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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP049872 Thermomonas sp. HDW16 chromosome, complete genome 1 crisprs csa3,RT,WYL,Cas9_archaeal,cas3,DEDDh,DinG 0 0 215 0

Results visualization

1. NZ_CP049872
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049872_1 1143359-1143590 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 4292 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_2 7355 : 9993 2 Stx2-converting_phage(50.0%) NA NA
DBSCAN-SWA_3 19953 : 20922 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_4 26488 : 35735 11 Erwinia_phage(33.33%) protease NA
DBSCAN-SWA_5 43695 : 44433 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_6 52016 : 52469 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_7 57038 : 58895 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_8 64082 : 65075 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_9 71030 : 77399 4 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_10 82010 : 82766 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_11 96891 : 98790 1 Sinorhizobium_phage(100.0%) NA NA
DBSCAN-SWA_12 119163 : 129510 9 Salicola_phage(20.0%) NA NA
DBSCAN-SWA_13 151103 : 156918 5 Bodo_saltans_virus(50.0%) NA NA
DBSCAN-SWA_14 169654 : 173428 4 Cronobacter_phage(50.0%) NA NA
DBSCAN-SWA_15 183794 : 184667 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_16 189074 : 189908 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_17 204847 : 208455 2 Halomonas_phage(50.0%) NA NA
DBSCAN-SWA_18 218829 : 219423 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_19 232616 : 238009 2 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_20 241553 : 242351 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_21 250028 : 250994 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_22 254694 : 256728 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_23 261567 : 263044 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_24 276053 : 280947 3 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_25 288882 : 289638 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_26 293240 : 300733 6 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_27 305311 : 306541 2 Rhodococcus_phage(50.0%) NA NA
DBSCAN-SWA_28 347405 : 348161 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_29 353460 : 355305 2 Vibrio_phage(50.0%) tRNA NA
DBSCAN-SWA_30 360525 : 372572 9 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_31 375922 : 377869 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_32 392357 : 394090 2 Bifidobacterium_phage(50.0%) NA NA
DBSCAN-SWA_33 401936 : 402770 1 Sulfolobus_monocaudavirus(100.0%) NA NA
DBSCAN-SWA_34 406084 : 416608 8 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_35 433059 : 438816 2 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_36 443008 : 452069 6 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_37 462451 : 465547 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_38 473564 : 474584 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_39 481117 : 483980 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_40 492280 : 503728 11 Xanthomonas_phage(20.0%) tRNA NA
DBSCAN-SWA_41 514130 : 515291 1 Clostridium_virus(100.0%) NA NA
DBSCAN-SWA_42 528016 : 529222 1 Xanthomonas_phage(100.0%) NA NA
DBSCAN-SWA_43 537497 : 539117 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_44 545311 : 552445 7 Acanthamoeba_polyphaga_mimivirus(25.0%) tRNA NA
DBSCAN-SWA_45 556110 : 559488 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_46 570610 : 571720 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_47 591628 : 593086 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_48 599302 : 600571 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_49 618096 : 619878 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_50 629971 : 633253 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_51 655740 : 658204 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_52 691709 : 693977 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_53 697278 : 697650 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_54 701491 : 704269 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_55 708293 : 708722 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_56 712869 : 717590 5 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_57 726806 : 728793 2 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_58 754507 : 760069 5 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_59 767162 : 767711 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_60 778208 : 779027 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_61 782485 : 783715 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_62 810901 : 814228 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_63 820413 : 821088 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_64 828836 : 830900 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_65 858461 : 859466 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_66 874948 : 875863 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_67 882136 : 887704 4 Pandoravirus(33.33%) NA NA
DBSCAN-SWA_68 891540 : 892689 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_69 897835 : 898777 1 Acanthamoeba_polyphaga_lentillevirus(100.0%) NA NA
DBSCAN-SWA_70 906964 : 908542 1 Catovirus(100.0%) holin NA
DBSCAN-SWA_71 934490 : 935531 1 Shigella_phage(100.0%) NA NA
DBSCAN-SWA_72 942902 : 945011 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_73 948716 : 952241 1 Ectocarpus_siliculosus_virus(100.0%) NA NA
DBSCAN-SWA_74 968091 : 975268 9 Thermobifida_phage(33.33%) NA NA
DBSCAN-SWA_75 979308 : 981087 2 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_76 985901 : 988411 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_77 1002221 : 1005465 3 environmental_halophage(50.0%) NA NA
DBSCAN-SWA_78 1013415 : 1013937 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_79 1027010 : 1030953 5 Enterobacteria_phage(60.0%) NA NA
DBSCAN-SWA_80 1041155 : 1041728 1 Thiobacimonas_phage(100.0%) NA NA
DBSCAN-SWA_81 1047240 : 1047909 1 Salicola_phage(100.0%) NA NA
DBSCAN-SWA_82 1055802 : 1057154 3 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_83 1063785 : 1073131 8 uncultured_Mediterranean_phage(66.67%) tRNA NA
DBSCAN-SWA_84 1080825 : 1082562 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_85 1091700 : 1099115 8 Erwinia_phage(33.33%) tRNA NA
DBSCAN-SWA_86 1102632 : 1108391 9 Pseudomonas_phage(33.33%) protease NA
DBSCAN-SWA_87 1115173 : 1116283 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_88 1125901 : 1127320 1 Pseudomonas_phage(100.0%) integrase attL 1118471:1118485|attR 1135433:1135447
DBSCAN-SWA_89 1136572 : 1138455 2 Mollivirus(50.0%) NA NA
DBSCAN-SWA_90 1143808 : 1144969 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_91 1150332 : 1156269 5 Leptospira_phage(25.0%) transposase NA
DBSCAN-SWA_92 1160828 : 1162043 1 Pseudomonas_phage(100.0%) integrase attL 1151386:1151400|attR 1169571:1169585
DBSCAN-SWA_93 1168433 : 1175585 7 Tupanvirus(25.0%) tRNA NA
DBSCAN-SWA_94 1179300 : 1184306 3 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_95 1188128 : 1196145 9 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) NA NA
DBSCAN-SWA_96 1199213 : 1202003 1 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_97 1221141 : 1226126 3 Streptomyces_phage(50.0%) NA NA
DBSCAN-SWA_98 1235628 : 1236336 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_99 1246938 : 1255412 7 Micromonas_pusilla_virus(33.33%) NA NA
DBSCAN-SWA_100 1262550 : 1263330 1 Microcystis_phage(100.0%) NA NA
DBSCAN-SWA_101 1266654 : 1267746 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_102 1280560 : 1281634 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_103 1290403 : 1291951 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_104 1301035 : 1303567 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_105 1308229 : 1313234 5 Synechococcus_phage(66.67%) NA NA
DBSCAN-SWA_106 1319291 : 1324297 5 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_107 1329609 : 1332462 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_108 1355321 : 1368287 9 Klosneuvirus(28.57%) tRNA NA
DBSCAN-SWA_109 1382264 : 1383686 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_110 1387885 : 1389355 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_111 1393633 : 1395031 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_112 1398566 : 1401247 3 unidentified_phage(50.0%) NA NA
DBSCAN-SWA_113 1407427 : 1410695 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_114 1417206 : 1417779 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_115 1429158 : 1436088 6 Klebsiella_phage(33.33%) NA NA
DBSCAN-SWA_116 1446703 : 1447378 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_117 1453300 : 1457032 5 Acinetobacter_phage(50.0%) protease NA
DBSCAN-SWA_118 1462522 : 1470653 8 Klosneuvirus(25.0%) NA NA
DBSCAN-SWA_119 1490754 : 1496829 5 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_120 1504595 : 1506479 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_121 1525623 : 1531977 6 Catovirus(33.33%) NA NA
DBSCAN-SWA_122 1541390 : 1545783 4 Ostreococcus_tauri_virus(50.0%) NA NA
DBSCAN-SWA_123 1558435 : 1561765 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_124 1566845 : 1568114 1 Orpheovirus(100.0%) NA NA
DBSCAN-SWA_125 1574257 : 1575538 1 uncultured_Mediterranean_phage(100.0%) tRNA NA
DBSCAN-SWA_126 1588459 : 1599312 7 Leptospira_phage(50.0%) NA NA
DBSCAN-SWA_127 1605542 : 1608371 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_128 1612912 : 1613338 1 Powai_lake_megavirus(100.0%) NA NA
DBSCAN-SWA_129 1624232 : 1626645 2 Enterococcus_phage(50.0%) NA NA
DBSCAN-SWA_130 1632017 : 1641564 7 Pandoravirus(25.0%) tRNA NA
DBSCAN-SWA_131 1648140 : 1663419 15 Bacillus_virus(16.67%) transposase,tRNA,protease NA
DBSCAN-SWA_132 1670331 : 1679166 6 Staphylococcus_phage(25.0%) tRNA NA
DBSCAN-SWA_133 1684681 : 1686292 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_134 1691055 : 1692201 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_135 1695396 : 1698533 2 Ectocarpus_siliculosus_virus(50.0%) NA NA
DBSCAN-SWA_136 1703709 : 1704201 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_137 1711608 : 1716632 6 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_138 1735104 : 1737128 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_139 1741897 : 1743244 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_140 1746517 : 1747396 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_141 1751823 : 1753188 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_142 1760576 : 1775097 12 Erysipelothrix_phage(12.5%) NA NA
DBSCAN-SWA_143 1791183 : 1791828 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_144 1812060 : 1812879 1 Mollivirus(100.0%) NA NA
DBSCAN-SWA_145 1829106 : 1836013 5 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_146 1840632 : 1843248 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_147 1860670 : 1867701 5 Tupanvirus(66.67%) NA NA
DBSCAN-SWA_148 1875785 : 1878323 3 Acinetobacter_phage(33.33%) NA NA
DBSCAN-SWA_149 1883411 : 1884344 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_150 1929819 : 1931430 1 Pike_perch_iridovirus(100.0%) NA NA
DBSCAN-SWA_151 1941154 : 1945603 4 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_152 1948686 : 1949922 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_153 1956324 : 1963366 4 Bacillus_phage(25.0%) tRNA NA
DBSCAN-SWA_154 1982947 : 1987952 3 Klebsiella_phage(50.0%) NA NA
DBSCAN-SWA_155 2001485 : 2003884 2 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_156 2017390 : 2018317 1 Microcystis_virus(100.0%) NA NA
DBSCAN-SWA_157 2038576 : 2040421 1 Microcystis_phage(100.0%) NA NA
DBSCAN-SWA_158 2062940 : 2073072 8 Indivirus(25.0%) NA NA
DBSCAN-SWA_159 2083890 : 2089280 5 Indivirus(33.33%) protease NA
DBSCAN-SWA_160 2093555 : 2095213 2 Streptococcus_virus(50.0%) NA NA
DBSCAN-SWA_161 2099836 : 2100907 2 Ralstonia_phage(50.0%) NA NA
DBSCAN-SWA_162 2112626 : 2114348 1 Pneumococcus_phage(100.0%) NA NA
DBSCAN-SWA_163 2125239 : 2128063 4 Paramecium_bursaria_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_164 2133573 : 2138732 4 Burkholderia_virus(25.0%) protease NA
DBSCAN-SWA_165 2144853 : 2149064 4 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_166 2157191 : 2158106 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_167 2166853 : 2167537 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_168 2175893 : 2177979 2 Leptospira_phage(50.0%) integrase attL 2167149:2167164|attR 2181796:2181811
DBSCAN-SWA_169 2190620 : 2190896 1 Burkholderia_phage(100.0%) NA NA
DBSCAN-SWA_170 2219534 : 2237281 9 Acinetobacter_phage(33.33%) protease NA
DBSCAN-SWA_171 2245662 : 2251862 8 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_172 2255038 : 2260957 4 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_173 2265775 : 2267147 2 Clostridioides_phage(100.0%) NA NA
DBSCAN-SWA_174 2271779 : 2273900 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_175 2296632 : 2298147 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_176 2306752 : 2309564 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_177 2319159 : 2320380 1 Fowlpox_virus(100.0%) NA NA
DBSCAN-SWA_178 2335480 : 2336950 1 Mollivirus(100.0%) NA NA
DBSCAN-SWA_179 2345077 : 2347317 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_180 2363696 : 2364191 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_181 2385534 : 2398781 6 Klosneuvirus(25.0%) NA NA
DBSCAN-SWA_182 2402971 : 2404162 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_183 2407226 : 2408186 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_184 2412847 : 2413936 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_185 2431093 : 2431981 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_186 2435880 : 2444372 7 Lactococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_187 2449577 : 2450504 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_188 2457151 : 2460266 4 Escherichia_phage(33.33%) NA NA
DBSCAN-SWA_189 2463356 : 2470006 7 Moraxella_phage(33.33%) NA NA
DBSCAN-SWA_190 2476560 : 2485385 4 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_191 2489583 : 2491596 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_192 2498518 : 2508581 8 Catovirus(20.0%) NA NA
DBSCAN-SWA_193 2514009 : 2520809 7 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_194 2528052 : 2536061 5 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_195 2540879 : 2542514 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_196 2551204 : 2553258 2 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_197 2558553 : 2559675 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_198 2574986 : 2575943 1 Xanthomonas_phage(100.0%) NA NA
DBSCAN-SWA_199 2596058 : 2596898 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_200 2600629 : 2613669 12 Staphylococcus_phage(40.0%) NA NA
DBSCAN-SWA_201 2622074 : 2635606 9 Burkholderia_phage(25.0%) tRNA NA
DBSCAN-SWA_202 2642780 : 2643602 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_203 2659207 : 2660332 1 uncultured_marine_virus(100.0%) NA NA
DBSCAN-SWA_204 2666944 : 2671508 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_205 2683755 : 2684547 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_206 2691607 : 2701341 11 Acinetobacter_phage(33.33%) NA NA
DBSCAN-SWA_207 2723534 : 2725067 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_208 2733871 : 2734951 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_209 2738350 : 2739274 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_210 2742311 : 2743349 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_211 2762420 : 2763215 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_212 2769538 : 2769748 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_213 2773388 : 2779072 4 Roseovarius_sp._217_phage(33.33%) NA NA
DBSCAN-SWA_214 2782342 : 2783722 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_215 2787201 : 2790392 3 Staphylococcus_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage