CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP049942	Proteus mirabilis strain XH1569 chromosome, complete genome	3 crisprs	DEDDh,c2c9_V-U4,cas3,DinG,PD-DExK,csa3	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP049942_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049942_1

2460919-2461093

Orphan

Consensus_repeat	Method
ATAATTGCCTTTAGGTTGATATTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP049942_1

>merge|NZ_CP049942|1|2460919-2461093|CRISPRCasFinder
ATAATTCCCTTTGGGTTGATAATTCCCCTTAGGCTGATATTTACCATCTGACTCTGATTTAGAATAACTATAACCTGTCGCTAAATAATTGCCTTTAGGTTGATATTTATTATCAGATTCCGTTTTAGTATAGGATGCACCCACTAATGCATAATTGCCTTTGGGTTGATAATTT

>NZ_CP049942|1|1|2460919-2461093|CRISPRCasFinder
ATAATTCCCTTTGGGTTGATAATT	CCCCTTAGGCTGATATTTACCATCTGACTCTGATTTAGAATAACTATAACCTGTCGCTAA
ATAATTGCCTTTAGGTTGATATTT	ATTATCAGATTCCGTTTTAGTATAGGATGCACCCACTAATGC
ATAATTGCCTTTGGGTTGATAATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049942.1\|WP_049213336.1\|2457648_2458266_+\|dimethylsulfoxide-reductase-subunit-B	unknown	unknown	gnl\|CDD\|131996
NZ_CP049942.1\|WP_004243612.1\|2459161_2459704_-\|DUF924-domain-containing-protein	unknown	unknown	gnl\|CDD\|377592
NZ_CP049942.1\|WP_004250735.1\|2453588_2454845_+\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP049942.1\|WP_012368078.1\|2449883_2450546_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP049942.1\|WP_004243622.1\|2464701_2465514_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004243621.1\|2464006_2464699_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375779
NZ_CP049942.1\|WP_004250719.1\|2465815_2466304_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004243611.1\|2458269_2459046_+\|dimethyl-sulfoxide-reductase-anchor-subunit	unknown	unknown	gnl\|CDD\|225839
NZ_CP049942.1\|WP_004243617.1\|2463665_2464010_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_049198725.1\|2466306_2468610_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223496
NZ_CP049942.1\|WP_004243623.1\|2465482_2465803_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004250737.1\|2450630_2451191_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP049942.1\|WP_004243627.1\|2468692_2469151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_036971140.1\|2451253_2452111_-\|D-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|180656
NZ_CP049942.1\|WP_012368081.1\|2455198_2457637_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274006
NZ_CP049942.1\|WP_017628013.1\|2460272_2460452_+\|GhoT/OrtT-family-toxin	unknown	unknown	gnl\|CDD\|371222
NZ_CP049942.1\|WP_017628010.1\|2462485_2463673_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP049942.1\|WP_012368088.1\|2469210_2469663_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004243615.1\|2461832_2462489_-\|DUF2612-domain-containing-protein	unknown	unknown	gnl\|CDD\|371354
NZ_CP049942.1\|WP_004243604.1\|2452297_2452876_+\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|182308

Protein	Function_ID	Function_description	E-value
NZ_CP049942.1\|WP_049213336.1\|2457648_2458266_+\|dimethylsulfoxide-reductase-subunit-B	gnl\|CDD\|131996	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.	1.91743e-91
NZ_CP049942.1\|WP_004243612.1\|2459161_2459704_-\|DUF924-domain-containing-protein	gnl\|CDD\|377592	pfam06041, DUF924, Bacterial protein of unknown function (DUF924). This family consists of several hypothetical bacterial proteins of unknown function. Structurally, this family resembles TPR-like repeats.	1.54842e-89
NZ_CP049942.1\|WP_004250735.1\|2453588_2454845_+\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.66127e-32
NZ_CP049942.1\|WP_012368078.1\|2449883_2450546_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	1.55191e-32
NZ_CP049942.1\|WP_004243611.1\|2458269_2459046_+\|dimethyl-sulfoxide-reductase-anchor-subunit	gnl\|CDD\|225839	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only].	1.76747e-46
NZ_CP049942.1\|WP_004243621.1\|2464006_2464699_-\|hypothetical-protein	gnl\|CDD\|375779	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain. This domain is found in the N-terminal domain of gene product 138 (gp138) in an unidentified bacteriophage. Gp138 is thought to be involved in the process of opening the host cell membrane during infection. The domain has an OB-fold with an intramolecular disulfide bond between C114 and C120.	1.64931e-18
NZ_CP049942.1\|WP_049198725.1\|2466306_2468610_-\|hypothetical-protein	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0.00274832
NZ_CP049942.1\|WP_004250737.1\|2450630_2451191_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.86135e-15
NZ_CP049942.1\|WP_036971140.1\|2451253_2452111_-\|D-amino-acid-transaminase	gnl\|CDD\|180656	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed.	4.48693e-127
NZ_CP049942.1\|WP_012368081.1\|2455198_2457637_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|274006	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family. Members of this family include known and probable dimethyl sulfoxide reductase (DMSO reductase) A chains. In E. coli, dmsA encodes the canonical anaerobic DMSO reductase A chain. The paralog ynfE, as part of ynfFGH expressed from a multicopy plasmid, could complement a dmsABC deletion, suggesting a similar function and some overlap in specificity, although YnfE could not substitute for DmsA in a mixed complex.	0
NZ_CP049942.1\|WP_017628013.1\|2460272_2460452_+\|GhoT/OrtT-family-toxin	gnl\|CDD\|371222	pfam10753, Toxin_GhoT_OrtT, Toxin GhoT_OrtT. GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is homologous to GhoT, but it is not part of a TA pair. In this case, it acts as an independent toxin to reduce growth during stress related to amino acid and DNA synthesis.	7.72766e-13
NZ_CP049942.1\|WP_017628010.1\|2462485_2463673_-\|hypothetical-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	9.13292e-07
NZ_CP049942.1\|WP_004243615.1\|2461832_2462489_-\|DUF2612-domain-containing-protein	gnl\|CDD\|371354	pfam11041, DUF2612, Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	4.26666e-71
NZ_CP049942.1\|WP_004243604.1\|2452297_2452876_+\|HdeD-family-acid-resistance-protein	gnl\|CDD\|182308	PRK10209, PRK10209, HdeD family acid-resistance protein.	2.20798e-64

>NZ_CP049942.1|WP_017628013.1|2460272_2460452_+|GhoT/OrtT-family-toxin
MSVIATIGIGYLIGAVLSFIITFFLTKDPSLAMRLLSAFLIAITWPLSFPMAIIFSIFG
>NZ_CP049942.1|WP_004243612.1|2459161_2459704_-|DUF924-domain-containing-protein
MVPYQPVLTFWFEECTPKQWFQKDSAFDKEIKDRFGELCISASRAELASWRESIEGRLGEIIILDQFSRNIWRDTPKAFAQDNMALILAQEAIRLPEYLTLTPVKRKFLIMPFMHSESQKIHQDAIALFSQLNDDDTYQYELRHKEIIDKYGRYPHRNEILGRTSTPEELAFLQQPGSSF
>NZ_CP049942.1|WP_004243611.1|2458269_2459046_+|dimethyl-sulfoxide-reductase-anchor-subunit
MHELPLVFFTVLGSSAAGLFLIAYISKKLGQIDEQQLRNANILALILMLVGLGIGGLHVGQPLRFFNMLLGVGRSPMSNEAFLSGVFTGFAFATVALTIMKKWRGLREICNLFTVIFGLAFVWSIPQVYHIPTIANWNTDYTTLQFWMTLLIGGGVLAMVSGARRLGALSFIIGAIITFAARSGYVSFLSFNGPELSAEQSLFWGFQLAVLALGIVVVGFSALKAQTSKVTLATCAAAVVIAELSGRIAFYNLWHITM
>NZ_CP049942.1|WP_049213336.1|2457648_2458266_+|dimethylsulfoxide-reductase-subunit-B
MKQYGFYFDSTKCTGCKTCQVSCKDEKDLDLGPKFRRVYEYGGGSWAKQDGIWTQNIYSYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDVCVGCRYCELRCPYGAPQFDEKKKLMSKCDGCYERVAQGMKPVCVESCPQRALDFDDIDVIRAKHGTECGIAPMPDPSLTNPNIVIKAHKDAKPSGDKTGSVQNAAEV
>NZ_CP049942.1|WP_012368081.1|2455198_2457637_+|molybdopterin-dependent-oxidoreductase
MSMSKIKNNVSITEMSRRGFIQSAAVLSGAAAVAGTVSLPFSANAQTPQGIRPDETSETIKYSACLVNCGSRCPLKVHVKDGVIRRISNETMFDDSTFGLHQIRPCLRGRSVRWKTYNPDRLKYPMKRVGKRGEGKFERISWDEATSIIADKLKYTIDTYGNEAIYYQYGTGSTGANLHGRTACKRLLSTVGGFLSDYGTYSYSQLTGIVPYVYGDMLESLLTEIENSDLVVMFGHNLAETRMSGGGQFYETLNALDKSKSKVIIIDPRRTDSVTTLGAEWIPIYPGTDAALVAALGYVMIQEGITDEAFLREYCIGWDKQTLPASAPENGSYKDYILGNGPDGIAKTPEWASQLTGISVARIIQLAREIGNARAAWISQGWGIQRTSNGEQACRAIMMLPLMSGHIGRPGTNTGCWGGSIEYPVASFAIPNPVKTQIPTFMWSEAVARGEELTSKNAGVRNKDKLDTGIKFMWCYSSNVIGNQHADLNKTHELLQDESKCEFILVWDNHMTPSAKYADILLPDVTTVETNDLINNSYASGAYHYMVRLQNAIEPLWENRPNYDVLADIAEKLGVKEKFTEGRTYQEWIEYCYNQVKANNPALPSFAETNDMGIVDRKLPPRSAYVALEAFRQDPIANPLKTASGKIEIYSEKLMQDTEGWILPEGDRIPAIPEYCKNEEGVENVTLKEKFPLQMTGFHDKGHVHSTYFNVAMLREAIPHQFWLNPVDAAQRGLKSGDIAEIYNERGRLHIRVKVTDRVLPGVIAVPQGAWRSLDTTGVDTGGCINTLTSWHPSPFAKGNPQHTNLVEVKRA
>NZ_CP049942.1|WP_004250735.1|2453588_2454845_+|mechanosensitive-ion-channel-family-protein
MQQQLLTWIRQFNEEYAQITSLLLVLLIIFVVALVLHFILHKLVLPKLSKAISKYDQKWQLSFEINKLFSRFAFLIQGVVINIQALLWMGPGKTQEILTTTAQAWCLLFGLLMIFSIMDLCLQIMRNSPSFGRLPLRGIFQSLKLVASVLIGIMIVSLLIGKSPLILLSGLGAMTAVLMLVFKDPIMGLVAGIQLSANNMISLGDWLEMPKYGADGAVVDISLTTVKVRNWDNTVTTIPTYSLISDSFKNWQAMTQSGGRRIKRSLSLDINSIYFLDQENIDKLEKAQLLEPYIKSKVGEISSYNASLCHEHQMPLNQRGMTNVGTFRAYVEAYLKNHPKIHKQMTIMVRQLAPTSEGLPIEIYAFTNTTVWVEYEAIQSDIFDHIFAILPQFGLRIHQSPTGSDVRALKFPTNIDTP
>NZ_CP049942.1|WP_004243604.1|2452297_2452876_+|HdeD-family-acid-resistance-protein
MLDINKNNLSQLTEKLVKKQCTLMSIIAMLGLLAGIICIINPFSSGVVVSVFLGVVFFACAITSIMAAFNSRISSGWSMLITLLAGFIYLFLGYIFITDPLNGMLSLAFIIGYLFIFAGILRLVLGFKQIKDSFYGWFNILVGFLDLVLAYFLLAFGPETSITLVMALIGIQLILSSITILSIASAIKRMTR
>NZ_CP049942.1|WP_036971140.1|2451253_2452111_-|D-amino-acid-transaminase
MSEIVYLNNQFVPKEQANISVFDRGFLFADAVYEVTAVINGQLIDFEGHFQRLQRSCKALSMPFSLTKEQLKEIHEQLIDKNHLHEGLIYLQVTRGADSSRFFDFPSSSVAPTLVLFVQHSTVVNHPNASKGISVVSVEDIRWQRCDIKTVALLAACLAKHHAHQQGADDAIFIKEGYITEGSSSNFFIVNQQDEIITRPLSQDILPGITRQAIIQLAKEQKLTIIERLFTLEEAKQAKEAFISSATTLIWPVISIDNEKINQGKVGALSQRLREIYLEKAGVKP
>NZ_CP049942.1|WP_004250737.1|2450630_2451191_+|helix-turn-helix-transcriptional-regulator
MSSPSAPIEIISQSIARERKKAGLSLAEIARRAGIAKSTLSQLEAGQGNPSIETLWAICVALNIPFSQLISSPKPEVKVIRKGDGFKISAEKAYYHAFLLSSCPNGAKRDIYTVIAQPGKDRVSDPHSKNVTEHILIISGRAIVGTLDNQQELSPGDYICYPGDVTHVLRALEPDTTAVMIIEHHN
>NZ_CP049942.1|WP_012368078.1|2449883_2450546_-|branched-chain-amino-acid-ABC-transporter-permease
MHINSRLDNNVLRDILLVSLADGIVGISYGALAHTQGFDFWVPLSLSIFVLAGASEFLFIGVVAMGGSAIYAALAGLMVNARHIPFSMAVKELPGKGIKSLLGFHVLNDESVVFGLSQSTAEQNRLAFWACGLGILLMWPLGTMLGVYLGSFIVDIKMLGLDAMFPAIILALSLPALKNKLTRKAAIIGSVIALATTLFLPAGIPVLLSLLGVLFVVRKI
>NZ_CP049942.1|WP_004243615.1|2461832_2462489_-|DUF2612-domain-containing-protein
MNIQQFDYHSDLLQAILWQYENADKLKSLAHFKADYFHQSTVLFWQNWYRDIFNIDTANDFGLAVWARILDVPLGIDISPSEKTKIGFGFGKKKANFNANFRRNTDYTLSLTLDQKRMLIRMRYFNLTQSPTVTNINQFLKRFFWRGESKVFVLDPFDMTYMYYVFNFNPDERLRLLLENFDLMPRPSGVGVKYRIITKKAFGYGSYRKNFLKSNFGE
>NZ_CP049942.1|WP_017628010.1|2462485_2463673_-|hypothetical-protein
MADYRYINNKGVIVPDTAALRKEVEDEFRTVFGQSINLSPETPQGVLATMEIENRDAIVRNNAELANQINPDIAGGIFLDAIWALMGGERINATHSYLSNVEFMGVPGTIIPKGSQALTINGAVFETLTSLIIADTGKITGDMRAKEYGPITCGIGQLNKVASSVLGWEKVNNTTHAIIGRYAESDIKARRRRKQTLAKNTISVAQAITSSLYELAGVNSLSFRENFTDKTLTIDGISLLPHSIYVCVEGGDSHEIANVLLRTKTIGAAFNGDIEINLLEPASGQEYPIKFSRPKEVTIFCKVTVKKSSFDAQTIIPDALEKWSHGEIEGDNGLVVGRDVSPFEISAAVNAVEPHLFVTKVELSTDGKNWHVALIPIAINQIARLPKGAIQVVMV
>NZ_CP049942.1|WP_004243617.1|2463665_2464010_-|hypothetical-protein
MRTFAINQHNDLVIDAKGDLQICDNDEAVKNLCQHFIKAVRGEMLHKKDKGIPYWSATFSRQVDIPLFEMAFRQRLAEIEEVVAISHFNAFLDNGVLKYQADIRTIYGGFTLHG
>NZ_CP049942.1|WP_004243621.1|2464006_2464699_-|hypothetical-protein
MSKPNNDIASVGSLAGAFSSAFRHLMMNTDDMLPATVIDYDEKSNRAVIKPLVMMLTTDNQTISRAPVANIPVFRFGGGGFFIRAPIKAGDFGWLKANDRDISLIFQRGGLEDRPNTTRLHTFSDAMFFPDTLKGWVIDGKNIDALVIQSMDGSVCFSLHNDKVVLETPKYEINARETIFTGNVTVNGNYAVNGNSDSQGGVMRHNGKDIGSTHRHSGVQAGKDNTGSPI
>NZ_CP049942.1|WP_004243622.1|2464701_2465514_-|hypothetical-protein
MDLRRIRLGIEVGERLQWYEGLRISASGTKYANPLQNECNVTISGLNAQTRDYLLTETSPYNNNKQTRRLYLEVGRVNTGLLSLFIGDIVSAEIDSPPDVTLTLSAKTSHQSAGKIISSSGGTMRRLSEIALAIADDCGVKLDFQATDKNIANWYYCGSALHQIERLQEAGDVKAFIDDDTLFVKDDDKALKSRLRILNMNSGMIGIPKATESGLTVSYLIDSTSELGGMLRLESKLNPSLNGDYIIEQLAFSVASHEADFNYTAICKRA
>NZ_CP049942.1|WP_004243623.1|2465482_2465803_-|hypothetical-protein
MQEIPLQAIPNQRFSVAIAGVNWQLTLKVANQTMFCDIEREGEILITGMRLVANTPIIPYRYLNQGINLMFLTEHDALPWYEEFTKTQSLVYWSEEDGSSTNKARN
>NZ_CP049942.1|WP_004250719.1|2465815_2466304_-|hypothetical-protein
MITEVRIFDLASFTTLFDSVNPTQVTIDDSHQAITFTVENGESRSDHVVINPISISISLLLTGDIANAYATIKQLYDENTLVGIQTRVSTYQPMLLESLSHDEDPSKVDAIELKLKFIEWKSIEPEYNKKSAKSTKKPKQSSTINRGNVKSKKSMPIGKKQG
>NZ_CP049942.1|WP_049198725.1|2466306_2468610_-|hypothetical-protein
MSLLPVFSQVLTLDAEVSDNALNNIRKSTNEILEEMKKIEQGASAGINRFFAFVQEIAASFNELSLEPEINLSVDNQEIIQASETVENSIQQIVKTALSSTQEFDTFLQNILTGLTSLSLDEPINIEINSGETQEKIHSITSSIDALKDAMSVLNYTRNLLSNDVDSDASHLANLNAEYQAMEDQLASLNNELTLLTEAEKKNKENKLVIDEVIKNLGADYDQFISTMQTQGIKAAIEEAQAQRRLSSSVDETGKSYQQTVDKMKDFILNAIGATDIMGTLQKVFSASLERSQEIESLDKLSKKMGVAAIDIDAFSGAMAAIGGTKEAAQADLAAMATAFDDTQDPIEQLLQVADNVKNMSFDDAQKELEKLGVVDDKTIELMMKGRQELERTMGVQKQFSGINDDSIESAIQLNATIHKFSQLAAQFKNNFLDMIIPTLAKGMEWFDKLVDFCVKNKDIVISFFSAIGAAVAIYYLPVMISAAASTLAMALPIIAIATVIGLLGVAFKLVYDDIMNFINGNDSMIGRILEKYPVLKSVIMTIWQAWQSFFEYLKEAVTVVADFVIAAWDLISNSFNQFIQTLEIGINNLIAWGQSIIDIFIFVSDSVVSLFEWMWGCVEKILDFVDEKINLIQDIWQSAKSFFGMDDEEKEIRVVQKVERRLTNEGELDYILPQSQTATRYYSPMQEVKSLNNGLAISSNNSLNPMTSQMISNQSSIKNESNVQIGEIKIETQATNGAEVVKEIKKSYTEQEAKNISQNHSSGWRV
>NZ_CP049942.1|WP_004243627.1|2468692_2469151_-|hypothetical-protein
MLIKPKEITVIDSDRQQHTFIISRLPATIGREILAKYPLSNAPKIGDYEVSKEAMLKMMAYVAVEKEGQEIYLKTSTLIDNHVPDGEALIRLELEMLKYNTSFFGNGGSQNFLQYLLGKLSGSLPSIIKTLMASLPSSSQPASPLSQNSKQP
>NZ_CP049942.1|WP_012368088.1|2469210_2469663_-|hypothetical-protein
MNDISATGLSLIIQASKTFPAGIPITTFSDEGDPLDLPTVNITQTAVDINGNLVSWSSPTPQTVTINVLAGSEEDENLAILFDANTARRGRRPASDVITLVASYGDGSITTARNGRITDGCRGNSVAGAGRLKSKQYTFIFQDFDRVRAR

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Crispr_ID: NZ_CP049942_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049942_2

2461243-2461350

Orphan

Consensus_repeat	Method
ATAATTGCCTTTAGGTTGATATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049942_2

>merge|NZ_CP049942|2|2461243-2461350|CRISPRCasFinder
ATAATTGCCTTTAGGTTGATATTTCCCATCAGACTCCGCTTTGGTATAACTATCGCCTTTATTCGCATAATTTCCCGCAGGAGCATAATTGCCTTTGGGTTGATATTT

>NZ_CP049942|2|2|2461243-2461350|CRISPRCasFinder
ATAATTGCCTTTAGGTTGATATTT	CCCATCAGACTCCGCTTTGGTATAACTATCGCCTTTATTCGCATAATTTCCCGCAGGAGC
ATAATTGCCTTTGGGTTGATATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049942.1\|WP_049213336.1\|2457648_2458266_+\|dimethylsulfoxide-reductase-subunit-B	unknown	unknown	gnl\|CDD\|131996
NZ_CP049942.1\|WP_004243612.1\|2459161_2459704_-\|DUF924-domain-containing-protein	unknown	unknown	gnl\|CDD\|377592
NZ_CP049942.1\|WP_004250735.1\|2453588_2454845_+\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP049942.1\|WP_012368078.1\|2449883_2450546_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP049942.1\|WP_004243622.1\|2464701_2465514_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004243621.1\|2464006_2464699_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375779
NZ_CP049942.1\|WP_004250719.1\|2465815_2466304_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004243611.1\|2458269_2459046_+\|dimethyl-sulfoxide-reductase-anchor-subunit	unknown	unknown	gnl\|CDD\|225839
NZ_CP049942.1\|WP_004243617.1\|2463665_2464010_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_049198725.1\|2466306_2468610_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223496
NZ_CP049942.1\|WP_004243623.1\|2465482_2465803_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004250737.1\|2450630_2451191_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP049942.1\|WP_004243627.1\|2468692_2469151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_036971140.1\|2451253_2452111_-\|D-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|180656
NZ_CP049942.1\|WP_012368081.1\|2455198_2457637_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274006
NZ_CP049942.1\|WP_017628013.1\|2460272_2460452_+\|GhoT/OrtT-family-toxin	unknown	unknown	gnl\|CDD\|371222
NZ_CP049942.1\|WP_017628010.1\|2462485_2463673_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP049942.1\|WP_012368088.1\|2469210_2469663_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004243615.1\|2461832_2462489_-\|DUF2612-domain-containing-protein	unknown	unknown	gnl\|CDD\|371354
NZ_CP049942.1\|WP_004243604.1\|2452297_2452876_+\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|182308

Protein	Function_ID	Function_description	E-value
NZ_CP049942.1\|WP_049213336.1\|2457648_2458266_+\|dimethylsulfoxide-reductase-subunit-B	gnl\|CDD\|131996	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.	1.91743e-91
NZ_CP049942.1\|WP_004243612.1\|2459161_2459704_-\|DUF924-domain-containing-protein	gnl\|CDD\|377592	pfam06041, DUF924, Bacterial protein of unknown function (DUF924). This family consists of several hypothetical bacterial proteins of unknown function. Structurally, this family resembles TPR-like repeats.	1.54842e-89
NZ_CP049942.1\|WP_004250735.1\|2453588_2454845_+\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.66127e-32
NZ_CP049942.1\|WP_012368078.1\|2449883_2450546_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	1.55191e-32
NZ_CP049942.1\|WP_004243611.1\|2458269_2459046_+\|dimethyl-sulfoxide-reductase-anchor-subunit	gnl\|CDD\|225839	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only].	1.76747e-46
NZ_CP049942.1\|WP_004243621.1\|2464006_2464699_-\|hypothetical-protein	gnl\|CDD\|375779	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain. This domain is found in the N-terminal domain of gene product 138 (gp138) in an unidentified bacteriophage. Gp138 is thought to be involved in the process of opening the host cell membrane during infection. The domain has an OB-fold with an intramolecular disulfide bond between C114 and C120.	1.64931e-18
NZ_CP049942.1\|WP_049198725.1\|2466306_2468610_-\|hypothetical-protein	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0.00274832
NZ_CP049942.1\|WP_004250737.1\|2450630_2451191_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.86135e-15
NZ_CP049942.1\|WP_036971140.1\|2451253_2452111_-\|D-amino-acid-transaminase	gnl\|CDD\|180656	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed.	4.48693e-127
NZ_CP049942.1\|WP_012368081.1\|2455198_2457637_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|274006	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family. Members of this family include known and probable dimethyl sulfoxide reductase (DMSO reductase) A chains. In E. coli, dmsA encodes the canonical anaerobic DMSO reductase A chain. The paralog ynfE, as part of ynfFGH expressed from a multicopy plasmid, could complement a dmsABC deletion, suggesting a similar function and some overlap in specificity, although YnfE could not substitute for DmsA in a mixed complex.	0
NZ_CP049942.1\|WP_017628013.1\|2460272_2460452_+\|GhoT/OrtT-family-toxin	gnl\|CDD\|371222	pfam10753, Toxin_GhoT_OrtT, Toxin GhoT_OrtT. GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is homologous to GhoT, but it is not part of a TA pair. In this case, it acts as an independent toxin to reduce growth during stress related to amino acid and DNA synthesis.	7.72766e-13
NZ_CP049942.1\|WP_017628010.1\|2462485_2463673_-\|hypothetical-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	9.13292e-07
NZ_CP049942.1\|WP_004243615.1\|2461832_2462489_-\|DUF2612-domain-containing-protein	gnl\|CDD\|371354	pfam11041, DUF2612, Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	4.26666e-71
NZ_CP049942.1\|WP_004243604.1\|2452297_2452876_+\|HdeD-family-acid-resistance-protein	gnl\|CDD\|182308	PRK10209, PRK10209, HdeD family acid-resistance protein.	2.20798e-64

>NZ_CP049942.1|WP_017628013.1|2460272_2460452_+|GhoT/OrtT-family-toxin
MSVIATIGIGYLIGAVLSFIITFFLTKDPSLAMRLLSAFLIAITWPLSFPMAIIFSIFG
>NZ_CP049942.1|WP_004243612.1|2459161_2459704_-|DUF924-domain-containing-protein
MVPYQPVLTFWFEECTPKQWFQKDSAFDKEIKDRFGELCISASRAELASWRESIEGRLGEIIILDQFSRNIWRDTPKAFAQDNMALILAQEAIRLPEYLTLTPVKRKFLIMPFMHSESQKIHQDAIALFSQLNDDDTYQYELRHKEIIDKYGRYPHRNEILGRTSTPEELAFLQQPGSSF
>NZ_CP049942.1|WP_004243611.1|2458269_2459046_+|dimethyl-sulfoxide-reductase-anchor-subunit
MHELPLVFFTVLGSSAAGLFLIAYISKKLGQIDEQQLRNANILALILMLVGLGIGGLHVGQPLRFFNMLLGVGRSPMSNEAFLSGVFTGFAFATVALTIMKKWRGLREICNLFTVIFGLAFVWSIPQVYHIPTIANWNTDYTTLQFWMTLLIGGGVLAMVSGARRLGALSFIIGAIITFAARSGYVSFLSFNGPELSAEQSLFWGFQLAVLALGIVVVGFSALKAQTSKVTLATCAAAVVIAELSGRIAFYNLWHITM
>NZ_CP049942.1|WP_049213336.1|2457648_2458266_+|dimethylsulfoxide-reductase-subunit-B
MKQYGFYFDSTKCTGCKTCQVSCKDEKDLDLGPKFRRVYEYGGGSWAKQDGIWTQNIYSYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDVCVGCRYCELRCPYGAPQFDEKKKLMSKCDGCYERVAQGMKPVCVESCPQRALDFDDIDVIRAKHGTECGIAPMPDPSLTNPNIVIKAHKDAKPSGDKTGSVQNAAEV
>NZ_CP049942.1|WP_012368081.1|2455198_2457637_+|molybdopterin-dependent-oxidoreductase
MSMSKIKNNVSITEMSRRGFIQSAAVLSGAAAVAGTVSLPFSANAQTPQGIRPDETSETIKYSACLVNCGSRCPLKVHVKDGVIRRISNETMFDDSTFGLHQIRPCLRGRSVRWKTYNPDRLKYPMKRVGKRGEGKFERISWDEATSIIADKLKYTIDTYGNEAIYYQYGTGSTGANLHGRTACKRLLSTVGGFLSDYGTYSYSQLTGIVPYVYGDMLESLLTEIENSDLVVMFGHNLAETRMSGGGQFYETLNALDKSKSKVIIIDPRRTDSVTTLGAEWIPIYPGTDAALVAALGYVMIQEGITDEAFLREYCIGWDKQTLPASAPENGSYKDYILGNGPDGIAKTPEWASQLTGISVARIIQLAREIGNARAAWISQGWGIQRTSNGEQACRAIMMLPLMSGHIGRPGTNTGCWGGSIEYPVASFAIPNPVKTQIPTFMWSEAVARGEELTSKNAGVRNKDKLDTGIKFMWCYSSNVIGNQHADLNKTHELLQDESKCEFILVWDNHMTPSAKYADILLPDVTTVETNDLINNSYASGAYHYMVRLQNAIEPLWENRPNYDVLADIAEKLGVKEKFTEGRTYQEWIEYCYNQVKANNPALPSFAETNDMGIVDRKLPPRSAYVALEAFRQDPIANPLKTASGKIEIYSEKLMQDTEGWILPEGDRIPAIPEYCKNEEGVENVTLKEKFPLQMTGFHDKGHVHSTYFNVAMLREAIPHQFWLNPVDAAQRGLKSGDIAEIYNERGRLHIRVKVTDRVLPGVIAVPQGAWRSLDTTGVDTGGCINTLTSWHPSPFAKGNPQHTNLVEVKRA
>NZ_CP049942.1|WP_004250735.1|2453588_2454845_+|mechanosensitive-ion-channel-family-protein
MQQQLLTWIRQFNEEYAQITSLLLVLLIIFVVALVLHFILHKLVLPKLSKAISKYDQKWQLSFEINKLFSRFAFLIQGVVINIQALLWMGPGKTQEILTTTAQAWCLLFGLLMIFSIMDLCLQIMRNSPSFGRLPLRGIFQSLKLVASVLIGIMIVSLLIGKSPLILLSGLGAMTAVLMLVFKDPIMGLVAGIQLSANNMISLGDWLEMPKYGADGAVVDISLTTVKVRNWDNTVTTIPTYSLISDSFKNWQAMTQSGGRRIKRSLSLDINSIYFLDQENIDKLEKAQLLEPYIKSKVGEISSYNASLCHEHQMPLNQRGMTNVGTFRAYVEAYLKNHPKIHKQMTIMVRQLAPTSEGLPIEIYAFTNTTVWVEYEAIQSDIFDHIFAILPQFGLRIHQSPTGSDVRALKFPTNIDTP
>NZ_CP049942.1|WP_004243604.1|2452297_2452876_+|HdeD-family-acid-resistance-protein
MLDINKNNLSQLTEKLVKKQCTLMSIIAMLGLLAGIICIINPFSSGVVVSVFLGVVFFACAITSIMAAFNSRISSGWSMLITLLAGFIYLFLGYIFITDPLNGMLSLAFIIGYLFIFAGILRLVLGFKQIKDSFYGWFNILVGFLDLVLAYFLLAFGPETSITLVMALIGIQLILSSITILSIASAIKRMTR
>NZ_CP049942.1|WP_036971140.1|2451253_2452111_-|D-amino-acid-transaminase
MSEIVYLNNQFVPKEQANISVFDRGFLFADAVYEVTAVINGQLIDFEGHFQRLQRSCKALSMPFSLTKEQLKEIHEQLIDKNHLHEGLIYLQVTRGADSSRFFDFPSSSVAPTLVLFVQHSTVVNHPNASKGISVVSVEDIRWQRCDIKTVALLAACLAKHHAHQQGADDAIFIKEGYITEGSSSNFFIVNQQDEIITRPLSQDILPGITRQAIIQLAKEQKLTIIERLFTLEEAKQAKEAFISSATTLIWPVISIDNEKINQGKVGALSQRLREIYLEKAGVKP
>NZ_CP049942.1|WP_004250737.1|2450630_2451191_+|helix-turn-helix-transcriptional-regulator
MSSPSAPIEIISQSIARERKKAGLSLAEIARRAGIAKSTLSQLEAGQGNPSIETLWAICVALNIPFSQLISSPKPEVKVIRKGDGFKISAEKAYYHAFLLSSCPNGAKRDIYTVIAQPGKDRVSDPHSKNVTEHILIISGRAIVGTLDNQQELSPGDYICYPGDVTHVLRALEPDTTAVMIIEHHN
>NZ_CP049942.1|WP_012368078.1|2449883_2450546_-|branched-chain-amino-acid-ABC-transporter-permease
MHINSRLDNNVLRDILLVSLADGIVGISYGALAHTQGFDFWVPLSLSIFVLAGASEFLFIGVVAMGGSAIYAALAGLMVNARHIPFSMAVKELPGKGIKSLLGFHVLNDESVVFGLSQSTAEQNRLAFWACGLGILLMWPLGTMLGVYLGSFIVDIKMLGLDAMFPAIILALSLPALKNKLTRKAAIIGSVIALATTLFLPAGIPVLLSLLGVLFVVRKI
>NZ_CP049942.1|WP_004243615.1|2461832_2462489_-|DUF2612-domain-containing-protein
MNIQQFDYHSDLLQAILWQYENADKLKSLAHFKADYFHQSTVLFWQNWYRDIFNIDTANDFGLAVWARILDVPLGIDISPSEKTKIGFGFGKKKANFNANFRRNTDYTLSLTLDQKRMLIRMRYFNLTQSPTVTNINQFLKRFFWRGESKVFVLDPFDMTYMYYVFNFNPDERLRLLLENFDLMPRPSGVGVKYRIITKKAFGYGSYRKNFLKSNFGE
>NZ_CP049942.1|WP_017628010.1|2462485_2463673_-|hypothetical-protein
MADYRYINNKGVIVPDTAALRKEVEDEFRTVFGQSINLSPETPQGVLATMEIENRDAIVRNNAELANQINPDIAGGIFLDAIWALMGGERINATHSYLSNVEFMGVPGTIIPKGSQALTINGAVFETLTSLIIADTGKITGDMRAKEYGPITCGIGQLNKVASSVLGWEKVNNTTHAIIGRYAESDIKARRRRKQTLAKNTISVAQAITSSLYELAGVNSLSFRENFTDKTLTIDGISLLPHSIYVCVEGGDSHEIANVLLRTKTIGAAFNGDIEINLLEPASGQEYPIKFSRPKEVTIFCKVTVKKSSFDAQTIIPDALEKWSHGEIEGDNGLVVGRDVSPFEISAAVNAVEPHLFVTKVELSTDGKNWHVALIPIAINQIARLPKGAIQVVMV
>NZ_CP049942.1|WP_004243617.1|2463665_2464010_-|hypothetical-protein
MRTFAINQHNDLVIDAKGDLQICDNDEAVKNLCQHFIKAVRGEMLHKKDKGIPYWSATFSRQVDIPLFEMAFRQRLAEIEEVVAISHFNAFLDNGVLKYQADIRTIYGGFTLHG
>NZ_CP049942.1|WP_004243621.1|2464006_2464699_-|hypothetical-protein
MSKPNNDIASVGSLAGAFSSAFRHLMMNTDDMLPATVIDYDEKSNRAVIKPLVMMLTTDNQTISRAPVANIPVFRFGGGGFFIRAPIKAGDFGWLKANDRDISLIFQRGGLEDRPNTTRLHTFSDAMFFPDTLKGWVIDGKNIDALVIQSMDGSVCFSLHNDKVVLETPKYEINARETIFTGNVTVNGNYAVNGNSDSQGGVMRHNGKDIGSTHRHSGVQAGKDNTGSPI
>NZ_CP049942.1|WP_004243622.1|2464701_2465514_-|hypothetical-protein
MDLRRIRLGIEVGERLQWYEGLRISASGTKYANPLQNECNVTISGLNAQTRDYLLTETSPYNNNKQTRRLYLEVGRVNTGLLSLFIGDIVSAEIDSPPDVTLTLSAKTSHQSAGKIISSSGGTMRRLSEIALAIADDCGVKLDFQATDKNIANWYYCGSALHQIERLQEAGDVKAFIDDDTLFVKDDDKALKSRLRILNMNSGMIGIPKATESGLTVSYLIDSTSELGGMLRLESKLNPSLNGDYIIEQLAFSVASHEADFNYTAICKRA
>NZ_CP049942.1|WP_004243623.1|2465482_2465803_-|hypothetical-protein
MQEIPLQAIPNQRFSVAIAGVNWQLTLKVANQTMFCDIEREGEILITGMRLVANTPIIPYRYLNQGINLMFLTEHDALPWYEEFTKTQSLVYWSEEDGSSTNKARN
>NZ_CP049942.1|WP_004250719.1|2465815_2466304_-|hypothetical-protein
MITEVRIFDLASFTTLFDSVNPTQVTIDDSHQAITFTVENGESRSDHVVINPISISISLLLTGDIANAYATIKQLYDENTLVGIQTRVSTYQPMLLESLSHDEDPSKVDAIELKLKFIEWKSIEPEYNKKSAKSTKKPKQSSTINRGNVKSKKSMPIGKKQG
>NZ_CP049942.1|WP_049198725.1|2466306_2468610_-|hypothetical-protein
MSLLPVFSQVLTLDAEVSDNALNNIRKSTNEILEEMKKIEQGASAGINRFFAFVQEIAASFNELSLEPEINLSVDNQEIIQASETVENSIQQIVKTALSSTQEFDTFLQNILTGLTSLSLDEPINIEINSGETQEKIHSITSSIDALKDAMSVLNYTRNLLSNDVDSDASHLANLNAEYQAMEDQLASLNNELTLLTEAEKKNKENKLVIDEVIKNLGADYDQFISTMQTQGIKAAIEEAQAQRRLSSSVDETGKSYQQTVDKMKDFILNAIGATDIMGTLQKVFSASLERSQEIESLDKLSKKMGVAAIDIDAFSGAMAAIGGTKEAAQADLAAMATAFDDTQDPIEQLLQVADNVKNMSFDDAQKELEKLGVVDDKTIELMMKGRQELERTMGVQKQFSGINDDSIESAIQLNATIHKFSQLAAQFKNNFLDMIIPTLAKGMEWFDKLVDFCVKNKDIVISFFSAIGAAVAIYYLPVMISAAASTLAMALPIIAIATVIGLLGVAFKLVYDDIMNFINGNDSMIGRILEKYPVLKSVIMTIWQAWQSFFEYLKEAVTVVADFVIAAWDLISNSFNQFIQTLEIGINNLIAWGQSIIDIFIFVSDSVVSLFEWMWGCVEKILDFVDEKINLIQDIWQSAKSFFGMDDEEKEIRVVQKVERRLTNEGELDYILPQSQTATRYYSPMQEVKSLNNGLAISSNNSLNPMTSQMISNQSSIKNESNVQIGEIKIETQATNGAEVVKEIKKSYTEQEAKNISQNHSSGWRV
>NZ_CP049942.1|WP_004243627.1|2468692_2469151_-|hypothetical-protein
MLIKPKEITVIDSDRQQHTFIISRLPATIGREILAKYPLSNAPKIGDYEVSKEAMLKMMAYVAVEKEGQEIYLKTSTLIDNHVPDGEALIRLELEMLKYNTSFFGNGGSQNFLQYLLGKLSGSLPSIIKTLMASLPSSSQPASPLSQNSKQP
>NZ_CP049942.1|WP_012368088.1|2469210_2469663_-|hypothetical-protein
MNDISATGLSLIIQASKTFPAGIPITTFSDEGDPLDLPTVNITQTAVDINGNLVSWSSPTPQTVTINVLAGSEEDENLAILFDANTARRGRRPASDVITLVASYGDGSITTARNGRITDGCRGNSVAGAGRLKSKQYTFIFQDFDRVRAR

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Crispr_ID: NZ_CP049942_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049942_3

2820591-2820733

Orphan

Consensus_repeat	Method
GGTGATATCAATTTCACAGGTGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP049942_3

>merge|NZ_CP049942|3|2820591-2820733|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGGTGGCGCTGGTAATGTCATTAAATCTGATGTTACACAAGGTGATATCAATTTTACAGGTGGCGGCATAGCAAATGTAATAAAACATAACTCTAATTATGGTAATACCAACTTTACTGGTGG

>NZ_CP049942|3|3|2820591-2820733|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGG	TGGCGCTGGTAATGTCATTAAATCTGATGTTACACAA
GGTGATATCAATTTTACAGGTGG	CGGCATAGCAAATGTAATAAAACATAACTCTAATTAT
GGTAATACCAACTTTACTGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049942.1\|WP_004250364.1\|2834814_2836686_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP049942.1\|WP_004244084.1\|2841378_2841822_+\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP049942.1\|WP_012368227.1\|2839528_2840299_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP049942.1\|WP_004244080.1\|2836698_2839365_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP049942.1\|WP_004248546.1\|2840625_2841168_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP049942.1\|WP_004244072.1\|2818675_2818879_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_049213446.1\|2843020_2844220_+\|transporter	unknown	unknown	gnl\|CDD\|182559
NZ_CP049942.1\|WP_004244089.1\|2845114_2845867_+\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|235389
NZ_CP049942.1\|WP_004244067.1\|2815257_2817855_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP049942.1\|WP_004248541.1\|2818528_2818675_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004250359.1\|2841920_2843024_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|236694
NZ_CP049942.1\|WP_004244066.1\|2814715_2815087_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP049942.1\|WP_004244060.1\|2811261_2811483_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_004244077.1\|2833185_2834613_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP049942.1\|WP_004244059.1\|2810159_2811059_+\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NZ_CP049942.1\|WP_049198702.1\|2813763_2814624_-\|small-conductance-mechanosensitive-channel-MscS	unknown	unknown	gnl\|CDD\|182386
NZ_CP049942.1\|WP_004244087.1\|2844497_2845112_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP049942.1\|WP_004248538.1\|2812146_2812881_-\|oxidative-stress-defense-protein	unknown	unknown	gnl\|CDD\|236840
NZ_CP049942.1\|WP_017827180.1\|2811550_2811979_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049942.1\|WP_049198704.1\|2812971_2813595_-\|arginine-exporter-ArgO	unknown	unknown	gnl\|CDD\|236463

Protein	Function_ID	Function_description	E-value
NZ_CP049942.1\|WP_004250364.1\|2834814_2836686_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP049942.1\|WP_004244084.1\|2841378_2841822_+\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	5.15077e-55
NZ_CP049942.1\|WP_012368227.1\|2839528_2840299_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	1.72207e-168
NZ_CP049942.1\|WP_004248546.1\|2840625_2841168_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	5.04074e-131
NZ_CP049942.1\|WP_049213446.1\|2843020_2844220_+\|transporter	gnl\|CDD\|182559	PRK10573, PRK10573, protein transport protein HofC.	2.35448e-107
NZ_CP049942.1\|WP_004244089.1\|2845114_2845867_+\|cell-division-protein-ZapD	gnl\|CDD\|235389	PRK05287, PRK05287, cell division protein ZapD.	9.25043e-119
NZ_CP049942.1\|WP_004244067.1\|2815257_2817855_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP049942.1\|WP_004244080.1\|2836698_2839365_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP049942.1\|WP_004250359.1\|2841920_2843024_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	5.50551e-180
NZ_CP049942.1\|WP_004244066.1\|2814715_2815087_-\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	9.00597e-61
NZ_CP049942.1\|WP_004244077.1\|2833185_2834613_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP049942.1\|WP_004244059.1\|2810159_2811059_+\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	1.29397e-161
NZ_CP049942.1\|WP_049198702.1\|2813763_2814624_-\|small-conductance-mechanosensitive-channel-MscS	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	4.9958e-120
NZ_CP049942.1\|WP_004244087.1\|2844497_2845112_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.55125e-90
NZ_CP049942.1\|WP_004248538.1\|2812146_2812881_-\|oxidative-stress-defense-protein	gnl\|CDD\|236840	PRK11087, PRK11087, oxidative stress defense protein; Provisional.	6.92322e-114
NZ_CP049942.1\|WP_049198704.1\|2812971_2813595_-\|arginine-exporter-ArgO	gnl\|CDD\|236463	PRK09304, PRK09304, arginine exporter ArgO.	1.4749e-119

>NZ_CP049942.1|WP_004244072.1|2818675_2818879_+|hypothetical-protein
MIHIPASGFIYMASIIKSMLENPCINKEFEKLIAADLLPILQNETNMTENFTALHLIKKTNNRRIIL
>NZ_CP049942.1|WP_004248541.1|2818528_2818675_+|hypothetical-protein
MAINEKFVQEISSINYNNSIFSLYFVGQDPHKIAQGIMPEKDEELALK
>NZ_CP049942.1|WP_004244067.1|2815257_2817855_-|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGVVPKPLDATQTAALVELLKSPPKGEEEFLLDLIVNRVPPGVDEAAYVKAGFLTALAKGETTSPLITPEKAVELLGTMQGGYNIHALIEALDNDKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNVYAKQIMQSWADGEWFTERPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGSVGPIKQIEALNKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKRGGGVVLGGKIAPIFFNTMEDAGALPIEVDVSKLNMGDVIDIYPYKGEIRNHETNELLETFALKTEVLIDEVRAGGRIPLIIGRGLTSKARSALGLPPSTLFRHAKAVEQSDRGFSLAQKMVGRACGRDGIRPGEYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVHAIPLYAIKEGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASAERSAAGCTIKLDKAPIIEYLQSNIVLLKWMIAEGYGDRRTLERRITAMENWLADPQLLEADADAEYAAVIEIDLNEIKEPILCAPNDPDDARLLSEVANSKIDEVFIGSCMTNIGHFRAAGKLLDQHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEVPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPEPQEYLDFINKVDETAEDTYRYLNFDQLEQYTDKATQVIFQTTV
>NZ_CP049942.1|WP_004244066.1|2814715_2815087_-|YacL-family-protein
MDYEFQRDLTGGILARFSMDHEAIGYWLNDEIQGDISLIDQILTEMDEVKGSEKQWQLIGKEYSLSIDDEEIMVRANTLHFETDDLEEGMSYYDNESIAFCGLDDFATMLQKYRLFILENRRS
>NZ_CP049942.1|WP_049198702.1|2813763_2814624_-|small-conductance-mechanosensitive-channel-MscS
MNELPASLDEATGWFVANQELFIQYAVNIVAAFLILFIGLFVAKMVSKGVARILTLRHIDATVVTFLSVLVRYTVIAFTLIAVLGRLGVQTASVIAVLGAAGLAVGLALQGSLSNFAAGVLIVIFRPIRAGEYVMIGAVEGTVRDVQIFSTTLRSADDRIIVIPNSKIISSEVINLSREPNRRTQIIVGVAYDADIDKVKQVLGDVVAQDKRIQHNQGVTIRLHEMAPSSLNFVVRVWTTNDDAWPVYWDLMENFKRALDANNIGIPFPQMDVYMHQAQNTVMKVE
>NZ_CP049942.1|WP_049198704.1|2812971_2813595_-|arginine-exporter-ArgO
MLTTFFQGFLLSAAMILPIGAQNAFVLQQGSKKQYHLMSAFLCALSDVILISGGVFGGSALLSQSEYLLLLITWGGVAFLLWYGWNAFKTAFTKEIELSQHKNQVKSRWRVIVTLVAVTWLNPHVYLDTFVVLGSIGGQLSVELRPWFTFGAVFASISWFFALSLLAAWFSPILSQVTAQRIINLFVGCVMWFIALQLAAQGWKNLF
>NZ_CP049942.1|WP_004248538.1|2812146_2812881_-|oxidative-stress-defense-protein
MKVKAMVLASMLALGAPSIALAGAVPEGPHITTSGNATIKATPDMATLNIQVSEKAKDAAQAKKQVDERVAKYFAFLKENGVTKEDIDAANIRTQPNYEYDKKAERSVINGYTATRTVDVKIKKLDQLNTLLDGALAAGLNEINNVEFGVNDPEQYKAKAREVAIKNAIQQASSVAKGFGADLGAVYSVSYRAPEATPYPIARMKMDAMALSAPSPEAVKETYQQQSIEFKDYVDVVFELKTAK
>NZ_CP049942.1|WP_017827180.1|2811550_2811979_+|hypothetical-protein
MADIATLIAKWRNGLEVEIYTENYEFRYGRIKSSRFNASGEESVYYATYFHTRAKPKDNDPLLIITFDPVVGQDDFMFIETIIDHRTYFGSPGAGKTKSHIERRSSDLKRRIENGKKISSEPSSSVQNVNKNNNDSPDQENK
>NZ_CP049942.1|WP_004244060.1|2811261_2811483_+|hypothetical-protein
MSTFIRRSRNVALAIDAGRKSGSANIEGNTPADIQASLLKSLGEFTASIPTTKQQPYVKGSHGANHKKTYFGR
>NZ_CP049942.1|WP_004244059.1|2810159_2811059_+|LysR-family-transcriptional-regulator-ArgP
MKRPDYRALQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPQPTEQGQKLLALLHQVEMLEEQWLGDENSGSTPLLLSLAVNADSLATWLLPALHPVLTQLPIRLNIQVEDETRTQERLRRGEVVGAISIQPQALPSCLVDQLGALDYLFVASPDFAQRYFANGVTKSSLLKAPAVAFDHLDDMHQAFLQQNFGLSPGSVPCHIVNSSEAFVQLAKQGSTCCMIPHLQIADELKSGELIDLTPGLCQRRMLYWHRFAPESRTMRKVTDALLDYGRKVLKQDEE
>NZ_CP049942.1|WP_004244077.1|2833185_2834613_-|dihydrolipoyl-dehydrogenase
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVAKVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFTGSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
>NZ_CP049942.1|WP_004250364.1|2834814_2836686_-|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MSIEIKVPDIGADEVEVTEVMVKVGDRIEEEQSLITVEGDKASMEVPSPQAGIVKEIKIAVGDKVETGSLIMIFDTEEGAQAPAQEAAPAPSAAAPAASELKEVHVPDIGGDEVEVTEVMVNVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVSTGSLIMVFEVAGSAPAPSASAPAPAASAPAASAIKDVNVPDIGGDEVEVTEVMVKVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVKTGSLIMTFEVAGAAPAAQAPAAPAASTSAAPAPSAPAKAPASAPAAKEEFVENEAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILREDVQSYVKELIKRAESAPANAGGGLPGMLPWPKVDFSKFGEIEEVELSRIQKISGANLSRNWVMIPHVNLFDEADITEVEEFRKQQNKEAEKKKLDVKITPLVFVMKAAAKALADMPRFNSSISEDGQKLILKKYINIGIAVDTPNGLVVPVFKDVNKKGILELSYELAEVSKKARAGKLTASDMQGGCFTISSLGGIGTTGFAPIVNAPEVAIMGLSRSSMKPVWNGKEFVPRLMLPMSLSFDHRVIDGADGARFITLINQYMSDLRRLVM
>NZ_CP049942.1|WP_004244080.1|2836698_2839365_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA
>NZ_CP049942.1|WP_012368227.1|2839528_2840299_-|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKASHARIIDAHDKGDIAAESDAVLQYQLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYTRKEMLTAVSEHRTQIYQAIINREPEAAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF
>NZ_CP049942.1|WP_004248546.1|2840625_2841168_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MEIKQGWLTGVKLVPSPNYDNRPEGEIPSLLIIHNISLPPGQFGGPYIDQLFTNTLAVDDHPFFNEIAHLRVSAHCLIRRDGEIVQYVPFTARAWHAGVSFYKGREKCNDFSIGIELEGTDECDFTPQQYQQLSTLTQQLIEHYPGIKENITGHSDVAPGRKTDPGPHFNWSYYRALLAK
>NZ_CP049942.1|WP_004244084.1|2841378_2841822_+|prepilin-peptidase-dependent-pilin
MNTLNYHSTENGFTLMELMIVIAIISILSSVAIPAYHGYIQKAALTDVLQTLSPYRSAVELCHYEHQYNQCHADASFMPQQFRSRYLTDIHVANGVISAKGKAQLEGLTIVMTPATNSKETLPHWQINCTSTNTALQTLCHKVFKSH
>NZ_CP049942.1|WP_004250359.1|2841920_2843024_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MNNTIHTATEFIEQLLRHSLAQRVSDLHLEPQQNSLRIRARIDNHLVLFSPPDNQLANEILTRLKILANINIAEKRLPQDGQFNWSYQKNNYSIRVATLPTLYGEKIVLRLMNNLQQPQLAQLGFQTIHLTLLKKYLTQPQGMILVTGPTGSGKTLTLYSCLQYLNKDNRNINSIEDPIELPLHGINQTQITEKAGITFATILRALLRQDPDVIMIGEIRDQQTAEIAIKAAQTGHLVLSTLHTNSTQATLARLANLGIAKDLIDSCVKLIISQRLVRCLCSNCKYPSPEQKNFIINNQQIILPNWQATGCQFCYSGYKGRTAIYDCFELAKQSLPSPYALFNSGIELIKKGITSLDEVYQVVGDIE
>NZ_CP049942.1|WP_049213446.1|2843020_2844220_+|transporter
MKLHFIYRYNALTYQGKWLSGNVVAQSKHEVIDQLIQQQKLPVKIRLYRVIIFQNSDKQYRIQLLEQLALLLHSGLALLPALTLLKEECRYLHWQCVLNDIIFHLNQGGALSKQLSHYPLYFPANLTHFIYIGEESGKLDEVLLLQTTQLKNQRDLIKKIIKAFQYPLFLLLTLIVITISMLIYVLPEYQSLYSAFNTELPTLTLTLIRCSQWFSQYSLIILLFILIISYSYYTIKHHNAKFRDIEQRCWLNLPYLGILLRYHQLHIIFQIMTIIQQAGLPLLQGLKIITEQLTHSLYQRALTDMIAHITQGKSLSSFMRHNPLFPPICYQFISSAENSGQLQFFCQQLTHWFYHQLEERLDSVKTWLEPILMTLIALITGTLIIAMYLPVLQLGDTIH
>NZ_CP049942.1|WP_004244087.1|2844497_2845112_+|dephospho-CoA-kinase
MTYTVALTGGIGSGKTTIANGFASLGVPLVDADVIARLVVEPDSPGLKALQQHFGDTILLPDGKLNRAQLRHIIFQNQQEKAWVNQLLHPLIQQETQKQIQQIRAPYFIWVVPLLVENKLTHLADRILVVDVTEEEQITRTMQRDGVSRDHVLKILQAQAKREQRLAVADDIIENHDNSLNQDEQIKQLHQHYLELAQKSNTGQ
>NZ_CP049942.1|WP_004244089.1|2845114_2845867_+|cell-division-protein-ZapD
MSEETSTIIFEHPLNEKMRSWLRIENSLIQLNSFQSINSLSSALSFFRAVSEFIEVLDRGEIRAELLKELEKRQKKLQQWLSFPNVDKEIVSHIINELSESACALSKAPRIGQHLKQDKIISLVKQRLSIPGGCCSFDVPTLHLWLNLPQTVRTEKLTCWQEGLYPLQNALNALLTLIRQSDTFKPVLSHNGFYQDSTEEGELLRIKLLASQQIYPQVSGHKNRYAIRFLPLDSEHGTIPSELPFEISCC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

908601 : 966977

Organic_Lake_phycodnavirus(50.0%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004247335.1\|908601_910077_-\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_049210457.1\|910665_912729_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_060555282.1\|912957_914922_-\|protease	metalloprotease	NA	NA	NA	NA
WP_165708627.1\|915228_917166_-\|protease	metalloprotease	NA	NA	NA	NA
WP_004244894.1\|917633_918518_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004247342.1\|918511_919768_-	Zn-dependent hydrolase	NA	NA	NA	NA
WP_004247343.1\|920136_921522_-	carbohydrate porin	NA	NA	NA	NA
WP_004252426.1\|921576_922221_-	beta-phosphoglucomutase	NA	NA	NA	NA
WP_049198673.1\|922213_924931_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA
WP_049198675.1\|924956_926378_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_049198678.1\|926496_927465_-	HTH-type transcriptional regulator TreR	NA	NA	NA	NA
WP_004244887.1\|927627_928080_-	hypothetical protein	NA	NA	NA	NA
WP_165708628.1\|928076_928901_-	hypothetical protein	NA	NA	NA	NA
WP_004247348.1\|929540_929825_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004244882.1\|929969_930527_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_049198682.1\|930599_931178_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_049198684.1\|931229_933734_+	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_049198685.1\|933750_934488_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_004244878.1\|934511_934976_+	hypothetical protein	NA	NA	NA	NA
WP_004244876.1\|934968_935481_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_004244874.1\|935477_936017_+	fimbrial protein	NA	NA	NA	NA
WP_049198688.1\|936028_937090_+	hypothetical protein	NA	NA	NA	NA
WP_049198690.1\|937428_938286_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004244871.1\|938259_939051_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004244870.1\|939691_939997_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_026090475.1\|944702_946640_+	hypothetical protein	NA	NA	NA	NA
WP_001985440.1\|946744_947998_+	TolC family protein	NA	NA	NA	NA
WP_001985442.1\|948022_950185_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	8.0e-29	31.5
WP_001985443.1\|950204_951464_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_004244863.1\|952130_952439_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004244860.1\|956149_956704_+	flavodoxin family protein	NA	NA	NA	NA
WP_001967272.1\|956930_957095_+	hypothetical protein	NA	NA	NA	NA
WP_004247367.1\|957151_957847_+	hypothetical protein	NA	NA	NA	NA
WP_004244857.1\|957869_958790_+	hypothetical protein	NA	NA	NA	NA
WP_004247369.1\|959180_959858_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_004247370.1\|959987_961316_-	putrescine-ornithine antiporter	NA	NA	NA	NA
WP_036905869.1\|961379_963542_-	ornithine decarboxylase SpeF	NA	NA	NA	NA
WP_107034653.1\|963915_964023_-	DUF2618 domain-containing protein	NA	NA	NA	NA
WP_036972277.1\|964381_965122_+	TIGR03747 family integrating conjugative element membrane protein	NA	NA	NA	NA
WP_036900799.1\|965158_965737_+	hypothetical protein	NA	NA	NA	NA
WP_004252392.1\|965740_966010_+	hypothetical protein	NA	NA	NA	NA
WP_036905867.1\|966236_966509_+\|transposase	transposase	NA	NA	NA	NA
WP_004247373.1\|966728_966977_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.9e-07	38.5

DBSCAN-SWA_2

1071208 : 1082355

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246075.1\|1071208_1072408_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6
WP_004247427.1\|1073017_1073986_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.5e-133	71.0
WP_004252248.1\|1074011_1076138_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-205	51.3
WP_004246072.1\|1076166_1076571_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	38.5
WP_004246071.1\|1076582_1076807_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_004246069.1\|1077088_1077562_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246068.1\|1077759_1077969_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_004246058.1\|1078228_1078603_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0
WP_004246057.1\|1078618_1079584_-	lipoyl synthase	NA	NA	NA	NA
WP_004246056.1\|1079685_1080330_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_026090527.1\|1080681_1080945_-	YbeD family protein	NA	NA	NA	NA
WP_004246054.1\|1081143_1082355_-	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	8.6e-105	49.1

DBSCAN-SWA_3

1118228 : 1165568

Morganella_phage(50.0%)

integrase,terminase,tail,lysis,capsid

attL 1118142:1118160|attR 1172475:1172493

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1118142:1118160	attL	NA	NA	NA	NA
WP_165708631.1\|1118228_1119230_-\|integrase	tyrosine-type recombinase/integrase	Q9MCR4	Enterobacteria_phage	9.7e-70	44.0
WP_004246013.1\|1119186_1119432_-	excisionase	NA	NA	NA	NA
WP_165708632.1\|1120582_1121278_-	hypothetical protein	NA	NA	NA	NA
WP_017827452.1\|1121349_1121859_-	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	4.9e-54	57.3
WP_165708633.1\|1121858_1122470_-	single-stranded DNA-binding protein	A0A1W6JP21	Morganella_phage	2.6e-73	68.7
WP_017628824.1\|1122471_1122792_-	hypothetical protein	NA	NA	NA	NA
WP_017628823.1\|1122788_1122941_-	hypothetical protein	NA	NA	NA	NA
WP_017628822.1\|1122937_1123192_-	hypothetical protein	NA	NA	NA	NA
WP_164484711.1\|1123199_1123355_-	hypothetical protein	NA	NA	NA	NA
WP_049256525.1\|1123443_1123671_-	hypothetical protein	NA	NA	NA	NA
WP_049206628.1\|1123793_1124069_-	hypothetical protein	NA	NA	NA	NA
WP_165708634.1\|1124399_1124567_+	hypothetical protein	NA	NA	NA	NA
WP_165708635.1\|1124563_1124842_-	hypothetical protein	A0A1P8DTK1	Proteus_phage	2.0e-33	84.6
WP_165708636.1\|1125342_1126368_-	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	1.5e-46	34.0
WP_165708637.1\|1126400_1127084_-	LexA family transcriptional regulator	A0A1P8DTH0	Proteus_phage	7.4e-130	96.9
WP_004245989.1\|1127166_1127376_+	helix-turn-helix transcriptional regulator	A0A1P8DTF8	Proteus_phage	3.3e-33	98.6
WP_126656354.1\|1127506_1127854_+	hypothetical protein	NA	NA	NA	NA
WP_165708638.1\|1127950_1128124_+	hypothetical protein	NA	NA	NA	NA
WP_012367617.1\|1128120_1128888_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.5e-22	51.9
WP_165708639.1\|1128887_1130273_+	AAA family ATPase	Q716D2	Shigella_phage	8.0e-115	47.9
WP_049195179.1\|1130298_1130748_+	hypothetical protein	A0A2H4FNF5	Salmonella_phage	2.9e-13	32.2
WP_004245984.1\|1130826_1131117_+	DUF1364 domain-containing protein	A0A2H4JIC4	uncultured_Caudovirales_phage	7.2e-34	68.1
WP_004245983.1\|1131113_1131470_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.2e-44	71.6
WP_004245982.1\|1131469_1132102_+	antitermination protein	I6PDF8	Cronobacter_phage	3.3e-23	34.3
WP_004247148.1\|1132413_1132935_+	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_004247488.1\|1133093_1133516_+	hypothetical protein	NA	NA	NA	NA
WP_004247489.1\|1133569_1133839_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	6.0e-19	53.5
WP_017628809.1\|1133838_1134309_+	lysozyme	A0A1W6JNW4	Morganella_phage	4.4e-49	62.5
WP_012367623.1\|1134290_1134449_+	hypothetical protein	NA	NA	NA	NA
WP_012367624.1\|1134451_1134913_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	6.3e-24	45.8
WP_017628807.1\|1135201_1135627_+	hypothetical protein	NA	NA	NA	NA
WP_017628806.1\|1135749_1135989_+	hypothetical protein	NA	NA	NA	NA
WP_017628805.1\|1136306_1136858_-	hypothetical protein	NA	NA	NA	NA
WP_004247495.1\|1136922_1137525_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.3e-65	69.6
WP_151252785.1\|1137527_1139012_+\|terminase	terminase	A0A1W6JNY3	Morganella_phage	3.6e-270	88.7
WP_017628802.1\|1139013_1140390_+	DUF4055 domain-containing protein	A0A1W6JNV0	Morganella_phage	9.1e-212	78.6
WP_017628801.1\|1140398_1141463_+\|capsid	minor capsid protein	A0A1W6JNT7	Morganella_phage	9.2e-103	51.4
WP_017628800.1\|1141537_1142224_+	hypothetical protein	A0A1W6JNU9	Morganella_phage	3.4e-74	81.1
WP_017827430.1\|1142229_1143180_+	hypothetical protein	A0A1W6JNV5	Morganella_phage	1.3e-153	87.1
WP_017628798.1\|1143222_1143600_+	hypothetical protein	A0A1W6JP09	Morganella_phage	5.8e-44	71.2
WP_165708640.1\|1143601_1143943_+	hypothetical protein	A0A1W6JNW7	Morganella_phage	1.1e-52	81.4
WP_165708641.1\|1143945_1144314_+	HK97 gp10 family phage protein	A0A1W6JNX7	Morganella_phage	4.8e-51	82.8
WP_165708642.1\|1144310_1144682_+	hypothetical protein	A0A1W6JNU7	Morganella_phage	9.5e-47	70.7
WP_087726543.1\|1144747_1145503_+	DNA breaking-rejoining protein	A0A1W6JNT1	Morganella_phage	1.5e-107	80.1
WP_107336905.1\|1145552_1146245_+	hypothetical protein	A0A1W6JNX2	Morganella_phage	2.4e-91	72.4
WP_004247509.1\|1146287_1146659_+	hypothetical protein	E7C9U7	Salmonella_phage	4.4e-36	65.7
WP_004247510.1\|1146672_1146855_-	hypothetical protein	A0A192Y6A8	Salmonella_phage	3.7e-20	76.3
WP_026090520.1\|1147311_1147503_+	hypothetical protein	NA	NA	NA	NA
WP_017628790.1\|1147465_1148356_+	hypothetical protein	NA	NA	NA	NA
WP_060554545.1\|1148627_1149461_-	antirepressor	I6S627	Salmonella_phage	1.1e-66	55.2
WP_004245955.1\|1149530_1149692_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_060554546.1\|1149805_1150060_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_060554547.1\|1150059_1151073_+	SMEK domain-containing protein	NA	NA	NA	NA
WP_060554549.1\|1151280_1153008_+	DUF2326 domain-containing protein	NA	NA	NA	NA
WP_060556273.1\|1153097_1153820_+	hypothetical protein	NA	NA	NA	NA
WP_165708643.1\|1153887_1157037_+	tape measure protein	A0A1W6JNU2	Morganella_phage	7.0e-98	52.6
WP_163769797.1\|1157052_1157322_+	hypothetical protein	NA	NA	NA	NA
WP_017628783.1\|1157845_1158175_+\|tail	phage tail protein	A0A1W6JNT2	Morganella_phage	9.6e-43	71.6
WP_036908262.1\|1158171_1158870_+\|tail	phage minor tail protein L	A0A1W6JNT8	Morganella_phage	3.1e-115	83.2
WP_017628781.1\|1158873_1159593_+	C40 family peptidase	A0A1W6JNU8	Morganella_phage	2.8e-111	74.9
WP_017628780.1\|1159529_1160096_+\|tail	tail assembly protein	A0A1W6JP03	Morganella_phage	3.1e-49	76.7
WP_165708644.1\|1160095_1164241_+	DUF1983 domain-containing protein	A0A1W6JNW2	Morganella_phage	0.0e+00	75.5
WP_004245936.1\|1164234_1164603_+	hypothetical protein	NA	NA	NA	NA
WP_012367646.1\|1164604_1165219_+	hypothetical protein	NA	NA	NA	NA
WP_036908260.1\|1165268_1165568_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	1.3e-17	55.3
1172475:1172493	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1339605 : 1418585

Bacillus_phage(23.53%)

tRNA,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244558.1\|1339605_1339920_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-13	44.1
WP_004244559.1\|1339950_1342245_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-170	42.9
WP_004244560.1\|1342363_1342582_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_004247616.1\|1342901_1343594_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_049213639.1\|1343595_1345347_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	5.2e-18	22.6
WP_017628444.1\|1345349_1347119_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	3.0e-21	23.5
WP_004252032.1\|1347257_1348217_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.4e-64	45.5
WP_004244566.1\|1348759_1349254_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_124740892.1\|1349381_1353206_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.7e-90	49.3
WP_004244569.1\|1353318_1353924_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_012367706.1\|1353934_1355284_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.8e-79	40.6
WP_004244571.1\|1355417_1356707_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	46.2
WP_004244572.1\|1356887_1357220_-	hypothetical protein	NA	NA	NA	NA
WP_004247622.1\|1357620_1358670_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_049213634.1\|1358742_1359648_-	hypothetical protein	NA	NA	NA	NA
WP_004244575.1\|1360005_1360746_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.3e-20	27.0
WP_004244576.1\|1360853_1363136_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-159	41.6
WP_004244577.1\|1363190_1364045_-	formate transporter FocA	NA	NA	NA	NA
WP_049203590.1\|1364714_1366472_-	30S ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
WP_004244579.1\|1366699_1367737_+	L-asparaginase 2	NA	NA	NA	NA
WP_049199899.1\|1367811_1369077_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_004247627.1\|1369213_1370644_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	2.0e-07	24.6
WP_004244582.1\|1370780_1371869_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.7e-84	47.0
WP_004247629.1\|1372065_1373352_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_004244585.1\|1373640_1374318_+	(d)CMP kinase	NA	NA	NA	NA
WP_004244586.1\|1374499_1376173_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_004244587.1\|1376237_1376525_+	integration host factor subunit beta	A7KV42	Bacillus_phage	8.4e-11	40.0
WP_074923951.1\|1376942_1379312_+	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	6.1e-22	29.7
WP_049213550.1\|1379348_1381094_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	8.4e-61	30.9
WP_004244590.1\|1381090_1382092_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_004247631.1\|1382587_1382803_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_004244593.1\|1383217_1383397_+	hypothetical protein	NA	NA	NA	NA
WP_004244594.1\|1383401_1384163_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_004247632.1\|1384285_1385116_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_004247633.1\|1385495_1386269_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_004244597.1\|1386278_1387601_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_004247634.1\|1387581_1388313_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_165708647.1\|1388309_1392767_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_004244601.1\|1393049_1393703_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	1.0e-99	79.0
WP_004247637.1\|1394109_1394823_+	acid phosphatase AphA	NA	NA	NA	NA
WP_004244603.1\|1395165_1396881_+	L,D-transpeptidase	NA	NA	NA	NA
WP_004244605.1\|1397212_1397761_+	YcbK family protein	NA	NA	NA	NA
WP_049213546.1\|1397810_1398461_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004244607.1\|1398553_1399027_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_004244608.1\|1399117_1400854_-	type VI secretion protein	NA	NA	NA	NA
WP_004244609.1\|1400846_1402202_-	membrane protein	NA	NA	NA	NA
WP_004244610.1\|1402239_1405788_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004244611.1\|1405790_1407254_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004244612.1\|1407259_1407910_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_004244614.1\|1407911_1408700_-	hypothetical protein	NA	NA	NA	NA
WP_036894552.1\|1408703_1411427_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.4e-83	30.5
WP_004244617.1\|1411435_1412191_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004247647.1\|1412183_1413542_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004244619.1\|1413543_1414095_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004247648.1\|1414096_1415365_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_004244621.1\|1415369_1416407_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_049213543.1\|1416370_1418146_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004244624.1\|1418153_1418585_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_5

1504681 : 1541338

Pectobacterium_phage(21.62%)

terminase,integrase,lysis,head

attL 1496806:1496820|attR 1548496:1548510

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1496806:1496820	attL	NA	NA	NA	NA
WP_110229894.1\|1504681_1505857_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J1K3	uncultured_Caudovirales_phage	1.4e-32	29.7
WP_036908181.1\|1505858_1506071_-	hypothetical protein	NA	NA	NA	NA
WP_110229896.1\|1506315_1506573_-	hypothetical protein	NA	NA	NA	NA
WP_004250516.1\|1506600_1506780_-	hypothetical protein	NA	NA	NA	NA
WP_049197309.1\|1506827_1507328_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	8.0e-41	56.4
WP_110229897.1\|1507327_1509295_-	hypothetical protein	H9C157	Pectobacterium_phage	9.9e-119	39.4
WP_004250523.1\|1509307_1509568_-	hypothetical protein	A0A1B1W282	Salmonella_phage	7.9e-08	45.3
WP_060556607.1\|1509567_1509900_-	hypothetical protein	H9C158	Pectobacterium_phage	1.6e-05	39.2
WP_004250527.1\|1510355_1511114_-	helix-turn-helix transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	1.5e-27	39.0
WP_060557709.1\|1511218_1511476_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_020945464.1\|1511516_1511972_+	hypothetical protein	H9C162	Pectobacterium_phage	9.9e-30	55.4
WP_004250533.1\|1511989_1512214_+	hypothetical protein	H9C163	Pectobacterium_phage	9.5e-18	55.4
WP_060558461.1\|1512215_1513046_+	hypothetical protein	H9C164	Pectobacterium_phage	4.4e-36	59.3
WP_060558458.1\|1513035_1514454_+	AAA family ATPase	H9C165	Pectobacterium_phage	4.0e-170	61.0
WP_165375607.1\|1514509_1514848_+	hypothetical protein	H9C172	Pectobacterium_phage	5.1e-31	58.9
WP_165375608.1\|1514925_1515519_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	5.6e-57	54.2
WP_049213704.1\|1515530_1515842_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	5.9e-34	68.8
WP_049210189.1\|1515829_1516360_+	DUF1133 family protein	I6S672	Salmonella_phage	1.1e-35	51.3
WP_004250554.1\|1516524_1516722_+	hypothetical protein	Q9MC00	Enterobacteria_phage	1.1e-09	65.4
WP_049210236.1\|1516876_1517911_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	3.4e-142	71.3
WP_004250558.1\|1518179_1518449_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	3.3e-17	47.8
WP_004250560.1\|1518448_1518919_+	lysozyme	A0A1W6JNW4	Morganella_phage	1.1e-47	57.5
WP_004250562.1\|1518900_1519059_+	hypothetical protein	NA	NA	NA	NA
WP_004250565.1\|1519061_1519523_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	8.5e-13	34.0
WP_036895365.1\|1520012_1521032_+\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	1.9e-36	34.9
WP_165708691.1\|1521230_1522631_+\|terminase	phage terminase large subunit	A0A2K9V3I6	Faecalibacterium_phage	9.7e-84	40.3
WP_049199480.1\|1522632_1524129_+	DUF1073 domain-containing protein	A0A2H4P6S9	Pseudomonas_phage	2.4e-101	43.4
WP_165708692.1\|1524166_1524880_+\|head	phage head morphogenesis protein	A0A2H5BG15	Pseudoalteromonas_phage	2.3e-33	35.1
WP_165708649.1\|1524876_1526139_+	DUF2213 domain-containing protein	Q6IWU4	Burkholderia_phage	7.2e-46	53.7
WP_036908136.1\|1526138_1526636_+	hypothetical protein	NA	NA	NA	NA
WP_004250578.1\|1526635_1527703_+	DUF2184 domain-containing protein	A0A088C493	Shewanella_sp._phage	1.1e-52	39.3
WP_165708650.1\|1527772_1528114_+	hypothetical protein	Q6IWU7	Burkholderia_phage	3.6e-08	34.5
WP_115353730.1\|1528116_1528548_+	DUF4054 domain-containing protein	Q6IWU8	Burkholderia_phage	5.7e-11	31.7
WP_163784804.1\|1528547_1529006_+	hypothetical protein	NA	NA	NA	NA
WP_165708651.1\|1529005_1529377_+	hypothetical protein	NA	NA	NA	NA
WP_036937870.1\|1529363_1529879_+	hypothetical protein	NA	NA	NA	NA
WP_165708652.1\|1529887_1531375_+	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.3e-81	37.7
WP_004250586.1\|1531385_1531838_+	hypothetical protein	I7ATP4	Escherichia_phage	5.8e-22	38.1
WP_004250588.1\|1531878_1532337_+	hypothetical protein	Q6IWV4	Burkholderia_phage	6.7e-26	48.5
WP_165708617.1\|1532420_1534682_+	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	1.1e-20	32.0
WP_109910682.1\|1534678_1535206_+	hypothetical protein	NA	NA	NA	NA
WP_109910681.1\|1535205_1535523_+	hypothetical protein	Q6IWP9	Burkholderia_phage	4.3e-08	32.3
WP_109910680.1\|1535488_1536304_+	hypothetical protein	A1Z005	Burkholderia_virus	2.4e-10	26.0
WP_165708653.1\|1536306_1536999_+	hypothetical protein	A1Z003	Burkholderia_virus	5.9e-34	38.9
WP_004250600.1\|1536995_1537340_+	hypothetical protein	NA	NA	NA	NA
WP_109910678.1\|1537332_1538520_+	hypothetical protein	Q6IWQ3	Burkholderia_phage	2.6e-69	40.6
WP_152964551.1\|1538516_1539173_+	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	9.9e-39	40.3
WP_036908115.1\|1540552_1541338_-	glycosyltransferase family 25 protein	A0A2P1EMF9	Moumouvirus	1.3e-08	30.0
1548496:1548510	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1617727 : 1661746

Salmonella_phage(24.14%)

integrase,portal,terminase,tail,lysis,tRNA,head

attL 1618711:1618725|attR 1633198:1633212

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049198955.1\|1617727_1618831_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
1618711:1618725	attL	NA	NA	NA	NA
WP_004247118.1\|1618936_1619389_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004247841.1\|1619381_1620011_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004247120.1\|1620149_1621403_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	92.6
WP_049220631.1\|1621521_1621935_-	hypothetical protein	NA	NA	NA	NA
WP_063215331.1\|1622464_1623592_-\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	1.7e-126	61.2
WP_036894694.1\|1623572_1623815_-	excisionase	NA	NA	NA	NA
WP_081215061.1\|1623876_1624317_-	SAM-dependent methyltransferase	A0A1W6JP48	Morganella_phage	1.0e-60	76.9
WP_063215333.1\|1624371_1624641_-	hypothetical protein	NA	NA	NA	NA
WP_063215335.1\|1624682_1625180_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	2.3e-48	58.9
WP_063215337.1\|1625238_1626066_-	YfdQ family protein	A0A2R2Z323	Escherichia_phage	1.9e-79	56.2
WP_012367779.1\|1626131_1626506_-	hypothetical protein	Q8HAA1	Salmonella_phage	7.1e-42	70.6
WP_004247128.1\|1627153_1627636_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	3.7e-11	51.4
WP_063215339.1\|1627739_1627979_+	helix-turn-helix domain-containing protein	D0UIL8	Aggregatibacter_phage	2.3e-14	54.8
WP_004247130.1\|1628063_1628522_+	hypothetical protein	K7PJS5	Enterobacterial_phage	3.9e-26	50.8
WP_063215346.1\|1628611_1628821_+	hypothetical protein	NA	NA	NA	NA
WP_063215347.1\|1629002_1630094_+	hypothetical protein	H2DE83	Erwinia_phage	8.2e-30	55.3
WP_063215348.1\|1630188_1631214_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	9.9e-86	47.1
WP_049219743.1\|1631241_1631640_+	antitermination protein	Q8W638	Enterobacteria_phage	1.6e-31	54.3
WP_036894724.1\|1631854_1632574_+	hypothetical protein	NA	NA	NA	NA
WP_036894726.1\|1632583_1633696_+	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	5.8e-39	30.9
1633198:1633212	attR	NA	NA	NA	NA
WP_036894729.1\|1633880_1634543_-	hypothetical protein	NA	NA	NA	NA
WP_004251632.1\|1635232_1635568_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_017827436.1\|1635671_1636598_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_036894733.1\|1637013_1637442_+	hypothetical protein	NA	NA	NA	NA
WP_036894738.1\|1637594_1637846_+	hypothetical protein	NA	NA	NA	NA
WP_036905789.1\|1638289_1638559_+	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	4.6e-19	53.5
WP_063215349.1\|1638558_1639029_+	lysozyme	A0A1W6JNW4	Morganella_phage	9.8e-49	60.5
WP_162837602.1\|1639010_1639169_+	hypothetical protein	NA	NA	NA	NA
WP_099432890.1\|1639171_1639633_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	8.8e-26	48.6
WP_134940271.1\|1639916_1640099_-	hypothetical protein	NA	NA	NA	NA
WP_063215801.1\|1640630_1640927_+	HNH endonuclease	A0A1V0SEA1	Indivirus	3.4e-07	40.3
WP_004244735.1\|1641063_1641663_+\|terminase	terminase	S4TNN3	Salmonella_phage	1.1e-17	32.0
WP_063215800.1\|1641666_1643328_+\|terminase	terminase large subunit	S4TSQ6	Salmonella_phage	1.3e-260	76.1
WP_004244738.1\|1645364_1645586_+	hypothetical protein	NA	NA	NA	NA
WP_063215799.1\|1645633_1646950_+\|portal	phage portal protein	A0A0P0ZCX8	Stx2-converting_phage	6.2e-125	56.7
WP_063215798.1\|1646946_1648242_+	hypothetical protein	S4TNN1	Salmonella_phage	1.2e-40	54.5
WP_004244743.1\|1648238_1648565_+\|head,tail	phage gp6-like head-tail connector protein	S4TSQ3	Salmonella_phage	2.3e-12	35.2
WP_063215797.1\|1648572_1648911_+\|head	phage head closure protein	NA	NA	NA	NA
WP_063215796.1\|1648900_1649374_+	hypothetical protein	A0A0R6PHU8	Moraxella_phage	3.0e-13	33.5
WP_063215795.1\|1649379_1649721_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_063215794.1\|1649730_1650396_+	hypothetical protein	NA	NA	NA	NA
WP_036900961.1\|1650459_1650876_+	hypothetical protein	NA	NA	NA	NA
WP_017628354.1\|1650872_1651151_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_004242485.1\|1651175_1651367_-	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_063215793.1\|1651493_1654769_+\|tail	phage tail tape measure protein	A0A2I2L6P9	Escherichia_phage	8.7e-43	27.7
WP_004251569.1\|1654769_1655366_+	hypothetical protein	S4TSP7	Salmonella_phage	4.6e-51	52.8
WP_036894775.1\|1655365_1655947_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	3.1e-52	50.0
WP_004251562.1\|1655958_1656264_+	hypothetical protein	NA	NA	NA	NA
WP_004251558.1\|1656295_1656694_+	hypothetical protein	A0A059VK01	Pseudomonas_phage	9.2e-32	47.7
WP_165708655.1\|1656693_1660419_+	DUF1983 domain-containing protein	Q7Y3Z3	Yersinia_phage	1.8e-201	52.1
WP_004245936.1\|1660412_1660781_+	hypothetical protein	NA	NA	NA	NA
WP_012367646.1\|1660782_1661397_+	hypothetical protein	NA	NA	NA	NA
WP_036908260.1\|1661446_1661746_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	1.3e-17	55.3

DBSCAN-SWA_7

1908981 : 1918973

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165708661.1\|1908981_1911039_-	potassium-transporting ATPase subunit KdpB	E4ZFI9	Streptococcus_phage	4.8e-31	26.1
WP_004248043.1\|1911050_1912751_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_004242887.1\|1913086_1913773_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_004242888.1\|1913772_1914234_+	nucleoside deaminase	S4VYZ2	Pandoravirus	7.0e-15	34.6
WP_004242890.1\|1914286_1914898_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	7.3e-28	39.1
WP_004242891.1\|1915037_1915898_-	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	3.7e-25	35.5
WP_004242892.1\|1915899_1916517_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	2.2e-72	58.6
WP_049213184.1\|1916528_1918973_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.6e-220	50.4

DBSCAN-SWA_8

2455198 : 2474068

Burkholderia_phage(26.67%)

lysis,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012368081.1\|2455198_2457637_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.0e-261	54.5
WP_049213336.1\|2457648_2458266_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.4e-89	68.3
WP_004243611.1\|2458269_2459046_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.1e-42	39.8
WP_004243612.1\|2459161_2459704_-	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	1.9e-19	34.7
WP_017628013.1\|2460272_2460452_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_108716900.1\|2460591_2461827_-	hypothetical protein	Q6IWQ6	Burkholderia_phage	2.4e-14	34.1
WP_004243615.1\|2461832_2462489_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	2.3e-35	39.9
WP_017628010.1\|2462485_2463673_-	hypothetical protein	A0A2H5BG53	Pseudoalteromonas_phage	1.9e-72	37.7
WP_004243617.1\|2463665_2464010_-	hypothetical protein	NA	NA	NA	NA
WP_004243621.1\|2464006_2464699_-	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	1.2e-29	35.7
WP_004243622.1\|2464701_2465514_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
WP_004243623.1\|2465482_2465803_-	hypothetical protein	NA	NA	NA	NA
WP_004250719.1\|2465815_2466304_-	hypothetical protein	NA	NA	NA	NA
WP_049198725.1\|2466306_2468610_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	2.0e-14	23.1
WP_004243627.1\|2468692_2469151_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
WP_012368088.1\|2469210_2469663_-	hypothetical protein	NA	NA	NA	NA
WP_036971123.1\|2469673_2471161_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.4e-77	35.7
WP_012368090.1\|2471169_2471682_-	hypothetical protein	NA	NA	NA	NA
WP_036895256.1\|2471718_2472168_-\|lysis	lysis protein	NA	NA	NA	NA
WP_004243635.1\|2472164_2472569_-	hypothetical protein	A0A0E3JJ20	Enterobacteria_phage	3.8e-25	45.8
WP_004248367.1\|2472571_2472871_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.9e-21	51.0
WP_004248368.1\|2473252_2474068_-	antitermination protein	M9NZB0	Enterobacteria_phage	3.5e-54	43.4

DBSCAN-SWA_9

3239713 : 3248569

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004245601.1\|3239713_3241282_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-11	33.7
WP_004245602.1\|3241682_3242363_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_004245603.1\|3242459_3243035_-	TerD family protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
WP_004249446.1\|3243111_3243690_-	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	2.4e-33	41.5
WP_004245605.1\|3243757_3244783_-	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
WP_004245607.1\|3244817_3245273_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_049199392.1\|3245297_3246446_-	tellurium resistance protein TerA	NA	NA	NA	NA
WP_004245609.1\|3246446_3247031_-	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	4.2e-17	30.2
WP_049199390.1\|3247423_3248569_+	adenine/guanine phosphoribosyltransferase	A0A172Q0Y1	Acinetobacter_phage	1.6e-31	27.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP049942

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection