CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP049608	Atlantibacter hermannii strain 78-1320 chromosome, complete genome	2 crisprs	DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	0	18	4	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP049608_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049608_1

1135749-1138218

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

40 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP049608_1

>merge|NZ_CP049608|1|1135749-1138218|CRISPRCasFinder,CRT,PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACACAGGGACATTGTCGTCAATCAGATCCAGCGGCGCGGTTTATCCCCACTGGCGCGGGGAACACTCAGCTACCCTATCTAAGCTTTGGCCCTTTGGCGGTTTATCCCCGCTGGCGCGGGGAACACCGCATCCAGGGTCTATCCCTAAAATCAACATACGGTTTATCCCCGCTGGCGCGGGGAACACATCAGCGGGCGCAAACTCCGGTGGGCGAACGGCGGTTTATCCCCGCTGGCGCGGGGAACACATAATTCTGTCATCGTCCTGAAGTGGGACATTCGGTTTATCCCCGCTGGCGCGGGGAACACTTTCGTTTGTTTAATTCCAGCGCCCGTTTCAACGGTTTATCCCCGCTGGCGCGGGAAACACTGGGATGCCACGGAATGTGGTCCAGAATTCGCCGGTTTATCCCCGCTGGCGCGGGGAACACTACTGGACGGCGTGAAGCACGCTGAATTGCGGCGGTTTATCCCCGCTGGCGCGGGGAACACCAGCGTGCCGGGAATTTTAACCCCCGCTGTTGCGGTTTATCCCCGCTGGCGCGGGGAACACTTCTGGTTGATTAGCTCCAGCGTTGACTGACACGGTTTATCCCCGCTGGCGCGGGGAACACTTCATTTTTCACCTCGTGCTGATTGTCGATAACGGTTTATCCCCGCTGGCGCGGGGAACACCCACATACTCATCAGAAAAGCCCCCCTGATCGCGGTTTATCCCCGCTGGCGCGGGGAACACTGGGCCGCCGGAGAGCGAACCGCACTGGACACCGGTTTATCCCCGCTGCCGCGGGGAACACTGAAGCCACAACCGACCGAATTTAGTACCCGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCAAATCAATTGCCGGGGAAAACATCTTCTATCCGGTTTATCCCCGCTGGCGCGGGGAACACGCCACCAGGCGATCCCGGGAGTTCCGTAATGGCGGTTTATCCCCGCTGGCGCGGGGAACACTGAGCGCATTAAGGACTGGAGCAACCCACCAGCGGTTTATCCCCGCTGGCGCGGGGAACACTACAAAGTGGAGCTGCTCTTACACATGTAAGCCGGTTTATCCCCGCTGGCGCGGGGAACACGATAGCTGTAATAACATTCGCGAATGAATCCGCGGTTTATCCCCGCTGGCGCGGGGAACACTTCACACTGACCCGGAAAAGGCCGTGCAGTGGCGGTTTATCCCCGCTGGCGCGGGGAACACGTCAGGTGTGACCAGTTCGACCCGTATTTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACATCGGACATTGGAACAACATGCTGACGGCGACCGGTTTATCCCCGCTGGCGCGGGGAACACCACCACCAGCAGGTCGCCATCGCTGATACCTGCGGTTTATCCCCGCTGGCGCGGGGAACACATTGGCAGGTCAGACGGTTCGATTTTGTCCCGCGGTTTATCCCCGCTGGCGCGGGGAACACCAGTTGTCAGTGAATGAAAAGTCGCTGAAGTTCGGTTTATCCCCGCTGGCGCGGGGAACACAATGCTGTCGGTAACAGCGGGATTTTCCCGCCCGGTTTATCCCCGCTGGCGCGGGGAACACGCGCCAACAAACTGGCGAAGCTCGAAGAATTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGAATCATTACGATAATCAATAATCATCTCACCGGTTTATCCCCGCTGGCGCGGGGAACACTATTGATGTGGATTGAAGATGAATGGTTCTATCGGTTTATCCCCGCTGGCGCGGGGAACACTAATCCACCAGCAAGGAAGTCAGTCAGTTGCACGGTTTATCCCCGCTGGCGCGGGGAACACTACTGCTCAACCACGGACGGGTCAATACCTTTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGTAATGACGGGAAAGTGAAGCGCAAAGGTGCGGTTTATCCCCGCTGGCGCGGGGAACACGTACAGGCATTGACCCTGCTGTCACGTATGCGTGGTTTATCCCCGCTGGCGCGGGGAACACGTAGAAATCGTCCAGTGTTTTGCGAATACCTACGGTTTATCCCCGCTGGCGCGGGGAACACTTGCGTGACGCCAAACTGTTTGACCAGTTCACCGGTTTATCCCCGCTGGCGCGGGGAACACGCGGGTACAGTGAAGTAACGGCAGGCGGTACGCGGTTTATCCCCGCTGGCGCGGGGAACACCGGCAAAAAACCAGGTTAACCGCGATAAACCGCGGTTTATCCCCGCTGGCGCGGGGAACACTGATACCTAAATTAAGTGGGCCCGCGGGCCCACGGTTTATCCCCGCTGGCGCGGGGAACACCTGTGAATGATCCGGATGTTACAGGGGTTTTACGGTTTATCCCCGCTGGCGCGGGGAACACGCTCTGCACAGTGAGAAAAGACCTCGCGGCGCTGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP049608|1|1|1135749-1138218|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGGACATTGTCGTCAATCAGATCCAGCGGCG
CGGTTTATCCCCACTGGCGCGGGGAACAC	TCAGCTACCCTATCTAAGCTTTGGCCCTTTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCATCCAGGGTCTATCCCTAAAATCAACATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCAGCGGGCGCAAACTCCGGTGGGCGAACGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAATTCTGTCATCGTCCTGAAGTGGGACATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTCGTTTGTTTAATTCCAGCGCCCGTTTCAA
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TGGGATGCCACGGAATGTGGTCCAGAATTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGGACGGCGTGAAGCACGCTGAATTGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCGTGCCGGGAATTTTAACCCCCGCTGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTGGTTGATTAGCTCCAGCGTTGACTGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATTTTTCACCTCGTGCTGATTGTCGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCACATACTCATCAGAAAAGCCCCCCTGATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGGCCGCCGGAGAGCGAACCGCACTGGACAC
CGGTTTATCCCCGCTGCCGCGGGGAACAC	TGAAGCCACAACCGACCGAATTTAGTACCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAATCAATTGCCGGGGAAAACATCTTCTATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCACCAGGCGATCCCGGGAGTTCCGTAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAGCGCATTAAGGACTGGAGCAACCCACCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACAAAGTGGAGCTGCTCTTACACATGTAAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAGCTGTAATAACATTCGCGAATGAATCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCACACTGACCCGGAAAAGGCCGTGCAGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCAGGTGTGACCAGTTCGACCCGTATTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGGACATTGGAACAACATGCTGACGGCGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACCACCAGCAGGTCGCCATCGCTGATACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTGGCAGGTCAGACGGTTCGATTTTGTCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGTTGTCAGTGAATGAAAAGTCGCTGAAGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATGCTGTCGGTAACAGCGGGATTTTCCCGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCCAACAAACTGGCGAAGCTCGAAGAATTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAATCATTACGATAATCAATAATCATCTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTGATGTGGATTGAAGATGAATGGTTCTAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATCCACCAGCAAGGAAGTCAGTCAGTTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGCTCAACCACGGACGGGTCAATACCTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGTAATGACGGGAAAGTGAAGCGCAAAGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTACAGGCATTGACCCTGCTGTCACGTATGCG
TGGTTTATCCCCGCTGGCGCGGGGAACAC	GTAGAAATCGTCCAGTGTTTTGCGAATACCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCGTGACGCCAAACTGTTTGACCAGTTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGGGTACAGTGAAGTAACGGCAGGCGGTACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGGCAAAAAACCAGGTTAACCGCGATAAACCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATACCTAAATTAAGTGGGCCCGCGGGCCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTGAATGATCCGGATGTTACAGGGGTTTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCTGCACAGTGAGAAAAGACCTCGCGGCGC
TGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP049608|1|1|1135749-1138218|CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGGACATTGTCGTCAATCAGATCCAGCGGCG
CGGTTTATCCCCACTGGCGCGGGGAACAC	TCAGCTACCCTATCTAAGCTTTGGCCCTTTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCATCCAGGGTCTATCCCTAAAATCAACATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCAGCGGGCGCAAACTCCGGTGGGCGAACGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAATTCTGTCATCGTCCTGAAGTGGGACATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTCGTTTGTTTAATTCCAGCGCCCGTTTCAA
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TGGGATGCCACGGAATGTGGTCCAGAATTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGGACGGCGTGAAGCACGCTGAATTGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCGTGCCGGGAATTTTAACCCCCGCTGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTGGTTGATTAGCTCCAGCGTTGACTGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATTTTTCACCTCGTGCTGATTGTCGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCACATACTCATCAGAAAAGCCCCCCTGATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGGCCGCCGGAGAGCGAACCGCACTGGACAC
CGGTTTATCCCCGCTGCCGCGGGGAACAC	TGAAGCCACAACCGACCGAATTTAGTACCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAATCAATTGCCGGGGAAAACATCTTCTATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCACCAGGCGATCCCGGGAGTTCCGTAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAGCGCATTAAGGACTGGAGCAACCCACCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACAAAGTGGAGCTGCTCTTACACATGTAAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAGCTGTAATAACATTCGCGAATGAATCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCACACTGACCCGGAAAAGGCCGTGCAGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCAGGTGTGACCAGTTCGACCCGTATTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGGACATTGGAACAACATGCTGACGGCGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACCACCAGCAGGTCGCCATCGCTGATACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTGGCAGGTCAGACGGTTCGATTTTGTCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGTTGTCAGTGAATGAAAAGTCGCTGAAGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATGCTGTCGGTAACAGCGGGATTTTCCCGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCCAACAAACTGGCGAAGCTCGAAGAATTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAATCATTACGATAATCAATAATCATCTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTGATGTGGATTGAAGATGAATGGTTCTAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATCCACCAGCAAGGAAGTCAGTCAGTTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGCTCAACCACGGACGGGTCAATACCTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGTAATGACGGGAAAGTGAAGCGCAAAGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTACAGGCATTGACCCTGCTGTCACGTATGCG
TGGTTTATCCCCGCTGGCGCGGGGAACAC	GTAGAAATCGTCCAGTGTTTTGCGAATACCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCGTGACGCCAAACTGTTTGACCAGTTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGGGTACAGTGAAGTAACGGCAGGCGGTACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGGCAAAAAACCAGGTTAACCGCGATAAACCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATACCTAAATTAAGTGGGCCCGCGGGCCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTGAATGATCCGGATGTTACAGGGGTTTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCTGCACAGTGAGAAAAGACCTCGCGGCGC
TGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP049608|1|1|1136237-1138218|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCGTGCCGGGAATTTTAACCCCCGCTGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTGGTTGATTAGCTCCAGCGTTGACTGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATTTTTCACCTCGTGCTGATTGTCGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCACATACTCATCAGAAAAGCCCCCCTGATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGGCCGCCGGAGAGCGAACCGCACTGGACAC
CGGTTTATCCCCGCTGCCGCGGGGAACAC	TGAAGCCACAACCGACCGAATTTAGTACCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAATCAATTGCCGGGGAAAACATCTTCTATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCACCAGGCGATCCCGGGAGTTCCGTAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAGCGCATTAAGGACTGGAGCAACCCACCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACAAAGTGGAGCTGCTCTTACACATGTAAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAGCTGTAATAACATTCGCGAATGAATCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCACACTGACCCGGAAAAGGCCGTGCAGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCAGGTGTGACCAGTTCGACCCGTATTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGGACATTGGAACAACATGCTGACGGCGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACCACCAGCAGGTCGCCATCGCTGATACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTGGCAGGTCAGACGGTTCGATTTTGTCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGTTGTCAGTGAATGAAAAGTCGCTGAAGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATGCTGTCGGTAACAGCGGGATTTTCCCGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCCAACAAACTGGCGAAGCTCGAAGAATTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAATCATTACGATAATCAATAATCATCTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTGATGTGGATTGAAGATGAATGGTTCTAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATCCACCAGCAAGGAAGTCAGTCAGTTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACTGCTCAACCACGGACGGGTCAATACCTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGTAATGACGGGAAAGTGAAGCGCAAAGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTACAGGCATTGACCCTGCTGTCACGTATGCG
TGGTTTATCCCCGCTGGCGCGGGGAACAC	GTAGAAATCGTCCAGTGTTTTGCGAATACCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCGTGACGCCAAACTGTTTGACCAGTTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGGGTACAGTGAAGTAACGGCAGGCGGTACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGGCAAAAAACCAGGTTAACCGCGATAAACCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATACCTAAATTAAGTGGGCCCGCGGGCCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTGAATGATCCGGATGTTACAGGGGTTTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCTGCACAGTGAGAAAAGACCTCGCGGCGC
TGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049608.1\|WP_043866676.1\|1149481_1150279_+\|conjugal-transfer-protein-TraB	unknown	unknown	gnl\|CDD\|226258
NZ_CP049608.1\|WP_002438813.1\|1135221_1135638_-\|Cu(I)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182320
NZ_CP049608.1\|WP_165431213.1\|1146882_1149384_+\|copper-exporting-P-type-ATPase-CopA	unknown	unknown	gnl\|CDD\|182635
NZ_CP049608.1\|WP_165431209.1\|1133811_1134726_+\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP049608.1\|WP_043865714.1\|1131385_1132015_+\|multifunctional-acyl-CoA-thioesterase-I/protease-I/lysophospholipase-L1	unknown	unknown	gnl\|CDD\|182521
NZ_CP049608.1\|WP_002438034.1\|1138302_1138596_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP049608.1\|WP_165431207.1\|1128317_1130735_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225669
NZ_CP049608.1\|WP_002438809.1\|1132043_1132814_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181198
NZ_CP049608.1\|WP_002438038.1\|1139566_1140166_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP049608.1\|WP_142984794.1\|1132871_1133726_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|225660
NZ_CP049608.1\|WP_165431205.1\|1125995_1127063_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP049608.1\|WP_002438039.1\|1140152_1140827_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_CP049608.1\|WP_165431212.1\|1143957_1146636_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP049608.1\|WP_002438812.1\|1134722_1135175_+\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|224501
NZ_CP049608.1\|WP_165431206.1\|1127191_1128331_+\|tRNA-2-selenouridine(34)-synthase-MnmH	unknown	unknown	gnl\|CDD\|236982
NZ_CP049608.1\|WP_165431208.1\|1130731_1131418_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182569
NZ_CP049608.1\|WP_165431210.1\|1140823_1141921_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP049608.1\|WP_002438036.1\|1138597_1139515_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP049608.1\|WP_165431211.1\|1142408_1143926_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP049608.1\|WP_002438042.1\|1141933_1142425_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801

Protein	Function_ID	Function_description	E-value
NZ_CP049608.1\|WP_043866676.1\|1149481_1150279_+\|conjugal-transfer-protein-TraB	gnl\|CDD\|226258	COG3735, COG3735, Uncharacterized protein conserved in bacteria [Function unknown].	1.25303e-80
NZ_CP049608.1\|WP_002438813.1\|1135221_1135638_-\|Cu(I)-responsive-transcriptional-regulator	gnl\|CDD\|182320	PRK10227, PRK10227, HTH-type transcriptional regulator CueR.	3.49022e-88
NZ_CP049608.1\|WP_165431213.1\|1146882_1149384_+\|copper-exporting-P-type-ATPase-CopA	gnl\|CDD\|182635	PRK10671, copA, copper-exporting P-type ATPase CopA.	0
NZ_CP049608.1\|WP_165431209.1\|1133811_1134726_+\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	7.18526e-75
NZ_CP049608.1\|WP_043865714.1\|1131385_1132015_+\|multifunctional-acyl-CoA-thioesterase-I/protease-I/lysophospholipase-L1	gnl\|CDD\|182521	PRK10528, PRK10528, multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional.	6.72827e-131
NZ_CP049608.1\|WP_002438034.1\|1138302_1138596_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.27933e-63
NZ_CP049608.1\|WP_165431207.1\|1128317_1130735_-\|ABC-transporter-permease	gnl\|CDD\|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP049608.1\|WP_002438809.1\|1132043_1132814_+\|SDR-family-oxidoreductase	gnl\|CDD\|181198	PRK08017, PRK08017, SDR family oxidoreductase.	0
NZ_CP049608.1\|WP_002438038.1\|1139566_1140166_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	6.07126e-54
NZ_CP049608.1\|WP_142984794.1\|1132871_1133726_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|225660	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones].	1.52127e-120
NZ_CP049608.1\|WP_165431205.1\|1125995_1127063_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	6.91866e-174
NZ_CP049608.1\|WP_002438039.1\|1140152_1140827_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	1.45935e-79
NZ_CP049608.1\|WP_165431212.1\|1143957_1146636_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NZ_CP049608.1\|WP_002438812.1\|1134722_1135175_+\|NfeD-family-protein	gnl\|CDD\|224501	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	3.50735e-37
NZ_CP049608.1\|WP_165431206.1\|1127191_1128331_+\|tRNA-2-selenouridine(34)-synthase-MnmH	gnl\|CDD\|236982	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional.	1.23962e-157
NZ_CP049608.1\|WP_165431208.1\|1130731_1131418_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|182569	PRK10584, PRK10584, putative ABC transporter ATP-binding protein YbbA; Provisional.	4.35777e-156
NZ_CP049608.1\|WP_165431210.1\|1140823_1141921_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	6.15956e-131
NZ_CP049608.1\|WP_002438036.1\|1138597_1139515_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.79502e-154
NZ_CP049608.1\|WP_165431211.1\|1142408_1143926_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP049608.1\|WP_002438042.1\|1141933_1142425_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	5.48393e-31

>NZ_CP049608.1|WP_002438813.1|1135221_1135638_-|Cu(I)-responsive-transcriptional-regulator
MNISDVAKKTGLTSKAIRFYEEKGLVTPPLRSENGYRSYTQSHLDELTLLRQARQVGFNLEECKELVHLFNDPDRRSADVKARTLQKVAEIERHIVELNDMRAQLLALAESCPGDDGADCPIMDNLSGCCHRRAKSGV
>NZ_CP049608.1|WP_002438812.1|1134722_1135175_+|NfeD-family-protein
MMAFFLMHPHTFWLSLGGLLLAAEMLGGSGYLLWSGVAAVVTGLLVWLFPFGWEWQGIGFAVLTVIAALLWTRWLARKPQPRADAALNQRGQQLIGQRFILDAPLVNGRGHMRVGDGTWPIVASEELPAGTRVEVIAVEGITLRVRPSPP
>NZ_CP049608.1|WP_165431209.1|1133811_1134726_+|SPFH/Band-7/PHB-domain-protein
MLIVIPVLIFVALVIVGAGVKIVPQGYQWTVERFGRYTRTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPKAAYEVSNLEHAIINLTMTNIRTVLGSMELDEMLSQRDSINTRLLHIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGVRQAEILKAEGDKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIAAGDIQAVNYFVAQKYTDALQQIGAANNSKVVLMPLDATSLMGSIAGISELIKESSERKRP
>NZ_CP049608.1|WP_142984794.1|1132871_1133726_+|tetratricopeptide-repeat-protein
MSLETIFDINETNLHQIIEQSMTTPVLFYFWSPRSQHCEQLTPMLEKLANQYRGQFILAKVDCDAEQRVAAQFGLRAIPTVYLFQQGQPVDGFQGPQPEEAVRALLDKVLPREEELKAQEAMALIEEGKHAEALPLLKEAWQLSNQNSEIGLLLAQTQIALQRSEDAEAVLKTIPMQDQDTRYQALVAQIDLLRQAADTPEIQQLQQQVAQHPDDAQLATQLALQLHQVGRNEEALELLWTHLKSDLGAGDGQVRKMLQEILAALGTGDQLASKYRRQLYSLLY
>NZ_CP049608.1|WP_002438809.1|1132043_1132814_+|SDR-family-oxidoreductase
MQKSVLITGCSSGIGLASAHELQRLGYRVLAACRKPADVEQMNALGFTGVLLDLDSPQSVEAAAAQVIALTNNRLYGLFNNGGYGVYGPLTSISRTQMEQQFSTNFFGAHQLTMLLLPAMLPHNEGRIVNTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRYSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVAKVRHAFESDKPKMRYPVTLVTWAVGLLKRLLPGRAMDKILQG
>NZ_CP049608.1|WP_043865714.1|1131385_1132015_+|multifunctional-acyl-CoA-thioesterase-I/protease-I/lysophospholipase-L1
MMNFNNVFRWHWPFLLLALLTFRAAAADTLLILGDSLSAGYRMSASAAWPALLNDKWQSRDVNVVNASISGDTAAQGLSRLPALLKQHQPRWVLVELGGNDGLRGFQPNAIASTLRQILTQVKAANAEPLIMQIRLPANYGRRYNEAFSAIYPDLAKEFDIPLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMETRLAPLVKHDS
>NZ_CP049608.1|WP_165431208.1|1130731_1131418_-|ABC-transporter-ATP-binding-protein
MPAENIIEIHHLKKSVGQGEHQLSILTGVELVVKPAQTIALIGESGSGKSTLLAILAGLDDGSSGEVHLLGQPLHSMDEEARARLRASQVGFVFQSFMLIPTLNALENVELPALLRGENDKTGREQAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPAVLFADEPTGNLDRHTGDRIADLLFSLNRDYATTLILVTHDEQLAARCDRRLRLREGQLVEEA
>NZ_CP049608.1|WP_165431207.1|1128317_1130735_-|ABC-transporter-permease
MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSARAVDPAWLAQAQKEGLRVSRQLSFATMTFAGDTPQLADVKAVDSLYPLYGELQTEPPGVKPEPGSVLLAPRLMALLSLKPGDTIDVGDATLTIAGTVVQEPDSGFNPFQMAPRLLMNLADVDKTGAVQPGSRITWRYKFAGQPQQLEQYEAWLLPQLKPEHRWTGMEQDEGALGKSLQRSQQFLLLSALLTLLLAVGAVAVAMGHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLMVLALSAITGGLVGMAFEHVLIRLLKPVLPAALPAASLWPWLWAVGAMGVISLLVGLRPYRLLLATQPLRVLRRDAVANVWPLKYYLPTIVIVVVTLLAWMMGGKMLLWAVLAGTVVMAALCALVGWVMLQVLKRLTLRQLPIRLAVNRLLRQPWATLSQLAAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIAPEQVREVKAFLAEHQIIPEAFYPIVRARLTQIRGEPTVSSQDESLNRELNLTWQDHRPDHNPITAGSWPPKVGEVSMEEELAKRLNVRLGDTLTFTGDTQDFSAKVTSLRHVDWESLRPNFFFIFPPGALDGQPQSWLTSFRANGETKMITQLNREFPTISLLDIGAILRQVGQVLSQVSRALEVMVVLVTACGILLLLAQVQVGMRQRHQELVVYRTLGAEKRLLRTTLWCEFAMLGLVSGLVAAIGAETALGFLQTRVFDFPWEPDWRLWVILPVCGALLLSACGGWLGVRLLKGKALFRQFTSQ
>NZ_CP049608.1|WP_165431206.1|1127191_1128331_+|tRNA-2-selenouridine(34)-synthase-MnmH
MEYVVTIRPNSRDWQTLLAQDIPVIDVRAPVEFAQGALPAAINLPLMNDTERAAVGTCYKQKGQQAALALGHLLVNHALREERLNAWRKACLRYPHGYLCCARGGLRSQIVQQWLSEAGIAYPRVEGGYKQLRQAAIQATETLSRLPMVLVGGFTGSGKTQLVNAQPLGVDLEGLAHHRGSSFGRTLSPQLSQASFENALAATLLRKHLTWHDHAHAFWVLEDEGQTIGANHLPQVVREQMSNAPIAVVEEPLARRLERLRNDYFIDMQREFCQAYGDASGWQAYREYLHHGLFAIRRRLGLERYATLAGRQCVACDQQQQRGDTDGHFAWLVPLLESYYDPMYRYQLEKKAAKVCFRGDYQSVADWLDAVRNGEITGW
>NZ_CP049608.1|WP_165431205.1|1125995_1127063_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPEAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLELPTAPWQLLASEAEWPVVFDKLGDLAIVKRRTGGYDGRGQWRLRAGDTAQLPQACYGDCIVEQGINFSGEVSLVGARGHNGETVFYPLTHNLHQDGILRTSVAFTHIHIEQQQQAEQMLSAIMHELGYVGVMAMECFVTPGGLLINELAPRVHNSGHWTQNGASISQFELHLRAILNLPLPQPVINGTSVMVNLIGTELNDAWLQLPLVHLHWYDKEVRPGRKVGHLNLTDTENGRLDASLEALVPLLPPEYASGIAWAQMKLR
>NZ_CP049608.1|WP_002438034.1|1138302_1138596_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRMAIWLLEVRAGVYVGDVSTRIREMIWQQITSLADEGNVVMAWATNTESGFEFQTWGKNRRVPVDFDGLRLVTFLPVNNQ
>NZ_CP049608.1|WP_002438036.1|1138597_1139515_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MSYVPLNPIPLKDRVSLIFLQYGHIDVIDGAFVLVDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEGGVRVYASGQPGGARADRLLYQAKLALDEDLRLKVVRRMFALRFGEEAPSRRSVEQLRGIEGGRVRATYTLLAKQYGVKWQGRKYDPKDWEKGDVINQCISAATSCLYGVTEAAVLAAGYAPAIGFIHTGKPLSFVYDIADIIKFDVVVPKAFEIARQNPSQPDKAVRLACRDIFRSSKTLMKLIPLIEDVLAAGEIAPPEPPPDAQPVAIPLPVSLGDAGHRSA
>NZ_CP049608.1|WP_002438038.1|1139566_1140166_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIQNAWCRDVYQFHQAIWQLFPSQPAQKRAFLFRIEAKHPGRGADVLLQSMEAPASSAAAQVLACKPLAFHLKEGDQLRFRLRANPIKTIKDEQQRLNGRGEIKRCRVPLLKEQEQHQWLIRKLSLAARLEHIESTSELPLFFSKNGTGGKIQPMNFEGILTVTSVPALLSLLNNGVGPAKAMGCGLLSLARP
>NZ_CP049608.1|WP_002438039.1|1140152_1140827_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKPYLILRLAGPMQAWGQPTFEGTRPTARFPTRSGLLGLLGACLGIQRDDRSALQALSESVRFAVRCDQSFIDGRTIPVTGLRDYHTVMDAREDYRGLKSHETIQTWREYLCDAVFTVAVWESEQATLRLPELKVAVCKPRFTPFLGRKSCPLTQPLFVDLCDAINPYQALANYAPAGGDIYSEAPPDGPCQTFTVRDEPIIALPRQFAAREWYVIKGASDVSQ
>NZ_CP049608.1|WP_165431210.1|1140823_1141921_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MNNFINFHVLISHSPSCLNRDDMNMQKDAVFGGKRRVRISSQSLKRAMRKSDYYARHIGASSLRTIHLEKLRDVLRQKLSPRFELPIIDKTLSLLSGKTIDDAEKINGDAVTPWVLGEVEWFCEQVMKAEAEQLDDKKLLKMLKDDIAAMRTNLQQGVDVALSGRMATSGLMSELGKVDGAMSIAHAITTHTVDSDIDWFTAVDDLQDLGSAHLGTQEFSSGVFYRYASLNIAQLQENLSGVSREQVLEIAAHLAHMLATEVPGAKQHTFAAFNPADMVMINFSDFPLSLANAFESPIKAKDGYLLPSINAFNEYWQRIAKGYGLTGPAAQFMLAEASMAGGNVVSVETLEQLKKWICHDGEASR
>NZ_CP049608.1|WP_002438042.1|1141933_1142425_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSTEIDAMALYNAWQQLDNGSSAQLRRVSEPDELREIPAFYRLVQPFGWENPANKRPLLRMVFCLSAGKDVIHHKEKIDDYPSGISLGRALAKSGKINERRVFQLVRAQSPGDMIQLRRLLIHAEPVLDWSLFARQLTWWGKRERQQLLEDFMLATPESNKKA
>NZ_CP049608.1|WP_165431211.1|1142408_1143926_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLLVDPWIPVRAFEERHPQTITLQRLCCSEEKWLLNLPRDDMELAALQLLICLLQVTCEPRDDSEMRLRVARPLSEEEFAALMSPWHQTFQLDHPQMPFMQVKGVEAKEPTPMEKLMTGLSGATNCAFVNQPGQGEALCGGCTAIALFNQANNAPGFGGGFKSGLRGGTPITTLIKGSDLRTTIWLNVLTTPRLQSSFPPDRLTENLPIWKRPISSGKTFPAATIGLLRGLFWQPAHIELCPPIGPGQCCGCGQQSNQRYDGFLKAKFNFTVEGLWPHPHSPRVLAEKKGVIEQKFLAFTTAAPSWTQIGRLLVDKETRQGEGRRVATVVEQFREVYPRFRLALIVGGYRNNQASILERRHDVLVFNDGWQNGSDVINDIVEMGLGYKTALRKGLYTFVEGAKNHDVKGAGVAVHEVAERHYYRRSELLIPAILASIDYSQPNDVIARLRKELHQLCEALFNQVTAPYAHHPKLIRSLAVARASLHKHLNELKPQGELAYVDGD
>NZ_CP049608.1|WP_165431212.1|1143957_1146636_-|CRISPR-associated-helicase/endonuclease-Cas3
MGKGIFSQYWGKTVREDSKEASCHLLIWHSLDVAAVASSWWDCSPSIRSFFCRKSPSLDEAKVKAWILFFIALHDIGKFDTRFQCKSVETWRTLFPEAVKLSSLDYDRCKGFDHGAGGLYWFIDDYQPMLEEPDFNAFYEPEPHPYYSWIPWIEAVTGHHGFIRSWHELDNDRLRWPSFLSPLLADFDKQARREWIAALEALFLLPAGLSVNAEPPEISPLLAGFCSIADWLGSWNSDDAFHFCAKPPATFDDLRDYFAARCKKDAVRVLKRSGLLAHVQEYQGVQTLLSAGHQPRQLQVLVDALPLEPGVTLIEAPTGAGKTEIALAYAWRLIDASLADSIVLALPTQATANAMFERMAFLAGCLFPQPNLILAHGNAKFNNDFQAIKQRGQNAQGNEEAWAQCCEWLALSNKRVFLGQIGVCTIDQVLISVLPVKYRFIRGLGIGRSVLIVDEIHAFDTYMNGLLDAVLKAQYKAGGSAILLSATLPEQQRHQLLNNYGRAVEANDNRSRAPYPLINWRGNNTARQWHLEDVPEHLPRRFALKLEPIKLADLMPDESLIDRMLNAARTGAQVCLICNLVDVAQKVCQQLQQKSGPDIDVTLFHSRFTLLDRQIKEGNVLRYFGKNGDRSRGRILVSTQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHERQSRPSGFTSPLTTVLLPDQANYGLHSKIYGNVRVLWRTQQHIEALKAQPLYFPDAYRAWLDAIYSADVADEPGWVTTAMDEFELQELSKRSKARQMLEWAGRAPLNDSDEKIYAVTRDGEMSLSIVPYLQTGQGKQLLDGRIIEHLDEFTVREALALNRINVPNSWRATLDDPLDEHGLLWLKGKTADGRWLHERKGGTFIYTKESGMTKVIPCEAL
>NZ_CP049608.1|WP_165431213.1|1146882_1149384_+|copper-exporting-P-type-ATPase-CopA
MSHTVNLTLDGLSCGHCVKRVKESLEKRPDVESAEVTITSAQVTGSASAEALIDTIKEAGYGAELSHPKADPLAESSIPSEALTAAPTSLPADSSFDDSQQLLIDGMSCASCVSRVQNALSGVPGVTQARVNLAERTALVMGSASASDLISAVEKAGYGAEAIEDDNERRERQQQTAQAAMKRFRWQSALALAVGIPVMIWGMFGDNMMVTDDNRSLWLGIGLVTLAVMIFAGGHFYRSAWKSLMNGTATMDTLVALGTGAAWLFSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALERLLDLTPPTARVVTEHGEQTLPLAEVQPGMTLRLTTGDRVPVDGEIIEGEAWLDEAMLTGEPIPQQKGAGETVHAGTVVQDGSVLFRASAVGNHTTLSRIIRMVRQAQSSKPEIGKLADRISAVFVPVVVLIALFSGAMWYFFGPAPQIVYTLVITTTVLIIACPCALGLATPMSIISGVGRAAEFGALVRDADALQRASTLDTVVFDKTGTLTEGKPQVVGVITAAGVDEQQAVRLAAALEQGSSHPLARAILDKAQEIAIPSVNGFRTLRGLGVSGEAEGHTLLLGNQALLHEQQVDTRELDAEIERQAQQGATPVLLAIDGKAAALLAIRDPLREDSRDALARLHREGYRLVMLTGDNAITAQAIAKEAGIDEVIAGVLPDGKAEAIAKLQREGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISKATLRNMKQNLLGAFVYNTLGIPIAAGILWPITGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKA
>NZ_CP049608.1|WP_043866676.1|1149481_1150279_+|conjugal-transfer-protein-TraB
MGLFDRLRALLGSLSPVNPWPAIDITLPGKRYLHLVGSIHMGTRDMSPLSARLVEKVRRADALIVEADIRSGGSPFGFDQAERPLSERLDAASLEQVEKIAGELSIPLSRLDTQPAWQVALMLQAHQAQSLGLRPEYGIDYQLLQAAQEHHTRVLELEGADNQIALLRQLPEQGLGLLQDTLTHWHTNARLLQLMIGWWLGNPPKEARVTLPNTFAHELYDVLMHQRNLAWCEFLNNLPPGRYVVAVGALHLYGEGNVPALLKRT

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Crispr_ID: NZ_CP049608_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049608_2

3207052-3207151

Orphan

Consensus_repeat	Method
TACCCGATGAACCATCCGATAGACCATCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049608_2

>merge|NZ_CP049608|2|3207052-3207151|CRISPRCasFinder
TACCCGATGAACCATCCGATAGACCATCCGACAAAGCCAAAGCCAGTAACGGCGCGGCTTTGAGGCTGGTACCCGATGAACCATCCGATAGACCACCCGA

>NZ_CP049608|2|2|3207052-3207151|CRISPRCasFinder
TACCCGATGAACCATCCGATAGACCATCCGA	CAAAGCCAAAGCCAGTAACGGCGCGGCTTTGAGGCTGG
TACCCGATGAACCATCCGATAGACCACCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049608.1\|WP_165431798.1\|3213006_3213582_+\|recombination-protein-NinG	unknown	unknown	gnl\|CDD\|368603
NZ_CP049608.1\|WP_165431785.1\|3202844_3203156_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049608.1\|WP_165430975.1\|3201814_3201952_-\|host-cell-division-inhibitory-peptide-Kil	unknown	unknown	gnl\|CDD\|310716
NZ_CP049608.1\|WP_165430976.1\|3201540_3201735_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049608.1\|WP_165431787.1\|3203819_3204197_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049608.1\|WP_165431791.1\|3208367_3208637_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049608.1\|WP_165430974.1\|3201944_3202217_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049608.1\|WP_165431796.1\|3212603_3212780_+\|NinE-family-protein	unknown	unknown	gnl\|CDD\|182029
NZ_CP049608.1\|WP_165431794.1\|3211408_3211840_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049608.1\|WP_165431795.1\|3211934_3212384_+\|DUF1367-family-protein	unknown	unknown	gnl\|CDD\|369209
NZ_CP049608.1\|WP_165431792.1\|3209225_3210134_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	unknown	unknown	gnl\|CDD\|238846
NZ_CP049608.1\|WP_165431790.1\|3205842_3206640_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|272946
NZ_CP049608.1\|WP_165431788.1\|3205211_3205409_+\|Cro/Cl-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|370262
NZ_CP049608.1\|WP_165431797.1\|3212772_3213003_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049608.1\|WP_165431793.1\|3210796_3211390_+\|DUF551-domain-containing-protein	unknown	unknown	gnl\|CDD\|367946
NZ_CP049608.1\|WP_165431789.1\|3205519_3205804_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP049608.1\|WP_165431786.1\|3203161_3203419_-\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP049608.1\|WP_072042663.1\|3210585_3210786_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049608.1\|WP_165432333.1\|3204353_3205103_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225484
NZ_CP049608.1\|WP_165432334.1\|3207523_3208225_+\|DNA-replication-protein	unknown	unknown	gnl\|CDD\|369163

Protein	Function_ID	Function_description	E-value
NZ_CP049608.1\|WP_165431798.1\|3213006_3213582_+\|recombination-protein-NinG	gnl\|CDD\|368603	pfam05766, NinG, Bacteriophage Lambda NinG protein. NinG or Rap is involved in recombination. Rap (recombination adept with plasmid) increases lambda-by-plasmid recombination catalyzed by Escherichia coli's RecBCD pathway.	9.48744e-75
NZ_CP049608.1\|WP_165431795.1\|3211934_3212384_+\|DUF1367-family-protein	gnl\|CDD\|369209	pfam07105, DUF1367, Protein of unknown function (DUF1367). This family consists of several highly conserved, hypothetical phage proteins of around 200 residues in length. The function of this family is unknown. Some proteins are annotated as IrsA (intracellular response to stress).	5.88653e-17
NZ_CP049608.1\|WP_165431792.1\|3209225_3210134_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	gnl\|CDD\|238846	cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly modified version of the P loop, the fingerprint peptide of mononucleotide-binding proteins, is present in the active site of the protein, which appears to be a positively charged cleft containing a number of conserved arginine and lysine residues. Although PAPS reductase has no ATPase activity, it shows a striking similarity to the structure of the ATP pyrophosphatase (ATP PPase) domain of GMP synthetase, indicating that both enzyme families have evolved from a common ancestral nucleotide-binding fold. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP) . It is also found in NodP nodulation protein P from Rhizobium meliloti which has ATP sulphurylase activity (sulphate adenylate transferase) .	3.79468e-17
NZ_CP049608.1\|WP_165431790.1\|3205842_3206640_+\|DNA-binding-protein	gnl\|CDD\|272946	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein. This model represents the most well-conserved core of a set of chromosomal and plasmid partition proteins related to ParB, including Spo0J, RepB, and SopB. Spo0J has been shown to bind a specific DNA sequence that, when introduced into a plasmid, can serve as partition site. Study of RepB, which has nicking-closing activity, suggests that it forms a transient protein-DNA covalent intermediate during the strand transfer reaction.	4.72541e-06
NZ_CP049608.1\|WP_165431788.1\|3205211_3205409_+\|Cro/Cl-family-transcriptional-regulator	gnl\|CDD\|370262	pfam09048, Cro, Cro. Members of this family are involved in the repression of transcription by binding as a homodimer to palindromic DNA operator sites in phage lambda: they repress genes expressed in early phage development and are necessary for the late stage of lytic growth. These proteins have a secondary structure consisting of three alpha-helices and three beta-sheets, and dimerize through interactions between the two antiparallel beta-strands.	1.44825e-23
NZ_CP049608.1\|WP_165431793.1\|3210796_3211390_+\|DUF551-domain-containing-protein	gnl\|CDD\|367946	pfam04448, DUF551, Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	4.78555e-14
NZ_CP049608.1\|WP_165431789.1\|3205519_3205804_+\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	3.23484e-25
NZ_CP049608.1\|WP_165432334.1\|3207523_3208225_+\|DNA-replication-protein	gnl\|CDD\|369163	pfam06992, Phage_lambda_P, Replication protein P. This family consists of several Bacteriophage lambda replication protein P like proteins. The bacteriophage lambda P protein promoters replication of the phage chromosome by recruiting a key component of the cellular replication machinery to the viral origin. Specifically, P protein delivers one or more molecules of Escherichia coli DnaB helicase to a nucleoprotein structure formed by the lambda O initiator at the lambda replication origin.	6.23244e-94
NZ_CP049608.1\|WP_165431796.1\|3212603_3212780_+\|NinE-family-protein	gnl\|CDD\|182029	PRK09689, PRK09689, prophage protein NinE; Provisional.	9.18883e-11
NZ_CP049608.1\|WP_165432333.1\|3204353_3205103_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	1.30452e-22
NZ_CP049608.1\|WP_165430975.1\|3201814_3201952_-\|host-cell-division-inhibitory-peptide-Kil	gnl\|CDD\|310716	pfam06301, Lambda_Kil, Bacteriophage lambda Kil protein. This family consists of several Bacteriophage lambda Kil protein like sequences from both phages and bacteria. Induction of a lambda prophage causes the death of the host cell even in the absence of phage replication and lytic functions due to expression of the lambda kil gene.	9.51932e-05

>NZ_CP049608.1|WP_165431790.1|3205842_3206640_+|DNA-binding-protein
MSSLSQLYKSKDKNGTETTVKKTFLVPLAEIYVEPGFNVREIDQVHVEEFRDAFIAGEYVPPLAVQVTEQGVKIIDGHHRYYGAKLATEAGHEIPRLECKDFVGTDADRIAFMVTSSQGKPLTPLERAAAYQRLINQGWEPAEIAKKVKRSVADVDHHLQLLACGDELIDMVRSGEVAATTAVALSREHGPQASTVAVEQMSKAKAAGKKKLTRSAALPQFSASKARQVLQLLADLEVPTSLPKAVEDILAEYREFLKQAGWEDA
>NZ_CP049608.1|WP_165431789.1|3205519_3205804_+|hypothetical-protein
MDDTTSRNKHSARHIESWLHSQIAMRGASNIAKALGVDKSQITRWKETLLPRMAMLLAVLEWGVVDDDMARLAREVAAILKNEKPQKSSNSFRA
>NZ_CP049608.1|WP_165431788.1|3205211_3205409_+|Cro/Cl-family-transcriptional-regulator
MNRMTLADYAKIHGQAKAANDFGVIQCAISKAIRAGRNIVVTVLPDGKVEAEEIRPFPSNKKSDT
>NZ_CP049608.1|WP_165432333.1|3204353_3205103_-|helix-turn-helix-domain-containing-protein
MEHKKNLTTEQLEDAARLKALYESKKKSLGITQYTIADDLGITQGAVGHYLNGRNALNVEMASGFAKILAVPISEFSPSIAAKVASQAESLDGDTLEYAGKLRDGIIPVVGDAVLGMDGLIDMVEFHAGWLRFYSSDPKAYAVRVRGDSMWPRMQSGEFVVIEPGTKVHPGDEVFVRTKDGHNMIKIMNMTRDGDYQFVSVNSEHKPITISVDDVDKIHFVSGIIKATRFISLEETHRVDMFGGPANLP
>NZ_CP049608.1|WP_165431787.1|3203819_3204197_-|hypothetical-protein
MSYSDIVSTIAMIVAFVAIPASSYLSYKSAVIGEKRKEWNAIAEKLLEHYERVLKEASKNQTYSTTVIPLEELEKIQRRMIKKDRDELTALVAQIILLRNSPPTEQRNSELKICAEKACELLKLK
>NZ_CP049608.1|WP_165431786.1|3203161_3203419_-|transcriptional-regulator
MTNREHKKLLRAIRHQQAMRDNQQFAKRIDRAFTRLSEDCSERVVKAVTGTLTLRNKPVVETGCCLPQVALFNAGHRKSENITAR
>NZ_CP049608.1|WP_165431785.1|3202844_3203156_-|hypothetical-protein
MTQYAIFELSMPNRGSWNGGWSGAMDKYVKHRQLPLKGNPNVKDGASHYYNFGDGWGANISVRIVDGAKAKNHAIKGSKGFCGYDWMIDSILKHGKIITEQVA
>NZ_CP049608.1|WP_165430974.1|3201944_3202217_-|hypothetical-protein
MEFDLKVKASGVDVSPSGYRDYIDVEVRGVDVTDMLSEIQGSVLYEEIELDDFIDWADGKGKASDILSRLDADEVIEWLRSNGHLEASND
>NZ_CP049608.1|WP_165430975.1|3201814_3201952_-|host-cell-division-inhibitory-peptide-Kil
MINRYLLEVAQGELAIAVCLGDGALWKRAMQKMKVAINSPWYRRF
>NZ_CP049608.1|WP_165430976.1|3201540_3201735_-|hypothetical-protein
MKYKFEHPRLTRTIPSMLASHRSLITEARESRKLGWRREAAYYLRCAAIERTCLTIAKGGRYPA
>NZ_CP049608.1|WP_165432334.1|3207523_3208225_+|DNA-replication-protein
MRNLVQAIQNRDGNALAKIAGDNSHLQDRGVNDGAERLVDLLFTNLKQLFPASVSTALKDPRDEAAAKRQWIAAFAENDIRTKEQLQAGMKHARASNSPFWPSPGQFIGWCKDADFKANGLPDASELHDMVMQYCAKKCQYDTPERYPWKSNACYWMVTKLYDHMRSFNLTESELRKRCAEELRKMARRIEAGESIPAPVVQIPKLHIPVSNEKGLDKIAEIRQRFKLRGGGS
>NZ_CP049608.1|WP_165431791.1|3208367_3208637_+|hypothetical-protein
MSSKAELIEYRRNRETGEERSVFVLSHSSRVSRTTLEQNLVMLKDRHGARAFVEIDDFPANLTEREAALKLANWLQRLSVAIEDHWTTP
>NZ_CP049608.1|WP_165431792.1|3209225_3210134_+|phosphoadenosine-phosphosulfate-reductase-family-protein
MNKEPMVVSFSGGQSSAFMCDFLLQNYADDFDMHFVFANTGREHPETLIFADKVDKLFGLNLVWLEGVTSIEHGVGMRHRVVSFETASRNGEPFEQFISVEGIPNVSRQKCSDYLKTQTIRSWMRAVGLARRGWSAKTAIGMRADEPERASMEKASTKRYNLVYPLCHWGDFDKQDVNDFWDAMPFKLNIPPHHGNCLTCFKKSDAKLYLIAHEHPEWFSWNRDMEEKYGMVKAVAGHTWWRRKRDTDQLITDANLEDRQRLIYLTNTNPDDGDGCTSSCEPFQSDYLTEDEFDDKIEGSAA
>NZ_CP049608.1|WP_072042663.1|3210585_3210786_+|hypothetical-protein
MADTTAEWSFSLDTQCPQCKHVFDLRQELVDNVSSIDICETDTVATRDYETACPECGHEFTCDFVY
>NZ_CP049608.1|WP_165431793.1|3210796_3211390_+|DUF551-domain-containing-protein
MTFTREQLIEHAKRRLNYSRCGCRVSDSDRALDEALMETALAALESRADADQHIRREVNAGGNTWVQCSNAAFEKAKSDGKHVRELYERPQPAPVVVHIPPEKPHTDGLLADGWNACRAAMLQGKAEPVSQPYTLRGWIPCSERMPAKGQEVLCTDQFENYETALYDTGYIPGPPFFATTAGEFHPTHWMPLPAPPL
>NZ_CP049608.1|WP_165431794.1|3211408_3211840_-|hypothetical-protein
MNASFFLTITTGVSVLVTGQILIKCILDPYISFKEHLGLVSALLLREQNKILNLSAKSEVVQEIKYVSALLQSKSHAVPLYGVFASLRLLPQYKNVREASRNLNLIASIIEGASNITPHSEYVQVHKSLTEIGKDLKVMVSYK
>NZ_CP049608.1|WP_165431795.1|3211934_3212384_+|DUF1367-family-protein
MQIDLVKHPGGVFSPASDSDLERLQRFKNGETYTAEIKLTRHPAHHRKAFAFFQFCFDHWSAEHSGYECSDEHTQKEEFRKNLTILAGFFDVVTTIRGETKVRAKSLAYSSMDGDEFARCYSALINAAIKHVFAGTTDPAILNRLQSFF
>NZ_CP049608.1|WP_165431796.1|3212603_3212780_+|NinE-family-protein
MTRRRSITLLAMENMIFRVTHRKKRKPELLPSQLPTFQYTAHLADIRWMRERARRKYG
>NZ_CP049608.1|WP_165431797.1|3212772_3213003_+|hypothetical-protein
MAKPKTRNKPYSERETQYIRRVAGKVPVALIAETLNRSPSAIKQWASANGVHLRVPHSVMVKHWIDYLPTHQSAME
>NZ_CP049608.1|WP_165431798.1|3213006_3213582_+|recombination-protein-NinG
MASGKKPPKPKKCKCCPERFIPRTSTQTVCSPKCAIQLARQLSERKKKHQEKIDRAAWNKRKDDVKPLKHWEDATQRVVNDYIRERDRELPCISCGTWTTVQWEAGHFRSRGAASHLRYDEDNIHKQCHRCNAELSSNAIPYRAGLVVKIGHERVEALENNNTPHRYTREELKSIRMHYRAKLRALKLEAA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	MN393079	Salmonella virus VSiA, complete genome	34355-34386	1	0.969
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	KC139518	Salmonella phage FSL SP-031, complete genome	11099-11130	1	0.969
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	MK479295	Salmonella phage SEE-1, complete genome	6970-7001	1	0.969
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	KC139559	Salmonella phage FSL SP-049 hypothetical protein, helicase, hypothetical proteins, DNA polymerase I, Mom, hypothetical protein, endonuclease, hypothetical proteins, putative HNH endonuclease, putative phage replicative helicase/primease, hypothetical proteins, lysozyme, hypothetical proteins, phage structural protein, head morphogenesis protein, and hypothetical protein genes, complete cds	11099-11130	1	0.969
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	MF158037	Salmonella phage St162, complete genome	9780-9811	1	0.969
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	MN855773	Siphoviridae sp. isolate 219, complete genome	5182-5213	1	0.969
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	MH424444	Salmonella virus VSiP, complete genome	34478-34509	1	0.969
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	MK214385	Salmonella phage TS6, complete genome	4063-4094	1	0.969
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	KC139652	Salmonella phage FSL SP-038 hypothetical proteins, tail length tape measure-related protein, hypothetical proteins, tail fiber protein, hypothetical protein, helicase, hypothetical proteins, DNA polymerase I, Mom, hypothetical protein, endonuclease, and hypothetical proteins genes, complete cds; and hypothetical protein gene, partial cds	19875-19906	1	0.969
NZ_CP049608_1	1.14\|1136571\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136571-1136602	32	MN070121	Salmonella phage Shemara, complete genome	35331-35362	2	0.938
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	247610-247641	2	0.938
NZ_CP049608_1	1.34\|1137792\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137792-1137823	32	MT559528	UNVERIFIED: Klebsiella phage vB_KpnP_cmc20193, complete genome	600-631	2	0.938
NZ_CP049608_1	1.34\|1137792\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137792-1137823	32	MG197810	Klebsiella phage 1611E-K2-1, complete genome	22134-22165	3	0.906
NZ_CP049608_1	1.34\|1137792\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137792-1137823	32	MN855889	Bacteriophage sp. isolate 370, complete genome	4202-4233	3	0.906
NZ_CP049608_1	1.5\|1136022\|32\|NZ_CP049608\|CRISPRCasFinder,CRT	1136022-1136053	32	NZ_CP022209	Burkholderia gladioli pv. gladioli strain FDAARGOS_188 plasmid unnamed1, complete sequence	177910-177941	7	0.781
NZ_CP049608_1	1.5\|1136022\|32\|NZ_CP049608\|CRISPRCasFinder,CRT	1136022-1136053	32	NZ_CP009321	Burkholderia gladioli strain ATCC 10248 plasmid 1, complete sequence	159066-159097	7	0.781
NZ_CP049608_1	1.5\|1136022\|32\|NZ_CP049608\|CRISPRCasFinder,CRT	1136022-1136053	32	NZ_CP022007	Burkholderia gladioli pv. gladioli strain KACC 11889 plasmid pls1, complete sequence	86438-86469	7	0.781
NZ_CP049608_1	1.13\|1136510\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136510-1136541	32	NC_022995	Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence	127119-127150	7	0.781
NZ_CP049608_1	1.17\|1136755\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136755-1136786	32	MN694377	Marine virus AFVG_250M826, complete genome	36233-36264	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NC_013356	Zymomonas mobilis subsp. mobilis NCIMB 11163 plasmid pZA1001, complete sequence	30877-30908	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP023678	Zymomonas mobilis subsp. mobilis strain ZM4 substr. 2032 plasmid pZM32, complete sequence	12778-12809	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NC_017183	Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB02, complete sequence	23117-23148	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NC_013788	Zymomonas mobilis subsp. mobilis ZM4 plasmid pZZM405, complete sequence	1500-1531	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP003711	Zymomonas mobilis subsp. mobilis NRRL B-12526 plasmid pZM1252602, complete sequence	25108-25139	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP003717	Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid pZM1402302, complete sequence	25105-25136	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NC_022903	Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed, complete sequence	6631-6662	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	CP036466	Zymomonas mobilis strain ER79ag plasmid pER79ag32, complete sequence	12778-12809	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	CP036462	Zymomonas mobilis strain ZM4* plasmid pZM32o, complete sequence	12780-12811	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	CP036458	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 strain ZM4 plasmid pER79ap32, complete sequence	12778-12809	7	0.781
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP021373	Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence	9420-9451	7	0.781
NZ_CP049608_1	1.28\|1137426\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137426-1137457	32	AJ972879	Yersinia phage phiR1-37 complete genome	176955-176986	7	0.781
NZ_CP049608_1	1.28\|1137426\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137426-1137457	32	NC_016163	Yersinia phage phiR1-37, complete genome	176955-176986	7	0.781
NZ_CP049608_1	1.1\|1135778\|32\|NZ_CP049608\|CRISPRCasFinder,CRT	1135778-1135809	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	430376-430407	8	0.75
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP053711	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence	18780-18811	8	0.75
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	434930-434961	8	0.75
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP014598	Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence	208148-208179	8	0.75
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	301675-301706	8	0.75
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	613678-613709	8	0.75
NZ_CP049608_1	1.27\|1137365\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137365-1137396	32	NC_019762	Microcoleus sp. PCC 7113 plasmid pMIC7113.07, complete sequence	2968-2999	8	0.75
NZ_CP049608_1	1.35\|1137853\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137853-1137884	32	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	18446-18477	8	0.75
NZ_CP049608_1	1.35\|1137853\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137853-1137884	32	MT478991	Escherichia phage vB_EcoM_011D4, complete genome	152276-152307	8	0.75
NZ_CP049608_1	1.35\|1137853\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137853-1137884	32	MK327941	Escherichia phage vB_EcoM_G37-3, complete genome	38287-38318	8	0.75
NZ_CP049608_1	1.35\|1137853\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137853-1137884	32	MF327006	Shigella phage Sf20, complete genome	137231-137262	8	0.75
NZ_CP049608_1	1.35\|1137853\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137853-1137884	32	MK327932	Escherichia phage vB_EcoM_G2248, complete genome	37403-37434	8	0.75
NZ_CP049608_1	1.35\|1137853\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137853-1137884	32	MK327947	Escherichia phage vB_EcoM_G5211, complete genome	39064-39095	8	0.75
NZ_CP049608_1	1.1\|1135778\|32\|NZ_CP049608\|CRISPRCasFinder,CRT	1135778-1135809	32	MN694362	Marine virus AFVG_250M129, complete genome	35163-35194	9	0.719
NZ_CP049608_1	1.3\|1135900\|32\|NZ_CP049608\|CRISPRCasFinder,CRT	1135900-1135931	32	NC_031077	Enterobacter phage Tyrion, complete genome	37347-37378	9	0.719
NZ_CP049608_1	1.11\|1136388\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136388-1136419	32	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	563940-563971	9	0.719
NZ_CP049608_1	1.11\|1136388\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136388-1136419	32	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	681072-681103	9	0.719
NZ_CP049608_1	1.11\|1136388\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136388-1136419	32	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	706265-706296	9	0.719
NZ_CP049608_1	1.11\|1136388\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136388-1136419	32	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	831992-832023	9	0.719
NZ_CP049608_1	1.20\|1136938\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1136938-1136969	32	NC_007961	Nitrobacter hamburgensis X14 plasmid 3, complete sequence	100120-100151	9	0.719
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP034811	Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence	27166-27197	9	0.719
NZ_CP049608_1	1.29\|1137487\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137487-1137518	32	MG945593	UNVERIFIED: Microviridae sp. isolate 4263-1602, complete genome	3218-3249	9	0.719
NZ_CP049608_1	1.31\|1137609\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137609-1137640	32	NC_049498	Arthrobacter phage Abba, complete genome	11685-11716	9	0.719
NZ_CP049608_1	1.35\|1137853\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137853-1137884	32	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	4162-4193	9	0.719
NZ_CP049608_1	1.35\|1137853\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137853-1137884	32	MK962753	Shigella phage JK32, complete genome	39088-39119	9	0.719
NZ_CP049608_1	1.39\|1138097\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1138097-1138128	32	NZ_CP032704	Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence	131395-131426	9	0.719
NZ_CP049608_1	1.4\|1135961\|32\|NZ_CP049608\|CRISPRCasFinder,CRT	1135961-1135992	32	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	165510-165541	10	0.688
NZ_CP049608_1	1.5\|1136022\|32\|NZ_CP049608\|CRISPRCasFinder,CRT	1136022-1136053	32	MN693676	Marine virus AFVG_250M32, complete genome	730-761	10	0.688
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	NZ_CP023524	Burkholderia gladioli pv. gladioli strain FDAARGOS_389 plasmid unnamed, complete sequence	130610-130641	10	0.688
NZ_CP049608_1	1.23\|1137121\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137121-1137152	32	MN694812	Marine virus AFVG_250M735, complete genome	9220-9251	10	0.688
NZ_CP049608_1	1.32\|1137670\|32\|NZ_CP049608\|CRISPRCasFinder,CRT,PILER-CR	1137670-1137701	32	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1910253-1910284	11	0.656

1. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MN393079 (Salmonella virus VSiA, complete genome) position: , mismatch: 1, identity: 0.969

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccgaccgaatttagtaaccgc	Protospacer
*************************** ****

2. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to KC139518 (Salmonella phage FSL SP-031, complete genome) position: , mismatch: 1, identity: 0.969

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccgaccgagtttagtacccgc	Protospacer
*******************.************

3. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MK479295 (Salmonella phage SEE-1, complete genome) position: , mismatch: 1, identity: 0.969

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccgaccgagtttagtacccgc	Protospacer
*******************.************

4. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to KC139559 (Salmonella phage FSL SP-049 hypothetical protein, helicase, hypothetical proteins, DNA polymerase I, Mom, hypothetical protein, endonuclease, hypothetical proteins, putative HNH endonuclease, putative phage replicative helicase/primease, hypothetical proteins, lysozyme, hypothetical proteins, phage structural protein, head morphogenesis protein, and hypothetical protein genes, complete cds) position: , mismatch: 1, identity: 0.969

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccgaccgagtttagtacccgc	Protospacer
*******************.************

5. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MF158037 (Salmonella phage St162, complete genome) position: , mismatch: 1, identity: 0.969

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccgaccgaatttagtaaccgc	Protospacer
*************************** ****

6. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MN855773 (Siphoviridae sp. isolate 219, complete genome) position: , mismatch: 1, identity: 0.969

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccgaccgagtttagtacccgc	Protospacer
*******************.************

7. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MH424444 (Salmonella virus VSiP, complete genome) position: , mismatch: 1, identity: 0.969

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccgaccgaatttagtaaccgc	Protospacer
*************************** ****

8. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MK214385 (Salmonella phage TS6, complete genome) position: , mismatch: 1, identity: 0.969

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccgaccgagtttagtacccgc	Protospacer
*******************.************

9. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to KC139652 (Salmonella phage FSL SP-038 hypothetical proteins, tail length tape measure-related protein, hypothetical proteins, tail fiber protein, hypothetical protein, helicase, hypothetical proteins, DNA polymerase I, Mom, hypothetical protein, endonuclease, and hypothetical proteins genes, complete cds; and hypothetical protein gene, partial cds) position: , mismatch: 1, identity: 0.969

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccgaccgagtttagtacccgc	Protospacer
*******************.************

10. spacer 1.14|1136571|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MN070121 (Salmonella phage Shemara, complete genome) position: , mismatch: 2, identity: 0.938

tgaagccacaaccgaccgaatttagtacccgc	CRISPR spacer
tgaagccacaaccaaccgagtttagtacccgc	Protospacer
*************.*****.************

11. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.938

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
caccaccagcaggtcgccgtcgctgatgcctg	Protospacer
******************.********.****

12. spacer 1.34|1137792|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MT559528 (UNVERIFIED: Klebsiella phage vB_KpnP_cmc20193, complete genome) position: , mismatch: 2, identity: 0.938

gtagaaatcgtccagtgttttgcgaataccta	CRISPR spacer
gtagaaatcgtccagtgttttgcggataccca	Protospacer
************************.*****.*

13. spacer 1.34|1137792|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MG197810 (Klebsiella phage 1611E-K2-1, complete genome) position: , mismatch: 3, identity: 0.906

gtagaaatcgtccagtgttttgcgaataccta	CRISPR spacer
gtagaaatcgtccagtgttttgcggatgccca	Protospacer
************************.**.**.*

14. spacer 1.34|1137792|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MN855889 (Bacteriophage sp. isolate 370, complete genome) position: , mismatch: 3, identity: 0.906

gtagaaatcgtccagtgttttgcgaataccta	CRISPR spacer
gtagaaatcgtccagtgttttgcggatgccca	Protospacer
************************.**.**.*

15. spacer 1.5|1136022|32|NZ_CP049608|CRISPRCasFinder,CRT matches to NZ_CP022209 (Burkholderia gladioli pv. gladioli strain FDAARGOS_188 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ataattctgtcatcgtcctgaagtgg-gacatt	CRISPR spacer
aatattctggcgtcgtcctgaagtggcaacac-	Protospacer
*  ****** *.************** .***.

16. spacer 1.5|1136022|32|NZ_CP049608|CRISPRCasFinder,CRT matches to NZ_CP009321 (Burkholderia gladioli strain ATCC 10248 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

ataattctgtcatcgtcctgaagtgg-gacatt	CRISPR spacer
aatattctggcgtcgtcctgaagtggcaacac-	Protospacer
*  ****** *.************** .***.

17. spacer 1.5|1136022|32|NZ_CP049608|CRISPRCasFinder,CRT matches to NZ_CP022007 (Burkholderia gladioli pv. gladioli strain KACC 11889 plasmid pls1, complete sequence) position: , mismatch: 7, identity: 0.781

ataattctgtcatcgtcctgaagtgg-gacatt	CRISPR spacer
aatattctggcgtcgtcctgaagtggcaacac-	Protospacer
*  ****** *.************** .***.

18. spacer 1.13|1136510|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NC_022995 (Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence) position: , mismatch: 7, identity: 0.781

tgggccgccggaga--gcgaaccgcactggacac	CRISPR spacer
--gcgcgacgaggacggcgaaccgcactggacac	Protospacer
  *  ** **..**  ******************

19. spacer 1.17|1136755|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MN694377 (Marine virus AFVG_250M826, complete genome) position: , mismatch: 7, identity: 0.781

tgagcgcattaaggactggagcaacccaccag	CRISPR spacer
tagcctgattaagaactggagcgacccaccag	Protospacer
*.. *  ******.********.*********

20. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NC_013356 (Zymomonas mobilis subsp. mobilis NCIMB 11163 plasmid pZA1001, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

21. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023678 (Zymomonas mobilis subsp. mobilis strain ZM4 substr. 2032 plasmid pZM32, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

22. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NC_017183 (Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB02, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

23. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NC_013788 (Zymomonas mobilis subsp. mobilis ZM4 plasmid pZZM405, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

24. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP003711 (Zymomonas mobilis subsp. mobilis NRRL B-12526 plasmid pZM1252602, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

25. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP003717 (Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid pZM1402302, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

26. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NC_022903 (Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

27. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to CP036466 (Zymomonas mobilis strain ER79ag plasmid pER79ag32, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

28. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to CP036462 (Zymomonas mobilis strain ZM4* plasmid pZM32o, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

29. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to CP036458 (Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 strain ZM4 plasmid pER79ap32, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gacatccagcgggtcgctatcgctgatacgtt	Protospacer
 **  *****.******.*********** *

30. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 7, identity: 0.781

caccaccagcaggtcgccatcgctgatacctg-	CRISPR spacer
caccaccggcaggtcgccttcgccgg-gcatgt	Protospacer
*******.********** ****.*. .* **

31. spacer 1.28|1137426|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to AJ972879 (Yersinia phage phiR1-37 complete genome) position: , mismatch: 7, identity: 0.781

tgaatcattacgataatcaataatcatctcac	CRISPR spacer
tgaatcattacgataatccaaaatattccaat	Protospacer
****************** * ***  **. *.

32. spacer 1.28|1137426|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NC_016163 (Yersinia phage phiR1-37, complete genome) position: , mismatch: 7, identity: 0.781

tgaatcattacgataatcaataatcatctcac	CRISPR spacer
tgaatcattacgataatccaaaatattccaat	Protospacer
****************** * ***  **. *.

33. spacer 1.1|1135778|32|NZ_CP049608|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 8, identity: 0.75

agggacattgtcgtcaatcagatccagcggcg	CRISPR spacer
gcggcggtggtcgtcgaccagatccagcggcg	Protospacer
. **  .* ******.*.**************

34. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053711 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
catcaccagcaggtcggcatcgctggagacga	Protospacer
**.************* ********. . * .

35. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gatcaccaccagatcgccatcgctgaggccgc	Protospacer
 *.***** ***.************* .**

36. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014598 (Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
caccagcaacaggtcgccatcgcaattctcgg	Protospacer
***** **.************** . * .* *

37. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.75

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
cacgaccagcgggtcgccatcgccggagactt	Protospacer
*** ******.************.*. . **

38. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 8, identity: 0.75

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gatcaccaccagatcgccatcgctgaggccgc	Protospacer
 *.***** ***.************* .**

39. spacer 1.27|1137365|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NC_019762 (Microcoleus sp. PCC 7113 plasmid pMIC7113.07, complete sequence) position: , mismatch: 8, identity: 0.75

gcgccaacaaactggcgaagctcgaag--aattg	CRISPR spacer
tactcaaaaaactggagaagctcgaaggcaat--	Protospacer
   .*** ******* ***********  ***

40. spacer 1.35|1137853|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 8, identity: 0.75

ttgcgtgacgccaaactgtttgaccagttcac	CRISPR spacer
tggactcacgccgaactgtttggccagttcgg	Protospacer
* *  * *****.*********.*******.

41. spacer 1.35|1137853|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MT478991 (Escherichia phage vB_EcoM_011D4, complete genome) position: , mismatch: 8, identity: 0.75

ttgcgtgacgccaaactgtttgaccagttcac	CRISPR spacer
cggcaggtcgccaaacagtttaaccagttcag	Protospacer
. **. * ******** ****.*********

42. spacer 1.35|1137853|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MK327941 (Escherichia phage vB_EcoM_G37-3, complete genome) position: , mismatch: 8, identity: 0.75

ttgcgtgacgccaaactgtttgaccagttcac	CRISPR spacer
cggcaggtcgccaaacagtttaaccagttcag	Protospacer
. **. * ******** ****.*********

43. spacer 1.35|1137853|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MF327006 (Shigella phage Sf20, complete genome) position: , mismatch: 8, identity: 0.75

ttgcgtgacgccaaactgtttgaccagttcac	CRISPR spacer
cggcaggtcgccaaacagtttaaccagttcag	Protospacer
. **. * ******** ****.*********

44. spacer 1.35|1137853|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MK327932 (Escherichia phage vB_EcoM_G2248, complete genome) position: , mismatch: 8, identity: 0.75

ttgcgtgacgccaaactgtttgaccagttcac	CRISPR spacer
cggcaggtcgccaaacagtttaaccagttcag	Protospacer
. **. * ******** ****.*********

45. spacer 1.35|1137853|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MK327947 (Escherichia phage vB_EcoM_G5211, complete genome) position: , mismatch: 8, identity: 0.75

ttgcgtgacgccaaactgtttgaccagttcac	CRISPR spacer
cggcaggtcgccaaacagtttaaccagttcag	Protospacer
. **. * ******** ****.*********

46. spacer 1.1|1135778|32|NZ_CP049608|CRISPRCasFinder,CRT matches to MN694362 (Marine virus AFVG_250M129, complete genome) position: , mismatch: 9, identity: 0.719

agggacattgtcgtcaatcagatccagcggcg	CRISPR spacer
agggatattctcgtcaatcagattacacaaag	Protospacer
*****.*** *************.  .*.. *

47. spacer 1.3|1135900|32|NZ_CP049608|CRISPRCasFinder,CRT matches to NC_031077 (Enterobacter phage Tyrion, complete genome) position: , mismatch: 9, identity: 0.719

cgcatccagggtctatccctaaaatcaacata	CRISPR spacer
tgcatcccgggtcaatccctaaaactgccgtc	Protospacer
.****** ***** **********... *.*

48. spacer 1.11|1136388|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 9, identity: 0.719

ttcatttttcacctcgtgctgattgtcgataa	CRISPR spacer
atcgaacttcgcctcgagctgattgtcgatct	Protospacer
 **.  .***.***** *************

49. spacer 1.11|1136388|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 9, identity: 0.719

ttcatttttcacctcgtgctgattgtcgataa	CRISPR spacer
atcgaatttcgcctcgagctgattgtcgacct	Protospacer
 **.  ****.***** ************.

50. spacer 1.11|1136388|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcatttttcacctcgtgctgattgtcgataa	CRISPR spacer
atcgaatttcgcctcgagctgattgtcgacct	Protospacer
 **.  ****.***** ************.

51. spacer 1.11|1136388|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 9, identity: 0.719

ttcatttttcacctcgtgctgattgtcgataa	CRISPR spacer
atcgaatttcgcctcgagctgattgtcgacct	Protospacer
 **.  ****.***** ************.

52. spacer 1.20|1136938|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NC_007961 (Nitrobacter hamburgensis X14 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.719

ttcacactgacccggaaaaggccgtgcagtgg	CRISPR spacer
gagtctctgacccggaaaagcgcgtgcaggag	Protospacer
    * **************  ******* .*

53. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034811 (Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
caccaccagcaggtcgcgatggcccagcagtt	Protospacer
***************** ** **. *    *

54. spacer 1.29|1137487|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MG945593 (UNVERIFIED: Microviridae sp. isolate 4263-1602, complete genome) position: , mismatch: 9, identity: 0.719

tattgatgtggattgaagatgaatggttctat	CRISPR spacer
cacgtggttggattgaatatgcatggttctat	Protospacer
.*.  .  ********* *** **********

55. spacer 1.31|1137609|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NC_049498 (Arthrobacter phage Abba, complete genome) position: , mismatch: 9, identity: 0.719

tactgctcaaccacggacgggtcaataccttt	CRISPR spacer
acctgctcaacgacgcacgggtcaacggcatc	Protospacer
  ********* *** *********.. * *.

56. spacer 1.35|1137853|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 9, identity: 0.719

ttgcgtgacgccaaactgtttgaccagttcac	CRISPR spacer
ccggctcacgccaaactgttcgcccagttcca	Protospacer
..*  * *************.* *******

57. spacer 1.35|1137853|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MK962753 (Shigella phage JK32, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtgacgccaaactgtttgaccagttcac	CRISPR spacer
cggcagatcgccaaacagtttaaccagttcag	Protospacer
. **. . ******** ****.*********

58. spacer 1.39|1138097|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032704 (Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ctgtgaatgatccggatgttacaggggtttta	CRISPR spacer
ccggcccggatccgcatgatacaggggttttg	Protospacer
*.*     ****** *** ************.

59. spacer 1.4|1135961|32|NZ_CP049608|CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 10, identity: 0.688

atcagcgggcgcaaactccggtgggcgaacgg	CRISPR spacer
tcgagcgggcgctaacaccggtgggcggtttc	Protospacer
 . ********* *** **********. .

60. spacer 1.5|1136022|32|NZ_CP049608|CRISPRCasFinder,CRT matches to MN693676 (Marine virus AFVG_250M32, complete genome) position: , mismatch: 10, identity: 0.688

ataattctgtcatcgtcctgaagtgggacatt	CRISPR spacer
ataattctgtcatcatcgtgaagtcaagagag	Protospacer
**************.** ****** ... .

61. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023524 (Burkholderia gladioli pv. gladioli strain FDAARGOS_389 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
gtccacctgcaggtcggcatcgctgcaggcga	Protospacer
  ***** ******** ********  . * .

62. spacer 1.23|1137121|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to MN694812 (Marine virus AFVG_250M735, complete genome) position: , mismatch: 10, identity: 0.688

caccaccagcaggtcgccatcgctgatacctg	CRISPR spacer
cttgaccagcaggccgccatggctgatgaaca	Protospacer
* . *********.****** ******.  ..

63. spacer 1.32|1137670|32|NZ_CP049608|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 11, identity: 0.656

gggtaatgacgggaaagtgaagcgcaaaggtg	CRISPR spacer
tacccatgacgggaatgagaagcgcaaacagc	Protospacer
 . . ********** * ********** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

21039 : 32038

Escherichia_phage(62.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165432259.1\|21039_21504_+	RidA family protein	M1I5B0	Acanthocystis_turfacea_Chlorella_virus	2.7e-27	42.4
WP_165430720.1\|21583_22867_+	MFS transporter	NA	NA	NA	NA
WP_165430721.1\|22905_23664_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_165430722.1\|24013_26446_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	0.0e+00	81.8
WP_165432260.1\|26459_27086_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.7e-120	92.3
WP_165430723.1\|27078_27855_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	1.2e-91	71.7
WP_165430724.1\|27911_28505_+	molecular chaperone	A0A077SLS7	Escherichia_phage	7.0e-68	63.3
WP_165430725.1\|28504_29044_+	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	1.4e-43	51.4
WP_165432261.1\|29280_30759_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	2.4e-194	72.1
WP_165430726.1\|30916_32038_+	Fic family protein	A0A1V0E025	Clostridioides_phage	6.9e-08	27.1

DBSCAN-SWA_2

568562 : 615477

Edwardsiella_phage(15.52%)

integrase,head,terminase

attL 568901:568919|attR 615517:615535

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002434963.1\|568562_568748_+	hypothetical protein	A0A0R6PI59	Moraxella_phage	9.9e-05	44.2
568901:568919	attL	NA	NA	NA	NA
WP_165430921.1\|569054_569375_-	hypothetical protein	K7PGV5	Enterobacterial_phage	6.7e-25	52.8
WP_165430922.1\|569377_569620_-	DNA polymerase V	I6PD82	Cronobacter_phage	6.6e-17	55.1
WP_165430923.1\|569792_569948_-	hypothetical protein	A0A077KCA4	Edwardsiella_phage	3.7e-05	53.8
WP_165430924.1\|569962_570358_-	hypothetical protein	NA	NA	NA	NA
WP_165430925.1\|570357_571419_-	hypothetical protein	H9C0Y2	Aeromonas_phage	2.3e-21	45.3
WP_165430926.1\|571408_572083_-	DUF2612 domain-containing protein	A0A077K9U8	Edwardsiella_phage	7.5e-42	45.3
WP_165430927.1\|572079_573315_-	hypothetical protein	A0A077KGW9	Edwardsiella_phage	3.9e-113	52.3
WP_165430928.1\|573323_573683_-	hypothetical protein	A0A077KCA1	Edwardsiella_phage	6.6e-21	46.4
WP_165430929.1\|573684_573969_-	hypothetical protein	NA	NA	NA	NA
WP_165430930.1\|573965_575426_-	hypothetical protein	A0A0E3M0V5	Enterobacteria_phage	9.6e-34	32.8
WP_165430931.1\|575653_576703_-	hypothetical protein	I6S627	Salmonella_phage	1.4e-98	77.2
WP_165430932.1\|576695_576866_-	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	6.9e-21	92.9
WP_165430933.1\|577345_577657_-	hypothetical protein	NA	NA	NA	NA
WP_165430934.1\|577656_578370_-	oxidoreductase	A0A077KAY0	Edwardsiella_phage	1.5e-37	39.7
WP_165430935.1\|578338_579223_-	hypothetical protein	A0A1V0DZ87	Acinetobacter_phage	7.1e-08	21.1
WP_165430936.1\|579219_579531_-	hypothetical protein	A0A077K9U4	Edwardsiella_phage	4.0e-22	45.5
WP_165430937.1\|579530_580340_-	hypothetical protein	NA	NA	NA	NA
WP_165430938.1\|580341_582201_-	hypothetical protein	A0A2R3UAN6	Myoviridae_environmental_samples	1.3e-54	30.4
WP_165430939.1\|582412_582817_-	hypothetical protein	A0A068CGG2	Acinetobacter_phage	3.0e-06	32.3
WP_165432276.1\|582825_583167_-	hypothetical protein	NA	NA	NA	NA
WP_165430940.1\|583269_584748_-	DUF3383 domain-containing protein	K4I0J7	Acinetobacter_phage	1.9e-69	33.7
WP_165432277.1\|584748_585240_-	hypothetical protein	A0A077KC88	Edwardsiella_phage	1.0e-16	32.9
WP_165430941.1\|585296_585665_-	hypothetical protein	A0A077KAW7	Edwardsiella_phage	7.5e-28	46.3
WP_165430942.1\|585661_586117_-	hypothetical protein	A0A077KC03	Edwardsiella_phage	3.9e-26	45.5
WP_165430943.1\|586119_586563_-	DUF4054 domain-containing protein	Q2NPC6	Xanthomonas_phage	2.9e-18	46.6
WP_165430944.1\|586562_586889_-	hypothetical protein	A0A1X9SFA9	Acinetobacter_phage	4.3e-11	40.0
WP_165430945.1\|586892_587927_-	DUF2184 domain-containing protein	Q6UJ19	Burkholderia_virus	3.9e-82	48.0
WP_165430946.1\|587926_588406_-	hypothetical protein	A0A219YBF2	Aeromonas_phage	2.8e-35	51.9
WP_165430947.1\|588407_589727_-	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	1.1e-68	41.8
WP_165432278.1\|590446_591136_-\|head	phage head morphogenesis protein	H9C0V1	Aeromonas_phage	1.2e-63	54.0
WP_165430948.1\|591188_592706_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	2.8e-105	44.8
WP_165430949.1\|592706_594383_-\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	6.3e-247	74.4
WP_165430950.1\|594387_594897_-\|terminase	terminase small subunit	G0ZND3	Cronobacter_phage	2.5e-29	45.3
WP_165430951.1\|595140_595353_-	hypothetical protein	NA	NA	NA	NA
WP_165432279.1\|595352_595547_-	hypothetical protein	A0A0S1S1I7	Klebsiella_phage	3.1e-09	64.3
WP_165430952.1\|595897_596170_-	hypothetical protein	G8C7W1	Escherichia_phage	2.3e-10	50.0
WP_165430953.1\|596156_596387_-	hypothetical protein	M4Q0Z5	Dunaliella_viridis_virus	1.3e-09	42.2
WP_165430954.1\|596383_596854_-	glycoside hydrolase family protein	H9C148	Vibrio_phage	1.3e-29	47.7
WP_165432280.1\|596828_597056_-	hypothetical protein	NA	NA	NA	NA
WP_165430955.1\|597483_597714_+	hypothetical protein	NA	NA	NA	NA
WP_165430956.1\|598122_598746_-	antitermination protein	K7P6X1	Enterobacteria_phage	7.8e-102	86.0
WP_165430957.1\|598742_598895_-	hypothetical protein	NA	NA	NA	NA
WP_165430958.1\|598980_599142_-	hypothetical protein	NA	NA	NA	NA
WP_165430959.1\|599138_599330_-	protein ninH	A0A1R3Y5V4	Salmonella_virus	4.4e-08	57.1
WP_165430960.1\|599326_599938_-	recombination protein NinG	G0ZNC4	Cronobacter_phage	2.3e-82	78.8
WP_165430961.1\|599909_600137_-	hypothetical protein	C6ZR59	Salmonella_phage	6.0e-12	55.2
WP_165430962.1\|600111_600273_-	NinE family protein	NA	NA	NA	NA
WP_165430963.1\|600313_600763_-	DUF1367 family protein	A0A096XEN2	Escherichia_phage	1.2e-48	60.4
WP_165430964.1\|600789_600987_-	hypothetical protein	NA	NA	NA	NA
WP_165432281.1\|600983_601343_-	hypothetical protein	A0A192Y6F5	Salmonella_phage	1.2e-25	68.8
WP_165430965.1\|601735_602212_-	hypothetical protein	D2K0B2	Staphylococcus_phage	1.9e-71	79.9
WP_165430966.1\|602171_602645_-	phosphoadenosine phosphosulfate reductase family protein	A0A140XFY9	Salmonella_phage	5.6e-68	82.3
WP_165430704.1\|602641_603265_-	hypothetical protein	G9L6B1	Escherichia_phage	2.2e-11	34.9
WP_165430967.1\|603364_603658_-	hypothetical protein	A0A2H4N7F8	Pectobacterium_phage	3.0e-19	47.4
WP_165430968.1\|603654_605031_-	AAA family ATPase	A0A1V0E5J4	Salmonella_phage	9.5e-209	81.0
WP_165430969.1\|605027_605861_-	replication protein	A0A1R3Y5R9	Salmonella_virus	2.2e-120	80.4
WP_165430970.1\|605853_606000_-	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	9.2e-14	75.0
WP_165430971.1\|605996_606794_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	7.4e-105	73.2
WP_165430972.1\|606832_607117_-	hypothetical protein	K7P7A2	Enterobacteria_phage	8.3e-19	52.1
WP_165432282.1\|607251_607494_-	transcriptional regulator	A0A0P0ZDD7	Stx2-converting_phage	6.9e-14	56.2
WP_165432283.1\|607641_608361_+	hypothetical protein	W6MVG5	Pseudomonas_phage	3.0e-49	46.4
WP_165430973.1\|609003_609141_+	hypothetical protein	NA	NA	NA	NA
WP_165430974.1\|609975_610248_+	hypothetical protein	NA	NA	NA	NA
WP_165430975.1\|610240_610378_+	host cell division inhibitory peptide Kil	NA	NA	NA	NA
WP_165430976.1\|610457_610652_+	hypothetical protein	NA	NA	NA	NA
WP_165430977.1\|610648_610807_+	hypothetical protein	NA	NA	NA	NA
WP_165430978.1\|610803_611505_+	recombinase	Q76H40	Enterobacteria_phage	1.3e-89	67.7
WP_165430979.1\|611505_611985_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.1e-52	81.5
WP_165430980.1\|612009_612306_+	hypothetical protein	NA	NA	NA	NA
WP_165430981.1\|612316_612859_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	2.5e-56	61.2
WP_165430982.1\|612855_613080_+	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	9.2e-13	55.7
WP_165430983.1\|613275_613515_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.5e-18	58.4
WP_165430984.1\|613511_613760_+	hypothetical protein	G8C7S3	Escherichia_phage	5.2e-25	74.4
WP_165430985.1\|613908_614154_+	excisionase family protein	S4TND0	Salmonella_phage	1.0e-28	71.2
WP_165430986.1\|614199_615477_+\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	1.4e-174	66.8
615517:615535	attR	NA	NA	NA	NA

DBSCAN-SWA_3

708335 : 757378

Escherichia_phage(26.67%)

integrase,lysis,holin,tail,coat,terminase

attL 707891:707906|attR 757593:757608

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
707891:707906	attL	NA	NA	NA	NA
WP_165431046.1\|708335_709943_+	hypothetical protein	A0A1S5SA14	Streptococcus_phage	1.3e-92	48.3
WP_165431047.1\|710380_712522_-	hypothetical protein	K7P7B1	Enterobacteria_phage	8.8e-36	55.2
WP_165431048.1\|712570_716389_-	DUF1983 domain-containing protein	G8C7R4	Escherichia_phage	0.0e+00	72.9
WP_165431049.1\|716453_717068_-	hypothetical protein	NA	NA	NA	NA
WP_165431050.1\|717152_717746_-\|tail	tail assembly protein	G8C7R3	Escherichia_phage	2.8e-85	83.4
WP_165431051.1\|717733_718465_-	peptidase P60	G8C7R2	Escherichia_phage	4.6e-138	87.2
WP_165431052.1\|718477_719248_-\|tail	phage minor tail protein L	G8C7R1	Escherichia_phage	8.6e-135	87.1
WP_165431053.1\|719247_719598_-\|tail	phage tail protein	G8C7R0	Escherichia_phage	1.9e-44	76.7
WP_165431054.1\|719654_720041_-	hypothetical protein	NA	NA	NA	NA
WP_165431055.1\|720098_723179_-\|tail	phage tail tape measure protein	A0A2P0WA05	Enterobacter_phage	7.4e-177	37.6
WP_165432293.1\|723178_723493_-	DUF1799 domain-containing protein	I6PD79	Cronobacter_phage	1.7e-20	69.7
WP_165431056.1\|723489_723801_-	hypothetical protein	I6PDG2	Cronobacter_phage	7.9e-39	73.8
WP_165431057.1\|723846_724524_-\|tail	phage tail protein	I6PBN6	Cronobacter_phage	9.1e-80	70.2
WP_165431058.1\|724576_724987_-	hypothetical protein	I6PDJ8	Cronobacter_phage	7.3e-32	49.3
WP_165431059.1\|724958_725567_-	hypothetical protein	G8C7Q1	Escherichia_phage	1.3e-53	55.7
WP_165431060.1\|725568_725919_-	hypothetical protein	I6PD77	Cronobacter_phage	1.7e-34	59.5
WP_165431061.1\|725920_726403_-	hypothetical protein	G8C7P9	Escherichia_phage	1.7e-48	59.4
WP_165431062.1\|726405_726627_-	hypothetical protein	G8C7P8	Escherichia_phage	3.9e-08	49.3
WP_165431063.1\|726666_727803_-\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	5.1e-160	76.7
WP_165431064.1\|727892_728657_-	hypothetical protein	G8C7P6	Escherichia_phage	1.6e-93	72.0
WP_165431065.1\|728764_728953_-	hypothetical protein	NA	NA	NA	NA
WP_165431066.1\|730672_732076_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	5.0e-205	77.9
WP_165431067.1\|732078_733389_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.5e-150	60.4
WP_165431068.1\|733363_734359_-\|terminase	terminase small subunit	C5IHM0	Burkholderia_virus	6.3e-29	35.7
WP_165431069.1\|734370_735351_-	hypothetical protein	S4TNN5	Salmonella_phage	2.9e-26	45.7
WP_165431070.1\|735767_736073_+	hypothetical protein	NA	NA	NA	NA
WP_165431071.1\|736094_736565_-\|lysis	lysis protein	A0A2I6TCF9	Escherichia_phage	2.6e-41	65.0
WP_165431072.1\|736561_737188_-	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	7.6e-89	77.8
WP_043865195.1\|737184_737469_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.5e-20	54.3
WP_125292274.1\|737458_737836_-	hypothetical protein	F1C592	Cronobacter_phage	1.8e-48	80.8
WP_165431073.1\|738617_738878_-	hypothetical protein	NA	NA	NA	NA
WP_165431074.1\|739469_740075_-	hypothetical protein	H9C175	Pectobacterium_phage	3.5e-91	78.5
WP_165432294.1\|740071_740191_-	YlcG family protein	K7PHH3	Enterobacteria_phage	4.8e-05	70.0
WP_165431075.1\|740300_740900_-	recombination protein NinG	A0A1P8DTE0	Proteus_phage	4.1e-68	63.4
WP_165431076.1\|740902_741502_-	DUF1367 family protein	S4TTI0	Salmonella_phage	5.2e-95	82.5
WP_165432295.1\|741539_741788_-	hypothetical protein	K7PHG9	Enterobacteria_phage	5.9e-21	56.1
WP_165431077.1\|741830_742055_-	DinI-like family protein	K7PM44	Enterobacteria_phage	2.8e-22	64.9
WP_165431078.1\|742243_742519_-	hypothetical protein	NA	NA	NA	NA
WP_165431079.1\|743087_745067_-	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	1.5e-191	51.1
WP_165431080.1\|745063_745816_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	8.0e-69	77.3
WP_165431081.1\|745812_746115_-	hypothetical protein	NA	NA	NA	NA
WP_165431082.1\|746111_746432_-	hypothetical protein	NA	NA	NA	NA
WP_165431083.1\|746434_747178_-	Replication protein P	A0A0M3ULE2	Salmonella_phage	3.1e-73	60.7
WP_165431084.1\|747161_748091_-	hypothetical protein	K7PGZ0	Enterobacteria_phage	3.6e-111	72.3
WP_165431085.1\|748426_748996_-	hypothetical protein	NA	NA	NA	NA
WP_144132464.1\|748998_749223_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	5.5e-34	91.9
WP_165431086.1\|749367_749760_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	2.0e-26	50.0
WP_165431087.1\|750052_750346_+	hypothetical protein	I6PDF6	Cronobacter_phage	8.1e-09	86.1
WP_165431088.1\|750283_750625_-	hypothetical protein	NA	NA	NA	NA
WP_165431089.1\|751215_754257_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	1.5e-243	55.9
WP_165431090.1\|754267_755344_+	recombinase RecT	H6WRX0	Salmonella_phage	2.6e-113	58.5
WP_165431091.1\|755377_755638_+	DUF4060 family protein	K7PHF4	Enterobacteria_phage	2.5e-14	50.6
WP_165431092.1\|755634_755982_+	hypothetical protein	I3PV00	Vibrio_phage	2.1e-24	54.2
WP_072042667.1\|756027_756219_+	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	8.3e-23	77.8
WP_165431093.1\|756199_757378_-\|integrase	site-specific integrase	K7P7J2	Enterobacteria_phage	6.0e-204	86.7
757593:757608	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3192212 : 3243263

uncultured_Caudovirales_phage(40.0%)

capsid,integrase,lysis,tail,head,terminase

attL 3186201:3186215|attR 3240735:3240749

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3186201:3186215	attL	NA	NA	NA	NA
WP_002438592.1\|3192212_3193268_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.8e-112	57.9
WP_165431782.1\|3193560_3194664_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.7e-59	39.9
WP_148052359.1\|3194674_3195928_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	6.6e-100	47.5
WP_165431783.1\|3196287_3197451_-\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	8.1e-153	66.6
WP_165431784.1\|3197714_3198284_-	hypothetical protein	A0A1R3Y5P7	Salmonella_virus	1.0e-31	39.7
WP_165430984.1\|3198431_3198680_-	hypothetical protein	G8C7S3	Escherichia_phage	5.2e-25	74.4
WP_165430983.1\|3198676_3198916_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.5e-18	58.4
WP_165430982.1\|3199111_3199336_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	9.2e-13	55.7
WP_165430981.1\|3199332_3199875_-	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	2.5e-56	61.2
WP_165430980.1\|3199885_3200182_-	hypothetical protein	NA	NA	NA	NA
WP_165430979.1\|3200206_3200686_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.1e-52	81.5
WP_165430977.1\|3201385_3201544_-	hypothetical protein	NA	NA	NA	NA
WP_165430976.1\|3201540_3201735_-	hypothetical protein	NA	NA	NA	NA
WP_165430975.1\|3201814_3201952_-	host cell division inhibitory peptide Kil	NA	NA	NA	NA
WP_165430974.1\|3201944_3202217_-	hypothetical protein	NA	NA	NA	NA
WP_165431785.1\|3202844_3203156_-	hypothetical protein	NA	NA	NA	NA
WP_165431786.1\|3203161_3203419_-	transcriptional regulator	NA	NA	NA	NA
WP_165431787.1\|3203819_3204197_-	hypothetical protein	A0A077KCC4	Edwardsiella_phage	1.7e-06	28.3
WP_165432333.1\|3204353_3205103_-	helix-turn-helix domain-containing protein	K7PK07	Enterobacteria_phage	2.0e-56	65.8
WP_165431788.1\|3205211_3205409_+	Cro/Cl family transcriptional regulator	K7PLQ6	Enterobacteria_phage	3.3e-22	84.1
WP_165431789.1\|3205519_3205804_+	hypothetical protein	A2SY75	Escherichia_phage	1.1e-18	62.0
WP_165431790.1\|3205842_3206640_+	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	1.6e-104	73.1
WP_165432334.1\|3207523_3208225_+	DNA replication protein	A0A2H4J1B6	uncultured_Caudovirales_phage	5.5e-80	64.5
WP_165431791.1\|3208367_3208637_+	hypothetical protein	A0A1B0VAJ0	Salmonella_phage	8.7e-18	53.6
WP_165431792.1\|3209225_3210134_+	phosphoadenosine phosphosulfate reductase family protein	A0A140XFY9	Salmonella_phage	1.0e-147	80.7
WP_072042663.1\|3210585_3210786_+	hypothetical protein	NA	NA	NA	NA
WP_165431793.1\|3210796_3211390_+	DUF551 domain-containing protein	A0A088CPS0	Enterobacteria_phage	7.6e-06	33.9
WP_165431794.1\|3211408_3211840_-	hypothetical protein	NA	NA	NA	NA
WP_165431795.1\|3211934_3212384_+	DUF1367 family protein	A0A0P0ZFW0	Escherichia_phage	6.9e-52	65.1
WP_165431796.1\|3212603_3212780_+	NinE family protein	C6ZR57	Salmonella_phage	1.7e-06	52.7
WP_165431797.1\|3212772_3213003_+	hypothetical protein	NA	NA	NA	NA
WP_165431798.1\|3213006_3213582_+	recombination protein NinG	A0A0P0ZG59	Escherichia_phage	1.0e-39	46.2
WP_165431799.1\|3213578_3213806_+	hypothetical protein	E5AGG2	Erwinia_phage	1.1e-24	68.0
WP_165431800.1\|3213802_3213973_+	hypothetical protein	NA	NA	NA	NA
WP_165431801.1\|3214207_3214987_+	antitermination protein	Q76H66	Enterobacteria_phage	1.8e-108	78.6
WP_165431802.1\|3215590_3215830_+\|lysis	lysis protein	A0A2H4JCI1	uncultured_Caudovirales_phage	2.0e-26	76.6
WP_165431803.1\|3215832_3216336_+	lysozyme	A0A2H4JCH1	uncultured_Caudovirales_phage	8.5e-75	77.2
WP_165431804.1\|3216325_3216775_+\|lysis	lysis protein	A0A2I6TCF9	Escherichia_phage	1.6e-35	69.7
WP_165431805.1\|3216948_3218013_+	acyltransferase	NA	NA	NA	NA
WP_165431806.1\|3218146_3218362_+	hypothetical protein	NA	NA	NA	NA
WP_165431807.1\|3218388_3218637_-	hypothetical protein	NA	NA	NA	NA
WP_165431808.1\|3218658_3219222_+\|terminase	terminase small subunit	A0A2H4J480	uncultured_Caudovirales_phage	1.6e-82	82.7
WP_165432335.1\|3219196_3220414_+\|terminase	PBSX family phage terminase large subunit	A0A2H4J196	uncultured_Caudovirales_phage	2.0e-218	88.1
WP_165431809.1\|3220416_3221892_+	DUF1073 domain-containing protein	A0A2H4IYV2	uncultured_Caudovirales_phage	6.7e-261	90.2
WP_165431810.1\|3221848_3222487_+\|capsid	minor capsid protein	A0A2H4J8F5	uncultured_Caudovirales_phage	2.5e-103	87.7
WP_165431811.1\|3222542_3222830_+	hypothetical protein	NA	NA	NA	NA
WP_165431812.1\|3222895_3224131_+	DUF2213 domain-containing protein	A0A2H4J159	uncultured_Caudovirales_phage	4.2e-184	83.8
WP_165431813.1\|3224141_3224636_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.8e-78	90.9
WP_165431814.1\|3224650_3225589_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.3e-161	87.8
WP_165431815.1\|3225966_3226371_+	DUF4054 domain-containing protein	A0A2H4J1A6	uncultured_Caudovirales_phage	2.9e-65	93.3
WP_165431816.1\|3226367_3226865_+	hypothetical protein	A0A2H4J488	uncultured_Caudovirales_phage	2.2e-70	79.6
WP_165431817.1\|3226851_3227235_+\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	2.7e-57	87.4
WP_165431818.1\|3227227_3227773_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	2.1e-82	81.8
WP_165431819.1\|3227776_3229267_+	DUF3383 domain-containing protein	A0A0P0I492	Acinetobacter_phage	1.5e-127	52.2
WP_151605845.1\|3229277_3229718_+	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	8.0e-61	79.5
WP_165431820.1\|3229721_3230147_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.3e-36	57.9
WP_165431821.1\|3230324_3232247_+	hypothetical protein	A0A0M4REK7	Salmonella_phage	1.1e-157	47.6
WP_165431822.1\|3232246_3232873_+	hypothetical protein	A0A0M3ULD5	Salmonella_phage	3.4e-65	69.8
WP_165431823.1\|3232869_3233175_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.3e-22	51.5
WP_165431824.1\|3233177_3234239_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	1.5e-142	69.5
WP_165431825.1\|3234250_3234604_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	6.1e-19	44.8
WP_165431826.1\|3234600_3235158_+	hypothetical protein	NA	NA	NA	NA
WP_165431827.1\|3235167_3235380_+	hypothetical protein	NA	NA	NA	NA
WP_165431828.1\|3235428_3236178_+	translation initiation factor IF-2	A0A2H4J8H6	uncultured_Caudovirales_phage	5.9e-96	69.2
WP_165431829.1\|3236177_3236531_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	8.4e-45	76.9
WP_165431830.1\|3236531_3237731_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	1.8e-139	65.2
WP_165431831.1\|3237727_3238393_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	2.3e-96	73.9
WP_165431832.1\|3238374_3239322_+	hypothetical protein	A0A0M3ULD8	Salmonella_phage	6.2e-26	65.6
WP_165431833.1\|3239321_3239723_+\|tail	tail fiber assembly protein	E7EKV7	Edwardsiella_phage	5.0e-09	36.8
WP_165431834.1\|3239802_3240045_+	DNA polymerase V	I6PD82	Cronobacter_phage	1.9e-16	53.8
WP_165431835.1\|3240046_3240367_+	hypothetical protein	K7PGV5	Enterobacterial_phage	5.1e-25	52.8
WP_165431836.1\|3241028_3243263_+	AAA family ATPase	Q7Y4B3	Escherichia_virus	1.7e-10	25.1
3240735:3240749	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP049608.1|WP_165430955.1|597483_597714_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP049608.1|WP_165430955.1|597483_597714_+|hypothetical-protein

597483_597714_+

76 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|96	0.4342105263157895	0.9736842105263158	1.0

568562-615477

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP049608

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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