDVSYSFKDIITPEAEKYATHINETINLGDTDVKLTDVYVSDKSLVYNLLIDGKGKDLHADLSSVKINGKEAYEGSSGGSGVINKDDIISDNMVVHLRESVPKEKMEVELTFSGVRSMSRKDETETKSFGYKFEVNPNELNKAMFVKDIHHSLNLNGGKININKIKISPIHSNITLDSNLNHRYNINLYDEHGKIYAFDALKTEKDNSKYVSSLFFNQDVGSTGTIDDMNKAQILKLEIIDTGIDKNGAVKEEGKSNKEEIIIKK
>NZ_CP047363.1|WP_164953001.1|411751_412435_+|response-regulator
MKIMIVEDDPVIREHLAEALKKWQYEVCIAKNFNDIIDEFNNYKPHIVLLDINLPAYNGYYWCQEIRKISQVPIIFISSRNDSMDQVMAMQMGADDYIEKPFNMTVTVSKVQAMLRRSYDFSILDNLNNGMEINGVELIPEQAKLMFHEEHIDLTLTELQIMQCLFKANGSFISRNALIESCWESEHFIDDNTLAVNMTRLRKKLQKLGLHDFIETKKNVGYRIGDI
>NZ_CP047363.1|WP_164953002.1|412431_413313_+|HAMP-domain-containing-histidine-kinase
MSFLKTIQREIYIIVLICALFFFILLMYNVPFQAYLIGLGIVLFISIIYWIIRFINYRQEQTLQELNEDLKIENHRLRNDFINYQSEVESYFLMWVHQIKTPITASKLLLEDPDEKVISKVRNEVLQIDNYTNLALNYLKLMNQKTDMVFMEVSIDELVRPLIKRYAIQFIHHQTKLHYDKSNAIVLTDAKWASIMIEQLLNNALKYARGKDVWITFNDDSKTLSIRDNGIGINASDLPKIFDKGFSGYNGRLSEKSSGIGLYIVNTISKRLGHKVNVNSTINEGSTFTIQFK
>NZ_CP047363.1|WP_164953003.1|413425_414175_+|ATP-binding-cassette-domain-containing-protein
MLLDIKNVKKVFGRGANQTVALKDMNFSINEGEFVAIMGESGSGKSTLLNIIATFDTPTEGSVTIGGQDLSMLKNKGIAKFRRDTLGFVFQDFNVLHTMSNKDNILMPLVLSNMKPNVIEERLSRLAPKLGISEHLEKFPNQISGGQQQRVAIARALISNPSLLLADEPTGALDSKTSTDIMNLFQNINKDNQTILMVTHSTIDAAYASRVVFIKDGILYHEIYRGDESQNEFQKRISDSLSMLSERGE
>NZ_CP047363.1|WP_164953004.1|414176_416147_+|FtsX-like-permease-family-protein
MLQLLSKLVIKNFKSLRQIFIPFILATSVMLGLQYIMLSMIANEYIQKRHANLPQLLVYSNVLVGILTIVFIIYANRFVMKQRKQEFALNMVLGLEKKHIRFILLLESFIQFIVISLLSVCGGYLFGNLVFLLMNKLVKSKGMSLMDYPFDVKSALLTIAILAGVMVILFIFNNISLTLQSPIQLMRSQLAGEKKTSKWLLAVLFIIGAIALGYGYYIALTVTGVLDSLQNIFTAVLLVMIGTYFLFMSLTIIVLQLLKRNKNIYYKPNQFFSISGLLSRMKANAVGLASITMLMTFLMVTLGMSLSAYRGIEAQVAGSMTHKYEINLYGPKKKQVKNIQEDISKIADVDKFRVSTSAFFPIIKEGDELIPLNDKIGPKLQGKDMTYIVLTTEKDHNIARDAAVKVNDGEIIVSTNAERYSHDKTLKIMNQEVKVQRETENYLGNEIAIDAMYIIVKDKTQFEKYRNYFKSLNNETNKLEAPEAGDTLAFNVKAHEDAFKKAIPKFQKKYGIRIDDKDDVQKTIYELNGGLIFIGIVVSITLLTGVFLVLYYKQLSEGHEDKRNYDIMQKVGLPQDLIKKTINKQIIWIFGLPIIITVIHTLFATKIIFNLLGVLGIRDKAMFFSSYGIVMLVIMVVYGIMYLITSRTYYKIVNEK
>NZ_CP047363.1|WP_164941594.1|416203_416743_-|hypothetical-protein
MYQLEFIDGKKHHIVGMFDTVEEIKEWLAVVPFITAYESEKEYTMEYKNIPDYAEIEWRGSIYPLTRHSFSGNHTIVIDWSYVATIKDHEGIVPGYTLIEGYMYENSDVEEYIVVRNKMKDELKEYYTLHGKTVFVDGLGTEQGEYITTEGGPIIHIDPMNVDAWEKAESIDAFVKTFE
>NZ_CP047363.1|WP_164953005.1|417018_419634_+|pyruvate,-phosphate-dikinase
MSKKIYAFEEGKQNMKDLLGGKGANLSEMMRLGLPVPNGFTITTEACIEYLEKGEQLSDDLLTELKTYIKALEEKTGKAFSSNENLLLVSVRSGAKISMPGMMDTILNLGLNDENVEKLAAKTEDARFAYDCYRRLLQMFGSVVYNIPMTAFEEYFESFKKEKGHVTDADVPAEDLKVIVDKYKEIYVEEAYKPFPQEPFKQLTEAIEAVFKSWNNDRARIYRDLNEIPHHIGTAVNVQEMVFGNSGDRSGTGVAFTRNPATGEHKLYGEYLLNAQGEDVVAGIRTPKEIETLNEQMPEVYQAFVDVTKKLESHYKDMQDIEFTIENEKLFILQTRNGKRTAKAAINIAVDMVHEGVISKEDAVGMVDVKSIDQLLHPAFKEEALESAELVSDKGLPASPGAATGVVVFSALDAKAKAEAGEKVILVRPETSPEDIEGMIAAEAIVTTHGGMTSHAAVVARGMGKCCVTGCSDLEINTKEKYVKYAGKTLSEGDVISVNGSTGAVYIGEIETTKAEASDVFEEFMGWAEEIARLSVRMNAETEGDIKAGYSFNAKGIGLVRTEHMFFGEERLVEMRRFILASTYEERVEALNKIKVYQTEDFEGIFNLSQDRPSIVRLLDPPLHEFLPKGGEEVKAVADQLGVTTDFLEKRISELHEFNPMLGHRGCRLAITYPELYEMQTEAIITAVLNLKEKGIETKPEIMIPLVSTTQEFVILKDVVKKKAQEVMDAKGVQVDYLIGTMIETPRACLVAGELAQHSEFFSFGTNDLAQLTYGFSRDDAGKFINEYINRDILTVDPFQTLDIDGIGQLIKMAVDNAKKVNPQIKIGVCGELGGDPKSIHYFNTLDIDYVSCSPFRVPGAILATAQSQVE
>NZ_CP047363.1|WP_138070406.1|419652_420474_+|kinase/pyrophosphorylase
MSKYEEDDLLIYIVSDSIGETADRMLHATLSQFPKLTSVTVKKFSFVKDEEEFRNILKLAHDKNAIVVTTLVNPDFNEIGKAYAEATGLSYIDYMTGLIKVIENHTDMEARHESGALRKLDSDYFKRIEAIEYSVKYDDGKNFHNLSEADALIVGVSRTSKTPLSMYLANKGYKIANIPLVPESPIPETVFQEKNLRVIGLTASPEYIMNIRTERVKILGLTGQAEYNNLRRIKEELSYAEEVFNRLNATVINTEFKSIEESAFYIEKYLNKK
>NZ_CP047363.1|WP_164941597.1|420498_421218_-|C26-family-cysteine-hydrolase-domain-containing-family
MTLPVIGITTMIEPDGDLHLRPSYINAIADLGGTPILLAKNENDHAIKEQISRIDGLYLTGGTDINPSTYGEEPHPKLGVVEIGRDEYEIKLIKHALERGVPIIGICRGSQLLNSINGGTMYQNLEDQYSGELLQHMQHSARDYLQHTIHVEPDTKFHKIVGVDKFQVNSFHHQANHKLADEFVLAASAPDGVVEAIEFKTDQFVLGLQFHPEDTYKISEPHRKILEAFIQAAKDYSIK

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Crispr_ID: NZ_CP047363_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047363_2

616752-616838

Orphan

Consensus_repeat	Method
TAAGTGAATCAAGATGGCTCATAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047363_2

>merge|NZ_CP047363|2|616752-616838|CRISPRCasFinder
TAAGTGAATCAAGATGGCTCATAAAAAATAAACATGAGCCAAGAAGAGGATTGAGATGAGTCTAAGTGAATCAAGATGGCTCGTAAA

>NZ_CP047363|2|1|616752-616838|CRISPRCasFinder
TAAGTGAATCAAGATGGCTCATAAA	AAATAAACATGAGCCAAGAAGAGGATTGAGATGAGTC
TAAGTGAATCAAGATGGCTCGTAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047363.1\|WP_138071413.1\|614652_615939_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP047363.1\|WP_164953132.1\|618845_619487_+\|peptidoglycan-endopeptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP047363.1\|WP_164953130.1\|611919_612861_+\|bile-acid:sodium-symporter-family-protein	unknown	unknown	gnl\|CDD\|223462
NZ_CP047363.1\|WP_164953127.1\|608875_609310_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274547
NZ_CP047363.1\|WP_164941734.1\|624322_625423_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226458
NZ_CP047363.1\|WP_164953125.1\|606872_608186_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293810
NZ_CP047363.1\|WP_164953134.1\|620924_622061_+\|DUF418-domain-containing-protein	unknown	unknown	gnl\|CDD\|225193
NZ_CP047363.1\|WP_164941731.1\|620056_620575_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|223427
NZ_CP047363.1\|WP_164953135.1\|622794_624231_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP047363.1\|WP_164953131.1\|613018_613933_+\|NERD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377990
NZ_CP047363.1\|WP_164953136.1\|625499_626516_+\|alpha/beta-hydrolase-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|223730
NZ_CP047363.1\|WP_164953133.1\|619601_620060_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225064
NZ_CP047363.1\|WP_164953129.1\|610262_611753_+\|malate-dehydrogenase-(quinone)	unknown	unknown	gnl\|CDD\|377591
NZ_CP047363.1\|WP_164953126.1\|608243_608879_-\|pyroglutamyl-peptidase-I	unknown	unknown	gnl\|CDD\|237299
NZ_CP047363.1\|WP_138071415.1\|615931_616690_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NZ_CP047363.1\|WP_164953128.1\|609461_609614_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047363.1\|WP_164954039.1\|609609_610011_+\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|349398
NZ_CP047363.1\|WP_164954040.1\|622137_622635_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047363.1\|WP_138070559.1\|620595_620928_+\|alkylphosphonate-utilization-protein	unknown	unknown	gnl\|CDD\|225380
NZ_CP047363.1\|WP_138070555.1\|616946_618425_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143435

Protein	Function_ID	Function_description	E-value
NZ_CP047363.1\|WP_164953132.1\|618845_619487_+\|peptidoglycan-endopeptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	3.83812e-24
NZ_CP047363.1\|WP_164953130.1\|611919_612861_+\|bile-acid:sodium-symporter-family-protein	gnl\|CDD\|223462	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only].	8.0292e-34
NZ_CP047363.1\|WP_164953127.1\|608875_609310_-\|hypothetical-protein	gnl\|CDD\|274547	TIGR03367, queuosine_QueD, queuosine biosynthesis protein QueD. Members of this protein family, closely related to eukaryotic 6-pyruvoyl tetrahydrobiopterin synthase enzymes, are the QueD protein of queuosine biosynthesis. Queuosine is a hypermodified base in the wobble position of tRNAs for Tyr, His, Asp, and Asn in many species. This modification, although widespread, appears not to be important for viability. The queuosine precursor made by this enzyme may be converted instead to archeaosine as in some Archaea. [Protein synthesis, tRNA and rRNA base modification].	5.03279e-08
NZ_CP047363.1\|WP_164941734.1\|624322_625423_+\|hypothetical-protein	gnl\|CDD\|226458	COG3949, COG3949, Uncharacterized membrane protein [Function unknown].	1.22707e-81
NZ_CP047363.1\|WP_138071413.1\|614652_615939_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.12266e-20
NZ_CP047363.1\|WP_164953134.1\|620924_622061_+\|DUF418-domain-containing-protein	gnl\|CDD\|225193	COG2311, COG2311, Predicted membrane protein [Function unknown].	1.13026e-53
NZ_CP047363.1\|WP_164953125.1\|606872_608186_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.96473e-73
NZ_CP047363.1\|WP_164941731.1\|620056_620575_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.80334e-44
NZ_CP047363.1\|WP_164953135.1\|622794_624231_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.64862e-78
NZ_CP047363.1\|WP_164953131.1\|613018_613933_+\|NERD-domain-containing-protein	gnl\|CDD\|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	1.00722e-09
NZ_CP047363.1\|WP_164953136.1\|625499_626516_+\|alpha/beta-hydrolase-fold-domain-containing-protein	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	1.74963e-31
NZ_CP047363.1\|WP_164953133.1\|619601_620060_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	6.28566e-48
NZ_CP047363.1\|WP_164953129.1\|610262_611753_+\|malate-dehydrogenase-(quinone)	gnl\|CDD\|377591	pfam06039, Mqo, Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.	0
NZ_CP047363.1\|WP_164953126.1\|608243_608879_-\|pyroglutamyl-peptidase-I	gnl\|CDD\|237299	PRK13197, PRK13197, pyrrolidone-carboxylate peptidase; Provisional.	1.50172e-103
NZ_CP047363.1\|WP_138071415.1\|615931_616690_+\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	4.17502e-71
NZ_CP047363.1\|WP_164954039.1\|609609_610011_+\|CAP-domain-containing-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	2.30374e-11
NZ_CP047363.1\|WP_138070559.1\|620595_620928_+\|alkylphosphonate-utilization-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	4.75033e-60
NZ_CP047363.1\|WP_138070555.1\|616946_618425_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143435	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.	0

>NZ_CP047363.1|WP_138071415.1|615931_616690_+|ATP-binding-protein
MNDLTIYKQLTSNLEYLKLKQVLLNLDETLDFSIKNNLSLVETLVKLTNYEIDVREQNMIISMVKVAAFPHRKEIHEFDFDFQPSINKQEILNYISLGFLERNENIVFLGTSGVGKTHLATSIGIAAAKKRVSTYFIKCHDLIQNLKKAKIENRLESRLKHYRKYKLLIIDEIGYLPIEKDDAKLFFQLIDMRYETKSTIFTTNINFNLWNEVFEDPKIANAILDRILHHSNVVKITGKSYRLKDHFPKENN
>NZ_CP047363.1|WP_138071413.1|614652_615939_+|IS21-family-transposase
MKLSIHVESEFILKSLSDLSRYKEIMDNLNMKINISEVARQLKKDRRTVKKYLDGFEPSVTRKRRSKVHDYYDIIKELLSDECRQKFYYKRILWQYLKDNEGLECADSTFRAYISSIPEFNDYFKYNKPVKTVRGTTRFETKYGKQAQFDWKENINFITSDGKQVKLNVAVFVLSRSRFKVMQVSLSKSQSVLLDFLTRTFEALNGVPGEIVFDNMKTVMDIPRTEKFRGIVNNKFQQFANDYKFKVKPCIAGQPRTKGKVETQMKLLDEIHAYQGKIKLEEVPQLISRINNRANSTVHNGTGRIPLIELETEKKLLQPLPHEQIRASYKIKRTRLKVNKSNMITYKSNQYSVPAEYNNKFVEIQVYDNKIYVYYNIKLIATHQITTRKLNYREQDYIETLHVSYGDMDDITSMATENLNIIGEMYNE
>NZ_CP047363.1|WP_164953131.1|613018_613933_+|NERD-domain-containing-protein
MIKKVHIPSTVQAYLYELEDRIHMELNDYYKFIKYKKGFEGELKFFEMIEHLEGEYIIIWDINIVKPVRVQYDFVILTANNILHFDIKNYSGNYRYQNNRIISDQGKTDKDIFIQLDNADSYLKQLIAKYEMPQKLISKIIFINEDFNLTGFSRKDCVMFSHELEPVFNYLKTCKGITQQMINFADALIQMHDNEGADNRIHYYKLEDLKLGLRCPKCRKIEMRRVPRKTYFNCSCGYKLKNEDAVRQAYETLDLLGKDKVKRKNIVDFTGLSNRTVTRLMNQHFQKHSHYRGTYYKQTEDLTI
>NZ_CP047363.1|WP_164953130.1|611919_612861_+|bile-acid:sodium-symporter-family-protein
MLDRINIVLQKYIAVLTLLSLLGGVIFDGYLKQLIFIVPYIFAFMTFSGSIRMKFRDLHIFLEAKGTILYCMFILHVVMPAISYMIASTLFDDHLLVIGFVMLMTVPTGVTSLIWISIGRGDVALGIAVILLDTLLAPIIIPFVLHLVSGTTVEIDTISLVIGLILMIVVPTIIAILLNELTHGKFPDWVGNRLSPFSKIALFLIVLINGSAIGPYVKDMDIELLKIIAVVFVVVVIGYIVAVGSSHFMQHSYARHVSMTFLGGMRNISTGVIVATTYFPPKVAMPVAFGMLFQQLFASIVSTQLEKRRPKEN
>NZ_CP047363.1|WP_164953129.1|610262_611753_+|malate-dehydrogenase-(quinone)
MKRKFKETDVILIGGGIMSATLGVLLKELDPSINIKVFEKLEAAGLESSNVWNNAGTGHSALCELNYTTEDVDGNIDITKASGINEQFQLSKQLWGYLAQQGKLKDPSNFIMPVPHLSFVEGEKNVDFLKRRLKALSDNPLFEGMELTEDHDKMREWVPLMMEGRNPDEKIAITRMEAGTDVNFGALTNDLFDIMTSYDGAVIHYNHTVKDIKRNDDGSWDVKVYDQNHKKTEVHSAKFVFIGAGGYSLPLLQKTKIPEAKGVGGFPVSGLFLVCKDPSIVEQHLAKVYGKAKVGAPPMSVPHLDTRYIDGERALLFGPYAGFSPKFLKTGRYTDLIESVTPGNITNMLSAGAKEMKLTQYLISQVMQNHEARMEELREFVPNAKSEDWEIVVAGQRVQVIKETEAGGKGTLQFGTEVITSEDGSIAALLGASPGASTAVHVMLRVINECFGERMTEFEPRIKEMIPSYGKKLADHPELFKEINQQTSKALGLKEK
>NZ_CP047363.1|WP_164954039.1|609609_610011_+|CAP-domain-containing-protein
MNGERTKRGIAPLYYNSNTSVISGTNTRAYEVTRYFSHYRPNGTLFTTAFAPAVRPYVKGENVMRRALRTGEMPTSDARYLAKMMFEQWKQSPDHLQNMLRTSYKRASISVKVAYDAKAKRNYYYAVQIFTTK
>NZ_CP047363.1|WP_164953128.1|609461_609614_+|hypothetical-protein
MKKLLISTLTSALLFTGVSVSQPSKTDAATVTQFNSGQAVSNYRLNIKVN
>NZ_CP047363.1|WP_164953127.1|608875_609310_-|hypothetical-protein
MSLNHIQNKTSAYYRQAIDIEVDFQFKTSNRIFFPGNHYKDLVDHSYSFTLTVTSNVDEFGLGIDFFEIRRLYNEHIAPTVNAPIINEVLPHINTTVENLCYFLWQSFDKVLPETASIQSIVLSENDTHRAILKREYLNNGGLL
>NZ_CP047363.1|WP_164953126.1|608243_608879_-|pyroglutamyl-peptidase-I
MRRVIVTGFDPFNNETLNPSFEAVRQLPDTILDAEIIKLELPTAFEKGAASLKETIMQNFPEIVICVGQAGGRDKISVEQVAINLIEARIPDNDGVQPSGKTIQEDGENAYFSNLPVKAMVKSIQDHEIPAEISYSAGTFVCNEIMYQLLYMIQNEFPSIRAGFIHVPFAPEQTDTHPSLPIATITEALRHAIEAALTYQEDIKYTTGRIH
>NZ_CP047363.1|WP_164953125.1|606872_608186_+|MBL-fold-metallo-hydrolase
MFFKQFFNEQLAQYSYLVGCQKTGEAIVIDPLRDVTPYIEAAEKEGLRITHVTETHIHADFASGIREVINIGAQGYVSGHGGKDWTYQDIEADIIHEGDVIKVGNVKLEVMHTPGHTPESISLLLYDNGMDVPMGLFTGDFIFVGDVGRPDLLEEAAGIKDTTEVGAKQMFESLKKMDDLPDFIQIWPGHGAGSACGKSLGAVPMTTLGYERANGWAFQIEDEDAFVKALTSDQPEPPYYFAEMKRINRDGVALMHHNIVTPVETITEQAIDLRAKEIYAKNMSEGINVPYNKKFLSFAGWYLDYRHPLQLVGEFDEVQQAAHDLKMIGFDDVHTYVNVADGTAYQSIEPEAFKQLNKDDINILDVRTKKEWNEGHFDGAAHVHYGKLQKTTIPFAKDETIYVHCQSGVRSAIAMSILENEGYTNLINVNGGYAAVK
>NZ_CP047363.1|WP_138070555.1|616946_618425_-|aldehyde-dehydrogenase-family-protein
MSNLLKEQYGLFINGEFKDSAAGETLDVTNPATGEVLAKIAKGTEEDVDAAVKSAQEAFKTWRHTSHNEKAKLLNQIADKMEEHREELAKIESLNSGKAIRESFNIDIPMAIEHFRYFAGVILADEGTNKEVDADVISIIKHEPIGVVGAVVAWNFPMLLASWKLAPALAAGNVVVIQPSSSTPLSLLKFAEIVQDILPKGVLNVVTGKGSESGNAIFNHEDVAKVSFTGSTEVGYGVAEAAAKRIVPATLELGGKSANIIFDDANLEQAVEGAQLGILFNQGEVCSAGSRLYVQEGIYDEFIGKLKDAFEKVRVGDPMDENNHYGSQTGQAQIDKIEEYIEIAKQEGLNIVTGGKRLMDNGRDKGFFFPPTIIEFEDNKSRLVQEEIFGPVVLVSKFKTKEEVIEKANDSEYGLAGGIFTANLNDALQVANAMDTGRIWINTYNQIPAGSPFGGYKKSGIGRETYKDTLRHYQQVKNIYIDYSDKAKGIYQ
>NZ_CP047363.1|WP_164953132.1|618845_619487_+|peptidoglycan-endopeptidase
MKKTALTLTTLATLSTLGTTQADAAAHGRADVAQTSSSVTSIDSSAYNYTYNNNGSYTYTYNNDAPTSVVTQTATQTAAPVVSQLSTTPEVQKAPATTTAVSGNVASVALSVAAGKSYVYGANSAYAVDCSSFAQQVLAAMGKSIPRTTYAQAAAGTQVSTPQPGDLVFFNNYSHVGVYIGGGQMVDALNPSEGVGQRSVSYVSGHVDGYYRF
>NZ_CP047363.1|WP_164953133.1|619601_620060_+|GNAT-family-N-acetyltransferase
MWEYKKFEALTHDEIFQIFKLRIDTFVVEQQCFYPDIDERDLTCIHYFNKEDGKIAAYARIIVDEQTAKLGRVIVNPQFRGRGLARTLIQNGLDYIKDNYPDKEISLSAQAHLKDFYSSFNLSPASDIYFVDLIPHIDMARKPYALDTQLEG
>NZ_CP047363.1|WP_164941731.1|620056_620575_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MNDLKVYISSFLVQDIEFIIASNECGVIYLSNDQTPEYVNRHIERFYNQANKVTGYEADQYHTHYIEDLKLYFAGKQQYLKWPLNLAGTDYQKSIWQTLLTIPYGETRSYSDIALQSGNMKAVRAVGGAIGANPVMIAVPCHRVIGKNGTLTGFSGGLDLKEKLLNIENIQL
>NZ_CP047363.1|WP_138070559.1|620595_620928_+|alkylphosphonate-utilization-protein
MTIPACPKCNSEYTYEDGLNYVCPMCAHEWPQQEIIEETIVRDANGNILSDGDSVTVIKDLKVKGSSSVIKQGTKVKNIKLVDPDNGHDIDCKIDGFGQMSLKSEFVKKL
>NZ_CP047363.1|WP_164953134.1|620924_622061_+|DUF418-domain-containing-protein
MMKRIESIDIMRGISIMGILFMNIVGFHMNEVFTNPLDYFQLPLDRILYYFDILFVHNSFYPIFSFLFGFGLAIMATNIRQRGGNFIPVLYRRVLVLLVFGYIHGLLIFYGDILNVYAVLGMIAILFLLMPNIVSLITAIIIAVIFLLINLMVIITVILSPEAIPFEASDNTAQHWIQVMQSGDFSQILALNQQFFLENFTALSLTGIFGYGFSVLPFILFGMYAMRADMIGFMLKTKRLMMIIAAVSLILGLMIKYYVIYAHLDIYAAQSFIFYGGTLVAICYFIAVVLLTDNQQFYKVMQPFRYAGKMSFTLYILQSICMFVIFYVFRLYAKLNLYEVFIIALLIIIFELAIATYYMKRYKYGPLEWIWRKITYLK
>NZ_CP047363.1|WP_164954040.1|622137_622635_+|hypothetical-protein
MQERLAESILSGNFHIAEDIMNQTDFLEFEELFISACHESESVMYYTFILEQMKKEETVELHDLAFLLLVYPLCEVNGAFDSAYYHAERAVYMTDSKEIKNLLQLLFLYTVPNPVLSDREAFDTAKKILSIDSNNQVARKLMKKAAKQLDQVVVDIKDFNQYKNA
>NZ_CP047363.1|WP_164953135.1|622794_624231_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MKKSTIIMITFLIGAFFTFLNETLLNIALTKIMTVFHVDAPTVQWLATGFMLVMGVLMPLSATIIQWFTTRQLFIGLMSIFLIGTLVAGCATNFPMLLAGRMIQAAGTGLLIPVIMNAMLLLFPPHERGKVMGNFGLVMMFAPAIGPTLSGVIVDTLGWRWLFFAVVPFVLFSIGFAFKYLDNVGEVTKPKVDLFSVVLSTIGVAGIIYGFSSVGNIEGGFSNKAVFLPILIGLISMVIFILRQKQLKSPLLDMSVFKYSNYSKGMFIFVVVVMAMFASEIVMPMYLQGPMEFSAKVAGMILLPGALLNGAMSPIMGRIFDKIGPRKMIIPGMFVLMLVMIFYSTIHPGIPLYIFIIVYMVLMVSISMIMMPSHTNAINQLPKHLYPHGTAIGNMIQPIAGAMGISVFVSIMTHGQQKALEGISNPTHTEIQSALTHGVHHAYWFAIALTVIGFITALFITRSKSPEGETFGLPEEQN
>NZ_CP047363.1|WP_164941734.1|624322_625423_+|hypothetical-protein
MSKGNMESMKIGAAYVGVIVGAGFSTGQEVLKFFTNYGIYSYFAILISGIMLTFFGRQISKVGYGLDVDSHEPTITYLFGEKFGKIIDYILVFFLYAISVIMVAGSGSAFHESFGIPIWLGSLIMIVAVMATLMLDFSKIVSALGLVTPFLIIVVTIIAVYFFFKGHVPLSEVDKYIDPSKQPFKSKFLPEGSLWWFSGLNYGGLAFATGYSMLAAIGSDASKKRIAGRGAFIGGITLLVLLLMVNSGLLSELELIQDSAIPTLVLGRMIHPVLGLALSIIMLMVMYNTIVGLMYSFVARLTTPYSKQYVILLVVSMVIGYALSFVGFVELVGTVYPIMGYVGLILCLGLLFKYIKRKKAGKNHIA
>NZ_CP047363.1|WP_164953136.1|625499_626516_+|alpha/beta-hydrolase-fold-domain-containing-protein
MKKRYLLIIILIALTMMVLALIFGWYEQEEPALNRDTVFDELGVARNVKLIADVKYGNDAPNSEMDIIMPKNIKEGDKLPLIIWTHGGGYIAGDKKHKNAYLARIAERGFIIANMNYALAPAHKYPVPLIQEKQAAQFMKKNTFHLPIDFNQIIIGGDSAGAQIAAQFAALQTNELLRKEMQEEAVFTPDAIKGVILFGGLYNMDTVRATHFPRIEEFMESYTGEKYWERDFKKINQLSVTQHITGKYPPAFLTVGDADPFESQSKELVKVLQENKVPLSTSFFDGSHQLRHQYQFHMNLKESQITYDKVIKFLSEFTDQPLYNTLEEEPLTTKTSSK

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Crispr_ID: NZ_CP047363_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047363_3

2186083-2187096

Orphan

Consensus_repeat	Method
ATCNGTTACTGAATCTGTTACTGAGTCTGTNACTGAATCNGTNNNNNNNNNNNN	CRT

13 spacers

The CRISPR arrays of NZ_CP047363_3

>merge|NZ_CP047363|3|2186083-2187096|CRT
ATCATATAATGAATCTGTTAATGAGTCTGTCACTGAATCTGTTAATGAATCCGTCACTGAATCCGTTACTGAATCCGTTACTGAATCCGTTACTGAGTCTGTCACTGAATCTGTCACTGAATCTGTCACTGAATCCGTTACTGAATCTGTTAATGAGTCTGTCACTGAGTCCGTCACTGAATCTGTTACTGAATCCGTTACTGAATCTGTTACTGAATCTGTTACTGAGTCTGTCACTGAATCTGTTACTGAATCCGTTACTGAATCTGTTACTGAATCCGTTACTGAGTCTGTCACTGAATCCGTTACTGAGTCTGTCACTGAATCCGTTACTGAGTCTGTTACTGAATCTGTTACTGAGTCTGTCACTGAATCCGTCACTGAATCTGTTACTGAATCTGTCACTGAATCTGTCACTGAATCTGTTACTGAGTCCGTCACTGAATCTGTTACTGAATCCGTTACTGAATCTGTTACTGAATCCGTTACTGAATCTGTTACTGAATCTGTTACTGAATCTGTTACTGAGTCTGTTACTGAATCCGTTACTGAATCTGTTACTGAGTCTGTCACTGAATCCGTTACTGAATCTGTTACTGAATCTGTTACTGAGTCTGTTACTGAGTCTGTCACTGAGTCCGTCACTGAATCTGTTACTGAATCTGTTACTGAATCCGTTACTGAATCTGTTACTGAATCTGTTACTGAGTCTGTCACTGAATCTGTTACTGAGTCTGTCACTGAATCCGTTACTGAATCCGTTACTGAGTCTGTCACTGAATCTGTTACTGAATCCGTTACTGAGTCTGTCACTGAATCCGTCACTGAATCTGTCACTGAGTCTGTCACTGAATCCGTTACTGAATCTGTTACTGAATCTGTTACTGAGTCTGTTACTGAATCTGTTACTGAGTCTGTCACTGAATCTGTTACTGAGTCTGTTACTGAATCCGTCACTGAATCCGTTACTGAGTCTGTCACTGAGTCTGTTACTGAATCTGATTCTGATAAATA

>NZ_CP047363|3|2|2186083-2187096|CRT
ATCATATAATGAATCTGTTAATGAGTCTGTCACTGAATCTGT	TAATGAATCCGTCACTGAATCCGTTACTGA
ATCCGTTACTGAATCCGTTACTGAGTCTGTCACTGAATCTGT	CACTGAATCTGTCACTGA
ATCCGTTACTGAATCTGTTAATGAGTCTGTCACTGAGTCCGT	CACTGAATCTGTTACTGAATCCGTTACTGA
ATCTGTTACTGAATCTGTTACTGAGTCTGTCACTGAATCTGT	TACTGAATCCGTTACTGA
ATCTGTTACTGAATCCGTTACTGAGTCTGTCACTGAATCCGT	TACTGAGTCTGTCACTGAATCCGTTACTGA
GTCTGTTACTGAATCTGTTACTGAGTCTGTCACTGAATCCGT	CACTGAATCTGTTACTGAATCTGTCACTGA
ATCTGTCACTGAATCTGTTACTGAGTCCGTCACTGAATCTGT	TACTGAATCCGTTACTGAATCTGTTACTGAATCCGTTACTGAATCTGTTACTGA
ATCTGTTACTGAATCTGTTACTGAGTCTGTTACTGAATCCGT	TACTGAATCTGTTACTGAGTCTGTCACTGAATCCGTTACTGA
ATCTGTTACTGAATCTGTTACTGAGTCTGTTACTGAGTCTGT	CACTGAGTCCGTCACTGAATCTGTTACTGAATCTGTTACTGA
ATCCGTTACTGAATCTGTTACTGAATCTGTTACTGAGTCTGT	CACTGAATCTGTTACTGAGTCTGTCACTGA
ATCCGTTACTGAATCCGTTACTGAGTCTGTCACTGAATCTGT	TACTGAATCCGTTACTGAGTCTGTCACTGA
ATCCGTCACTGAATCTGTCACTGAGTCTGTCACTGAATCCGT	TACTGAATCTGTTACTGAATCTGTTACTGAGTCTGTTACTGAATCTGTTACTGA
GTCTGTCACTGAATCTGTTACTGAGTCTGTTACTGAATCCGT	CACTGAATCCGTTACTGA
GTCTGTCACTGAGTCTGTTACTGAATCTGATTCTGATAAATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047363.1\|WP_164954089.1\|2180223_2180820_+\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_CP047363.1\|WP_164953920.1\|2173041_2179362_-\|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|380149
NZ_CP047363.1\|WP_164953931.1\|2207936_2208683_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047363.1\|WP_164953926.1\|2201841_2203281_-\|EVE-domain-containing-protein	unknown	unknown	unknown
NZ_CP047363.1\|WP_164953915.1\|2168693_2169644_-\|LytR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|181811
NZ_CP047363.1\|WP_164953929.1\|2205666_2206713_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226451
NZ_CP047363.1\|WP_164953922.1\|2182230_2183730_-\|accessory-Sec-system-glycosyltransferase-GtfA	unknown	unknown	gnl\|CDD\|131964
NZ_CP047363.1\|WP_164953925.1\|2201540_2201762_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|366278
NZ_CP047363.1\|WP_164942839.1\|2179752_2179950_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047363.1\|WP_138072581.1\|2205322_2205589_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047363.1\|WP_164953921.1\|2180924_2182238_-\|accessory-Sec-system-glycosylation-chaperone-GtfB	unknown	unknown	gnl\|CDD\|274351
NZ_CP047363.1\|WP_164953927.1\|2203398_2204358_-\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_CP047363.1\|WP_164953930.1\|2207097_2207766_+\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|224191
NZ_CP047363.1\|WP_164953918.1\|2170984_2172430_-\|Na+/H+-antiporter-NhaC	unknown	unknown	gnl\|CDD\|188097
NZ_CP047363.1\|WP_164953916.1\|2169766_2170381_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP047363.1\|WP_164953924.1\|2191083_2201148_-\|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|375438
NZ_CP047363.1\|WP_164953928.1\|2204496_2205111_+\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|366169
NZ_CP047363.1\|WP_164953917.1\|2170521_2170956_+\|winged-helix-DNA-binding-protein	unknown	unknown	gnl\|CDD\|224759
NZ_CP047363.1\|WP_164953919.1\|2172570_2172714_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047363.1\|WP_164953932.1\|2209444_2210443_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP047363.1\|WP_164954089.1\|2180223_2180820_+\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	1.20868e-53
NZ_CP047363.1\|WP_164953915.1\|2168693_2169644_-\|LytR-family-transcriptional-regulator	gnl\|CDD\|181811	PRK09379, PRK09379, LytR family transcriptional regulator.	2.88867e-96
NZ_CP047363.1\|WP_164953929.1\|2205666_2206713_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|226451	COG3942, COG3942, Surface antigen [General function prediction only].	1.17742e-33
NZ_CP047363.1\|WP_164953922.1\|2182230_2183730_-\|accessory-Sec-system-glycosyltransferase-GtfA	gnl\|CDD\|131964	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. [Protein fate, Protein modification and repair].	0
NZ_CP047363.1\|WP_164953925.1\|2201540_2201762_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|366278	pfam00746, Gram_pos_anchor, LPXTG cell wall anchor motif.	7.11332e-08
NZ_CP047363.1\|WP_164953924.1\|2191083_2201148_-\|YSIRK-type-signal-peptide-containing-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	8.27054e-16
NZ_CP047363.1\|WP_164953921.1\|2180924_2182238_-\|accessory-Sec-system-glycosylation-chaperone-GtfB	gnl\|CDD\|274351	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. [Protein fate, Protein modification and repair].	3.52809e-151
NZ_CP047363.1\|WP_164953927.1\|2203398_2204358_-\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	5.03322e-81
NZ_CP047363.1\|WP_164953930.1\|2207097_2207766_+\|hemolysin-III-family-protein	gnl\|CDD\|224191	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only].	3.70989e-62
NZ_CP047363.1\|WP_164953918.1\|2170984_2172430_-\|Na+/H+-antiporter-NhaC	gnl\|CDD\|188097	TIGR00931, Uncharacterized_Na+/H+_antiporter_HI_1107, Na+/H+ antiporter NhaC. A single member of the NhaC family, a protein from Bacillus firmus, has been functionally characterized.It is involved in pH homeostasis and sodium extrusion. Members of the NhaC family are found in both Gram-negative bacteria and Gram-positive bacteria. Intriguingly, archaeal homolog ArcD (just outside boundaries of family) has been identified as an arginine/ornithine antiporter. [Transport and binding proteins, Cations and iron carrying compounds].	1.83712e-130
NZ_CP047363.1\|WP_164953916.1\|2169766_2170381_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	0.00438876
NZ_CP047363.1\|WP_164953920.1\|2173041_2179362_-\|YSIRK-type-signal-peptide-containing-protein	gnl\|CDD\|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	1.03987e-94
NZ_CP047363.1\|WP_164953917.1\|2170521_2170956_+\|winged-helix-DNA-binding-protein	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	1.10725e-14
NZ_CP047363.1\|WP_164953928.1\|2204496_2205111_+\|thermonuclease-family-protein	gnl\|CDD\|366169	pfam00565, SNase, Staphylococcal nuclease homolog. Present in all three domains of cellular life. Four copies in the transcriptional coactivator p100: these, however, appear to lack the active site residues of Staphylococcal nuclease. Positions 14 (Asp-21), 34 (Arg-35), 39 (Asp-40), 42 (Glu-43) and 110 (Arg-87) [SNase numbering in parentheses] are thought to be involved in substrate-binding and catalysis.	1.93616e-31

>NZ_CP047363.1|WP_164953922.1|2182230_2183730_-|accessory-Sec-system-glycosyltransferase-GtfA
MTIYNINLGIGWASSGVEYAQVYRASMLRNLKQDAKFVFLDFINSENIQTYTENIGFKDDEIIWLYQYFTDIKIAPTSYTTKDLMKTINAPATNIVIKGKIKTIYLGSEQTYVRCFLKNQNEDIIDRVEYVVNHKLIKKDFYTYTKLCTEYYAPDNGAKLYMRKFYNEDGTIAYREYIDKEDSLFEINDEKLYSKQEFVAYFMKSLNLTAEDIIILDRGKGVAQPIIQNKGKSRLGVVVHAEHFNETNTNENIVLWNNFYEYQFQNHRHVDFYITATERQKQKLASQFKHYLKVEPKIYTIPVGSLKRLSKHSSRRPNSLITASRLAKEKHLDWLILSVIKAKSEIKDLTFDIYGEGSQRQMLDNLIRKHNASSYIKLKGHVHLESVYHQYEVFLSGSTSEGFGLTLMEAIGSGLGMIGLNVEYGNTTFIKNMENGILVDYVHDQDDSNEIVEKLSRAIVEIFTADMNYEAASYKIAQAFLTERIEEKWDMLIEEVLND
>NZ_CP047363.1|WP_164953921.1|2180924_2182238_-|accessory-Sec-system-glycosylation-chaperone-GtfB
MINLFYVFNKASLELYQSFKNARLSATTVVVEDSGFLPADILTPYLFFSDFKVEPHARPKFFNEIKVPEFWEIHGSNQVANIYNLGEVKANIQYHSHPQPRAVHKVEWLDKNSVRFVDIYNQYGHRFSQEVYSSEGKRLFKSYYNQKNEEIIYENLVTQQVILKWKQKEYIFDSKTKFVQFYLEESGMDDSVLNINSLGIPYFVSIGLGQGHTNLIWQEQVNDNIPGNMLNMLSVQNNRTYTLLIPDRNEYERVISRLPHALTAKVKPFGYVYHFKRNQQYSKNVLIATNSDQLINFAAIAEQCPEYTFHIVAITEMSNTLIQYDQYKNVKLYPKASKATFNHLFEICDVYLDINKGNELHSAVRRAFNSNLIIFSFVSIAHNKDVILKEHIFEETQVTELTRYMNQLTEEQRDHLIELQHRHANHIKISNFIDAIK
>NZ_CP047363.1|WP_164954089.1|2180223_2180820_+|CatB-related-O-acetyltransferase
MGAFSSTLSELPVNTVVGRYTSIASNVKRMHGNHPTDRFTTSMFTYDSNATAFTQYEKDYEATFERELYSPLLNPVVIGNNVWIGQDVLFSNKGITVGDGAIIAAGSIVTKDVPPYAIVGGNPAKVIKYRYDDKTIEHLTKLKWWQYAYGDFKGIHATDDIDTFIYQLEALIAKNAIHPFKPDVTTCEDFEAVTSNSV
>NZ_CP047363.1|WP_164942839.1|2179752_2179950_+|hypothetical-protein
MSIHDNDRNKSLEEINKEIEQQLLDESENPPEEKKKYPSFLSLSALVSFIILCMILYRIVKLFIQ
>NZ_CP047363.1|WP_164953920.1|2173041_2179362_-|YSIRK-type-signal-peptide-containing-protein
MKKMNFLANKQNKYSIRKFTVGTTSILIGSLMFLGSEGNVRAAEVSTETVTTETPTTEAPTTEEVTTESVTTEAPTTEEVTTESVTTEAPTTEEVTTESVTTEAPTTEKATTESVTTEAPTTEEVTTETVTTEAPTTEEVTTETVTTEAPTTKSEGLAPAIDLSSTVNDLNTVSTIAEKEKVLTEVMQDAGISSQNIDIAIKDLNLNNNVLNEEEVLSALLKAIASEQNTNEVTVTPVSLTTNRSLMNSISLGSLNNINTLVSQGLITVNNVSTIDSGYSNGSATVEAADRVVKPNLGESFKVDIDFTIDPSVQSGDTFTLSLPNEATISDLHPEVFDVPDLVGGNGKVIATGVYDYATKSITYTFNSEVLNQSDLSGSISLGQYIDRNVVSNEATVALNYNIDGNSFVQPAFDVKYPSTANVSELPSNIDTTYVSYDENTGELKQLIYYNPLQIESYGQTLYVQGFESKTTPDSSAAKIDTNTQFKIYEIPDGYVVPDSLIINDYSGLVDVSNNYSWDYYAGDFAATRFTDNYTPSTQRYLIEVTSYVDLQLANSVVIQQEALMGSYPQPPVNGEQPIAAGHSNIISTIQSGSNITGTYAIGDFIFEDTDKDGTQTGSAPIAGVTVTLKDEVGNVVGKPIISGKDGSYLFTGLTNGNYTVEFSKPAGYTPILPNQGGDTANDSDITADANGVLSAPVTINNANALTIDAGFVKEQPTTPTYTLGNYTFLDLNGNGIQDAEDAPFEGVKVSLFEADGVTPVYNDKGEAYSLYTDANGIYEFTGLSNGDYVVKFDLTENPGLVGTVADVDNNDSDGLDSDGIRKDLTPIYFAKATIQDENNLTVDFGLNFGYEIGDYVFEDQNHDGIQDPTEPGIAGVTVTLTKPDGTTVTTTTDSNGGYTFTDLPKGTYTVTFDTPPNYVPVQENQGTDDTKDSDPVFNSTKTQGSVTVDLTDNNPTIDAGFEKAVYKIGDRVWEDNNNNDILDAGDTGIAGVTVTLKDASGNVIATQVTDANGNYLFEGLTNGDYTVEFGTPADSAFVPVKDNVGTSDMDSDPSTVAVTINNADNLTIDRGFEKLLTIGDKVFEDQNHDGIQDPTEPGIPGVTVTLTKPDGTTVTTTTDSNGGYTFTDLPKGTYTVTFDTPPNYVPVQENQGTDDTKDSDPVFNSTKTQGSVTVDLTDNNPTIDAGFEKAVYKIGDRVWEDNNNNDILDAGDTGIAGVTVTLKDASGNVIATQVTDANGNYLFEGLTNGDYTVEFGTPADSAFVPVKDNVGTSDMDSDPSTVAVTINNADNLTIDRGFEKLLTIGDKVFEDQNHDGIQDPTEPGIPGVTVTLTKPDGTTVTTTTDSNGGYTFTDLPKGTYTVTFDTPPNYVPVQENQGTDDTKDSDPVFNSTKTQGSVTVDLTDNNPTIDAGFEKAVYKIGDRVWEDNNNNDILDAGDTGIAGVTVTLKDASGNVIATQVTDANGNYLFEGLPNGDYTVEFGTPADSAFVPVKDNVGTTDVDSDPSTVAVTINNADDLTIDRGFEKLLTIGDKVFEDQNHDGIQDPTEPGIPGVTVTLTKPDGTTVTTTTDSNGGYTFTDLPKGTYTVTFDTPLNYVPVQENQGTDDTKDSDPVFNSTKTQGSVTVDLTDNNPTIDAGFEKAVYKIGDRVWEDNNNNDIQDAGDTGIAGVTVTLKDASGNVIATQVTDANGNYLFEGLTNGDYTVEFGTPADSAFVPVKDNVGTTDVDSDSSTVAVTINNADDLTIDRGFEKVTPPVTPVYKIGDRIWEDNNNNDIQDAGDTGIAGVTVTLKDASGNVIATQVTDANGNYLFEGLANGDYTVEFGTPADSAFVPVKDNVGTTDVDSDPSTVAVTINNADNLTIDRGFEKVTPPVTPVYKIGDRVWEDNNNNDIQDAGDTGIAGVTVTLKDASGNVIATQVTDENGNYLFEGLPNGDYTVEFGTPADSVLVPVKDNVGTSDVDSDKAVVAVTINNADDLTIDRGFEKPEITPEPKPEPQPEPKPEPQPEPKPEPQPEPKPEPQPEPKSEVQPELQQKPDTQVSKRDGIKHAHPTDSHHGKYDNAGKAHEVKELPDTGESNNNGLNAALALAVGGFTLMLTRRKREE
>NZ_CP047363.1|WP_164953919.1|2172570_2172714_-|hypothetical-protein
MSIEYNMIYDLFLQMFVGPNNAIAASFIIIMGMAVMIIIDKFRSDEE
>NZ_CP047363.1|WP_164953918.1|2170984_2172430_-|Na+/H+-antiporter-NhaC
MSKEKKVIERKNINVFWALVPLFIMIVCMLFWVVKLKQAPHIPLMIGTAVAAIVAHRHGFTWGQIEEMMYRGIKMALPAIVIIILVGLVIGAWIGGGIVATMIYYGLKMISPAMFLVTICLICGIVALAIGSSWSTMATVGVAGMGIGLSMDIPAGMIAGAVISGSYFGDKMSPLSDTTNLASGLTGTDLFDHIKHMFFTTIPGMIIALTAYFFIGRQFSGGHLDTAKIDAITKAMEAQFVLSPWLLLVPVAVIVLVALKVPAVPALVVGIILGSGCQFFVQGDSLDFIAKTLQEGYEMKSDNALVTELFNKGGLESMFFTISMTIVAMTFGGILEFSGMLEALISKILLVAKSTGSLIAATLISCFTVNATCSEQYISIVVPSRMYLKAFIDKGLHPKNLSRCLEDSGTLTSVFIPWNTCGVFILATLGVGVGEYAPYAILNFVVPIISIIYGYTGFKIVKINKEEQQEFLRQQVQPAEL
>NZ_CP047363.1|WP_164953917.1|2170521_2170956_+|winged-helix-DNA-binding-protein
MIKIELSIFKTASQIESFLNPEFLEEFGITFTEFLILYKVYKDSDSSVADIQDDIQYKMDSASKKTKKLRDLGLVVKERRKDDERKVCVKITDDGREIVKRVMEYQQRIYNSAEDTFTKEDGETLFLLLHKYRKAFHQYRDTIN
>NZ_CP047363.1|WP_164953916.1|2169766_2170381_-|GNAT-family-N-acetyltransferase
MKIKFAMHSDIQAILDVQQAALKEMSNEDMLVTLSEEEITQNVNDGVLCICQVDGRTAAFRSMHIPREDYLGKYIGLDPADRDKLIYSDITIVHPDYRGRGLQKVLGEWLFQAIDNKYKIIMATVHPDNIASIKDKFHHGMKIVAIDNVYGKKVRYVFVLFRDKDCKNEDEVAVEMTDDKEIRQLLSEGYKGVALRNNLLIFTK
>NZ_CP047363.1|WP_164953915.1|2168693_2169644_-|LytR-family-transcriptional-regulator
MEKRKKKRFGCLSIFLIVFVLMLLVAAWFVGGSYFKVKQTAEQIQHKIEGRDKSELRGDKVDIGNKDAISVALFGVDSNQQRLATGDAGRSDSIILMSINPKTNQSQMVSIPRDTYSEMVGKGTNEKIAHAYAYGGAKMAVASVEKFMNVPIDYYATINMDGMHEMVDKVGGIDVVSNSTFSYGGINFVKGQEIHLDGDGAMAFIRSRKQEGAGGDFGRQERQQLVIQALATKVLSVDSLTKLDSLLKSVEGNVVTDLSFDELKGLATGYNGAVRNVKKVQLQGDGAILEDGLWYFLPNESLKADVREQYMKNLGL
>NZ_CP047363.1|WP_164953924.1|2191083_2201148_-|YSIRK-type-signal-peptide-containing-protein
MNKKSTNKRMDFLPNKLNKYSIRKFTVGTTSILIGSLLFLGTSTDSKAAETTVASTEAATTETPTTEAPTTETVTTETPTTEAPTTESATTEAPVVVEKATNLTFNADNTQLTGQATGQTVELKLADGTVKTATVQSGTFTFTGLTVNSGDVVEVTVIGSDNTRSEVAQATANVVEAPTTEAPTTEAPTTEAPTTEAPTTEGATTETPTTEAPTTEGATTEAPSTESATTETPTTEAPTTERATTEAPTTEVPVFEPTTESVTATTEKLNALTTEAEKKAELTNYVVENTGVTEETALATIDGLNLDYSNLTSEELLAALLQGIAANQDANTVEATAVSQRSAFTNSESVTLDLNGTINTLTATANDGVNDALPYSSNYTFQTILFDPADLTGSVAEGTTIPFTIDSYMTGANSGDRYKIDLTIDPIIAAHVTKITVNPAGRTTPVELLRINNADGSLSNIWEVNYIRASGGLFGGAEILANKTATNGIIELDTTINEILASAGDLSNDKLDYRIYVRDSEQNTIIRTADSSGFFATAVDVSETSLTPSTSATANRQFLAADGSAQYDSTIGTNGAIVIDQMIMKNGIFDYNLSTSTGIDTKSWKYVFNIDKDLLPYISTLDLYQLDFQGVTGFDKTFDTSDFVTSLTYDANGTVTITGTNMNNFIEFNNSTPETIGIRFVANLNTSVNNIITRDAQYDSAGNLIGETSRVKEQFNFYGYFTDKNNGYINNTFGSSTYYMQDQDLDGLTDNYELYNSKTDPQNADTDGDQKNDGDEILRYLTDPLVGLPAAGNIQMTETVVSGFVPLAPNAGTQTAKVLDSAGNVIGTSTVAADGSFNVTIPQSAPGTYTIAIDSENAVNDEVSKFLIVDNTVIPSPSIAAVDDNDLSIRVSGTAGSTVTVIDAAGNTIGTVKIPADGSLGIINLSNPLPAGTVLTATALKDGKTSAVSDAVTVKDATAPVIAPIGNKTVPEDQQIAPIQITVDDPNAKIFVSELPDGLVYDSVSKTISGTPTTPDSSVITITADDGNGNISKSTFTITVTDKTAPTIKPPANVETPEDQEITPIVLQVDDPAASITVEGLPEGVFYDAEHRTIDGIPTTPGTYTVTITAKDLDENVSVSTFTFVVTDKTAPIVTEIENQSIQLGNAIQSVTITTDDPTAEITVSQLPDGLTYDADSKTISGTPTAVGNYPIEVAVKDLAGNETIENFSISVTDSQAPSITPLADRAYPEDAAIEPFVITTNDPTATISVTNLPVGLTFDSGTNTVSGIPTTPMTNTVTVTARDPEGNVSTSTFVIKVLDKTPPVIAPIPNITVPEDKEITPFTIKTEDNSDIIAVNNLPAGVYYDPATDLVSGTPVTPDVYTVEVIARDTAGNIATKTFIFTVQDKTAPEITPIENIEVPEDVLITPITITTNDPAAKLSVTGLPGGVTFDTSTNKISGTPVEPGKYLIEVRALDVNGNESVTSFLMTVIDKTPAPAPVINAIDSDDTVVTGTGMPGEALTVSFPIVQDGTIIGYVTSTTTVPQDGIWTLPIPPGVDLQGGEQLIATSKDAAGNISPEGSIVVKDVTAPVIHKPEDITVNQNEQIQVIDVSTDDPKAIEVVQGLPDGLSFNTKDGTITGTPIVSGEFPITVTATDSDGNSSTITFVITVKDTVPPTVTPIEDAVVPEDIEMFIPILIEDETAVITTTGLPEGTSYSAEKQGIVGIPTEPGIYTVTVTAKDSANNTSSETFILEVTDETAPVITPIANQSIPEDQPATILVETDDSKATVTVTGLPSGMKYDAVTSSITGTPITPGTYPIIITASDGDGNQSSVEFELIVTDETPPVINQNEDVEVPEDQPIQPIKIVSDEVATVTVEGLPDGLQFNAGTNEITGTPTTPGIYVITVIETDAADNTATETFKIIVTDETAPILPQISDIEVPEDRAIAPINVLSDDASAVEIVTGLPAGVTFDSATGIISGTPANPGVYNVVVKATDSEGNSSTETFTITVLDKTAPVIRQKANRILPEDQPVPPLYVVVDDPSAQLEFIGFPEGLSYDPDTKMIIGTPTTPGIYNMTIRATDAAGNVSEMFFQFIITDKTAPIIQPIGDVHLAEDIALQAIPVKTDDADATITVSGLPDGVIYNEQEQTITGVPTTPGVYTLTVTATDSVGNQSTETFVITVDDTTAPVILQKTDKFVPEDQPIPTYYITVDDPKANITVSRLPEGLKYNADSKTITGTPITPGVYPIEVRATDDSNNSAIMTFTITVEDKTPPLAPLINDVTSEDAVITGTGTEGNTIRVVFPDGLVATAVVDSEGQWSVTIPENEDLVGGEELSVSEDDPSGNRSELSYTTVIDKTPPEAPLVNMVNSEDFVVTGTGTPGDTITVTFPDGTTATGVVQPDGTWTVNIPSGVDLTGGETLPVTATDKDNNVSPATKVVVDDVTAPSAPAVNPVNSDATAVTGTGTPGDTITVTFPDGTTATGVVQPDGTWTVNIPSGVDLTGGETLPVTATDKDNNVSPATNVVVDDVTAPSGPAVNPVNSDATAVTGTGTPGDTITVTFPDGTTATGVVQPDGTWTVNIPSGVDLTGGETLPVTATDKDNNVSPATKVVVDDVTAPSAPAVNPVNSDATAVTGTGTPGDTITVTFPDGTTATGVVQPDGTWTVNIPSGVDLTGGETLPVTATDKDNNVSPATKVVVDDVTAPSAPAVNPVNSDATAVTGTGTPGDTITVTFPDGTTATGVVQPDGTWTVNIPSGVDLTGGETLPVTATDKDNNVSPATKVVVDDVTAPSAPAVNPVNSDATAVTGTGTPGDTITVTFPDGTTATGVVQPDGTWTVNIPSGVDLTGGETLPVTATDKDNNVSPATNVVVDDVTAPSGPAVNPVNSDATAVTGTGTPGDTITVTFPDGTTATGVVQPDGTWTVNIPSGVDLTGGETLPVTATDKDNNVSPATKVVVDDVTAPSAPAVNPVNSDATAVTGTGTPGDTITVTFPDGTTATGVVQPDGTWTVNIPSGVDLTGGETLPVTATDKAGNISIPTYVTVEDVLVPPVDTDGDGIPDDVDTDDDNDGVNDSDEIAAGLDPKNPDTDGDGINDGQEDTDGDGISNDDESVDSGTTVTDTDGDGIPDIVDPATVPPVDTDGDGIPDATDTDDDNDGVSDSDENVVGTDPLNPETTPGTPDGSIDTDGDGINNGDESDETLPNPTDKDGSGIPDIVEKPTTPPVDTDGDGIPDDVDTDDDNDGVNDSDEEAAGLDPKNPDTDGDGIKDGAEDTDGDGINNDDESVDSGTTITDEDGDGVADIVDNDKQTVPSKPGKPSHGHHVGSKQEKPSQNVLPDTGEAENNGAAGLVAAIGGFALLAARRRRQEDVQTEEK
>NZ_CP047363.1|WP_164953925.1|2201540_2201762_-|LPXTG-cell-wall-anchor-domain-containing-protein
MDNDKQSVPTKPEKPSYGHHVVGSKQEKSSQNVLPDTGEAENNGAAGLVAAIGGFALLAARRRRQEDVQTEEK
>NZ_CP047363.1|WP_164953926.1|2201841_2203281_-|EVE-domain-containing-protein
MNYFWLNCGYNRFNHFEDLMNQVSVFDSTVHFNPNEGYQAFKRANPGDRVIFYLVQNKIGLLGAGEVLKVEEPRRGQIKIHFKYDTKLAPFTKDYLIRDEKLKETIQSMKEQLLNPISEDDYHKIINVGQYKEKINRYFIMKEETPFEAGMEYTVYVSNVNGMNRLGYKHYGEMQPEDKVIIYKTQPERGIYGIAEVVKGKHGNKPVAGRTDTTAVIIKYIEDITPRTIYELDRELMLRAQYFLDEKWNEAVTEITKNQYKAMLEPSETPAVQKAPSINQVIEAAQYSARKVAMEKKYNETKQKKNDDTKEIAVKHHGLTHQRKLFHIFSLPEYVDGATTAINFLKLNRQAVKIYIADGTWKQANVYGEYIKDKEHYTYHRGIITEALASEVPDSIIIENFEHLTVEQLKPLIYAAQGTTVALPILEDQRRATIGPEGSEATFEVPDDFIIIGITDNDVDTIKEKYPDYVTATMKFYKY
>NZ_CP047363.1|WP_164953927.1|2203398_2204358_-|putative-sulfate-exporter-family-transporter
MKLKGITLCLLVALIATCLGYIFPLIGSMIFSIIIGILIGNFINIETYEEGIKYSGKKLLQYGIILMGFTLSFKTAINLGASSFPLIITSIAAALIVGILGGRLFNINQRISTLIGVGTAICGGSAIAAMSPIIKAKDEEIAFSIATIFFFNIIAVFIFPTAGHWLQLSDTGFGYFAGTAINDTSSVVAAGYAFSGHAGDTATVVKLVRALMIVPICILFALLQTGYSSVNLKKVFPWFILYFFLASIIASIMPIPAYVTSSIKLLSTFLMSTALAGIGMTVNIRKFFEIGVKPLGLGAITWMVVIVMSLFMQQLLHIW
>NZ_CP047363.1|WP_164953928.1|2204496_2205111_+|thermonuclease-family-protein
MNLLLFLTLNFSSLQSDMPKIPATFDHAIDGDTVSVKVNNRKKTVRLLLIDTPESKKPKTPVQPYSIEAARYTESLIKTCDLSVQYDTKGKTDRYGRDLVYLYCGNTMINEQLVRQGYARVGYVYQQKDHLNRMLAAEQKAKAESLKIWSIKGFVNVDGEGFNSTEEERQQETDIVLMIREALHRILDAAIDGLIKGLKSIFTS
>NZ_CP047363.1|WP_138072581.1|2205322_2205589_+|hypothetical-protein
MRKLEDYRALKKELAKWNSMTPTSYAGSIARTNKIKMLKRQLCNDQYDEADARNDELLLRHEIKSLHIELARIERQLLDKYQELNSIS
>NZ_CP047363.1|WP_164953929.1|2205666_2206713_-|LysM-peptidoglycan-binding-domain-containing-protein
MKKKLIFAATTATVAASAYSYQADAAEHRVKAGESLWSIANQYNTSVAQLKTLNNLSSNLIFPNQSLQVSGSVSNTTRPTAVQTVNRPAVQNGSGNTYTVVSGDSLSLIAYRYNTSVNEIMRLNNLTGYLIFPGQRLKVPGSAPTTAVSTATRPTTVSTTRAVSHVVQPGEYLSLIANRYGITVAQLKSLNGLTSDLIFPNQRLVVKGNAVQSTTAVRPVVSRAPVSTTVASFATPVFAHANLYDYGQCTWYVFNKRASAGKGISTYWWHARNWANSAIKDGYTVNRTPAYGAIAQTSDGYYGHVAFVERVNADGTILVSEMNYATGVGVIGYRTLNQWQVSRYVFIH
>NZ_CP047363.1|WP_164953930.1|2207097_2207766_+|hemolysin-III-family-protein
MKPTAPKYNFHDIKELKFGEEIGNSVSHGVPALLILFSLPYFAVQSYIQHGSLFSFGISIFLISIFLMFISSSIYHLMPPKSTHKLVMRIIDHAMIYIAIAGTYTPVALNLVGGKLGLSIMIIQWVITIAGIVYKATAKHVNPKISLAMYLVMGWLGIVLFPSLINKASLTFILLIIAGGLMYTIGAWFYAQKNRHYFHMIWHFFIILGALCHFIALLYFIQ
>NZ_CP047363.1|WP_164953931.1|2207936_2208683_-|hypothetical-protein
MKLLKYQCSLIILLLTACSQNTEKTSDIVKQSTTNAQESTSVKQTYEVAYKVLAQSTMKQLMKKMPDAYNTHQYKLIQPYIKERSEAEKYIKNKLKTEMFDNYHIKSYKIDSVKEDKKHHVHVKVTRIMTSNGTNNVESKVVTVYDLVYNKKHKRMEVYDFNDQSVTPVTKHQAQQVSNIEDAIEKVKSEHMARLIKENPDKQVILIAGDDEEDAGGSYFKVKAIDKNSEFLIQTFKVYKHNGLLVGE
>NZ_CP047363.1|WP_164953932.1|2209444_2210443_-|hypothetical-protein
MAHTVQNLTWYLEALSKEELKDICRNFDIKGFSSKNKDELIELIQSTYFEDDQLLTRLLQELSSDHKLIFYELAVSDDDTVPFNRDIPDTLFLFYPEADEHLVIPKDVKKHFKQYIEKHPEIERDIQLIEFYHSAFNLYGFVSLKQLAKLQYKYKGLQKDEQTIEEEIRRLLPEYKELIQDKSVKHRDLAQVNLNMKALTHGKKYYEPATESEFLNYNDPYFTEPSEAVESLRTLLNKMVTEEYAGTYTAQLIIDTIIFGLRANDTPEFIMKHIQQIEDSGFIKVEGAALSDSIDHAINDTRLWSLNGHKKQQKRERKVVQVKQKKKKRKKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP047363_1	1.3\|409623\|18\|NZ_CP047363\|CRT	409623-409640	18	NZ_CP047363.1	768452-768469	2	0.889
NZ_CP047363_1	1.6\|409743\|18\|NZ_CP047363\|CRT	409743-409760	18	NZ_CP047363.1	768452-768469	2	0.889
NZ_CP047363_1	1.11\|409943\|18\|NZ_CP047363\|CRT	409943-409960	18	NZ_CP047363.1	768452-768469	2	0.889
NZ_CP047363_3	3.4\|2186329\|18\|NZ_CP047363\|CRT	2186329-2186346	18	NZ_CP047363.1	632555-632572	2	0.889

1. spacer 1.3|409623|18|NZ_CP047363|CRT matches to position: 768452-768469, mismatch: 2, identity: 0.889

accagcacctcattctgc	CRISPR spacer
accggcacttcattctgc	Protospacer
***.****.*********

2. spacer 1.6|409743|18|NZ_CP047363|CRT matches to position: 768452-768469, mismatch: 2, identity: 0.889

accagcacctcattctgc	CRISPR spacer
accggcacttcattctgc	Protospacer
***.****.*********

3. spacer 1.11|409943|18|NZ_CP047363|CRT matches to position: 768452-768469, mismatch: 2, identity: 0.889

accagcacctcattctgc	CRISPR spacer
accggcacttcattctgc	Protospacer
***.****.*********

4. spacer 3.4|2186329|18|NZ_CP047363|CRT matches to position: 632555-632572, mismatch: 2, identity: 0.889

tactgaatccgttactga	CRISPR spacer
tattgcatccgttactga	Protospacer
**.** ************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047363_3	3.6\|2186461\|30\|NZ_CP047363\|CRT	2186461-2186490	30	NZ_CP026691	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM9, complete sequence	7490-7519	5	0.833
NZ_CP047363_3	3.1\|2186125\|30\|NZ_CP047363\|CRT	2186125-2186154	30	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1159520-1159549	6	0.8
NZ_CP047363_3	3.3\|2186257\|30\|NZ_CP047363\|CRT	2186257-2186286	30	MK250029	Prevotella phage Lak-C1, complete genome	118908-118937	7	0.767
NZ_CP047363_3	3.3\|2186257\|30\|NZ_CP047363\|CRT	2186257-2186286	30	MK250016	Prevotella phage Lak-A1, complete genome	158682-158711	7	0.767
NZ_CP047363_3	3.3\|2186257\|30\|NZ_CP047363\|CRT	2186257-2186286	30	MK250019	Prevotella phage Lak-A2, complete genome	81729-81758	7	0.767
NZ_CP047363_3	3.6\|2186461\|30\|NZ_CP047363\|CRT	2186461-2186490	30	MK250029	Prevotella phage Lak-C1, complete genome	118908-118937	7	0.767
NZ_CP047363_3	3.6\|2186461\|30\|NZ_CP047363\|CRT	2186461-2186490	30	MK250016	Prevotella phage Lak-A1, complete genome	158682-158711	7	0.767
NZ_CP047363_3	3.6\|2186461\|30\|NZ_CP047363\|CRT	2186461-2186490	30	MK250019	Prevotella phage Lak-A2, complete genome	81729-81758	7	0.767
NZ_CP047363_3	3.5\|2186389\|30\|NZ_CP047363\|CRT	2186389-2186418	30	NZ_CP016283	Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence	75959-75988	8	0.733
NZ_CP047363_3	3.6\|2186461\|30\|NZ_CP047363\|CRT	2186461-2186490	30	NZ_AP018723	Thiomicrorhabdus aquaedulcis strain HaS4 plasmid pTmrp1, complete sequence	4790-4819	8	0.733

1. spacer 3.6|2186461|30|NZ_CP047363|CRT matches to NZ_CP026691 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM9, complete sequence) position: , mismatch: 5, identity: 0.833

-cactgaatctgttactgaatctgtcactga	CRISPR spacer
agagttaat-tgtttctgaatctgtcactga	Protospacer
  * * *** **** ****************

2. spacer 3.1|2186125|30|NZ_CP047363|CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

taatgaatccgtcactgaatccgttactga	CRISPR spacer
cactgcctccgtcactgaaaccgtcactga	Protospacer
.* **  ************ ****.*****

3. spacer 3.3|2186257|30|NZ_CP047363|CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 7, identity: 0.767

cactgaatctgttactgaatccgttactga	CRISPR spacer
acttaaatctgttactaaatctgttactgt	Protospacer
  .*.***********.****.*******

4. spacer 3.3|2186257|30|NZ_CP047363|CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 7, identity: 0.767

cactgaatctgttactgaatccgttactga	CRISPR spacer
acttaaatctgttactaaatctgttactgt	Protospacer
  .*.***********.****.*******

5. spacer 3.3|2186257|30|NZ_CP047363|CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 7, identity: 0.767

cactgaatctgttactgaatccgttactga	CRISPR spacer
atttaaatctgttactaaatctgttactgt	Protospacer
  .*.***********.****.*******

6. spacer 3.6|2186461|30|NZ_CP047363|CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 7, identity: 0.767

cactgaatctgttactgaatctgtcactga	CRISPR spacer
acttaaatctgttactaaatctgttactgt	Protospacer
  .*.***********.*******.****

7. spacer 3.6|2186461|30|NZ_CP047363|CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 7, identity: 0.767

cactgaatctgttactgaatctgtcactga	CRISPR spacer
acttaaatctgttactaaatctgttactgt	Protospacer
  .*.***********.*******.****

8. spacer 3.6|2186461|30|NZ_CP047363|CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 7, identity: 0.767

cactgaatctgttactgaatctgtcactga	CRISPR spacer
atttaaatctgttactaaatctgttactgt	Protospacer
  .*.***********.*******.****

9. spacer 3.5|2186389|30|NZ_CP047363|CRT matches to NZ_CP016283 (Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence) position: , mismatch: 8, identity: 0.733

tactgagtctgtcactgaatccgttactga	CRISPR spacer
cgcagcgtccgtcactgaatccgttacctt	Protospacer
..* * ***.*****************.

10. spacer 3.6|2186461|30|NZ_CP047363|CRT matches to NZ_AP018723 (Thiomicrorhabdus aquaedulcis strain HaS4 plasmid pTmrp1, complete sequence) position: , mismatch: 8, identity: 0.733

cactgaatctgttactgaatctgtcactga	CRISPR spacer
aactgaatttgttactgaatttgtaaacct	Protospacer
 *******.***********.*** * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

703626 : 712262

Acinetobacter_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164953171.1\|703626_704535_-	YegS/Rv2252/BmrU family lipid kinase	A0A1V0SBJ0	Catovirus	1.1e-11	26.1
WP_164953172.1\|704620_706132_-	MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.9e-71	34.4
WP_138070636.1\|706407_707922_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.3e-75	37.6
WP_164954045.1\|708079_708580_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	8.5e-51	65.8
WP_164953173.1\|708590_709445_-	EamA family transporter	NA	NA	NA	NA
WP_138070637.1\|709804_710194_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.0e-35	56.8
WP_138070638.1\|710156_712262_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	82.0

DBSCAN-SWA_2

940058 : 948449

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164953266.1\|940058_940541_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	7.5e-20	42.8
WP_138070829.1\|940527_941646_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_138070830.1\|941642_942344_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3HWF9	Synechococcus_phage	2.3e-46	41.6
WP_086042217.1\|942346_942607_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_138070831.1\|942606_943269_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_164953267.1\|943271_945458_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	7.4e-139	38.0
WP_138070833.1\|945436_946855_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	4.6e-49	28.5
WP_164953268.1\|946857_947880_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	3.6e-56	39.2
WP_164953269.1\|947882_948449_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.6e-29	40.5

DBSCAN-SWA_3

1202658 : 1254958

Staphylococcus_phage(22.5%)

holin,terminase,integrase

attL 1194696:1194713|attR 1244503:1244520

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1194696:1194713	attL	NA	NA	NA	NA
WP_164954058.1\|1202658_1203363_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	1.6e-18	29.8
WP_164953387.1\|1203817_1204279_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_164953388.1\|1204396_1205470_-	DUF4352 domain-containing protein	NA	NA	NA	NA
WP_164953389.1\|1205482_1206556_-	endonuclease	A0A1S5SAB0	Streptococcus_phage	5.8e-89	47.3
WP_133454954.1\|1206574_1206916_-	helix-turn-helix transcriptional regulator	A8ATJ9	Listeria_phage	3.9e-15	52.7
WP_099482974.1\|1207069_1207321_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_164953390.1\|1207436_1207940_+	hypothetical protein	A0A290FZK9	Caldibacillus_phage	1.5e-07	25.6
WP_164953391.1\|1207950_1208511_+	helix-turn-helix domain-containing protein	H9A0L8	Staphylococcus_phage	1.8e-12	63.9
WP_164953392.1\|1208511_1208757_+	hypothetical protein	NA	NA	NA	NA
WP_164953393.1\|1208758_1208950_+	hypothetical protein	NA	NA	NA	NA
WP_164953394.1\|1208950_1209757_+	AP2 domain-containing protein	A0A2H4J5K3	uncultured_Caudovirales_phage	2.5e-68	51.5
WP_164953395.1\|1209719_1210496_+	Rha family transcriptional regulator	A0A2H4JCT2	uncultured_Caudovirales_phage	1.2e-91	70.9
WP_164953396.1\|1210492_1210684_+	hypothetical protein	NA	NA	NA	NA
WP_099482982.1\|1210885_1211827_+	hypothetical protein	S6C475	Thermus_phage	2.9e-76	50.7
WP_164953397.1\|1211832_1212663_+	recombination protein RecT	S6AVW6	Thermus_phage	7.0e-90	64.5
WP_164953398.1\|1212696_1213452_+	HNH endonuclease	A0A125RNK0	Pseudomonas_phage	1.9e-41	39.7
WP_164953399.1\|1213448_1214336_+	DnaD domain protein	A6M985	Geobacillus_virus	2.5e-45	43.8
WP_164953400.1\|1214313_1215099_+	ATP-binding protein	A0A2I6PDA0	Staphylococcus_phage	7.2e-36	36.2
WP_157891073.1\|1215216_1215393_+	hypothetical protein	NA	NA	NA	NA
WP_164953401.1\|1215389_1215566_+	hypothetical protein	NA	NA	NA	NA
WP_164953402.1\|1215537_1215714_+	hypothetical protein	NA	NA	NA	NA
WP_086042713.1\|1215710_1215905_+	hypothetical protein	NA	NA	NA	NA
WP_164953403.1\|1215950_1216472_+	hypothetical protein	A0A1B1INA7	uncultured_Mediterranean_phage	3.1e-11	43.8
WP_164953404.1\|1216464_1216971_+	single-stranded DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	5.4e-53	62.5
WP_164953405.1\|1216997_1217276_+	hypothetical protein	NA	NA	NA	NA
WP_164953406.1\|1217272_1217494_+	hypothetical protein	NA	NA	NA	NA
WP_164953407.1\|1217490_1217670_+	hypothetical protein	NA	NA	NA	NA
WP_164953408.1\|1217682_1218075_+	hypothetical protein	NA	NA	NA	NA
WP_164953409.1\|1218077_1218305_+	helix-turn-helix domain-containing protein	A0A0A7AR52	Bacillus_phage	4.0e-08	44.6
WP_164953410.1\|1218307_1219531_+	DUF3310 domain-containing protein	A0A1W6JPA2	Staphylococcus_phage	5.4e-14	44.7
WP_133453792.1\|1219527_1219797_+	hypothetical protein	NA	NA	NA	NA
WP_164953411.1\|1219808_1220051_+	hypothetical protein	NA	NA	NA	NA
WP_164953412.1\|1220034_1220418_+	hypothetical protein	A0A1S5SAN0	Streptococcus_phage	4.6e-12	37.8
WP_164953413.1\|1220414_1220612_+	hypothetical protein	NA	NA	NA	NA
WP_164953414.1\|1220711_1221143_+	hypothetical protein	NA	NA	NA	NA
WP_164953415.1\|1221422_1221620_+	hypothetical protein	NA	NA	NA	NA
WP_164953416.1\|1221767_1222157_+	hypothetical protein	NA	NA	NA	NA
WP_164953417.1\|1222160_1222331_+	hypothetical protein	NA	NA	NA	NA
WP_164953418.1\|1222323_1222839_+	hypothetical protein	NA	NA	NA	NA
WP_164953419.1\|1222887_1223373_+	Holliday junction resolvase RecU	H9A0M5	Staphylococcus_phage	1.2e-30	46.2
WP_164953420.1\|1223389_1223794_+	hypothetical protein	A0A290FZR5	Caldibacillus_phage	1.7e-12	36.4
WP_164953421.1\|1223860_1224718_+	hypothetical protein	NA	NA	NA	NA
WP_164953422.1\|1224985_1225312_+	hypothetical protein	NA	NA	NA	NA
WP_164953423.1\|1225442_1226147_+	hypothetical protein	A0A2P1JTW4	Anoxybacillus_phage	1.9e-27	36.0
WP_164953424.1\|1226143_1227436_+\|terminase	PBSX family phage terminase large subunit	A0A2P1JTW5	Anoxybacillus_phage	8.5e-127	60.2
WP_164953425.1\|1227448_1229068_+	hypothetical protein	A0A1U9WQP5	Geobacillus_phage	1.9e-131	47.4
WP_164953426.1\|1229072_1230161_+	hypothetical protein	A0A2H4J2F6	uncultured_Caudovirales_phage	8.6e-72	42.5
WP_164953427.1\|1230129_1230351_+	hypothetical protein	NA	NA	NA	NA
WP_086038803.1\|1230365_1230623_+	hypothetical protein	NA	NA	NA	NA
WP_086042678.1\|1230639_1230831_+	hypothetical protein	NA	NA	NA	NA
WP_164953428.1\|1231085_1231691_+	hypothetical protein	Q20DD5	Lactobacillus_phage	5.2e-18	35.3
WP_164953429.1\|1231703_1232078_+	hypothetical protein	NA	NA	NA	NA
WP_086042675.1\|1232104_1233109_+	hypothetical protein	A0A2H4J2G1	uncultured_Caudovirales_phage	1.1e-68	43.5
WP_164953430.1\|1233150_1233426_+	hypothetical protein	NA	NA	NA	NA
WP_164953431.1\|1233443_1233827_+	hypothetical protein	NA	NA	NA	NA
WP_164953432.1\|1233838_1234171_+	hypothetical protein	A0A218KCG8	Bacillus_phage	5.9e-08	35.0
WP_164953433.1\|1234160_1234643_+	HK97 gp10 family phage protein	A0A1U9WQQ7	Geobacillus_phage	2.3e-32	46.8
WP_164953434.1\|1234647_1235028_+	hypothetical protein	A0A2H4JAC9	uncultured_Caudovirales_phage	4.4e-15	39.0
WP_164953435.1\|1235091_1235670_+	hypothetical protein	M4ZS18	Bacillus_phage	3.0e-31	38.3
WP_164953436.1\|1235746_1236268_+	hypothetical protein	A0A218KCI2	Bacillus_phage	1.1e-08	34.6
WP_164953437.1\|1236222_1236606_+	hypothetical protein	NA	NA	NA	NA
WP_164953438.1\|1236645_1242306_+	LysM peptidoglycan-binding domain-containing protein	A0A1D6Z289	Staphylococcus_phage	6.2e-89	40.3
WP_164953439.1\|1242298_1242733_+	hypothetical protein	NA	NA	NA	NA
WP_164953440.1\|1242732_1244526_+	hypothetical protein	A0A1B2APX2	Phage_Wrath	6.4e-56	34.4
1244503:1244520	attR	NA	NA	NA	NA
WP_164953441.1\|1244536_1244803_+	hypothetical protein	NA	NA	NA	NA
WP_164953442.1\|1244804_1246706_+	hypothetical protein	A0A059T5B3	Staphylococcus_phage	2.6e-39	30.8
WP_164953443.1\|1246775_1247090_+	DUF3467 domain-containing protein	NA	NA	NA	NA
WP_164953444.1\|1247076_1247478_+	hypothetical protein	NA	NA	NA	NA
WP_101144241.1\|1247552_1247846_+	hypothetical protein	NA	NA	NA	NA
WP_164953445.1\|1247850_1248273_+	hypothetical protein	NA	NA	NA	NA
WP_164953446.1\|1248314_1248581_+\|holin	phage holin	A0A1D6Z272	Staphylococcus_phage	9.9e-06	40.8
WP_164953447.1\|1248583_1249573_+	LysM peptidoglycan-binding domain-containing protein	A0A2P1CFS5	Microbacterium_phage	2.0e-11	50.0
WP_164953448.1\|1249658_1249925_+	hypothetical protein	NA	NA	NA	NA
WP_164953449.1\|1250046_1250556_+	hypothetical protein	NA	NA	NA	NA
WP_164953450.1\|1250555_1250927_+	hypothetical protein	A0A240FHV6	Streptococcus_phage	2.6e-20	47.6
WP_164953451.1\|1250928_1251159_+	hypothetical protein	NA	NA	NA	NA
WP_164954059.1\|1251228_1252389_+	hypothetical protein	A0A220GFH1	Streptococcus_phage	2.3e-107	53.0
WP_164953452.1\|1252385_1253708_+	DUF3440 domain-containing protein	L0P6Z6	Lactobacillus_phage	1.3e-111	45.8
WP_164953453.1\|1253720_1254221_+	ParB N-terminal domain-containing protein	A0A220GKT8	Streptococcus_phage	1.8e-77	84.8
WP_133453194.1\|1254217_1254439_+	hypothetical protein	NA	NA	NA	NA
WP_164953454.1\|1254526_1254958_-	YolD-like family protein	A0A1Q1PW34	Staphylococcus_phage	1.0e-15	39.8

DBSCAN-SWA_4

1561874 : 1579853

uncultured_Mediterranean_phage(27.27%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164953616.1\|1561874_1563653_-\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	7.6e-17	26.0
WP_164953617.1\|1563656_1564919_-\|tRNA	histidine--tRNA ligase	A0A2I2L577	Orpheovirus	1.5e-19	25.1
WP_164953618.1\|1565215_1566061_-	SH3 domain-containing protein	A0A0N9SGH1	Paenibacillus_phage	2.3e-16	35.1
WP_164953619.1\|1566057_1566510_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_164953620.1\|1566518_1568711_-	RelA/SpoT family protein	A0A2I2L310	Orpheovirus	2.4e-12	39.1
WP_086042820.1\|1568815_1569337_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.1e-27	45.8
WP_164953621.1\|1569347_1571609_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	9.2e-68	30.3
WP_164953622.1\|1571636_1572752_-	amidohydrolase	NA	NA	NA	NA
WP_164953623.1\|1572744_1573860_-	dipeptide epimerase	Q6A202	Oenococcus_phage	2.3e-11	24.9
WP_138071617.1\|1574018_1576310_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.6e-27	31.4
WP_086042825.1\|1576373_1576652_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.0e-08	37.5
WP_164953624.1\|1576663_1577803_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	4.9e-86	44.4
WP_164953625.1\|1577814_1578837_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_164953626.1\|1578839_1579853_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	8.2e-08	24.7

DBSCAN-SWA_5

1754243 : 1761545

Staphylococcus_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164953702.1\|1754243_1754975_-	nicotinamide mononucleotide transporter	U5J9C5	Bacillus_phage	3.5e-29	36.5
WP_138071898.1\|1754986_1756081_-	AAA family ATPase	A0A2K9VDE3	Lactobacillus_phage	1.9e-66	37.7
WP_164953703.1\|1756376_1756934_-	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA
WP_138071902.1\|1757207_1758200_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	2.9e-106	60.1
WP_086043051.1\|1758240_1758705_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.8e-42	68.7
WP_138071904.1\|1758701_1759892_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	1.9e-128	58.8
WP_138071905.1\|1759891_1760515_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	6.9e-42	45.4
WP_164953704.1\|1760519_1761545_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	8.4e-61	37.8

DBSCAN-SWA_6

1803233 : 1820952

Staphylococcus_phage(72.73%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164953741.1\|1803233_1806764_-	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	8.5e-20	36.9
WP_164953742.1\|1806858_1807050_-	hypothetical protein	NA	NA	NA	NA
WP_138071981.1\|1807468_1808179_-	transaldolase	E3SKN5	Synechococcus_phage	9.4e-19	35.1
WP_086043104.1\|1808313_1808610_+	hypothetical protein	NA	NA	NA	NA
WP_158290723.1\|1808648_1808984_+	hypothetical protein	A0A2H4PQR0	Staphylococcus_phage	1.7e-07	43.0
WP_138071994.1\|1808980_1809313_+	hypothetical protein	NA	NA	NA	NA
WP_164954082.1\|1809419_1811570_+	bifunctional metallophosphatase/5'-nucleotidase	S4W4I8	Pandoravirus	8.3e-10	34.6
WP_158290724.1\|1811690_1812605_-	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	7.0e-51	46.1
WP_164952754.1\|1812822_1813050_+	hypothetical protein	NA	NA	NA	NA
WP_086043108.1\|1813091_1814282_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	9.8e-170	78.6
WP_138072000.1\|1814693_1816286_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	9.2e-216	69.9
WP_164953743.1\|1816333_1817095_-	prolyl oligopeptidase family serine peptidase	A0A2H4PQM6	Staphylococcus_phage	6.0e-56	50.0
WP_164953744.1\|1817081_1817549_-	nucleoside triphosphatase YtkD	NA	NA	NA	NA
WP_164953745.1\|1817587_1818346_+	hypothetical protein	NA	NA	NA	NA
WP_164953746.1\|1818355_1818583_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	2.4e-24	63.5
WP_164953747.1\|1818623_1819586_-	hypothetical protein	A0A2H4PQM0	Staphylococcus_phage	7.9e-37	34.5
WP_164953748.1\|1819569_1820952_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	4.4e-89	41.7

DBSCAN-SWA_7

2011590 : 2019529

Lactococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164953837.1\|2011590_2013192_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	5.7e-48	30.1
WP_138071413.1\|2013788_2015075_+\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	5.4e-41	30.0
WP_138071415.1\|2015067_2015826_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	6.0e-56	48.2
WP_164953838.1\|2016034_2018113_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	9.0e-203	54.1
WP_138072308.1\|2018087_2018450_-	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	2.1e-27	50.0
WP_138072310.1\|2018594_2018825_+	hypothetical protein	NA	NA	NA	NA
WP_157891104.1\|2018884_2019529_-	serine/threonine protein phosphatase	A8E2N0	Enterococcus_phage	1.2e-09	26.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047363

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection