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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP040038 Klebsiella pneumoniae strain KPC160125 chromosome, complete genome 2 crisprs WYL,DinG,RT,cas3,csa3,DEDDh 0 0 13 0
NZ_CP040039 Klebsiella pneumoniae strain KPC160125 plasmid pIncC-L125 0 crisprs DEDDh 0 0 0 0

Results visualization

1. NZ_CP040038
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040038_1 554165-554242 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040038_2 5211329-5211414 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 57257 : 68911 15 Enterobacteria_phage(70.0%) integrase attL 45391:45405|attR 68448:68462
DBSCAN-SWA_2 647738 : 677873 38 Salmonella_phage(81.25%) capsid,tail,lysis,head,plate,portal,integrase,terminase attL 647646:647664|attR 677945:677963
DBSCAN-SWA_3 712289 : 721753 8 Dickeya_phage(16.67%) protease,tRNA NA
DBSCAN-SWA_4 818257 : 844211 39 Pectobacterium_phage(22.22%) protease,head,integrase,tail attL 818182:818197|attR 832947:832962
DBSCAN-SWA_5 1189956 : 1231698 62 Klebsiella_phage(34.04%) integrase,terminase attL 1188037:1188051|attR 1196977:1196991
DBSCAN-SWA_6 1456628 : 1467515 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 2519113 : 2532430 12 Escherichia_phage(22.22%) transposase NA
DBSCAN-SWA_8 2575774 : 2582679 6 Bacillus_phage(33.33%) tRNA NA
DBSCAN-SWA_9 2882574 : 2944778 60 Salmonella_phage(41.18%) capsid,tail,transposase,protease,tRNA,terminase,holin NA
DBSCAN-SWA_10 2961587 : 2982027 32 Salmonella_phage(32.0%) integrase,transposase attL 2957529:2957543|attR 2988635:2988649
DBSCAN-SWA_11 3053377 : 3132978 89 Salmonella_phage(72.0%) lysis,tail,capsid,head,portal,tRNA,integrase,coat,plate,terminase attL 3098072:3098118|attR 3134639:3134685
DBSCAN-SWA_12 3852137 : 3900980 56 uncultured_Caudovirales_phage(68.75%) capsid,tail,protease,head,portal,tRNA,terminase NA
DBSCAN-SWA_13 4989047 : 4994872 8 Enterobacteria_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage