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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP049979 Escherichia coli strain IBS28 chromosome, complete genome 4 crisprs csa3,PD-DExK,cas3,DEDDh,DinG,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e 0 8 6 0

Results visualization

1. NZ_CP049979
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049979_1 1054614-1054731 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049979_2 2693218-2693309 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049979_3 4503318-4504018 TypeI-E I-E
11 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049979_4 4519520-4520219 TypeI-E I-E
11 spacers
cas3,cas8e,cse2gr11,cas7

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP049979_2 2.1|2693244|40|NZ_CP049979|CRISPRCasFinder 2693244-2693283 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP019314 Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence 71972-72003 6 0.812
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 66681-66712 7 0.781
NZ_CP049979_4 4.5|4519793|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR 4519793-4519824 32 NC_021289 Burkholderia insecticola plasmid p1, complete sequence 555773-555804 7 0.781
NZ_CP049979_3 3.7|4503714|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503714-4503745 32 AP014927 Ralstonia phage RSF1 DNA, complete genome 171005-171036 9 0.719
NZ_CP049979_3 3.9|4503836|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503836-4503867 32 NZ_CP033139 Vibrio owensii strain 1700302 plasmid pVOWZ1, complete sequence 115828-115859 9 0.719
NZ_CP049979_3 3.9|4503836|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503836-4503867 32 KY579375 Sulfolobus spindle-shaped virus 3 strain REY 15/4, complete genome 4523-4554 9 0.719
NZ_CP049979_3 3.9|4503836|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503836-4503867 32 EU030939 Sulfolobus spindle-shaped virus 5, complete genome 8793-8824 9 0.719
NZ_CP049979_3 3.9|4503836|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503836-4503867 32 JF412294 EBPR podovirus 1, partial sequence 3991-4022 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP020898 Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence 46007-46038 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013555 Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence 125777-125808 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP020950 Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence 134655-134686 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013587 Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence 68724-68755 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP043499 Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence 166140-166171 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013598 Rhizobium sp. N741 plasmid pRspN741c, complete sequence 103164-103195 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013578 Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence 125386-125417 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013544 Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence 36015-36046 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013566 Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence 125777-125808 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013502 Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence 103085-103116 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013508 Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence 103164-103195 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013519 Rhizobium sp. N113 plasmid pRspN113b, complete sequence 103163-103194 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013572 Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence 125386-125417 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013492 Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence 103161-103192 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013497 Rhizobium sp. N621 plasmid pRspN621b, complete sequence 103161-103192 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP013592 Rhizobium sp. N871 plasmid pRspN871b, complete sequence 103085-103116 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 CP007643 Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence 92301-92332 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NC_010996 Rhizobium etli CIAT 652 plasmid pB, complete sequence 100863-100894 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP034999 Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence 97248-97279 9 0.719
NZ_CP049979_4 4.1|4519549|32|NZ_CP049979|CRISPRCasFinder,CRT 4519549-4519580 32 MK249151 Blackfly microvirus SF02 isolate 049, complete genome 1908-1939 9 0.719
NZ_CP049979_3 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT 4503897-4503928 32 NZ_CP040452 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence 1679246-1679277 10 0.688
NZ_CP049979_4 4.1|4519549|32|NZ_CP049979|CRISPRCasFinder,CRT 4519549-4519580 32 NZ_CP038854 Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence 450688-450719 10 0.688
NZ_CP049979_4 4.2|4519610|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR 4519610-4519641 32 NZ_CP039902 Agrobacterium tumefaciens strain CFBP5877 plasmid pTiCFBP5877, complete sequence 33041-33072 10 0.688
NZ_CP049979_4 4.2|4519610|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR 4519610-4519641 32 NZ_CP039893 Agrobacterium tumefaciens strain CFBP5499 plasmid pTiCFBP5499, complete sequence 217865-217896 10 0.688
NZ_CP049979_4 4.2|4519610|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR 4519610-4519641 32 NZ_KY000025 Agrobacterium genomosp. 6 strain AR125 plasmid pTi_AR125, complete sequence 208000-208031 10 0.688
NZ_CP049979_4 4.2|4519610|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR 4519610-4519641 32 NZ_KY000029 Agrobacterium genomosp. 6 strain CFBP5499 plasmid pTi_CFBP5499, complete sequence 208000-208031 10 0.688
NZ_CP049979_4 4.8|4519976|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR 4519976-4520007 32 NZ_AP018282 Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome 109485-109516 11 0.656

1. spacer 2.1|2693244|40|NZ_CP049979|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

acagcacagcggggggaatttcaagaatgacccgcagcgc	CRISPR spacer
acagcacagcgggggtaatttcaagaatgacccgcagcgc	Protospacer
*************** ************************

2. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019314 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence) position: , mismatch: 6, identity: 0.812

-gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
gagattgt-cgccctgttgggcgagaacggtgc	Protospacer
 .*.**** ******* *******.******* 

3. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

-gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
gaggacgt-tgccctggtcggcgaagacggtgg	Protospacer
 .** .** .******** ******.*******

4. spacer 4.5|4519793|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

cgccgcggactcacgagcaggccatcacagac-	CRISPR spacer
aggcgcgaactgacgagcaggccatc-cacgcg	Protospacer
 * ****.*** ************** ** .* 

5. spacer 3.7|4503714|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to AP014927 (Ralstonia phage RSF1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

atctccagcgccttttcgacgcaacggtgcgc	CRISPR spacer
cacgccagcgcctgttcgacgaaacgggtctg	Protospacer
  * ********* ******* *****  *  

6. spacer 3.9|4503836|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033139 (Vibrio owensii strain 1700302 plasmid pVOWZ1, complete sequence) position: , mismatch: 9, identity: 0.719

ccagattccgctttctctaccttctctttttc	CRISPR spacer
aagaaaaacgcttcctctacattctctttttc	Protospacer
  ..*   *****.****** ***********

7. spacer 3.9|4503836|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to KY579375 (Sulfolobus spindle-shaped virus 3 strain REY 15/4, complete genome) position: , mismatch: 9, identity: 0.719

ccagattccgctttctctaccttctctttttc	CRISPR spacer
aagaaaatcgctttctctactttctctttgtc	Protospacer
  ..*  .************.******** **

8. spacer 3.9|4503836|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to EU030939 (Sulfolobus spindle-shaped virus 5, complete genome) position: , mismatch: 9, identity: 0.719

ccagattccgctttctctaccttctctttttc	CRISPR spacer
aagaaaatcgctttctctactttctctttgtc	Protospacer
  ..*  .************.******** **

9. spacer 3.9|4503836|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to JF412294 (EBPR podovirus 1, partial sequence) position: , mismatch: 9, identity: 0.719

ccagattccgctttctctaccttctctttttc	CRISPR spacer
gccttcgctgctttctcggccttctctttttc	Protospacer
 *   . *.******** .*************

10. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020898 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

11. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013555 (Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

12. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020950 (Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

13. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013587 (Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

14. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
aaggtcaccgccctgatcggcgaaaacggtgc	Protospacer
..* *   *******.* ************* 

15. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013598 (Rhizobium sp. N741 plasmid pRspN741c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

16. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013578 (Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

17. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013544 (Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

18. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013566 (Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

19. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013502 (Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

20. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013508 (Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

21. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013519 (Rhizobium sp. N113 plasmid pRspN113b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

22. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013572 (Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

23. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013492 (Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

24. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013497 (Rhizobium sp. N621 plasmid pRspN621b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

25. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013592 (Rhizobium sp. N871 plasmid pRspN871b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

26. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to CP007643 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

27. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NC_010996 (Rhizobium etli CIAT 652 plasmid pB, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

28. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

29. spacer 4.1|4519549|32|NZ_CP049979|CRISPRCasFinder,CRT matches to MK249151 (Blackfly microvirus SF02 isolate 049, complete genome) position: , mismatch: 9, identity: 0.719

ttttgtgccctggcgttttgctggctctcgcg	CRISPR spacer
atttgttccctggcgttttgttgggacatggc	Protospacer
 ***** *************.***  * .*  

30. spacer 3.10|4503897|32|NZ_CP049979|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
ttccctgccgccctggttggcgaatacggtgg	Protospacer
   ..   ********* ****** *******

31. spacer 4.1|4519549|32|NZ_CP049979|CRISPRCasFinder,CRT matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttttgtgccctggcgttttgctggctctcgcg	CRISPR spacer
accggtgccctggcgctttgcaggctccttcc	Protospacer
 .. ***********.***** *****.. * 

32. spacer 4.2|4519610|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039902 (Agrobacterium tumefaciens strain CFBP5877 plasmid pTiCFBP5877, complete sequence) position: , mismatch: 10, identity: 0.688

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   .. 

33. spacer 4.2|4519610|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039893 (Agrobacterium tumefaciens strain CFBP5499 plasmid pTiCFBP5499, complete sequence) position: , mismatch: 10, identity: 0.688

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   .. 

34. spacer 4.2|4519610|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000025 (Agrobacterium genomosp. 6 strain AR125 plasmid pTi_AR125, complete sequence) position: , mismatch: 10, identity: 0.688

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   .. 

35. spacer 4.2|4519610|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000029 (Agrobacterium genomosp. 6 strain CFBP5499 plasmid pTi_CFBP5499, complete sequence) position: , mismatch: 10, identity: 0.688

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   .. 

36. spacer 4.8|4519976|32|NZ_CP049979|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018282 (Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome) position: , mismatch: 11, identity: 0.656

ggaccaaatacccgtccctcaatccacgccgt	CRISPR spacer
tccttctttacccgtacctcaatccactccgc	Protospacer
   ..   ******* *********** ***.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1774241 : 1836433 51 Emiliania_huxleyi_virus(12.5%) tRNA,transposase,plate,protease NA
DBSCAN-SWA_2 2145335 : 2210993 78 Enterobacteria_phage(57.14%) capsid,tRNA,integrase,tail,protease,transposase,head,terminase,portal,lysis attL 2155497:2155543|attR 2202466:2202512
DBSCAN-SWA_3 3225139 : 3276171 64 Enterobacteria_phage(50.0%) tail,integrase,protease,terminase,portal,lysis attL 3250546:3250562|attR 3280867:3280883
DBSCAN-SWA_4 3647866 : 3699861 68 Escherichia_phage(58.62%) capsid,tail,integrase,head,holin,terminase,portal attL 3669278:3669293|attR 3707919:3707934
DBSCAN-SWA_5 4479821 : 4486961 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_6 4708606 : 4833677 99 Enterobacteria_phage(31.58%) tRNA,integrase,transposase,protease attL 4713992:4714008|attR 4764639:4764655
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage