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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP050120 Deinococcus radiodurans strain BND-54 chromosome 1, complete sequence 1 crisprs WYL,c2c9_V-U4,csa3,DEDDh 0 0 1 0
NZ_CP050123 Deinococcus radiodurans strain BND-54 plasmid pCP1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP050122 Deinococcus radiodurans strain BND-54 plasmid pMP1, complete sequence 1 crisprs NA 1 1 1 0
NZ_CP050121 Deinococcus radiodurans strain BND-54 chromosome 2, complete sequence 0 crisprs csa3 0 0 0 0

Results visualization

1. NZ_CP050120
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050120_1 171870-171958 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2468380 : 2477580 9 Paramecium_bursaria_Chlorella_virus(16.67%) protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP050122
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050122_1 91118-91196 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP050122_1 1.1|91142|31|NZ_CP050122|CRISPRCasFinder 91142-91172 31 NZ_CP050120.1 152604-152634 1 0.968
NZ_CP050122_1 1.1|91142|31|NZ_CP050122|CRISPRCasFinder 91142-91172 31 NZ_CP050120.1 2553533-2553563 2 0.935

1. spacer 1.1|91142|31|NZ_CP050122|CRISPRCasFinder matches to position: 152604-152634, mismatch: 1, identity: 0.968

cggagcgagaggcaaaagagacgtgctgcgg	CRISPR spacer
cggagcgagaagcaaaagagacgtgctgcgg	Protospacer
**********.********************

2. spacer 1.1|91142|31|NZ_CP050122|CRISPRCasFinder matches to position: 2553533-2553563, mismatch: 2, identity: 0.935

cggagcgagaggcaaaagagacgtgctgcgg	CRISPR spacer
cggagcgagcagcaaaagagacgtgctgcgg	Protospacer
********* .********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP050122_1 1.1|91142|31|NZ_CP050122|CRISPRCasFinder 91142-91172 31 NC_000958 Deinococcus radiodurans R1 plasmid MP1, complete sequence 55186-55216 0 1.0
NZ_CP050122_1 1.1|91142|31|NZ_CP050122|CRISPRCasFinder 91142-91172 31 NZ_CP050118 Deinococcus radiodurans strain BNK-50 plasmid pMP1, complete sequence 146645-146675 0 1.0
NZ_CP050122_1 1.1|91142|31|NZ_CP050122|CRISPRCasFinder 91142-91172 31 NZ_CP050122 Deinococcus radiodurans strain BND-54 plasmid pMP1, complete sequence 91142-91172 0 1.0
NZ_CP050122_1 1.1|91142|31|NZ_CP050122|CRISPRCasFinder 91142-91172 31 NZ_CP031502 Deinococcus radiodurans strain R1 dM1 plasmid pMP1, complete sequence 101703-101733 0 1.0

1. spacer 1.1|91142|31|NZ_CP050122|CRISPRCasFinder matches to NC_000958 (Deinococcus radiodurans R1 plasmid MP1, complete sequence) position: , mismatch: 0, identity: 1.0

cggagcgagaggcaaaagagacgtgctgcgg	CRISPR spacer
cggagcgagaggcaaaagagacgtgctgcgg	Protospacer
*******************************

2. spacer 1.1|91142|31|NZ_CP050122|CRISPRCasFinder matches to NZ_CP050118 (Deinococcus radiodurans strain BNK-50 plasmid pMP1, complete sequence) position: , mismatch: 0, identity: 1.0

cggagcgagaggcaaaagagacgtgctgcgg	CRISPR spacer
cggagcgagaggcaaaagagacgtgctgcgg	Protospacer
*******************************

3. spacer 1.1|91142|31|NZ_CP050122|CRISPRCasFinder matches to NZ_CP050122 (Deinococcus radiodurans strain BND-54 plasmid pMP1, complete sequence) position: , mismatch: 0, identity: 1.0

cggagcgagaggcaaaagagacgtgctgcgg	CRISPR spacer
cggagcgagaggcaaaagagacgtgctgcgg	Protospacer
*******************************

4. spacer 1.1|91142|31|NZ_CP050122|CRISPRCasFinder matches to NZ_CP031502 (Deinococcus radiodurans strain R1 dM1 plasmid pMP1, complete sequence) position: , mismatch: 0, identity: 1.0

cggagcgagaggcaaaagagacgtgctgcgg	CRISPR spacer
cggagcgagaggcaaaagagacgtgctgcgg	Protospacer
*******************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 7861 : 82110 53 Bacillus_phage(38.89%) transposase,integrase attL 8981:9018|attR 82271:82308
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage