CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP021893	Escherichia coli strain 2018-06-4CC	8 crisprs	csa3,PD-DExK,cas1,cas2,cas3,DEDDh,DinG,c2c9_V-U4	0	21	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP021893_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021893_1

1002840-1003356

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

8 spacers

The CRISPR arrays of NZ_AP021893_1

>merge|NZ_AP021893|1|1002840-1003356|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCCCATAATATTAATATAATCCACATGAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCATATCAAGAATTTATGGACTCGGGTGGCAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAAAACCGGGCAATCGCAAAAAGGCGTAATGTGTTCCCCGCGCCAGCGGGGATAAACCTGTGTTTGCGGCATTAACGCTCACCAGCATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTGGTCATGGGTGCTGCTGTTGCAGAGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGATACACGGCTTTGTATTCCGTGCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAGCAATAGTCCATAGATTTGCGAAAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_AP021893|1|1|1002840-1003355|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCATATCAAGAATTTATGGACTCGGGTGGCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

>NZ_AP021893|1|1|1002840-1003355|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCATATCAAGAATTTATGGACTCGGGTGGCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

>NZ_AP021893|1|1|1002840-1003356|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATATCAAGAATTTATGGACTCGGGTGGCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021893.1\|WP_000021321.1\|1008943_1009729_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_AP021893.1\|WP_000036723.1\|999305_1000604_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_AP021893.1\|WP_000254738.1\|996155_996491_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_AP021893.1\|WP_001071648.1\|996561_997353_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_AP021893.1\|WP_000109526.1\|1015037_1015298_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_AP021893.1\|WP_000039688.1\|1004770_1006249_-\|kinase	unknown	unknown	gnl\|CDD\|212662
NZ_AP021893.1\|WP_000059307.1\|1009798_1011253_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_AP021893.1\|WP_000581937.1\|995907_996156_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_AP021893.1\|WP_001268460.1\|1000663_1001536_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_AP021893.1\|WP_001299097.1\|1013437_1014298_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_AP021893.1\|WP_001130266.1\|1014445_1015021_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_AP021893.1\|WP_001288228.1\|1001549_1001690_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021893.1\|WP_170386723.1\|1007664_1008636_+\|IS30-like-element-ISApl1-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_AP021893.1\|WP_000210878.1\|997580_999218_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_AP021893.1\|WP_001299652.1\|1012661_1013441_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_AP021893.1\|WP_001164544.1\|1006275_1007553_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_AP021893.1\|WP_000147666.1\|1011274_1012684_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_AP021893.1\|WP_000046812.1\|992246_993548_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_AP021893.1\|WP_001199973.1\|1001828_1002500_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_AP021893.1\|WP_000226815.1\|993595_995830_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797

Protein	Function_ID	Function_description	E-value
NZ_AP021893.1\|WP_000021321.1\|1008943_1009729_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_AP021893.1\|WP_000036723.1\|999305_1000604_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_AP021893.1\|WP_000254738.1\|996155_996491_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_AP021893.1\|WP_001071648.1\|996561_997353_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_AP021893.1\|WP_000109526.1\|1015037_1015298_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
NZ_AP021893.1\|WP_000039688.1\|1004770_1006249_-\|kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.27376e-109
NZ_AP021893.1\|WP_000059307.1\|1009798_1011253_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.73778e-83
NZ_AP021893.1\|WP_000581937.1\|995907_996156_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_AP021893.1\|WP_001268460.1\|1000663_1001536_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
NZ_AP021893.1\|WP_001299097.1\|1013437_1014298_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_AP021893.1\|WP_001130266.1\|1014445_1015021_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_AP021893.1\|WP_170386723.1\|1007664_1008636_+\|IS30-like-element-ISApl1-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	3.48041e-86
NZ_AP021893.1\|WP_000210878.1\|997580_999218_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_AP021893.1\|WP_001299652.1\|1012661_1013441_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_AP021893.1\|WP_001164544.1\|1006275_1007553_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.60446e-29
NZ_AP021893.1\|WP_000147666.1\|1011274_1012684_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.50431e-51
NZ_AP021893.1\|WP_000046812.1\|992246_993548_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_AP021893.1\|WP_001199973.1\|1001828_1002500_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_AP021893.1\|WP_000226815.1\|993595_995830_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0

>NZ_AP021893.1|WP_001199973.1|1001828_1002500_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_AP021893.1|WP_001288228.1|1001549_1001690_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>NZ_AP021893.1|WP_001268460.1|1000663_1001536_-|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_AP021893.1|WP_000036723.1|999305_1000604_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_AP021893.1|WP_000210878.1|997580_999218_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_AP021893.1|WP_001071648.1|996561_997353_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_AP021893.1|WP_000254738.1|996155_996491_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_AP021893.1|WP_000581937.1|995907_996156_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_AP021893.1|WP_000226815.1|993595_995830_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_AP021893.1|WP_000046812.1|992246_993548_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_AP021893.1|WP_000039688.1|1004770_1006249_-|kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_AP021893.1|WP_001164544.1|1006275_1007553_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_AP021893.1|WP_170386723.1|1007664_1008636_+|IS30-like-element-ISApl1-family-transposase
MSTSYRHLTINEREKIMILLAQGKKQAEIAKALGRSSSTISRELKRHALESYSATNAQNSYLKHRQNSKAQRKLEQPEYFNLVQEKFLTENWSPEQISARLKLEKSELSISYSTIYRGIYSGLFDIGERKASRKLRHKGKTRHTKNHHEKRGKIQISNHLNDRPISAQNRSRFGHWEADTVLGKAGGACLLTLTERKSRFELVKKIPAKKAEAVQKAMIELLDSHILRSITPDRGKEFAQHRLVTEALGVEFYFPEPHQPWTRGTNENTNGLLREYFPKHQDINQWSEVDIQQVINKLNLRPRKCLGWKTPYEVYFKKSLHLV
>NZ_AP021893.1|WP_000021321.1|1008943_1009729_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_AP021893.1|WP_000059307.1|1009798_1011253_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_AP021893.1|WP_000147666.1|1011274_1012684_+|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_AP021893.1|WP_001299652.1|1012661_1013441_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_AP021893.1|WP_001299097.1|1013437_1014298_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_AP021893.1|WP_001130266.1|1014445_1015021_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_AP021893.1|WP_000109526.1|1015037_1015298_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG

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Crispr_ID: NZ_AP021893_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021893_2

1024753-1025635

Unclear

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

14 spacers

cas2,cas1

The CRISPR arrays of NZ_AP021893_2

>merge|NZ_AP021893|2|1024753-1025635|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGACAATCCCACGCCGATAATCTCTATACAGCAAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCACGGAATTGTTATGCTGTTCCCCTGACCGGAGTTCCCCGCGCCAGCGGGGATAAACCGATCCGCCGCCGGTTAACGCTGGACCAGTTCCGGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCGAGTCCGTCAGCGGTGCGCCGCTGCAACAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGACAATGTGAAAAGCTTAATATTCATTACATGAGTTCCCCGCGCCAGCGGGGATAAACCGCGACGTTTTCTAATATCACCCAGCAATCAATTGAGTTCCCCGCGCCAGCGGGGATAAACCGATTTCATCAAAGCATTAAGGGATGGAATAAAGGAGTTCCCCGCGCCAGCGGGGATAAACCGTCATGAATATGGGGAAAACGAACAATCTGTTTGAGTTCCCCGCGCCAGCGGGGATAAACCGAACCTTGTCGGGTCGCCCGTGCGTCATGATGAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCGAAACAACGCCAGCAAAATCGACCGCGAGTTCCCCGCGCCAGCGGGGATAAACCGGGATATAGAGCGGGTACTCGAGCGAAGCGGGGGAGTTCCCCGCGCCAGCGGGGATAAACCGCCAGGACAGGCCGTGACGGTTGCCATTGAGTCGAGTTCCCCGCGCCAGCGGGGATAAACCGTTTTTGTTCTCTTCAAAACGCCGAACAACCAAGAGTTCCCCGCGTCAGCGAGGATAAACCGGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_AP021893|2|2|1024753-1025513|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGTTTTCTAATATCACCCAGCAATCAATT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_AP021893|2|2|1024753-1025635|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGTTTTCTAATATCACCCAGCAATCAATT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_AP021893|2|2|1024753-1025635|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGTTTTCTAATATCACCCAGCAATCAATT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021893.1\|WP_001090361.1\|1027854_1029282_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_AP021893.1\|WP_000108294.1\|1016637_1017000_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_AP021893.1\|WP_000109526.1\|1015037_1015298_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_AP021893.1\|WP_000568943.1\|1031969_1033019_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_AP021893.1\|WP_000039863.1\|1020903_1021638_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_AP021893.1\|WP_000517476.1\|1030453_1030765_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_AP021893.1\|WP_000246138.1\|1030783_1031494_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_AP021893.1\|WP_001246104.1\|1029936_1030260_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_AP021893.1\|WP_001130266.1\|1014445_1015021_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_AP021893.1\|WP_172408762.1\|1015288_1016560_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_AP021893.1\|WP_001219242.1\|1031493_1031973_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_AP021893.1\|WP_000372108.1\|1026944_1027853_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_AP021893.1\|WP_001173673.1\|1029281_1029887_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_AP021893.1\|WP_001416755.1\|1024362_1024647_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_AP021893.1\|WP_172408763.1\|1023443_1024361_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_AP021893.1\|WP_000490404.1\|1025655_1026693_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_AP021893.1\|WP_000526135.1\|1021835_1022294_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|224854
NZ_AP021893.1\|WP_000211907.1\|1017318_1019118_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_AP021893.1\|WP_001290699.1\|1019117_1020830_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_AP021893.1\|WP_001295182.1\|1032999_1033761_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732

Protein	Function_ID	Function_description	E-value
NZ_AP021893.1\|WP_001090361.1\|1027854_1029282_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_AP021893.1\|WP_000108294.1\|1016637_1017000_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	1.01593e-59
NZ_AP021893.1\|WP_000109526.1\|1015037_1015298_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
NZ_AP021893.1\|WP_000568943.1\|1031969_1033019_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_AP021893.1\|WP_000039863.1\|1020903_1021638_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	6.7075e-138
NZ_AP021893.1\|WP_000517476.1\|1030453_1030765_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_AP021893.1\|WP_000246138.1\|1030783_1031494_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_AP021893.1\|WP_001246104.1\|1029936_1030260_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_AP021893.1\|WP_001130266.1\|1014445_1015021_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_AP021893.1\|WP_172408762.1\|1015288_1016560_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	6.08273e-127
NZ_AP021893.1\|WP_001219242.1\|1031493_1031973_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_AP021893.1\|WP_000372108.1\|1026944_1027853_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_AP021893.1\|WP_001173673.1\|1029281_1029887_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_AP021893.1\|WP_001416755.1\|1024362_1024647_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.46262e-62
NZ_AP021893.1\|WP_172408763.1\|1023443_1024361_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.17803e-159
NZ_AP021893.1\|WP_000490404.1\|1025655_1026693_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_AP021893.1\|WP_000526135.1\|1021835_1022294_+\|IS200/IS605-family-transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	6.62797e-46
NZ_AP021893.1\|WP_000211907.1\|1017318_1019118_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_AP021893.1\|WP_001290699.1\|1019117_1020830_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_AP021893.1\|WP_001295182.1\|1032999_1033761_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150

>NZ_AP021893.1|WP_001416755.1|1024362_1024647_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
>NZ_AP021893.1|WP_172408763.1|1023443_1024361_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPVPPEDAQPVAIPLPVSLGDAGHRSS
>NZ_AP021893.1|WP_000526135.1|1021835_1022294_+|IS200/IS605-family-transposase
MGNEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKSVRILEAECCADHIHMLVEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
>NZ_AP021893.1|WP_000039863.1|1020903_1021638_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG
>NZ_AP021893.1|WP_001290699.1|1019117_1020830_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>NZ_AP021893.1|WP_000211907.1|1017318_1019118_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
>NZ_AP021893.1|WP_000108294.1|1016637_1017000_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE
>NZ_AP021893.1|WP_172408762.1|1015288_1016560_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQHPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>NZ_AP021893.1|WP_000109526.1|1015037_1015298_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_AP021893.1|WP_001130266.1|1014445_1015021_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_AP021893.1|WP_000490404.1|1025655_1026693_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_AP021893.1|WP_000372108.1|1026944_1027853_+|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_AP021893.1|WP_001090361.1|1027854_1029282_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_AP021893.1|WP_001173673.1|1029281_1029887_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_AP021893.1|WP_001246104.1|1029936_1030260_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_AP021893.1|WP_000517476.1|1030453_1030765_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_AP021893.1|WP_000246138.1|1030783_1031494_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_AP021893.1|WP_001219242.1|1031493_1031973_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_AP021893.1|WP_000568943.1|1031969_1033019_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_AP021893.1|WP_001295182.1|1032999_1033761_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: NZ_AP021893_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021893_3

1522090-1522207

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021893_3

>merge|NZ_AP021893|3|1522090-1522207|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>NZ_AP021893|3|3|1522090-1522207|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021893.1\|WP_172408773.1\|1513852_1515112_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_AP021893.1\|WP_172408848.1\|1535184_1539579_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_AP021893.1\|WP_000012266.1\|1532732_1534421_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_AP021893.1\|WP_001075164.1\|1522226_1524512_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_AP021893.1\|WP_172408774.1\|1539579_1541229_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_AP021893.1\|WP_001325103.1\|1534417_1535041_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_AP021893.1\|WP_000948732.1\|1517002_1518361_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_AP021893.1\|WP_000150333.1\|1511375_1511561_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182167
NZ_AP021893.1\|WP_000779102.1\|1518365_1519442_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_AP021893.1\|WP_000857257.1\|1515101_1516730_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_AP021893.1\|WP_025670353.1\|1520862_1521993_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_AP021893.1\|WP_000301050.1\|1519904_1520555_+\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_AP021893.1\|WP_001000359.1\|1512665_1513856_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_AP021893.1\|WP_001225852.1\|1541233_1542010_+\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_AP021893.1\|WP_000786544.1\|1542083_1543268_-\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_AP021893.1\|WP_000140569.1\|1511573_1512473_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_AP021893.1\|WP_001220081.1\|1525207_1528960_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_AP021893.1\|WP_001281239.1\|1529956_1532584_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_AP021893.1\|WP_000135040.1\|1520608_1520863_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_AP021893.1\|WP_000990753.1\|1529087_1529810_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350

Protein	Function_ID	Function_description	E-value
NZ_AP021893.1\|WP_172408773.1\|1513852_1515112_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_AP021893.1\|WP_172408848.1\|1535184_1539579_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_AP021893.1\|WP_000012266.1\|1532732_1534421_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_AP021893.1\|WP_001075164.1\|1522226_1524512_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_AP021893.1\|WP_172408774.1\|1539579_1541229_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	3.52642e-126
NZ_AP021893.1\|WP_001325103.1\|1534417_1535041_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	3.71745e-140
NZ_AP021893.1\|WP_000948732.1\|1517002_1518361_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_AP021893.1\|WP_000150333.1\|1511375_1511561_-\|hypothetical-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	1.35852e-30
NZ_AP021893.1\|WP_000779102.1\|1518365_1519442_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_AP021893.1\|WP_000857257.1\|1515101_1516730_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_AP021893.1\|WP_025670353.1\|1520862_1521993_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_AP021893.1\|WP_000301050.1\|1519904_1520555_+\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
NZ_AP021893.1\|WP_001000359.1\|1512665_1513856_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_AP021893.1\|WP_001225852.1\|1541233_1542010_+\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.17009e-153
NZ_AP021893.1\|WP_000786544.1\|1542083_1543268_-\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_AP021893.1\|WP_000140569.1\|1511573_1512473_-\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_AP021893.1\|WP_001220081.1\|1525207_1528960_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_AP021893.1\|WP_001281239.1\|1529956_1532584_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_AP021893.1\|WP_000135040.1\|1520608_1520863_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_AP021893.1\|WP_000990753.1\|1529087_1529810_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.58484e-171

>NZ_AP021893.1|WP_025670353.1|1520862_1521993_-|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKNWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_AP021893.1|WP_000135040.1|1520608_1520863_-|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_AP021893.1|WP_000301050.1|1519904_1520555_+|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_AP021893.1|WP_000779102.1|1518365_1519442_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_AP021893.1|WP_000948732.1|1517002_1518361_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_AP021893.1|WP_000857257.1|1515101_1516730_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_AP021893.1|WP_172408773.1|1513852_1515112_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDSQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_AP021893.1|WP_001000359.1|1512665_1513856_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_AP021893.1|WP_000140569.1|1511573_1512473_-|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH
>NZ_AP021893.1|WP_000150333.1|1511375_1511561_-|hypothetical-protein
MTIAERLRQEGHQIGWQEGKLEGLHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH
>NZ_AP021893.1|WP_001075164.1|1522226_1524512_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_AP021893.1|WP_001220081.1|1525207_1528960_+|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPEPDPTPDPDPTPDPDPTPDPAPVPVYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_AP021893.1|WP_000990753.1|1529087_1529810_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_AP021893.1|WP_001281239.1|1529956_1532584_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATAHGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_AP021893.1|WP_000012266.1|1532732_1534421_+|DUF2138-domain-containing-protein
MSGEKKAEGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDTSFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPISQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKNRPAMVDVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_AP021893.1|WP_001325103.1|1534417_1535041_+|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQAGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_AP021893.1|WP_172408848.1|1535184_1539579_+|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQTKPVEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFQDPLHSSPIVSAPAKLSVLDANGSLLQTVDVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVTLNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>NZ_AP021893.1|WP_172408774.1|1539579_1541229_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALLDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_AP021893.1|WP_001225852.1|1541233_1542010_+|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_AP021893.1|WP_000786544.1|1542083_1543268_-|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTTEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: NZ_AP021893_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021893_4

1844573-1844653

Orphan

Consensus_repeat	Method
TTAACAATTTCTGCGAAATTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021893_4

>merge|NZ_AP021893|4|1844573-1844653|CRISPRCasFinder
TTAACAATTTCTGCGAAATTGAATTTTCTGTCCGCGTTCCACTGGCTTATTTCACGGCTTAACAATTTCTCCGAAATTGAA

>NZ_AP021893|4|4|1844573-1844653|CRISPRCasFinder
TTAACAATTTCTGCGAAATTGAA	TTTTCTGTCCGCGTTCCACTGGCTTATTTCACGGC
TTAACAATTTCTCCGAAATTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021893.1\|WP_172408852.1\|1845430_1845829_-\|Cag-pathogenicity-island-protein-Cag12	unknown	unknown	gnl\|CDD\|372486
NZ_AP021893.1\|WP_172408786.1\|1831363_1832848_-\|UbiD-family-decarboxylase	unknown	unknown	gnl\|CDD\|376697
NZ_AP021893.1\|WP_172408796.1\|1850368_1851052_-\|type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|377310
NZ_AP021893.1\|WP_071941327.1\|1847820_1848207_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021893.1\|WP_172408794.1\|1846882_1847890_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021893.1\|WP_172408789.1\|1836562_1837357_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226297
NZ_AP021893.1\|WP_172408797.1\|1851044_1851182_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021893.1\|WP_044711683.1\|1844729_1845035_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021893.1\|WP_172408791.1\|1839852_1840704_-\|protein-deglycase-HchA	unknown	unknown	gnl\|CDD\|235228
NZ_AP021893.1\|WP_172408851.1\|1842132_1844022_-\|TraM-recognition-domain-containing-protein	unknown	unknown	gnl\|CDD\|274760
NZ_AP021893.1\|WP_172408849.1\|1836012_1836327_-\|recombinase	unknown	unknown	gnl\|CDD\|271188
NZ_AP021893.1\|WP_172408793.1\|1845825_1846845_-\|P-type-DNA-transfer-ATPase-VirB11	unknown	unknown	gnl\|CDD\|274301
NZ_AP021893.1\|WP_172408850.1\|1841368_1842121_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-MobC	unknown	unknown	unknown
NZ_AP021893.1\|WP_172408853.1\|1849469_1850372_-\|P-type-conjugative-transfer-protein-VirB9	unknown	unknown	gnl\|CDD\|274296
NZ_AP021893.1\|WP_172408788.1\|1834773_1835718_+\|DUF1738-domain-containing-protein	unknown	unknown	gnl\|CDD\|226680
NZ_AP021893.1\|WP_172408792.1\|1845083_1845386_-\|kikA-from-plasmid-origin	unknown	unknown	gnl\|CDD\|369359
NZ_AP021893.1\|WP_172408785.1\|1830738_1831353_-\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|223241
NZ_AP021893.1\|WP_172408795.1\|1848199_1849450_-\|TrbI/VirB10-family-protein	unknown	unknown	gnl\|CDD\|319755
NZ_AP021893.1\|WP_172408790.1\|1837372_1839574_+\|family-16-glycosylhydrolase	unknown	unknown	gnl\|CDD\|185684
NZ_AP021893.1\|WP_172408787.1\|1833036_1833918_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182183

Protein	Function_ID	Function_description	E-value
NZ_AP021893.1\|WP_172408786.1\|1831363_1832848_-\|UbiD-family-decarboxylase	gnl\|CDD\|376697	pfam01977, UbiD, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. This family has been characterized as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes. This enzyme catalyzes the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+.	1.25571e-145
NZ_AP021893.1\|WP_172408796.1\|1850368_1851052_-\|type-IV-secretion-system-protein	gnl\|CDD\|377310	pfam04335, VirB8, VirB8 protein. VirB8 is a bacterial virulence protein with cytoplasmic, transmembrane, and periplasmic regions. It is thought that it is a primary constituent of a DNA transporter. The periplasmic region interacts with VirB9, VirB10, and itself. This family also includes the conjugal transfer protein family TrbF, a family of proteins known to be involved in conjugal transfer. The TrbF protein is thought to compose part of the pilus required for transfer. This domain has a similar fold to the NTF2 protein.	2.76734e-48
NZ_AP021893.1\|WP_172408789.1\|1836562_1837357_+\|hypothetical-protein	gnl\|CDD\|226297	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane].	4.02531e-11
NZ_AP021893.1\|WP_172408791.1\|1839852_1840704_-\|protein-deglycase-HchA	gnl\|CDD\|235228	PRK04155, PRK04155, protein deglycase HchA.	0
NZ_AP021893.1\|WP_172408851.1\|1842132_1844022_-\|TraM-recognition-domain-containing-protein	gnl\|CDD\|274760	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily. Members of this protein family are the putative conjugative coupling factor, TraD (or TraG), rather distantly related to the well-characterized TraD of the F plasmid. Members are associated with conjugative-transposon-like mobile genetic elements of the class that includes SXT, an antibiotic resistance transfer element in some Vibrio cholerae strains. [Mobile and extrachromosomal element functions, Other].	1.16887e-08
NZ_AP021893.1\|WP_172408849.1\|1836012_1836327_-\|recombinase	gnl\|CDD\|271188	cd01188, INT_RitA_C_like, C-terminal catalytic domain of recombinase RitA, a component of the recombinase trio. Recombinases RitA (also known as pAE1), RitB, and RitC are encoded by three adjacent and overlapping genes. Collectively they are known as the Recombinase in Trio (RIT). This RitA family includes various bacterial integrases and integrases from the deletion-prone region of plasmid pAE1 of Alcaligenes eutrophus H1. All three integrases contain a catalytic motif, suggesting that they are all active enzymes. However, their specific roles are not fully understood. All three families belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.95122e-05
NZ_AP021893.1\|WP_172408793.1\|1845825_1846845_-\|P-type-DNA-transfer-ATPase-VirB11	gnl\|CDD\|274301	TIGR02788, conjugal_transfer_protein, P-type DNA transfer ATPase VirB11. The VirB11 protein is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer. VirB11 is believed to be an ATPase. VirB11 is a homolog of the P-like conjugation system TrbB protein and the Flp pilus sytem protein TadA.	4.73455e-104
NZ_AP021893.1\|WP_172408785.1\|1830738_1831353_-\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|223241	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism].	2.35829e-93
NZ_AP021893.1\|WP_172408853.1\|1849469_1850372_-\|P-type-conjugative-transfer-protein-VirB9	gnl\|CDD\|274296	TIGR02781, Protein_virB9, P-type conjugative transfer protein VirB9. The VirB9 protein is found in the vir locus of Agrobacterium Ti plasmids where it is involved in a type IV secretion system . VirB9 is a homolog of the F-type conjugative transfer system TraK protein (which is believed to be an outer membrane pore-forming secretin, TIGR02756) as well as the Ti system TrbG protein. [Cellular processes, Conjugation].	1.2477e-74
NZ_AP021893.1\|WP_172408788.1\|1834773_1835718_+\|DUF1738-domain-containing-protein	gnl\|CDD\|226680	COG4227, COG4227, Antirestriction protein [DNA replication, recombination, and repair].	7.84204e-104
NZ_AP021893.1\|WP_172408792.1\|1845083_1845386_-\|kikA-from-plasmid-origin	gnl\|CDD\|369359	pfam07424, TrbM, TrbM. This family contains the bacterial protein TrbM (approximately 180 residues long). In Comamonas testosteroni T-2, TrbM is derived from the IncP1beta plasmid pTSA, which encodes the widespread genes for p-toluenesulfonate (TSA) degradation.	0.00410577
NZ_AP021893.1\|WP_172408852.1\|1845430_1845829_-\|Cag-pathogenicity-island-protein-Cag12	gnl\|CDD\|372486	pfam13117, Cag12, Cag pathogenicity island protein Cag12. This is a Proteobacterial family of Cag pathogenicity island proteins.	3.60048e-25
NZ_AP021893.1\|WP_172408795.1\|1848199_1849450_-\|TrbI/VirB10-family-protein	gnl\|CDD\|319755	cd16429, VirB10, VirB10 forms part of core complex in Type IV secretion system (T4SS). This family contains VirB10, a component of the type IV secretion system (T4SS), including homologs TrbI, TraF, TrwE and TraL. T4S system is employed by pathogenic bacteria to export virulence DNAs and/or proteins directly from the bacterial cytoplasm into the host cell. It forms a large multiprotein complex consisting of 12 proteins termed VirB1-11 and VirD4. VirB10, interacts with VirB7 and VirB9, forming the membrane-spanning 'core complex' (CC), around which all other components assemble. The CC is inserted in both, the outer and inner membranes, playing a fundamental role as a scaffold for the rest of the T4SS components and actively participating in T4S substrate transfer through the bacterial envelope via conformational changes regulating channel opening and closing. TrwE in R33 plasmid has been shown to be anchored to the inner membrane and its C-terminal is necessary for conjugation; the transmembrane domains of TrwB and TrwE are involved in TrwB-TrwE interactions. TraF protein of the RP4 plasmid is involved in circularization of pilin subunits of P-type pili. In gonococcal genetic island (GGI) of Neisseria gonorrhoeae, T4SS encodes TrbI and circularization occurs via a covalent intermediate between the C terminus of putative pilin protein TraA and TrbI.	2.05045e-59
NZ_AP021893.1\|WP_172408790.1\|1837372_1839574_+\|family-16-glycosylhydrolase	gnl\|CDD\|185684	cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16. Lichenase, also known as 1,3-1,4-beta-glucanase, is a member of glycosyl hydrolase family 16, that specifically cleaves 1,4-beta-D-glucosidic bonds in mixed-linked beta glucans that also contain 1,3-beta-D-glucosidic linkages. Natural substrates of beta-glucanase are beta-glucans from grain endosperm cell walls or lichenan from the Islandic moss, Cetraria islandica. This protein is found not only in bacteria but also in anaerobic fungi. This domain includes two seven-stranded antiparallel beta-sheets that are adjacent to one another forming a compact, jellyroll beta-sandwich structure.	5.58344e-38
NZ_AP021893.1\|WP_172408787.1\|1833036_1833918_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182183	PRK09986, PRK09986, LysR family transcriptional regulator.	3.07057e-50

>NZ_AP021893.1|WP_172408851.1|1842132_1844022_-|TraM-recognition-domain-containing-protein
MVLNKLIVSLSPIVDGMLGLLVFMHQHQPILALFSGLTMPFFASMKSDERLKAPLWKKLVIVFSILCFLFGTIAPVVNELFQWIYRIKIATSNTVLSWLILITSTAAGFVFHILLRRVLTPELDKVKSRFVRKTTLERELRTDVRTVKSLLPETLHYNPEDYINLSKGIFIGMNRMKQPMYLPLKDWQKQHADIIGTTGAGKGVATGILLYQSILAGEGVFVMDPKDDEWAPHLYRKACEDAGKSFALIDLRKQAYQLNLINDITADELEELFVAGFSLAEKGQESDFYRIDDRKAARIAAQFVARNTTSTIRDVYNGEYVQSIADKIKAFFGKIEELALLNAINAPAGFSLNTIFDNGGCCYVIGSMRNSKIITAQRMLLVRLYQLAERRDRVNHTPRPIAIYLSELKYHLSKPALEGLGAARDKGVHIIMDHQSIADLKDCPADLKSDAVVGAVVENAKFKLVYRVMDPDTADWVARMSGTILVDDEVRKAKTDAVLTETIDSERTIRQAERFFIDSNMVLNLPDFVSFIFTTKALPSASLISPIRVKKRELAICAVSPAVAATAARVNIALNFDEEEMSSGPSSTSVITTTQPDLFFDKPDEKHTTTSAGAGAGAGKEDHPSLLNF
>NZ_AP021893.1|WP_172408850.1|1841368_1842121_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-MobC
MLITAYRERQTRHREKIIRLLNFLKEETYSDFTTLMLLFGFRDHKSLYSLLSKVEGMGLIQKHVLVSRTKKISLWGITNDGLAVVIQPDDEIFPARFEPSKLTGWTLEHHLDNQMARIILEKKGACGWIHGDRTTFLSRYQVSHRPDGLIALPSGTVIAIETERHLKTKARYQSIIASHLLARTRKDWIYVFYIVPDPQKKLGLERLFDSIQYVIVNHQHIPLETRHRNVFRIYTIDELQRLDIATSMQI
>NZ_AP021893.1|WP_172408791.1|1839852_1840704_-|protein-deglycase-HchA
MTNDKSKHPKVDHAEENAFFPSDYSLSQFTSPVSDLSDYDYPKQCMGGKKVLVIAADERYLMTDSGALFSTGNHPVETLIPMYHLHAAGFDFDIATISGYMTKFEYWAMPHKDEKVMPFFSRYRDKFQNPEKLSDVLNSLNKQSEYAAVFIPGGHGALIGLPESSAVADTLRWFMDNDRFVISLCHGPAAFLSLRNGENPLKEYSICAFPDSADKQTPDIGYMPGHLTWYFGDALKQMGMNIVNDDIKGSVYKDRKVLTGDSPFAANALGQLAAKELLSVYAS
>NZ_AP021893.1|WP_172408790.1|1837372_1839574_+|family-16-glycosylhydrolase
MNIKNNLKGISRFFYSFYLRSRLLLPAQKSSTFNTLNQNEGVISRIYAINLEREAIRWADLNKELGKILDKSNKKLTSQLTRFSAINAKEMSDILNEEEVIPYYTLADQLYVDPQPKILPDKFDLDVPIKMSKAEIAVALSHLNVIRLVAEGSDAYALVLEDDVYFERDFAKTLDAAWSEMIQADRSSPGFDILYLSFKEVMNGAKKKIISKSIFKPERGLWYFSGYVLSKKGANKILSLLPTYGPIDLWINHQFEKLDVRAVYKSIISQRLDFNSSNSYSILPTLVKIGIIDNEKASSFNELPKYWPVFAFGVSGSGISSLGMALSMLGYKCCSDIDRLPNADLKNLLSNSEQNEFNAYVNVGCLSKYIGILKKQYPKAKFIITTSESKEIEDVIFNIIEEIVDTDYVVLHSDEKNKWKVICEYLQCPPPISAYPEMADIIPRQIIDITSAAQINNSEINMIHDISPWILERKNFSGNGFFIKDNPKRIEKELADFFINDSLQNINNNYWEIRDDTFPGNLGLFRPQNVIQNDISGLGLVVKEEQLGVREFSAAAISSRMKFLYGRFEVSLRAANVAGIVTGFFLHRDSPRQEIDIEFVGNRSDHMLINVFYNPGDEGAKFDYGYRGTPTLIPLGFDASEEFHDYMIEWSPDEIKWFVDGVMVYRRGVWGPTPIPHLPMTLHANTWPTRSKELAGRLHTRSLPCITYIRKICIDATMDVNNPKLNDQTVVAG
>NZ_AP021893.1|WP_172408789.1|1836562_1837357_+|hypothetical-protein
MESEETKEESYQQRSEFIRKIIQQPVEGVISSCTIPKKIIQFWDSSNTIPNDVRHCMKSWRILEPFGYEYLLYDFVSAQEFIKHNLGETYSEAFAKCTHPAMQSDYFRLCYISVNGGFYVDTDDVYLGSEISSFFTDDKLKIQPLCYDISTDSMIPPEIFTKENTYEESWIFYFNNNPLIAPPHHVIIDKALEQSTYLLNKSSYPLTDIQSTTGPGNLSKSIFSCREEIDLLSQITVVSNWQDIAETKWDLEYRADSRNWRLMN
>NZ_AP021893.1|WP_172408849.1|1836012_1836327_-|recombinase
MRDNHAQISNITGALSMNTSPWDKDRIVSITDQKDHFRYLISGGIRIRLEMEGKMRDLTLFNMTLDSKLRGYDLIKLKVSDVAYVNSVSSRATVLQQIARSNLK
>NZ_AP021893.1|WP_172408788.1|1834773_1835718_+|DUF1738-domain-containing-protein
MTMSLHTKISAPNTTAATSVSSLDLSGSSKTKCSTARTDIYQTVTDSIIAALETGVKPWVCPWQRAPGMSGLPSNYATGKAYSGMNIMLLWCSASKQGFCDSRWMTYKQAKAVGGQVRKGEHGTTAIFYTTLEKENDNGETDYIPMLKAFTVFNVEQIDGLLLSDDAVFPAEIFEPLPRAEALFRSSGATIIEKGQNAFFTPSTDEIRLPERYLFIDAANFYATGLHELVHWSGAKSRLNREMKGKFGSEGYAFEELIAELGSAFLMADLGIVGEVQHDSYIASWLKALRNDKRYIFKAASAASKAHRYLMDKS
>NZ_AP021893.1|WP_172408787.1|1833036_1833918_+|LysR-family-transcriptional-regulator
MDYRYLHAFVVLARELHFGKAALRLNITQPALSRQIRVLEDQLGMVLFTRDRRHVALTVEGTQLAAEARSAVSHYEKMLSRASSLRKGYKGQLILGYVGSSILDPALTRLITCFRETKPDVEIVIEEHNVDEQLTLLLDHQLDMGLLRSPVPHFANLDYVDIATRSLIAAVPHTHPQAGVGKIELETLSGDTFMIQKDPPGVGLGWSALHACEMASFVPPKIYFTRDVAVAIGMVSMGIGVTLVPETQRSVTLPNVCYCLLHDPEVTTTLTLCWPKFRKSRELIEFVRSLTLG
>NZ_AP021893.1|WP_172408786.1|1831363_1832848_-|UbiD-family-decarboxylase
MSQTQKVTDLRSALAVLRKFDDELIETDEPVDPSAELSGVYRYIGAHGTVMRPTRIGPAMLFNRIKGYTDMRVLIGLLASRKRVARLLDTTPDKLAFLLKDAVSTPISPVVIPQENAVCQEVVHLASDPDFSILNILPAPTNTPEDAGPYFTLGMCYAADPHTGEHDITIHRLCVQNRDEISMYFVPGRHLDLFRQKAEEDGAPLPISISIGVDPAIEIGACFEPPTTPLGFDELSVAGSLRKQPVELCQCLTVNARAIANAEVVIEGELIPNYRVREDQNTNSGKAMPEFPGYTGQAQQMVPVIKVKAITHRRHPILQTCIGPSDEHTNMAGIPTEASILQLVERALPGFVQNVHCPSPGTGKYLAVLQVKKRLPNDEGRQRQAALLAFSAFSELKHVILVDDDVDIFDLNDVIWAMTTRYQGDISTVFIPGVRCHPLDPSSDPAFSYSVRDHGIACKTIFDCTVPFTMKGQFRRSEFMEVEISRFLPDNFKY
>NZ_AP021893.1|WP_172408785.1|1830738_1831353_-|UbiX-family-flavin-prenyltransferase
MSTSECSPRKRVIIGISGASGFLYGVQALRYLRQLNVESHVVISPAAHLTRSLETTLSEDDVHKLADVIYPFDDIAADIASGSFRASGMLIVPCSMNTLAAVAAGLTNSLLVRAADVTLKERRRLVLMVRETPLHTGHLRNMLQVTETGGIIFPPVPAWYARPASTENIFAHSVARALSLLDLDCDTLPRWGETPNLNNRSKSL
>NZ_AP021893.1|WP_044711683.1|1844729_1845035_-|hypothetical-protein
MDKENLFISNIHSMHHDRISVGAVYRKFSEEANQGCGLYYEIYESRLISLLRHHLSRLNEQDADKLRRYAENQGTKVDDETYREVLKAEQECRAEIYREQV
>NZ_AP021893.1|WP_172408792.1|1845083_1845386_-|kikA-from-plasmid-origin
MKYASIATVMLCIAIVLPVYCFASDPCEVVLCMYGKATGNSGGSECHSAEKTFFNIVKKNKHGFLPGHTLNARKAFLGECASADPEAVNKILSRFGRLRG
>NZ_AP021893.1|WP_172408852.1|1845430_1845829_-|Cag-pathogenicity-island-protein-Cag12
MMKTINILLFLMVLTGCSSPPPPVSVEWDKSGESVNINLSQWNDTPVINPSPVVNGKWLLSVHSTQFNETLWTPDVFYAVAHSTRIVVAAPSGTAFFTATSWLRQHGANGVIEYQPATQCLTCSDTYIYFSH
>NZ_AP021893.1|WP_172408793.1|1845825_1846845_-|P-type-DNA-transfer-ATPase-VirB11
MKNISLDRYTQRFFGDFIAHPGLTEIAVNRPGELFTKINGIWELHSVSLDYEGCYNFARCLAKHHCDNIEDIKPGLSATLESGERCQVIVPPACERNTVSITIRKPSQVQIPHQSYIDAGFYNRVTGSETTQTHDQELLSLYTAKDIPRFMEKCVEYGKTIAVAGETGTGKTTYMKMLIGFIPRHLRITTIEDNPEITFFVHKNYVHLFYPSESADEKGSIVTPASLLRWNYRMNPDRILLTEVRGGEAWDFLKITGSGHEGSMTSLHAGSAIEAVDGFITRCYENPQCARLPYTFMLRKVLDSLDVIVSIDLDGNVRRMNDIYFRPLHRNAFFEEMKA
>NZ_AP021893.1|WP_172408794.1|1846882_1847890_+|hypothetical-protein
MSKTKVLFAYCHELGRCLSIDEARMEFFSRKPEERKRFTFSCSDRNCDVTISGVNYHVKAEDGEKFKAAHFRSPHPHKFGCEWLEFTEDADQDRRPDESEADFTERKAKQKLTDYINCFDPSIDDPDGEPSDPVKLVTPVHTRKTVGDDDKMGTNEEPRWSRYTRTNQLQRLIDTWQEAKETLPQDEFRALRLRIMHHDQVYLHEYITHIQRGLANPYSGVIYGGGTLMHRYGRGFLINFFDKHEGKPVRLYVSKDLMAKGRFGHYIDEILDTKNVRYFRIFLLNPVVSERENSTGKSVINLEISKLRQLAIYYELNSSREDESSSVETEGESPA
>NZ_AP021893.1|WP_071941327.1|1847820_1848207_-|hypothetical-protein
MSNRKFLFGVTATDVIVRDDFSNAVVNDLLSHLTGIRRIVMTCYRAGGALIELSIDSGEEQPFCITISEGPLDAPPFSPDDIRLAHKQISLPDVTDILILVTTLARYAGLSPSVSTDEDSSSLLEFSS
>NZ_AP021893.1|WP_172408795.1|1848199_1849450_-|TrbI/VirB10-family-protein
MNDEHLHPVPDESRSCPTQKDDDIAALEREARAKREAVLHTWQDDDNNDPIQPAVNKLKKRQQGKATAFLAFAAVALIALAWGGNWIYHNLLWQPGKEKPQETVAPTDRTDSRQRTDLGTHYIDAKTPEPADNNPGSTTPNGSEALPDLDKARFLVRREGSGSAVRNPVRTRHQEMTQASSARQPSETQYSDTGQPLNTSSPQPEQSPTAVRRIPYNPDLYVPENTAIPCSLDYRFVSDRAGKIRCTIAEDIWSASGNTKLIEKGTTATGMYQTGAETGMTHGQGRAFIIITKLRTRQPPFLDIPLVDTNAAGELGEAGVDGWIDSHFRERFGGALLVGMIPDIGAWASNSAGQKDRNTDYTENSRQAMADMARTTLENSINIPPTLYKNQGEIINLVTGQDIDFSGIYTLRMKSE
>NZ_AP021893.1|WP_172408853.1|1849469_1850372_-|P-type-conjugative-transfer-protein-VirB9
MMKIIILFALAMCGIAWGAAIPQASRYDARLQQVVYNPFNVTVVNTRPGFVTTLIFDNDEAVISAKPGFEDAWEATTDANRVSIRPVALIQGAPGVDGNTAQVVIPPNSHDWHTNMLIVTTRRLYNVELNVIDEKSSQQPAFQVSYRYPDEAHEKSGREVTTKAREREQKQQQADIQQALNAAQTPRNWDYLKYPGSNSTRIVPDFAYDDGRFTFVGFSPAKSIPSLTKELNGQEHVVNSSVRRKGNFTVLVIQEVTPRLVLRSGGAVVGLENRGFGRVQVADGATVSPQVERVVKTATN
>NZ_AP021893.1|WP_172408796.1|1850368_1851052_-|type-IV-secretion-system-protein
MSEQSIIADSRTFEQKMIERDKRATKAGFMVGGAGLLIAILALTTVVLILPLKQTVIELYAVDNHTGRLEHVTRASQTSLTAEEAYQKAMTSSYVRVRERYIYPALQDDYSTVQVYNSPQVNDDYLALYSGKDAPDKVYQNEAHTVHIDILSNQITEGTAPDKVATLRYKKTIRRLADSSTRTEYWDAHLTFHSDPSKEMSDTEREVNPFGFTVTSWQADREIRGVE
>NZ_AP021893.1|WP_172408797.1|1851044_1851182_-|hypothetical-protein
MKRLIALILLCALYGCAQSPHPLAFSGNGIPVNTPQMMAELNNHE

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Crispr_ID: NZ_AP021893_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021893_5

2183475-2183598

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021893_5

>merge|NZ_AP021893|5|2183475-2183598|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_AP021893|5|5|2183475-2183598|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021893.1\|WP_000007283.1\|2194153_2194735_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_AP021893.1\|WP_000212680.1\|2183034_2183340_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_AP021893.1\|WP_001297805.1\|2178324_2178963_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_AP021893.1\|WP_001069987.1\|2179691_2180477_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_AP021893.1\|WP_001174940.1\|2185209_2186583_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_AP021893.1\|WP_000587561.1\|2180480_2181293_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_AP021893.1\|WP_000716937.1\|2181304_2182909_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_AP021893.1\|WP_000534307.1\|2183912_2185169_+\|AIDA-repeat-containing-protein	unknown	unknown	gnl\|CDD\|137602
NZ_AP021893.1\|WP_001273552.1\|2176209_2178312_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_AP021893.1\|WP_000098896.1\|2187478_2188627_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_AP021893.1\|WP_000190982.1\|2191170_2192196_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_AP021893.1\|WP_000493947.1\|2186797_2187439_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_AP021893.1\|WP_001295403.1\|2172928_2174341_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_AP021893.1\|WP_000102278.1\|2192494_2192584_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_AP021893.1\|WP_001182363.1\|2188917_2190129_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_AP021893.1\|WP_000701040.1\|2192749_2193919_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_AP021893.1\|WP_001070230.1\|2175562_2176189_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_AP021893.1\|WP_000528342.1\|2174897_2175107_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_AP021893.1\|WP_000269493.1\|2190241_2191174_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_AP021893.1\|WP_001349911.1\|2179026_2179695_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451

Protein	Function_ID	Function_description	E-value
NZ_AP021893.1\|WP_000007283.1\|2194153_2194735_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_AP021893.1\|WP_000212680.1\|2183034_2183340_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	4.48611e-64
NZ_AP021893.1\|WP_001297805.1\|2178324_2178963_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	1.93584e-120
NZ_AP021893.1\|WP_001069987.1\|2179691_2180477_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.01591e-161
NZ_AP021893.1\|WP_001174940.1\|2185209_2186583_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_AP021893.1\|WP_000587561.1\|2180480_2181293_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	1.59319e-174
NZ_AP021893.1\|WP_000716937.1\|2181304_2182909_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_AP021893.1\|WP_000534307.1\|2183912_2185169_+\|AIDA-repeat-containing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_AP021893.1\|WP_001273552.1\|2176209_2178312_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_AP021893.1\|WP_000098896.1\|2187478_2188627_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_AP021893.1\|WP_000190982.1\|2191170_2192196_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_AP021893.1\|WP_000493947.1\|2186797_2187439_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_AP021893.1\|WP_001295403.1\|2172928_2174341_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_AP021893.1\|WP_001182363.1\|2188917_2190129_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_AP021893.1\|WP_000701040.1\|2192749_2193919_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
NZ_AP021893.1\|WP_001070230.1\|2175562_2176189_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
NZ_AP021893.1\|WP_000528342.1\|2174897_2175107_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_AP021893.1\|WP_000269493.1\|2190241_2191174_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_AP021893.1\|WP_001349911.1\|2179026_2179695_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76

>NZ_AP021893.1|WP_000212680.1|2183034_2183340_-|monooxygenase
MATLLQLHFSFNGPFGDTMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_AP021893.1|WP_000716937.1|2181304_2182909_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFHGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_AP021893.1|WP_000587561.1|2180480_2181293_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALVYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_AP021893.1|WP_001069987.1|2179691_2180477_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPLPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_AP021893.1|WP_001349911.1|2179026_2179695_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_AP021893.1|WP_001297805.1|2178324_2178963_+|YdhW-family-putative-oxidoreductase-system-protein
MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_AP021893.1|WP_001273552.1|2176209_2178312_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRVTTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV
>NZ_AP021893.1|WP_001070230.1|2175562_2176189_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_AP021893.1|WP_000528342.1|2174897_2175107_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_AP021893.1|WP_001295403.1|2172928_2174341_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_AP021893.1|WP_000534307.1|2183912_2185169_+|AIDA-repeat-containing-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGTGWLKVATGGIVKCTQYGNNGTLSVSDGAIATDVVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIRVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_AP021893.1|WP_001174940.1|2185209_2186583_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR
>NZ_AP021893.1|WP_000493947.1|2186797_2187439_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_AP021893.1|WP_000098896.1|2187478_2188627_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_AP021893.1|WP_001182363.1|2188917_2190129_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_AP021893.1|WP_000269493.1|2190241_2191174_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_AP021893.1|WP_000190982.1|2191170_2192196_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_AP021893.1|WP_000102278.1|2192494_2192584_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_AP021893.1|WP_000701040.1|2192749_2193919_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_AP021893.1|WP_000007283.1|2194153_2194735_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_AP021893_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021893_6

2897412-2897503

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021893_6

>merge|NZ_AP021893|6|2897412-2897503|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTCTTGAAATTACCCCCACTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_AP021893|6|6|2897412-2897503|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTCTTGAAATTACCCCCACTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021893.1\|WP_001120125.1\|2907679_2908372_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_AP021893.1\|WP_001230242.1\|2906377_2907550_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_AP021893.1\|WP_000024560.1\|2902778_2903084_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_AP021893.1\|WP_000979516.1\|2886487_2886697_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021893.1\|WP_000420621.1\|2901858_2902779_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_AP021893.1\|WP_000191700.1\|2890753_2891392_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_AP021893.1\|WP_001126772.1\|2893474_2893861_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_AP021893.1\|WP_032222662.1\|2886751_2890714_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_AP021893.1\|WP_001459640.1\|2893868_2894669_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_AP021893.1\|WP_001044279.1\|2898808_2900050_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_AP021893.1\|WP_172408854.1\|2891679_2892771_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_AP021893.1\|WP_001264933.1\|2908344_2909373_-\|TMAO-reductase-system-periplasmic-protein-TorT	unknown	unknown	gnl\|CDD\|236801
NZ_AP021893.1\|WP_001143120.1\|2898543_2898771_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_AP021893.1\|WP_001459639.1\|2895794_2897123_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_AP021893.1\|WP_001151437.1\|2897926_2898523_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_AP021893.1\|WP_001063152.1\|2903831_2906378_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_AP021893.1\|WP_001307708.1\|2892770_2893463_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_AP021893.1\|WP_001028095.1\|2895279_2895774_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_AP021893.1\|WP_000209894.1\|2903235_2903835_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_AP021893.1\|WP_001001185.1\|2894678_2895269_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040

Protein	Function_ID	Function_description	E-value
NZ_AP021893.1\|WP_001120125.1\|2907679_2908372_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	1.16516e-137
NZ_AP021893.1\|WP_001230242.1\|2906377_2907550_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_AP021893.1\|WP_000024560.1\|2902778_2903084_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	5.75956e-65
NZ_AP021893.1\|WP_000420621.1\|2901858_2902779_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_AP021893.1\|WP_000191700.1\|2890753_2891392_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.12845e-153
NZ_AP021893.1\|WP_001126772.1\|2893474_2893861_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	1.36916e-84
NZ_AP021893.1\|WP_032222662.1\|2886751_2890714_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_AP021893.1\|WP_001459640.1\|2893868_2894669_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	2.13644e-140
NZ_AP021893.1\|WP_001044279.1\|2898808_2900050_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_AP021893.1\|WP_172408854.1\|2891679_2892771_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_AP021893.1\|WP_001264933.1\|2908344_2909373_-\|TMAO-reductase-system-periplasmic-protein-TorT	gnl\|CDD\|236801	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional.	1.32852e-176
NZ_AP021893.1\|WP_000209894.1\|2903235_2903835_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	1.00485e-84
NZ_AP021893.1\|WP_001459639.1\|2895794_2897123_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_AP021893.1\|WP_001307708.1\|2892770_2893463_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	5.84226e-169
NZ_AP021893.1\|WP_001063152.1\|2903831_2906378_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_AP021893.1\|WP_001143120.1\|2898543_2898771_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_AP021893.1\|WP_001028095.1\|2895279_2895774_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	3.76111e-106
NZ_AP021893.1\|WP_001151437.1\|2897926_2898523_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_AP021893.1\|WP_001001185.1\|2894678_2895269_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	4.81999e-128

>NZ_AP021893.1|WP_001459639.1|2895794_2897123_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAIMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGMNPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDYTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP
>NZ_AP021893.1|WP_001028095.1|2895279_2895774_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_AP021893.1|WP_001001185.1|2894678_2895269_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFNRQYVDDAFFAGSTLKSNLLINIGYGDNSKLYARLPRLSFEEACGLL
>NZ_AP021893.1|WP_001459640.1|2893868_2894669_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPMQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_AP021893.1|WP_001126772.1|2893474_2893861_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNMLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_AP021893.1|WP_001307708.1|2892770_2893463_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFARIA
>NZ_AP021893.1|WP_172408854.1|2891679_2892771_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAVRMKQAAEQTGRDVGSYVLFMVIADETDNAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_AP021893.1|WP_000191700.1|2890753_2891392_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEIFFNQTVENVQRIIIEGIRPR
>NZ_AP021893.1|WP_032222662.1|2886751_2890714_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLVDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLVVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_AP021893.1|WP_000979516.1|2886487_2886697_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_AP021893.1|WP_001151437.1|2897926_2898523_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_AP021893.1|WP_001143120.1|2898543_2898771_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_AP021893.1|WP_001044279.1|2898808_2900050_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDADGFCPMDKFDSVLNEAVK
>NZ_AP021893.1|WP_000420621.1|2901858_2902779_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_AP021893.1|WP_000024560.1|2902778_2903084_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_AP021893.1|WP_000209894.1|2903235_2903835_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNELENRIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVARCRQYDSFGFYAALSQLLLVLVECDHQNR
>NZ_AP021893.1|WP_001063152.1|2903831_2906378_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAVKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPQLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKHIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQTYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_AP021893.1|WP_001230242.1|2906377_2907550_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_AP021893.1|WP_001120125.1|2907679_2908372_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
>NZ_AP021893.1|WP_001264933.1|2908344_2909373_-|TMAO-reductase-system-periplasmic-protein-TorT
MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVASLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK

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Crispr_ID: NZ_AP021893_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021893_7

3194742-3194886

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021893_7

>merge|NZ_AP021893|7|3194742-3194886|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>NZ_AP021893|7|7|3194742-3194886|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021893.1\|WP_001340186.1\|3182640_3183630_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_AP021893.1\|WP_001091569.1\|3193392_3194676_+\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_AP021893.1\|WP_000246761.1\|3188396_3189152_-\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_AP021893.1\|WP_000113003.1\|3204811_3205585_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_AP021893.1\|WP_000891669.1\|3203061_3204120_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_AP021893.1\|WP_000042533.1\|3185126_3187148_-\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_AP021893.1\|WP_023281131.1\|3191416_3192706_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_AP021893.1\|WP_000593906.1\|3194909_3197171_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
NZ_AP021893.1\|WP_000767389.1\|3192764_3193241_+\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_AP021893.1\|WP_000815435.1\|3201092_3202088_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
NZ_AP021893.1\|WP_000951213.1\|3190289_3191330_-\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_AP021893.1\|WP_032216032.1\|3187726_3188404_-\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_AP021893.1\|WP_001295302.1\|3184026_3184935_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	unknown	unknown	gnl\|CDD\|211689
NZ_AP021893.1\|WP_001300666.1\|3202242_3203061_+\|bifunctional-pyridoxal-phosphate/fructose-1,6-bisphosphate-phosphatase	unknown	unknown	gnl\|CDD\|182523
NZ_AP021893.1\|WP_000891515.1\|3205750_3205900_-\|multidrug-efflux-pump-accessory-protein-AcrZ	unknown	unknown	gnl\|CDD\|371231
NZ_AP021893.1\|WP_000604034.1\|3204122_3204812_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_AP021893.1\|WP_000723652.1\|3198862_3199915_-\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
NZ_AP021893.1\|WP_000679972.1\|3200098_3201052_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
NZ_AP021893.1\|WP_001036475.1\|3197353_3198787_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_AP021893.1\|WP_000118797.1\|3189138_3190293_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655

Protein	Function_ID	Function_description	E-value
NZ_AP021893.1\|WP_001340186.1\|3182640_3183630_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
NZ_AP021893.1\|WP_001091569.1\|3193392_3194676_+\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_AP021893.1\|WP_000246761.1\|3188396_3189152_-\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	7.9121e-172
NZ_AP021893.1\|WP_000113003.1\|3204811_3205585_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
NZ_AP021893.1\|WP_000891669.1\|3203061_3204120_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_AP021893.1\|WP_000042533.1\|3185126_3187148_-\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_AP021893.1\|WP_023281131.1\|3191416_3192706_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_AP021893.1\|WP_000593906.1\|3194909_3197171_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
NZ_AP021893.1\|WP_000767389.1\|3192764_3193241_+\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.08182e-118
NZ_AP021893.1\|WP_000815435.1\|3201092_3202088_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
NZ_AP021893.1\|WP_000951213.1\|3190289_3191330_-\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_AP021893.1\|WP_032216032.1\|3187726_3188404_-\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	9.22115e-109
NZ_AP021893.1\|WP_001295302.1\|3184026_3184935_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	2.22556e-139
NZ_AP021893.1\|WP_001300666.1\|3202242_3203061_+\|bifunctional-pyridoxal-phosphate/fructose-1,6-bisphosphate-phosphatase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
NZ_AP021893.1\|WP_000891515.1\|3205750_3205900_-\|multidrug-efflux-pump-accessory-protein-AcrZ	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	1.04381e-17
NZ_AP021893.1\|WP_000604034.1\|3204122_3204812_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
NZ_AP021893.1\|WP_000723652.1\|3198862_3199915_-\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
NZ_AP021893.1\|WP_000679972.1\|3200098_3201052_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
NZ_AP021893.1\|WP_001036475.1\|3197353_3198787_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
NZ_AP021893.1\|WP_000118797.1\|3189138_3190293_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0

>NZ_AP021893.1|WP_001091569.1|3193392_3194676_+|putative-acyl-CoA-thioester-hydrolase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>NZ_AP021893.1|WP_000767389.1|3192764_3193241_+|kinase-inhibitor
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
>NZ_AP021893.1|WP_023281131.1|3191416_3192706_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTTDDLAFDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANTSLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
>NZ_AP021893.1|WP_000951213.1|3190289_3191330_-|biotin-synthase-BioB
MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL
>NZ_AP021893.1|WP_000118797.1|3189138_3190293_-|8-amino-7-oxononanoate-synthase
MSWQDKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWKQSAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG
>NZ_AP021893.1|WP_000246761.1|3188396_3189152_-|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
>NZ_AP021893.1|WP_032216032.1|3187726_3188404_-|ATP-dependent-dethiobiotin-synthetase-BioD
MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLSVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL
>NZ_AP021893.1|WP_000042533.1|3185126_3187148_-|excinuclease-ABC-subunit-B
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_AP021893.1|WP_001295302.1|3184026_3184935_+|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
>NZ_AP021893.1|WP_001340186.1|3182640_3183630_-|GTP-3',8-cyclase-MoaA
MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVASWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG
>NZ_AP021893.1|WP_000593906.1|3194909_3197171_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>NZ_AP021893.1|WP_001036475.1|3197353_3198787_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>NZ_AP021893.1|WP_000723652.1|3198862_3199915_-|4-oxalomesaconate-tautomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>NZ_AP021893.1|WP_000679972.1|3200098_3201052_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>NZ_AP021893.1|WP_000815435.1|3201092_3202088_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>NZ_AP021893.1|WP_001300666.1|3202242_3203061_+|bifunctional-pyridoxal-phosphate/fructose-1,6-bisphosphate-phosphatase
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>NZ_AP021893.1|WP_000891669.1|3203061_3204120_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKDICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>NZ_AP021893.1|WP_000604034.1|3204122_3204812_-|molybdate-ABC-transporter-permease-subunit
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>NZ_AP021893.1|WP_000113003.1|3204811_3205585_-|molybdate-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQTLLGNSLVVVAPKASEQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK
>NZ_AP021893.1|WP_000891515.1|3205750_3205900_-|multidrug-efflux-pump-accessory-protein-AcrZ
MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH

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Crispr_ID: NZ_AP021893_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021893_8

3430806-3430902

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021893_8

>merge|NZ_AP021893|8|3430806-3430902|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>NZ_AP021893|8|8|3430806-3430902|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021893.1\|WP_000706344.1\|3439234_3440380_-\|glycerate-3-kinase	unknown	unknown	gnl\|CDD\|182152
NZ_AP021893.1\|WP_000540947.1\|3438221_3439007_+\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|200251
NZ_AP021893.1\|WP_000212253.1\|3428327_3429050_+\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_AP021893.1\|WP_000495365.1\|3432651_3433911_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_AP021893.1\|WP_000006900.1\|3441759_3443121_-\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|169193
NZ_AP021893.1\|WP_000855384.1\|3430935_3431829_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
NZ_AP021893.1\|WP_001295318.1\|3429167_3429677_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_AP021893.1\|WP_000912345.1\|3426271_3427657_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_AP021893.1\|WP_152922177.1\|3424526_3425393_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_AP021893.1\|WP_001302767.1\|3440401_3441703_-\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
NZ_AP021893.1\|WP_032216013.1\|3431825_3432641_-\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_AP021893.1\|WP_000815566.1\|3429673_3430741_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_AP021893.1\|WP_000988364.1\|3422601_3423294_-\|type-1-fimbria-chaperone-FimC	unknown	unknown	gnl\|CDD\|185117
NZ_AP021893.1\|WP_000703889.1\|3435904_3436954_+\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
NZ_AP021893.1\|WP_001143558.1\|3425714_3426236_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_AP021893.1\|WP_032202640.1\|3436975_3438211_+\|allantoate-deiminase	unknown	unknown	gnl\|CDD\|274471
NZ_AP021893.1\|WP_000190288.1\|3425394_3425607_+\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
NZ_AP021893.1\|WP_032202639.1\|3433920_3435588_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_AP021893.1\|WP_000776555.1\|3423513_3424056_-\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
NZ_AP021893.1\|WP_000255997.1\|3427830_3428325_+\|peptidylprolyl-isomerase-B	unknown	unknown	gnl\|CDD\|182734

Protein	Function_ID	Function_description	E-value
NZ_AP021893.1\|WP_000706344.1\|3439234_3440380_-\|glycerate-3-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
NZ_AP021893.1\|WP_000540947.1\|3438221_3439007_+\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	3.35803e-151
NZ_AP021893.1\|WP_000212253.1\|3428327_3429050_+\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.25513e-165
NZ_AP021893.1\|WP_000495365.1\|3432651_3433911_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8369e-131
NZ_AP021893.1\|WP_000006900.1\|3441759_3443121_-\|allantoinase-AllB	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
NZ_AP021893.1\|WP_000855384.1\|3430935_3431829_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
NZ_AP021893.1\|WP_001295318.1\|3429167_3429677_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
NZ_AP021893.1\|WP_000912345.1\|3426271_3427657_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_AP021893.1\|WP_152922177.1\|3424526_3425393_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_AP021893.1\|WP_001302767.1\|3440401_3441703_-\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
NZ_AP021893.1\|WP_032216013.1\|3431825_3432641_-\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	1.48896e-37
NZ_AP021893.1\|WP_000815566.1\|3429673_3430741_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	5.70382e-179
NZ_AP021893.1\|WP_000988364.1\|3422601_3423294_-\|type-1-fimbria-chaperone-FimC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.4332e-149
NZ_AP021893.1\|WP_000703889.1\|3435904_3436954_+\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
NZ_AP021893.1\|WP_001143558.1\|3425714_3426236_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.17059e-30
NZ_AP021893.1\|WP_032202640.1\|3436975_3438211_+\|allantoate-deiminase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_AP021893.1\|WP_000190288.1\|3425394_3425607_+\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
NZ_AP021893.1\|WP_032202639.1\|3433920_3435588_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
NZ_AP021893.1\|WP_000776555.1\|3423513_3424056_-\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
NZ_AP021893.1\|WP_000255997.1\|3427830_3428325_+\|peptidylprolyl-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121

>NZ_AP021893.1|WP_000815566.1|3429673_3430741_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>NZ_AP021893.1|WP_001295318.1|3429167_3429677_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>NZ_AP021893.1|WP_000212253.1|3428327_3429050_+|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>NZ_AP021893.1|WP_000255997.1|3427830_3428325_+|peptidylprolyl-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>NZ_AP021893.1|WP_000912345.1|3426271_3427657_-|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>NZ_AP021893.1|WP_001143558.1|3425714_3426236_+|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFNFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLLMGMLWWRRR
>NZ_AP021893.1|WP_000190288.1|3425394_3425607_+|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>NZ_AP021893.1|WP_152922177.1|3424526_3425393_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNTDNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>NZ_AP021893.1|WP_000776555.1|3423513_3424056_-|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>NZ_AP021893.1|WP_000988364.1|3422601_3423294_-|type-1-fimbria-chaperone-FimC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN
>NZ_AP021893.1|WP_000855384.1|3430935_3431829_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSGGKPAWIGALSRIEETLAGEAGTCISL
>NZ_AP021893.1|WP_032216013.1|3431825_3432641_-|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAEVRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>NZ_AP021893.1|WP_000495365.1|3432651_3433911_-|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>NZ_AP021893.1|WP_032202639.1|3433920_3435588_-|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATSNDICVTIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDASLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPTLRNQLITDLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATVEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>NZ_AP021893.1|WP_000703889.1|3435904_3436954_+|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQKGVAVVGISRMGHSGAISYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEVLTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHVVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>NZ_AP021893.1|WP_032202640.1|3436975_3438211_+|allantoate-deiminase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLSGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTLEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSFEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAILRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKDLVATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLAIMLYQLAWQK
>NZ_AP021893.1|WP_000540947.1|3438221_3439007_+|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNSWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>NZ_AP021893.1|WP_000706344.1|3439234_3440380_-|glycerate-3-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDAHYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGETVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>NZ_AP021893.1|WP_001302767.1|3440401_3441703_-|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>NZ_AP021893.1|WP_000006900.1|3441759_3443121_-|allantoinase-AllB
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP021893_2	2.8\|1025209\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025209-1025240	32	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	74762-74793	0	1.0
NZ_AP021893_2	2.14\|1025575\|32\|NZ_AP021893\|CRISPRCasFinder,CRT	1025575-1025606	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	1	0.969
NZ_AP021893_6	6.1\|2897438\|40\|NZ_AP021893\|CRISPRCasFinder	2897438-2897477	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	1	0.975
NZ_AP021893_5	5.1\|2183518\|38\|NZ_AP021893\|CRISPRCasFinder	2183518-2183555	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_AP021893_1	1.12\|1003052\|32\|NZ_AP021893\|CRT	1003052-1003083	32	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3605	3	0.906
NZ_AP021893_1	1.12\|1003052\|32\|NZ_AP021893\|CRT	1003052-1003083	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3598	3	0.906
NZ_AP021893_1	1.12\|1003052\|32\|NZ_AP021893\|CRT	1003052-1003083	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21074	3	0.906
NZ_AP021893_1	1.4\|1003051\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1003051-1003083	33	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3606	4	0.879
NZ_AP021893_1	1.4\|1003051\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1003051-1003083	33	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3599	4	0.879
NZ_AP021893_1	1.4\|1003051\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1003051-1003083	33	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21075	4	0.879
NZ_AP021893_1	1.12\|1003052\|32\|NZ_AP021893\|CRT	1003052-1003083	32	KY653119	Morganella phage IME1369_02, complete genome	18217-18248	5	0.844
NZ_AP021893_2	2.8\|1025209\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025209-1025240	32	NC_014108	Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence	6021-6052	5	0.844
NZ_AP021893_2	2.8\|1025209\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025209-1025240	32	NZ_CP030922	Escherichia coli strain KL53 plasmid pKL53-S, complete sequence	5379-5410	5	0.844
NZ_AP021893_2	2.8\|1025209\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025209-1025240	32	NZ_CP038659	Citrobacter freundii strain 680 plasmid p680_1, complete sequence	372822-372853	5	0.844
NZ_AP021893_2	2.8\|1025209\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025209-1025240	32	MN699848	Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence	37054-37085	5	0.844
NZ_AP021893_1	1.4\|1003051\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1003051-1003083	33	KY653119	Morganella phage IME1369_02, complete genome	18216-18248	6	0.818
NZ_AP021893_2	2.4\|1024965\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1024965-1024996	32	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	43472-43503	6	0.812
NZ_AP021893_1	1.13\|1003113\|32\|NZ_AP021893\|CRT	1003113-1003144	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755173-755204	7	0.781
NZ_AP021893_2	2.14\|1025575\|32\|NZ_AP021893\|CRISPRCasFinder,CRT	1025575-1025606	32	MK455769	Aeromonas phage MJG, complete genome	10369-10400	7	0.781
NZ_AP021893_1	1.5\|1003112\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1003112-1003144	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
NZ_AP021893_1	1.13\|1003113\|32\|NZ_AP021893\|CRT	1003113-1003144	32	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191951	8	0.75
NZ_AP021893_1	1.16\|1003296\|32\|NZ_AP021893\|CRT	1003296-1003327	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
NZ_AP021893_2	2.3\|1024904\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1024904-1024935	32	NC_018454	Cronobacter phage phiES15, complete genome	8781-8812	8	0.75
NZ_AP021893_2	2.3\|1024904\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1024904-1024935	32	JQ780327	Cronobacter phage phiES15, complete sequence	8781-8812	8	0.75
NZ_AP021893_2	2.12\|1025453\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025453-1025484	32	NZ_CP013415	Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence	218852-218883	8	0.75
NZ_AP021893_1	1.11\|1002991\|32\|NZ_AP021893\|CRT	1002991-1003022	32	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	246573-246604	9	0.719
NZ_AP021893_2	2.5\|1025026\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025026-1025057	32	NZ_CP009595	Bacillus cereus strain 3a plasmid pBFC_3, complete sequence	298003-298034	9	0.719
NZ_AP021893_2	2.5\|1025026\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025026-1025057	32	NZ_CP009606	Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence	164238-164269	9	0.719
NZ_AP021893_2	2.5\|1025026\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025026-1025057	32	NZ_CP053994	Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence	238009-238040	9	0.719
NZ_AP021893_2	2.5\|1025026\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025026-1025057	32	NZ_CP053992	Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence	221025-221056	9	0.719
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	57083-57114	9	0.719
NZ_AP021893_2	2.8\|1025209\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025209-1025240	32	NZ_CP045296	Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence	238917-238948	9	0.719
NZ_AP021893_2	2.10\|1025331\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025331-1025362	32	AP014022	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, * SEQUENCING IN PROGRESS *	22698-22729	9	0.719
NZ_AP021893_2	2.10\|1025331\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025331-1025362	32	AP014023	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, * SEQUENCING IN PROGRESS *	23700-23731	9	0.719
NZ_AP021893_2	2.12\|1025453\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025453-1025484	32	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	208455-208486	9	0.719
NZ_AP021893_2	2.14\|1025575\|32\|NZ_AP021893\|CRISPRCasFinder,CRT	1025575-1025606	32	NC_047954	Pseudomonas phage Njord, complete genome	11435-11466	9	0.719
NZ_AP021893_1	1.9\|1002869\|32\|NZ_AP021893\|CRT	1002869-1002900	32	MN694016	Marine virus AFVG_250M811, complete genome	5413-5444	10	0.688
NZ_AP021893_1	1.9\|1002869\|32\|NZ_AP021893\|CRT	1002869-1002900	32	MN694190	Marine virus AFVG_250M608, complete genome	5350-5381	10	0.688
NZ_AP021893_1	1.9\|1002869\|32\|NZ_AP021893\|CRT	1002869-1002900	32	MN693920	Marine virus AFVG_250M810, complete genome	5422-5453	10	0.688
NZ_AP021893_1	1.9\|1002869\|32\|NZ_AP021893\|CRT	1002869-1002900	32	MN693800	Marine virus AFVG_250M813, complete genome	5404-5435	10	0.688
NZ_AP021893_1	1.9\|1002869\|32\|NZ_AP021893\|CRT	1002869-1002900	32	MN694355	Marine virus AFVG_250M627, complete genome	26040-26071	10	0.688
NZ_AP021893_1	1.9\|1002869\|32\|NZ_AP021893\|CRT	1002869-1002900	32	MN694554	Marine virus AFVG_250M812, complete genome	5416-5447	10	0.688
NZ_AP021893_1	1.9\|1002869\|32\|NZ_AP021893\|CRT	1002869-1002900	32	MN694404	Marine virus AFVG_250M623, complete genome	5369-5400	10	0.688
NZ_AP021893_1	1.12\|1003052\|32\|NZ_AP021893\|CRT	1003052-1003083	32	MF158039	Shigella phage Sf12, complete genome	4975-5006	10	0.688
NZ_AP021893_1	1.12\|1003052\|32\|NZ_AP021893\|CRT	1003052-1003083	32	MF158042	Shigella phage Sd1, complete genome	938-969	10	0.688
NZ_AP021893_2	2.2\|1024843\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1024843-1024874	32	NZ_CP027239	Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence	55281-55312	10	0.688
NZ_AP021893_2	2.4\|1024965\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1024965-1024996	32	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	50199-50230	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	19612-19643	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	115804-115835	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	116173-116204	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	182725-182756	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	110105-110136	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	109122-109153	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	221496-221527	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	207469-207500	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	199664-199695	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	13581-13612	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	73431-73462	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	187798-187829	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	106322-106353	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	148086-148117	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	93116-93147	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	185318-185349	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	219648-219679	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	158306-158337	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	93116-93147	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	167798-167829	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NC_002305	Salmonella typhi plasmid R27, complete sequence	128806-128837	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	91681-91712	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	183046-183077	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	182844-182875	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	37794-37825	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	36345-36376	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	124973-125004	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	184389-184420	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	94449-94480	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	26677-26708	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	182833-182864	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	183156-183187	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	183101-183132	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	197454-197485	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	205427-205458	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	191663-191694	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	49708-49739	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	182844-182875	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	126184-126215	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	93117-93148	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	181554-181585	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	182609-182640	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	182936-182967	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	182844-182875	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	182670-182701	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	183046-183077	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	182572-182603	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	180358-180389	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	176026-176057	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	130052-130083	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	182677-182708	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	182461-182492	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	41577-41608	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	203153-203184	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	109234-109265	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	20553-20584	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	58755-58786	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	179219-179250	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	194749-194780	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	146284-146315	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	176467-176498	10	0.688
NZ_AP021893_2	2.6\|1025087\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025087-1025118	32	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	45801-45832	10	0.688
NZ_AP021893_2	2.8\|1025209\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025209-1025240	32	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	259269-259300	10	0.688
NZ_AP021893_2	2.12\|1025453\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025453-1025484	32	NZ_CP041349	Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence	27173-27204	10	0.688
NZ_AP021893_2	2.12\|1025453\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025453-1025484	32	NZ_CP041350	Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence	149091-149122	10	0.688
NZ_AP021893_2	2.12\|1025453\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025453-1025484	32	NZ_CP004365	Komagataeibacter xylinus E25 plasmid pGX5, complete sequence	172655-172686	10	0.688
NZ_AP021893_2	2.14\|1025575\|32\|NZ_AP021893\|CRISPRCasFinder,CRT	1025575-1025606	32	NC_047894	Pseudomonas phage uligo, complete genome	11353-11384	10	0.688
NZ_AP021893_1	1.1\|1002868\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1002868-1002900	33	MN694016	Marine virus AFVG_250M811, complete genome	5413-5445	11	0.667
NZ_AP021893_1	1.1\|1002868\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1002868-1002900	33	MN694190	Marine virus AFVG_250M608, complete genome	5350-5382	11	0.667
NZ_AP021893_1	1.1\|1002868\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1002868-1002900	33	MN693920	Marine virus AFVG_250M810, complete genome	5422-5454	11	0.667
NZ_AP021893_1	1.1\|1002868\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1002868-1002900	33	MN693800	Marine virus AFVG_250M813, complete genome	5404-5436	11	0.667
NZ_AP021893_1	1.1\|1002868\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1002868-1002900	33	MN694554	Marine virus AFVG_250M812, complete genome	5416-5448	11	0.667
NZ_AP021893_1	1.1\|1002868\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1002868-1002900	33	MN694404	Marine virus AFVG_250M623, complete genome	5369-5401	11	0.667
NZ_AP021893_1	1.1\|1002868\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1002868-1002900	33	MN694355	Marine virus AFVG_250M627, complete genome	26039-26071	11	0.667
NZ_AP021893_1	1.4\|1003051\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1003051-1003083	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
NZ_AP021893_1	1.4\|1003051\|33\|NZ_AP021893\|PILER-CR,CRISPRCasFinder	1003051-1003083	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
NZ_AP021893_1	1.9\|1002869\|32\|NZ_AP021893\|CRT	1002869-1002900	32	MN694191	Marine virus AFVG_250M444, complete genome	10652-10683	11	0.656
NZ_AP021893_1	1.9\|1002869\|32\|NZ_AP021893\|CRT	1002869-1002900	32	MN694065	Marine virus AFVG_250M443, complete genome	44541-44572	11	0.656
NZ_AP021893_2	2.7\|1025148\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025148-1025179	32	MT344105	Acinetobacter phage fLi-Aba03, complete genome	32699-32730	11	0.656
NZ_AP021893_2	2.7\|1025148\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025148-1025179	32	MT344104	Acinetobacter phage fLi-Aba02, complete genome	32861-32892	11	0.656
NZ_AP021893_2	2.7\|1025148\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025148-1025179	32	MT344103	Acinetobacter phage fEg-Aba01, complete genome	31614-31645	11	0.656
NZ_AP021893_2	2.9\|1025270\|32\|NZ_AP021893\|PILER-CR,CRISPRCasFinder,CRT	1025270-1025301	32	MN694507	Marine virus AFVG_250M1178, complete genome	3229-3260	11	0.656

1. spacer 2.8|1025209|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggggaaaacgaacaatctgttt	Protospacer
********************************

2. spacer 2.14|1025575|32|NZ_AP021893|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

3. spacer 6.1|2897438|40|NZ_AP021893|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcattcttgaaattacccccactgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
******************************.*********

4. spacer 5.1|2183518|38|NZ_AP021893|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

5. spacer 1.12|1003052|32|NZ_AP021893|CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

6. spacer 1.12|1003052|32|NZ_AP021893|CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

7. spacer 1.12|1003052|32|NZ_AP021893|CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

8. spacer 1.4|1003051|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

9. spacer 1.4|1003051|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

10. spacer 1.4|1003051|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

11. spacer 1.12|1003052|32|NZ_AP021893|CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggttgtgcggcgttaacgctgaccagcatttc	Protospacer
*  * ******.******** ***********

12. spacer 2.8|1025209|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NC_014108 (Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

13. spacer 2.8|1025209|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030922 (Escherichia coli strain KL53 plasmid pKL53-S, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

14. spacer 2.8|1025209|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

15. spacer 2.8|1025209|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to MN699848 (Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

16. spacer 1.4|1003051|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

17. spacer 2.4|1024965|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgagtccgtcagcggtgcgccgctg-caaca	CRISPR spacer
gtcgagtaagtcagcggtgcgccgcgatcaac-	Protospacer
* *****  **************** . ****

18. spacer 1.13|1003113|32|NZ_AP021893|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
ccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
 *******.**************** *.. *.

19. spacer 2.14|1025575|32|NZ_AP021893|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   *

20. spacer 1.5|1003112|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

21. spacer 1.13|1003113|32|NZ_AP021893|CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
atgcggtcatggatgctgatgttgcagtgatg	Protospacer
*.*.********.***** ******** * ..

22. spacer 1.16|1003296|32|NZ_AP021893|CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **

23. spacer 2.3|1024904|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

24. spacer 2.3|1024904|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

25. spacer 2.12|1025453|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
aatctacaggccgtgacggttgtcatggaggc	Protospacer
     *****************.*** *** *

26. spacer 1.11|1002991|32|NZ_AP021893|CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaaaaccgggcaatcgcaaaaaggcgtaat	CRISPR spacer
gaaaaaaccgcccaatcgcaaaaagatgacga	Protospacer
* ********  *************..*  .

27. spacer 2.5|1025026|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

28. spacer 2.5|1025026|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

29. spacer 2.5|1025026|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

30. spacer 2.5|1025026|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

31. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatatcacccagcactccggg	Protospacer
  *  ******************** ** .

32. spacer 2.8|1025209|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tctgctgcatgggggaaacgatcaatctgttg	Protospacer
**    ..******.****** *********

33. spacer 2.10|1025331|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to AP014022 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccagccgaaacaacgccagcaaaatcgaccgc	CRISPR spacer
ccagccaaaacatcgccagcaaaaccttggag	Protospacer
******.***** ***********.*    .

34. spacer 2.10|1025331|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to AP014023 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccagccgaaacaacgccagcaaaatcgaccgc	CRISPR spacer
ccagccaaaacatcgccagcaaaaccctggag	Protospacer
******.***** ***********.*    .

35. spacer 2.12|1025453|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 9, identity: 0.719

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gctgcacagggtgtgacggttgccattgccga	Protospacer
 * * ***** .****************

36. spacer 2.14|1025575|32|NZ_AP021893|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.

37. spacer 1.9|1002869|32|NZ_AP021893|CRT matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

38. spacer 1.9|1002869|32|NZ_AP021893|CRT matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatacct	Protospacer
.  .*********.***********.**.

39. spacer 1.9|1002869|32|NZ_AP021893|CRT matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

40. spacer 1.9|1002869|32|NZ_AP021893|CRT matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

41. spacer 1.9|1002869|32|NZ_AP021893|CRT matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

42. spacer 1.9|1002869|32|NZ_AP021893|CRT matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

43. spacer 1.9|1002869|32|NZ_AP021893|CRT matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatacct	Protospacer
.  .*********.***********.**.

44. spacer 1.12|1003052|32|NZ_AP021893|CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctccccaagtgccg	Protospacer
 *******.************ ***.   ..

45. spacer 1.12|1003052|32|NZ_AP021893|CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctctccaagtgccg	Protospacer
 *******.************ ***.   ..

46. spacer 2.2|1024843|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcacggaattgttatgctgttcccctgaccg	CRISPR spacer
tcttcggaattgccatgctgttccccttccat	Protospacer
  . ********..*************  *

47. spacer 2.4|1024965|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcgagtccgtcagcggtgcgccgctgcaaca	CRISPR spacer
ttggagtccgacatcggtgcgccgcttttcga	Protospacer
   ******* ** ************ .   *

48. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

49. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

50. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

51. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

52. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

53. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

54. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

55. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

56. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

57. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

58. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

59. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

60. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

61. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

62. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

63. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

64. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

65. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

66. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

67. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

68. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

69. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

70. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

71. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

72. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

73. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

74. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

75. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

76. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

77. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

78. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

79. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

80. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

81. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

82. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

83. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

84. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

85. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

86. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

87. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

88. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

89. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

90. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

91. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

92. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

93. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

94. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

95. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

96. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

97. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

98. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

99. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

100. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

101. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

102. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

103. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

104. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

105. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

106. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

107. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

108. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

109. spacer 2.6|1025087|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

110. spacer 2.8|1025209|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
agctgaatatggggaaaatgcacaatatcccc	Protospacer
   ***************.* ***** * ...

111. spacer 2.12|1025453|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gacggacaggccgccacggttgccatcaggaa	Protospacer
   **********. ***********...*

112. spacer 2.12|1025453|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

113. spacer 2.12|1025453|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

114. spacer 2.14|1025575|32|NZ_AP021893|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .

115. spacer 1.1|1002868|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

116. spacer 1.1|1002868|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.

117. spacer 1.1|1002868|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

118. spacer 1.1|1002868|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

119. spacer 1.1|1002868|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

120. spacer 1.1|1002868|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.

121. spacer 1.1|1002868|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

122. spacer 1.4|1003051|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

123. spacer 1.4|1003051|33|NZ_AP021893|PILER-CR,CRISPRCasFinder matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

124. spacer 1.9|1002869|32|NZ_AP021893|CRT matches to MN694191 (Marine virus AFVG_250M444, complete genome) position: , mismatch: 11, identity: 0.656

cggcccataatattaatataatccacatgagg	CRISPR spacer
gttaatgtaatattattataatcaacatgacc	Protospacer
     ..******** ******* ******

125. spacer 1.9|1002869|32|NZ_AP021893|CRT matches to MN694065 (Marine virus AFVG_250M443, complete genome) position: , mismatch: 11, identity: 0.656

cggcccataatattaatataatccacatgagg	CRISPR spacer
gttaatgtaatattattataatcaacatgacc	Protospacer
     ..******** ******* ******

126. spacer 2.7|1025148|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to MT344105 (Acinetobacter phage fLi-Aba03, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

127. spacer 2.7|1025148|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to MT344104 (Acinetobacter phage fLi-Aba02, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

128. spacer 2.7|1025148|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to MT344103 (Acinetobacter phage fEg-Aba01, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

129. spacer 2.9|1025270|32|NZ_AP021893|PILER-CR,CRISPRCasFinder,CRT matches to MN694507 (Marine virus AFVG_250M1178, complete genome) position: , mismatch: 11, identity: 0.656

aaccttgtcgggtcgcccgtgcgtcatgatga	CRISPR spacer
tggtatgtcgggtagcccgtgcgccatgcccg	Protospacer
 . . ******** *********.**** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1032999 : 1046182

Escherichia_phage(40.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295182.1\|1032999_1033761_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_000254708.1\|1033754_1034381_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001272590.1\|1034520_1035660_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000081550.1\|1035722_1036715_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_000104429.1\|1036808_1038173_-	GntP family transporter	NA	NA	NA	NA
WP_001136918.1\|1038261_1039038_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_001278994.1\|1039042_1039681_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_000590404.1\|1039677_1040940_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.3e-135	61.2
WP_000847985.1\|1040936_1041845_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_001295181.1\|1042040_1042808_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_001141339.1\|1042858_1043515_-	protein-serine/threonine phosphatase	K7P7V3	Enterobacteria_phage	5.6e-50	45.3
WP_032202565.1\|1043620_1046182_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.9e-30	20.6

DBSCAN-SWA_2

1650800 : 1660242

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172408775.1\|1650800_1651727_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8
WP_000783120.1\|1651731_1652463_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|1652443_1652551_-	protein YohO	NA	NA	NA	NA
WP_001240401.1\|1652610_1653342_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001295431.1\|1653563_1655249_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_000598641.1\|1655245_1655965_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|1656011_1656482_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001373589.1\|1656522_1656984_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.6e-75	98.7
WP_001423058.1\|1657108_1659109_-	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.6
WP_001333512.1\|1659105_1660242_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.9e-162	97.7

DBSCAN-SWA_3

1750514 : 1760059

Bacillus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001115957.1\|1750514_1751909_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	4.9e-19	31.9
WP_000183060.1\|1752083_1752977_+	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.0e-46	42.0
WP_032173264.1\|1753302_1754319_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	9.8e-86	50.2
WP_032173265.1\|1754650_1755769_+	GDP-mannose 4,6-dehydratase	M4QRT5	Synechococcus_phage	1.4e-133	65.8
WP_032173266.1\|1755772_1756738_+	GDP-L-fucose synthase	D1LW79	Prochlorococcus_phage	6.4e-87	50.8
WP_047662165.1\|1756740_1757241_+	GDP-mannose mannosyl hydrolase	NA	NA	NA	NA
WP_032224293.1\|1757233_1758682_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	4.8e-54	31.4
WP_032172825.1\|1758685_1760059_+	colanic acid biosynthesis phosphomannomutase CpsG	A0A127AWJ1	Bacillus_phage	2.2e-32	27.9

DBSCAN-SWA_4

2258012 : 2321019

Enterobacteria_phage(45.45%)

protease,portal,integrase,tail,lysis

attL 2265588:2265604|attR 2295597:2295613

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001260865.1\|2258012_2258834_-\|protease	serine protease	NA	NA	NA	NA
WP_000233090.1\|2258933_2259017_-	hypothetical protein	NA	NA	NA	NA
WP_000743957.1\|2259109_2259445_-	acid shock protein	NA	NA	NA	NA
WP_000091840.1\|2259841_2261095_-	MFS transporter	NA	NA	NA	NA
WP_001019525.1\|2261201_2262095_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000225262.1\|2262229_2263450_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA
WP_000919231.1\|2263574_2264270_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_001315626.1\|2264222_2265515_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
2265588:2265604	attL	NA	NA	NA	NA
WP_000148710.1\|2265673_2266288_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
WP_000526477.1\|2266330_2267185_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000213028.1\|2267186_2267804_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	9.5e-76	59.6
WP_072169196.1\|2267814_2270238_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.3e-208	48.8
WP_001761878.1\|2270298_2272725_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	2.3e-213	49.3
WP_001295396.1\|2272923_2273229_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_072104773.1\|2273336_2274047_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_001138584.1\|2274049_2274610_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_000705197.1\|2274644_2274986_-	DUF1283 family protein	NA	NA	NA	NA
WP_001295395.1\|2275120_2275447_+	YnfA family protein	A0A218MNG8	uncultured_virus	7.6e-24	55.6
WP_001295394.1\|2275652_2276867_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000836059.1\|2276878_2277898_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	4.3e-17	26.2
WP_001360138.1\|2277955_2278066_+	hypothetical protein	NA	NA	NA	NA
WP_000877007.1\|2278085_2279366_-\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	7.3e-155	62.1
WP_000005552.1\|2279400_2279652_-	excisionase family protein	S4TND0	Salmonella_phage	2.2e-15	50.0
WP_032216168.1\|2279724_2282196_-	exonuclease	A0A192Y6E0	Salmonella_phage	3.2e-58	56.1
WP_001083273.1\|2282289_2282481_-\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_000854559.1\|2282477_2282666_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001328010.1\|2283081_2283369_+	hypothetical protein	NA	NA	NA	NA
WP_001241297.1\|2283337_2283715_-	hypothetical protein	NA	NA	NA	NA
WP_000379591.1\|2283714_2283867_-	DUF1391 family protein	M4QQ57	Salicola_phage	6.6e-07	53.2
WP_001003381.1\|2284059_2284467_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.5e-24	46.2
WP_000476993.1\|2284544_2284772_+	transcriptional regulator	NA	NA	NA	NA
WP_000705349.1\|2284755_2285277_+	hypothetical protein	NA	NA	NA	NA
WP_032200040.1\|2285952_2286375_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	8.2e-63	90.6
WP_001441843.1\|2286882_2287020_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.5e-18	97.8
WP_000753057.1\|2287057_2287234_+	hypothetical protein	A0A2R2X2A8	Escherichia_phage	1.9e-26	93.1
WP_000887491.1\|2288096_2288309_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.7e-29	97.1
WP_000980999.1\|2288525_2288777_+	hypothetical protein	NA	NA	NA	NA
WP_023147795.1\|2288843_2289122_+	hypothetical protein	I6PCV7	Cronobacter_phage	7.4e-12	48.4
WP_032200038.1\|2289123_2290173_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	3.3e-113	57.9
WP_001204787.1\|2290190_2290568_+	antitermination protein	Q777W5	Enterobacteria_phage	1.8e-53	82.5
WP_172408811.1\|2290723_2291248_-	outer membrane lipoprotein Blc	A0A1W6JNX6	Morganella_phage	1.3e-46	52.9
WP_000592549.1\|2291440_2292400_+	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_024168019.1\|2292806_2293520_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000839587.1\|2293710_2293926_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	2.9e-32	94.4
WP_112901559.1\|2293930_2294149_+	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	4.6e-17	62.3
WP_001013163.1\|2294173_2294470_-	hypothetical protein	NA	NA	NA	NA
WP_029364068.1\|2294597_2295131_+	lysozyme	K7PLY1	Enterobacteria_phage	2.6e-98	94.9
WP_001071774.1\|2295127_2295625_+	DUF2514 domain-containing protein	NA	NA	NA	NA
2295597:2295613	attR	NA	NA	NA	NA
WP_000066495.1\|2295988_2296201_+	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_071528545.1\|2296211_2296400_+	cold-shock protein	NA	NA	NA	NA
WP_001443523.1\|2296547_2296703_+	hypothetical protein	NA	NA	NA	NA
WP_001019207.1\|2296875_2297049_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_000548593.1\|2297344_2297551_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	3.4e-22	79.4
WP_000421825.1\|2298101_2298641_+	DUF1441 family protein	A5LH26	Enterobacteria_phage	1.8e-94	100.0
WP_001072975.1\|2300745_2300958_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_001459763.1\|2300957_2302433_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	2.0e-281	99.2
WP_077763148.1\|2302410_2304438_+\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	99.5
WP_001097045.1\|2304524_2304848_+	DUF2190 family protein	K7PLV6	Enterobacteria_phage	8.5e-52	100.0
WP_001283153.1\|2304840_2305116_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_000677108.1\|2305127_2305706_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	7.2e-102	99.5
WP_001079398.1\|2305702_2306104_+\|tail	tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
WP_000211099.1\|2306115_2306859_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.0e-132	99.6
WP_001298500.1\|2306919_2307306_+\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	3.3e-66	100.0
WP_001161009.1\|2307314_2307644_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_001459760.1\|2307615_2310690_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	95.5
WP_000447253.1\|2310689_2311019_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
WP_032198005.1\|2311028_2311727_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	1.2e-132	98.3
WP_032223304.1\|2311732_2312476_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.4e-150	98.4
WP_032198003.1\|2312373_2313021_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.5e-111	97.2
WP_001230352.1\|2316546_2317146_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	1.3e-109	97.5
WP_151326849.1\|2317210_2320438_+\|tail	prophage tail fiber N-terminal domain-containing protein	X2KTY7	Enterobacteria_phage	6.4e-06	58.8
WP_097408724.1\|2320437_2321019_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	8.9e-100	91.1

DBSCAN-SWA_5

2463817 : 2586687

118

Escherichia_phage(40.98%)

holin,terminase,coat,tail,tRNA,transposase,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000826416.1\|2463817_2465026_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A077SL42	Escherichia_phage	1.7e-206	93.0
WP_001261013.1\|2465557_2466226_-	DUF3313 domain-containing protein	NA	NA	NA	NA
WP_032202759.1\|2466528_2467122_-	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
WP_001300478.1\|2467118_2468111_-	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_001234023.1\|2468234_2469215_+	LbetaH domain-containing protein	NA	NA	NA	NA
WP_000140873.1\|2469206_2469746_-	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
WP_001296778.1\|2469808_2470033_-	YdcH family protein	NA	NA	NA	NA
WP_000375956.1\|2470172_2471828_-	glucan biosynthesis protein OpgD	NA	NA	NA	NA
WP_000013789.1\|2472052_2473396_-	VOC family protein	NA	NA	NA	NA
WP_000414567.1\|2473612_2474536_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001098568.1\|2474573_2476214_-	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA
WP_088551916.1\|2476589_2477958_+\|transposase	IS3-like element IS150 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.3e-112	100.0
WP_001320773.1\|2478058_2478208_+	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA
WP_000731833.1\|2478279_2478453_-	periplasmic protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
WP_000428998.1\|2478697_2479228_-	cytochrome b561	A0A0U2QLA7	Escherichia_phage	3.1e-19	44.9
WP_000115937.1\|2480459_2481899_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_001027964.1\|2482095_2482896_-	YdcF family protein	NA	NA	NA	NA
WP_025670749.1\|2483167_2487070_-	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
WP_000048951.1\|2487270_2487876_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_000627365.1\|2487926_2489243_-	phosphatase PAP2/dual specificity phosphatase family protein	NA	NA	NA	NA
WP_000471482.1\|2491067_2493374_-	DUF2773 domain-containing bactofilin	NA	NA	NA	NA
WP_063856378.1\|2493437_2494298_-	pyridoxine 4-dehydrogenase	NA	NA	NA	NA
WP_001123448.1\|2494529_2495120_-	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA
WP_000039895.1\|2495101_2496052_-	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
WP_000632280.1\|2496152_2497466_-	phenylacetate--CoA ligase	NA	NA	NA	NA
WP_001206197.1\|2497492_2498698_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_000018413.1\|2498697_2499120_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA
WP_000973371.1\|2499109_2500537_-	3-hydroxyacyl-CoA dehydrogenase PaaC	NA	NA	NA	NA
WP_032202595.1\|2500538_2501327_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
WP_001292353.1\|2501326_2502094_-	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA
WP_000206388.1\|2502090_2503161_-	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA
WP_001189201.1\|2503168_2503666_-	phenylacetate degradation protein PaaD	NA	NA	NA	NA
WP_001072837.1\|2503680_2504427_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA
WP_000073393.1\|2504435_2504723_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
WP_000191077.1\|2504734_2505664_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
WP_001186468.1\|2505948_2507994_+	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA
WP_000535466.1\|2508241_2510515_+	primary-amine oxidase	NA	NA	NA	NA
WP_000138615.1\|2510572_2512072_-	phenylacetaldehyde dehydrogenase	NA	NA	NA	NA
WP_025670752.1\|2512307_2513213_+	transcriptional regulator FeaR	NA	NA	NA	NA
WP_001300734.1\|2513384_2513711_-	YdbL family protein	NA	NA	NA	NA
WP_000698145.1\|2513718_2513904_-	YnbE family lipoprotein	NA	NA	NA	NA
WP_000900943.1\|2513900_2516540_-	YdbH family protein	NA	NA	NA	NA
WP_000762236.1\|2516747_2517737_+	D-lactate dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	1.5e-70	44.0
WP_001298828.1\|2517847_2518270_+	heat shock protein HslJ	NA	NA	NA	NA
WP_001295715.1\|2518266_2518533_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_000628243.1\|2518806_2522331_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_000837924.1\|2522697_2523831_+	porin OmpN	Q1MVN1	Enterobacteria_phage	8.3e-118	58.8
WP_001300461.1\|2523971_2524406_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.8e-28	52.8
WP_001157925.1\|2524671_2524845_-	hypothetical protein	NA	NA	NA	NA
WP_120795384.1\|2525184_2525298_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|2525366_2525600_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000078178.1\|2525916_2526507_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_001351719.1\|2526604_2527180_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-101	94.2
WP_172408814.1\|2527179_2530407_-\|tail	prophage tail fiber N-terminal domain-containing protein	X2KTY7	Enterobacteria_phage	6.4e-06	58.8
WP_001233121.1\|2530471_2531071_-	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	7.2e-105	93.0
WP_172408815.1\|2531138_2534618_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.6
WP_000090943.1\|2534678_2535281_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	4.0e-87	84.7
WP_001351716.1\|2535217_2535961_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.0e-145	96.7
WP_001152432.1\|2535966_2536665_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.1e-125	93.5
WP_000024051.1\|2536664_2537003_-\|tail	phage tail protein	H6WZM2	Escherichia_phage	4.0e-28	50.0
WP_172408816.1\|2536995_2540229_-\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	1.5e-111	34.4
WP_012565075.1\|2540702_2541062_-	hypothetical protein	NA	NA	NA	NA
WP_000094292.1\|2541212_2542175_-	hypothetical protein	A0A059VG08	Pseudomonas_phage	4.5e-56	39.2
WP_000144678.1\|2542201_2542594_-	hypothetical protein	NA	NA	NA	NA
WP_001029815.1\|2542590_2542971_-	hypothetical protein	A0A059VF88	Pseudomonas_phage	1.1e-18	44.4
WP_000524260.1\|2542971_2543355_-	hypothetical protein	A0A0P0I456	Acinetobacter_phage	2.2e-14	39.4
WP_000908084.1\|2543752_2543929_-	hypothetical protein	G8C7P8	Escherichia_phage	4.7e-12	62.3
WP_063856380.1\|2543971_2545111_-\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	3.1e-157	74.5
WP_000770042.1\|2545209_2545974_-	hypothetical protein	G8C7P6	Escherichia_phage	6.9e-84	64.2
WP_001351715.1\|2546078_2547191_-	hypothetical protein	I6PD76	Cronobacter_phage	4.2e-114	54.5
WP_000763704.1\|2547174_2548581_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	3.0e-186	69.0
WP_000625348.1\|2548583_2549885_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	59.6
WP_000089447.1\|2549865_2550960_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	5.9e-113	80.5
WP_000613571.1\|2550963_2551215_-	hypothetical protein	NA	NA	NA	NA
WP_001204037.1\|2551150_2552083_-	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	1.4e-83	54.9
WP_001291094.1\|2552075_2552867_-	ParB N-terminal domain-containing protein	R4TG31	Halovirus	2.8e-48	40.2
WP_001097895.1\|2553004_2554462_-	Trk system potassium uptake protein TrkG	NA	NA	NA	NA
WP_157915680.1\|2554599_2554728_-\|lysis	lysis protein	A0A1B5FPA1	Escherichia_phage	7.0e-10	81.6
WP_172408817.1\|2554693_2555065_-\|lysis	lysis protein	A0A0K2FJD0	Enterobacteria_phage	1.0e-53	94.9
WP_001351713.1\|2555061_2555559_-	lysozyme RrrD	M1FJA0	Enterobacteria_phage	3.2e-90	97.0
WP_000839565.1\|2555558_2555774_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.3e-32	94.4
WP_001348108.1\|2556025_2556400_-	hypothetical protein	NA	NA	NA	NA
WP_000506936.1\|2556571_2557000_-	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_152922190.1\|2558044_2558587_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	6.4e-76	75.7
WP_000247763.1\|2558583_2558874_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.7e-46	87.5
WP_025670565.1\|2558873_2559473_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	3.2e-105	91.5
WP_000813269.1\|2559941_2560097_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.9e-17	94.1
WP_000323025.1\|2560168_2560456_-	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000534858.1\|2560455_2560695_-	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_172408818.1\|2560719_2561025_+	hypothetical protein	NA	NA	NA	NA
WP_001349760.1\|2561227_2561560_+	FlxA-like family protein	NA	NA	NA	NA
WP_000589013.1\|2561996_2563337_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_122056959.1\|2563514_2563622_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	1.1e-08	96.6
WP_001117227.1\|2564133_2565333_+	MFS transporter	NA	NA	NA	NA
WP_000957772.1\|2565344_2566037_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_000019009.1\|2566033_2566915_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000625667.1\|2567045_2568323_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_001676522.1\|2568386_2570384_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.3e-21	26.2
WP_001151151.1\|2570724_2571147_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.8e-63	88.5
WP_069722905.1\|2571187_2572258_-	phage replisome organizer	A0A088CD36	Shigella_phage	4.7e-62	64.6
WP_000693836.1\|2572329_2572755_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000391949.1\|2572738_2573020_-	helix-turn-helix domain-containing protein	K7PHA1	Enterobacteria_phage	8.5e-24	72.6
WP_000362155.1\|2573120_2573540_+	hypothetical protein	K7PK07	Enterobacteria_phage	8.8e-25	65.1
WP_001169151.1\|2573938_2574094_+	YdaF family protein	M4QQ57	Salicola_phage	6.1e-08	55.3
WP_063856386.1\|2574090_2574579_-	super-infection exclusion protein B	NA	NA	NA	NA
WP_000560223.1\|2575020_2575242_+	killing protein KilR	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
WP_001352098.1\|2575241_2575412_+	conserved protein, Rac prophage	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4
WP_000632297.1\|2575486_2575762_+	protein RacC	A0A0U2QW85	Escherichia_phage	1.4e-42	96.7
WP_024232464.1\|2575863_2578464_+	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	3.9e-248	63.5
WP_000166319.1\|2578456_2579266_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	8.8e-106	71.5
WP_001317028.1\|2579322_2579517_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	5.8e-32	96.9
WP_000276809.1\|2579509_2579719_+	double-strand break reduction protein RcbA	A0A0U2QL97	Escherichia_phage	6.1e-27	98.4
WP_000079604.1\|2579797_2580013_+	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_000040852.1\|2580014_2581250_+	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	5.5e-240	98.8
WP_001157406.1\|2581301_2582237_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	5.9e-146	98.8
WP_000123737.1\|2582365_2583739_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_000387388.1\|2584216_2585200_-	zinc transporter ZntB	NA	NA	NA	NA
WP_000628058.1\|2585454_2586687_+	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	3.1e-17	39.5

DBSCAN-SWA_6

3024922 : 3111229

Salmonella_phage(57.63%)

protease,portal,head,plate,terminase,capsid,integrase,tail,tRNA,lysis

attL 3017885:3017900|attR 3113800:3113815

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3017885:3017900	attL	NA	NA	NA	NA
WP_000886683.1\|3024922_3026215_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_063856169.1\|3026305_3027649_-	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	3.6e-80	40.8
WP_032202383.1\|3027659_3028271_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_016231093.1\|3028425_3032376_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_000228473.1\|3032510_3033005_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_000537418.1\|3033549_3034515_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	8.5e-63	44.6
WP_001043578.1\|3034637_3036404_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	7.0e-23	24.3
WP_001202202.1\|3036404_3038126_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	4.9e-21	25.2
WP_001241676.1\|3038167_3038872_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3039156_3039375_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_000934041.1\|3040234_3042511_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_000520781.1\|3042541_3042862_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
WP_000410785.1\|3043184_3043409_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
WP_000188140.1\|3043481_3045428_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.1e-37	40.1
WP_000746460.1\|3045424_3046540_-	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_001380339.1\|3046690_3047647_+	DUF535 domain-containing protein	NA	NA	NA	NA
WP_000599802.1\|3047643_3049302_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_001298299.1\|3049726_3050422_+	aquaporin Z	NA	NA	NA	NA
WP_001338421.1\|3050916_3051816_+	L-lysine exporter LysO	NA	NA	NA	NA
WP_000458809.1\|3051959_3053612_+	hydroxylamine reductase	NA	NA	NA	NA
WP_000178677.1\|3053623_3054592_+	NADH oxidoreductase	NA	NA	NA	NA
WP_000815362.1\|3054724_3056443_+	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.2e-31	24.0
WP_000566372.1\|3056479_3057481_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_001136577.1\|3057491_3058922_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_001338420.1\|3059020_3060034_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_097504552.1\|3060030_3060861_-	N-acetylmuramoyl-L-alanine amidase AmiD	A0A1B0UZW5	Roseobacter_phage	5.7e-07	30.0
WP_001160737.1\|3060857_3061181_-	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_001270734.1\|3061306_3061822_+	lipoprotein	NA	NA	NA	NA
WP_000027213.1\|3062039_3062768_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	4.6e-29	37.1
WP_000756569.1\|3062785_3063517_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001001691.1\|3063523_3064240_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_000464491.1\|3064239_3064908_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_001295339.1\|3065198_3065930_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001149767.1\|3066128_3067256_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	6.0e-28	27.0
WP_000389260.1\|3067296_3067785_-	YbjO family protein	NA	NA	NA	NA
WP_001061658.1\|3067844_3068690_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_001093854.1\|3068686_3069640_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_000996005.1\|3069649_3070783_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	1.4e-29	34.0
WP_000126073.1\|3070877_3071990_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_000203025.1\|3072340_3072817_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_000684321.1\|3072904_3073807_-	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.6e-37	34.4
WP_000189159.1\|3073867_3074590_-	nitroreductase NfsA	NA	NA	NA	NA
WP_001201560.1\|3074573_3074861_-	DUF1418 family protein	NA	NA	NA	NA
WP_001195225.1\|3075020_3075278_+	glutaredoxin 1	A0A2I7SAE2	Vibrio_phage	3.0e-23	61.9
WP_000681108.1\|3075307_3075685_-	hypothetical protein	NA	NA	NA	NA
WP_001024876.1\|3075954_3077640_+	aspartate:alanine antiporter	NA	NA	NA	NA
WP_000972391.1\|3077875_3078094_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	7.5e-20	69.0
WP_001011800.1\|3078184_3079285_-	phage late control D family protein	E5G6Q3	Salmonella_phage	1.2e-177	86.3
WP_032258246.1\|3079281_3079767_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.8e-66	80.0
WP_172408824.1\|3079763_3082841_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	62.5
WP_000763314.1\|3082833_3082953_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	4.1e-12	84.6
WP_001281009.1\|3082967_3083270_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
WP_001207660.1\|3083324_3083840_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
WP_172408825.1\|3083849_3085022_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.2e-205	90.5
WP_000905023.1\|3085164_3085731_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	1.4e-86	86.3
WP_172408855.1\|3085761_3086265_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	5.4e-45	56.6
WP_040073407.1\|3086264_3086867_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	8.6e-98	90.5
WP_032172853.1\|3086838_3087282_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	6.2e-37	50.3
WP_172408826.1\|3087284_3088787_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	3.6e-153	78.4
WP_048217755.1\|3088783_3089389_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	2.6e-110	92.0
WP_061548810.1\|3089381_3090290_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	5.9e-143	90.4
WP_001522712.1\|3090276_3090636_-	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	5.0e-53	88.2
WP_032344227.1\|3090632_3091211_-\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	7.2e-94	87.0
WP_061548811.1\|3091367_3093164_+	AAA family ATPase	NA	NA	NA	NA
WP_061548812.1\|3093170_3093614_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	3.1e-60	83.6
WP_001522707.1\|3093606_3094038_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	4.9e-71	93.0
WP_061548813.1\|3094133_3094562_-\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	1.4e-46	75.9
WP_000727851.1\|3094558_3094936_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	3.9e-16	40.0
WP_001069905.1\|3094937_3095450_-	lysozyme	E5G6N1	Salmonella_phage	3.1e-88	92.3
WP_000171568.1\|3095430_3095646_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
WP_061548814.1\|3095649_3095853_-\|tail	tail protein X	E5G6M9	Salmonella_phage	8.8e-31	91.0
WP_000673529.1\|3095852_3096317_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.6
WP_042099595.1\|3096412_3097063_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	3.3e-111	95.4
WP_061548815.1\|3097066_3098125_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	6.4e-181	93.1
WP_021532216.1\|3098141_3098975_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	3.7e-123	85.2
WP_061351135.1\|3099117_3100884_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.5
WP_000520364.1\|3100883_3101918_+\|portal	phage portal protein	E5G6M3	Salmonella_phage	2.4e-172	89.0
WP_000497736.1\|3101969_3103121_-	TIGR02391 family protein	NA	NA	NA	NA
WP_001217575.1\|3103430_3103664_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154434.1\|3103674_3103863_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_040075603.1\|3104016_3106431_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	98.0
WP_047204267.1\|3106427_3107285_-	DNA adenine methylase	E5G6L8	Salmonella_phage	2.8e-158	95.4
WP_000752610.1\|3107281_3107509_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	7.8e-36	98.7
WP_001504056.1\|3107508_3107742_-	DUF2732 family protein	E5G6L6	Salmonella_phage	7.0e-32	96.1
WP_001504055.1\|3107809_3108151_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	5.1e-55	97.3
WP_001504054.1\|3108114_3108315_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	4.6e-32	95.5
WP_059340354.1\|3108322_3108832_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	3.7e-86	97.6
WP_001247707.1\|3108864_3109086_-	hypothetical protein	NA	NA	NA	NA
WP_001047320.1\|3109211_3109781_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	2.9e-39	43.9
WP_001513672.1\|3109796_3109988_+	hypothetical protein	A0A0R6PIH8	Moraxella_phage	6.8e-09	65.9
WP_000290937.1\|3110176_3111229_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	3.6e-107	57.3
3113800:3113815	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3649712 : 3732852

Enterobacteria_phage(32.31%)

holin,protease,portal,plate,terminase,capsid,integrase,tail,head

attL 3686413:3686468|attR 3728941:3728996

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000131044.1\|3649712_3651746_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4
WP_001335745.1\|3651874_3652462_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_000089110.1\|3652475_3653948_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001159095.1\|3653961_3655632_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.7e-61	31.2
WP_001209100.1\|3655844_3656513_+	hypothetical protein	NA	NA	NA	NA
WP_000370307.1\|3656755_3657451_-	lactate utilization protein C	NA	NA	NA	NA
WP_000023927.1\|3657443_3658871_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_001102108.1\|3658881_3659601_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000339594.1\|3660127_3660982_-	DNA-binding transcriptional regulator RclR	NA	NA	NA	NA
WP_001046307.1\|3661207_3662533_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.5e-113	47.6
WP_000474084.1\|3662641_3662878_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001299021.1\|3662889_3663483_+	reactive chlorine species resistance protein RclC	NA	NA	NA	NA
WP_001459486.1\|3664072_3664924_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001564478.1\|3665063_3669320_-	intimin-like adhesin FdeC	NA	NA	NA	NA
WP_000662258.1\|3670434_3670536_+	hypothetical protein	NA	NA	NA	NA
WP_000803998.1\|3670899_3671163_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000866436.1\|3671162_3671303_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_001147279.1\|3671337_3671565_-	hypothetical protein	NA	NA	NA	NA
WP_001301257.1\|3672388_3672931_+	ECP biosynthesis operon DNA-binding transcriptional regulator EcpR	NA	NA	NA	NA
WP_000730972.1\|3673005_3673593_+	common pilus major fimbrillin subunit EcpA	NA	NA	NA	NA
WP_000716383.1\|3673650_3674319_+	fimbrial chaperone EcpB	NA	NA	NA	NA
WP_001301239.1\|3676860_3678504_+	fimbrial adhesin EcpD	NA	NA	NA	NA
WP_001301243.1\|3678472_3679183_+	fimbrial chaperone EcpE	NA	NA	NA	NA
WP_001303809.1\|3679495_3679825_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_000070699.1\|3681103_3681793_+	aldehyde dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_000643332.1\|3681789_3682746_+	aldehyde oxidoreductase FAD-binding subunit PaoB	NA	NA	NA	NA
WP_000667036.1\|3682742_3684941_+	aldehyde oxidoreductase molybdenum-binding subunit PaoC	A0A0P0I429	Acinetobacter_phage	4.3e-38	25.7
WP_000121346.1\|3684950_3685907_+	molybdenum cofactor insertion chaperone PaoD	NA	NA	NA	NA
WP_001111347.1\|3685885_3686296_+	hypothetical protein	NA	NA	NA	NA
3686413:3686468	attL	NA	NA	NA	NA
WP_012602456.1\|3687113_3688328_+	type II restriction endonuclease	E5E3X4	Burkholderia_phage	7.9e-34	38.6
WP_072095179.1\|3688362_3689766_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.0e-106	50.1
WP_000355484.1\|3690199_3690973_+	hypothetical protein	G9IA57	Pseudomonas_phage	2.4e-36	38.5
WP_000904983.1\|3691030_3691585_-	site-specific DNA recombinase	A0A1S6L009	Salmonella_phage	2.8e-87	87.3
WP_104769903.1\|3691614_3692118_+\|tail	tail fiber protein	K7P7Q7	Enterobacteria_phage	3.7e-46	60.6
WP_053903524.1\|3692117_3692720_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	1.0e-98	90.5
WP_172408831.1\|3692691_3693135_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.9e-46	60.5
WP_000383554.1\|3693782_3694367_-	YmfQ family protein	O22003	Shigella_phage	1.6e-112	99.0
WP_000785308.1\|3694357_3695416_-\|plate	baseplate J/gp47 family protein	U5P424	Shigella_phage	1.6e-200	98.9
WP_000424745.1\|3695402_3695828_-	phage GP46 family protein	U5P0R9	Shigella_phage	6.7e-81	99.3
WP_001519515.1\|3695827_3696376_-\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	1.2e-95	97.8
WP_001519514.1\|3696375_3697455_-	hypothetical protein	U5P0H6	Shigella_phage	3.4e-206	99.4
WP_000219910.1\|3697451_3698780_-	DNA circularization N-terminal domain-containing protein	Q8SBG8	Shigella_phage	2.5e-246	98.9
WP_001519513.1\|3698840_3700676_-\|tail	phage tail tape measure protein	S5FM63	Shigella_phage	2.2e-306	99.3
WP_000661054.1\|3700817_3701087_-\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	3.5e-43	100.0
WP_000090997.1\|3701086_3701443_-\|tail	phage tail tube protein	U5P076	Shigella_phage	9.0e-63	99.2
WP_001519512.1\|3701442_3702939_-\|tail	phage tail sheath subtilisin-like domain-containing protein	M1FN90	Enterobacteria_phage	3.8e-272	98.8
WP_000497751.1\|3702922_3703093_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
WP_000779279.1\|3703101_3703662_-	hypothetical protein	M1FQV7	Enterobacteria_phage	2.3e-105	99.5
WP_000213502.1\|3703658_3704165_-	hypothetical protein	M1FPE2	Enterobacteria_phage	1.7e-91	100.0
WP_001519511.1\|3704139_3704550_-\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	2.9e-73	97.1
WP_000927707.1\|3704546_3704870_-\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	3.3e-56	98.1
WP_000601364.1\|3704872_3705073_-	hypothetical protein	S5FNU1	Shigella_phage	8.4e-26	98.5
WP_172408832.1\|3705122_3706328_-\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	1.7e-222	99.0
WP_001193633.1\|3706342_3706993_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	7.3e-119	99.5
WP_000466255.1\|3706970_3708212_-\|portal	phage portal protein	U5P411	Shigella_phage	2.0e-242	99.8
WP_000605606.1\|3708211_3708394_-	hypothetical protein	S5FXQ9	Shigella_phage	1.7e-25	100.0
WP_065312442.1\|3708405_3709902_-\|terminase	terminase large subunit	A0A1C9IIA1	Salmonella_phage	1.7e-299	99.6
WP_000929174.1\|3710152_3710638_-\|terminase	phage terminase small subunit P27 family	Q8SBI1	Shigella_phage	2.1e-86	99.4
WP_089586273.1\|3710763_3711114_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	1.2e-62	96.6
WP_001089762.1\|3711264_3711600_+	hypothetical protein	NA	NA	NA	NA
WP_089586272.1\|3711700_3712270_+	hypothetical protein	NA	NA	NA	NA
WP_001356320.1\|3712433_3712826_-	DUF2570 domain-containing protein	U5P0U9	Shigella_phage	9.3e-53	87.6
WP_113416945.1\|3712809_3713286_-	glycoside hydrolase family 104 protein	S5FV07	Shigella_phage	1.6e-83	94.9
WP_000544528.1\|3713272_3713578_-\|holin	phage holin family protein	A0A286N2Q5	Klebsiella_phage	7.0e-40	87.6
WP_029396340.1\|3713899_3714589_-	antitermination protein	I6PDF8	Cronobacter_phage	1.1e-56	48.5
WP_001568558.1\|3714585_3714726_-	YlcG family protein	K7PHH3	Enterobacteria_phage	1.3e-09	71.1
WP_134894238.1\|3714722_3715085_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	2.5e-60	95.7
WP_074468305.1\|3715081_3715372_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	3.3e-47	92.7
WP_000211034.1\|3715364_3715535_-	hypothetical protein	K7P7K0	Enterobacteria_phage	2.4e-13	69.8
WP_050010320.1\|3715534_3715990_-	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	5.4e-60	67.5
WP_001303586.1\|3715986_3716088_-	hypothetical protein	NA	NA	NA	NA
WP_000017329.1\|3716177_3716687_-	hypothetical protein	NA	NA	NA	NA
WP_162721248.1\|3717224_3717788_-	hypothetical protein	K7P7J4	Enterobacteria_phage	2.2e-10	72.3
WP_096891597.1\|3718194_3718404_-	hypothetical protein	A0A0F6TK62	Escherichia_coli_O157_typing_phage	4.7e-27	79.7
WP_000062289.1\|3718421_3718622_-	hypothetical protein	NA	NA	NA	NA
WP_029488730.1\|3718618_3718912_-	protein ren	A0A0N6WES4	Escherichia_phage	1.9e-42	94.6
WP_172408833.1\|3718908_3719610_-	Replication protein P	M1FJ72	Enterobacteria_phage	1.2e-127	97.9
WP_172408834.1\|3719606_3720626_-	replication protein	M1FN81	Enterobacteria_phage	2.2e-109	67.3
WP_021571942.1\|3720622_3721162_-	hypothetical protein	M9NZI6	Enterobacteria_phage	4.4e-61	66.1
WP_001067459.1\|3721243_3721474_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	8.5e-22	68.0
WP_000858975.1\|3721578_3722268_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_060710353.1\|3722556_3723027_+	SocA family protein	D0UIM3	Aggregatibacter_phage	5.6e-20	40.1
WP_060710354.1\|3723026_3723410_+	hypothetical protein	NA	NA	NA	NA
WP_000233576.1\|3723883_3724090_+	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000995439.1\|3724165_3724462_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_001302855.1\|3724467_3725253_+	phage recombination protein Bet	A0A0N7BTT9	Escherichia_phage	6.3e-149	100.0
WP_000186846.1\|3725249_3725930_+	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	3.5e-132	99.6
WP_000682559.1\|3725926_3726085_+	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	1.5e-22	96.2
WP_000129285.1\|3726081_3726639_+	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.0e-61	62.3
WP_001386642.1\|3726649_3726931_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
WP_000763373.1\|3727029_3727248_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	1.8e-34	95.8
WP_000488407.1\|3727295_3727574_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
WP_000051905.1\|3727772_3728936_+\|integrase	site-specific integrase	S5FNS2	Shigella_phage	4.1e-229	100.0
WP_000893279.1\|3729140_3730394_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.2e-95	47.0
3728941:3728996	attR	NA	NA	NA	NA
WP_001285288.1\|3730405_3731509_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000749863.1\|3731796_3732852_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	9.1e-119	61.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP021893

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection