CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015029	Frederiksenia canicola strain HPA 21 chromosome, complete genome	2 crisprs	cas1,cas4,cas7,cas8c,cas5,cas3,DEDDh,cas2,DinG,csa3	2	7	5	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015029_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015029_1

9347-12594

TypeI

Consensus_repeat	Method
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CRISPRCasFinder
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CRT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	PILER-CR

48 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP015029_1

>merge|NZ_CP015029|1|9347-12594|CRISPRCasFinder,CRT,PILER-CR
GATTCAGCTCCCAGCTAGATTTAGGTGGCTGGTACTGCCATTCCGAATGCGTTGCTAGATGCGATTTTGGTTTAAACACACAGCCACGCGTAGGTGGCTGGATATTTTCAATGTTAAAAGGGGGGATAGAAATATGACGTTTAAACACACAGCCACGCGTAGGTGGCTGGGATCTAATAATGCCGACAGATTAGCTTTGTCGGTCGTTTAAACACACAGCCACGCGTAGGTGGCTGGTAGCCCCGCTCGGGTGCGAACAGGGGCAGTGGTTGTTTAAACACACAGCCACGCGTAGGTGGCTGGTTGGGGCAACCTATTACTTTGCCTTTGAAGCCTTGGTTTAAACACACAGCCACGCGTAGGTGGCTGGGCTCATGCAAAATGGATAACATCACTTTTCTCGTGTTTAAACACACAGCCACGCGTAGGTGGCTGGACTATCAGAGTGAAAACTTCAGAGTGGTGGGCATGTTTAAACACACAGCCACGCGTAGGTGGCTGGCTACCACCCCGAAGATATTAAGCTGATTAACGTAGTTTAAACACACAGCCACGCGTAGGTGGCTGGGTCGCCAATGGATCGCAAAGCTTTTTACCAGTCTGTTTAAACACACAGCCACGCGTAGGTGGCTGGCGCTATCAGGATAGTGAGTTGATTTATCTACCTTGTGGTTTAAACACACAGCCACGCGTAGGTGGCTGGGGAGCGGTCAGCAATTTTGCCGATCGCCATCAAGCGTTTAAACACACAGCCACGCGTAGGTGGCTGGGCAGAGCTTGGACTATTTGCTCTACGCCCTTTACTTGTTTAAACACACAGCCACGCGTAGGTGGCTGGTCTTCACTTAACTCAAATGATTTTTTTTCTTTGGGTTTAAACACACAGCCACGCGTAGGTGGCTGGCACCACCAAACTCTATTTTTGTGATCTGTGTCGAGTTTAAACACACAGCCACGCGTAGGTGGCTGGCACCAATAAGGGTGTTCCTTTGTGCTATTAGAGATTGTTTAAACACACAGCCACGCGTAGGTGGCTGGTTGCCGTATGATTTACCCAAATCACACAAAAGGAGTTTAAACACACAGCCACGCGTAGGTGGCTGGATTGAGTTATGCGAAAAAGGCAGTCAATGAGCTAGTTTAAACACACAGCCACGCGTAGGTGGCTGGCACCAATAAGGGTGTTCCTTTGTGCTATTAGAGATTGTTTAAACACACAGCCACGCGTAGGTGGCTGGGCATCAAACATTGATTTGTCTTGCATATAAATCGAGTTTAAACACACAGCCACGCGTAGGTGGCTGGCCATAGTAAAATAGCCTTGTTTTCAGTGATTAGTTGTTTAAACACACAGCCACGCGTAGGTGGCTGGGCGTTAGTGATGGATGCCACCGAAGAGCTGATCGATGTTTAAACACACAGCCACGCGTAGGTGGCTGGCTTCTATTTTTGAGCGAGTGCCGCCCCGCATCGCGTTTAAACACACAGCCACGCGTAGGTGGCTGGTTCTTAAAAAAATAAAGGAAATATATTCCTAAATGTTTAAACACACAGCCACGCGTAGGTGGCTGGCTTACTCACGAAAGACAACATCAGTCAGTATGTTGGGTTTAAACACACAGCCACGCGTAGGTGGCTGGCGCCTTTAGCGTGAGGTTCGTTGCATTTTGCAACAAGTTTAAACACACAGCCACGCGTAGGTGGCTGGCTGCAGTGGTTGGGTTAGGTCTTCTTCAAATACAGCAGTTTAAACACACAGCCACGCGTAGGTGGCTGGCCAGACTCTTACTTCATTAGAGAGTGCTTATCGTGTTTAAACACACAGCCACGCGTAGGTGGCTGGAAGGAGGTACTTGCATCAGCCTAAAACGTAAAAATGTTTAAACACACAGCCACGCGTAGGTGGCTGGGTTTTCCGCACGCAACAGATTTTGATTAGTGAAGGGTTTAAACACACAGCCACGCGTAGGTGGCTGGGGCAGTTAGCTTTGATTTGCTCAGAGCGTAGGAAGTTTAAACACACAGCCACGCGTAGGTGGCTGGATATGGCATCTGTATTTCGTGCCATTGCTGTATGGTTTAAACACACAGCCACGCGTAGGTGGCTGGAGGTGCACCATGTCTATCAGCAAACTTCTGATGATGTTTAAACACACAGCCACGCGTAGGTGGCTGGTCAAACCTGATATCATCTACGTACACCAGTATAAACGTTTAAACACACAGCCACGCGTAGGTGGCTGGATCCGTTCCATGAGATTCTGGTAGTACCAATTACCGAGTTTAAACACACAGCCACGCGTAGGTGGCTGGGTTTACTCAACGCATAGGTGACATCATCTCTGCTGAGTTTAAACACACAGCCACGCGTAGGTGGCTGGGGTGCAAATGAGGGGCGAGATTTTTTGAGCTTAGGTGTTTAAACACACAGCCACGCGTAGGTGGCTGGTATGGTCGAGGACGTAATCGGGGGGATCACGAATGTTTAAACACACAGCCACGCGTAGGTGGCTGGAGAAAAAAAATAAATCGATCGAGAAAAATAGATCGTTTAAACACACAGCCACGCGTAGGTGGCTGGATCTGTTTTATGACACACCTTTTGTATGTCGATTGGTTTAAACACACAGCCACGCGTAGGTGGCTGGACCTGACCGAACATCTGAATATCTTTGGCATTGGTTTAAACACACAGCCACGCGTAGGTGGCTGGTAGTTGACCACATTGAGGATAAACTACAGTCATTTGTTTAAACACACAGCCACGCGTAGGTGGCTGGCCTAGAATAGCCGTATGTCCTAAGTGCATATCGCCAGTTTAAACACACAGCCACGCGTAGGTGGCTGGGACAATAAACGGAGCTGTCTATTAGATACCACGATGTTTAAACACACAGCCACGCGTAGGTGGCTGGACGCAAAATTGAGTTTAAGCGTAGCGTATTTCATGTTTAAACACACAGCCACGCGTAGGTGGCTGGAGTATCTGGTTTTGAAATCGCTAACGACGATTACGTTTAAACACACAGCCACGCGTAGGTGGCTGGGTACGATAGATGGTTGCGCATGTATGTGGATAGTGTTTAAACACACAGCCACGCGTAGGTGGCTGGTTACGTACTACTCTAACTGACTTAGCACCGATATAGTTTAAACACACAGCCACGCGTAGGTGGCTGGCTGTGCAAGCGGTGCATTTTATGCAGCTTTCAAAACGTTTAAACACACAGCCACGCGTAGGTGGCTGG

>NZ_CP015029|1|1|9347-12594|CRISPRCasFinder
GATTCAGCTCCCAGCTAGATTTAGGTGGCTGG	TACTGCCATTCCGAATGCGTTGCTAGATGCGATTTTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATATTTTCAATGTTAAAAGGGGGGATAGAAATATGAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GATCTAATAATGCCGACAGATTAGCTTTGTCGGTC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TAGCCCCGCTCGGGTGCGAACAGGGGCAGTGGTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTGGGGCAACCTATTACTTTGCCTTTGAAGCCTTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCTCATGCAAAATGGATAACATCACTTTTCTCGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ACTATCAGAGTGAAAACTTCAGAGTGGTGGGCAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTACCACCCCGAAGATATTAAGCTGATTAACGTA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTCGCCAATGGATCGCAAAGCTTTTTACCAGTCT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CGCTATCAGGATAGTGAGTTGATTTATCTACCTTGTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GGAGCGGTCAGCAATTTTGCCGATCGCCATCAAGC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCAGAGCTTGGACTATTTGCTCTACGCCCTTTACTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TCTTCACTTAACTCAAATGATTTTTTTTCTTTGG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CACCACCAAACTCTATTTTTGTGATCTGTGTCGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CACCAATAAGGGTGTTCCTTTGTGCTATTAGAGATT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTGCCGTATGATTTACCCAAATCACACAAAAGGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATTGAGTTATGCGAAAAAGGCAGTCAATGAGCTA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CACCAATAAGGGTGTTCCTTTGTGCTATTAGAGATT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCATCAAACATTGATTTGTCTTGCATATAAATCGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CCATAGTAAAATAGCCTTGTTTTCAGTGATTAGTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCGTTAGTGATGGATGCCACCGAAGAGCTGATCGAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTTCTATTTTTGAGCGAGTGCCGCCCCGCATCGC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTCTTAAAAAAATAAAGGAAATATATTCCTAAAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTTACTCACGAAAGACAACATCAGTCAGTATGTTGG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CGCCTTTAGCGTGAGGTTCGTTGCATTTTGCAACAA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTGCAGTGGTTGGGTTAGGTCTTCTTCAAATACAGCA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CCAGACTCTTACTTCATTAGAGAGTGCTTATCGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AAGGAGGTACTTGCATCAGCCTAAAACGTAAAAAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTTTTCCGCACGCAACAGATTTTGATTAGTGAAGG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GGCAGTTAGCTTTGATTTGCTCAGAGCGTAGGAA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATATGGCATCTGTATTTCGTGCCATTGCTGTATG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AGGTGCACCATGTCTATCAGCAAACTTCTGATGAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TCAAACCTGATATCATCTACGTACACCAGTATAAAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATCCGTTCCATGAGATTCTGGTAGTACCAATTACCGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTTTACTCAACGCATAGGTGACATCATCTCTGCTGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GGTGCAAATGAGGGGCGAGATTTTTTGAGCTTAGGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TATGGTCGAGGACGTAATCGGGGGGATCACGAAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AGAAAAAAAATAAATCGATCGAGAAAAATAGATC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATCTGTTTTATGACACACCTTTTGTATGTCGATTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ACCTGACCGAACATCTGAATATCTTTGGCATTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TAGTTGACCACATTGAGGATAAACTACAGTCATTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CCTAGAATAGCCGTATGTCCTAAGTGCATATCGCCA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GACAATAAACGGAGCTGTCTATTAGATACCACGAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ACGCAAAATTGAGTTTAAGCGTAGCGTATTTCAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AGTATCTGGTTTTGAAATCGCTAACGACGATTAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTACGATAGATGGTTGCGCATGTATGTGGATAGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTACGTACTACTCTAACTGACTTAGCACCGATATA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTGTGCAAGCGGTGCATTTTATGCAGCTTTCAAAAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG

>NZ_CP015029|1|1|9347-12594|CRT
GATTCAGCTCCCAGCTAGATTTAGGTGGCTGG	TACTGCCATTCCGAATGCGTTGCTAGATGCGATTTTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATATTTTCAATGTTAAAAGGGGGGATAGAAATATGAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GATCTAATAATGCCGACAGATTAGCTTTGTCGGTC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TAGCCCCGCTCGGGTGCGAACAGGGGCAGTGGTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTGGGGCAACCTATTACTTTGCCTTTGAAGCCTTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCTCATGCAAAATGGATAACATCACTTTTCTCGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ACTATCAGAGTGAAAACTTCAGAGTGGTGGGCAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTACCACCCCGAAGATATTAAGCTGATTAACGTA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTCGCCAATGGATCGCAAAGCTTTTTACCAGTCT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CGCTATCAGGATAGTGAGTTGATTTATCTACCTTGTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GGAGCGGTCAGCAATTTTGCCGATCGCCATCAAGC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCAGAGCTTGGACTATTTGCTCTACGCCCTTTACTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TCTTCACTTAACTCAAATGATTTTTTTTCTTTGG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CACCACCAAACTCTATTTTTGTGATCTGTGTCGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CACCAATAAGGGTGTTCCTTTGTGCTATTAGAGATT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTGCCGTATGATTTACCCAAATCACACAAAAGGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATTGAGTTATGCGAAAAAGGCAGTCAATGAGCTA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CACCAATAAGGGTGTTCCTTTGTGCTATTAGAGATT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCATCAAACATTGATTTGTCTTGCATATAAATCGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CCATAGTAAAATAGCCTTGTTTTCAGTGATTAGTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCGTTAGTGATGGATGCCACCGAAGAGCTGATCGAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTTCTATTTTTGAGCGAGTGCCGCCCCGCATCGC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTCTTAAAAAAATAAAGGAAATATATTCCTAAAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTTACTCACGAAAGACAACATCAGTCAGTATGTTGG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CGCCTTTAGCGTGAGGTTCGTTGCATTTTGCAACAA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTGCAGTGGTTGGGTTAGGTCTTCTTCAAATACAGCA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CCAGACTCTTACTTCATTAGAGAGTGCTTATCGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AAGGAGGTACTTGCATCAGCCTAAAACGTAAAAAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTTTTCCGCACGCAACAGATTTTGATTAGTGAAGG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GGCAGTTAGCTTTGATTTGCTCAGAGCGTAGGAA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATATGGCATCTGTATTTCGTGCCATTGCTGTATG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AGGTGCACCATGTCTATCAGCAAACTTCTGATGAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TCAAACCTGATATCATCTACGTACACCAGTATAAAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATCCGTTCCATGAGATTCTGGTAGTACCAATTACCGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTTTACTCAACGCATAGGTGACATCATCTCTGCTGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GGTGCAAATGAGGGGCGAGATTTTTTGAGCTTAGGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TATGGTCGAGGACGTAATCGGGGGGATCACGAAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AGAAAAAAAATAAATCGATCGAGAAAAATAGATC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATCTGTTTTATGACACACCTTTTGTATGTCGATTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ACCTGACCGAACATCTGAATATCTTTGGCATTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TAGTTGACCACATTGAGGATAAACTACAGTCATTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CCTAGAATAGCCGTATGTCCTAAGTGCATATCGCCA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GACAATAAACGGAGCTGTCTATTAGATACCACGAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ACGCAAAATTGAGTTTAAGCGTAGCGTATTTCAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AGTATCTGGTTTTGAAATCGCTAACGACGATTAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTACGATAGATGGTTGCGCATGTATGTGGATAGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTACGTACTACTCTAACTGACTTAGCACCGATATA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTGTGCAAGCGGTGCATTTTATGCAGCTTTCAAAAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG

>NZ_CP015029|1|1|9416-12594|PILER-CR
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATATTTTCAATGTTAAAAGGGGGGATAGAAATATGAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GATCTAATAATGCCGACAGATTAGCTTTGTCGGTC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TAGCCCCGCTCGGGTGCGAACAGGGGCAGTGGTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTGGGGCAACCTATTACTTTGCCTTTGAAGCCTTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCTCATGCAAAATGGATAACATCACTTTTCTCGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ACTATCAGAGTGAAAACTTCAGAGTGGTGGGCAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTACCACCCCGAAGATATTAAGCTGATTAACGTA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTCGCCAATGGATCGCAAAGCTTTTTACCAGTCT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CGCTATCAGGATAGTGAGTTGATTTATCTACCTTGTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GGAGCGGTCAGCAATTTTGCCGATCGCCATCAAGC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCAGAGCTTGGACTATTTGCTCTACGCCCTTTACTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TCTTCACTTAACTCAAATGATTTTTTTTCTTTGG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CACCACCAAACTCTATTTTTGTGATCTGTGTCGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CACCAATAAGGGTGTTCCTTTGTGCTATTAGAGATT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTGCCGTATGATTTACCCAAATCACACAAAAGGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATTGAGTTATGCGAAAAAGGCAGTCAATGAGCTA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CACCAATAAGGGTGTTCCTTTGTGCTATTAGAGATT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCATCAAACATTGATTTGTCTTGCATATAAATCGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CCATAGTAAAATAGCCTTGTTTTCAGTGATTAGTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GCGTTAGTGATGGATGCCACCGAAGAGCTGATCGAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTTCTATTTTTGAGCGAGTGCCGCCCCGCATCGC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTCTTAAAAAAATAAAGGAAATATATTCCTAAAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTTACTCACGAAAGACAACATCAGTCAGTATGTTGG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CGCCTTTAGCGTGAGGTTCGTTGCATTTTGCAACAA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTGCAGTGGTTGGGTTAGGTCTTCTTCAAATACAGCA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CCAGACTCTTACTTCATTAGAGAGTGCTTATCGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AAGGAGGTACTTGCATCAGCCTAAAACGTAAAAAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTTTTCCGCACGCAACAGATTTTGATTAGTGAAGG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GGCAGTTAGCTTTGATTTGCTCAGAGCGTAGGAA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATATGGCATCTGTATTTCGTGCCATTGCTGTATG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AGGTGCACCATGTCTATCAGCAAACTTCTGATGAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TCAAACCTGATATCATCTACGTACACCAGTATAAAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATCCGTTCCATGAGATTCTGGTAGTACCAATTACCGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTTTACTCAACGCATAGGTGACATCATCTCTGCTGA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GGTGCAAATGAGGGGCGAGATTTTTTGAGCTTAGGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TATGGTCGAGGACGTAATCGGGGGGATCACGAAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AGAAAAAAAATAAATCGATCGAGAAAAATAGATC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ATCTGTTTTATGACACACCTTTTGTATGTCGATTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ACCTGACCGAACATCTGAATATCTTTGGCATTG
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TAGTTGACCACATTGAGGATAAACTACAGTCATTT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CCTAGAATAGCCGTATGTCCTAAGTGCATATCGCCA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GACAATAAACGGAGCTGTCTATTAGATACCACGAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	ACGCAAAATTGAGTTTAAGCGTAGCGTATTTCAT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	AGTATCTGGTTTTGAAATCGCTAACGACGATTAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	GTACGATAGATGGTTGCGCATGTATGTGGATAGT
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	TTACGTACTACTCTAACTGACTTAGCACCGATATA
GTTTAAACACACAGCCACGCGTAGGTGGCTGG	CTGTGCAAGCGGTGCATTTTATGCAGCTTTCAAAAC
GTTTAAACACACAGCCACGCGTAGGTGGCTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015029.1\|WP_123956663.1\|2551_3781_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_CP015029.1\|WP_123955669.1\|5076_5649_+\|5-formyltetrahydrofolate-cyclo-ligase	unknown	unknown	gnl\|CDD\|274270
NZ_CP015029.1\|WP_123955656.1\|21396_23073_-\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|227296
NZ_CP015029.1\|WP_123955662.1\|13137_14151_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP015029.1\|WP_123955655.1\|23091_23700_-\|protein-TadF	unknown	unknown	gnl\|CDD\|374906
NZ_CP015029.1\|WP_123955661.1\|14450_15053_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP015029.1\|WP_123955666.1\|6553_6919_+\|YcfL-family-protein	unknown	unknown	gnl\|CDD\|176923
NZ_CP015029.1\|WP_123955659.1\|15980_18008_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP015029.1\|WP_123955668.1\|5648_6095_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931
NZ_CP015029.1\|WP_123955660.1\|15117_15960_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP015029.1\|WP_123955658.1\|18004_18727_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187782
NZ_CP015029.1\|WP_123955663.1\|12786_13080_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP015029.1\|WP_123955667.1\|6182_6551_+\|purine-nucleoside-phosphoramidase	unknown	unknown	gnl\|CDD\|182648
NZ_CP015029.1\|WP_123955672.1\|1715_2564_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|225464
NZ_CP015029.1\|WP_123955670.1\|4510_4840_+\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|225571
NZ_CP015029.1\|WP_123955657.1\|18735_21192_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP015029.1\|WP_123955671.1\|3890_4436_-\|UPF0149-family-protein	unknown	unknown	gnl\|CDD\|234976
NZ_CP015029.1\|WP_123955654.1\|23671_24232_-\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|377921
NZ_CP015029.1\|WP_123955665.1\|7072_7840_+\|phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|270700
NZ_CP015029.1\|WP_123955664.1\|8054_9248_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645

Protein	Function_ID	Function_description	E-value
NZ_CP015029.1\|WP_123956663.1\|2551_3781_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	2.20429e-120
NZ_CP015029.1\|WP_123955669.1\|5076_5649_+\|5-formyltetrahydrofolate-cyclo-ligase	gnl\|CDD\|274270	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase. This enzyme, 5,10-methenyltetrahydrofolate synthetase, is also called 5-formyltetrahydrofolate cycloligase. Function of bacterial proteins in this family was inferred originally from the known activity of eukaryotic homologs. Recently, activity was shown explicitly for the member from Mycoplasma pneumonia. Members of this family from alpha- and gamma-proteobacteria, designated ygfA, are often found in an operon with 6S structural RNA, and show a similar pattern of high expression during stationary phase. The function may be to deplete folate to slow 1-carbon biosynthetic metabolism. [Central intermediary metabolism, One-carbon metabolism].	6.31807e-62
NZ_CP015029.1\|WP_123955656.1\|21396_23073_-\|pilus-assembly-protein	gnl\|CDD\|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	5.70701e-08
NZ_CP015029.1\|WP_123955662.1\|13137_14151_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP015029.1\|WP_123955655.1\|23091_23700_-\|protein-TadF	gnl\|CDD\|374906	pfam16964, TadF, Putative tight adherence pilin protein F. TadF is a family of proteins from the tad locus that is part of the type IV bacterial secretory system.	4.0092e-41
NZ_CP015029.1\|WP_123955661.1\|14450_15053_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	4.7906e-39
NZ_CP015029.1\|WP_123955666.1\|6553_6919_+\|YcfL-family-protein	gnl\|CDD\|176923	cd09030, DUF1425, Putative periplasmic lipoprotein. This bacterial family of proteins contains members described as putative lipoproteins, some are also known as YcfL. The function of this family is unknown. Family members have also been annotated as predicted periplasmic lipoproteins (COG5633), and appear to contain an N-terminal membrane lipoprotein lipid attachment side (pfam08139), which is not included in this alignment model.	3.43098e-20
NZ_CP015029.1\|WP_123955659.1\|15980_18008_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	5.15667e-161
NZ_CP015029.1\|WP_123955668.1\|5648_6095_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	1.01012e-21
NZ_CP015029.1\|WP_123955660.1\|15117_15960_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	3.84973e-112
NZ_CP015029.1\|WP_123955658.1\|18004_18727_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	2.55444e-93
NZ_CP015029.1\|WP_123955663.1\|12786_13080_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.26787e-32
NZ_CP015029.1\|WP_123955667.1\|6182_6551_+\|purine-nucleoside-phosphoramidase	gnl\|CDD\|182648	PRK10687, PRK10687, purine nucleoside phosphoramidase; Provisional.	9.33093e-68
NZ_CP015029.1\|WP_123955672.1\|1715_2564_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|225464	COG2912, COG2912, Uncharacterized conserved protein [Function unknown].	2.60423e-68
NZ_CP015029.1\|WP_123955670.1\|4510_4840_+\|cell-division-protein-ZapA	gnl\|CDD\|225571	COG3027, zapA, Cell division protein ZapA (stimulator of FtsZ polymerization and Z-ring component) [Cell cycle control, cell division, chromosome partitioning].	2.35078e-15
NZ_CP015029.1\|WP_123955657.1\|18735_21192_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.176e-53
NZ_CP015029.1\|WP_123955671.1\|3890_4436_-\|UPF0149-family-protein	gnl\|CDD\|234976	PRK01736, PRK01736, hypothetical protein; Reviewed.	2.22465e-69
NZ_CP015029.1\|WP_123955654.1\|23671_24232_-\|pilus-assembly-protein	gnl\|CDD\|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	3.41245e-07
NZ_CP015029.1\|WP_123955665.1\|7072_7840_+\|phosphotransferase-family-protein	gnl\|CDD\|270700	cd05151, ChoK-like, Choline Kinase and similar proteins. This subfamily is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate and displays negligible activity towards N-methylated derivatives of Etn. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	6.10606e-29
NZ_CP015029.1\|WP_123955664.1\|8054_9248_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0

>NZ_CP015029.1|WP_123955664.1|8054_9248_+|tyrosine--tRNA-ligase
MSQSLETTLAELKRGVEDVYSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKLRQFQQLGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQIFKILDPQKTRIVFNSEWLGELGTEGMIRLASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQGHDSVALHADVELGGTDQTFNLLIGRELQKSVGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVTEAPSEMFGKVMSISDELMWDWYNLLSFRPLDEIAQFKADVANGKNPRDVKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFTFEGEIGLANLLKEAGLVASTSEAIRSVNQGGVKIDGEKVEDSKLVIQAGTTAVYQVGKRKFARVTVK
>NZ_CP015029.1|WP_123955665.1|7072_7840_+|phosphotransferase-family-protein
MPTNPALQWLTHTRQQAIRSVEKLTGLTACSQLVTLENGERYVLRNQTQRASDFGVNYQQESQILATIRPLAMAPNPLYVDAQQSLLSWIDGNVPTEFSPALLQQLAEQLAKLHQFDLQAVSSNENVTILNLTARCEFLWQKLPAQTQVELPFSPPFPQIAPFAQALCHHDLHLGNLVEQGDKLFIIDWEYAAVSDPALELALFLHANPLSETEQAVFFQHYFAKNPLVPTACQRKMTEYQPLIAILNQLWYAFS
>NZ_CP015029.1|WP_123955666.1|6553_6919_+|YcfL-family-protein
MKKLALIAFFGLCLTACSSKPVSYLPTGTQPIVNVEAPLSELLDVNTEPLVFKVKNRTEQPLKVAYKLFWYDKEGVTQTRDPDDRSPWLNFWLEPKANTEVPLTPPTAESVNYRVYLRNAR
>NZ_CP015029.1|WP_123955667.1|6182_6551_+|purine-nucleoside-phosphoramidase
MQTNLTNYEETIFSKIIRKEIPAAIVYQDELVTAFRDISPQAPTHILIVPNKFIPTLNHVSAEDEQALGRLFTVAAKIAKEEGIAEDGYRVIMNCNQHGGQEVFHIHMHLVGGEPLGRMLAK
>NZ_CP015029.1|WP_123955668.1|5648_6095_+|isoprenylcysteine-carboxylmethyltransferase-family-protein
MELKIPPPVVFLICAALIYFSPNFTEPMLILRILAVIIALTAISIDLLGLLAFWQKKTTINPLAPSKTSHLVTHGIYRFTRNPMYLGLACQLTAWTLWLSNLLALLWVWGFILYITRFQIVPEERLLAEKFGAEFKAYQQQVPRWLWR
>NZ_CP015029.1|WP_123955669.1|5076_5649_+|5-formyltetrahydrofolate-cyclo-ligase
MSDIQQIRQQLRTSMRAKRLALSPAQQHFAAKQIIPSAQQLIEHYQAEHIACYLPFDGEISPLALIKMLQAQGKNVYLPVLHPFSAHQLLFLRFDDEKELVPNRFGILEPKLDVQKVLPINALEMIFVPLVACDKQGNRLGMGGGFYDRTLAQSPHLISVGLAHRCQQVERLPLESWDMPLSHLIIGECE
>NZ_CP015029.1|WP_123955670.1|4510_4840_+|cell-division-protein-ZapA
MSKNNIELSLFGQVLRLYCPPEQQAFLLASAQRLEERVAALKEQSGIIQLEKVLSIVALNLNYELEQEQRKNLENKNVLESCIKQLDNSLAKFQSTDVENVVIGQENNE
>NZ_CP015029.1|WP_123955671.1|3890_4436_-|UPF0149-family-protein
MAISATEFQRLIKELQIDYTAAEFHGFLSGLIAGGVQDESWKTLTYQFTNDGHAFSQVPLSKLTELYQQVNDSFDEANTLFSLWIPSEEDGFALADGIAEWTNHFLLGLGLAQPTLQQETDEVGEAIDDLDEIAKLGYDEADSSEELLEAGEEVVEYLRVVTLFLHSHFAKPKTAEKPKVH
>NZ_CP015029.1|WP_123956663.1|2551_3781_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MAGEKTATCSGKIFYELENVPFPQVDGKVQTILDSQNNPLVDITLTDVFFEQFGQVPEAFALAEGEGDFAYWKAAHRQFFNEAIGKISAETDRLPGVENGQITAEFEVVCERFQAVKIHLKTYQQWLDFAEQALLEMGEDDPFLNAKFDANLLLQAVTKRSKSAIFAFSETVLNESELKQLAALLVRRAKGEPMAYILGEKEFWSLPLAVSTATLIPRPDTERLVELALDWANKQSDPAKVLQILDLGTGTGAIALALASELGERAEIVGVDKQPEAVALAERNRQSLGFNNVQFMQSDWFDALKNQQFDLIVSNPPYIDENDENLHVGDVRFEPLSALVAGEQGTADLQQLIENAPLYLRYNGALMLEHGWQQAAWVQQKFKQNQWDNIETAQDYGGNDRVTWAIWTK
>NZ_CP015029.1|WP_123955672.1|1715_2564_-|tetratricopeptide-repeat-protein
MDEIIQPFSLTKKQRDNLQRFLYRELLRLTTMTDDSISEPQIFGLMSALVKKAKYAVNGETDEQRINQLVQFLYQEQGFACHHEEYFYTENLSLHKVLRRKRGMPVSLGAVMLYLAAVLDLPLYPVNFPTQLVIRAEFIDENGRKVVRFINPWDGSDLSFDKMQKWLEGEMGYGTELHREYLRIAEQDELLERLETVFKMALTREGKYPEALRLIEYRLTFTPEDPYEIRDRGMVLASMDCYQAAYDDLSYFIDQCPDDPSAMMLKLEISSLEKQSKASVFH
>NZ_CP015029.1|WP_123955663.1|12786_13080_-|CRISPR-associated-endonuclease-Cas2
MLMLITYDISLDDPEGAARLRRIAKHCLDYGVRVQYSVFECDIAPDQWVRLKAKLLQTYNPETDSLRFYHLGSKWRRKVEHHGAKASLDIFQDTLIL
>NZ_CP015029.1|WP_123955662.1|13137_14151_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRKLQNTLYITTQGSYLHKERETLVVEQDRKKVAQLPVHSIGHIFCFGNVLVSPFLMGFCGENNVNLAFFTENGRFLGRLQGRQSGNVLLRRAQYRISEQNPVPIARHIIAAKIQASKRVLQRRIRNHGEHPDIESAIYALNSSLRHLQTAESVELIRGIEGDAAARYFGVFQHLIRERSGFSFDGRSRRPPRDGINALLSFLYSILGRDISGALQGVGLDPQIGFLHADRPGRDSLAQDLLEEFRAWWVDRMVLSLINLGQIKPTDFTVEASGAVNMKPETRKLLLQTLQAKKQEKIIHPFLQEEVAIGLLPHIQAMLLARHLRGDLAEYPPFLMR
>NZ_CP015029.1|WP_123955661.1|14450_15053_-|CRISPR-associated-protein-Cas4
MQMIPLSALQHYAFCPRQCALIHNEQAWAENYLTAQGQALHERVDSGEPETRKSTRFERTVHVSAEELGISGILDMVEHDLTNGQLKPVEYKRGKPKPEPIDEIQLCAQALCLEAMTGKTVTEGALWYNQTHHRVPIVFTDELRQKTLDTIIAVRNLLDSGITPSPKYSKRCKACSLIEACQPKLMEKDRSRKYVEEIFK
>NZ_CP015029.1|WP_123955660.1|15117_15960_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSLTKKIDFALIISVQNANPNGDPLNGNRPRIDFTGIGEITDVCLKRKIRDRLQDAKENIFVQSDDRKDDGMTSLANRAKDKEVGLGPDAFNPKKSSKDDTAKLACEKWIDVRSFGQVFAFGKTDDASGVSIAIRGPVTIQSAFSIDPVSVTSTQITKSVSGEGDGTKKSSDTMGMKHRVDRGIYVAYGAMSPQLAERTGFSDADAEKIKSVLLKLFEGDASSARPEGSMQVVKLIWWEHNCKSGQYSSAKVHNSLTVNGDGSYSLATLQGLSPQEIDGF
>NZ_CP015029.1|WP_123955659.1|15980_18008_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWMQKLYRTYDAIVSENLADENNPLTPIGHTLQTAHIVIVLDAQGNFKRARLMPPKTTIMLPCTESSDGRSGTKPPPHALADKIQYVAKDYPRYGGTSPLFFDKYLSQLQEWCDSPFSHPKVQSVLNYVRKGHVIADLVNEGIFPTTAEGKVLAKWEEKTEAPEIFSVLPKTKGEIEFGSALICWSVEVASDVESNTWQDESIQQSWIDYLSHNESHKGFCFVQGRESAIAKMHPAKLRHTGDKAKLISSNDSSGYTFRGKFENADEAAAVSAEVSAKAHGALRWLIGRQGIRNGDQVTVAWALNGKQVPQPLEDIYDYIQDIQTNVDELDLSISQENTEVSIETSETQSNYANNLGWQAAEIIKQKMHGLKVELKNHETISLLMLDSATPGRMALTYYQEFLPEHYFAHLDAWIDDFSWYQRYSLEGSDKKKTKRIDWLYLPPSPFTIAQAVYGKALSDTLKKQLYARLLPVIAGGKNIPIPYDLMIQSIERACNPSGCEYWEWQRNIGVACALYKGWRARHYESSIKREFSMNLETENVSRDYLFGRLLAVLESIERRALMIAGENRATNAERYMQRFVSHPLDTWLQLKEKIQPYKERLRNNRSMGFLRNREKEENEIGAALANLSQLGISLKERLNGEFLLGYHSQQMAYRNQFNAAKEDADDSSEIETI
>NZ_CP015029.1|WP_123955658.1|18004_18727_-|type-I-C-CRISPR-associated-protein-Cas5
MKNNRISFRVWGKQALFTDPITKIGGEKFSYQIPTYEAIKGIVKSIYWKPTLIWHIDRIRVMKPIQTQSKSAKPLNWNGGNTLAIYTFLKDVEYQVEAHFEWNENWEELVDDRIEAKHTAIMQRMLERGGRQDIFLGTRDCQGYVEPCEFGRGESVYDDIPNLDFGLMFHSFGYPEETGKHELSSRFWLASMQNGIVTFPSVQSEQLKTRIIRQKMKPEKPFKRHQNLKAVEKEAEEIGL
>NZ_CP015029.1|WP_123955657.1|18735_21192_-|CRISPR-associated-helicase-Cas3'
MSSKYIAHIRKSDSAIQSVETHLFETAEIAKRLAAKIGFDLCGESIGLMHDFGKFSQAFLNYINSSAGLVHPDLDEESDNYCSGKIDHSTAGAQWVYNRLKPFGDAQQIGLLCGQILGLCIASHHGSGLIDCLTPDGDSALFKRFTKEDKCTHLRNCLKNADKAVLEKAESLVNEVLIKQLLKPILPMLKRSDISSKSKMFYLGCFTRFLFSCLIDADRINSADFEHQHQKSLRKLDEKPNWQIAIDTLAHHLSQLPTQYAIDETRQKISQICLSRSTDQQGIYSLTVPTGGGKTLASLRYALHHAQKHNLDRIIYIIPYTSIIDQNAETVRTILGEEWVLEHHSNLNPEKQTWQNKLLSENWDKPIVFTTMVQFLDAWFGSGTRGARHIHPMTNSILIFDEIQTLPVKCVHLFCNTLNWLTQYGGSSAILCTATQPLLGENSLDLFPSFKRTQAQMRGLLKLSPNSEIIGDLPKVNELFTDLFRVNIQFNPKSGGWSVEDAGEFLLEQAEQFSSCLFIVNTKKWAQQLYQYCQQKNLPKESLFHLSTNQCPAHRKVLFETIKQRLKQKLPVICISTQLIEAGVDISMACVIRALAGLDSIAQAAGRCNRHGENRDKGTVWVVNLKNEPLAMLPDIQQGQIQAVRLFEEFANQDILQPEAMKQYFQYYFYQRSDEMVYPIPNSTSGSLLDWLSDNPLNVGKQRHNGKMPLLCQSFKSAGKVFQAIDAPTKAVIVPYGEGKDLISILCGDYNPQIFYQTLSKAQRFSVNVFPNIWEKLEKEKALIPIADTGIYYVEERYYSDEYGLCVDEVGKMSFYEC
>NZ_CP015029.1|WP_123955656.1|21396_23073_-|pilus-assembly-protein
MKKQIFKQSKLSQNLSRFIKKEEGVYSILMAGMGATLLAIIAFAVDGSGVILDQARLSDSLEQASLAVTSENNTYRKDKYQINDPTGKHDSFSQNLRNQRDKELVESYVKAYMPNIKSWTPNDISCKQNLQGANNETIQCRVSGTVVREALLPLTFSNSANSSSSDFSISTGAVAEKSKSAPPLDVMIVADFSGSMSYRLDNPNLLGYASNSKSAILKSVLYDLTDNYLFKEDDSLNRIGFTAFSFGAKVPNGLDESSIDIKTKAILRSAGIQLDKMEDNCVLPYLFETERAFIELDNGQKVEKNVVEFLTDSTPTSRRWETLSGFSPQVSVKKTIKQVESFDGSAKHYSVIFKVQRIPSGNSSYARCVGYNNQKGKNVPGAAYWFDRSKKESFKDFLREIEPEGATLVTSGLLVGTNLMSDKKHHLDPKKVGNTQRIIVILSDGKDQSMVDSSYHQAPPHRKPLEKKFRDLTEEFIEGGLCDVVRARMDGLQSTDYRTYESKLAFIAFGYDPDERNDKAWRKCVGDKNYFIAKTEEDLLDSFKKAFTTEEVGHSLNP
>NZ_CP015029.1|WP_123955655.1|23091_23700_-|protein-TadF
MKETKLKFVKKFLSNMKGAVAVEFMLLLIVLVIMFAFMFDLVLMRSTVGKLERTSYSLLNVVKERTQLYAHTNNEYLSDADITELQTLAANLLYGEGNPSKKKVEVYLEYLELNDPTDPNDRNSRTIKEDFPIVKGSANTCTPLIPVSALTKSSPVSETLRSVPIYQVTVCAEVGSLFKSILVSKKNQSLGLLRASSHGPIR
>NZ_CP015029.1|WP_123955654.1|23671_24232_-|pilus-assembly-protein
MKVEIKNFIKNSKGASTVEFALTIGIFLAVVLSIFELARMSILSAYMDLTISQAVKVTKNTKASNYDYEDEFKKNLDLIVNKIKNDNKTFKFLDMSKQNIIRFEVKYAESISDLVNGNYRDVIDHTDPKNPKKKKNPGKDAALAKYSFQYEYKPMFFWIPNSISTPIFNREVIILQEYERDKIKIR

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Crispr_ID: NZ_CP015029_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015029_2

2101547-2101664

Orphan

Consensus_repeat	Method
TTCTAAATGAGCTGAAATTAAATTAGCT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP015029_2

>merge|NZ_CP015029|2|2101547-2101664|CRISPRCasFinder
TTTTAAGTGAGTTGAACTTAAATCAGATCCTTCTAAATGAGCCTCTCTTAAATCAGCTTCTTCTAAATGAGCTGAAATTAAATTAGCTCTTTCTAAATTAGCCGAACTTAAATCAGCT

>NZ_CP015029|2|2|2101547-2101664|CRISPRCasFinder
TTTTAAGTGAGTTGAACTTAAATCAGAT	CCTTCTAAATGAGCCTC
TCTTAAATCAGCTTCTTCTAAATGAGCT	GAAATTAAATTAGCTCT
TTCTAAATTAGCCGAACTTAAATCAGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015029.1\|WP_123955714.1\|2111616_2112162_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP015029.1\|WP_123955728.1\|2095212_2096604_+\|deoxyguanosinetriphosphate-triphosphohydrolase-family-protein	unknown	unknown	gnl\|CDD\|235403
NZ_CP015029.1\|WP_123955730.1\|2093174_2093750_+\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225916
NZ_CP015029.1\|WP_123955719.1\|2105747_2106623_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|274527
NZ_CP015029.1\|WP_123955715.1\|2110588_2111575_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|180740
NZ_CP015029.1\|WP_123955725.1\|2098339_2101255_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP015029.1\|WP_123955731.1\|2092277_2093123_-\|deoxyribonuclease-IV	unknown	unknown	gnl\|CDD\|179214
NZ_CP015029.1\|WP_123955721.1\|2103377_2104769_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|234981
NZ_CP015029.1\|WP_123955732.1\|2091659_2092163_-\|peptidase-C40	unknown	unknown	gnl\|CDD\|236773
NZ_CP015029.1\|WP_123955729.1\|2093826_2095146_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP015029.1\|WP_123955718.1\|2106746_2108690_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236861
NZ_CP015029.1\|WP_123955716.1\|2109564_2110338_+\|tRNA-cyclic-N6-threonylcarbamoyladenosine(37)-synthase-TcdA	unknown	unknown	gnl\|CDD\|224100
NZ_CP015029.1\|WP_123955734.1\|2090308_2091019_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|214621
NZ_CP015029.1\|WP_123955733.1\|2091187_2091619_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224885
NZ_CP015029.1\|WP_123955722.1\|2102577_2103246_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP015029.1\|WP_123955727.1\|2096612_2097341_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380314
NZ_CP015029.1\|WP_123955720.1\|2104786_2105662_-\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|167337
NZ_CP015029.1\|WP_123955726.1\|2097537_2098212_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|381693
NZ_CP015029.1\|WP_123955723.1\|2101749_2102385_-\|DUF533-domain-containing-protein	unknown	unknown	gnl\|CDD\|225526
NZ_CP015029.1\|WP_123955717.1\|2108749_2109349_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412

Protein	Function_ID	Function_description	E-value
NZ_CP015029.1\|WP_123955714.1\|2111616_2112162_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	1.57214e-124
NZ_CP015029.1\|WP_123955728.1\|2095212_2096604_+\|deoxyguanosinetriphosphate-triphosphohydrolase-family-protein	gnl\|CDD\|235403	PRK05318, PRK05318, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP015029.1\|WP_123955730.1\|2093174_2093750_+\|molecular-chaperone	gnl\|CDD\|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	3.93936e-46
NZ_CP015029.1\|WP_123955719.1\|2105747_2106623_-\|EamA-family-transporter	gnl\|CDD\|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	5.75387e-06
NZ_CP015029.1\|WP_123955715.1\|2110588_2111575_+\|amidohydrolase-family-protein	gnl\|CDD\|180740	PRK06886, PRK06886, hypothetical protein; Validated.	0
NZ_CP015029.1\|WP_123955725.1\|2098339_2101255_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP015029.1\|WP_123955731.1\|2092277_2093123_-\|deoxyribonuclease-IV	gnl\|CDD\|179214	PRK01060, PRK01060, endonuclease IV; Provisional.	1.05569e-167
NZ_CP015029.1\|WP_123955721.1\|2103377_2104769_+\|MATE-family-efflux-transporter	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	3.34286e-170
NZ_CP015029.1\|WP_123955732.1\|2091659_2092163_-\|peptidase-C40	gnl\|CDD\|236773	PRK10838, spr, bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase.	2.06856e-48
NZ_CP015029.1\|WP_123955729.1\|2093826_2095146_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP015029.1\|WP_123955718.1\|2106746_2108690_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236861	PRK11147, PRK11147, ABC transporter ATPase component; Reviewed.	0
NZ_CP015029.1\|WP_123955716.1\|2109564_2110338_+\|tRNA-cyclic-N6-threonylcarbamoyladenosine(37)-synthase-TcdA	gnl\|CDD\|224100	COG1179, COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism].	1.22631e-142
NZ_CP015029.1\|WP_123955734.1\|2090308_2091019_-\|VWA-domain-containing-protein	gnl\|CDD\|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	0.000129842
NZ_CP015029.1\|WP_123955733.1\|2091187_2091619_+\|transcriptional-regulator	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	1.98263e-10
NZ_CP015029.1\|WP_123955722.1\|2102577_2103246_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.89541e-104
NZ_CP015029.1\|WP_123955727.1\|2096612_2097341_+\|nitroreductase-family-protein	gnl\|CDD\|380314	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN. A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	1.54313e-27
NZ_CP015029.1\|WP_123955720.1\|2104786_2105662_-\|NAD(+)-kinase	gnl\|CDD\|167337	PRK02231, ppnK, NAD(+) kinase.	9.35553e-179
NZ_CP015029.1\|WP_123955726.1\|2097537_2098212_+\|transcriptional-regulator	gnl\|CDD\|381693	cd19358, TenA_E_Spr0628-like, TenA_E proteins similar to Streptococcus pneumoniae Spr0628 and Saccharomyces cerevisiae S288C PET18. This family of TenA proteins belongs to the TenA_E class, and lacks the conserved active site Cys residue of the TenA_C class; most have a pair of structurally conserved Glu residues in the active site. TenA_C proteins (EC 3.5.99.2; aminopyrimidine aminohydrolase, also known as thiaminase II) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway; the role of TenA_E proteins is less clear. Arabidopsis thaliana TenA_E (not belonging to this family) hydrolyzes amino-HMP to AMP, and the N-formyl derivative of amino-HMP to amino-HMP. Members of this family include the putative thiaminase Streptococcus pneumoniae Spr0628, and Saccharomyces cerevisiae S288C PET18, a protein of unknown function whose expression is induced in the absence of thiamin. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. Many proteins in this family have yet to be characterized.	2.49847e-79
NZ_CP015029.1\|WP_123955723.1\|2101749_2102385_-\|DUF533-domain-containing-protein	gnl\|CDD\|225526	COG2979, COG2979, Uncharacterized protein conserved in bacteria [Function unknown].	3.07897e-54
NZ_CP015029.1\|WP_123955717.1\|2108749_2109349_-\|hypothetical-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	0.00521649

>NZ_CP015029.1|WP_123955725.1|2098339_2101255_+|RNA-polymerase-associated-protein-RapA
MSFVVGQRWISESENNLGLGIVTAVDNRTVTIDFPASEEQRVYAVAVAPLTRVQFQKGDQVTSVDGWQFEIDDVVENQGVAIYLGKRADTQEQGVLPEMLLDHKVSFSKPQDRLFSAQIDRSDRFALRYRALQHQQAQFQSALRGLRGIRASVIPHQLHIAKEVGQRLAPRVLLADEVGLGKTIEAGMILQQQLFSGRVDRVLVLVPESLQHQWLVEMLRRFSLNFSLFDEERAADFTKKDENDNDVSENPFDSESLVICSIDWLAKSPARAKQVLESQWDMLIVDEAHHLEWNEQTPSVAYQFVEQLAKQIPAILLLTATPEQLGQESHFARLALLDSDRFYDYQAFVAEQKQYQPVADAVATLLNDKPLSHAEQNSISELLAEEDVEPMFRIINSADCSPEQRLEVRQELISELIDRHGTSRVLFRNTRQGVKGFPHRLFNQITLEMPKQYANALKVMGMMGGNKQEDLLYPERLFQRMNPNAAWYEFDPRIEWLITFLKNHRDEKILVICKHSDTAIQLEQVLREKEGIRSAVFHEKMSIVERDKAAAYFAQQEEGAQVLISSSIGSEGRNFQFARHLVLFNLPDNPDLLEQSIGRLDRIGQKFDIQIYVPCFENSAQMVLAEWYHNGLNAFEETCPMGATLFHEFGETLARYLQNPSQNPPLAEFIEQTHKRQQQLKLELEKGRDRLLELNSNGGEQAQQLAQQIAEQDNNPQLVNFALKLFDVIGLEQEDLGEKSIVISPTGHMLVPDFPGISEDGSTVTFDRELALVREDVQFLTWDHPMIRNGIDLITSGDIGKTAISLLINKNLPAGTILLEAIYVVEAQAPKGLQLTRFLPPTPVRLLLDAKGNDLAAQVSFAGLEKQLKPVNKQMANKIAKMARAEIEKLIAAAEAKIAPQAEALIAAAKQNADHTLSAELHRLTSLQAVNKNIRADEVAALERLKTESLEHLNQATWRLDSLRVIISNQA
>NZ_CP015029.1|WP_123955726.1|2097537_2098212_+|transcriptional-regulator
MNFQQLRQQHPDLPFSEQLRLYSDEEWQKIIHHRFVNELGEGTLANQVLSNYLIQDYTFVDSLTRLVCTAIADAPTMEIRHVLANFLTAITSDENTYFIRSFEALGVSESLYLSPKLNDVSLEFQQALSDGSTKGYAYAITTLFVAEWSYHTWAIRLRGKRPRHFYHKEWIALHDNIEFNAFVDWVRKQVDQFASQSEQEQNALAEQFKRLCRLEYQFFDAAYQ
>NZ_CP015029.1|WP_123955727.1|2096612_2097341_+|nitroreductase-family-protein
MALHDLLNYRRAVRYFDAEQPLDNDKVKHCLALATLAPTSSNMQLYECYHITDNTLLDQLATACLGQQAARTAQQMVVFVTRQDLYQQRANAVLEFEIDNIKRHSPPERWENRINGKKAYYAKLMPFVYRRFFGLLGLFRKAIAYTIRLHRPIKTDVSEADIRVTVHKSCALVAQTFMLAMAEQGYDTCPLEGLDSRRVKKILDLPSGAEINMIVSCGVRKAGRGIWGERYRVPFEQIYRQR
>NZ_CP015029.1|WP_123955728.1|2095212_2096604_+|deoxyguanosinetriphosphate-triphosphohydrolase-family-protein
MNSAIWTERFLGDKQRENDHRSPFQRDRGRILHSEAFRCLQAKTQIHAVGEDDFYRTRLTHSLEVAQIGNSLRAKLERDRQGFLQAVRFSDFFANPLFNAESRQSQGGKSDAFYANLVENLTDLLPSRSLIESLCFAHDIGHPPFGHGGEMALNYKMREHGGFEGNAQSFRIVTQLEPYTENAGMNLTRRTLLGIIKYPALIDETAPRSPKIITESRFINLHDVKTSKGLFRDDERFFDWVLAPLSAHDRQLFRAVVASENPELPNKTCYKSLDCSIMELADDIAYGVHDLEDAIVGGMVTPQSWQAAEDALANCSSQWIKTRLPELREKLFSAHRYQRKDVIGALVNHFVTNVQWREVAEFDEPLLRFNAALPDDVQAVLDVLKTFVYQYVICDVKTQRVEYKGQRILMDLFDMLSCDPTRLLPKAVADRWKATEERKRPRIICDYLASMSDGQAFKLYQSL
>NZ_CP015029.1|WP_123955729.1|2093826_2095146_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MALFYSDKSAKKSTKPTACRPFTIQDLDYQGLGVAKVEGKTWFVENALPNEQVEAVVIEEKRQFGRAKAVRFKQKSANRQVPSCAIYGRCGGCQMQHISLEMQRAAKQKALFQRLQRLQDSPIDFQPMIVGRATGYRRRAKLHIGVEKNGVVLGFRQANSQQIVPVSECEMLEPSLSALLPKLQQLLSGWKNKKQLGHLELVRADNGICLLLRHIGPLHQQDSENLRQFAGMENLSLFVMTEKEQVEQWRGEPPYYQIDGLKLAFSIRDFIQVNAELNASMVATALDWLSLTPQDRVLDLFCGMGNFTLPIAKQAAQAVGIEGVAAMVEQATQNAVGNGILNAQFFQTDLDQPFVDQLWAAEKFNKVLLDPARNGAWFALDHLCQLQPERMVYVSCNPATLVRDAEKLIANGYRLTRCAMIDMFPNTAHLESISLFEKV
>NZ_CP015029.1|WP_123955730.1|2093174_2093750_+|molecular-chaperone
MTQTTINDFSLLCRLFGNLFYRQPQDPILAGTFAWLAQGNLRSNWALSTDSQSEQALSSVEKNAHPTQLTPSYQALFSENGAIATTISAYGFSVENFATFRQQRGMPALDNADHVALLLLTASWIEDNLGSTEAQQTLFEQFLLPCLSKFLGQVEAFDNGFYKALAQLTRDALSAMADELEEAVEQGDMEA
>NZ_CP015029.1|WP_123955731.1|2092277_2093123_-|deoxyribonuclease-IV
MKYVGAHVSASGGVENAVLRSVEIGANAFALFTKNQRQWKAPALKAETIEKFKRFCKVHQFSPDQILPHDSYLINLGNPEAENLAKSREAFIDEMQRCDQLGLKLLNFHPGSHLNKISEKDCLARIAESLNMAIDAVPNVIAVIENTAGQGSNLGWRFEHLAEIIEQVENKARVGVCLDTCHLFSAGYDISSFEKSSHVFAEFSKVVGFDYLRGMHLNGSKTPLASRVDRHDILQDGTIGTGVFEFIMQDNRFDGIPMILETIQPENWANEIKFLRSLEQN
>NZ_CP015029.1|WP_123955732.1|2091659_2092163_-|peptidase-C40
MQKSFFTLTKTWCFSLAVFALAACSSTVNASLSTKAAKPNQITHTQSKNSDASKVLSAYRQWAGTRYRLGGTTKAGIDCSAFVKAAMNSAFNLHLPRSTAQQKYSGKAISKKELRPGDLVFFRKNHHVGIYIGGGKFVHASSSRGVITSSLSEKYWARTYTQSRRVL
>NZ_CP015029.1|WP_123955733.1|2091187_2091619_+|transcriptional-regulator
MAHLRSLERERSYQPIPLYRDFNTQRSIKLDLNSLCIRRPTETFFIHVKNPNLIAWGIELDDLLIVEQSEQILINDLFVLEKDGEYKFYQFFNEVNGEKILFSLDVSEPNLRIQEWDEINVAGVITNVVHQMRNRTSPMKYAA
>NZ_CP015029.1|WP_123955734.1|2090308_2091019_-|VWA-domain-containing-protein
MKKFILFCLLFCGVTAKAHEISAPLVDTQLVFILDRSGSMGGLESDTIGGFNAMLEKQKKEKGLAFVTTVLFDHKYELLHNRIPLEKVSPITEKEYFVRGNTALLDAIGKTIVNVKQQQKASEKMKSERVLFVIITDGMENASQEFKLDKVKQLITEQQKKQEWEFLFLGANIDAINTAESFGIDKSRAVEYISDSQGTQMNYKAVNSAVQEVRRGKQLDESWKAEIEADVKERKK
>NZ_CP015029.1|WP_123955723.1|2101749_2102385_-|DUF533-domain-containing-protein
MNFSKLLSTMLDTAKQSAGNMRKPSESTADTITKVGGGAALAGILSMVLGRSGGASLAKMGSLAALGSIAYQAYQTYQKNQATVAEITPNEFEATTHSEEEKASVILRTMIAAALSDGVLDESERAAIEREAGDNAELHQWLAAEVEKPISIAEIARIVGSDVALASQVYLAARVVCQELSRKEIVFLSQLAEALKLDDALVEQLEKQAGF
>NZ_CP015029.1|WP_123955722.1|2102577_2103246_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MALIEYHPPTEPWLDEVYRDNHILVINKPSGLLSVPGNRPEYQDSAMTRVQQKYGFTEPAHRLDMATSGILLFALSKAAEKELKRQFREREPKKHYQALLWGKLGEKVGETGTMNFPLICDWENRPRQKICYERGKQAVTFYEILAHYPNNTTRVKLTPHTGRSHQLRVHSLALGHPILGDKFYANPLARSLAPRLCLHAESLSITHPITGEPMTFSVPPAF
>NZ_CP015029.1|WP_123955721.1|2103377_2104769_+|MATE-family-efflux-transporter
MNLQWHKYPENTKRLFKLSLPILMSQIAASGMGITDVVMAGLVSDADVSAIAVSNSLYFPLFLFVLGVLNAITPTVSYLNGSGQRELIAHQIRQGVWIVLMLSLPLLIVFLNSHFILDFMGTPADFSGKAQQYLTVVSVGLIPALLSVNLRCMNDGLSNPKPAMLITVFGLLMNIPLNYVFIFGKFGMPAMGAVGSGVATAILNWLMFGLMLLYCYTNRSQRDIKLFAKWIEAPNKVTLLKLFKLGTPIGFSIFTEVMLFSASSLVISPLGAQAVASHQIALQTSSLFFMLPMSFAIATTILIGQTLGKKQVEDAKYLSYHAIFSVVMISMIMAVIILLLRDLIPHAFTSEPKSIAIASGLLIFAAVYQIPDAVQVACNGILRGYKFTKPTLLITLICYWLVGMPFGYMLSMTDWIVPPMEAAGFWLMFCICLTLASGLLLHQMRKIQSLPAQTQILRLEAIK
>NZ_CP015029.1|WP_123955720.1|2104786_2105662_-|NAD(+)-kinase
MRPFKNIAIVGKPRHDIAFETHIAVYNWLKDRQYNLLVETNIAQQLNLPNGKTIAEIGEQADLVIVIGGDGNMLGMARQLAKYEVPLIGINRGNLGFLTDIAPQTAFEQLYSTLERGEFIIEERFLLEARIEQNGKVIELSNALNEVVVHSSQIARTIEFEVSIDGKFAFSQRSDGLIIATPTGSTAYSLSAGGPILTPNLNAVVLVPMNPHSLASRPLVIDGESVVSMRFAQYNQPNLVISCDSQRLLPFSSDERVIVQKSPDTLKLLHLKDYNYFTVLGSKLGWLSKLF
>NZ_CP015029.1|WP_123955719.1|2105747_2106623_-|EamA-family-transporter
MWIWFTLLAAVAQAGRNAFQKQLSQDVPVLGVTLARFLYAVPLAVGYLCVLYQQDTSLEVPDFPLLFYVYVIGASLAQILATSLMVKLFHLKNYAIGVGLAKSEAVLAAILGVCFFGVDIHFIGWIGVLLGGVAIFLMTGSGNLRQLSWKTLFLGIGSGLSFALTSLWVREASLQLHSHYLISAAWVLASVISFEALLLVGYLAWRDKQTLVKLWQRPKLVILTSLFSFLGSFGWFNAMSLNHVAFVKTLGQVEIFLILMISSFIFKERLKLQDFVGLILVVVAAILVVWQ
>NZ_CP015029.1|WP_123955718.1|2106746_2108690_+|ABC-transporter-ATP-binding-protein
MALINLSNAYLGFGDHPLLDHTELHIEQGERVCLVGRNGAGKSTLMKVLAGEVQLDDGKLIFEKDIVVTRLEQDPPRHIEDTVFDYVAEGIAHLADLLKQYHQISQRMQTDYSETLMSQLAQVQAQLEHANGWQFENRIQDTLKLLELDPNKRLCELSGGWVRRAALARALVADPDVLLLDEPTNHLDVDTIAWLENLLLDFKGSIIFISHDRAFIRKMATRIVDLDRGKLVSYPSNYDVYLETKAEDLRVEALQNELFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALREERRNRRDVLGTAKIQLDQTARSGKIVFEVENASVEVAGKTLLKNFSTTILRGDKIALIGPNGIGKTTLIKLLLGEIQATSGSVRCGTKLEVAYFDQYRAELDPEKTVMDNVADGKQDVEVNGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDVETLELLEEMLTDYQGTLIIVSHDRQFIDNTVTECFIFEGNGVVNKYVGGYHDAKQQQANYHATLDNKRSDSGKNLQKSAEKSPLVEPEKPKAEPAKKVKLSYKDQRELETLPEKMEQLEAEIEALQTEVNSAEFFSKEPSYTQTQLQKLADTELALEQAFERWEELENIKNGNV
>NZ_CP015029.1|WP_123955717.1|2108749_2109349_-|hypothetical-protein
MKEILSNILDSASKQLDKAKQALDESIEKGKDAAESMQDKASEVKADVESKATELKAAVADKVDDVQDKAAELKAEAEVKWEKMKDSAAETVDEAKAKAEELKEDAAVKVAQFQNAASEKFDETKDKATELKDEAAAKFEDAKEIAADKYAELKEELSALGDSLNEKVDQAKVAMADTLDALGKAMQEKAAEWKSEAEK
>NZ_CP015029.1|WP_123955716.1|2109564_2110338_+|tRNA-cyclic-N6-threonylcarbamoyladenosine(37)-synthase-TcdA
MARIDNYEYRFGGIGRLYTPEGLAKLRESHICVIGIGGVGSWAVEALARSGVGKLTLIDMDDICVTNINRQIHAMSGEIGKLKTEVMQERIAKINPECEVQIIDDFLTTENLNDYLLRGYDYVIDAIDSVKVKAALIAFCKRNKIKIITTGGAGGQTDPTQIQIADLSKTIQDPLASKVRSLLRKEYNFSQNPKRKFGVDCVFSTQPLIFPTMSEGCEVSATMNCANGFGAATMVTATFGFFAVSRVIAKLLANPTA
>NZ_CP015029.1|WP_123955715.1|2110588_2111575_+|amidohydrolase-family-protein
MSQLIRTLKSHIRDEVIKKGGWVNSHAHADRAFTMTPEKIKIYQEANLQQKWDLVDEVKRNSTVEDYYRRFSQAIELMISQGVTAFGTFVDIDQVCEDRAILAAHKAREVYKNDIILKFANQTLKGVIEPNARKWFDIGSEMVDMIGGLPYRDELDYGKGLEAMDILMETAKSQGKMLHVHVDQFNSQKEKETEQLCDKSLEHGMQGRVVAIHGISIGAHPREYREMLYKKMKAVDMMMIACPMAWIDSPRKDEVLPFHNALTPADEMIPEGITVAIGTDNICDYMVPLCEGDMWQELSLLSAGCRFTNLDEMANIASINGRKVLGLI
>NZ_CP015029.1|WP_123955714.1|2111616_2112162_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MQNLTITDGWLNQRIVLSPHFNARPNADDISLLVIHYISLPPEEFGGDFIDRFFQGTLDPTIHPYFEEIKELRVSAHCLINRQGEITQYVNFNQMAWHAGVSNFQGREKCNEFSIGIELEGSNNQPFTAAQYQTLAQLTQQIMQCYPQITADRIVGHSDIAPGRKIDPGPYFEWDYYRSLL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP015029_1	1.40\|11995\|33\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	11995-12027	33	NZ_CP015029.1	1514564-1514596	0	1.0
NZ_CP015029_1	1.48\|12527\|36\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	12527-12562	36	NZ_CP015029.1	448476-448511	0	1.0

1. spacer 1.40|11995|33|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to position: 1514564-1514596, mismatch: 0, identity: 1.0

acctgaccgaacatctgaatatctttggcattg	CRISPR spacer
acctgaccgaacatctgaatatctttggcattg	Protospacer
*********************************

2. spacer 1.48|12527|36|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to position: 448476-448511, mismatch: 0, identity: 1.0

ctgtgcaagcggtgcattttatgcagctttcaaaac	CRISPR spacer
ctgtgcaagcggtgcattttatgcagctttcaaaac	Protospacer
************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015029_1	1.42\|12127\|36\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	12127-12162	36	GQ866234	Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S25, complete sequence	5677-5712	2	0.944
NZ_CP015029_1	1.17\|10451\|34\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	10451-10484	34	NC_011409	Haemophilus influenzae plasmid ICEhin1056, complete sequence	13527-13560	7	0.794
NZ_CP015029_1	1.23\|10853\|34\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	10853-10886	34	NC_012226	Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence	30648-30681	7	0.794
NZ_CP015029_1	1.23\|10853\|34\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	10853-10886	34	NZ_CP016085	Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence	12708-12741	7	0.794
NZ_CP015029_1	1.23\|10853\|34\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	10853-10886	34	AP013581	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C23-MedDCM-OCT-S23-C56, * SEQUENCING IN PROGRESS *	9680-9713	8	0.765
NZ_CP015029_1	1.23\|10853\|34\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	10853-10886	34	MT701590	Klebsiella phage Miami, complete genome	167372-167405	9	0.735
NZ_CP015029_1	1.8\|9849\|34\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	9849-9882	34	NC_007616	Nitrosospira multiformis ATCC 25196 plasmid 2, complete sequence	1362-1395	10	0.706
NZ_CP015029_1	1.41\|12060\|35\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	12060-12094	35	NC_019924	Clostridium phage phi8074-B1, complete genome	18714-18748	10	0.714
NZ_CP015029_1	1.14\|10251\|34\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	10251-10284	34	MK448706	Streptococcus phage Javan221, complete genome	6505-6538	11	0.676
NZ_CP015029_1	1.4\|9584\|34\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	9584-9617	34	NC_023286	Streptomyces sp. F12 plasmid pFRL6, complete sequence	144059-144092	12	0.647

1. spacer 1.42|12127|36|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to GQ866234 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S25, complete sequence) position: , mismatch: 2, identity: 0.944

cctagaatagccgtatgtcctaagtgcatatcgcca	CRISPR spacer
cctaaaatagccgtatgccctaagtgcatatcgcca	Protospacer
****.************.******************

2. spacer 1.17|10451|34|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to NC_011409 (Haemophilus influenzae plasmid ICEhin1056, complete sequence) position: , mismatch: 7, identity: 0.794

attgagttatgcgaaaaaggcagtcaatgagcta	CRISPR spacer
tctcacttatgctaaaaaagcagtcaatgagctt	Protospacer
 .* * ****** *****.**************

3. spacer 1.23|10853|34|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to NC_012226 (Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence) position: , mismatch: 7, identity: 0.794

ttcttaaaaaaataaaggaaatatattcctaaat-	CRISPR spacer
atgataaaaaaataaatgaaatat-tttcaaaata	Protospacer
 *  ************ ******* **.* ****

4. spacer 1.23|10853|34|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016085 (Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence) position: , mismatch: 7, identity: 0.794

ttcttaaaaaaataaaggaaatatattcctaaat-	CRISPR spacer
atgataaaaaaataaatgaaatat-tttcaaaata	Protospacer
 *  ************ ******* **.* ****

5. spacer 1.23|10853|34|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to AP013581 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C23-MedDCM-OCT-S23-C56, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.765

ttcttaaaaaaataaaggaaatatattcctaaat	CRISPR spacer
atctaaaaaaaataaaggaaaaataaatttaatt	Protospacer
 *** **************** ***  ..*** *

6. spacer 1.23|10853|34|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to MT701590 (Klebsiella phage Miami, complete genome) position: , mismatch: 9, identity: 0.735

ttcttaaaaaaataaaggaaatatattcctaaat	CRISPR spacer
gccgtaaaaaaataacagaaatatattcctccta	Protospacer
 .* *********** .*************

7. spacer 1.8|9849|34|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to NC_007616 (Nitrosospira multiformis ATCC 25196 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.706

ctaccaccccgaagatattaagctgattaacgta	CRISPR spacer
gatccacccagaaaatattaagctgatagaaaga	Protospacer
   ****** ***.************* .* . *

8. spacer 1.41|12060|35|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to NC_019924 (Clostridium phage phi8074-B1, complete genome) position: , mismatch: 10, identity: 0.714

tagttgaccacattgaggataaactacagtcattt	CRISPR spacer
aagttgaccacattgatgataaaatagatagagca	Protospacer
 *************** ****** ** *   * .

9. spacer 1.14|10251|34|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to MK448706 (Streptococcus phage Javan221, complete genome) position: , mismatch: 11, identity: 0.676

caccaccaaactctatttttgtgatctgtgtcga	CRISPR spacer
actcttgtaactctacttttgtgaactgtgtctt	Protospacer
  .* .  *******.******** *******

10. spacer 1.4|9584|34|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 12, identity: 0.647

tagccccgctcgggtgcgaacaggggcagtggtt	CRISPR spacer
cccaaccgctcggttgcgaacagcggcaggtagg	Protospacer
.    ******** ********* *****  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

360272 : 440463

uncultured_Caudovirales_phage(21.74%)

tRNA,head,portal,transposase,tail,capsid,terminase,integrase,protease

attL 355974:355992|attR 417465:417483

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
355974:355992	attL	NA	NA	NA	NA
WP_123956957.1\|360272_361178_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_123957083.1\|361273_361591_+	hypothetical protein	A0A2D2W4Q6	Escherichia_phage	2.2e-07	33.7
WP_123956958.1\|361617_361878_+	hypothetical protein	NA	NA	NA	NA
WP_123956959.1\|361887_362508_+	glutathione S-transferase	NA	NA	NA	NA
WP_123956960.1\|362550_362913_+	DUF559 domain-containing protein	NA	NA	NA	NA
WP_165894248.1\|363254_363416_+	hypothetical protein	NA	NA	NA	NA
WP_123956961.1\|363447_365511_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_123956962.1\|365576_366011_+	sel1 repeat family protein	NA	NA	NA	NA
WP_123956963.1\|366039_366330_+	DUF5377 family protein	NA	NA	NA	NA
WP_123956964.1\|366331_367237_+	tyrosine recombinase XerC	A0A2R2ZHE2	Clostridioides_phage	1.5e-16	25.9
WP_123956965.1\|367258_368653_-	class II fumarate hydratase	NA	NA	NA	NA
WP_123956966.1\|368834_369374_+	serine hydrolase family protein	NA	NA	NA	NA
WP_123956967.1\|369501_370383_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_165894249.1\|370406_370706_+	hypothetical protein	NA	NA	NA	NA
WP_123956968.1\|370860_372306_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_165894241.1\|372503_375290_+	sel1 repeat family protein	NA	NA	NA	NA
WP_123956970.1\|375332_375950_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_123956971.1\|376056_376767_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA
WP_123956972.1\|376855_377059_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_123956973.1\|377219_377741_+\|protease	ATP-dependent protease subunit HslV	A0A1B4XX93	Tenacibaculum_phage	7.4e-05	25.0
WP_123956974.1\|377915_379238_+	HslU--HslV peptidase ATPase subunit	A0A173GFL6	Erwinia_phage	4.6e-43	28.4
WP_123956975.1\|379300_380125_-	diaminopimelate epimerase	NA	NA	NA	NA
WP_123956976.1\|380296_381619_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_123956977.1\|381705_382524_+	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	S4TT53	Salmonella_phage	3.9e-08	44.6
WP_123956978.1\|382928_384155_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	4.3e-88	43.6
WP_123956979.1\|384498_384936_+\|tail	phage tail protein	NA	NA	NA	NA
WP_123956980.1\|384939_386121_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	5.2e-139	68.0
WP_123956981.1\|386178_386757_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	9.6e-54	59.2
WP_123956982.1\|386757_387969_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	6.7e-142	61.0
WP_123956983.1\|387952_388300_+\|head	phage head closure protein	Q3HQT3	Burkholderia_phage	9.0e-07	30.6
WP_123956984.1\|388292_388604_+\|head,tail	phage gp6-like head-tail connector protein	A0A2D1GNK0	Pseudomonas_phage	7.0e-11	39.0
WP_123956985.1\|388614_388971_+	HNH endonuclease	NA	NA	NA	NA
WP_123956986.1\|389307_389667_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	7.0e-39	66.4
WP_123956987.1\|389663_391334_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	5.8e-237	68.6
WP_123956988.1\|391410_391665_+	hypothetical protein	NA	NA	NA	NA
WP_123956989.1\|391683_392349_+	hypothetical protein	NA	NA	NA	NA
WP_123956990.1\|392348_392555_+	hypothetical protein	NA	NA	NA	NA
WP_165894250.1\|392650_393499_+\|transposase	transposase	A0A0R6PHP9	Moraxella_phage	1.5e-63	44.2
WP_123956992.1\|393510_394506_+	hypothetical protein	NA	NA	NA	NA
WP_123956993.1\|394652_394874_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_123956994.1\|394873_395221_+	hypothetical protein	NA	NA	NA	NA
WP_165894251.1\|395262_395415_+	hypothetical protein	NA	NA	NA	NA
WP_123956995.1\|395479_396172_+	hypothetical protein	NA	NA	NA	NA
WP_123956996.1\|396164_396404_+	hypothetical protein	NA	NA	NA	NA
WP_123956997.1\|396387_396594_+	hypothetical protein	NA	NA	NA	NA
WP_165894252.1\|396607_396865_+	hypothetical protein	NA	NA	NA	NA
WP_123956999.1\|396857_397289_+	hypothetical protein	NA	NA	NA	NA
WP_123957000.1\|397272_399102_+	hypothetical protein	Q7M2A8	Enterobacteria_phage	2.0e-68	36.3
WP_123957001.1\|399602_400550_+	hypothetical protein	NA	NA	NA	NA
WP_123957002.1\|400675_403282_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	2.5e-29	21.4
WP_123957003.1\|403348_404254_-	hypothetical protein	A0A2L1IV32	Escherichia_phage	3.4e-21	71.8
WP_123957004.1\|404435_408716_-	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	1.2e-68	26.7
WP_123957005.1\|408904_412933_-	DNA-directed RNA polymerase subunit beta	A0A2P0VP65	Tetraselmis_virus	1.4e-21	28.7
WP_123957006.1\|413427_413796_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_123957007.1\|413853_414345_-	50S ribosomal protein L10	NA	NA	NA	NA
WP_123957008.1\|414626_416189_-	SAM-dependent DNA methyltransferase	A0A142K7G3	Mycobacterium_phage	3.7e-15	28.9
WP_123957009.1\|416236_417328_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_123957010.1\|421079_421769_-	50S ribosomal protein L1	NA	NA	NA	NA
417465:417483	attR	NA	NA	NA	NA
WP_123957011.1\|421773_422202_-	50S ribosomal protein L11	NA	NA	NA	NA
WP_123957012.1\|422436_423009_-	transcription termination/antitermination protein NusG	A0A291AUS6	Sinorhizobium_phage	7.1e-09	27.3
WP_123957013.1\|423010_423421_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_123957014.1\|423800_424310_+	hypothetical protein	NA	NA	NA	NA
WP_123957015.1\|424364_425819_-	molybdate ABC transporter ATP-binding protein ModF	A0A2R8FG22	Brazilian_cedratvirus	8.7e-11	29.8
WP_123957016.1\|425829_426702_-	VirK/YbjX family protein	NA	NA	NA	NA
WP_123957017.1\|426830_427673_-	patatin family protein	NA	NA	NA	NA
WP_123957084.1\|427673_428117_-	FMN-binding protein MioC	NA	NA	NA	NA
WP_123957018.1\|428295_429693_+	signal recognition particle protein	NA	NA	NA	NA
WP_123957085.1\|429759_430788_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_123957019.1\|430843_431518_-	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_165894253.1\|431516_431774_+	hypothetical protein	NA	NA	NA	NA
WP_123957021.1\|431717_432503_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_123957022.1\|432512_433307_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_123957023.1\|433299_433881_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
WP_123957024.1\|434452_435646_-	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	1.9e-32	30.5
WP_123957025.1\|435832_437182_-	GntP family permease	NA	NA	NA	NA
WP_123957026.1\|437365_437881_+	gluconokinase	NA	NA	NA	NA
WP_123957027.1\|437877_438879_-	gluconate operon transcriptional repressor GntR	NA	NA	NA	NA
WP_123957028.1\|439062_440463_+\|tRNA	L-seryl-tRNA(Sec) selenium transferase	NA	NA	NA	NA

DBSCAN-SWA_2

1169348 : 1178183

Faustovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123956550.1\|1169348_1170569_+	IscS subfamily cysteine desulfurase	A0A0H3TPH2	Faustovirus	2.7e-29	30.2
WP_123956548.1\|1170683_1171067_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	3.2e-50	76.6
WP_123956546.1\|1171191_1171515_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	2.0e-24	49.5
WP_123956545.1\|1171525_1172047_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
WP_123956543.1\|1172059_1172692_+	DUF2625 family protein	NA	NA	NA	NA
WP_123956541.1\|1172810_1174667_+	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.1e-108	43.0
WP_123956539.1\|1174676_1175018_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_123956537.1\|1175017_1175212_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_123956535.1\|1175318_1175861_-	DUF924 domain-containing protein	NA	NA	NA	NA
WP_123956533.1\|1175857_1177105_-	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	6.3e-95	51.2
WP_123956532.1\|1177274_1178183_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	3.9e-70	48.2

DBSCAN-SWA_3

1280967 : 1289584

Stx_converting_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123956419.1\|1280967_1281306_-	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	7.6e-19	48.2
WP_123956418.1\|1281444_1282083_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	9.0e-29	37.0
WP_123956417.1\|1282188_1283220_-	phosphoribosylformylglycinamidine cyclo-ligase	M4QRQ6	Synechococcus_phage	9.0e-71	43.0
WP_123956416.1\|1283433_1283883_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA
WP_123956415.1\|1284113_1285652_+	polynucleotide adenylyltransferase PcnB	G3MAR3	Bacillus_virus	3.1e-27	38.5
WP_123956414.1\|1285651_1286125_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	S4VNV0	Pandoravirus	7.4e-12	35.4
WP_123956413.1\|1286161_1287247_-	metallophosphoesterase	NA	NA	NA	NA
WP_123956412.1\|1287246_1287885_-	hypothetical protein	NA	NA	NA	NA
WP_123956411.1\|1288135_1289584_-	catalase	A0A2K9L0T1	Tupanvirus	1.3e-91	45.3

DBSCAN-SWA_4

1470722 : 1564517

Mannheimia_phage(30.0%)

tRNA,head,portal,tail,capsid,terminase,integrase,protease

attL 1480037:1480055|attR 1545746:1545764

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123956255.1\|1470722_1472609_-\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
WP_123956254.1\|1472608_1473097_-	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_123956253.1\|1473292_1473772_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_123956252.1\|1473805_1474258_-	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA
WP_123956251.1\|1474257_1474503_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
WP_123956250.1\|1474641_1475499_+	phospholipase	NA	NA	NA	NA
WP_123956249.1\|1475546_1476026_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_123956248.1\|1476128_1477151_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_123956247.1\|1477398_1477806_+	DUF423 domain-containing protein	NA	NA	NA	NA
WP_123956246.1\|1477798_1478887_+	23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM	NA	NA	NA	NA
WP_123956245.1\|1478966_1479935_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
1480037:1480055	attL	NA	NA	NA	NA
WP_123956244.1\|1480086_1480899_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_123956243.1\|1480936_1482043_+	methionine biosynthesis PLP-dependent protein	A0A1V0SL56	Klosneuvirus	9.8e-15	25.1
WP_123956242.1\|1482095_1482497_+	nucleotidyltransferase	NA	NA	NA	NA
WP_123956241.1\|1482496_1482799_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_123956240.1\|1482896_1484228_+	L-cystine transporter	NA	NA	NA	NA
WP_123956239.1\|1484412_1485444_-\|integrase	tyrosine-type recombinase/integrase	A0A0M3LS39	Mannheimia_phage	3.4e-102	55.2
WP_123956238.1\|1485455_1485701_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_123956237.1\|1485933_1486737_-	YfdQ family protein	A0A2R2Z323	Escherichia_phage	6.4e-48	41.0
WP_123956236.1\|1486769_1487138_-	hypothetical protein	U5P4J6	Shigella_phage	6.8e-21	50.0
WP_123956235.1\|1487176_1487374_-	hypothetical protein	NA	NA	NA	NA
WP_123956234.1\|1487714_1488536_-	DNA adenine methylase	B0ZSH4	Halomonas_phage	1.4e-10	24.5
WP_123956233.1\|1488572_1489955_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_123956232.1\|1490031_1490685_-	helix-turn-helix domain-containing protein	A0A0M3LSL8	Mannheimia_phage	1.8e-45	54.5
WP_123956231.1\|1490813_1491029_+	helix-turn-helix domain-containing protein	A0A0R6PH31	Moraxella_phage	2.7e-14	50.7
WP_123956230.1\|1491070_1491850_+	Rha family transcriptional regulator	A0A2H4J5H6	uncultured_Caudovirales_phage	4.2e-28	40.5
WP_123956229.1\|1491846_1492920_+	hypothetical protein	A0A1B0VME0	Pseudomonas_phage	1.9e-07	27.6
WP_123956228.1\|1492916_1493414_+	adenine methyltransferase	Q7Y5V8	Haemophilus_phage	3.5e-73	77.6
WP_123956227.1\|1493395_1493605_+	hypothetical protein	NA	NA	NA	NA
WP_123956226.1\|1493597_1494620_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	4.6e-51	35.1
WP_123956225.1\|1494612_1494972_+	RusA family crossover junction endodeoxyribonuclease	A0A0M3LPZ2	Mannheimia_phage	2.8e-19	44.3
WP_123956224.1\|1494961_1495348_+	antitermination protein	A0A0M3LR87	Mannheimia_phage	2.1e-09	30.5
WP_123956223.1\|1495470_1495806_+	hypothetical protein	NA	NA	NA	NA
WP_123956222.1\|1495816_1496368_+	hypothetical protein	NA	NA	NA	NA
WP_123956221.1\|1496723_1497371_+	hypothetical protein	Q7Y5V4	Haemophilus_phage	9.4e-34	59.8
WP_123956220.1\|1497584_1498742_+	hypothetical protein	NA	NA	NA	NA
WP_123956219.1\|1498726_1499095_-	hypothetical protein	NA	NA	NA	NA
WP_123956709.1\|1499211_1499442_+	hypothetical protein	NA	NA	NA	NA
WP_123956218.1\|1499425_1499965_+	lysozyme	Q19UR6	Mannheimia_phage	1.3e-49	54.9
WP_165894266.1\|1499940_1500273_+	DUF2570 family protein	NA	NA	NA	NA
WP_123956215.1\|1500758_1501148_+	hypothetical protein	NA	NA	NA	NA
WP_123956214.1\|1501128_1501479_+	HNH endonuclease	A0A1P8DTD1	Proteus_phage	6.9e-39	63.8
WP_123956213.1\|1501617_1502103_+\|terminase	phage terminase small subunit P27 family	A0A2D1GNP3	Pseudomonas_phage	5.2e-21	39.1
WP_123956212.1\|1502099_1503803_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	7.5e-240	68.5
WP_165894267.1\|1503847_1504000_+	hypothetical protein	NA	NA	NA	NA
WP_123956211.1\|1503996_1505214_+\|portal	phage portal protein	A0A1W6JP33	Morganella_phage	3.2e-144	59.8
WP_123956210.1\|1505206_1505806_+\|head,protease	HK97 family phage prohead protease	A0A1W6JP53	Morganella_phage	2.3e-79	74.0
WP_123956209.1\|1505898_1507095_+\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	3.1e-139	62.1
WP_123956208.1\|1507133_1507454_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	1.5e-08	35.1
WP_123956207.1\|1507493_1507820_+\|head	phage head closure protein	A0A1P8DTK6	Proteus_phage	1.9e-14	42.7
WP_123956206.1\|1507809_1508283_+	HK97 gp10 family phage protein	C7BGH3	Burkholderia_phage	9.7e-12	35.3
WP_123956205.1\|1508282_1508630_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_123956204.1\|1508632_1509277_+	hypothetical protein	NA	NA	NA	NA
WP_123956203.1\|1509384_1509786_+	hypothetical protein	NA	NA	NA	NA
WP_123956202.1\|1509830_1510058_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_123956201.1\|1510577_1510931_+	hypothetical protein	NA	NA	NA	NA
WP_123956200.1\|1511040_1511316_+	Killer protein	A0A0M3LQB1	Mannheimia_phage	2.1e-35	72.5
WP_123956199.1\|1511325_1511619_+	HigA family addiction module antidote protein	A0A0M3LPV0	Mannheimia_phage	2.5e-34	70.7
WP_123956198.1\|1511714_1512032_+	hypothetical protein	NA	NA	NA	NA
WP_123956197.1\|1512107_1515638_+\|tail	phage tail tape measure protein	Q6JIL8	Burkholderia_virus	6.9e-38	38.3
WP_123956196.1\|1515702_1516035_+\|tail	phage tail protein	Q8W6T5	Burkholderia_virus	6.1e-05	34.1
WP_123956195.1\|1516034_1516748_+\|tail	phage minor tail protein L	A0A0M3LSQ5	Mannheimia_phage	7.6e-85	61.8
WP_123956194.1\|1516752_1517514_+	C40 family peptidase	A0A0M3LQI5	Mannheimia_phage	6.2e-77	57.6
WP_123956193.1\|1517450_1518098_+\|tail	tail assembly protein	A0A0M3LQ39	Mannheimia_phage	2.2e-51	56.3
WP_123956192.1\|1518100_1522384_+	host specificity protein J	A0A0M3LQ61	Mannheimia_phage	5.2e-306	58.6
WP_165894268.1\|1522398_1522560_+	hypothetical protein	NA	NA	NA	NA
WP_123956191.1\|1522623_1522914_+	hypothetical protein	A0A0M3LSV5	Mannheimia_phage	2.2e-19	46.7
WP_123956190.1\|1523174_1523285_+	Com family DNA-binding transcriptional regulator	F6MIM1	Haemophilus_phage	2.8e-07	75.7
WP_123956189.1\|1523337_1524180_+	hypothetical protein	F6MIM2	Haemophilus_phage	1.2e-126	75.2
WP_123956188.1\|1524583_1525285_+	toxin	NA	NA	NA	NA
WP_123956187.1\|1525293_1526133_+	cytolethal distending toxin subunit B family protein	A5LH53	Enterobacteria_phage	3.6e-70	51.3
WP_123956186.1\|1526141_1526666_+	cytolethal distending toxin subunit A	NA	NA	NA	NA
WP_123956185.1\|1526785_1528189_-\|tRNA	asparagine--tRNA ligase	A0A1V0SDB6	Indivirus	8.2e-83	37.0
WP_123956184.1\|1528346_1529543_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_123956183.1\|1529752_1530664_+	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA
WP_123956182.1\|1530663_1531974_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_123956181.1\|1532050_1536988_-	hypothetical protein	NA	NA	NA	NA
WP_123956180.1\|1537355_1538237_-	methylenetetrahydrofolate reductase	NA	NA	NA	NA
WP_123956179.1\|1538617_1539868_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	8.5e-07	53.7
WP_123956178.1\|1540071_1542675_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_123956177.1\|1542904_1544188_+	citrate synthase	NA	NA	NA	NA
WP_123956176.1\|1544266_1544836_-	DUF1439 domain-containing protein	NA	NA	NA	NA
WP_123956175.1\|1545122_1545743_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_123956174.1\|1545793_1546102_+	trp operon repressor	NA	NA	NA	NA
1545746:1545764	attR	NA	NA	NA	NA
WP_123956173.1\|1546088_1546856_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA
WP_123956172.1\|1546866_1547784_+	RimK family alpha-L-glutamate ligase	NA	NA	NA	NA
WP_123956171.1\|1547866_1549198_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_123956170.1\|1549213_1550152_+	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_123956169.1\|1550201_1550927_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_123956168.1\|1550926_1555387_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_123956167.1\|1555449_1556532_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	4.0e-85	45.5
WP_123956166.1\|1556599_1557361_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_123956165.1\|1557383_1558478_+	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_123956164.1\|1558511_1559240_-	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
WP_123956163.1\|1559246_1559624_-	thioredoxin family protein	NA	NA	NA	NA
WP_123956162.1\|1559782_1561075_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_123956161.1\|1561289_1561715_+	universal stress protein UspA	NA	NA	NA	NA
WP_123956160.1\|1561892_1564517_+\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	1.9e-80	38.7

DBSCAN-SWA_5

2086893 : 2095146

Serratia_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123955736.1\|2086893_2088912_+	NAD-dependent DNA ligase LigA	A0A289ZTZ3	Serratia_phage	1.6e-132	47.7
WP_123955735.1\|2088956_2090246_+	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	3.0e-31	32.8
WP_123955734.1\|2090308_2091019_-	VWA domain-containing protein	A0A292GAU5	Xanthomonas_phage	3.9e-33	40.9
WP_123955733.1\|2091187_2091619_+	transcriptional regulator	NA	NA	NA	NA
WP_123955732.1\|2091659_2092163_-	peptidase C40	S5MM68	Bacillus_phage	2.7e-12	37.2
WP_123955731.1\|2092277_2093123_-	deoxyribonuclease IV	M1PMK4	Moumouvirus	1.7e-27	31.1
WP_123955730.1\|2093174_2093750_+	molecular chaperone	NA	NA	NA	NA
WP_123955729.1\|2093826_2095146_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	9.2e-36	27.2

Anti-CRISPR protein detection

Acr_ID: NZ_CP015029.1|WP_123956190.1|1523174_1523285_+|Com-family-DNA-binding-transcriptional-regulator

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP015029.1|WP_123956190.1|1523174_1523285_+|Com-family-DNA-binding-transcriptional-regulator

1523174_1523285_+

36 aa aa

1470722-1564517

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP015029_1	TypeI	1.40\|11995\|33\|NZ_CP015029\|CRISPRCasFinder,CRT,PILER-CR	11995-12027	33	1514596-1514564	0

1. spacer 1.40|11995|33|NZ_CP015029|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015029 position: 1514596-1514564, mismatch: 0

acctgaccgaacatctgaatatctttggcattg	CRISPR spacer
acctgaccgaacatctgaatatctttggcattg	Protospacer
*********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015029

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information