CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP049085	Escherichia coli strain p4A chromosome, complete genome	4 crisprs	c2c9_V-U4,RT,csa3,cas3,DEDDh,DinG,WYL	0	4	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP049085_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049085_1

2465968-2466091

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049085_1

>merge|NZ_CP049085|1|2465968-2466091|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP049085|1|1|2465968-2466091|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049085.1\|WP_000098896.1\|2469971_2471120_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP049085.1\|WP_000587585.1\|2462972_2463785_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP049085.1\|WP_001295403.1\|2455420_2456833_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_CP049085.1\|WP_001296102.1\|2460816_2461455_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP049085.1\|WP_000534260.1\|2466405_2467662_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP049085.1\|WP_000701057.1\|2475242_2476412_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP049085.1\|WP_000269498.1\|2472734_2473667_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP049085.1\|WP_000528342.1\|2457389_2457599_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP049085.1\|WP_001182336.1\|2471410_2472622_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP049085.1\|WP_000007273.1\|2476557_2477139_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP049085.1\|WP_000190985.1\|2473663_2474689_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP049085.1\|WP_000212681.1\|2465526_2465832_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP049085.1\|WP_000102278.1\|2474987_2475077_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP049085.1\|WP_001070248.1\|2458054_2458681_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP049085.1\|WP_000848170.1\|2463796_2465401_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP049085.1\|WP_000493947.1\|2469290_2469932_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP049085.1\|WP_001273524.1\|2458701_2460804_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP049085.1\|WP_001070015.1\|2462183_2462969_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP049085.1\|WP_001296101.1\|2461518_2462187_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP049085.1\|WP_001174939.1\|2467702_2469076_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981

Protein	Function_ID	Function_description	E-value
NZ_CP049085.1\|WP_000098896.1\|2469971_2471120_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP049085.1\|WP_000587585.1\|2462972_2463785_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	2.89827e-172
NZ_CP049085.1\|WP_001295403.1\|2455420_2456833_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP049085.1\|WP_001296102.1\|2460816_2461455_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	5.79235e-121
NZ_CP049085.1\|WP_000534260.1\|2466405_2467662_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP049085.1\|WP_000701057.1\|2475242_2476412_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	3.86098e-98
NZ_CP049085.1\|WP_000269498.1\|2472734_2473667_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP049085.1\|WP_000528342.1\|2457389_2457599_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_CP049085.1\|WP_001182336.1\|2471410_2472622_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP049085.1\|WP_000007273.1\|2476557_2477139_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	1.68395e-137
NZ_CP049085.1\|WP_000190985.1\|2473663_2474689_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP049085.1\|WP_000212681.1\|2465526_2465832_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	7.08279e-64
NZ_CP049085.1\|WP_001070248.1\|2458054_2458681_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	4.70639e-138
NZ_CP049085.1\|WP_000848170.1\|2463796_2465401_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP049085.1\|WP_000493947.1\|2469290_2469932_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP049085.1\|WP_001273524.1\|2458701_2460804_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP049085.1\|WP_001070015.1\|2462183_2462969_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	4.53331e-162
NZ_CP049085.1\|WP_001296101.1\|2461518_2462187_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	3.44535e-77
NZ_CP049085.1\|WP_001174939.1\|2467702_2469076_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0

>NZ_CP049085.1|WP_000212681.1|2465526_2465832_-|monooxygenase
MATLLQLHFSFNGPFGDTMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNVPLSQINQAKLA
>NZ_CP049085.1|WP_000848170.1|2463796_2465401_-|FAD-NAD(P)-binding-protein
MKTIAIVGAGPTGIYTLFSLLQQQTPLSISIFDQADEAGIGMPYSDEENSKLMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNLNLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVTFHRDNANEKLNITLMSRTGILPEADFYCPIPYEPLHIITDQALNAEIQKGEVGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEENLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPNVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGITACAEIGEAMARAVVKPASRARRRLSFD
>NZ_CP049085.1|WP_000587585.1|2462972_2463785_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERLFCSQFVRSDDHARLGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGARARVAVTGNSSRISSAGDSGRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGCAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_CP049085.1|WP_001070015.1|2462183_2462969_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPQFWPVWLIIAGLLLVGMWLVLGLHALLRARGVKKSATDHSERIYLYSKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLDRAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_CP049085.1|WP_001296101.1|2461518_2462187_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVIDNDNGTQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGVCPYQVRYLNPVTKVADKCDFCAETRLAKGFPPICVSACPEHALIFGHEDSPEIQAWLQENKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP049085.1|WP_001296102.1|2460816_2461455_+|YdhW-family-putative-oxidoreductase-system-protein
MNHQDELPLAKVSEIDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLENIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP049085.1|WP_001273524.1|2458701_2460804_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEDMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>NZ_CP049085.1|WP_001070248.1|2458054_2458681_+|ferredoxin-like-protein
MNPVDRPLLNIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKESQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP049085.1|WP_000528342.1|2457389_2457599_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP049085.1|WP_001295403.1|2455420_2456833_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP049085.1|WP_000534260.1|2466405_2467662_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEACNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGAIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDSVTFGIGNINLNGGKLWLITDAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP049085.1|WP_001174939.1|2467702_2469076_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRAAR
>NZ_CP049085.1|WP_000493947.1|2469290_2469932_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP049085.1|WP_000098896.1|2469971_2471120_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP049085.1|WP_001182336.1|2471410_2472622_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLFIGLTIFALGSLGMLWVENAATLLILRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_CP049085.1|WP_000269498.1|2472734_2473667_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALKLENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP049085.1|WP_000190985.1|2473663_2474689_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQSHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP049085.1|WP_000102278.1|2474987_2475077_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP049085.1|WP_000701057.1|2475242_2476412_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFLSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHVTPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAIVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPEAVCVANS
>NZ_CP049085.1|WP_000007273.1|2476557_2477139_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKPLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_CP049085_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049085_2

3144268-3144359

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049085_2

>merge|NZ_CP049085|2|3144268-3144359|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTTTTGAAATTACCTCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP049085|2|2|3144268-3144359|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTTTTGAAATTACCTCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049085.1\|WP_000979522.1\|3133518_3133728_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049085.1\|WP_001295943.1\|3142825_3144154_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP049085.1\|WP_001001161.1\|3141709_3142300_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP049085.1\|WP_012896765.1\|3139801_3140494_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP049085.1\|WP_001143120.1\|3145399_3145627_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP049085.1\|WP_001028098.1\|3142310_3142805_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP049085.1\|WP_000191701.1\|3137784_3138423_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP049085.1\|WP_000420625.1\|3147440_3148361_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP049085.1\|WP_001044302.1\|3145664_3146906_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP049085.1\|WP_001120112.1\|3153364_3154057_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_CP049085.1\|WP_001295944.1\|3140899_3141700_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP049085.1\|WP_001063148.1\|3149516_3152063_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_CP049085.1\|WP_001295946.1\|3138710_3139802_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_CP049085.1\|WP_000209903.1\|3148920_3149520_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP049085.1\|WP_001230247.1\|3152062_3153235_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP049085.1\|WP_001264949.1\|3154029_3155058_-\|TMAO-reductase-system-periplasmic-protein-TorT	unknown	unknown	gnl\|CDD\|236801
NZ_CP049085.1\|WP_001295947.1\|3133782_3137745_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP049085.1\|WP_000024569.1\|3148360_3148666_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP049085.1\|WP_001126780.1\|3140505_3140892_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP049085.1\|WP_001151437.1\|3144782_3145379_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647

Protein	Function_ID	Function_description	E-value
NZ_CP049085.1\|WP_001264949.1\|3154029_3155058_-\|TMAO-reductase-system-periplasmic-protein-TorT	gnl\|CDD\|236801	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional.	6.52362e-177
NZ_CP049085.1\|WP_001295943.1\|3142825_3144154_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP049085.1\|WP_001001161.1\|3141709_3142300_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	6.42763e-128
NZ_CP049085.1\|WP_012896765.1\|3139801_3140494_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	6.11512e-169
NZ_CP049085.1\|WP_001143120.1\|3145399_3145627_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_CP049085.1\|WP_001028098.1\|3142310_3142805_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	8.8278e-106
NZ_CP049085.1\|WP_000191701.1\|3137784_3138423_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.3356e-153
NZ_CP049085.1\|WP_000420625.1\|3147440_3148361_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP049085.1\|WP_001044302.1\|3145664_3146906_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP049085.1\|WP_001120112.1\|3153364_3154057_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	5.89892e-138
NZ_CP049085.1\|WP_001295944.1\|3140899_3141700_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	2.24575e-139
NZ_CP049085.1\|WP_001063148.1\|3149516_3152063_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_CP049085.1\|WP_001295946.1\|3138710_3139802_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP049085.1\|WP_000209903.1\|3148920_3149520_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	6.77311e-84
NZ_CP049085.1\|WP_001230247.1\|3152062_3153235_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP049085.1\|WP_001295947.1\|3133782_3137745_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP049085.1\|WP_000024569.1\|3148360_3148666_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	7.6018e-65
NZ_CP049085.1\|WP_001126780.1\|3140505_3140892_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_CP049085.1\|WP_001151437.1\|3144782_3145379_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133

>NZ_CP049085.1|WP_001295943.1|3142825_3144154_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKNVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGITTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNSVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQKP
>NZ_CP049085.1|WP_001028098.1|3142310_3142805_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEKALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP049085.1|WP_001001161.1|3141709_3142300_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWREPPVSDETLREIYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQYVDDAFFAGSTLKSDLLINIGYGDSSKLFARLPRLSFEEACGLL
>NZ_CP049085.1|WP_001295944.1|3140899_3141700_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLDQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINTHTRRCFQVREQLLHSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_CP049085.1|WP_001126780.1|3140505_3140892_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP049085.1|WP_012896765.1|3139801_3140494_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSSTSFARIA
>NZ_CP049085.1|WP_001295946.1|3138710_3139802_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGSGKSDFKGDFFTMDDCRVSPQPSVPMKVICAGQSDAGMAFSARYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVANVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_CP049085.1|WP_000191701.1|3137784_3138423_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_CP049085.1|WP_001295947.1|3133782_3137745_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQSLPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRQVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDNALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP049085.1|WP_000979522.1|3133518_3133728_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLINEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP049085.1|WP_001151437.1|3144782_3145379_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP049085.1|WP_001143120.1|3145399_3145627_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP049085.1|WP_001044302.1|3145664_3146906_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAATVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYKLLEQIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTERTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDRVLNEAVK
>NZ_CP049085.1|WP_000420625.1|3147440_3148361_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGTKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP049085.1|WP_000024569.1|3148360_3148666_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPSEIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_CP049085.1|WP_000209903.1|3148920_3149520_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNGLENSIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLDLLSHLHFSLGEGTVPARRIDGLRQKTLTALREWLPEFAARCRQYDSFGFYAALSQLLLVLVECDYQKR
>NZ_CP049085.1|WP_001063148.1|3149516_3152063_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVSTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFISPQDASARGIRHGDVVRVFNVRGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP049085.1|WP_001230247.1|3152062_3153235_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVATGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_CP049085.1|WP_001120112.1|3153364_3154057_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
>NZ_CP049085.1|WP_001264949.1|3154029_3155058_-|TMAO-reductase-system-periplasmic-protein-TorT
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHFTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVMTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK

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Crispr_ID: NZ_CP049085_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049085_3

3342228-3342310

Orphan

I-F

Consensus_repeat	Method
ATCTGCCTGTACGGCAGTGAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049085_3

>merge|NZ_CP049085|3|3342228-3342310|CRISPRCasFinder
ATCTGCCTGTACGGCAGTGAACTTGTCATTATTGGCAGACAGGATCCGCGGCAATTTCTAAGCTGCCTGTACGGCAGTGAACT

>NZ_CP049085|3|3|3342228-3342310|CRISPRCasFinder
ATCTGCCTGTACGGCAGTGAACT	TGTCATTATTGGCAGACAGGATCCGCGGCAATTTCTA
AGCTGCCTGTACGGCAGTGAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049085.1\|WP_001202204.1\|3338866_3340588_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP049085.1\|WP_000228473.1\|3334973_3335468_-\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP049085.1\|WP_000886683.1\|3327225_3328518_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP049085.1\|WP_000746478.1\|3347711_3348827_-\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP049085.1\|WP_000599803.1\|3349930_3351589_-\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP049085.1\|WP_001295343.1\|3329962_3330574_-\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP049085.1\|WP_000520781.1\|3344828_3345149_-\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP049085.1\|WP_001241674.1\|3340629_3341334_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP049085.1\|WP_000410785.1\|3345471_3345696_+\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NZ_CP049085.1\|WP_001040187.1\|3341618_3341837_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP049085.1\|WP_001385255.1\|3336011_3336977_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP049085.1\|WP_000488716.1\|3352013_3352709_+\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP049085.1\|WP_000077041.1\|3330732_3334839_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP049085.1\|WP_012896759.1\|3348983_3349934_+\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
NZ_CP049085.1\|WP_000188152.1\|3345768_3347715_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP049085.1\|WP_000458841.1\|3354166_3355819_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP049085.1\|WP_000934041.1\|3342521_3344798_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP049085.1\|WP_000067797.1\|3328608_3329952_-\|replication-associated-recombination-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NZ_CP049085.1\|WP_001043561.1\|3337099_3338866_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP049085.1\|WP_000491137.1\|3353123_3354023_+\|L-lysine-exporter-LysO	unknown	unknown	gnl\|CDD\|225287

Protein	Function_ID	Function_description	E-value
NZ_CP049085.1\|WP_001202204.1\|3338866_3340588_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP049085.1\|WP_000228473.1\|3334973_3335468_-\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NZ_CP049085.1\|WP_000886683.1\|3327225_3328518_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP049085.1\|WP_000746478.1\|3347711_3348827_-\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP049085.1\|WP_000599803.1\|3349930_3351589_-\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP049085.1\|WP_001295343.1\|3329962_3330574_-\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
NZ_CP049085.1\|WP_000520781.1\|3344828_3345149_-\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP049085.1\|WP_001241674.1\|3340629_3341334_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.92039e-139
NZ_CP049085.1\|WP_000410785.1\|3345471_3345696_+\|cold-shock-like-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NZ_CP049085.1\|WP_001040187.1\|3341618_3341837_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP049085.1\|WP_001385255.1\|3336011_3336977_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP049085.1\|WP_000488716.1\|3352013_3352709_+\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	7.82992e-144
NZ_CP049085.1\|WP_000077041.1\|3330732_3334839_-\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP049085.1\|WP_012896759.1\|3348983_3349934_+\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	3.94357e-131
NZ_CP049085.1\|WP_000188152.1\|3345768_3347715_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP049085.1\|WP_000458841.1\|3354166_3355819_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP049085.1\|WP_000934041.1\|3342521_3344798_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP049085.1\|WP_000067797.1\|3328608_3329952_-\|replication-associated-recombination-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP049085.1\|WP_001043561.1\|3337099_3338866_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP049085.1\|WP_000491137.1\|3353123_3354023_+\|L-lysine-exporter-LysO	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	3.40497e-117

>NZ_CP049085.1|WP_001040187.1|3341618_3341837_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP049085.1|WP_001241674.1|3340629_3341334_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCDEFIRHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLSNNFWVPRCLFSPQE
>NZ_CP049085.1|WP_001202204.1|3338866_3340588_+|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPKVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIYLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NZ_CP049085.1|WP_001043561.1|3337099_3338866_+|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLFLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQTALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP049085.1|WP_001385255.1|3336011_3336977_+|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNTDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP049085.1|WP_000228473.1|3334973_3335468_-|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP049085.1|WP_000077041.1|3330732_3334839_-|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQSTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAAEQPVQQPYYATAAEQPAQQPYYAPAPEQAVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPTRPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNTEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAQQPQYQQPQQPVTQQPQYQQPQQPVVPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP049085.1|WP_001295343.1|3329962_3330574_-|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP049085.1|WP_000067797.1|3328608_3329952_-|replication-associated-recombination-protein-RarA
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAVGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP049085.1|WP_000886683.1|3327225_3328518_-|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG
>NZ_CP049085.1|WP_000934041.1|3342521_3344798_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP049085.1|WP_000520781.1|3344828_3345149_-|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP049085.1|WP_000410785.1|3345471_3345696_+|cold-shock-like-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NZ_CP049085.1|WP_000188152.1|3345768_3347715_-|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLEWKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNATGGTEPVVNTASGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>NZ_CP049085.1|WP_000746478.1|3347711_3348827_-|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIAMVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKINDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NZ_CP049085.1|WP_012896759.1|3348983_3349934_+|DUF535-domain-containing-protein
MSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAELTFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFCS
>NZ_CP049085.1|WP_000599803.1|3349930_3351589_-|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENIPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NZ_CP049085.1|WP_000488716.1|3352013_3352709_+|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRN
>NZ_CP049085.1|WP_000491137.1|3353123_3354023_+|L-lysine-exporter-LysO
MFSGLLIILVPLIVGYLIPLRQKAALRVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSTTVILLCNIAALMWLERGLPWSNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>NZ_CP049085.1|WP_000458841.1|3354166_3355819_+|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIATLQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIIGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA

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Crispr_ID: NZ_CP049085_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049085_4

4227259-4227391

Orphan

Consensus_repeat	Method
ATCACCAATATTGAAAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP049085_4

>merge|NZ_CP049085|4|4227259-4227391|PILER-CR
ATCACCAATATTGAAAATGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGCTCCTCACCAATATTGAAAACATGGCGTAGCAAAAAGAAATTTTCAATATTGTTTTATGGATCACCAATATTGAAAG

>NZ_CP049085|4|1|4227259-4227391|PILER-CR
ATCACCAATATTGAAAA	TGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGCTC
CTCACCAATATTGAAAA	CATGGCGTAGCAAAAAGAAATTTTCAATATTGTTTTATGG
ATCACCAATATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049085.1\|WP_000203744.1\|4223820_4224108_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP049085.1\|WP_001295759.1\|4231746_4233300_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
NZ_CP049085.1\|WP_000543585.1\|4240407_4241229_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP049085.1\|WP_001183209.1\|4222430_4223762_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NZ_CP049085.1\|WP_001160964.1\|4218660_4218945_-\|CcdB-family-protein	unknown	unknown	gnl\|CDD\|376629
NZ_CP049085.1\|WP_001295758.1\|4234199_4234790_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_CP049085.1\|WP_000787105.1\|4227640_4229155_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	unknown	unknown	gnl\|CDD\|179568
NZ_CP049085.1\|WP_001295757.1\|4238803_4239952_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP049085.1\|WP_000377106.1\|4219937_4221800_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_CP049085.1\|WP_001287712.1\|4224104_4225391_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP049085.1\|WP_000624375.1\|4219266_4219746_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP049085.1\|WP_001126342.1\|4235564_4238786_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP049085.1\|WP_000692217.1\|4226397_4227168_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569
NZ_CP049085.1\|WP_001091513.1\|4225441_4226383_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
NZ_CP049085.1\|WP_000600725.1\|4221792_4222323_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
NZ_CP049085.1\|WP_000333124.1\|4234908_4235304_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154
NZ_CP049085.1\|WP_000347117.1\|4229185_4230328_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
NZ_CP049085.1\|WP_000125566.1\|4218947_4219181_-\|antitoxin	unknown	unknown	gnl\|CDD\|227619
NZ_CP049085.1\|WP_000349970.1\|4230456_4231674_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_CP049085.1\|WP_000004399.1\|4233408_4234194_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599

Protein	Function_ID	Function_description	E-value
NZ_CP049085.1\|WP_000203744.1\|4223820_4224108_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.0161e-68
NZ_CP049085.1\|WP_001295759.1\|4231746_4233300_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
NZ_CP049085.1\|WP_000543585.1\|4240407_4241229_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.6349e-141
NZ_CP049085.1\|WP_001183209.1\|4222430_4223762_-\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.5672e-59
NZ_CP049085.1\|WP_001160964.1\|4218660_4218945_-\|CcdB-family-protein	gnl\|CDD\|376629	pfam01845, CcdB, CcdB protein.	1.5415e-33
NZ_CP049085.1\|WP_001295758.1\|4234199_4234790_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	4.67383e-142
NZ_CP049085.1\|WP_000787105.1\|4227640_4229155_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
NZ_CP049085.1\|WP_001295757.1\|4238803_4239952_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP049085.1\|WP_000377106.1\|4219937_4221800_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP049085.1\|WP_001287712.1\|4224104_4225391_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP049085.1\|WP_000624375.1\|4219266_4219746_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.07206e-127
NZ_CP049085.1\|WP_001126342.1\|4235564_4238786_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP049085.1\|WP_000692217.1\|4226397_4227168_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	2.42827e-170
NZ_CP049085.1\|WP_001091513.1\|4225441_4226383_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
NZ_CP049085.1\|WP_000600725.1\|4221792_4222323_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	2.99389e-133
NZ_CP049085.1\|WP_000333124.1\|4234908_4235304_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	2.21297e-74
NZ_CP049085.1\|WP_000347117.1\|4229185_4230328_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
NZ_CP049085.1\|WP_000125566.1\|4218947_4219181_-\|antitoxin	gnl\|CDD\|227619	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only].	2.77856e-23
NZ_CP049085.1\|WP_000349970.1\|4230456_4231674_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_CP049085.1\|WP_000004399.1\|4233408_4234194_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	6.92249e-179

>NZ_CP049085.1|WP_000692217.1|4226397_4227168_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>NZ_CP049085.1|WP_001091513.1|4225441_4226383_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLSGKPDERMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLNAAVSNDASAVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>NZ_CP049085.1|WP_001287712.1|4224104_4225391_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFNGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_CP049085.1|WP_000203744.1|4223820_4224108_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKRDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_CP049085.1|WP_001183209.1|4222430_4223762_-|MFS-transporter
MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFEEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWTLPIFINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG
>NZ_CP049085.1|WP_000600725.1|4221792_4222323_-|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG
>NZ_CP049085.1|WP_000377106.1|4219937_4221800_-|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRRAFAVLLFQDIAAIPLVAMIPLLAASSASTTMGAFVLSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS
>NZ_CP049085.1|WP_000624375.1|4219266_4219746_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP049085.1|WP_000125566.1|4218947_4219181_-|antitoxin
MTAKRTTQSVTVTVDRELVNRARDAGLNMSATLTVALNAELKKHAATRWREENAEAIAALNQLADETGCFSDEYRSF
>NZ_CP049085.1|WP_001160964.1|4218660_4218945_-|CcdB-family-protein
MQFTVYRSRGRNAAFPFVIDVTSDIIGEINRRIVIPLTPIERFSRIRPPERLNPILLLIDGKEYVLMTHETATVPVNALGTKFCDASAHRTLIK
>NZ_CP049085.1|WP_000787105.1|4227640_4229155_+|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSVLVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKY
>NZ_CP049085.1|WP_000347117.1|4229185_4230328_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_CP049085.1|WP_000349970.1|4230456_4231674_+|L-carnitine-CoA-transferase
MDHLTMPKFGPLSGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMTKGKDPYYAGCGLYKCADGYIVMELVGITQIAECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_CP049085.1|WP_001295759.1|4231746_4233300_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSSGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESTWILQNSQACLLVTSAQFYPMYQQIQQEDASQLRHICLTDMALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDIYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSVRAFWGQVQKYRATVTECIPMMIRTLMVQPPSVNDRQHCLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>NZ_CP049085.1|WP_000004399.1|4233408_4234194_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_CP049085.1|WP_001295758.1|4234199_4234790_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVLAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR
>NZ_CP049085.1|WP_000333124.1|4234908_4235304_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_CP049085.1|WP_001126342.1|4235564_4238786_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>NZ_CP049085.1|WP_001295757.1|4238803_4239952_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGSWTLTGGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIALIEQYRKTAK
>NZ_CP049085.1|WP_000543585.1|4240407_4241229_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAIKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP049085_4	4.1\|4227276\|42\|NZ_CP049085\|PILER-CR	4227276-4227317	42	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141085-141126	1	0.976
NZ_CP049085_1	1.1\|2466011\|38\|NZ_CP049085\|CRISPRCasFinder	2466011-2466048	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP049085_2	2.1\|3144294\|40\|NZ_CP049085\|CRISPRCasFinder	3144294-3144333	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	2	0.95
NZ_CP049085_4	4.2\|4227335\|40\|NZ_CP049085\|PILER-CR	4227335-4227374	40	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141028-141067	2	0.95

1. spacer 4.1|4227276|42|NZ_CP049085|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.976

tgtcacacgcagataaatccaactttcaatattgttaagctc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
***************************************.**

2. spacer 1.1|2466011|38|NZ_CP049085|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

3. spacer 2.1|3144294|40|NZ_CP049085|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 2, identity: 0.95

gcgctgcgggtcatttttgaaattacctccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.***********.************

4. spacer 4.2|4227335|40|NZ_CP049085|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 2, identity: 0.95

catggcgtagcaaaaagaaattttcaatattgttttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********** *********************.*******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

843064 : 915715

Staphylococcus_phage(33.33%)

protease,integrase,tRNA,transposase

attL 854223:854240|attR 914490:914507

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096928816.1\|843064_844292_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	7.2e-168	94.4
WP_001223344.1\|844792_846883_+	bifunctional siderophore receptor/adhesin Iha	A0A0P0I887	Acinetobacter_phage	2.6e-08	31.5
WP_001296383.1\|847744_847987_+	hypothetical protein	NA	NA	NA	NA
WP_001296382.1\|848277_848637_+	hypothetical protein	NA	NA	NA	NA
WP_000266542.1\|848640_848856_+	hypothetical protein	NA	NA	NA	NA
WP_001254932.1\|853636_854788_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
854223:854240	attL	NA	NA	NA	NA
WP_001034083.1\|855384_859272_-\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	1.2e-227	39.0
WP_011076574.1\|859521_859665_+	hypothetical protein	NA	NA	NA	NA
WP_000973516.1\|860215_862417_-	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_000750130.1\|862498_863776_-	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_001015715.1\|863772_865515_-	aerobactin synthase IucC	NA	NA	NA	NA
WP_001287500.1\|865514_866462_-	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001296374.1\|866462_868187_-	aerobactin synthase IucA	NA	NA	NA	NA
WP_000074472.1\|868322_869516_+	MFS transporter	NA	NA	NA	NA
WP_001296373.1\|870233_870662_-	DUF417 family protein	NA	NA	NA	NA
WP_000109147.1\|870701_871262_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001110186.1\|871303_871564_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001513409.1\|873397_873511_+	hypothetical protein	NA	NA	NA	NA
WP_000006213.1\|875378_875612_-	Major pilus subunit operon regulatory protein	NA	NA	NA	NA
WP_001774069.1\|878103_878655_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000147017.1\|880337_881381_-	hypothetical protein	NA	NA	NA	NA
WP_001218869.1\|881636_882902_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
WP_000234526.1\|883280_883988_-	DUF554 domain-containing protein	NA	NA	NA	NA
WP_000839781.1\|884380_886516_+	ornithine decarboxylase	NA	NA	NA	NA
WP_001296363.1\|886564_887821_-	nucleoside permease NupG	NA	NA	NA	NA
WP_000760323.1\|888022_889102_-	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_000091700.1\|889166_889442_-	oxidative damage protection protein	NA	NA	NA	NA
WP_001296362.1\|889469_890522_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000786911.1\|890682_891402_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001107566.1\|891401_891728_+	YggL family protein	NA	NA	NA	NA
WP_001296361.1\|891750_891891_+	hypothetical protein	NA	NA	NA	NA
WP_000984796.1\|891911_892631_+	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_000394132.1\|892806_893853_+	L-asparaginase 2	NA	NA	NA	NA
WP_000745240.1\|893969_894977_+	DUF1202 family protein	NA	NA	NA	NA
WP_000378955.1\|895032_896334_-	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_000577034.1\|896333_896837_-	TRAP transporter small permease	NA	NA	NA	NA
WP_000783999.1\|896881_897868_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_000239963.1\|898182_899319_-	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_001174754.1\|899311_899905_-	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_001277229.1\|899912_900203_-	YggU family protein	NA	NA	NA	NA
WP_001094831.1\|900199_900766_-	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_000997795.1\|900783_901488_-	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001296360.1\|901505_902486_+	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000017111.1\|902600_903017_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_000126441.1\|903016_903652_-	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000593274.1\|903688_904639_-	glutathione synthase	NA	NA	NA	NA
WP_001222509.1\|904651_905383_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000286500.1\|905462_906170_-	deoxyribonuclease I	NA	NA	NA	NA
WP_001296359.1\|906264_906762_-\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_001112301.1\|906838_908233_-	galactose/proton symporter	NA	NA	NA	NA
WP_001062128.1\|908668_909823_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
WP_001331575.1\|910126_910342_-	hypothetical protein	NA	NA	NA	NA
WP_001297406.1\|910477_910609_+	acid stress response protein YqgB	NA	NA	NA	NA
WP_001295380.1\|910617_912594_+	biosynthetic arginine decarboxylase	NA	NA	NA	NA
WP_000758881.1\|912739_913471_+	hypothetical protein	NA	NA	NA	NA
WP_000105562.1\|913606_914527_+	agmatinase	NA	NA	NA	NA
914490:914507	attR	NA	NA	NA	NA
WP_001296354.1\|914956_915715_-\|protease	metalloprotease LoiP	NA	NA	NA	NA

DBSCAN-SWA_2

1164984 : 1172124

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001279004.1\|1164984_1165623_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	74.5
WP_000590411.1\|1165619_1166882_-	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_000847996.1\|1166878_1167787_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.9e-117	76.2
WP_001296319.1\|1167982_1168750_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	9.7e-70	57.4
WP_001141293.1\|1168800_1169457_-	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	3.3e-50	46.1
WP_000103863.1\|1169562_1172124_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8

DBSCAN-SWA_3

1240183 : 1327962

Enterobacteria_phage(33.93%)

lysis,tRNA,tail,portal,protease,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029700790.1\|1240183_1241356_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	5.1e-147	67.5
WP_001331174.1\|1241316_1241523_-	hypothetical protein	I6PBM8	Cronobacter_phage	6.9e-23	70.3
WP_001331173.1\|1241582_1241798_-	hypothetical protein	K7PLX1	Enterobacteria_phage	1.2e-14	65.1
WP_001222408.1\|1241794_1242157_-	phage protein	K7PH61	Enterobacteria_phage	2.0e-65	96.7
WP_000008249.1\|1242147_1242684_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	4.8e-100	98.9
WP_029700792.1\|1242812_1243637_-	DUF2303 family protein	K7PJQ6	Enterobacteria_phage	1.0e-149	99.3
WP_000135682.1\|1243702_1244065_-	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_000016389.1\|1244533_1244968_+	hypothetical protein	U5P096	Shigella_phage	8.4e-79	100.0
WP_000549623.1\|1244939_1245146_-	hypothetical protein	NA	NA	NA	NA
WP_000450737.1\|1245393_1246020_-	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	1.9e-47	48.8
WP_000205494.1\|1246117_1246318_+	cell division protein	NA	NA	NA	NA
WP_001250269.1\|1247083_1247263_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000104967.1\|1247252_1248194_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.3e-153	100.0
WP_142965904.1\|1248190_1248685_+	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	5.6e-87	98.8
WP_001355692.1\|1248684_1249338_+	phage N-6-adenine-methyltransferase	A0A0P0ZCC0	Stx2-converting_phage	1.1e-127	100.0
WP_000210155.1\|1249334_1249661_+	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	7.8e-53	98.1
WP_000767113.1\|1249657_1250047_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
WP_029700795.1\|1250066_1250864_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	2.6e-150	99.6
WP_001360050.1\|1250871_1251861_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.5e-195	100.0
WP_029700797.1\|1251878_1252220_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	1.6e-56	89.4
WP_001531322.1\|1252232_1252781_-	hypothetical protein	NA	NA	NA	NA
WP_000868396.1\|1252767_1253694_-	hypothetical protein	NA	NA	NA	NA
WP_029700800.1\|1253958_1254162_+	hypothetical protein	A0A291AWX6	Escherichia_phage	3.0e-31	98.5
WP_029700801.1\|1254312_1255365_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	1.4e-207	99.7
WP_000839596.1\|1255432_1255648_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135250.1\|1255647_1256145_+	lysozyme RrrD	A0A291AWW2	Escherichia_phage	4.5e-92	100.0
WP_029700804.1\|1256141_1256609_+\|lysis	lysis protein	K7PH77	Enterobacteria_phage	6.1e-75	97.4
WP_001139681.1\|1256596_1256749_+	hypothetical protein	K7PKL2	Enterobacteria_phage	4.7e-21	96.0
WP_000373425.1\|1257424_1257919_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
WP_000934127.1\|1257918_1260021_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	97.4
WP_001072975.1\|1260017_1260230_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_029700806.1\|1260229_1261738_+\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	6.6e-288	99.6
WP_001136591.1\|1261682_1263710_+\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	99.8
WP_001097050.1\|1263796_1264120_+	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_001283144.1\|1264112_1264388_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	8.6e-45	98.9
WP_029700808.1\|1264399_1264978_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.6e-101	98.4
WP_001079398.1\|1264974_1265376_+\|tail	tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
WP_000211099.1\|1265387_1266131_+	hypothetical protein	A0A291AWU6	Escherichia_phage	3.0e-132	99.6
WP_001440689.1\|1266191_1266578_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	6.1e-65	99.2
WP_001161009.1\|1266586_1266916_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_029700810.1\|1266887_1269953_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	99.2
WP_000447247.1\|1269952_1270282_+\|tail	phage tail protein	A0A291AWW9	Escherichia_phage	1.7e-60	99.1
WP_001152385.1\|1270291_1270990_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	6.0e-135	100.0
WP_064735486.1\|1270994_1271738_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.3e-147	95.1
WP_050550752.1\|1271674_1272283_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.1e-104	97.0
WP_029700815.1\|1272343_1275841_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.5
WP_029700816.1\|1275911_1276511_+	Ail/Lom family outer membrane beta-barrel protein	A5LH44	Enterobacteria_phage	4.5e-107	95.5
WP_072059871.1\|1276575_1279647_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	2.8e-67	80.7
WP_029701022.1\|1279646_1280231_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.6e-103	95.8
WP_000355482.1\|1280300_1281074_-	hypothetical protein	G9IA57	Pseudomonas_phage	4.1e-36	37.7
WP_072095179.1\|1281510_1282914_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.0e-106	50.1
WP_012602456.1\|1282948_1284163_-	type II restriction endonuclease	E5E3X4	Burkholderia_phage	7.9e-34	38.6
WP_000162574.1\|1284968_1285451_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
WP_000600193.1\|1285582_1286059_+	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_001117834.1\|1286048_1286339_+	RnfH family protein	NA	NA	NA	NA
WP_001203437.1\|1286400_1286742_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_000880939.1\|1286890_1288552_-	DNA repair protein RecN	NA	NA	NA	NA
WP_001059176.1\|1288637_1289516_-	NAD(+) kinase	NA	NA	NA	NA
WP_001296310.1\|1289638_1290232_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_010723175.1\|1290285_1291572_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001189256.1\|1291592_1292459_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_000460035.1\|1292550_1293912_+	signal recognition particle protein	NA	NA	NA	NA
WP_000256450.1\|1294048_1294297_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_000043335.1\|1294315_1294864_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000264790.1\|1294894_1295662_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000065253.1\|1295703_1296051_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_000589791.1\|1296127_1296610_-	OmpA family protein	NA	NA	NA	NA
WP_000969008.1\|1296625_1297852_-	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_001212400.1\|1297841_1298360_-	YfiR family protein	NA	NA	NA	NA
WP_001296308.1\|1298506_1298872_-	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001168045.1\|1299081_1300152_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
WP_000225212.1\|1300162_1301284_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_000200140.1\|1301326_1302487_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_001386991.1\|1302585_1302633_-	hypothetical protein	NA	NA	NA	NA
WP_000178456.1\|1302736_1303078_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_000197686.1\|1303347_1304085_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000079111.1\|1304219_1305200_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000040156.1\|1305196_1305928_+	polyphenol oxidase	NA	NA	NA	NA
WP_001235102.1\|1306057_1308631_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000852119.1\|1314418_1315717_+	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	2.4e-44	31.5
WP_001467872.1\|1315713_1316037_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_001312028.1\|1316082_1317438_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_000082935.1\|1317551_1320212_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_001296305.1\|1320243_1320942_-	DTW domain-containing protein	NA	NA	NA	NA
WP_001098726.1\|1321010_1321430_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_000997384.1\|1321636_1322674_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001262723.1\|1322721_1323411_-	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	2.1e-55	52.1
WP_000627804.1\|1323715_1324099_+	autonomous glycyl radical cofactor GrcA	A0A088FS37	Shigella_phage	4.7e-33	70.9
WP_000189207.1\|1324154_1324742_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_001296304.1\|1324844_1325726_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000219193.1\|1325758_1327093_-	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_000083664.1\|1327224_1327962_+\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA

DBSCAN-SWA_4

1709565 : 1773574

Escherichia_phage(30.77%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000849214.1\|1709565_1710054_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_000686738.1\|1710461_1710956_+	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_000557384.1\|1710945_1711209_+	chaperone NapD	NA	NA	NA	NA
WP_000778067.1\|1711205_1713692_+	periplasmic nitrate reductase subunit alpha	NA	NA	NA	NA
WP_112032056.1\|1713698_1714394_+	ferredoxin-type protein NapG	NA	NA	NA	NA
WP_000013499.1\|1714380_1715244_+	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
WP_000835174.1\|1715240_1715690_+	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
WP_000528376.1\|1715699_1716302_+	cytochrome c-type protein NapC	NA	NA	NA	NA
WP_000888560.1\|1716320_1716938_+	cytochrome c biogenesis heme-transporting ATPase CcmA	G3M9Y6	Bacillus_virus	1.9e-12	25.5
WP_000971730.1\|1716934_1717597_+	heme exporter protein CcmB	NA	NA	NA	NA
WP_001296242.1\|1717638_1718376_+	heme exporter protein CcmC	NA	NA	NA	NA
WP_000186540.1\|1718372_1718582_+	heme exporter protein CcmD	NA	NA	NA	NA
WP_001026418.1\|1718578_1719058_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_000982445.1\|1719054_1720998_+	cytochrome c-type biogenesis heme lyase CcmF	NA	NA	NA	NA
WP_000824439.1\|1720994_1721552_+	thiol:disulfide interchange protein DsbE	NA	NA	NA	NA
WP_001211575.1\|1721548_1722601_+	cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH	NA	NA	NA	NA
WP_001113641.1\|1722635_1723283_-	nitrate/nitrite response regulator protein NarP	NA	NA	NA	NA
WP_000256203.1\|1724807_1726568_-	cardiolipin transport protein PbgA	NA	NA	NA	NA
WP_001135664.1\|1726587_1726815_-	YejL family protein	NA	NA	NA	NA
WP_000050789.1\|1726996_1728004_+	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	1.5e-83	48.3
WP_000494186.1\|1728142_1728427_-	50S ribosomal protein L25	NA	NA	NA	NA
WP_000578064.1\|1728551_1730312_-	DEAD/DEAH box helicase	M4Q3N1	Vibrio_phage	4.9e-101	42.0
WP_001234850.1\|1730461_1731157_+	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA
WP_000213379.1\|1731184_1732375_+	multidrug efflux MFS transporter Bcr	S4TR35	Salmonella_phage	3.8e-20	23.7
WP_000202798.1\|1732708_1733053_+	hypothetical protein	NA	NA	NA	NA
WP_000194884.1\|1733056_1734646_-	microcin C ABC transporter ATP-binding protein YejF	G9BWD6	Planktothrix_phage	2.5e-19	33.6
WP_000088892.1\|1734647_1735673_-	ABC transporter permease	NA	NA	NA	NA
WP_000501604.1\|1735672_1736767_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_001554206.1\|1736767_1738582_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000470587.1\|1738663_1740220_-	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA
WP_000241011.1\|1740400_1740967_-	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	A0A1V0DZX6	Clostridioides_phage	4.2e-14	40.7
WP_001296239.1\|1741378_1742092_-	Kdo(2)-lipid A phosphotransferase	NA	NA	NA	NA
WP_000198798.1\|1742130_1743117_-	zinc-binding GTPase YeiR	NA	NA	NA	NA
WP_001296238.1\|1743234_1744701_-	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	2.3e-43	30.0
WP_001136827.1\|1744923_1745496_-	elongation factor P-like protein YeiP	NA	NA	NA	NA
WP_001296237.1\|1745650_1745905_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_000552003.1\|1745901_1747083_-	sugar efflux transporter SetB	NA	NA	NA	NA
WP_000487246.1\|1747450_1748581_+	fused PTS fructose transporter subunit IIA/HPr protein	NA	NA	NA	NA
WP_000091263.1\|1748580_1749519_+	1-phosphofructokinase	NA	NA	NA	NA
WP_000854422.1\|1749535_1751227_+	PTS fructose transporter subunit IIBC	NA	NA	NA	NA
WP_001207098.1\|1751682_1752624_+	pseudouridine kinase	NA	NA	NA	NA
WP_001293146.1\|1752611_1753550_+	pseudouridine-5'-phosphate glycosidase	NA	NA	NA	NA
WP_000353897.1\|1753643_1754894_+	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
WP_000658608.1\|1754960_1755659_-	transcriptional regulator YeiL	NA	NA	NA	NA
WP_000415422.1\|1755788_1756730_+	ribosylpyrimidine nucleosidase	NA	NA	NA	NA
WP_000999817.1\|1756997_1758086_-	sugar kinase	NA	NA	NA	NA
WP_000873880.1\|1758089_1758947_-	deoxyribonuclease IV	A0A1V0SBL9	Catovirus	3.1e-24	35.0
WP_000182056.1\|1759020_1760070_-	YeiH family protein	NA	NA	NA	NA
WP_000548294.1\|1760168_1761050_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_112032052.1\|1761254_1762724_+	lysine-specific permease	NA	NA	NA	NA
WP_001067855.1\|1764722_1765427_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_063840321.1\|1765570_1766125_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_001334766.1\|1766255_1767086_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_001067855.1\|1767717_1768422_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000557452.1\|1768528_1769389_+	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
WP_165696372.1\|1769401_1769944_+	AAA family ATPase	NA	NA	NA	NA
WP_165587319.1\|1770035_1771191_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.8e-17	33.6
WP_001067855.1\|1771137_1771842_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|1772869_1773574_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_5

1788439 : 1797884

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001292786.1\|1788439_1789576_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	6.1e-161	96.7
WP_001296230.1\|1789572_1791576_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001296231.1\|1791700_1792162_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001295430.1\|1792202_1792673_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|1792719_1793439_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|1793435_1795121_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240408.1\|1795342_1796074_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	6.3e-111	98.5
WP_001216963.1\|1796133_1796241_+	protein YohO	NA	NA	NA	NA
WP_000783109.1\|1796221_1796953_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569347.1\|1796957_1797884_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.3e-23	30.8

DBSCAN-SWA_6

1909343 : 1915646

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001116066.1\|1909343_1910738_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	6.3e-19	33.0
WP_000183040.1\|1910912_1911806_+	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	3.0e-46	42.0
WP_000699407.1\|1912178_1913264_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.8e-101	53.9
WP_001023641.1\|1913263_1914163_+	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	1.7e-28	34.8
WP_000857525.1\|1914220_1915099_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.6e-107	64.5
WP_001100793.1\|1915103_1915646_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.0e-50	61.8

DBSCAN-SWA_7

1938793 : 1975091

Stx2-converting_phage(21.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001531805.1\|1938793_1939252_+\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	1.2e-11	31.5
WP_000980556.1\|1939362_1940790_-	exodeoxyribonuclease I	NA	NA	NA	NA
WP_001296209.1\|1940998_1942165_+	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	5.9e-228	99.5
WP_001105368.1\|1942283_1942757_+	DNA gyrase inhibitor SbmC	NA	NA	NA	NA
WP_001200889.1\|1942954_1944013_+	FUSC family protein	NA	NA	NA	NA
WP_000450409.1\|1944184_1944514_+	DUF496 family protein	NA	NA	NA	NA
WP_001296208.1\|1944614_1944797_-	hypothetical protein	NA	NA	NA	NA
WP_001161660.1\|1945285_1945399_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_000988600.1\|1945411_1945606_-	hypothetical protein	NA	NA	NA	NA
WP_000854815.1\|1945602_1945977_-	type IV toxin-antitoxin system toxin CbtA	NA	NA	NA	NA
WP_001280918.1\|1946065_1946434_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000086752.1\|1946449_1947094_-	hypothetical protein	A0A2I6PI07	Pseudomonas_phage	1.8e-24	32.9
WP_000692345.1\|1947112_1947334_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_001186200.1\|1947396_1947873_-	RadC family protein	NA	NA	NA	NA
WP_001542276.1\|1947888_1948362_-	antirestriction protein	A0A2D0W9W4	Bordetella_phage	4.3e-12	33.1
WP_001164966.1\|1948455_1948701_-	hypothetical protein	NA	NA	NA	NA
WP_001542275.1\|1948700_1949519_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	8.8e-45	38.6
WP_000846703.1\|1949739_1950150_-	hypothetical protein	NA	NA	NA	NA
WP_001016257.1\|1950598_1951345_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
WP_001298859.1\|1951359_1952901_-\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
WP_001542273.1\|1953015_1953429_-	hypothetical protein	NA	NA	NA	NA
WP_000102633.1\|1953564_1954635_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_000203551.1\|1954631_1955537_-	chemotaxis protein	NA	NA	NA	NA
WP_001531797.1\|1955533_1957918_-	hypothetical protein	NA	NA	NA	NA
WP_001069649.1\|1958135_1958570_-	hypothetical protein	NA	NA	NA	NA
WP_000856948.1\|1958998_1961164_+	TonB-dependent receptor	NA	NA	NA	NA
WP_000778018.1\|1961174_1962164_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000217077.1\|1962182_1963241_+	iron ABC transporter permease	NA	NA	NA	NA
WP_000016207.1\|1963237_1964005_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.5e-14	27.9
WP_001163787.1\|1964058_1964316_+	hypothetical protein	NA	NA	NA	NA
WP_000080195.1\|1964690_1966304_-\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
WP_000624722.1\|1966334_1966685_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_000422741.1\|1966681_1967107_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_001296206.1\|1967386_1968532_-	hypothetical protein	NA	NA	NA	NA
WP_089438313.1\|1969731_1969911_-\|transposase	transposase	NA	NA	NA	NA
WP_000255956.1\|1970056_1971079_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-199	99.1
WP_000970353.1\|1971078_1971771_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.7e-118	88.4
WP_000813432.1\|1972796_1973399_-	hypothetical protein	NA	NA	NA	NA
WP_001304240.1\|1973492_1973771_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_001296203.1\|1973894_1975091_-\|transposase	IS110-like element ISEc20 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

2041980 : 2118889

Shigella_phage(33.33%)

integrase,lysis,head,holin,tail,transposase,portal,protease,plate,capsid,terminase

attL 2023782:2023797|attR 2053811:2053826

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2023782:2023797	attL	NA	NA	NA	NA
WP_000060157.1\|2041980_2043243_-\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	2.6e-72	38.5
WP_001311896.1\|2043580_2044378_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_021562665.1\|2044613_2045639_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	3.4e-102	57.9
WP_021562666.1\|2045638_2045842_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_021562667.1\|2045900_2048375_-	exonuclease	K7PLW7	Enterobacteria_phage	2.7e-57	58.2
WP_021562668.1\|2048454_2048658_-	DUF1482 family protein	NA	NA	NA	NA
WP_000450218.1\|2048654_2048843_-	cell division inhibitor	NA	NA	NA	NA
WP_000935598.1\|2048853_2049708_-	hypothetical protein	A0A0P0ZE80	Stx2-converting_phage	2.1e-65	63.2
WP_021562669.1\|2050246_2050621_-	hypothetical protein	NA	NA	NA	NA
WP_021562670.1\|2050632_2050785_-	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_000787428.1\|2050992_2051400_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_000912294.1\|2051476_2051704_+	transcriptional regulator	NA	NA	NA	NA
WP_000705383.1\|2051687_2052239_+	hypothetical protein	NA	NA	NA	NA
WP_021562672.1\|2052210_2053251_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	5.1e-90	86.7
WP_001309414.1\|2053162_2053705_+	hypothetical protein	A0A0U2JGJ0	Escherichia_phage	3.6e-79	90.2
WP_042091266.1\|2053738_2054509_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.8e-87	68.8
2053811:2053826	attR	NA	NA	NA	NA
WP_001141099.1\|2054524_2054917_+	DUF977 family protein	A0A088CBK9	Shigella_phage	1.5e-39	63.3
WP_001266130.1\|2054913_2055210_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.2e-47	95.8
WP_001209471.1\|2055206_2055668_+	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	3.8e-37	91.7
WP_000403778.1\|2055645_2056002_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.1e-57	98.3
WP_029701087.1\|2056095_2056278_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	3.1e-27	98.3
WP_000753058.1\|2056270_2056447_+	hypothetical protein	A0A2R2X2A8	Escherichia_phage	4.3e-26	93.1
WP_001289994.1\|2056443_2056959_+	hypothetical protein	A0A076GCN9	Escherichia_phage	1.2e-36	77.6
WP_001336454.1\|2057040_2057259_+	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|2057517_2057673_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_000980988.1\|2057889_2058141_+	hypothetical protein	NA	NA	NA	NA
WP_001405664.1\|2058207_2058486_+	hypothetical protein	A0A077KB22	Edwardsiella_phage	5.1e-05	37.1
WP_078175510.1\|2058487_2059480_+	DUF968 domain-containing protein	S5FV02	Shigella_phage	2.3e-156	80.6
WP_021562675.1\|2059494_2060073_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	6.2e-45	53.3
WP_021562676.1\|2060212_2061604_+	ATP-binding protein	NA	NA	NA	NA
WP_001120503.1\|2061700_2062036_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	5.7e-59	98.2
WP_001166530.1\|2062039_2062516_+	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	8.6e-85	97.4
WP_000092300.1\|2062512_2062980_+\|lysis	lysis protein	A0A192Y689	Salmonella_phage	1.8e-66	84.5
WP_071813842.1\|2063349_2063694_+	DUF2441 domain-containing protein	I6PCV9	Cronobacter_phage	5.9e-27	47.3
WP_001566776.1\|2063765_2064116_+	HNH endonuclease	M1FQV2	Enterobacteria_phage	2.1e-64	98.3
WP_001566775.1\|2064241_2064736_+\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	1.6e-86	97.6
WP_064760988.1\|2064969_2066466_+\|terminase	terminase large subunit	A0A1C9IIA1	Salmonella_phage	4.1e-290	98.8
WP_001566773.1\|2066462_2066624_+	hypothetical protein	NA	NA	NA	NA
WP_001566771.1\|2066613_2067840_+\|portal	phage portal protein	Q8SBI0	Shigella_phage	3.0e-230	95.3
WP_000999828.1\|2067832_2068432_+\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.9e-89	81.0
WP_001566770.1\|2068446_2069664_+\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	2.2e-161	71.6
WP_000924830.1\|2069741_2070065_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	2.2e-52	99.1
WP_001566769.1\|2070061_2070472_+\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	2.2e-68	92.6
WP_000224835.1\|2070446_2070953_+	hypothetical protein	M1FPE2	Enterobacteria_phage	1.3e-83	92.9
WP_001566768.1\|2070949_2071510_+	hypothetical protein	M1FQV7	Enterobacteria_phage	9.8e-104	97.8
WP_000497751.1\|2071518_2071689_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
WP_001566767.1\|2071672_2073169_+\|tail	phage tail sheath protein	S5FKL0	Shigella_phage	7.5e-276	98.8
WP_000090998.1\|2073168_2073525_+	hypothetical protein	U5P076	Shigella_phage	5.3e-63	100.0
WP_000571713.1\|2073521_2073845_+\|tail	phage tail assembly protein	U5P0R5	Shigella_phage	1.1e-51	99.1
WP_001566766.1\|2073929_2075831_+\|tail	phage tail tape measure protein	U5P420	Shigella_phage	0.0e+00	99.1
WP_001566765.1\|2075895_2076384_+	hypothetical protein	NA	NA	NA	NA
WP_001566763.1\|2076440_2077814_+\|tail	phage tail/DNA circulation protein	U5P4I0	Shigella_phage	1.5e-243	97.3
WP_001566762.1\|2077810_2078890_+	hypothetical protein	U5P0H6	Shigella_phage	7.7e-206	99.4
WP_021562678.1\|2078889_2079438_+\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	3.3e-96	98.4
WP_000424732.1\|2079437_2079863_+	hypothetical protein	U5P0R9	Shigella_phage	2.3e-81	100.0
WP_001566759.1\|2079849_2080908_+\|plate	baseplate J/gp47 family protein	M1FQW3	Enterobacteria_phage	2.5e-201	99.1
WP_001566758.1\|2080898_2081483_+	YmfQ family protein	O22003	Shigella_phage	4.6e-112	99.0
WP_021562679.1\|2081486_2083862_+\|tail	tail fiber domain-containing protein	O22004	Shigella_phage	1.1e-47	71.8
WP_001007778.1\|2085321_2085972_-	metal-binding protein ZinT	NA	NA	NA	NA
WP_099156434.1\|2086232_2087580_+\|transposase	IS3-like element IS1397 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
WP_001240063.1\|2087664_2088300_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_000740067.1\|2088300_2089305_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_000920127.1\|2089413_2089827_-	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_001347103.1\|2089959_2090631_+	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
WP_000826711.1\|2090630_2091989_+	two-component system sensor histidine kinase HprS	NA	NA	NA	NA
WP_000218217.1\|2092096_2092948_-	protein deglycase HchA	NA	NA	NA	NA
WP_000824383.1\|2093540_2094656_-	outer membrane protein F	Q1MVN1	Enterobacteria_phage	2.9e-91	47.4
WP_001330593.1\|2095221_2095587_+	hypothetical protein	NA	NA	NA	NA
WP_001296176.1\|2095626_2096322_+	phosphohydrolase	S4W232	Pandoravirus	1.6e-07	28.7
WP_001157265.1\|2096388_2097807_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-101	55.1
WP_000228686.1\|2097787_2098258_+	VSPR family DNA mismatch endonuclease	E5E3X5	Burkholderia_phage	5.2e-34	48.3
WP_001212226.1\|2098246_2099167_-	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000922683.1\|2099339_2100257_+	DUF808 domain-containing protein	NA	NA	NA	NA
WP_000009307.1\|2100335_2100518_+	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_001531784.1\|2100688_2102383_+	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.3e-18	35.6
WP_000491527.1\|2102379_2103195_-	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_000844800.1\|2103490_2103718_-	peroxide/acid resistance protein YodD	NA	NA	NA	NA
WP_071524607.1\|2103826_2104069_+	protein DsrB	NA	NA	NA	NA
WP_000103992.1\|2104112_2104736_-	transcriptional regulator RcsA	NA	NA	NA	NA
WP_000983988.1\|2105025_2105811_-	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_000187358.1\|2105819_2106089_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_001253318.1\|2106098_2106836_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_001313947.1\|2106835_2107201_-	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001282103.1\|2107203_2107617_-	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_001295641.1\|2107613_2108618_-	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_000133106.1\|2108622_2109087_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_000620069.1\|2109191_2110319_-	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_000807584.1\|2110315_2110759_-	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_000213308.1\|2110777_2112151_-	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_001282677.1\|2112150_2112837_-	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000067950.1\|2112829_2113825_-	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_000994425.1\|2113817_2115476_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
WP_001274299.1\|2115690_2116005_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_001070440.1\|2116348_2116681_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_001310919.1\|2116849_2117401_+	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_000879824.1\|2117410_2118208_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001347174.1\|2118364_2118889_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.2e-33	60.0

DBSCAN-SWA_9

2137133 : 2270686

157

Enterobacteria_phage(36.46%)

integrase,lysis,head,tRNA,holin,tail,portal,plate,capsid,terminase

attL 2166792:2166809|attR 2276885:2276902

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001531780.1\|2137133_2138150_-\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	1.1e-126	63.6
WP_000833838.1\|2138118_2138382_-	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	1.2e-06	38.0
WP_000916334.1\|2138591_2138774_-	hypothetical protein	NA	NA	NA	NA
WP_078175506.1\|2138773_2139343_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	6.1e-37	49.2
WP_000151806.1\|2139339_2141556_-	hypothetical protein	H9C157	Pectobacterium_phage	4.7e-101	35.6
WP_000388260.1\|2141586_2141907_-	hypothetical protein	NA	NA	NA	NA
WP_001296165.1\|2142917_2143331_-	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.7e-09	49.1
WP_000360804.1\|2143429_2143660_+	transcriptional regulator	H6WRX5	Salmonella_phage	1.5e-21	63.2
WP_000431205.1\|2143718_2144195_+	hypothetical protein	H9C162	Pectobacterium_phage	1.9e-23	48.6
WP_000943914.1\|2144234_2144459_+	hypothetical protein	H9C163	Pectobacterium_phage	6.1e-17	54.1
WP_001023813.1\|2144455_2145211_+	hypothetical protein	H9C164	Pectobacterium_phage	2.4e-41	68.5
WP_000609322.1\|2145200_2146616_+	AAA family ATPase	H9C165	Pectobacterium_phage	6.6e-173	66.7
WP_000214056.1\|2146654_2147065_+	hypothetical protein	NA	NA	NA	NA
WP_000918616.1\|2147066_2147303_+	hypothetical protein	NA	NA	NA	NA
WP_000875806.1\|2147299_2147611_+	hypothetical protein	A0A222YXX1	Escherichia_phage	1.2e-34	65.7
WP_000661082.1\|2147607_2147832_+	hypothetical protein	NA	NA	NA	NA
WP_001531776.1\|2148513_2149302_+	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	1.1e-39	69.8
WP_001237642.1\|2149476_2150400_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_000536231.1\|2151587_2152286_+	hypothetical protein	Q858R8	Enterobacteria_phage	1.5e-117	91.4
WP_001138663.1\|2152748_2153354_-	hypothetical protein	NA	NA	NA	NA
WP_000224749.1\|2153363_2153852_-	ImmA/IrrE family metallo-endopeptidase	A0A142KB62	Gordonia_phage	6.4e-27	42.7
WP_000536919.1\|2154250_2154484_-	hypothetical protein	NA	NA	NA	NA
WP_000847617.1\|2154727_2155369_+	hypothetical protein	NA	NA	NA	NA
WP_001025459.1\|2155520_2155700_+	hypothetical protein	NA	NA	NA	NA
WP_000057010.1\|2155777_2156374_+	DUF1367 family protein	H9C173	Pectobacterium_phage	1.5e-70	64.1
WP_000717783.1\|2156370_2156664_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.3e-34	70.5
WP_000064384.1\|2156663_2157335_+	antitermination protein	Q7Y3X2	Yersinia_phage	1.9e-16	33.5
WP_001294589.1\|2157447_2157831_+	hypothetical protein	NA	NA	NA	NA
WP_000172496.1\|2157830_2158103_+\|holin	phage holin family protein	A0A0A0YPY6	Escherichia_phage	9.8e-09	42.9
WP_000131873.1\|2158102_2158582_+	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	4.6e-62	68.8
WP_000734931.1\|2158589_2158784_+	hypothetical protein	NA	NA	NA	NA
WP_001531775.1\|2158843_2159089_-	hypothetical protein	NA	NA	NA	NA
WP_000168117.1\|2159457_2160024_+	hypothetical protein	A0A1I9KFT4	Aeromonas_phage	2.9e-31	46.2
WP_000148195.1\|2160010_2161873_+\|terminase	phage terminase large subunit family protein	A0A1I9KF19	Aeromonas_phage	1.1e-191	53.2
WP_000203897.1\|2161872_2162106_+	hypothetical protein	NA	NA	NA	NA
WP_000126513.1\|2162102_2163677_+\|portal	phage portal protein	E4WL21	Enterobacteria_phage	8.6e-190	64.0
WP_001145892.1\|2163676_2164984_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	4.9e-106	53.7
WP_000206292.1\|2164983_2165313_+	hypothetical protein	A0A2R9YJN3	Escherichia_phage	2.0e-08	39.5
WP_001283997.1\|2165371_2166406_+\|capsid	major capsid protein	A0A2I6TCE5	Escherichia_phage	6.6e-106	56.5
WP_000105179.1\|2166440_2166860_+	DNA-packaging protein	NA	NA	NA	NA
2166792:2166809	attL	NA	NA	NA	NA
WP_001531773.1\|2166856_2167237_+	hypothetical protein	NA	NA	NA	NA
WP_000774516.1\|2167268_2167949_+	hypothetical protein	NA	NA	NA	NA
WP_000015612.1\|2167945_2168482_+	hypothetical protein	NA	NA	NA	NA
WP_000079174.1\|2168462_2169365_+\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_000901289.1\|2169367_2169709_+\|plate	phage baseplate assembly protein	D4HTV2	Vibrio_phage	1.1e-20	51.6
WP_000633314.1\|2169705_2170626_+\|plate	baseplate assembly protein	D5LGZ3	Escherichia_phage	6.4e-68	47.8
WP_000203868.1\|2170628_2171255_+\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	2.0e-25	38.8
WP_000829621.1\|2171247_2172432_+\|tail	phage tail protein	J9QDX3	Clostridium_phage	2.5e-16	35.2
WP_000626358.1\|2172431_2172821_+	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	9.4e-05	30.8
WP_000117510.1\|2172817_2174320_+\|tail	tail sheath protein	R9TMQ0	Vibrio_phage	5.5e-69	33.5
WP_000785563.1\|2174337_2174850_+\|tail	phage tail protein	NA	NA	NA	NA
WP_000444667.1\|2174862_2175144_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001018353.1\|2175252_2176893_+	hypothetical protein	A0A2I7R3J9	Vibrio_phage	1.2e-19	29.3
WP_001531768.1\|2176928_2177318_+\|tail	phage tail protein	E5FFG4	Burkholderia_phage	1.0e-14	37.9
WP_001531767.1\|2177479_2177704_+	hypothetical protein	NA	NA	NA	NA
WP_001296152.1\|2178918_2179338_+	hypothetical protein	G8C7Q7	Escherichia_phage	1.8e-49	68.8
WP_000847882.1\|2179809_2180475_+	UPF0149 family protein YecA	NA	NA	NA	NA
WP_000797555.1\|2180525_2181737_-	tyrosine transporter TyrP	NA	NA	NA	NA
WP_000377224.1\|2181927_2182167_+	YecH family protein	NA	NA	NA	NA
WP_000917208.1\|2182204_2182702_-	non-heme ferritin	NA	NA	NA	NA
WP_001237881.1\|2182873_2183197_-	hypothetical protein	NA	NA	NA	NA
WP_010723106.1\|2183460_2183547_+	stress response protein AzuC	NA	NA	NA	NA
WP_000082127.1\|2183661_2183913_+	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_000179469.1\|2183990_2184494_-	non-heme ferritin-like protein	NA	NA	NA	NA
WP_000548680.1\|2185288_2186278_+	arabinose ABC transporter substrate-binding protein AraF	NA	NA	NA	NA
WP_001187827.1\|2186347_2187862_+	arabinose ABC transporter ATP binding protein AraG	A0A285PWH2	Cedratvirus	1.3e-12	29.7
WP_000100203.1\|2187876_2188863_+	arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_001296149.1\|2189029_2189830_+	trehalose-phosphatase	NA	NA	NA	NA
WP_001296148.1\|2189804_2191229_+	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_000122413.1\|2191235_2191664_-	universal stress protein UspC	NA	NA	NA	NA
WP_001295647.1\|2192443_2192794_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_001291603.1\|2192796_2193375_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_000906342.1\|2193501_2194389_+	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_000795641.1\|2194385_2195312_+	flagellar motor protein MotB	NA	NA	NA	NA
WP_001531763.1\|2195316_2197281_+	chemotaxis protein CheA	NA	NA	NA	NA
WP_000147302.1\|2197301_2197805_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_001296146.1\|2197949_2199611_+	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
WP_000204320.1\|2199901_2200762_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_000036371.1\|2200764_2201814_+	protein-glutamate methylesterase/protein glutamine deamidase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
WP_000763867.1\|2201828_2202218_+	chemotaxis protein CheY	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
WP_000983600.1\|2202228_2202873_+	protein phosphatase CheZ	NA	NA	NA	NA
WP_001278946.1\|2203061_2204210_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_000066973.1\|2204202_2206281_+	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_001202076.1\|2206280_2206673_+	flagellar protein FlhE	NA	NA	NA	NA
WP_001025326.1\|2206725_2208459_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7
WP_001490174.1\|2208674_2209241_+	VOC family protein	NA	NA	NA	NA
WP_001185734.1\|2209254_2210001_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001214293.1\|2210388_2211489_+	cytochrome c	NA	NA	NA	NA
WP_000176764.1\|2211513_2213943_+	trimethylamine N-oxide reductase TorZ	NA	NA	NA	NA
WP_000564759.1\|2213978_2214950_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_000019588.1\|2214946_2215690_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_000252980.1\|2215730_2216126_-	hypothetical protein	NA	NA	NA	NA
WP_042040108.1\|2216178_2216949_-	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.1e-72	99.2
WP_000362005.1\|2216930_2218244_-\|integrase	site-specific integrase	Q8W658	Enterobacteria_phage	4.1e-246	95.6
WP_000528718.1\|2218299_2218536_-	excisionase family protein	Q8W657	Enterobacteria_phage	6.4e-41	100.0
WP_001030156.1\|2218544_2218691_-	hypothetical protein	A0A1B5FPC2	Escherichia_phage	1.6e-21	93.8
WP_000457723.1\|2218694_2218937_-	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	4.3e-32	87.5
WP_021519728.1\|2219021_2219366_-	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	1.4e-57	98.2
WP_021519727.1\|2219362_2219530_-	hypothetical protein	A0A192Y7X3	Salmonella_phage	3.6e-14	80.8
WP_000224227.1\|2219540_2219804_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_021519726.1\|2219805_2220216_-	hypothetical protein	C6ZR27	Salmonella_phage	2.7e-18	49.6
WP_021519725.1\|2220217_2221033_-	ead/Ea22-like family protein	A0A2I6TD51	Escherichia_phage	1.3e-141	96.4
WP_021519724.1\|2221019_2221334_-	hypothetical protein	B1GS43	Salmonella_phage	2.8e-39	86.0
WP_000179800.1\|2221287_2221605_-	DUF4752 family protein	A0A1I9LJV1	Stx_converting_phage	5.2e-38	82.6
WP_001199104.1\|2221853_2222435_-	hypothetical protein	Q8W653	Enterobacteria_phage	1.9e-70	65.1
WP_021519723.1\|2222440_2222623_-	hypothetical protein	Q8W652	Enterobacteria_phage	2.9e-09	50.9
WP_021519722.1\|2222817_2223024_-	hypothetical protein	Q8W651	Enterobacteria_phage	2.0e-30	95.6
WP_000608402.1\|2223311_2223815_-	helix-turn-helix domain-containing protein	Q8W649	Enterobacteria_phage	1.2e-63	95.5
WP_000838344.1\|2223918_2224575_-	helix-turn-helix domain-containing protein	Q8W648	Enterobacteria_phage	3.1e-125	97.7
WP_001090259.1\|2224910_2225618_+	DNA-binding protein	Q8W645	Enterobacteria_phage	9.1e-107	86.0
WP_029700954.1\|2225726_2226389_+	hypothetical protein	Q8W643	Enterobacteria_phage	4.7e-97	84.9
WP_029700955.1\|2226385_2227237_+	hypothetical protein	Q8HA97	Salmonella_phage	1.9e-103	68.9
WP_000626792.1\|2227233_2227428_+	hypothetical protein	NA	NA	NA	NA
WP_000618007.1\|2227424_2227649_+	hypothetical protein	NA	NA	NA	NA
WP_000092417.1\|2227941_2228928_+	hypothetical protein	Q8W642	Enterobacteria_phage	1.7e-55	96.3
WP_000988266.1\|2228938_2229838_+	ATP-binding protein	Q8W641	Enterobacteria_phage	2.3e-139	94.8
WP_029700958.1\|2229834_2231235_+	replicative DNA helicase	Q8W640	Enterobacteria_phage	3.0e-250	93.9
WP_001520742.1\|2231231_2231489_+	hypothetical protein	Q8W639	Enterobacteria_phage	4.4e-35	100.0
WP_001205451.1\|2231488_2231857_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	2.2e-56	90.0
WP_001025378.1\|2231920_2232961_+	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	9.3e-100	50.9
WP_000052342.1\|2232929_2233619_-	hypothetical protein	NA	NA	NA	NA
WP_000209290.1\|2233621_2234779_-	DUF262 domain-containing protein	A0A0R6PJX3	Moraxella_phage	2.3e-59	37.4
WP_000917767.1\|2235032_2235230_+	hypothetical protein	Q9MC00	Enterobacteria_phage	2.1e-29	100.0
WP_000284510.1\|2237413_2237629_+\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_000193280.1\|2237633_2237984_+	YdfR family protein	K7PGU6	Enterobacteria_phage	2.9e-37	95.2
WP_016248004.1\|2238047_2238581_+	lysozyme	Q6H9V6	Enterobacteria_phage	2.5e-101	96.6
WP_001082546.1\|2238879_2239347_+\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	3.4e-78	99.4
WP_000347013.1\|2239697_2239838_+	hypothetical protein	NA	NA	NA	NA
WP_001329960.1\|2239970_2240156_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	3.2e-19	90.4
WP_001102145.1\|2240543_2241092_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	6.1e-58	82.7
WP_094083981.1\|2241021_2242992_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	2.1e-262	67.5
WP_000259002.1\|2242975_2243182_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_029701046.1\|2243178_2244771_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.2e-184	60.9
WP_001253935.1\|2244760_2246266_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.6e-100	53.5
WP_000256835.1\|2246302_2246650_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.9e-21	55.9
WP_000522601.1\|2246707_2247736_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.1e-113	62.2
WP_000201501.1\|2247787_2248171_+	DNA-packaging protein FI	NA	NA	NA	NA
WP_001402971.1\|2248163_2248517_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	9.6e-41	69.2
WP_001575631.1\|2248531_2249107_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.1e-49	57.8
WP_000683079.1\|2249103_2249499_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000235110.1\|2249506_2250259_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.2e-133	98.4
WP_000479095.1\|2250272_2250704_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.2e-42	68.8
WP_000533402.1\|2250730_2251144_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_023909007.1\|2251124_2253698_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.3
WP_000847298.1\|2253694_2254024_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_033561175.1\|2254023_2254722_+\|tail	phage minor tail protein L	B6DZB1	Enterobacteria_phage	6.4e-129	96.1
WP_000194723.1\|2254732_2255476_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	5.0e-148	98.0
WP_122997661.1\|2255421_2256054_+\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	1.5e-100	94.3
WP_134163207.1\|2257525_2259871_+	host specificity protein J	Q9EYE7	Enterobacteria_phage	0.0e+00	98.6
WP_001228314.1\|2259938_2260538_+	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	9.1e-108	97.0
WP_106493736.1\|2260688_2263715_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	7.2e-68	82.1
WP_000631346.1\|2263711_2264614_+\|tail	tail protein	A0A0M4QWS3	Salmonella_phage	4.0e-99	63.9
WP_029701058.1\|2264622_2265207_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.5e-102	94.3
WP_029701056.1\|2265319_2266690_-	reverse transcriptase	NA	NA	NA	NA
WP_000545005.1\|2266667_2267219_-	SLATT domain-containing protein	NA	NA	NA	NA
WP_000891625.1\|2268037_2268604_-	hydrolase	NA	NA	NA	NA
WP_001258676.1\|2268913_2270686_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
2276885:2276902	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2767591 : 2837308

Stx2-converting_phage(24.56%)

integrase,head,holin,tail,transposase,portal,protease,capsid,terminase

attL 2796479:2796493|attR 2838272:2838286

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000422062.1\|2767591_2768641_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5
WP_000559273.1\|2768860_2769619_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	4.4e-06	23.4
WP_001278898.1\|2769615_2770206_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_001000715.1\|2770262_2770571_-	hypothetical protein	NA	NA	NA	NA
WP_000622024.1\|2770580_2771603_-	hypothetical protein	NA	NA	NA	NA
WP_001291206.1\|2771772_2772648_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_001296033.1\|2772860_2774756_-	DUF2207 domain-containing protein	NA	NA	NA	NA
WP_001295575.1\|2774783_2775404_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_001285702.1\|2775400_2776282_-	5'-3' exoribonuclease	NA	NA	NA	NA
WP_001700591.1\|2776419_2776464_+	trp operon leader peptide	NA	NA	NA	NA
WP_001194644.1\|2776555_2778118_+	anthranilate synthase component I	NA	NA	NA	NA
WP_000763535.1\|2778117_2779713_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
WP_001195273.1\|2779716_2781075_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.9e-37	41.2
WP_000209513.1\|2781086_2782280_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_000443082.1\|2782279_2783086_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_001296031.1\|2783461_2783737_+	hypothetical protein	S5MQL6	Escherichia_phage	1.1e-10	52.9
WP_001348267.1\|2783733_2784291_+	Rha family transcriptional regulator	Q8H9L9	Vibrio_phage	4.2e-30	63.8
WP_000251936.1\|2784417_2784588_-	hypothetical protein	A0A0U2RK60	Escherichia_phage	9.4e-10	62.5
WP_000937495.1\|2784702_2784972_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	9.3e-20	79.4
WP_000240999.1\|2785028_2785697_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_001421220.1\|2785895_2786078_-	recombinase family protein	A0A0C4UR34	Shigella_phage	1.4e-24	95.0
WP_022645053.1\|2786305_2787091_+	hypothetical protein	Q858V4	Yersinia_virus	1.3e-109	77.8
WP_000972097.1\|2787092_2787626_+\|tail	tail fiber assembly protein	A0A077SL44	Escherichia_phage	1.8e-67	70.1
WP_001164137.1\|2787656_2788184_-\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	8.4e-73	77.7
WP_071550361.1\|2788199_2791106_-	hypothetical protein	A0A0F7LDR4	Escherichia_phage	1.1e-118	45.9
WP_001016257.1\|2791567_2792314_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
WP_001298859.1\|2792328_2793870_-\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
WP_000514710.1\|2794512_2797986_-	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.7
2796479:2796493	attL	NA	NA	NA	NA
WP_061089814.1\|2798328_2798961_-\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	3.0e-101	97.6
WP_000194730.1\|2798906_2799650_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	4.3e-147	97.6
WP_001296027.1\|2799660_2800359_-\|tail	phage minor tail protein L	B6DZB1	Enterobacteria_phage	5.8e-130	97.4
WP_000807937.1\|2800358_2800700_-\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	9.0e-60	95.6
WP_000212991.1\|2800692_2803935_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	91.6
WP_001513217.1\|2803982_2804192_-	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	1.5e-33	100.0
WP_000710949.1\|2804287_2804662_-\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	1.7e-64	99.2
WP_001275441.1\|2804676_2805393_-\|tail	tail protein	A0A0P0ZDV1	Stx2-converting_phage	3.6e-127	99.6
WP_000133388.1\|2805459_2805804_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
WP_000573391.1\|2805800_2806247_-	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_001007905.1\|2806243_2806594_-\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000125990.1\|2806603_2806930_-\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZBH1	Stx2-converting_phage	9.2e-54	100.0
WP_000267294.1\|2806926_2809512_-\|portal	phage portal protein	A0A0P0ZDD0	Stx2-converting_phage	0.0e+00	100.0
WP_001063099.1\|2809457_2809679_-	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
WP_000173031.1\|2809723_2811661_-\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	100.0
WP_001296023.1\|2811724_2813386_-\|terminase	terminase large subunit	B6DZ98	Enterobacteria_phage	0.0e+00	98.7
WP_000958366.1\|2813382_2813946_-\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.6e-82	92.0
WP_000829185.1\|2814236_2814602_-	HNH endonuclease	B6ETE5	Enterobacteria_phage	2.5e-60	93.4
WP_000095741.1\|2814643_2814844_+	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	4.3e-30	98.5
WP_000736382.1\|2815042_2815258_-	hypothetical protein	NA	NA	NA	NA
WP_012578895.1\|2815343_2815529_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	2.7e-18	98.4
WP_032140280.1\|2815750_2815837_-	hypothetical protein	NA	NA	NA	NA
WP_000992071.1\|2816391_2816925_-	lysozyme	Q6H9V6	Enterobacteria_phage	4.8e-100	95.5
WP_000369850.1\|2817030_2817303_+	hypothetical protein	NA	NA	NA	NA
WP_000193278.1\|2817268_2817613_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.8e-37	95.2
WP_000284510.1\|2817617_2817833_-\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_016230612.1\|2817983_2819837_-	SASA family carbohydrate esterase	Q08JA2	Stx2-converting_phage	0.0e+00	90.3
WP_000871291.1\|2820097_2820433_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_023142244.1\|2820713_2820845_-	DUF3927 family protein	H6WZJ7	Escherichia_phage	1.1e-05	100.0
WP_000024331.1\|2821646_2822696_-	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	4.4e-198	95.4
WP_000917751.1\|2822847_2823045_-	hypothetical protein	Q9MC00	Enterobacteria_phage	6.1e-29	98.5
WP_001513213.1\|2823271_2824093_-	antitermination protein	K7P7B9	Enterobacteria_phage	1.7e-80	60.1
WP_000140014.1\|2824089_2824470_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.9e-35	64.5
WP_001265085.1\|2824470_2825526_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.0e-90	48.4
WP_001329966.1\|2825527_2825800_-	hypothetical protein	I6PCV7	Cronobacter_phage	5.5e-12	49.2
WP_000018429.1\|2825967_2826180_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	5.2e-26	90.0
WP_000150294.1\|2826360_2827026_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_001151161.1\|2827200_2827626_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.2e-63	94.0
WP_000450998.1\|2827641_2828412_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-80	64.5
WP_000788950.1\|2828433_2829180_-	ATP-binding protein	A0A088CBP4	Shigella_phage	4.0e-113	83.8
WP_000095675.1\|2829186_2830149_-	DNA-binding protein	S5FM81	Shigella_phage	1.4e-70	56.4
WP_000693845.1\|2830171_2830597_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000471549.1\|2830593_2830809_-	transcriptional regulator	NA	NA	NA	NA
WP_000103687.1\|2830858_2831575_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	1.7e-52	42.0
WP_000379589.1\|2831847_2832003_+	DUF1391 family protein	M4QQ57	Salicola_phage	8.8e-07	51.1
WP_001171951.1\|2832162_2832381_+	hypothetical protein	NA	NA	NA	NA
WP_000449179.1\|2832946_2833135_+	hypothetical protein	NA	NA	NA	NA
WP_001090200.1\|2833131_2833323_+	DUF1482 family protein	NA	NA	NA	NA
WP_016230610.1\|2833415_2835887_+	exonuclease	A0A192Y6E0	Salmonella_phage	5.7e-55	56.0
WP_000113189.1\|2835951_2836200_+	excisionase	NA	NA	NA	NA
WP_000113700.1\|2836177_2837308_+\|integrase	tyrosine-type recombinase/integrase	O21940	Phage_21	3.4e-103	51.4
2838272:2838286	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2975269 : 3023518

Enterobacteria_phage(54.72%)

integrase,lysis,head,tRNA,holin,tail,transposase,portal,capsid,terminase

attL 2994053:2994067|attR 3025187:3025201

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000654172.1\|2975269_2975548_-	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	9.9e-25	55.4
WP_000290538.1\|2975544_2977566_-	hypothetical protein	A0A0E3M0V5	Enterobacteria_phage	7.2e-181	72.3
WP_001531667.1\|2977624_2981107_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.3
WP_023149564.1\|2981167_2981770_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-88	85.6
WP_023146277.1\|2981706_2982450_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.0e-148	97.2
WP_001152626.1\|2982454_2983153_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	5.1e-134	99.6
WP_000847375.1\|2983152_2983482_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	2.8e-58	99.1
WP_000840216.1\|2983478_2986040_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	98.4
WP_000459457.1\|2986032_2986467_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_000479203.1\|2986448_2986871_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.2e-68	94.3
WP_001295979.1\|2986886_2987627_-\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	1.6e-130	98.0
WP_000683150.1\|2987634_2988030_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	2.9e-70	98.5
WP_000985120.1\|2988026_2988605_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	92.7
WP_000753018.1\|2988616_2988970_-\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	2.2e-61	98.3
WP_000158908.1\|2988981_2989380_-	DNA packaging protein from bacteriophage origin	A0A0K2FIR1	Enterobacteria_phage	1.0e-62	98.5
WP_000063293.1\|2989421_2990447_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	7.8e-192	99.4
WP_001295978.1\|2990502_2990835_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
WP_000123268.1\|2990844_2992164_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.1e-230	97.7
WP_001295977.1\|2992144_2993746_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.4e-309	98.9
WP_000198149.1\|2993742_2993949_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001027261.1\|2993945_2995871_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.1
2994053:2994067	attL	NA	NA	NA	NA
WP_000453620.1\|2995845_2996391_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	6.8e-94	98.3
WP_000881610.1\|2996954_2997137_-	hypothetical protein	NA	NA	NA	NA
WP_000830178.1\|2997343_2997670_-	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_001298464.1\|2998150_2998444_+	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	7.0e-45	92.8
WP_001228695.1\|2998534_2998717_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001180486.1\|2998933_2999410_-	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	7.3e-84	94.9
WP_000544528.1\|2999396_2999702_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	7.0e-40	87.6
WP_001097224.1\|3000023_3000713_-	antiterminator Q	I6PDF8	Cronobacter_phage	4.9e-57	48.5
WP_000971096.1\|3000709_3000850_-	YlcG family protein	K7PHH3	Enterobacteria_phage	8.5e-09	68.9
WP_001099488.1\|3000846_3001209_-	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	1.6e-59	95.7
WP_000774479.1\|3001205_3001496_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	2.3e-48	95.8
WP_000224914.1\|3001488_3001659_-	hypothetical protein	K7P7K0	Enterobacteria_phage	2.4e-13	69.8
WP_001053005.1\|3001658_3002114_-	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	1.6e-59	66.9
WP_072147164.1\|3002110_3002212_-	hypothetical protein	NA	NA	NA	NA
WP_029700859.1\|3002561_3003593_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000080195.1\|3003619_3005233_-\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
WP_000624722.1\|3005263_3005614_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_000422741.1\|3005610_3006036_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_022645049.1\|3006181_3010447_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA
WP_000788794.1\|3010696_3011398_-	replication protein P of bacteriophage	M1FJ72	Enterobacteria_phage	1.5e-125	97.0
WP_001435464.1\|3011394_3012324_-	replication protein	A0A0M5M7Y1	Salmonella_phage	6.1e-111	64.1
WP_001182900.1\|3012410_3012950_-	hypothetical protein	K7PJT7	Enterobacteria_phage	2.6e-61	67.0
WP_001067458.1\|3013019_3013250_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
WP_000858975.1\|3013354_3014044_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_000233576.1\|3014639_3014846_+	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000995418.1\|3014921_3015218_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	8.9e-48	98.0
WP_000100847.1\|3015223_3016009_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000186848.1\|3016005_3016686_+	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	1.6e-132	100.0
WP_000149537.1\|3016682_3016865_+	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	1.8e-27	98.3
WP_000548516.1\|3016837_3017029_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	1.8e-25	93.7
WP_021533932.1\|3017039_3017321_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	3.0e-45	95.7
WP_000763374.1\|3017419_3017641_+	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	2.3e-32	93.2
WP_000002139.1\|3017640_3017967_+	ASCH domain-containing protein	A5VWB6	Enterobacteria_phage	9.8e-48	95.7
WP_000490213.1\|3017950_3018190_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.7e-39	96.2
WP_000088653.1\|3018329_3018566_+	excisionase	NA	NA	NA	NA
WP_000741335.1\|3018555_3019698_+\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	3.6e-206	100.0
WP_000444487.1\|3019811_3021062_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
WP_001248677.1\|3021233_3021887_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000476093.1\|3021896_3022358_+	phosphatase NudJ	NA	NA	NA	NA
WP_001295972.1\|3022411_3023518_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
3025187:3025201	attR	NA	NA	NA	NA

DBSCAN-SWA_12

3220626 : 3345149

142

Enterobacteria_phage(41.67%)

integrase,head,tRNA,holin,tail,transposase,portal,protease,plate,capsid,terminase

attL 3288014:3288033|attR 3327184:3327203

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295930.1\|3220626_3221412_-\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_000899600.1\|3221547_3222327_+	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_000436917.1\|3222303_3223197_-	YcbJ family phosphotransferase	NA	NA	NA	NA
WP_000011610.1\|3223350_3224097_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_000350057.1\|3224093_3224276_-	protein YcaR	NA	NA	NA	NA
WP_000056492.1\|3224327_3225560_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000570547.1\|3225596_3226583_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_000551259.1\|3226579_3228328_-	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	3.3e-57	29.8
WP_000705731.1\|3228364_3230629_-	ComEC family protein	NA	NA	NA	NA
WP_000167336.1\|3230834_3231119_-	integration host factor subunit beta	A7KV42	Bacillus_phage	3.2e-10	40.2
WP_000140327.1\|3231278_3232952_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_000125016.1\|3233062_3233746_-	(d)CMP kinase	NA	NA	NA	NA
WP_029364556.1\|3233918_3234701_-	metallopeptidase YcaL	NA	NA	NA	NA
WP_001281701.1\|3234844_3235234_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	1.5e-31	54.2
WP_001170114.1\|3235205_3235655_-	regulatory protein GemA	A4JWM5	Burkholderia_virus	6.1e-24	45.1
WP_000206212.1\|3235656_3235863_-	hypothetical protein	NA	NA	NA	NA
WP_000631813.1\|3235852_3236083_-	hypothetical protein	NA	NA	NA	NA
WP_000132039.1\|3236079_3236763_-	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	1.1e-32	36.1
WP_000763554.1\|3236759_3236975_-	hypothetical protein	NA	NA	NA	NA
WP_001295929.1\|3236989_3237286_-	hypothetical protein	NA	NA	NA	NA
WP_000632576.1\|3237295_3237568_-	hypothetical protein	NA	NA	NA	NA
WP_001140136.1\|3237856_3238387_-	host-nuclease inhibitor protein Gam	L7P7T1	Pseudomonas_phage	1.2e-58	66.7
WP_000843446.1\|3238414_3238684_-	hypothetical protein	NA	NA	NA	NA
WP_000960679.1\|3238686_3239853_-	AAA family ATPase	A4JWN1	Burkholderia_virus	2.2e-121	59.4
WP_000186588.1\|3239863_3241633_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A4JWN2	Burkholderia_virus	1.5e-227	69.4
WP_001095645.1\|3241648_3241966_-	hypothetical protein	NA	NA	NA	NA
WP_000533817.1\|3241965_3242886_-	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	1.6e-74	56.2
WP_000047759.1\|3242896_3243205_-	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	2.7e-23	55.9
WP_000123378.1\|3243257_3243446_-	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	3.9e-17	71.0
WP_000031013.1\|3243539_3243896_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000783854.1\|3244012_3244777_-	DNA adenine methylase	A2I2Y7	Vibrio_virus	5.2e-100	64.4
WP_001069611.1\|3244967_3245183_-	hypothetical protein	NA	NA	NA	NA
WP_000972294.1\|3245181_3245586_+	hypothetical protein	NA	NA	NA	NA
WP_000194951.1\|3245561_3246290_-	hypothetical protein	NA	NA	NA	NA
WP_000793146.1\|3246420_3246771_+	membrane protein	A4JWP3	Burkholderia_virus	1.5e-22	53.0
WP_001104440.1\|3246773_3247514_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-62	51.4
WP_000264665.1\|3247497_3248148_+	hypothetical protein	J9SVN7	Pseudomonas_phage	2.8e-09	32.9
WP_000175099.1\|3248144_3248471_+	hypothetical protein	Q6QIC4	Burkholderia_phage	1.1e-17	48.6
WP_000227701.1\|3248470_3248782_+	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	9.4e-32	62.6
WP_000124060.1\|3248781_3249327_+	DUF3486 family protein	A4JWJ3	Burkholderia_virus	9.3e-59	67.6
WP_001295924.1\|3249386_3250919_+	hypothetical protein	A4JWJ4	Burkholderia_virus	6.2e-185	62.8
WP_000090684.1\|3250918_3252415_+	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	9.7e-167	59.0
WP_000117548.1\|3252395_3253217_+\|capsid	minor capsid protein	A4JWJ6	Burkholderia_virus	1.8e-98	61.9
WP_000135514.1\|3253219_3253678_+	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	2.6e-30	44.8
WP_001273074.1\|3253892_3255008_+	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_001286908.1\|3255022_3255976_+	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-64	43.8
WP_000537457.1\|3255985_3256324_+	DUF2190 family protein	NA	NA	NA	NA
WP_000271668.1\|3256325_3256772_+	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
WP_001101804.1\|3256771_3257236_+	hypothetical protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.7
WP_012602372.1\|3257232_3257487_+	hypothetical protein	NA	NA	NA	NA
WP_000729834.1\|3257476_3258904_+\|tail	tail protein	A4JWK5	Burkholderia_virus	4.5e-214	76.3
WP_162832341.1\|3258900_3259425_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.1e-67	66.7
WP_000110114.1\|3259427_3259709_+	hypothetical protein	NA	NA	NA	NA
WP_000084213.1\|3259806_3260142_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001202894.1\|3260065_3260224_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_000016538.1\|3260299_3263251_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.8e-86	29.9
WP_000458387.1\|3263250_3264135_+\|tail	phage tail protein	A4JWL1	Burkholderia_virus	6.8e-51	47.9
WP_012602373.1\|3264131_3264347_+	membrane protein	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
WP_000808007.1\|3264334_3265489_+	phage late control D family protein	Q6QIA2	Burkholderia_phage	1.9e-85	47.6
WP_000148266.1\|3265485_3266082_+\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	3.2e-36	45.2
WP_000859111.1\|3266136_3266484_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	5.9e-35	62.4
WP_001219098.1\|3266474_3267578_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.4e-106	55.2
WP_000138756.1\|3267570_3268149_+\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	1.7e-66	66.8
WP_001554039.1\|3268151_3269432_+	hypothetical protein	A0A0K2FIZ6	Escherichia_phage	7.8e-40	43.8
WP_000072165.1\|3269438_3270053_-\|tail	tail assembly protein	Q9MCR5	Enterobacteria_phage	2.5e-60	60.5
WP_001486917.1\|3270052_3270535_-\|tail	tail fiber protein	K7P7Q7	Enterobacteria_phage	7.5e-28	44.7
WP_064767240.1\|3270575_3271016_-\|tail	tail fiber protein	K7PH60	Enterobacterial_phage	7.1e-41	55.6
WP_000904922.1\|3271075_3271648_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.6e-85	85.2
WP_000445240.1\|3271903_3273187_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_000057158.1\|3273257_3274346_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.7e-81	46.8
WP_000642852.1\|3274544_3275237_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_000194832.1\|3275366_3277127_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_001295917.1\|3277532_3278390_+	formate transporter FocA	NA	NA	NA	NA
WP_001292822.1\|3278444_3280727_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-162	41.5
WP_000111043.1\|3280918_3281659_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	8.0e-21	26.5
WP_000109283.1\|3281755_3282904_-	MFS transporter	NA	NA	NA	NA
WP_000165876.1\|3283217_3283844_+	hydrolase	NA	NA	NA	NA
WP_000534666.1\|3283879_3284743_-	dimethyl sulfoxide reductase anchor subunit DmsC	NA	NA	NA	NA
WP_000213098.1\|3284744_3285362_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
WP_000850306.1\|3285372_3287817_-	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	6.6e-221	49.8
3288014:3288033	attL	NA	NA	NA	NA
WP_000023739.1\|3288116_3289109_-\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	1.3e-103	56.2
WP_001368591.1\|3289178_3289520_-	helix-turn-helix transcriptional regulator	Q1JS45	Enterobacteria_phage	4.7e-16	51.2
WP_001204236.1\|3289624_3290146_+	transcriptional regulator	NA	NA	NA	NA
WP_000856387.1\|3290150_3290573_+	hypothetical protein	NA	NA	NA	NA
WP_001287828.1\|3290579_3290771_-	hypothetical protein	NA	NA	NA	NA
WP_000776267.1\|3290908_3291259_+	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	8.1e-56	93.1
WP_112034479.1\|3291269_3291455_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	8.1e-15	75.5
WP_000514277.1\|3292336_3292579_+	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
WP_000021715.1\|3292575_3292689_+	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	1.8e-09	89.2
WP_000543036.1\|3292782_3293193_+	hypothetical protein	NA	NA	NA	NA
WP_000985157.1\|3293216_3293420_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.5e-25	83.6
WP_000153700.1\|3293416_3293683_+	winged helix-turn-helix transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	2.0e-30	75.9
WP_000104290.1\|3293679_3293979_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	2.4e-40	88.9
WP_023142408.1\|3293990_3294608_+	hypothetical protein	S5MQL6	Escherichia_phage	1.5e-09	42.0
WP_000599382.1\|3294604_3294970_+	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	1.7e-61	97.5
WP_000123489.1\|3294976_3297799_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	98.4
WP_000686485.1\|3297875_3298835_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	4.2e-179	99.1
WP_000211282.1\|3298839_3299154_+	plasmid partition protein	A0A0A7NPT5	Enterobacteria_phage	4.1e-19	52.3
WP_000193205.1\|3299237_3300080_-	hypothetical protein	NA	NA	NA	NA
WP_001068329.1\|3300119_3300617_-	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_000236495.1\|3301340_3301865_+	hypothetical protein	NA	NA	NA	NA
WP_000087814.1\|3301879_3302926_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	2.2e-202	99.7
WP_000613780.1\|3302925_3304677_-\|terminase	terminase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.8
WP_001262655.1\|3304831_3305668_+\|capsid	phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	2.7e-150	99.6
WP_001055083.1\|3305691_3306744_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	1.4e-188	94.3
WP_000632309.1\|3306789_3307590_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	6.9e-127	89.1
WP_000063100.1\|3307691_3308186_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.9e-87	97.0
WP_000864901.1\|3308185_3308386_+\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_001342221.1\|3308388_3308712_+\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.7e-47	93.5
WP_000072341.1\|3308708_3309101_+	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	1.9e-69	96.9
WP_000780577.1\|3309097_3309493_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	1.0e-59	93.3
WP_000202148.1\|3309631_3311509_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	2.7e-299	80.2
WP_000921127.1\|3311532_3312000_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	3.5e-83	95.5
WP_000356366.1\|3311992_3312628_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	4.1e-114	99.5
WP_001271941.1\|3312624_3313206_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	3.3e-102	98.4
WP_000213444.1\|3313202_3313553_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	3.5e-59	99.1
WP_001111954.1\|3313556_3314453_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	3.3e-154	97.7
WP_000071703.1\|3314445_3314976_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	3.6e-92	98.2
WP_001554335.1\|3317212_3317740_+\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	2.6e-90	93.7
WP_000972134.1\|3317768_3318302_-\|tail	tail fiber assembly protein	C9DGR0	Escherichia_phage	4.2e-96	98.9
WP_000905061.1\|3318806_3319406_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	3.8e-98	98.9
WP_000979945.1\|3319434_3319923_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.4e-85	99.4
WP_000853410.1\|3319935_3322743_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	90.1
WP_000333503.1\|3322729_3322885_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_000651577.1\|3322893_3323268_-\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	9.9e-36	71.5
WP_000290462.1\|3323323_3323836_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	1.5e-90	97.1
WP_000005447.1\|3323835_3325020_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	8.4e-222	97.5
WP_000132830.1\|3325177_3326287_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	1.3e-195	94.9
WP_000488106.1\|3326327_3326588_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000078916.1\|3326779_3326920_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
WP_000886683.1\|3327225_3328518_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
3327184:3327203	attR	NA	NA	NA	NA
WP_000067797.1\|3328608_3329952_-	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	2.1e-80	40.8
WP_001295343.1\|3329962_3330574_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000077041.1\|3330732_3334839_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_000228473.1\|3334973_3335468_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_001385255.1\|3336011_3336977_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.9e-62	44.6
WP_001043561.1\|3337099_3338866_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	4.1e-23	24.3
WP_001202204.1\|3338866_3340588_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	1.4e-20	25.0
WP_001241674.1\|3340629_3341334_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3341618_3341837_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_000934041.1\|3342521_3344798_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_000520781.1\|3344828_3345149_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP049085

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection