CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP049863	Leucobacter sp. HDW9C chromosome, complete genome	3 crisprs	WYL,DEDDh,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	2	23	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP049863_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049863_1

852690-852790

Orphan

Consensus_repeat	Method
CAGACCGCACGCTCGGCACCGAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049863_1

>merge|NZ_CP049863|1|852690-852790|CRISPRCasFinder
TGAACCGCGGTCTCGGCACCGGAACGCAATCTCGGCACCAGACCGCACGCTCGGCACCGAAACGCAACCTCGACACCAGACCGCACGCTCGGCACCGAAAC

>NZ_CP049863|1|1|852690-852790|CRISPRCasFinder
TGAACCGCGGTCTCGGCACCGGAAC	GCAATCTCGGCACCAGACCGCACGCTCGGCACCGAAACGCAACCTCGACAC
CAGACCGCACGCTCGGCACCGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049863.1\|WP_166289257.1\|834268_836308_-\|bifunctional-aldolase/short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|236241
NZ_CP049863.1\|WP_166289308.1\|862166_863348_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP049863.1\|WP_166289281.1\|851406_852414_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP049863.1\|WP_166289290.1\|854478_855552_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438
NZ_CP049863.1\|WP_166292983.1\|846440_847499_-\|rhamnose-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380655
NZ_CP049863.1\|WP_166289296.1\|856792_858229_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP049863.1\|WP_166289311.1\|863352_864558_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270308
NZ_CP049863.1\|WP_166289269.1\|844912_846358_-\|arabinose-isomerase	unknown	unknown	gnl\|CDD\|238323
NZ_CP049863.1\|WP_166289287.1\|853567_854482_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225088
NZ_CP049863.1\|WP_166289299.1\|858910_860314_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP049863.1\|WP_166289266.1\|844556_844910_-\|L-rhamnose-mutarotase	unknown	unknown	gnl\|CDD\|377501
NZ_CP049863.1\|WP_166289284.1\|852914_853391_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|376590
NZ_CP049863.1\|WP_166289260.1\|836373_837135_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP049863.1\|WP_166289305.1\|861296_862157_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP049863.1\|WP_166289275.1\|848622_849678_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP049863.1\|WP_166289272.1\|847534_848626_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119321
NZ_CP049863.1\|WP_166289293.1\|855621_856734_-\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP049863.1\|WP_166289278.1\|849674_851237_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP049863.1\|WP_166289263.1\|837221_843269_-\|family-78-glycoside-hydrolase-catalytic-domain	unknown	unknown	gnl\|CDD\|379971
NZ_CP049863.1\|WP_166289302.1\|860496_861300_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098

Protein	Function_ID	Function_description	E-value
NZ_CP049863.1\|WP_166289257.1\|834268_836308_-\|bifunctional-aldolase/short-chain-dehydrogenase	gnl\|CDD\|236241	PRK08324, PRK08324, bifunctional aldolase/short-chain dehydrogenase.	0
NZ_CP049863.1\|WP_166289308.1\|862166_863348_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.35689e-149
NZ_CP049863.1\|WP_166289281.1\|851406_852414_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.68647e-97
NZ_CP049863.1\|WP_166289290.1\|854478_855552_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	2.95053e-117
NZ_CP049863.1\|WP_166292983.1\|846440_847499_-\|rhamnose-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380655	cd20000, PBP1_ABC_rhamnose, rhamnose ABC transporter substrate-binding protein. Rhamnose ABC transporter substrate-binding protein similar to periplasmic binding domain of autoinducer-2 (AI-2) receptor LsrB from Salmonella typhimurium. The members of this group are homologous to a family of periplasmic pentose/hexose sugar-binding proteins that function as the primary receptors for chemotaxis and transporters of many sugar based solutes in bacteria and archaea and that are a member of the type 1 periplasmic binding protein superfamily. LsrB, which is part of the ABC transporter complex LsrABCD, binds a chemically distinct form of the AI-2 signal that lacks boron, in contrast to the Vibrio harveyi AI-2 signaling molecule that has an unusual furanosyl borate diester. Hence, many bacteria coordinate their gene expression according to the local density of their population by producing species specific AI-2. This process of quorum sensing allows LsrB to function as a periplasmic AI-2 binding protein in interspecies signaling.	4.0705e-148
NZ_CP049863.1\|WP_166289296.1\|856792_858229_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	7.13682e-83
NZ_CP049863.1\|WP_166289311.1\|863352_864558_-\|extracellular-solute-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.68579e-64
NZ_CP049863.1\|WP_166289269.1\|844912_846358_-\|arabinose-isomerase	gnl\|CDD\|238323	cd00578, L-fuc_L-ara-isomerases, L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins. FucIase converts L-fucose, an aldohexose, to its ketose form, which prepares it for aldol cleavage (similar to the isomerization of glucose in glycolysis). L-fucose (or 6-deoxy-L-galactose) is found in various oligo- and polysaccharides in mammals, bacteria and plants. AI catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion to D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.	1.27595e-116
NZ_CP049863.1\|WP_166289287.1\|853567_854482_-\|ABC-transporter-permease	gnl\|CDD\|225088	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning].	7.46541e-51
NZ_CP049863.1\|WP_166289299.1\|858910_860314_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	2.08682e-39
NZ_CP049863.1\|WP_166289266.1\|844556_844910_-\|L-rhamnose-mutarotase	gnl\|CDD\|377501	pfam05336, rhaM, L-rhamnose mutarotase. This family contains L-rhamnose mutarotase which is a glycosyl hydrolase that converts the monosaccharide L-rhamnopyranose from the alpha to the beta stereoisomer. In Escherichia coli this enzyme is the product of the rhaM gene (also known as yiiL). The tertiary structure has been solved, in complex with L-rhamnose, and the catalytic mechanism determined. His22 is the proton donor. The enzyme naturally exists as a dimer.	4.07596e-37
NZ_CP049863.1\|WP_166289284.1\|852914_853391_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|376590	pfam01668, SmpB, SmpB protein.	1.77944e-85
NZ_CP049863.1\|WP_166289260.1\|836373_837135_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.99918e-57
NZ_CP049863.1\|WP_166289305.1\|861296_862157_-\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	1.01523e-60
NZ_CP049863.1\|WP_166289275.1\|848622_849678_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	1.79592e-74
NZ_CP049863.1\|WP_166289272.1\|847534_848626_-\|ABC-transporter-permease	gnl\|CDD\|119321	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.	7.19966e-63
NZ_CP049863.1\|WP_166289293.1\|855621_856734_-\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP049863.1\|WP_166289278.1\|849674_851237_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP049863.1\|WP_166289263.1\|837221_843269_-\|family-78-glycoside-hydrolase-catalytic-domain	gnl\|CDD\|379971	pfam17389, Bac_rhamnosid6H, Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.	8.28092e-121
NZ_CP049863.1\|WP_166289302.1\|860496_861300_-\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	2.74601e-68

>NZ_CP049863.1|WP_166289281.1|851406_852414_+|LacI-family-transcriptional-regulator
MSVSVRDVAREAGVSVGTVSNVLNRPDIVSPATVERVTLAIEHLGFVRNDAARQLRAGRSHTIGLVVLDTRNPFFTDLAHGAQNRALTEGYTVLLGGSDESSDRESTLLDLFEEQRVAGVLISPVRTDLSRLWRLREAGTQVVLVDRGSSDHSFSSVSVDDVKGGSAAAQHLIDIGRRRIAFIGGPVDIEQVGQRLEGAQSVVARYADAALTIYPTEALTVLEGRRIAEQISALPPAKRPDAIFAANDLLAMGVIQALVMSGSLRVPEDIALVGYDDIDFASAAVVPITSVRQPSSEIGATAVELLLRETAGASEREQIVFQPELIARASTLGNR
>NZ_CP049863.1|WP_166289278.1|849674_851237_-|sugar-ABC-transporter-ATP-binding-protein
MERTHMNLAPSQTEHPGEALLSLRGAVKTFGPVVALADGTIELHAGEIHALVGENGAGKSTLVKVMAGLYTPDAGDFRIEGEPQSFRTVGDSKNAGISVIYQEPTLFPDLTVAENIFIGRQPKGALGLISRATMRAKAEELFAQLGVPIDPDRVAEGLSIADQQIIEIAKAISIDARVLIMDEPTAALSGVEVERLFTVARALRDRGAAIMFISHRFEEVFALTDRITVMRDGRYISTVMTRDATIEGIVKEMVGRDIDQLFPKEDAPIGDVVLKVENLTSAGVFSNVSFEVRAGEILGLSGLVGAGRSEVARAVFGVDGYDSGSVQMLGEKLPKRKVQHAITAGIGFVPEDRRKQGLVMDLSVGRNATLALRKRLARFGLISGSRERAVAQEWTQRLQVKTGSIDYAASTLSGGNQQKVVLAKWLSMHPRLLIVDEPTRGIDVGTKSEVHRLLSDLANEGIAIIMISSELPEVLGMADRVVVMCEGQVTATIDRADATPENVMYAATHNLAQATQGAPE
>NZ_CP049863.1|WP_166289275.1|848622_849678_-|ABC-transporter-permease
MSTAQVTPVKAPAKPNSRVGSILRARELPVTIALIALIGLTYAANPLFLSPQGTKDLLLNATIMIILAAGQTLLIITRNIDLSVGSMLGLVAYGTGTLFVMAEGIPIWIVFVIGILFGALLGLVNGLLVTVAKVPALVITLGTLYVFRGINNWWAGGTQYFADDRPDEFGNLAVDSFLGFPIITLIAILVVAVIAVILIGTRPGRDLYAIGSDPDAAILFGIKVQKRVLVAFLANGALAGLAGVLYAARFNSVGATTGTGMELNVVAAAVVGGVAIFGGSGSVIGAGLGALLLTTITGALTALRVDKFWQQAIVGILILAAILIDRLASLRTARKLKVSNSVEGAKQEETK
>NZ_CP049863.1|WP_166289272.1|847534_848626_-|ABC-transporter-permease
MTSTETSASLTIASTSKTLSGEPKGRTGIARWLLSRDAIMIGILLATILLFSLTIPRFASPVTVGFLLLDVIPVLLIAMPMTLIIITGEIDLSVASIAGLTSASLGVMWAAGFDMGTAIAISIGIGIVAGAFNGFLVSVVGLPSLAVTIGTLALFRGLALVVIGDNAVANFPPEFTAFFTSKIGSTGIPTVMIGVLLIVVIFGMLLHFTPFGRGLYAMGYSKEAARFVGIDIVKSKFWLYVASGGVSALAGIYWTLRYSSARSDNASGLELTVVAAVLLGGVSIFGGKGSIPGVFAGVLLIGTINYALRLGRVSDVVLIIVTGTLLIVSVITPSIGAAFKRWAHDRRIRKELPEPSGSGTPGV
>NZ_CP049863.1|WP_166292983.1|846440_847499_-|rhamnose-ABC-transporter-substrate-binding-protein
MTRRGRSGLALTASMIAVAAIALTGCSSSGSGDKADSGSGDGGGKSDQTITFIPKQLNNPYTDVVLGGGEKGAKAAGFKSSQVVGPLDASASSQVSFINAETQAGTNVIVIAANDPDAVCPSLKEARDGGAKIVAFDSDTNKDCRDIFVSQVVAKDVALIQLKLISEQIGGEGDIAILSATANATNQNEWIKYMEEELKSNPDYSKIKLVTKVYGDDDDTKSFQEAQGLMQAYPNLKGIISPTTVGIAATARYLSTSEYKGKVALTGLGLPNEMRPFVKDGTVTEFALWDPAQLGYVAAFAGMALDDGSITGKEGDTFKAGDLGERKVGADGLVIVGPPTVFNKDNIDDYDF
>NZ_CP049863.1|WP_166289269.1|844912_846358_-|arabinose-isomerase
MHSAPDRNISELLPMKTRRKPRIGLVAGGLGTYWPQFPALLPQLQESSRYVSDRFAEMDAEVTDVGFISDAQEGAAAAEELRRADCDLIVLFLTTYLTASMVLPIAQRSGAPVLVIDLQPTEKMDHASFTTGEWLAYCGQCPVPEVGNVFRRAGIPFRSVSGWLRQESAWHRIEQWIAAAHVRAALRHARHGLMGHLYPGMLDVSTDLTLLPATFGSHVEVLEFDDLRVRIDAVSEAETAERIGLARELFTVDDSVKEEDFAWGARVSVALDRLIDDFDLDSLAYYHRGLDGELHERIGAGMILGASLLTARGIPATGEFELRTTVAQLASQVIGAGGSFCEIQALNFEDNVVEMGHDGPAHLAVSARDPLLRGLGVYHGKRGWGVSVEFDVQQGPVTLLGLGQDADGTLSFVVSEGTAVPGPLLQIGNTTTRVDFARDPGEWVDAWSATGVGHHWSLSTGSRAETYRAAASLLGIDYREV
>NZ_CP049863.1|WP_166289266.1|844556_844910_-|L-rhamnose-mutarotase
MRRYCFQLRLRPERMAEYRERHAAVWPEMLQALADTGWQNYSLFVSEDGLLIGYLEAEKPLNELQAAMAATDVNAKWQAEMAPFFADLDGAPDDGFLELTEVFHLEDQLTQRDNARK
>NZ_CP049863.1|WP_166289263.1|837221_843269_-|family-78-glycoside-hydrolase-catalytic-domain
MEKTTRDRWRAKRAAAVLLSIALVSTGNFAATAAASAAPPATMSAVGLQANARTKPLGIAVEAPTLSWKSEAEGRGVVQSAYEVRVGTSSGSDDMWSTGKVMSDDQLNVVYGGSALQSQTRYYWQVRLWDGNDQQGEWSKTSWFETGLKTSDWKADWIGKSGSGEVDKWADYTADIDFDIDRLAIGTFFRAASTSNAYMWQISTADGSGIPKFRPHKRVNNTYTLLDNKPIPGITSDELLTGTHRLSVTVDGNTITTKLDNTKIDERTDASFAKGFIGFRQDYANNIDESADIKAVKVTAKNGDVLLDTDFSNGNPFNGGTITPAGLRVGNRSDVLFVSKDANKPLMRTEFNTESGKTVASARAYASAHGVYELQLNGSPVGDQKLAPGSTDYTKRIQYQTYDVTDQIKDGANAFGAELGAGWWAGKNGMWGPGTFGQDVGLIAQLRIDYTDGSHQTVKTDDSWKSHFGPYAAADNIDGEHYDANAEQNGWDRSGYDDGAWSPVVIGASDTAKLVAQPDEPVRVTQELPVQKRTDSPGVENGYIYDLGQNMVGVARMKIQGKAGDTVKIRYAEELYSDGRFYVGNLRAAKVTDYYTFKSDGVVEYTPKFTQHGFRYIEISGAVSAPAAEDVTGVVWGSDLASTGSLDTSDAMLNQLASNISWGQRGNFLSIPTDTPARDERLGWTGDINVFAPTASYLRDTRAFLQKWMGDLTDSARPNGDLPGIAPSVPGVDLGTGVGWSDSGITVPYAVWHAQGSDTIIKQNYELMKKYLELVKSGAGDDLIDTERGNWNDWLNLDDNTGTAVLSTAYYAEDARMLSEMAAAIGEDADAAAYAQLSKDVRAAFTAQLIAPDGTVQGGSQTAYAMALGMDLVTDPELRVKVGQKYIEKLAKSDNHLTTGFLGTPWLLPALSSIGRNDIAYTVLSKKDYPSWGYEIENGATTMWERWNSIKPDGSFGDEGMNSFNHYAYGAVGDWMYRNIGGISPIEPGYHSFKVAPSLGGGLTHGSGKYESVYGTIASDWKLDGGNLALDVTVPVNTTAQVVVPAQHQIAVVEGGKALSEVDGVSGIKAADGSVTFTIGSGKYKFVVDPDLATFGGVLDALKNVEDRAGELAQKGDLSAADRGHIADEIGAAKDAVQEALEAVRSDNCEAAQAGLAKGAKRVTELRSWLDESSVDGPVKRDLKTRLDAAESQFGSAMASVLKLKVVLPPATTAARPGASVDGALEIVHNGSVELTNLQATVSVVGWKADPVKLKFDKLAGGDQAQLPFTTSVPQHQNPANYPARVKFSFTTPEGTFTLNNETAWVQVDSAVQIGDVTASANLDDGQATAAVTIVNDGTSSVSGQVVLTPTGGPVAAPASERITIPAAESRVVEVPMLAGLEGISGDAPLSVSFVDRGVSLAKKDAALTIGMAAPGAMDLPGQLDHVDFGNTVSETAHAVQAAAASGTAPNEAGLTRRYANTNNPGSWFSAEYTVEAGKPFLLRTLETYDGAHTKKYNIWVDGVLVRKVEIPRSEGGQGTKAHQVLIDDPSVLQNTGKVRIKFEYPSDASGFWDPSIADSWVLPVQADTTPPLVAATVDSAVPGDNGWFRGDSSVTLSATDDRAGTPAVQFGGAQGWEDYTAPIPVTGEGQHELSYRANDVAGNSSGEQKVQVWIDSTAPVSSVKTIRGSEAANLNIASVSFSATDELSGVAAVRYRVDGGQWQLAGADAVPVVGYGSHLVEYFAADVAGNTEALRSTEIELTAPSQKFTVSFDSAGGSAVASVPNVASGSKVSRPSDPKRKGYVFAGWFVGSKAYDFSAPVTANLKLTAKWEKDNSGTTPRDKPVFKDVPKQQQFYTEIDWMHQMKYTTGFKRSDGLYYEPKQELTREAMAAFMYRLKGSPAVKLPAASPFADVKPSDKFYREIVWMYQQKLAKGTKQATGKPLYGPKQALTREAMAAFMYRFEGSPKFTAPKQSPFADMKPGSDFYTEISWMQASKLTTGFKQGSVRNYEPKRALSREAMAAFIYRLETQYRK
>NZ_CP049863.1|WP_166289260.1|836373_837135_-|DeoR/GlpR-transcriptional-regulator
MAVSGSIDAERRRKDLADLIARGEEISIDEARLKFNVSAMTIRRDIEALENEGVVRRVRGGAVSAPAPRSYDDRLATRSAAKLAIARKALALVPHRGAIALDASTTVHALAEILGGDRELTVCTNSVQTFEVLTRLNGIDAQLTGGSYERVTGSLVGPIANAGARLLFTQVFFTSAAALHPEGGTSESSLAEAEVKRHLAESAERTVLCVDSSKLGGRSVGAALELASVSTLITELPADDPRLDPYRHSVDVL
>NZ_CP049863.1|WP_166289257.1|834268_836308_-|bifunctional-aldolase/short-chain-dehydrogenase
MNGHVTADTLIARSNRLGADKKNTNFAGGNTSAKGQAQDPVTGEPVELMWVKGSGGDLGTLRETGLSVLRLDRMRALVDVYPGLDREDEMVAAFDYCLHGKGGATPSIDTAMHGLVNAAHVDHLHPDSGIAIATAADGEALTAKIFGGKVVWVPWRRPGFQLGLDIAAIQQANPEAIGCILGGHGITAWGDTSEECERNSLWIIDTAAAYIAEHGAAEPFGAKVEGFEALPEAERRARAAALAPTIRGLASHDKPMVGHFTDSEAVLEFLSREKLAALAALGTSCPDHFLRTKVKPLVLDLPATASVEDQISRLHELHEAYRADYRAYYEAHADADSPAMRGADPLIVLIPGVGMFSYGANKQTARVAGEFYVNAINVMRGAEALSTYAPISDAEKFRIEYWALEEAKLQRLPKPKSHQGRIAFVTGAASGIGKAIATRLAAEGACVVVADLDLEKAQAAAAELGSSDVAVGIAANVADAEAVRAAMDAAVLAFGGVDLVVNNAGLSLSKPLLETTEKDWDLQHDVMAKGSFLVSKAAAKALIEQGMGGDIIYISSKNSVFAGPNNIAYSATKADQAHQVRLLAVELGEYGVRVNGINPDGVVRGSGIFASGWGANRAATYGVNEEDLGQFYANRTILKREVVPENVADAVYVLTGPELSRTTGLHIPVDSGVAAAFLR
>NZ_CP049863.1|WP_166289284.1|852914_853391_-|SsrA-binding-protein-SmpB
MAKETGEKLIASNKKARHEYLIIDTYEAGMVLTGSEVKSLRMGRASLVDGYVFIERGEAWLDAAYIPEYLNGSWTNHAPRRKRKLLLHRHEIDKLYQKTREGGMTIVPLRMYFLDGRAKVEIALARGKKEYDKRQTLRERQDRREAERAISARKHLGE
>NZ_CP049863.1|WP_166289287.1|853567_854482_-|ABC-transporter-permease
MRVGLVLGEVWSGLRRNMSVVISVILVTFVSLTFVGAAIIMQLQVQQMKTFWYDRAQVAVYLCTNSEQSQTCSGKDADKEQIAAVEAALKSDELKPFIDDFFFMTHDQAYKEFTKQFKGNPIVDITKPEQLNQTFWIKLKDPSKSEIIQEAFSGIPGVQSVVDQRSLLDRIFLFLGVASYTAIAIAGLMLVAAMLLISTTIRLSAFSRRREIGIMRLVGASNRFIQTPFILEGVIAALIGAVLAGGASVAIVKFFVQDFLAKEVPFTSYITVDQSLIVPPILILVGAILSSIAAKIAITRYLRV
>NZ_CP049863.1|WP_166289290.1|854478_855552_-|cell-division-ATP-binding-protein-FtsE
MILFENVTKKYRGTAKPALDGIDLKIDRGEFVFIVGASGSGKSSCLRLILREDQPSVGKIHVLGQDLSKISSRKVPYFRRSLGTVFQDFRLLTNKTVYDNVAFTLQVIGKSRGFIQEAVPDTLEMVGLANKAKRFPHELSGGEQQRVAIARAIVNKPAILLADEPTGNLDPATSLGIMQLLRSINAAGTTVVMATHEATFVDIMQQRVVELSQGVIVRDEQGGGYGETASIPIADLSEAGAQVLRTSEAVVRAALQPDGTPVVADPAPVVLPEATPEPPAAPEASVFEEPRPFEGEGDDDEDLDVTRRAGEEPAIPSFLQQGQPMDPVQMSETGNLAQHLGLDRKDDDEQTDVGPVR
>NZ_CP049863.1|WP_166289293.1|855621_856734_-|peptide-chain-release-factor-2
MLELDFNSRIRALRATYADIAAVMDLPKLDREIAELEEQAAAPDLWDDPAAAQQVTSGLSHRQARVKRLRSLADRLDDLEVLVELALEAEDEDSAAEATAEIAAIEGLVQELEVQTMLSGEYDEYPAVMTIRAGAGGVDAADFAEMLQRMYLRWGEHHDYKVTVMETSYAEEAGIKSTTIEFDAPYAFGSLSVEAGTHRLVRMSPFNSAGKRQTSFAAVEVIPLMPEAESVDIPESDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGTVVSMQNEKSQIQNRAAAMRVLQSRLLILQREAEAAKKKELAGNITASWGDQMRSYVLAPYQMVKDLRTEFEVNNPQNVFDGDLDGFIAAGIRWRSLSQNQD
>NZ_CP049863.1|WP_166289296.1|856792_858229_-|PLP-dependent-aminotransferase-family-protein
MIVQRISARRLTELLGSWRGDGHSYLELSESISMLVRDGRIVPGAALPAERPLSEALGVSRTTVSASYQRLRETGVAASRQGSGTVVRTPRRENSELWSSAANTDIDFSGACPEPWRGIEELSARALAEHPEVFRLSGYDTIGLPMLRAAIADRYTSRGLPTSPEQIMVTLGAQHAIFLIARTLLRRGDRSLIESPSYPHAREALAAAGALVAELPVDIGGYDAAAMLDIAARTSPRLAYLIPDHHNPTGLSMPPELRAKLIATLSAQGTYVIADETTAELTLREPRTIIPFAASAEQAHQQDNVITVGSLGKTVWGGLRVGWIRAAPDLIGQLETARRVGDLGTGTWEQVVATLAMERYDEILALRTRQLTSRHRVLTEQLGALLPSWSLSPAEGGACVWVDLGEAVSSRLGRHSARLGLRLVPGPRFGSPGTFERYVRLPFTEPEDRLLEGVGLLHEAWQCIGEPAGSQVLEGSVI
>NZ_CP049863.1|WP_166289299.1|858910_860314_-|APC-family-permease
MTAPAKAKGGTLKRNLGLWAIVGLGLGYMTPTVVFDTFGIVSQETNNVVPLAYLVALIVMMFTAVSYGKMSGAIPSAGSAYTYVKESIHPNLGFMVGWTSLIDYVLLPMVNALIIRNYLEQLFPGIWSGIWVILYCILVTSVIYLTMRGTSNMNMILLVFSIVVMIVFVVLVWAQLSAGDGAGTVASIKPFFHSGVEMGAVLAGATVVCFSFIGFDAVTMYTEEAKHPRIMPKAILFTVILGGAIFLIAGYFTQLRFPDFNEFNEASLSDSALTQIGEVVGGKGFQAVLTSAGFAATLASGLASHASVSRMLLVMGRNNVLPKKFFGYINPKTHTPTLNIILVGVICLLAMSFNLDLIASFINYGALIAFTFVNISVIALFAVRRGRHKKLKDIFNYIVMPAIGMLLTGLLWVNLSLDALVGGIIWTVLGFGYLVYITKGFKRKVAGFDESQPVTGYNKVPEGAEID
>NZ_CP049863.1|WP_166289302.1|860496_861300_-|ABC-transporter-permease
MKKWSLGRAFVPVASIIVLIYLLLPIVNVIIFSFNEKRGRNNIKWNGFTLDNWQNICGAPEVCTAFSNSIIVGVVSTVVATVLGTLIAIALVRYRFRFRSTISLLLFTPMATPEVVLGAGLAYQFLTMGVEKGLGTIILAHIMFCISYVVVVVKARVASLDPAIEEAGRDLYASPGQVFFRITLPTLMPGIIGAALLSFALSFDDFIITNFNSGAVSTFPKFIYTAAAKGVPAQANVLASIVFVGALLLVIIVQVVRINNQKRLASK
>NZ_CP049863.1|WP_166289305.1|861296_862157_-|ABC-transporter-permease
MAFTAFAANTEVVEQAPKKGRWIVLLLLAPGIMYMLLFFVTPFIQLIITSLQVPAEGQGIGDYVAALQFTNYWAAIQEYWPQILRSFVYALIGTVVGLLISYPLAYLIGVRVRSKPMLQGILLILVIAPFFISFLLRTLSWKQILPTEWMGTDFSVVFGLVYNFIPFMVLPIFASLQSLDMRLLEAGSDLYASPATVFRKVTLPLSMPGVVSGTLLSFIPMSGDYVNASRQFLGSIDTAMVGNVIESNFLQTQNYPLAASLSIVLMVVILVLIIAYVRRSGTEDLL
>NZ_CP049863.1|WP_166289308.1|862166_863348_-|ABC-transporter-ATP-binding-protein
MNVHSFAESGADLELVGIQKRFPGFTAVERMDLLIPAGSFFALLGPSGCGKTTTLRLVAGLEEPTTGSIKIGGRDVTALGPHKRPVNTVFQSYALFPHMTVVENVAFGLRRRGIADPLGKAHAALQLVELDNLAARKPVQLSGGQQQRVALARAIVNRPALLLLDEPLGALDLKLRRQMQQELKQIQQEVGLTFLHVTHDQEEAMTMADTVAVMNKGRIEQQGAPEELYDLPRTVFVASFLGQSNLFEVEVVGTTDQAITTSHENGTRITVPRARSVRESGSITVGVRPEKLRLHSEAPVADAAVNVVGPGRVTDVSFIGVSTQYTVEVPGAGEVQVFAQNVEVGPSVQLGDEVWLSWQVSHTFGLADDRLETGALTADLSTRTIAAQSKISG
>NZ_CP049863.1|WP_166289311.1|863352_864558_-|extracellular-solute-binding-protein
MAQQLPEDPIVRNIVSMLRGAQFNRRQLLRGAAIGAAGLGTAALASCAPSSGGGSSKDEIIWGNWTYYLDFDESSSTNPTLEAFMKKTGIQVNYAEDIDDNNTFYGKIKDALKLDQFTGYDVITMTDWMDARLILADQVQEFDYANLPNVKSNLLDTEWDALAEDPGRKHSIPWQLPTTGWAWNKKALPKGLHELDDLLQPELKGKVQVLSEMRDTIGLILSGQGVDPSGKWGDAEFDKAMEWLVDALDSGQISNVKGNDYTQDLETGTMLAGFVWTGDVVMMNVELDKQWGVDLPEFGGLIARDSFTVPNGTSAANKKKVEELINYYYQPEIAAEVAAYVAYVTPVKGAQEAMKKVDPSQVDNPAIFPTEADMKKLRTFRILTPEEDNRYSKTFQKALGL

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Crispr_ID: NZ_CP049863_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049863_2

2432493-2434534

TypeI-E

Consensus_repeat	Method
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	PILER-CR
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CRISPRCasFinder
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CRT
CTCTTCTCCGCGTGCGCGGAGGTATTTCCGGAGTAAC	PILER-CR

33 spacers

cas2,cas1,cas3,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP049863_2

>merge|NZ_CP049863|2|2432493-2434534|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
CTCTTCTCCGCGTGCGCGGAGGTATTTCCTACGGTCACAACGCGGCCGCTGGCAACTGCCTCTCTTCTCCGCGTGCGCGGAGGTATTTCCAAATGGAGCGCCATTAAGGCCAACTCAAAAGGCTCTTCTCCGCGTGCGCGGAGGTATTTCCGTCGACTCAGCCGAATCAAGACCCGAATCACGCTCTTCTCCGCGTGCGCGGAGGTATTTCCTTCTTAGGCTCAGACTTATCTGCGAACCATCCCTCTTCTCCGCGTGCGCGGAGGTATTTCCTGGGCCTTGTGGCAGAGGTAGCCGCGATCGACCTCTTCTCCGCGTGCGCGGAGGTATTTCCGTTATGCGCGACCATGCAGAGCGTGGCGTCAGCTCTTCTCCGCGTGTGCGGAGGTATTTCCGGCGTTCACCGAATACACGGAACGCATTAACCCTCTTCTCCGCGTGCGCGGAGGTATTTCCGATGAGTGAGGATCAGTGACACTCACTGAGGGCTCTTCTCCGCGTGCGCGGAGGTATTTCCCGAGATGCGTATTTTGACGGTGCGTCGGCCGTGCTCTTCTCCGCGTGCGCGGAGGTATTTCCAAAGCGTCCACAGGGATGACGCGCACCTGGCGCTCTTCTCCGCGTGCGCGGAGGTATTTCCCAAAGCCGCCGACCCTGCCGCCTACATTGCCGCTCTTCTTCGCGTGCGCGGAGGTATTTCCGAAGCCCGTGAATGGCTCACCATCTGCGTGGACTTTTCTCCGCGTGCGCGGAGGTATTTCCGCTCCAAGGCTCGCCCGTCTTCCGCTGCGCTCCTCTTCTCCGCGTGCGCGGAGGTATTTCCATTACCGAAGCCGTCATTAAAGGCATCGTTGACTCTTCTCCGCGTGCGCGGAGGTATTTCCAACGTGATCGAGGTGGTCACAATTGAGGACGACTCTTCTCCGCGTGCGCGGAGGTATTTCCCAGAGTGTGATCTCGACGAGCTTGCCGTGCCGCTCTTCTCCGCGCACGCGGAGGTACTTCCGACCGAGACCCACGTATCGTGGGCAAACAGATCTCTTCTCCGCGTGCGCGGAGGTATTTCCGAGTTTGGCTGAAGTGCGGTAATGTCCGGCAGCTCTTCTCTGCGTGCACGGAGGTATTTCCCCAGCCACCGCAAGATACGACCATTGCCGGTCCTCTTCTCCGCGTGCGCGGAGGTATTTCCGGGTGTTGAGCTCGACCCGACTACCGCTCAGATTCTTCTCCGCGTGCGCGGAGGTATTTCCTTCCATCCTCGCGCAGCCCGTACTTGCCAATGCTCTTCTCCGCGTGCGCGGAGGTATTTCCGTAACCGATCACGTTGCCAGCCTGGACGGGTGCTCTTCTCCGCGTGCGCGGAGGTATTTCCTCGCCATCAAGAAGACAGCTGACCGTGATTCACTCTTCTCCGCGTGCGCGGAGGTATTTCCTCGCCATCAAGAAGACAGCTGACCGTGATTCACTCTTCTCCGCGTGCGCGGAGGTATTTCCTTCTCACTCTGGTGGGAGGTGCGGCGGTAGCTCTCTTCTCCGCGTGCGCGGAGGTATTTCCGTGGGAGGCCGCGAAAGCTGCGTACGTGATCCCTCTTCTCCGCGTGCGCGGAGGTATTTCCTACGCCGCCCCAGCGGGCACCCCGGTACTTGCCTCTTCTCCGCGCGCGGAGGTATTTCCCATGCCTGAGGCAGATCGCCACGAGAGTTCACCTCTTCTCCGCATGCGCGGAGGTATTCCCGGAGAGCTCGTCGACGGGAACCTGCACCTCAACTCTTCTCCGCGTGCGCGTAGGTATTTCCAGTGTAGCGACGCAGCGCCTGCACTACAGGTGCTCTTCTCCGCGTGCGCGGAGGTATTTCCGGGGTAACTCTGGGCCTGGCCCTCGGCTGGATCTCTTCTCCGTGTGCGCGGAGGTATCTCCCTGTTCTTCGCTAGGCTCGCCTACCAACAAACCTTTTCTCTGCGCATGCGGAGGTATTTTCAATGTTTGGATGCTTGACGAGAACGATGCATTCTGATTCTCCGCACATGCAGAGGTATTGCC

>NZ_CP049863|2|1|2432493-2434047|PILER-CR
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TACGGTCACAACGCGGCCGCTGGCAACTGCCT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AAATGGAGCGCCATTAAGGCCAACTCAAAAGG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTCGACTCAGCCGAATCAAGACCCGAATCACG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCTTAGGCTCAGACTTATCTGCGAACCATCC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TGGGCCTTGTGGCAGAGGTAGCCGCGATCGAC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTTATGCGCGACCATGCAGAGCGTGGCGTCAG
CTCTTCTCCGCGTGTGCGGAGGTATTTCC	GGCGTTCACCGAATACACGGAACGCATTAACC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GATGAGTGAGGATCAGTGACACTCACTGAGGG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CGAGATGCGTATTTTGACGGTGCGTCGGCCGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AAAGCGTCCACAGGGATGACGCGCACCTGGCG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CAAAGCCGCCGACCCTGCCGCCTACATTGCCG
CTCTTCTTCGCGTGCGCGGAGGTATTTCC	GAAGCCCGTGAATGGCTCACCATCTGCGTGGA
CTTTTCTCCGCGTGCGCGGAGGTATTTCC	GCTCCAAGGCTCGCCCGTCTTCCGCTGCGCTC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	ATTACCGAAGCCGTCATTAAAGGCATCGTTGA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AACGTGATCGAGGTGGTCACAATTGAGGACGA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CAGAGTGTGATCTCGACGAGCTTGCCGTGCCG
CTCTTCTCCGCGCACGCGGAGGTACTTCC	GACCGAGACCCACGTATCGTGGGCAAACAGAT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GAGTTTGGCTGAAGTGCGGTAATGTCCGGCAG
CTCTTCTCTGCGTGCACGGAGGTATTTCC	CCAGCCACCGCAAGATACGACCATTGCCGGTC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GGGTGTTGAGCTCGACCCGACTACCGCTCAGA
TTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCCATCCTCGCGCAGCCCGTACTTGCCAATG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTAACCGATCACGTTGCCAGCCTGGACGGGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TCGCCATCAAGAAGACAGCTGACCGTGATTCA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TCGCCATCAAGAAGACAGCTGACCGTGATTCA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCTCACTCTGGTGGGAGGTGCGGCGGTAGCT
CTCTTCTCCGCGTGCGCGGAGGTATTTCCGTGGGAGGCCGCGAAAGCTGCGTACGTGATCCCTCTTCTCCGCGTGCGCGGAGGTATTTCCTACGCCGCCCCAGCGGGCACCCCGGTACTTGCCTCTTCTCCGCGCGCGGAGGTATTTCCCATGCCTGAGGCAGATCGCCACGAGAGTTCACCTCTTCTCCGCATGCGCGGAGGTATTCCCGGAGAGCT	CGTCGACGGGAACCTGCACCTCAACTCT
TCTCCGCGTGCGCGTAGGTATTTCCAGTGTAGCGACG	CAGCGCCTGCACTACAGGTGCTCT


>NZ_CP049863|2|2|2432493-2434534|CRISPRCasFinder
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TACGGTCACAACGCGGCCGCTGGCAACTGCCT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AAATGGAGCGCCATTAAGGCCAACTCAAAAGG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTCGACTCAGCCGAATCAAGACCCGAATCACG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCTTAGGCTCAGACTTATCTGCGAACCATCC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TGGGCCTTGTGGCAGAGGTAGCCGCGATCGAC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTTATGCGCGACCATGCAGAGCGTGGCGTCAG
CTCTTCTCCGCGTGTGCGGAGGTATTTCC	GGCGTTCACCGAATACACGGAACGCATTAACC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GATGAGTGAGGATCAGTGACACTCACTGAGGG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CGAGATGCGTATTTTGACGGTGCGTCGGCCGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AAAGCGTCCACAGGGATGACGCGCACCTGGCG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CAAAGCCGCCGACCCTGCCGCCTACATTGCCG
CTCTTCTTCGCGTGCGCGGAGGTATTTCC	GAAGCCCGTGAATGGCTCACCATCTGCGTGGA
CTTTTCTCCGCGTGCGCGGAGGTATTTCC	GCTCCAAGGCTCGCCCGTCTTCCGCTGCGCTC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	ATTACCGAAGCCGTCATTAAAGGCATCGTTGA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AACGTGATCGAGGTGGTCACAATTGAGGACGA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CAGAGTGTGATCTCGACGAGCTTGCCGTGCCG
CTCTTCTCCGCGCACGCGGAGGTACTTCC	GACCGAGACCCACGTATCGTGGGCAAACAGAT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GAGTTTGGCTGAAGTGCGGTAATGTCCGGCAG
CTCTTCTCTGCGTGCACGGAGGTATTTCC	CCAGCCACCGCAAGATACGACCATTGCCGGTC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GGGTGTTGAGCTCGACCCGACTACCGCTCAGA
TTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCCATCCTCGCGCAGCCCGTACTTGCCAATG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTAACCGATCACGTTGCCAGCCTGGACGGGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TCGCCATCAAGAAGACAGCTGACCGTGATTCA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TCGCCATCAAGAAGACAGCTGACCGTGATTCA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCTCACTCTGGTGGGAGGTGCGGCGGTAGCT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTGGGAGGCCGCGAAAGCTGCGTACGTGATCC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TACGCCGCCCCAGCGGGCACCCCGGTACTT
GCCTCTTCTCCGCGCGCGGAGGTATTTCC	CATGCCTGAGGCAGATCGCCACGAGAGTTCAC
CTCTTCTCCGCATGCGCGGAGGTATTCCC	GGAGAGCTCGTCGACGGGAACCTGCACCTCAA
CTCTTCTCCGCGTGCGCGTAGGTATTTCC	AGTGTAGCGACGCAGCGCCTGCACTACAGGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GGGGTAACTCTGGGCCTGGCCCTCGGCTGGAT
CTCTTCTCCGTGTGCGCGGAGGTATCTCC	CTGTTCTTCGCTAGGCTCGCCTACCAACAAAC
CTTTTCTCTGCGCATGCGGAGGTATTTTC	AATGTTTGGATGCTTGACGAGAACGATGCATTC
TGATTCTCCGCACATGCAGAGGTATTGCC

>NZ_CP049863|2|1|2432493-2434534|CRT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TACGGTCACAACGCGGCCGCTGGCAACTGCCT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AAATGGAGCGCCATTAAGGCCAACTCAAAAGG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTCGACTCAGCCGAATCAAGACCCGAATCACG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCTTAGGCTCAGACTTATCTGCGAACCATCC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TGGGCCTTGTGGCAGAGGTAGCCGCGATCGAC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTTATGCGCGACCATGCAGAGCGTGGCGTCAG
CTCTTCTCCGCGTGTGCGGAGGTATTTCC	GGCGTTCACCGAATACACGGAACGCATTAACC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GATGAGTGAGGATCAGTGACACTCACTGAGGG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CGAGATGCGTATTTTGACGGTGCGTCGGCCGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AAAGCGTCCACAGGGATGACGCGCACCTGGCG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CAAAGCCGCCGACCCTGCCGCCTACATTGCCG
CTCTTCTTCGCGTGCGCGGAGGTATTTCC	GAAGCCCGTGAATGGCTCACCATCTGCGTGGA
CTTTTCTCCGCGTGCGCGGAGGTATTTCC	GCTCCAAGGCTCGCCCGTCTTCCGCTGCGCTC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	ATTACCGAAGCCGTCATTAAAGGCATCGTTGA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AACGTGATCGAGGTGGTCACAATTGAGGACGA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CAGAGTGTGATCTCGACGAGCTTGCCGTGCCG
CTCTTCTCCGCGCACGCGGAGGTACTTCC	GACCGAGACCCACGTATCGTGGGCAAACAGAT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GAGTTTGGCTGAAGTGCGGTAATGTCCGGCAG
CTCTTCTCTGCGTGCACGGAGGTATTTCC	CCAGCCACCGCAAGATACGACCATTGCCGGTC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GGGTGTTGAGCTCGACCCGACTACCGCTCAGA
TTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCCATCCTCGCGCAGCCCGTACTTGCCAATG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTAACCGATCACGTTGCCAGCCTGGACGGGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TCGCCATCAAGAAGACAGCTGACCGTGATTCA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TCGCCATCAAGAAGACAGCTGACCGTGATTCA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCTCACTCTGGTGGGAGGTGCGGCGGTAGCT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTGGGAGGCCGCGAAAGCTGCGTACGTGATCC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TACGCCGCCCCAGCGGGCACCCCGGTACTT
GCCTCTTCTCCGCGCGCGGAGGTATTTCC	CATGCCTGAGGCAGATCGCCACGAGAGTTCAC
CTCTTCTCCGCATGCGCGGAGGTATTCCC	GGAGAGCTCGTCGACGGGAACCTGCACCTCAA
CTCTTCTCCGCGTGCGCGTAGGTATTTCC	AGTGTAGCGACGCAGCGCCTGCACTACAGGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GGGGTAACTCTGGGCCTGGCCCTCGGCTGGAT
CTCTTCTCCGTGTGCGCGGAGGTATCTCC	CTGTTCTTCGCTAGGCTCGCCTACCAACAAAC
CTTTTCTCTGCGCATGCGGAGGTATTTTC	AATGTTTGGATGCTTGACGAGAACGATGCATTC
TGATTCTCCGCACATGCAGAGGTATTGCC

>NZ_CP049863|2|2|2434200-2434358|PILER-CR
	TACGGTCACAACGCGGCCGCTGGCAACTGCCT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AAATGGAGCGCCATTAAGGCCAACTCAAAAGG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTCGACTCAGCCGAATCAAGACCCGAATCACG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCTTAGGCTCAGACTTATCTGCGAACCATCC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TGGGCCTTGTGGCAGAGGTAGCCGCGATCGAC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTTATGCGCGACCATGCAGAGCGTGGCGTCAG
CTCTTCTCCGCGTGTGCGGAGGTATTTCC	GGCGTTCACCGAATACACGGAACGCATTAACC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GATGAGTGAGGATCAGTGACACTCACTGAGGG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CGAGATGCGTATTTTGACGGTGCGTCGGCCGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AAAGCGTCCACAGGGATGACGCGCACCTGGCG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CAAAGCCGCCGACCCTGCCGCCTACATTGCCG
CTCTTCTTCGCGTGCGCGGAGGTATTTCC	GAAGCCCGTGAATGGCTCACCATCTGCGTGGA
CTTTTCTCCGCGTGCGCGGAGGTATTTCC	GCTCCAAGGCTCGCCCGTCTTCCGCTGCGCTC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	ATTACCGAAGCCGTCATTAAAGGCATCGTTGA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	AACGTGATCGAGGTGGTCACAATTGAGGACGA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	CAGAGTGTGATCTCGACGAGCTTGCCGTGCCG
CTCTTCTCCGCGCACGCGGAGGTACTTCC	GACCGAGACCCACGTATCGTGGGCAAACAGAT
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GAGTTTGGCTGAAGTGCGGTAATGTCCGGCAG
CTCTTCTCTGCGTGCACGGAGGTATTTCC	CCAGCCACCGCAAGATACGACCATTGCCGGTC
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GGGTGTTGAGCTCGACCCGACTACCGCTCAGA
TTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCCATCCTCGCGCAGCCCGTACTTGCCAATG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	GTAACCGATCACGTTGCCAGCCTGGACGGGTG
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TCGCCATCAAGAAGACAGCTGACCGTGATTCA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TCGCCATCAAGAAGACAGCTGACCGTGATTCA
CTCTTCTCCGCGTGCGCGGAGGTATTTCC	TTCTCACTCTGGTGGGAGGTGCGGCGGTAGCT
CTCTTCTCCGCGTGCGCGGAGGTATTTCCGTGGGAGGCCGCGAAAGCTGCGTACGTGATCCCTCTTCTCCGCGTGCGCGGAGGTATTTCCTACGCCGCCCCAGCGGGCACCCCGGTACTTGCCTCTTCTCCGCGCGCGGAGGTATTTCCCATGCCTGAGGCAGATCGCCACGAGAGTTCACCTCTTCTCCGCATGCGCGGAGGTATTCCCGGAGAGCT	CGTCGACGGGAACCTGCACCTCAACTCT
TCTCCGCGTGCGCGTAGGTATTTCCAGTGTAGCGACG	CAGCGCCTGCACTACAGGTGCTCT
TCTCCGCGTGCGCGGAGGTATTTCCGGGGTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049863.1\|WP_166291893.1\|2427862_2428516_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|187858
NZ_CP049863.1\|WP_166291867.1\|2422322_2423618_-\|isochorismate-synthase	unknown	unknown	gnl\|CDD\|224091
NZ_CP049863.1\|WP_166291909.1\|2431209_2432139_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP049863.1\|WP_166291877.1\|2426022_2427117_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP049863.1\|WP_166291870.1\|2423821_2425384_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cls000721_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP049863.1\|WP_166291921.1\|2441900_2442869_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027
NZ_CP049863.1\|WP_166291917.1\|2438254_2438611_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049863.1\|WP_166293130.1\|2443820_2444807_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049863.1\|WP_166293128.1\|2439273_2439675_+\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	unknown	unknown	gnl\|CDD\|179603
NZ_CP049863.1\|WP_166291911.1\|2432135_2432474_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_CP049863.1\|WP_166293129.1\|2439674_2441816_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236179
NZ_CP049863.1\|WP_166291906.1\|2428546_2431213_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP049863.1\|WP_166293127.1\|2437746_2438193_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|376840
NZ_CP049863.1\|WP_166291865.1\|2421328_2422240_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049863.1\|WP_166291881.1\|2427113_2427863_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP049863.1\|WP_166291873.1\|2425423_2425987_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0096_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP049863.1\|WP_166291913.1\|2434942_2435152_-\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP049863.1\|WP_166293126.1\|2435552_2436503_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP049863.1\|WP_166291919.1\|2438861_2439098_+\|glutaredoxin-like-protein-NrdH	unknown	unknown	gnl\|CDD\|131249
NZ_CP049863.1\|WP_166291915.1\|2436511_2437738_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181738

Protein	Function_ID	Function_description	E-value
NZ_CP049863.1\|WP_166291893.1\|2427862_2428516_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	9.31023e-30
NZ_CP049863.1\|WP_166291867.1\|2422322_2423618_-\|isochorismate-synthase	gnl\|CDD\|224091	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.09364e-83
NZ_CP049863.1\|WP_166291909.1\|2431209_2432139_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.63082e-71
NZ_CP049863.1\|WP_166291877.1\|2426022_2427117_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	5.30819e-77
NZ_CP049863.1\|WP_166291870.1\|2423821_2425384_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	9.6175e-16
NZ_CP049863.1\|WP_166291921.1\|2441900_2442869_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_CP049863.1\|WP_166293128.1\|2439273_2439675_+\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	gnl\|CDD\|179603	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI.	4.62238e-79
NZ_CP049863.1\|WP_166291911.1\|2432135_2432474_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	3.59135e-26
NZ_CP049863.1\|WP_166293129.1\|2439674_2441816_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236179	PRK08188, PRK08188, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
NZ_CP049863.1\|WP_166291906.1\|2428546_2431213_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.73937e-46
NZ_CP049863.1\|WP_166293127.1\|2437746_2438193_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|376840	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase. This family of proteins are predicted to be SPOUT methyltransferases.	2.11547e-63
NZ_CP049863.1\|WP_166291881.1\|2427113_2427863_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.1783e-22
NZ_CP049863.1\|WP_166291873.1\|2425423_2425987_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	4.01764e-12
NZ_CP049863.1\|WP_166291913.1\|2434942_2435152_-\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.00114552
NZ_CP049863.1\|WP_166293126.1\|2435552_2436503_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.92639e-15
NZ_CP049863.1\|WP_166291919.1\|2438861_2439098_+\|glutaredoxin-like-protein-NrdH	gnl\|CDD\|131249	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.	7.72362e-33
NZ_CP049863.1\|WP_166291915.1\|2436511_2437738_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181738	PRK09265, PRK09265, aminotransferase AlaT; Validated.	0

>NZ_CP049863.1|WP_166291911.1|2432135_2432474_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MIAVLVAKAVPEHLRGYFGRFLTEVVPGVFAGRTSRVVAERLWKRASEVLVTGNMALVVTDNTLEQGYSFLTAGPNPPAVVDLDGLQLIAHLYRPSDSQDSVNLGENALSPG
>NZ_CP049863.1|WP_166291909.1|2431209_2432139_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MSYSDNAIAFSTLPVSHQVRFEDRVSFAYIEKAVVLQNRTGVWAMQEEADELVQLQIQLPVGGIAVLALGPGTSITHPAMMSLTRSGATVVFAGGGGNNAYAAATPLTSSSRWALAQAHLVTREEETKQAAIVLYKQQLGLDVLPGGSINTMRGLEGRAIRDLYKKLAKQHGIKSFRREVAAEDPVNTGLNLGNSILYGCAAAACSAIGVNPALGIIHRGNRRSLLFDLADLYKPKITIPAAFASAAEEDSAGAVRRLVRKAIHKQKVMAGMVETLMTVLSPHLPGQDDDRLVGDESEIQGHTNYGGDE
>NZ_CP049863.1|WP_166291906.1|2428546_2431213_+|CRISPR-associated-helicase-Cas3'
MLWSKSQGLDEKYPLLSHQLDTAASAQALWDRWLRPDLCKLLEATLGPEARSWFAYVAGQHDTGKANPVFQLQLSSNRSEPWSTTFRQRLEQEGFGCSVPLEREERLRRHERVSALELASADIKDGGEIASNWISLTALGHHGKFQTPGTKSDRNAFRDHAGGRWKVERAQNTRVLREVCGLLPDTDPPPIGGVAATLLAGLVILADRTASEIASVTQAQARMRAGALRLNDPAGWISQQRDYFASRLEETLGIYQNFSDPAAARTAIVGDFELRPLQEAALKCGDGLWFAMAPTGSGKTEAALLRHSTCNERLIFALPTQATTNAMMKRIQYVFAGGSNVAELAHRLASIEDFYARSSEEVAATDDISAGTGTAGMASGLVPSEFLRNGTARLLAPVSVSTIDQVLAGSLRTKWAHLRLLTLANAHVVLDEAHLMDYYQSALAEQLMQWWGATGTRVTILTATLPTWQRDLFAQAYLAGARAAGLTSEGAKELPQILFPSHHELPGEAKLLQQQSYTIDLDLSEASEALGDSREAVSDIHMQWVLEHRTRFPFARLGVIANTVDRVQLIANSLREQDIPVTVLHSRMTAGHRRDATNALLGTLGPLAEANEQTLPQVLVGSQAVEASLDIDLDALSSDVAPAASLIQRAGRVWRHRSLQHVQRRRRRIPGKANLPIHLVYAEGVGPSLPYFASEMTRVREYLRYKRSLVMPDESQSFVDGTAVTLGDVSEENLRELANISREVITSQGIKISVADLQYEGVDFLDFSKLTGEDVEEESCTRLIDQPSITAIVIDEDGAAGVPGAWHGSLHELEEIDATDHARIRLAMEASVPLSGKIARAVISSYDGGERWCHLPKSRVISSMWPVVLSSSPITYDPLLGVRLKDTK
>NZ_CP049863.1|WP_166291893.1|2427862_2428516_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MPVSQFLSRVPLHALSAKSGARTRRHITDNPAQQHSEVMSLFGHIEGDTVRADTNVLFRVDPPHGNQAATVLIRSSIVPSRPAEGLETRQEGPVPPAGTPVAFRIAINAIRRRSVESSTAKRKTILTPVPRDDDPAPDGTTMTDWLSARLAGGLSSVEILNHDRQVLGVGTKCTVQTDLVDGFAIVEDSAKLAQMLIHGVGRAKSYGCGLLSLRPLS
>NZ_CP049863.1|WP_166291881.1|2427113_2427863_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSALYLRFAGALQSWAGPRIAGNHVHTALIPTRSGTLGVLAAALGAPQGEWPEWLHQTALDVRVESAGTVQRDYQTINPRGENQRFAERIWIASGLKRSAPSSFTPDAEKGTSIVIRSYLAGAEFLVRVVHSDRLDEIASACAGPRFSPYLGRKAFAPSFPFLLGKGPAELLMSAPTVLGGARVPGQRAIAIHSLTGEDEDAPRNSITVETASLEERLTWWRKEARLPQRTVSLANDSLNKFATRKGEI
>NZ_CP049863.1|WP_166291877.1|2426022_2427117_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MNNLTLHFINTIPWSNLNRDDTGTPKRAVIGGTLRAMLSSQSIKRAVRTDYELRSGDQSLRSTNLAGIIANRACEINVELDPKKALKDSEKLISALVKKEKTARPAVDESESKEPGISSWLSAEEIETAAAAVAEDRLMVKAQGKEKLTEFVEPGKTGSLSIAAFGRMFALAPEANTHAAVAVSPAIAVHKTIIETDYFSTVDDDPKASHAGASYLGLASYTSGVFYRSITIDRAQLRRAWTGHDSENAREQLSLMVYSLVYGLPSGKKNVTAPYVQPLLVLSEEQAHRVAYDFETPVLAEADGGYGEQAVKTIAQQVEAARAFDAANFGRSAVAGTSAARLEIAAEQVDLDRLVANAVDWILA
>NZ_CP049863.1|WP_166291873.1|2425423_2425987_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSESVNSLHMLVGEVLRRRETDSRFRANVSRGLNPLTEQYAYPWVLPHVPSPYEQVVYLRVAGLVASYPNIPHSDKPTLGQSFRVLSEQRSGKRVDDETYQKHDAIAARLVSLQDQDLDGAVDTLRRLFDLNKKVQVPVNYFALARMLSRWGSGQSEASLAVRRRTLGDYYGAWSIKSFAPIESVDD
>NZ_CP049863.1|WP_166291870.1|2423821_2425384_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MSQRSENQHQSVNVLKDVAWIRLFEDAADGSTSTRCVTVREALLQAHIFKGIDTSLNGVQFGAISRFLFSVAAIVIRNQDPRRPFSKFRAMKFSEAAIDAAINQLSEYADLFHPEKPFLQIAADLEIPVTSSVKKLLPYMPPDRAEEFWSSSEQPRSLDLPEAVLALAINSYYSFGGNNRLDGRACVNGSPGIRYPGKDFTATEVLWHGGSLFDFICFNVPKSWVEGTGLPAWADPLGATALKDQKIAEHPLWRATWGSNTARCQWRDFQMVAAAVGGSPYRPPLMGTEKHEAKKWWDLRNTYDPFYLYLPVKDTSGGKGASPMEVKAQRLDFGYGATQLEAEWHAKNLSAALRNHSQGRIMVDEEAPLVFLRHLVQGSASSPVVRRSEILVSARSRWQISESRADAVSEASTKVKLVMIELGKPFSKKGRLAAIANRRGDVEAEFWAEVRVPFAHYIVNGSNDVSIDPNVWAEVREAALKAFDTVAQSVPHSKIAPALSIARNRVGHNIARLLNLAENS
>NZ_CP049863.1|WP_166291867.1|2422322_2423618_-|isochorismate-synthase
MRVPINPAVPVLRAVTGPLAGTPDLVSLADPSEPLLWIRGDRGCVGIGEALRLTFTGPNRFAEAANTWRAIAKNAQIDDPVQMPGTGLVALGTFAFADHSEAESVLIVPRFLVAQHREAAWITEINEITNSTQAAEAASQEAPAIPTPKPQNPWHATTFEAATDTVNQYLEGVRKATETIDRGEAEKIVLARQITGTLADDADLRTPLKRLADRYLDCWTFAVDGLIGASPETLIRTTDGAVSARVLAGTRGRHPESDKRDAQARDELLTSAKEQHEHAFAVQSVVTALSPHVNELRTSEAPFPLQLPNVWHLATDLGATLKEQSSSLELVDAIHPSAAIAGTPTATAVAAINTLEPFDRGRYSGAVGWIDADGDGEWVIALRCAQVEKAEGGQRRIIASAGGGIVAGSDPEHELGETVSKFRPITEAFGA
>NZ_CP049863.1|WP_166291865.1|2421328_2422240_+|hypothetical-protein
MPYQNAIEEGSLRIKDPEASADKSALTYDEIVAACMKEEGFEYWPTSEPDEDVTGSEAIDDDKELSKRARDGYGIVLPYDKLYKASSQSLGPNEEYFSMMSDEMREEYTRVLSGTIWDELSAASQTGEEVDWDWRRGGCDGKATHLIEERASQGEQAENAQTTQFDDLIDQMNALPEQIPQDKDWEKVLERWSQCMSSGGFDFSSWDQAQDSIVEEFDTLASEASMDKIAEEGSSADPYKPDKGAYEKLYDREREIAVADWQCQIDTGRAEAERRILYGIEKDFVDTHFESLERMKKWFDAKG
>NZ_CP049863.1|WP_166291913.1|2434942_2435152_-|MHS-family-MFS-transporter
MQLRAALSGDSDSAFERFDFAIYCALSATNFPQLFFSGRREAGGLSISTPLSRAQIRDQISYLRSRGAT
>NZ_CP049863.1|WP_166293126.1|2435552_2436503_+|GNAT-family-N-acetyltransferase
MERAVQRQSGPRCDHVCLRSDHSNDVLDLGCARARKRPRAPLASTGGLNTSVRLPGATLAAKPSHSPINRPLLGNRNPHLRRRIRPALSACELRTPRPPRFGTNPNPLLLHSNRRYPRRVLPLYDPWRIDPRTPPQPRAQIPPLPIGHTTPHQTERLTLHAISAEEAARIIARSPIPEDNWASDYPLEDEIDPLKGLIKRTKTGYEPHPFTMYRISERATGQAIGGLGFFGPPDEYGHVEVGFGLVESARNKGYATEALQAAVEIASAEGAYAILADTTESNRASQGVLRKSGLAETHRDAGTIYFKRILNPDPMP
>NZ_CP049863.1|WP_166291915.1|2436511_2437738_+|pyridoxal-phosphate-dependent-aminotransferase
MRLITQSRKLSGVRYDVRGPILQEAERLEREGHEILKLNIGNPAPFGFEAPAEIREAVACALATAQGYSDSRGILQAREAVAQYYAAKGIAGVTSNDILIGNGVSELISLVLQALVDDGDEILVPSPDYPLWTAQVTLSGGRAVHYPCDESNGWMPDLDATEALVTPRTKGIVLINPNNPTGAVYSTELVRGFAKLAEKHGLVLMSDEIYEKILYDGATHEHAAAHTTETLCLTFSGLSKAQRVAGYRAGWLAISGNRDRATDFLEGLTLLANMRMCSNVPAQHAIPVALAAATNGSGIGELCAPGGRLREQRDAAHRLLSAIPGVTCELPGGAMYLFPRLEPEQYPIDDDQAFVIDLLRATRVLVTNGRGFNLATPDHLRFVTLPTVPVLTEAIGRIAEYLDGVRVS
>NZ_CP049863.1|WP_166293127.1|2437746_2438193_+|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MLAVGKKHESWVTEGIARYEKRLRKPFDVSWQLLPHSAREGDAARSEESERILAKLDRGAFVVLLDERGRNVDSPALAATLQGAFDAGRAVVVIIGGAYGAEDRVRDRADFVWSLSKLVFPHQLVRLILAEQLYRAQEISGGRPYHHV
>NZ_CP049863.1|WP_166291917.1|2438254_2438611_+|hypothetical-protein
MNPFRLTSRVQAAPRVSPQAQVPASEAVAVPWQVVTRSRSGVIEVEHCGSTPLHSVRFALAGKGMLGLSLPRTVYPGQRVRVVLRGSHAEGTMEAADAMLMMRWFQVDGTEMLWPIAL
>NZ_CP049863.1|WP_166291919.1|2438861_2439098_+|glutaredoxin-like-protein-NrdH
MAITVYTKPSCVQCTATYRALDSKGIEYNVLDLSEDETALQAVKELGYLQAPVVVTEDEHWSGFRPDKISELASRLAD
>NZ_CP049863.1|WP_166293128.1|2439273_2439675_+|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI
MPDLVYFSSVSENTRRFVEKLGRPALRIPLYASDDPLVVTEPFVLLVPTYGGGPALRAVPKQVIRFLNDERNRKLIRGVIATGNTNFGAAYGIAGDIIAQKCKVPHLYRLELFGTPDDVTAVQEGLDKFWKQQ
>NZ_CP049863.1|WP_166293129.1|2439674_2441816_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MEPGLDSSKISEMDFHSLNAMLNLYDANGKIQFDKDREAARQYFLQHVNQNMVFFHNFEERMRYLIDNDYYEKELLEQYPEKFVEDLTDEAYKMKFRFPTFLGAFKFFTSYALKTFDGKRYLERFEDRVVMVALGLAQGDQDLARGLTREIISGRFQPATPTFLNLGKAQRGELVSCFLLRIEDNMESISRGINSSLQLSKRGGGVALSLSNIRESGAPIKKIENQSSGIIPVMKLLEDSFSYANQLGARQGAGAVYLSAHHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDITFDLARKGEDMYLFSPYDVEKVYGVPFGDISVSEKYHEMVDDARISKTKINARHFFQTIAELQFESGYPYIVFEDTVNKANPIKGRINMSNLCSEILQVNTPTTYNEDLSYKEIGKDISCNLGSMNIAMMMDGGDFGGSVDLAIRALTAVSDMSHISSVRSIEDGNDKSHAIGLGQMNLHGYLARERVHYGSEEGIDFTNIYFYTVLFHAIQASNKIAIERKVTFGGFEDSQYASGEFFNKYTDQVWEPATARVREIFAEAGVKIPTQEDWTGLKASVMQHGIYNQNLQAVPPTGSISYINNSTSSIHPIASKIEIRKEGKLGRVYYPAPFLTNDNLEYYEDAYEIGPEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQIYAWRKGIKTIYYIRLRQLALEGTDMEECVSCML
>NZ_CP049863.1|WP_166291921.1|2441900_2442869_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MNFKLGHAVQAINWNRIQDEKDLEVWNRLVNNFWVPEKVPLSNDVQSWATLTPEEQLLTMRVFTGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTTEIDDAFRWSMENPNLQKKAQIIVNYYEGEDPLKRKIASTLLESFLFYSGFYLPMYWSAHAKLTNTADLIRLIIRDEAVHGYYIGYKFQKGLENETEERRQELKDYTFSLLYELYENEVLYTQDLYDNVGLTEDVKKFLHYNANKALMNLGYEPMFPKEMTDVNPAILSSLSPNADENHDFFSGSGSSYVIGKAVATEDEDWDF
>NZ_CP049863.1|WP_166293130.1|2443820_2444807_+|hypothetical-protein
MKYAYENLSADQFETLVTLICQELLGISVQGFARGPDGGRDARFEGTAQLHPSAAAPWKGRVIIQAKHTNGLNKSFTESDFYSSGSTTTVLAEEFPRIASLKKRGELDHYMLFSNRRLTGNGESEIRNALSETCGVPTASIYLCGIEQIELWLKRFSEIPNIAGIDPIDSPLIVSPEDIAEIVSAFAERRDGMFTILDDPPVARVDLATKDRLNGMSDDYSKALRRKYLKDTEQIRTFLAAPENDELLQAYEAAVDEFELRIIAHRKNYQSFDQVMDYLIDLLFERDPILRQRQHKRLTRALLFYMYWNCDIGTKEDDHAPTHEALAS

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Crispr_ID: NZ_CP049863_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049863_3

3001485-3001567

Orphan

Consensus_repeat	Method
CCGCGTCCGGGTAACAACCCCTTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049863_3

>merge|NZ_CP049863|3|3001485-3001567|CRISPRCasFinder
CCGCGTCCGGGTAACAACCCCTTCGCGTCAAGCCAGGGCATGGGCATTCCCCGTCCGCCGCGTCCGGGTAATAACCCCTTCGC

>NZ_CP049863|3|3|3001485-3001567|CRISPRCasFinder
CCGCGTCCGGGTAACAACCCCTTCGC	GTCAAGCCAGGGCATGGGCATTCCCCGTCCG
CCGCGTCCGGGTAATAACCCCTTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049863.1\|WP_166292353.1\|3006957_3007881_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP049863.1\|WP_166292345.1\|2999606_3000602_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|237061
NZ_CP049863.1\|WP_166292355.1\|3009780_3010731_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP049863.1\|WP_166293173.1\|3007953_3008889_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235113
NZ_CP049863.1\|WP_166292348.1\|3004324_3005116_-\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|377540
NZ_CP049863.1\|WP_166292346.1\|3000677_3000935_+\|YlxR-family-protein	unknown	unknown	gnl\|CDD\|377288
NZ_CP049863.1\|WP_166292354.1\|3008885_3009242_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049863.1\|WP_166293174.1\|3009326_3009794_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049863.1\|WP_166292350.1\|3005643_3006087_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP049863.1\|WP_166292338.1\|2990747_2991455_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP049863.1\|WP_166292342.1\|2998262_2998469_-\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|238219
NZ_CP049863.1\|WP_166292340.1\|2994950_2997260_-\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP049863.1\|WP_166292344.1\|2999012_2999498_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227027
NZ_CP049863.1\|WP_166292352.1\|3006567_3006957_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049863.1\|WP_166293172.1\|2991464_2992910_-\|phospholipid-carrier-dependent-glycosyltransferase	unknown	unknown	gnl\|CDD\|224839
NZ_CP049863.1\|WP_166292343.1\|2998500_2998794_-\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376835
NZ_CP049863.1\|WP_166292351.1\|3006124_3006571_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP049863.1\|WP_166292349.1\|3005225_3005633_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
NZ_CP049863.1\|WP_166292341.1\|2997265_2998222_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049863.1\|WP_166292339.1\|2993015_2994782_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405

Protein	Function_ID	Function_description	E-value
NZ_CP049863.1\|WP_166292353.1\|3006957_3007881_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	6.27756e-86
NZ_CP049863.1\|WP_166292345.1\|2999606_3000602_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	1.00179e-154
NZ_CP049863.1\|WP_166292355.1\|3009780_3010731_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.36428e-121
NZ_CP049863.1\|WP_166293173.1\|3007953_3008889_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	7.70138e-122
NZ_CP049863.1\|WP_166292339.1\|2993015_2994782_+\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_CP049863.1\|WP_166292348.1\|3004324_3005116_-\|DUF805-domain-containing-protein	gnl\|CDD\|377540	pfam05656, DUF805, Protein of unknown function (DUF805). This family consists of several bacterial proteins of unknown function.	3.39465e-23
NZ_CP049863.1\|WP_166292346.1\|3000677_3000935_+\|YlxR-family-protein	gnl\|CDD\|377288	pfam04296, DUF448, Protein of unknown function (DUF448).	5.37528e-22
NZ_CP049863.1\|WP_166292350.1\|3005643_3006087_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	8.50627e-28
NZ_CP049863.1\|WP_166292338.1\|2990747_2991455_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.05111e-59
NZ_CP049863.1\|WP_166292342.1\|2998262_2998469_-\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|238219	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.	1.39028e-14
NZ_CP049863.1\|WP_166292340.1\|2994950_2997260_-\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP049863.1\|WP_166292344.1\|2999012_2999498_+\|hypothetical-protein	gnl\|CDD\|227027	COG4682, COG4682, Predicted membrane protein [Function unknown].	1.41254e-42
NZ_CP049863.1\|WP_166293172.1\|2991464_2992910_-\|phospholipid-carrier-dependent-glycosyltransferase	gnl\|CDD\|224839	COG1928, PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].	6.62577e-24
NZ_CP049863.1\|WP_166292343.1\|2998500_2998794_-\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|376835	pfam02583, Trns_repr_metal, Metal-sensitive transcriptional repressor. This is a family of metal-sensitive repressors, involved in resistance to metal ions. Members of this family bind copper, nickel or cobalt ions via conserved cysteine and histidine residues. In the absence of metal ions, these proteins bind to promoter regions and repress transcription. When bound to metal ions they are unable to bind DNA, leading to transcriptional derepression.	2.63881e-31
NZ_CP049863.1\|WP_166292351.1\|3006124_3006571_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.63921e-48
NZ_CP049863.1\|WP_166292349.1\|3005225_3005633_-\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	5.8983e-39

>NZ_CP049863.1|WP_166292346.1|3000677_3000935_+|YlxR-family-protein
MVPVRTCVACRKRAPRADLLRVVLSDGRLIADDRAVLPGRGAWVHPSARCLELAVTRGMLSRALRASGKPDASPLENRLKTLMDN
>NZ_CP049863.1|WP_166292345.1|2999606_3000602_+|transcription-termination/antitermination-protein-NusA
MKIDLAMLRGLEREKDIPFEELAEIIEQAIQSAYLRHAENQGIPVPDEHQVKVQLDRKNGEITVLVPELGDEGQVVGEAHVMTDEFGRVASSAAKQVINQRLRDLSDDAVLGAFKDKEGQIVSGVVQQGPNPRMVQIDLGELEAILPPEEQIAGEAYPHGMRLRVYVTSVSKGLKGPQVVVSRTHPGLVRKLFEREVPELSEGLVEIVSLAREAGHRTKVAVRAKKAGINAKGTCIGEMGSRVRAVMAELGEEKIDIVDYSPELPTFVANALSPAKVTDVFMLNESLKQVRALVPDFQLSLAIGKEGQNARLAAKLTGAKIDIQPDSIMND
>NZ_CP049863.1|WP_166292344.1|2999012_2999498_+|hypothetical-protein
MVETQENASKPTPAFIGASWIALALGMGTYLIGLSNAGMELNEKGYYLTLLLFGLFAAVSLQKTVRDRADGIAVTNLYYGIAWFALVASLSLLAIGLWNAGSLSLSEKGFYGISFAMSLFASVAVQKNVRDLARFKGEEEAEEPAAYRAETVQNFLPAPAV
>NZ_CP049863.1|WP_166292343.1|2998500_2998794_-|metal-sensitive-transcriptional-regulator
MNTPDHGYMQNKAKYLTRLRLIEGQVRGLQRMVEEDQYCIDILTQVSATSKALKSVSLKILDEHLGHCVANAAITGGAVAEEKLEEASDAIARLVRS
>NZ_CP049863.1|WP_166292342.1|2998262_2998469_-|heavy-metal-associated-domain-containing-protein
MALTTNFTVTGMTCGHCVLSVTEEVSEVAGVTDVEVDLASGNLAVTSNDPVDAEKIREAVEEAGYQVA
>NZ_CP049863.1|WP_166292341.1|2997265_2998222_-|hypothetical-protein
MNTALKLGGFVAVLAVILAGAFGIGNAVGPIGGTDMKTTTGHGTETGTQESTTASNLPAGLQVSEQGYTLELDDPILSSGATEVSFRVTGPDGKPVTRFETSHDKDLHFIAVRRDTSGFQHVHPTMSTDGTWSTSLNLTPGTWRFFADFVPQGGESSITLGIDAFVAGDYAPQPLPSQKRTTTVDGYTVALDGNLTPGETSELTLTVERNGKPITDIEPYLAAYGHLVALRVGDLGYLHVHPDGEPGDGVTNPGPHITFMTTAPTAGSYRLFLDFKHDGVVRTAEFTVHTSGGHTGDSHAGEMNSTDDAAPAAHEEGH
>NZ_CP049863.1|WP_166292340.1|2994950_2997260_-|copper-translocating-P-type-ATPase
MATLNETQLPDAADQQVELAISGMTCASCANRIERKLNKLEGVTATVNYATEKAKVSFAPEVDTAALLEAVEQAGYSAELPKPKKSKGNDPEQIAAAEDAEREAAEAPVRELRNRLIVSAILTVPVIAMAMIPALQFTYWQWLSLALAAPVIVWAGLPFHKAAWTNLKHATATMDTLISMGTLAAMAWSLYALFFGTAGVPGMTHAFEFTISRGDGAGNIYLEVGAGVITFILLGRYFEARSKRQAGAALRALLELGAKEVSVLRNGVEERISTDDLVVGDRFVVRPGEKIATDGTIVKGASAVDASMVTGESVPVEVGIGDTVVGATINAGGRLVVEATRIGADTQLAQMAKLVEDAQNGKAQAQRLADKISGIFVPIVIGLAVATFGFWAGTGGGITGAFTAAVAVLIIACPCALGLATPTALMVGTGRGAQLGILIKGPEVLETTRRIDTVVLDKTGTVTTGKMTLTEVIVADGEHEEDVLRYAGALEDASEHPIAQAIAAGATARVGELPPVENFANVEGLGVQGTVSYEGDSHVTLVGRPQLLADWSLPLTPALESAMAAASKRGQTSVAVGWDGKARGVLVVADAIKETSAEAISGLRALGLTPVLLTGDNAAVATTVAEAVGIDAGPDTVIAEVMPADKVEVVKRLQAQGKSVAMIGDGVNDAAALAQADLGLAMGTGTDVAIEASDITLVRGDLRAAVDAIRLSRRTLGTIKTNLFWAFAYNVAAIPLAAAGLLNPMFAGAAMAFSSVFVVSNSLRLRGFK
>NZ_CP049863.1|WP_166292339.1|2993015_2994782_+|proline--tRNA-ligase
MITRLSNYFLKTLREDPADAEVMSHKLLVRAGYIRRQAPGVFGWMPLGLKVKGKLEQIIREEMLAAGAHEVHFPGLLPREPYEATGRWEEYGDALFRLKDRHGADYLLAPTHEEAFTLMVKDIVTSYKDLPLALFQIQDKYRDEARPRAGLLRGREFTMKDAYTFDATDAGLDAAYQKQRDAYERIFTRLGLEYVIVSADAGAMGGSRSEEFLLPTPIGEDTFVRSAGGYAANVEAYVTPAPEALPIEDQPAPAELDPAVTPTIETLVDHLNSEMPREDGRTWTAADTLKNIVLAVTPVGGEREIVVVAIPGDRDVDMKRAEVAFPGCEVEPATAADLEKNPLLVRGYIGPGIAGAAVLGLEGSTGLRYLLDPRIVPGTSWVTGANKELTHVANLVAGRDFAGDGTADIANVRDGDPAPDGSGPIETARGMEIGHVFQLGRKYAEALGLKVLDENGKLVTVTMGSYGIGVTRIMAILAELHHDDRGLIWPAAVAPFNVHVVATGKDPVVYEVAEPLVAQLDAAGIEVLFDDRPKVSPGVKFGDAELLGVPRVVVVGRDAAEGFVEVWDRAAGTKDRVAIADVPALLGV
>NZ_CP049863.1|WP_166293172.1|2991464_2992910_-|phospholipid-carrier-dependent-glycosyltransferase
MLGIAAVLRFWALGQPGTLVFDEIYYVRDAISQLAHGYPTTWPNDDPALPNPLGFTDTASYAVHPPLGKWILGLGILLFGPDNGWGWRSALALAGVATVGITMRLAWLISRRMVIACLAGLFLAIDGVHIVLTRVALLDGFLTLFIALGALLLWRDHLSVTARVEAIVKRPPRWFRPWLLAAGLTFGAAAAIKWSGLYPLAFFMVFTAVRDLMLLRRFGRSWVISVLRAGLTAATALPAALFAYLASWSGWIFTTGGWGRKPGEFWLTSLIQYHLDMFKWHSTLTAPHPYQADALTWPLALRPTAMYELNWDKGCAGGCTAGISALPNILVTWGGVAALLVLLWLVLRSFASHPSQRLVTSLATASSFVLLGYLSGWLPWVLTLSRSAVFQFYAVTLTPFSAIALALVLGMLCGIPIGNAPARVPGLRLSLDREAVRGRRMAVAMFVAAALVLAILFFPVWSGMPVADWFWQAHMWLPGWD
>NZ_CP049863.1|WP_166292338.1|2990747_2991455_+|response-regulator-transcription-factor
MSEPDRSRTSGAAGEESRPIRVVIVDDHQIFRTGLRTELGAELDVVGEAATVDEAVAVIPNLKPDVVLLDVHLPGGKGGGGAEVLRAVAERPDAKATQFLALSVSDAADDVVSVIRAGARGYLTKTSSGQEVTAAVLRVHGGDAVFSPRLAGFVLDAFGAGTGETADADDELDRLSTREQEVMRMIARGYAYKEVAAELFLSVKTVETHVSNVLRKLQLSNRHELTAWALSRRLL
>NZ_CP049863.1|WP_166292348.1|3004324_3005116_-|DUF805-domain-containing-protein
MSTPFNPEEQPQQPQQPIQPSQPPAPQQPAPQQPAQQQPPAQQQPPQYAPPPQPQPQPNYQAPQYTTPQYAPPQYQAQQPYAAAPSYAQYAVPGVPGPGEPFDGATSPDDLTRPLYGATFSQAIRRFFKNYVNFTGRASRSEFWWVELFLALVSLVPMVFYIIGLITITVSSSSYDSSYGYSSGSSAGVGAGALFLGLGGILLLVIGLGTLLPYLGIMWRRLHDINFAGPFYFLTFIPYVGGLIVLIFTILSSKPEGRRFDRR
>NZ_CP049863.1|WP_166292349.1|3005225_3005633_-|VOC-family-protein
MKINIHVTFLPHTDPEASLAFYRDVLGFEVRKDVGYEAMRWITVGPANQPETSIVLSPPAVDPGLSDEERRVIGELVAKGSYASIVFATDALQELFEKVEGSGADILQEPMDQDWGSRDFAFRDPAGNTVRVQQL
>NZ_CP049863.1|WP_166292350.1|3005643_3006087_-|helix-turn-helix-transcriptional-regulator
MTDNTANEKRLSELRLLRKVRDRIDREYARPLDVDALARGAHVSAGHLSREFRAAYGESPYSYLMTRRIERAMTLLRRGNLSVTEVCFAVGYGSLGTFSTRFSELVGMSPRAYRQAAASGIDELPSCVVSRALKPVRNREVSSGHDE
>NZ_CP049863.1|WP_166292351.1|3006124_3006571_+|30S-ribosome-binding-factor-RbfA
MSNPRAGKVAERIQQIIARRLEKGLRDPRLGFVTITDVRVTGDIQHASVFYTVYGNEEEQADSAAALKAATGMLRSEVGKQLGTRLTPTLEFIHDELPESAQHLNDLLAEAKQRDEAAQALAANAQYAGEKDPYGKLADVESEEEEEK
>NZ_CP049863.1|WP_166292352.1|3006567_3006957_+|hypothetical-protein
MKNLRTTAVTSAVGAALLLGLTLTGCAAGSNPDVPKGVPTAVATVQGEVSNKASSSPTNWSYSVEVDSKKAQDEAITKLKDNGFKVTGDNEQNGTRTYALTNDKEKVNVTVVLTKQDKKFLVIYNIAKL
>NZ_CP049863.1|WP_166292353.1|3006957_3007881_-|A/G-specific-adenine-glycosylase
MPSVPAPAASTPDRFEIAKALNDWFAHAARDLPWRAEGTSAWAVLVSEFMLQQTQVDRVIPRWTTWLERWPTPSALAAEEPGEAVRAWDRLGYPRRALWLHRAAVEIATEHGDVVPRDVEQLLALTGVGPYTARAIATFAYGEHHPVVDTNTRRVLARAVHGIAAAGMPKPSDLDDMAALLPADPTEAAVFNAAAMELGAIVCTARAPLCDACPIAAWCEWRGAGYPDNAPEKRPKQAKFEGSDRQARGRIMALLRRSAEPVSRETALGAARGPDPQPRDATQPQRAYDSLLADGLIVELEGRARLP
>NZ_CP049863.1|WP_166293173.1|3007953_3008889_+|tRNA-pseudouridine(55)-synthase-TruB
MPPQGGILLIDKEEGWTSHDVVARSRRALGIRKVGHAGTLDPMATGLLVLGAGPATRLLTHLVGLDKTYTTTIRLGTATVTDDREGDRISAAEHSAVEALAADPARISAAVAELTGPIEQAPSAVSAIKVDGKRAYDRVRAGEAVELKKRPVTIHSFEIGEPRLAEEDDGTRVIDIEATVRCSTGTYIRALARDLGEKLGVGGHLVALRRSAVGPFDVADAASMEALVGESALTLLSPTAVAERLFPLLPLTEQQAVDIGHGKRIEVGSANDAALVAAVAPGDRLIGLLEVKNGRTRVVTNFPTPDGQAAA
>NZ_CP049863.1|WP_166292354.1|3008885_3009242_+|hypothetical-protein
MILWFGIVIIAVALLSAIVCAVAAVRKIAPNDYTLGATVLVALLLVAQLIIAIVAPLTGNNAVGDPLEFWLYLIVVFVLPLGAGFWALMDRTRWANLVLAVVHLSIAVMVYRMMVIWG
>NZ_CP049863.1|WP_166293174.1|3009326_3009794_+|hypothetical-protein
MSSSAPQQAAQRADRLSGLGRVLITVYVVLALAATFRSLYQIIAKFDEAPLAYSLSAVSGLVYIVATIALIKRRGVWRGIAWGALIFELCGVVIVGTLSLVVPQFFAHPSVWSQFGSGYVFIPLVLPVLGLIWLKRDGDAARAAAETSGEHDASI
>NZ_CP049863.1|WP_166292355.1|3009780_3010731_+|bifunctional-riboflavin-kinase/FAD-synthetase
MRVFESLAAIPEADFAAGSAVAIGKFDGVHLGHQAILARLIEAARGDNSHSVVFTFANNPLSYLRPEVCPLPLMSREQRIEALSDAGVENCVMVEFDEAFSQIPAEEFVEKILVGQLRARHIIMGSDFRFGHGGVGDAHLLRSLSTRLGFTVEVVAAVVDPQAGCVSSTRVREAILAGDAEAASSMIGRPVTVRGEVVHGDARGRDLGFPTANLGGRIEGLVPSDGVYAGFVRIDGAQLPAAISVGNNPTFTPDGQSRVEAFILDFDEDIYGSSIEVLFTHRIRSMERFDSLESLIEQMDADVVLTRRLTGADRAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP049863_2	2.21\|2433743\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433743-2433774	32	NZ_CP049863.1	22921-22952	0	1.0
NZ_CP049863_2	2.21\|2433743\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433743-2433774	32	NZ_CP049863.1	3671061-3671092	0	1.0
NZ_CP049863_2	2.32\|2434412\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434412-2434443	32	NZ_CP049863.1	3146617-3146648	2	0.938

1. spacer 2.21|2433743|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to position: 22921-22952, mismatch: 0, identity: 1.0

ttccatcctcgcgcagcccgtacttgccaatg	CRISPR spacer
ttccatcctcgcgcagcccgtacttgccaatg	Protospacer
********************************

2. spacer 2.21|2433743|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to position: 3671061-3671092, mismatch: 0, identity: 1.0

ttccatcctcgcgcagcccgtacttgccaatg	CRISPR spacer
ttccatcctcgcgcagcccgtacttgccaatg	Protospacer
********************************

3. spacer 2.32|2434412|32|NZ_CP049863|CRISPRCasFinder,CRT matches to position: 3146617-3146648, mismatch: 2, identity: 0.938

ctgttcttcgctaggctcgcctaccaacaaac	CRISPR spacer
ctgttcttcgctaggctcacccaccaacaaac	Protospacer
******************.**.**********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP049863_2	2.20\|2433682\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433682-2433713	32	NZ_CP046258	Gordonia sp. 135 plasmid pG135, complete sequence	135686-135717	2	0.938
NZ_CP049863_2	2.35\|2434302\|24\|NZ_CP049863\|PILER-CR	2434302-2434325	24	MK496050	Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence	492218-492241	3	0.875
NZ_CP049863_2	2.35\|2434302\|24\|NZ_CP049863\|PILER-CR	2434302-2434325	24	MN961670	Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence	5546-5569	3	0.875
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	KM659098	Sinorhizobium sp. LM21 plasmid pLM21S1, complete sequence	65980-66011	6	0.812
NZ_CP049863_2	2.30\|2434290\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434290-2434321	32	MK496050	Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence	492218-492249	6	0.812
NZ_CP049863_2	2.30\|2434290\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434290-2434321	32	MN961670	Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence	5538-5569	6	0.812
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	879914-879941	6	0.786
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	NZ_CP035502	Sphingosinicella sp. BN140058 plasmid p1, complete sequence	47770-47797	6	0.786
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	MN807247	Mycobacterium phage Chupacabra, complete genome	18223-18250	6	0.786
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	MF773750	Mycobacterium phage OKCentral2016, complete genome	17930-17957	6	0.786
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	JX307704	Mycobacterium virus Goose, complete genome	18224-18251	6	0.786
NZ_CP049863_2	2.1\|2432522\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432522-2432553	32	NZ_CP021021	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pE, complete sequence	9472-9503	7	0.781
NZ_CP049863_2	2.1\|2432522\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432522-2432553	32	NZ_CP021021	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pE, complete sequence	41805-41836	7	0.781
NZ_CP049863_2	2.1\|2432522\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432522-2432553	32	NZ_CP021004	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pE, complete sequence	23071-23102	7	0.781
NZ_CP049863_2	2.5\|2432766\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432766-2432797	32	NZ_CP021815	Sinorhizobium meliloti strain M270 plasmid accessoryA, complete sequence	93972-94003	7	0.781
NZ_CP049863_2	2.21\|2433743\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433743-2433774	32	NZ_CP017947	Bosea sp. Tri-49 plasmid unnamed1, complete sequence	211531-211562	7	0.781
NZ_CP049863_2	2.22\|2433804\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433804-2433835	32	NC_010335	Caulobacter sp. K31 plasmid pCAUL01, complete sequence	82864-82895	7	0.781
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	109127-109156	7	0.767
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	MN369761	Mycobacterium phage Malthus, complete genome	26466-26493	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	MK224497	Mycobacterium phage Henu3, complete genome	31611-31638	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	MN945904	Mycobacterium phage Eponine, complete genome	27307-27334	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	AP018469	Mycobacterium phage Y10 DNA, complete genome, note: sample1	26542-26569	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	AP018470	Mycobacterium phage Y2 DNA, complete genome	26542-26569	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	MT310882	Mycobacterium phage JF1, complete genome	26542-26569	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	AP018471	Mycobacterium phage Y10 DNA, complete genome, note: sample2	26542-26569	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	KX621007	Mycobacterium phage Taquito, complete genome	26992-27019	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	MH051258	Mycobacterium phage SamScheppers, complete genome	26945-26972	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	MF140435	Mycobacterium phage Wintermute, complete genome	26542-26569	7	0.75
NZ_CP049863_2	2.34\|2434237\|28\|NZ_CP049863\|PILER-CR	2434237-2434264	28	NC_027365	Mycobacterium virus Fionnbarth, complete genome	26543-26570	7	0.75
NZ_CP049863_3	3.1\|3001511\|31\|NZ_CP049863\|CRISPRCasFinder	3001511-3001541	31	NZ_CP016593	Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence	142392-142422	7	0.774
NZ_CP049863_3	3.1\|3001511\|31\|NZ_CP049863\|CRISPRCasFinder	3001511-3001541	31	NC_017386	Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence	77591-77621	7	0.774
NZ_CP049863_3	3.1\|3001511\|31\|NZ_CP049863\|CRISPRCasFinder	3001511-3001541	31	NC_014621	Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence	44292-44322	7	0.774
NZ_CP049863_3	3.1\|3001511\|31\|NZ_CP049863\|CRISPRCasFinder	3001511-3001541	31	NZ_CP012909	Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence	142398-142428	7	0.774
NZ_CP049863_2	2.1\|2432522\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432522-2432553	32	NC_017078	Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence	121658-121689	8	0.75
NZ_CP049863_2	2.2\|2432583\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432583-2432614	32	NZ_CP013108	Sinorhizobium americanum strain CFNEI 73 plasmid A, complete sequence	69763-69794	8	0.75
NZ_CP049863_2	2.3\|2432644\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432644-2432675	32	MG592626	Vibrio phage 1.262.O._10N.286.51.A9, partial genome	36647-36678	8	0.75
NZ_CP049863_2	2.5\|2432766\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432766-2432797	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	75543-75574	8	0.75
NZ_CP049863_2	2.5\|2432766\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432766-2432797	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	971677-971708	8	0.75
NZ_CP049863_2	2.5\|2432766\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432766-2432797	32	NZ_CP025549	Mycobacterium paragordonae strain 49061 plasmid unnamed3, complete sequence	24809-24840	8	0.75
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	434169-434200	8	0.75
NZ_CP049863_2	2.7\|2432888\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432888-2432919	32	KF147891	Pseudomonas phage PaBG, complete genome	50389-50420	8	0.75
NZ_CP049863_2	2.11\|2433133\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433133-2433164	32	NC_019957	Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence	80792-80823	8	0.75
NZ_CP049863_2	2.11\|2433133\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433133-2433164	32	NZ_CP041044	Paracoccus sp. AK26 plasmid pAK2, complete sequence	26689-26720	8	0.75
NZ_CP049863_2	2.13\|2433255\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433255-2433286	32	NC_010848	Flavobacterium sp. KI723T1 plasmid pOAD2 DNA, complete sequence	22182-22213	8	0.75
NZ_CP049863_2	2.13\|2433255\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433255-2433286	32	NC_010848	Flavobacterium sp. KI723T1 plasmid pOAD2 DNA, complete sequence	24693-24724	8	0.75
NZ_CP049863_2	2.15\|2433377\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433377-2433408	32	MN103533	Mycobacterium phage Weirdo19, complete genome	52344-52375	8	0.75
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NC_015184	Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence	170880-170911	8	0.75
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	885157-885188	8	0.75
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NZ_CP014800	Salipiger profundus strain JLT2016 plasmid pTPRO4, complete sequence	4662-4693	8	0.75
NZ_CP049863_2	2.21\|2433743\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433743-2433774	32	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	420683-420714	8	0.75
NZ_CP049863_2	2.22\|2433804\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433804-2433835	32	NZ_CP039967	Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence	16304-16335	8	0.75
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_CP010955	Sphingobium sp. YBL2 plasmid 1pYBL2-1, complete sequence	4377-4406	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_CP045122	Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence	194844-194873	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	127164-127193	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	CP021185	Sphingomonas wittichii DC-6 plasmid pDC04, complete sequence	22631-22660	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	693287-693316	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_CP018224	Tardibacter chloracetimidivorans strain JJ-A5 plasmid pHSL3, complete sequence	18069-18098	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_CP013267	Sphingobium baderi strain DE-13 plasmid pDE3, complete sequence	47972-48001	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_CP041019	Sphingobium fuliginis ATCC 27551 plasmid pSF2, complete sequence	46182-46211	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	295807-295836	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NC_014007	Sphingobium japonicum UT26S plasmid pCHQ1, complete sequence	18718-18747	8	0.733
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_CP047221	Sphingobium yanoikuyae strain YC-JY1 plasmid unnamed2, complete sequence	24732-24761	8	0.733
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	879914-879945	8	0.75
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	MN945904	Mycobacterium phage Eponine, complete genome	27307-27338	8	0.75
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	KX621007	Mycobacterium phage Taquito, complete genome	26992-27023	8	0.75
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	MH051258	Mycobacterium phage SamScheppers, complete genome	26945-26976	8	0.75
NZ_CP049863_2	2.30\|2434290\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434290-2434321	32	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	861600-861631	8	0.75
NZ_CP049863_2	2.30\|2434290\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434290-2434321	32	NZ_CP049319	Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence	634425-634456	8	0.75
NZ_CP049863_2	2.30\|2434290\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434290-2434321	32	NZ_CP049319	Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence	669052-669083	8	0.75
NZ_CP049863_2	2.30\|2434290\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434290-2434321	32	NZ_CP049322	Caballeronia sp. SBC2 plasmid pSBC2-6, complete sequence	98776-98807	8	0.75
NZ_CP049863_2	2.32\|2434412\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434412-2434443	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	277462-277493	8	0.75
NZ_CP049863_2	2.32\|2434412\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434412-2434443	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	522910-522941	8	0.75
NZ_CP049863_2	2.32\|2434412\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434412-2434443	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	523043-523074	8	0.75
NZ_CP049863_2	2.5\|2432766\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432766-2432797	32	NZ_CP024582	Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence	132987-133018	9	0.719
NZ_CP049863_2	2.5\|2432766\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432766-2432797	32	NZ_CP024582	Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence	338500-338531	9	0.719
NZ_CP049863_2	2.5\|2432766\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432766-2432797	32	NZ_CP024583	Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence	63765-63796	9	0.719
NZ_CP049863_2	2.5\|2432766\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432766-2432797	32	NZ_CP024587	Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence	104450-104481	9	0.719
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	NZ_CP017148	Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence	195538-195569	9	0.719
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1141536-1141567	9	0.719
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	NZ_CP024427	Paracoccus yeei strain TT13 plasmid pTT13-5, complete sequence	4791-4822	9	0.719
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	NZ_CP020443	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence	129236-129267	9	0.719
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	706489-706520	9	0.719
NZ_CP049863_2	2.10\|2433072\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433072-2433103	32	NZ_CP016619	Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence	300955-300986	9	0.719
NZ_CP049863_2	2.13\|2433255\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433255-2433286	32	NC_019957	Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence	245801-245832	9	0.719
NZ_CP049863_2	2.13\|2433255\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433255-2433286	32	NC_014159	Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence	16067-16098	9	0.719
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	437369-437400	9	0.719
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	466455-466486	9	0.719
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NZ_CP004394	Celeribacter indicus strain P73 plasmid pP73A, complete sequence	128987-129018	9	0.719
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	MH809532	Burkholderia phage phiE131, complete genome	27460-27491	9	0.719
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	MH809533	Burkholderia phage phiE058, complete genome	27460-27491	9	0.719
NZ_CP049863_2	2.22\|2433804\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433804-2433835	32	NC_023136	Leisingera methylohalidivorans DSM 14336 plasmid unnamed, complete sequence	224646-224677	9	0.719
NZ_CP049863_2	2.22\|2433804\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433804-2433835	32	NZ_CP045421	Maribius sp. THAF1 plasmid pTHAF1_a, complete sequence	16229-16260	9	0.719
NZ_CP049863_2	2.26\|2434048\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434048-2434079	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	2126958-2126989	9	0.719
NZ_CP049863_2	2.26\|2434048\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434048-2434079	32	NZ_CP021360	Acidovorax carolinensis strain NA2 plasmid pACNA2.1, complete sequence	45958-45989	9	0.719
NZ_CP049863_2	2.26\|2434048\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434048-2434079	32	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	32138-32169	9	0.719
NZ_CP049863_2	2.26\|2434048\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434048-2434079	32	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	18189-18220	9	0.719
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	301037-301066	9	0.7
NZ_CP049863_2	2.27\|2434109\|30\|NZ_CP049863\|CRISPRCasFinder,CRT	2434109-2434138	30	NC_004933	Streptomyces lividans 1326 plasmid SLP2, complete sequence	31445-31474	9	0.7
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	MN807247	Mycobacterium phage Chupacabra, complete genome	18223-18254	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	MF773750	Mycobacterium phage OKCentral2016, complete genome	17930-17961	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	JX307704	Mycobacterium virus Goose, complete genome	18224-18255	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	NZ_CP035502	Sphingosinicella sp. BN140058 plasmid p1, complete sequence	47766-47797	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	MN369761	Mycobacterium phage Malthus, complete genome	26466-26497	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	MK224497	Mycobacterium phage Henu3, complete genome	31607-31638	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	AP018469	Mycobacterium phage Y10 DNA, complete genome, note: sample1	26542-26573	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	AP018470	Mycobacterium phage Y2 DNA, complete genome	26542-26573	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	MT310882	Mycobacterium phage JF1, complete genome	26542-26573	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	AP018471	Mycobacterium phage Y10 DNA, complete genome, note: sample2	26542-26573	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	MF140435	Mycobacterium phage Wintermute, complete genome	26542-26573	9	0.719
NZ_CP049863_2	2.29\|2434229\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434229-2434260	32	NC_027365	Mycobacterium virus Fionnbarth, complete genome	26543-26574	9	0.719
NZ_CP049863_2	2.31\|2434351\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434351-2434382	32	NZ_CP044217	Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence	168526-168557	9	0.719
NZ_CP049863_2	2.32\|2434412\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434412-2434443	32	NZ_AP022558	Geobacillus subterraneus strain E55-1 plasmid pGspE55-1, complete sequence	11215-11246	9	0.719
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	723292-723323	10	0.688
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	714598-714629	10	0.688
NZ_CP049863_2	2.6\|2432827\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432827-2432858	32	NZ_CP010860	Marinovum algicola DG 898 plasmid pMaD5, complete sequence	141940-141971	10	0.688
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NZ_CP050084	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence	61701-61732	10	0.688
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	380870-380901	10	0.688
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	668427-668458	10	0.688
NZ_CP049863_2	2.16\|2433438\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433438-2433469	32	NZ_CP053209	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence	164730-164761	10	0.688
NZ_CP049863_2	2.20\|2433682\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433682-2433713	32	NC_019313	Sinorhizobium meliloti plasmid pHRC017, complete sequence	194537-194568	10	0.688
NZ_CP049863_2	2.22\|2433804\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433804-2433835	32	MH067967	Arthrobacter sp. strain ANT_H19B plasmid pA19BH1, complete sequence	58653-58684	10	0.688
NZ_CP049863_2	2.22\|2433804\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433804-2433835	32	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	21273-21304	10	0.688
NZ_CP049863_2	2.31\|2434351\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434351-2434382	32	NZ_CP022317	Brachybacterium avium strain VR2415 plasmid unnamed1	34272-34303	10	0.688
NZ_CP049863_2	2.32\|2434412\|32\|NZ_CP049863\|CRISPRCasFinder,CRT	2434412-2434443	32	NC_009427	Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence	170137-170168	10	0.688
NZ_CP049863_2	2.1\|2432522\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2432522-2432553	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	1474716-1474747	11	0.656
NZ_CP049863_2	2.11\|2433133\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433133-2433164	32	JN035618	Gordonia phage GTE7, complete genome	71564-71595	11	0.656
NZ_CP049863_2	2.11\|2433133\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433133-2433164	32	NC_028673	Gordonia phage GMA7, complete genome	70567-70598	11	0.656
NZ_CP049863_2	2.20\|2433682\|32\|NZ_CP049863\|PILER-CR,CRISPRCasFinder,CRT	2433682-2433713	32	NC_016592	Burkholderia sp. YI23 plasmid byi_3p, complete sequence	82763-82794	11	0.656

1. spacer 2.20|2433682|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046258 (Gordonia sp. 135 plasmid pG135, complete sequence) position: , mismatch: 2, identity: 0.938

gggtgttgagctcgacccgactaccgctcaga	CRISPR spacer
gggtgtggagctcgacccgacgaccgctcaga	Protospacer
****** ************** **********

2. spacer 2.35|2434302|24|NZ_CP049863|PILER-CR matches to MK496050 (Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence) position: , mismatch: 3, identity: 0.875

gacgcagcgcctgcactacaggtg	CRISPR spacer
cacgcagcgcctgagctacaggtg	Protospacer
 ************ .*********

3. spacer 2.35|2434302|24|NZ_CP049863|PILER-CR matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 3, identity: 0.875

gacgcagcgcctgcactacaggtg	CRISPR spacer
cacgcagcgcctgagctacaggtg	Protospacer
 ************ .*********

4. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to KM659098 (Sinorhizobium sp. LM21 plasmid pLM21S1, complete sequence) position: , mismatch: 6, identity: 0.812

gttatgcgcgaccatgcagagcgtggcgtcag--	CRISPR spacer
gttatgcgcgagcacgcagagc--ggtttcagcg	Protospacer
*********** **.*******  **. ****

5. spacer 2.30|2434290|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MK496050 (Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence) position: , mismatch: 6, identity: 0.812

agtgtagc-gacgcagcgcctgcactacaggtg	CRISPR spacer
-tggtagctcacgcagcgcctgagctacaggtg	Protospacer
   *****  ************ .*********

6. spacer 2.30|2434290|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 6, identity: 0.812

agtgtagc-gacgcagcgcctgcactacaggtg	CRISPR spacer
-tggtagctcacgcagcgcctgagctacaggtg	Protospacer
   *****  ************ .*********

7. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 6, identity: 0.786

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
atatcggcgacgggaacctgcatctcgt	Protospacer
*  *** ***************.***.

8. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to NZ_CP035502 (Sphingosinicella sp. BN140058 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.786

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
agatcttcgacgggaacctgcacaacgg	Protospacer
** ** *****************  *..

9. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to MN807247 (Mycobacterium phage Chupacabra, complete genome) position: , mismatch: 6, identity: 0.786

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
agctggtcgacgggagcctgcacgacgc	Protospacer
**** **********.*******  *.

10. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to MF773750 (Mycobacterium phage OKCentral2016, complete genome) position: , mismatch: 6, identity: 0.786

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
agctggtcgacgggagcctgcacgacgc	Protospacer
**** **********.*******  *.

11. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to JX307704 (Mycobacterium virus Goose, complete genome) position: , mismatch: 6, identity: 0.786

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
agctggtcgacgggagcctgcacgacgc	Protospacer
**** **********.*******  *.

12. spacer 2.1|2432522|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021021 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pE, complete sequence) position: , mismatch: 7, identity: 0.781

tacggtcacaacgcggccgctggcaactgcct	CRISPR spacer
cacctgcgcatcgcggccgctggccactgcct	Protospacer
.**   *.** ************* *******

13. spacer 2.1|2432522|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021021 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pE, complete sequence) position: , mismatch: 7, identity: 0.781

tacggtcacaacgcggccgctggcaactgcct	CRISPR spacer
cacctgcgcatcgcggccgctggccactgcct	Protospacer
.**   *.** ************* *******

14. spacer 2.1|2432522|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021004 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pE, complete sequence) position: , mismatch: 7, identity: 0.781

tacggtcacaacgcggccgctggcaactgcct	CRISPR spacer
cacctgcgcatcgcggccgctggccactgcct	Protospacer
.**   *.** ************* *******

15. spacer 2.5|2432766|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021815 (Sinorhizobium meliloti strain M270 plasmid accessoryA, complete sequence) position: , mismatch: 7, identity: 0.781

tgggccttgtggcagaggtagccgcgatcgac	CRISPR spacer
aggcgactgtggcggaggcagccgcgatcgac	Protospacer
 **   .******.****.*************

16. spacer 2.21|2433743|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017947 (Bosea sp. Tri-49 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttccatcctcgcgcagcccgtacttgccaatg	CRISPR spacer
gaacatcctcgcgcagcacgtactggccggtg	Protospacer
   ************** ****** ***..**

17. spacer 2.22|2433804|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_010335 (Caulobacter sp. K31 plasmid pCAUL01, complete sequence) position: , mismatch: 7, identity: 0.781

gtaaccgatcacgttgccagcctggacgggtg	CRISPR spacer
gacgccgatcacgtcgccggcctggacgggac	Protospacer
*  .**********.***.***********

18. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 7, identity: 0.767

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gtcgccgccgcggcgggcaccccggtggtc	Protospacer
  ******* *.**************. *.

19. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to MN369761 (Mycobacterium phage Malthus, complete genome) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

20. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to MK224497 (Mycobacterium phage Henu3, complete genome) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

21. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to MN945904 (Mycobacterium phage Eponine, complete genome) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

22. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to AP018469 (Mycobacterium phage Y10 DNA, complete genome, note: sample1) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

23. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to AP018470 (Mycobacterium phage Y2 DNA, complete genome) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

24. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to MT310882 (Mycobacterium phage JF1, complete genome) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

25. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to AP018471 (Mycobacterium phage Y10 DNA, complete genome, note: sample2) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

26. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to KX621007 (Mycobacterium phage Taquito, complete genome) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

27. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to MH051258 (Mycobacterium phage SamScheppers, complete genome) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

28. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to MF140435 (Mycobacterium phage Wintermute, complete genome) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

29. spacer 2.34|2434237|28|NZ_CP049863|PILER-CR matches to NC_027365 (Mycobacterium virus Fionnbarth, complete genome) position: , mismatch: 7, identity: 0.75

agctcgtcgacgggaacctgcacctcaa	CRISPR spacer
ctgtcgtcgacgggaacctgccactcgg	Protospacer
   ******************  ***..

30. spacer 3.1|3001511|31|NZ_CP049863|CRISPRCasFinder matches to NZ_CP016593 (Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence) position: , mismatch: 7, identity: 0.774

gtcaagc---cagggcatgggcattccccgtccg	CRISPR spacer
---cagctttttgggcattggcattccccgtccg	Protospacer
    ***   . ****** ***************

31. spacer 3.1|3001511|31|NZ_CP049863|CRISPRCasFinder matches to NC_017386 (Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

gtcaagc---cagggcatgggcattccccgtccg	CRISPR spacer
---cagctttttgggcattggcattccccgtccg	Protospacer
    ***   . ****** ***************

32. spacer 3.1|3001511|31|NZ_CP049863|CRISPRCasFinder matches to NC_014621 (Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence) position: , mismatch: 7, identity: 0.774

gtcaagc---cagggcatgggcattccccgtccg	CRISPR spacer
---cagctttttgggcattggcattccccgtccg	Protospacer
    ***   . ****** ***************

33. spacer 3.1|3001511|31|NZ_CP049863|CRISPRCasFinder matches to NZ_CP012909 (Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

gtcaagc---cagggcatgggcattccccgtccg	CRISPR spacer
---cagctttttgggcattggcattccccgtccg	Protospacer
    ***   . ****** ***************

34. spacer 2.1|2432522|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_017078 (Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence) position: , mismatch: 8, identity: 0.75

tacggtcacaacgcggccgctggcaactgcct	CRISPR spacer
ccatgtgccaatgcggccgctggcaacttcct	Protospacer
.   **  ***.**************** ***

35. spacer 2.2|2432583|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013108 (Sinorhizobium americanum strain CFNEI 73 plasmid A, complete sequence) position: , mismatch: 8, identity: 0.75

aaatggagcgccattaaggccaactcaaaagg	CRISPR spacer
ggatggagcgccgtaaaggccaactccgaact	Protospacer
..**********.* *********** .**

36. spacer 2.3|2432644|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to MG592626 (Vibrio phage 1.262.O._10N.286.51.A9, partial genome) position: , mismatch: 8, identity: 0.75

gtcgactcagccgaatcaagacccgaatcacg	CRISPR spacer
gcatccacagcggaatcaagaaccgaatcatg	Protospacer
*.   * **** ********* ********.*

37. spacer 2.5|2432766|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tgggcct---tgtggcagaggtagccgcgatcgac	CRISPR spacer
---gctcagaagtggccgaggtagccgccatcgac	Protospacer
   **..    ***** *********** ******

38. spacer 2.5|2432766|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.75

tgggcct---tgtggcagaggtagccgcgatcgac	CRISPR spacer
---gctcagaagtggccgaggtagccgccatcgac	Protospacer
   **..    ***** *********** ******

39. spacer 2.5|2432766|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025549 (Mycobacterium paragordonae strain 49061 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

----tgggccttgtggcagaggtagccgcgatcgac	CRISPR spacer
ccaccggg----atggccgaggtcgccgcgatcgac	Protospacer
    .***    .**** ***** ************

40. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 8, identity: 0.75

gttatgcgcgaccatgcagagcgtggcgtcag	CRISPR spacer
gaacagcgcgaccatgtagagcgtgtcgtccc	Protospacer
*    ***********.******** ****

41. spacer 2.7|2432888|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to KF147891 (Pseudomonas phage PaBG, complete genome) position: , mismatch: 8, identity: 0.75

ggcgttcaccgaatacacggaacgcattaacc	CRISPR spacer
acagctcaccgataacacggaacgcattctcc	Protospacer
.  *.*******  **************  **

42. spacer 2.11|2433133|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_019957 (Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence) position: , mismatch: 8, identity: 0.75

caaagccgccgaccctgccgcctacattgccg--	CRISPR spacer
ggcggccgccgacccggccgccgacat--ccggc	Protospacer
 . .*********** ****** ****  ***

43. spacer 2.11|2433133|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041044 (Paracoccus sp. AK26 plasmid pAK2, complete sequence) position: , mismatch: 8, identity: 0.75

--caaagccgccgaccctgccgcctacattgccg	CRISPR spacer
tccgcggc--ccgaccatgccgcctacatcgcct	Protospacer
  *. .**  ****** ************.***

44. spacer 2.13|2433255|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_010848 (Flavobacterium sp. KI723T1 plasmid pOAD2 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

------gctccaaggctcgcccgtcttccgctgcgctc	CRISPR spacer
cgcgacgct------ctcgcccgtctctcgctgcgctc	Protospacer
      ***      ***********..**********

45. spacer 2.13|2433255|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_010848 (Flavobacterium sp. KI723T1 plasmid pOAD2 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

------gctccaaggctcgcccgtcttccgctgcgctc	CRISPR spacer
cgcgacgct------ctcgcccgtctctcgctgcgctc	Protospacer
      ***      ***********..**********

46. spacer 2.15|2433377|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to MN103533 (Mycobacterium phage Weirdo19, complete genome) position: , mismatch: 8, identity: 0.75

aacgtgatcgaggtggtcacaattgaggacga	CRISPR spacer
ggggcgatcgaggtggtcacacttgacgaccg	Protospacer
.. *.**************** **** *** .

47. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_015184 (Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence) position: , mismatch: 8, identity: 0.75

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
gagagtatgatctcgtcgagcttggtctgaag	Protospacer
 *****.******** ******** . **  *

48. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 8, identity: 0.75

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
aggaggaaaatctcgacgggcttgtcgtgccg	Protospacer
 .*** . .*********.*****.*******

49. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014800 (Salipiger profundus strain JLT2016 plasmid pTPRO4, complete sequence) position: , mismatch: 8, identity: 0.75

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
ccgaaactgatctccacgagcttgccgcgcgt	Protospacer
* **.  ******* ************.**

50. spacer 2.21|2433743|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttccatcctcgcgcagcccgtacttgccaatg	CRISPR spacer
cgtaatcctcacgcagcccgaacttgccgagg	Protospacer
. . ******.********* *******.* *

51. spacer 2.22|2433804|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039967 (Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gtaaccgatcacgttgccagcctgga---cgggtg	CRISPR spacer
ggtaccgatcacgccgccagcctggaacccga---	Protospacer
*  **********..***********   **.

52. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP010955 (Sphingobium sp. YBL2 plasmid 1pYBL2-1, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gccgccgccccagcggccatcccggcagca	Protospacer
  ************** **.*****.* .

53. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP045122 (Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
ctcgacgccccggcgggcaccccgggcgat	Protospacer
. ** ******.*************    *

54. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
atcgccgccgcagcgggcacccaggcatcg	Protospacer
  ******* ************ **.*..

55. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to CP021185 (Sphingomonas wittichii DC-6 plasmid pDC04, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gccgccgccccagcggccatcccggcagca	Protospacer
  ************** **.*****.* .

56. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gccgccgccccggcgggcacgccggaaaac	Protospacer
  *********.******** **** *  .

57. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP018224 (Tardibacter chloracetimidivorans strain JJ-A5 plasmid pHSL3, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gccgccgccccagcggccatcccggcagca	Protospacer
  ************** **.*****.* .

58. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP013267 (Sphingobium baderi strain DE-13 plasmid pDE3, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gccgccgccccagcggccatcccggcagca	Protospacer
  ************** **.*****.* .

59. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP041019 (Sphingobium fuliginis ATCC 27551 plasmid pSF2, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gccgccgccccagcggccatcccggcagca	Protospacer
  ************** **.*****.* .

60. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
atcgccgccgcagcgggcacccaggcatcg	Protospacer
  ******* ************ **.*..

61. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NC_014007 (Sphingobium japonicum UT26S plasmid pCHQ1, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gccgccgccccagcggccatcccggcagca	Protospacer
  ************** **.*****.* .

62. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP047221 (Sphingobium yanoikuyae strain YC-JY1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gccgccgccccagcggccatcccggcagca	Protospacer
  ************** **.*****.* .

63. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.75

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
gggcatatcggcgacgggaacctgcatctcgt	Protospacer
**. *  *** ***************.***.

64. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MN945904 (Mycobacterium phage Eponine, complete genome) position: , mismatch: 8, identity: 0.75

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
gtagctgtcgtcgacgggaacctgccactcgg	Protospacer
* **   ******************  ***..

65. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to KX621007 (Mycobacterium phage Taquito, complete genome) position: , mismatch: 8, identity: 0.75

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
gtagctgtcgtcgacgggaacctgccactcgg	Protospacer
* **   ******************  ***..

66. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MH051258 (Mycobacterium phage SamScheppers, complete genome) position: , mismatch: 8, identity: 0.75

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
gtagctgtcgtcgacgggaacctgccactcgg	Protospacer
* **   ******************  ***..

67. spacer 2.30|2434290|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 8, identity: 0.75

agtgtagcgacgcagcgcctgcactacaggtg	CRISPR spacer
cgtatagcgtcgcagcgcctgcaccaacggat	Protospacer
 **.***** **************.*  **

68. spacer 2.30|2434290|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP049319 (Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence) position: , mismatch: 8, identity: 0.75

agtgtagcgacgcagcgcctgcactacaggtg	CRISPR spacer
cgtatagcgtcgcagcgcctgcaccaacggat	Protospacer
 **.***** **************.*  **

69. spacer 2.30|2434290|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP049319 (Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence) position: , mismatch: 8, identity: 0.75

agtgtagcgacgcagcgcctgcactacaggtg	CRISPR spacer
cgtatagcgtcgcagcgcctgcaccaacggat	Protospacer
 **.***** **************.*  **

70. spacer 2.30|2434290|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP049322 (Caballeronia sp. SBC2 plasmid pSBC2-6, complete sequence) position: , mismatch: 8, identity: 0.75

agtgtagcgacgcagcgcctgcactacaggtg	CRISPR spacer
cgtatagcgtcgcagcgcctgcaccaacggat	Protospacer
 **.***** **************.*  **

71. spacer 2.32|2434412|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 8, identity: 0.75

ctgttcttcgctaggctcgcctaccaacaaac	CRISPR spacer
ctgttcatcgctacgctcgcctacatccgcaa	Protospacer
****** ****** **********   *. *

72. spacer 2.32|2434412|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 8, identity: 0.75

ctgttcttcgctaggctcgcctaccaacaaac	CRISPR spacer
ctgttcatcgctacgctcgcctacatccgcaa	Protospacer
****** ****** **********   *. *

73. spacer 2.32|2434412|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 8, identity: 0.75

ctgttcttcgctaggctcgcctaccaacaaac	CRISPR spacer
ctgttcatcgctacgctcgcctacatccgcaa	Protospacer
****** ****** **********   *. *

74. spacer 2.5|2432766|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024582 (Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgggccttgtggcagaggtagccgcgatcgac	CRISPR spacer
gtgacgccatggccgcggtagccgcgatcgac	Protospacer
  *.* ...**** * ****************

75. spacer 2.5|2432766|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024582 (Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgggccttgtggcagaggtagccgcgatcgac	CRISPR spacer
gtgacgccatggccgcggtagccgcgatcgac	Protospacer
  *.* ...**** * ****************

76. spacer 2.5|2432766|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024583 (Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tgggccttgtggcagaggtagccgcgatcgac	CRISPR spacer
gtgacgccatggccgcggtagccgcgatcgac	Protospacer
  *.* ...**** * ****************

77. spacer 2.5|2432766|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024587 (Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tgggccttgtggcagaggtagccgcgatcgac	CRISPR spacer
gtgacgccatggccgcggtagccgcgatcgac	Protospacer
  *.* ...**** * ****************

78. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017148 (Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gttatgcgcgaccatgcagagcgtggcgtcag	CRISPR spacer
gaagctcgcgaccatgccgaccgtggcgtcga	Protospacer
*  .. *********** ** *********..

79. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.719

gttatgcgcgaccatgcagagcgtggcgtcag	CRISPR spacer
tttcggcgcgaccaagcagagggtggcgatgc	Protospacer
 **  ********* ****** ****** ..

80. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024427 (Paracoccus yeei strain TT13 plasmid pTT13-5, complete sequence) position: , mismatch: 9, identity: 0.719

gttatgcgcgaccatgcagagcgtggcgtcag	CRISPR spacer
ctgagcaacgaccatgcagagggttgcgtcat	Protospacer
 * *   .************* ** ******

81. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020443 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gttatgcgcgaccatgcagagcgtggcgtcag	CRISPR spacer
ctgagcaacgaccatgcagagggttgcgtcat	Protospacer
 * *   .************* ** ******

82. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 9, identity: 0.719

gttatgcgcgaccatgcagagcgtggcgtcag	CRISPR spacer
cttcggcgcgacgaggcagagcgtggcgatgc	Protospacer
 **  ******* * ************* ..

83. spacer 2.10|2433072|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016619 (Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

aaagcgtccacagggatgacgcgcacctggcg	CRISPR spacer
gagccctccacatggatcacgcgcacctgttc	Protospacer
.*. * ****** **** *********** .

84. spacer 2.13|2433255|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_019957 (Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence) position: , mismatch: 9, identity: 0.719

gctccaaggctcgcccgtcttccgctgcgctc	CRISPR spacer
cttctcgcgctcgcccgttctccgctgcgcta	Protospacer
 .**. . **********..***********

85. spacer 2.13|2433255|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_014159 (Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence) position: , mismatch: 9, identity: 0.719

gctccaaggctcgcccgtcttccgctgcgctc	CRISPR spacer
cgcccaacgctcgcccggcttccgcttcttcc	Protospacer
  .**** ********* ******** * ..*

86. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.719

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
gccggtgtgatctcgacgagattgccgcgata	Protospacer
   .**************** ******.* ..

87. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 9, identity: 0.719

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
gcgggtgcgatctcgacgagattgccgcgata	Protospacer
  *.***.************ ******.* ..

88. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004394 (Celeribacter indicus strain P73 plasmid pP73A, complete sequence) position: , mismatch: 9, identity: 0.719

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
cgtttcgcgacctcgacgagcttgccgcgcca	Protospacer
*.   .*.**.****************.***.

89. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to MH809532 (Burkholderia phage phiE131, complete genome) position: , mismatch: 9, identity: 0.719

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
cactgtgggatctcgccgagcttgccgcttat	Protospacer
**  *** ******* ***********. .

90. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to MH809533 (Burkholderia phage phiE058, complete genome) position: , mismatch: 9, identity: 0.719

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
cactgtgggatctcgccgagcttgccgcttat	Protospacer
**  *** ******* ***********. .

91. spacer 2.22|2433804|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_023136 (Leisingera methylohalidivorans DSM 14336 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtaaccgatcacgttgccagcctggacgggtg	CRISPR spacer
ttcaaggattaccttgccagcctggacggtcc	Protospacer
 * *  ***.** **************** .

92. spacer 2.22|2433804|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045421 (Maribius sp. THAF1 plasmid pTHAF1_a, complete sequence) position: , mismatch: 9, identity: 0.719

gtaaccgatcacgttgccagcctggacgggtg	CRISPR spacer
accgccgatcacgttgccggcccggaccgtcg	Protospacer
.. .**************.***.**** * .*

93. spacer 2.26|2434048|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 9, identity: 0.719

gtgggaggccgcgaaagctgcgtacgtgatcc	CRISPR spacer
cgcggaggccgcgaaagctgcggaggtccgcg	Protospacer
   ******************* * **   *

94. spacer 2.26|2434048|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP021360 (Acidovorax carolinensis strain NA2 plasmid pACNA2.1, complete sequence) position: , mismatch: 9, identity: 0.719

gtgggaggccgcgaaagctgcgtacgtgatcc	CRISPR spacer
gtggaaggccacgaaagctgcgtgatcaagcg	Protospacer
****.*****.************.  ..* *

95. spacer 2.26|2434048|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 9, identity: 0.719

gtgggaggccgcgaaagctgcgtacgtgatcc	CRISPR spacer
gtggaaggccacgaaagctgcgtgatcaagcg	Protospacer
****.*****.************.  ..* *

96. spacer 2.26|2434048|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 9, identity: 0.719

gtgggaggccgcgaaagctgcgtacgtgatcc	CRISPR spacer
gtggaaggccacgaaagctgcgtgatcaagcg	Protospacer
****.*****.************.  ..* *

97. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 9, identity: 0.7

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
aacgccgccacagcgagcaccccgacgacc	Protospacer
 ******** *****.********... ..

98. spacer 2.27|2434109|30|NZ_CP049863|CRISPRCasFinder,CRT matches to NC_004933 (Streptomyces lividans 1326 plasmid SLP2, complete sequence) position: , mismatch: 9, identity: 0.7

tacgccgccccagcgggcaccccggtactt	CRISPR spacer
gacgccgcgccagcgcgcaccccgtcggca	Protospacer
 ******* ****** ******** .. .

99. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MN807247 (Mycobacterium phage Chupacabra, complete genome) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
catgagctggtcgacgggagcctgcacgacgc	Protospacer
 . ***** **********.*******  *.

100. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MF773750 (Mycobacterium phage OKCentral2016, complete genome) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
catgagctggtcgacgggagcctgcacgacgc	Protospacer
 . ***** **********.*******  *.

101. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to JX307704 (Mycobacterium virus Goose, complete genome) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
catgagctggtcgacgggagcctgcacgacgc	Protospacer
 . ***** **********.*******  *.

102. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP035502 (Sphingosinicella sp. BN140058 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
gcccagatcttcgacgggaacctgcacaacgg	Protospacer
*   ** ** *****************  *..

103. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MN369761 (Mycobacterium phage Malthus, complete genome) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
atagctgtcgtcgacgggaacctgccactcgg	Protospacer
. **   ******************  ***..

104. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MK224497 (Mycobacterium phage Henu3, complete genome) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
atagctgtcgtcgacgggaacctgccactcgg	Protospacer
. **   ******************  ***..

105. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to AP018469 (Mycobacterium phage Y10 DNA, complete genome, note: sample1) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
atagctgtcgtcgacgggaacctgccactcgg	Protospacer
. **   ******************  ***..

106. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to AP018470 (Mycobacterium phage Y2 DNA, complete genome) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
atagctgtcgtcgacgggaacctgccactcgg	Protospacer
. **   ******************  ***..

107. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MT310882 (Mycobacterium phage JF1, complete genome) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
atagctgtcgtcgacgggaacctgccactcgg	Protospacer
. **   ******************  ***..

108. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to AP018471 (Mycobacterium phage Y10 DNA, complete genome, note: sample2) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
atagctgtcgtcgacgggaacctgccactcgg	Protospacer
. **   ******************  ***..

109. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to MF140435 (Mycobacterium phage Wintermute, complete genome) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
atagctgtcgtcgacgggaacctgccactcgg	Protospacer
. **   ******************  ***..

110. spacer 2.29|2434229|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NC_027365 (Mycobacterium virus Fionnbarth, complete genome) position: , mismatch: 9, identity: 0.719

ggagagctcgtcgacgggaacctgcacctcaa	CRISPR spacer
atagctgtcgtcgacgggaacctgccactcgg	Protospacer
. **   ******************  ***..

111. spacer 2.31|2434351|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

----ggggtaactctgggcctggccctcggctggat	CRISPR spacer
cctcgg----cctctgggcctggccgtcggccgggc	Protospacer
    **     ************** *****.**..

112. spacer 2.32|2434412|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_AP022558 (Geobacillus subterraneus strain E55-1 plasmid pGspE55-1, complete sequence) position: , mismatch: 9, identity: 0.719

ctgttcttcgctaggctcgcctaccaacaaac	CRISPR spacer
aaatagtccgcttggctcgcctcccaacaaaa	Protospacer
  .*  *.**** ********* ********

113. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 10, identity: 0.688

gttatgcgcgaccatgcagagcgtggcgtcag	CRISPR spacer
gcgcggcgcgacgaggcagagcgtggcgatgc	Protospacer
*.   ******* * ************* ..

114. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 10, identity: 0.688

gttatgcgcgaccatgcagagcgtggcgtcag	CRISPR spacer
gcgcggcgcgacgaggcagagcgtggcgatgc	Protospacer
*.   ******* * ************* ..

115. spacer 2.6|2432827|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 10, identity: 0.688

gttatgcgcgaccatgcagagcgtggcgtcag	CRISPR spacer
caggagcgcgaccttgcagagcttggcgccct	Protospacer
   . ******** ******** *****.*

116. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050084 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence) position: , mismatch: 10, identity: 0.688

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
gccggtgcgatctcgacgagattgccgcgata	Protospacer
   .***.************ ******.* ..

117. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 10, identity: 0.688

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
gccggtgcgatctcgacgagattgccgcgata	Protospacer
   .***.************ ******.* ..

118. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 10, identity: 0.688

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
gccggtgcgatctcgacgagattgccgcgata	Protospacer
   .***.************ ******.* ..

119. spacer 2.16|2433438|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053209 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence) position: , mismatch: 10, identity: 0.688

cagagtgtgatctcgacgagcttgccgtgccg	CRISPR spacer
gccggtgcgatctcgacgagattgccgcgata	Protospacer
   .***.************ ******.* ..

120. spacer 2.20|2433682|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_019313 (Sinorhizobium meliloti plasmid pHRC017, complete sequence) position: , mismatch: 10, identity: 0.688

gggtgttgagctcgacccgactaccgctcaga	CRISPR spacer
tcgctttgaggtcgacccgactatcgctgccg	Protospacer
  *. ***** ************.****   .

121. spacer 2.22|2433804|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to MH067967 (Arthrobacter sp. strain ANT_H19B plasmid pA19BH1, complete sequence) position: , mismatch: 10, identity: 0.688

gtaaccgatcacgttgccagcctggacgggtg	CRISPR spacer
tcgggcgatcacggtgccggcctggacggtgt	Protospacer
 ... ******** ****.**********

122. spacer 2.22|2433804|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 10, identity: 0.688

gtaaccgatcacgttgccagcctggacgggtg	CRISPR spacer
gccgtcgatcacgtcgccggcctggacgacat	Protospacer
*. ..*********.***.*********.

123. spacer 2.31|2434351|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NZ_CP022317 (Brachybacterium avium strain VR2415 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

ggggtaactctgggcctggccctcggctggat	CRISPR spacer
acgaccgctctcggcctggccctcgcctggcc	Protospacer
. *.. .**** ************* **** .

124. spacer 2.32|2434412|32|NZ_CP049863|CRISPRCasFinder,CRT matches to NC_009427 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence) position: , mismatch: 10, identity: 0.688

ctgttcttcgctaggctcgcctaccaacaaac	CRISPR spacer
tcgttcctcgctaggctcggctaccaggtctt	Protospacer
..****.************ ******.    .

125. spacer 2.1|2432522|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 11, identity: 0.656

tacggtcacaacgcggccgctggcaactgcct	CRISPR spacer
cacggtcacaacccggccgcaggcgctcaggc	Protospacer
.*********** ******* ***. ...  .

126. spacer 2.11|2433133|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to JN035618 (Gordonia phage GTE7, complete genome) position: , mismatch: 11, identity: 0.656

caaagccgccgaccctgccgcctacattgccg	CRISPR spacer
acgcgccgccgaccctgccgcgcacataaggc	Protospacer
  . ***************** .**** .

127. spacer 2.11|2433133|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_028673 (Gordonia phage GMA7, complete genome) position: , mismatch: 11, identity: 0.656

caaagccgccgaccctgccgcctacattgccg	CRISPR spacer
acgcgccgccgaccctgccgcgcacataaggc	Protospacer
  . ***************** .**** .

128. spacer 2.20|2433682|32|NZ_CP049863|PILER-CR,CRISPRCasFinder,CRT matches to NC_016592 (Burkholderia sp. YI23 plasmid byi_3p, complete sequence) position: , mismatch: 11, identity: 0.656

gggtgttgagctcgacccgactaccgctcaga	CRISPR spacer
aaccaagacgctcgacccgacaaccggtcaga	Protospacer
.. ..  . ************ **** *****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

688520 : 701717

Arthrobacter_phage(44.44%)

portal,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_166288820.1\|688520_692378_-	peptidoglycan DD-metalloendopeptidase family protein	V5R8R0	Arthrobacter_phage	2.5e-65	43.8
WP_166288824.1\|692464_692713_-	hypothetical protein	NA	NA	NA	NA
WP_166288827.1\|692709_692988_-	hypothetical protein	NA	NA	NA	NA
WP_166288830.1\|693068_693398_-	hypothetical protein	NA	NA	NA	NA
WP_166288833.1\|693488_694055_-	hypothetical protein	NA	NA	NA	NA
WP_166288836.1\|694047_694266_-	hypothetical protein	NA	NA	NA	NA
WP_166288839.1\|694297_694696_-	hypothetical protein	Q6VY47	Streptomyces_phage	7.1e-08	32.0
WP_166288842.1\|694688_695027_-	hypothetical protein	NA	NA	NA	NA
WP_166288845.1\|695026_695461_-	hypothetical protein	V5R8Y4	Arthrobacter_phage	9.1e-33	55.2
WP_166288848.1\|695517_695847_-	hypothetical protein	NA	NA	NA	NA
WP_166288851.1\|695850_696807_-	hypothetical protein	A0A2H5BLW0	Streptomyces_phage	4.7e-114	68.8
WP_166288854.1\|696819_697350_-	hypothetical protein	A0A088F7K2	Mycobacterium_phage	5.0e-17	41.2
WP_166288857.1\|697436_698267_-	hypothetical protein	V5RA96	Arthrobacter_phage	8.7e-16	33.5
WP_166288860.1\|698279_699836_-\|portal	phage portal protein	V5RBC3	Arthrobacter_phage	2.6e-77	37.3
WP_166288863.1\|699832_701359_-\|terminase	terminase	A0A1D8EU80	Propionibacterium_phage	2.5e-117	49.1
WP_166288866.1\|701315_701717_-	hypothetical protein	A0A2P1JR42	Mycobacterium_phage	3.0e-06	37.6

DBSCAN-SWA_2

2743963 : 2753925

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_166292142.1\|2743963_2745082_+	ParB N-terminal domain-containing protein	A0A1B0VME2	Pseudomonas_phage	2.4e-13	35.5
WP_166292143.1\|2745071_2745899_+	hypothetical protein	Q4ZC36	Staphylococcus_virus	4.9e-11	25.6
WP_166292144.1\|2745898_2746216_+	hypothetical protein	NA	NA	NA	NA
WP_166292145.1\|2746374_2746797_-	hypothetical protein	NA	NA	NA	NA
WP_166292146.1\|2747545_2747965_+	RusA family crossover junction endodeoxyribonuclease	W0LKB6	Mycobacterium_phage	8.6e-12	38.7
WP_166292147.1\|2748242_2749067_+	hypothetical protein	A0A142KCN6	Gordonia_phage	3.4e-36	37.8
WP_166292148.1\|2749063_2749837_+	hypothetical protein	A0A2P1CGD3	Mycobacterium_phage	1.8e-68	55.8
WP_166292149.1\|2749829_2750198_+	hypothetical protein	NA	NA	NA	NA
WP_166292150.1\|2750194_2750425_+	hypothetical protein	NA	NA	NA	NA
WP_166292151.1\|2750425_2750635_+	hypothetical protein	NA	NA	NA	NA
WP_166292152.1\|2750742_2751507_+	hypothetical protein	G8I6U7	Mycobacterium_virus	3.3e-17	40.7
WP_166292153.1\|2751503_2751971_+	hypothetical protein	NA	NA	NA	NA
WP_166292154.1\|2751963_2752287_+	hypothetical protein	NA	NA	NA	NA
WP_166292155.1\|2752283_2752742_+	single-stranded DNA-binding protein	A0A0K2FNC8	Mycobacterium_phage	2.0e-06	32.8
WP_166292156.1\|2752755_2753925_+	RtcB family protein	A0A286MRF4	Mycobacterium_phage	8.2e-129	61.6

DBSCAN-SWA_3

3630557 : 3638022

Clavibacter_phage(80.0%)

integrase

attL 3621565:3621578|attR 3633583:3633596

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3621565:3621578	attL	NA	NA	NA	NA
WP_166292847.1\|3630557_3631703_+\|integrase	site-specific integrase	A0A0M4RD74	Mycobacterium_phage	1.5e-45	32.0
WP_166292848.1\|3631699_3632119_-	hypothetical protein	NA	NA	NA	NA
WP_166292849.1\|3632288_3633395_-	hypothetical protein	D0U1Z9	Clavibacter_phage	3.3e-95	47.8
WP_166292850.1\|3633403_3633763_-	DUF2190 family protein	D0U1Z8	Clavibacter_phage	2.3e-21	55.2
3633583:3633596	attR	NA	NA	NA	NA
WP_166292851.1\|3633762_3634764_-	hypothetical protein	NA	NA	NA	NA
WP_166292852.1\|3634818_3636330_-	hypothetical protein	D0U1Z6	Clavibacter_phage	9.8e-74	41.0
WP_166292853.1\|3636339_3638022_-	hypothetical protein	U5PXI8	Clavibacter_phage	3.6e-08	42.7

DBSCAN-SWA_4

3679622 : 3687085

Clavibacter_phage(80.0%)

integrase

attL 3679307:3679320|attR 3691500:3691513

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3679307:3679320	attL	NA	NA	NA	NA
WP_166292847.1\|3679622_3680768_+\|integrase	site-specific integrase	A0A0M4RD74	Mycobacterium_phage	1.5e-45	32.0
WP_166292848.1\|3680764_3681184_-	hypothetical protein	NA	NA	NA	NA
WP_166292849.1\|3681352_3682459_-	hypothetical protein	D0U1Z9	Clavibacter_phage	3.3e-95	47.8
WP_166292850.1\|3682467_3682827_-	DUF2190 family protein	D0U1Z8	Clavibacter_phage	2.3e-21	55.2
WP_166292896.1\|3682826_3683243_-	hypothetical protein	NA	NA	NA	NA
WP_166292897.1\|3683236_3683827_-	hypothetical protein	NA	NA	NA	NA
WP_166292852.1\|3683881_3685393_-	hypothetical protein	D0U1Z6	Clavibacter_phage	9.8e-74	41.0
WP_166292853.1\|3685402_3687085_-	hypothetical protein	U5PXI8	Clavibacter_phage	3.6e-08	42.7
3691500:3691513	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP049863

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection