CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP036534	Streptomyces sp. VN1 chromosome, complete genome	11 crisprs	DEDDh,WYL,cas4,csa3,Cas9_archaeal,cas3,DinG	3	5	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP036534_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_1

851181-851333

Orphan

Consensus_repeat	Method
CCGGTCCGGTGGGTCCTCGTCGGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP036534_1

>merge|NZ_CP036534|1|851181-851333|CRISPRCasFinder
CCGGTCCGGTGGGTCCTCGTCGGCGCGGGAGCGGAACCCGCCCAGTGGTTCTCGTCGGCGCGGGAGCGGTCCCGGTCCGGTGGGTTCTCGTCGGCACGACGGCGGGGCCCGTCAGCCGAGCCAGCCCGGCCGGACCAGTCCGGACTCGTAGGC

>NZ_CP036534|1|1|851181-851333|CRISPRCasFinder
CCGGTCCGGTGGGTCCTCGTCGGC	GCGGGAGCGGAACCCGCCCAGTGGTTCTCGTCGGCGCGGGAGCGGTC
CCGGTCCGGTGGGTTCTCGTCGGC	ACGACGGCGGGGCCCGTCAGCCGAGCCAGCCCGG
CCGGACCAGTCCGGACTCGTAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_031029464.1\|845743_846697_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP036534.1\|WP_051159462.1\|860352_861222_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031029482.1\|853364_854663_-\|geranylgeranyl-reductase-family-protein	unknown	unknown	gnl\|CDD\|273936
NZ_CP036534.1\|WP_079154857.1\|859098_860175_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP036534.1\|WP_166623605.1\|847570_848950_+\|beta-glucosidase	unknown	unknown	gnl\|CDD\|274539
NZ_CP036534.1\|WP_031029491.1\|857448_857643_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_037762041.1\|850396_851137_+\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	unknown	unknown	gnl\|CDD\|274422
NZ_CP036534.1\|WP_031029494.1\|857755_858709_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP036534.1\|WP_031029502.1\|862680_863643_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP036534.1\|WP_031029450.1\|838853_839450_+\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|153102
NZ_CP036534.1\|WP_166623603.1\|841876_844147_-\|alpha-xylosidase	unknown	unknown	gnl\|CDD\|236731
NZ_CP036534.1\|WP_031029467.1\|846702_847530_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP036534.1\|WP_166623604.1\|844433_845720_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP036534.1\|WP_166623606.1\|849098_850289_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340951
NZ_CP036534.1\|WP_031029485.1\|854812_856168_+\|dipeptidase	unknown	unknown	gnl\|CDD\|236127
NZ_CP036534.1\|WP_166623608.1\|851953_853207_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP036534.1\|WP_166623609.1\|856246_857290_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|239217
NZ_CP036534.1\|WP_031029452.1\|839460_840528_+\|membrane-protein	unknown	unknown	gnl\|CDD\|274414
NZ_CP036534.1\|WP_037762019.1\|861202_862501_-\|aldolase	unknown	unknown	gnl\|CDD\|367449
NZ_CP036534.1\|WP_037762056.1\|840617_841820_+\|cysteine-desulfurase-like-protein	unknown	unknown	gnl\|CDD\|273906

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_031029464.1\|845743_846697_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.13227e-91
NZ_CP036534.1\|WP_031029482.1\|853364_854663_-\|geranylgeranyl-reductase-family-protein	gnl\|CDD\|273936	TIGR02032, Uncharacterized_protein_MJ1520, geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	6.83105e-99
NZ_CP036534.1\|WP_079154857.1\|859098_860175_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.26735e-102
NZ_CP036534.1\|WP_166623605.1\|847570_848950_+\|beta-glucosidase	gnl\|CDD\|274539	TIGR03356, BGL, beta-galactosidase.	0
NZ_CP036534.1\|WP_037762041.1\|850396_851137_+\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	gnl\|CDD\|274422	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083. This protein family pulls together several groups of proteins, each very different from the others. They share in common three conserved regions. The first is a region of about 38 amino acids, nearly always at the N-terminus of a protein. This region has a bulky hydrophobic residue, usually Trp, at position 29, and a His residue at position 37 that is invariant, so far, in over 150 instances. The second conserved region has a motif [DE]xxxHxxD. The third conserved region contains a hydrophobic patch and a well-conserved Arg residue. Most examples are found in the Actinobacteria, including the genera Mycobacterium, Corynebacterium, Streptomyces, Nocardia, Frankia, etc. The pattern of near-invariant residues against a backdrop of extreme sequence divergence suggests enzymatic activity and conservation of active site residues.	2.42418e-17
NZ_CP036534.1\|WP_031029494.1\|857755_858709_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	7.55546e-64
NZ_CP036534.1\|WP_031029502.1\|862680_863643_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	4.34175e-105
NZ_CP036534.1\|WP_031029450.1\|838853_839450_+\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|153102	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain. DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. Members of the DPS family are homopolymers formed by 12 four-helix bundle subunits that assemble with 23 symmetry into a hollow shell. The DPS ferroxidase site is unusual in that it is not located in a four-helix bundle as in ferritin, but is shared by 2-fold symmetry-related subunits providing the iron ligands. Many DPS sequences (e.g., E. coli) display an N-terminal extension of variable length that contains two or three positively charged lysine residues that extends into the solvent and is thought to play an important role in the stabilization of the complex with DNA. DPS Listeria Flp, Bacillus anthracis Dlp-1 and Dlp-2, and Helicobacter pylori HP-NAP which lack the N-terminal extension, do not bind DNA. DPS proteins from Helicobacter pylori, Treponema pallidum, and Borrelia burgdorferi are highly immunogenic.	3.32934e-46
NZ_CP036534.1\|WP_166623603.1\|841876_844147_-\|alpha-xylosidase	gnl\|CDD\|236731	PRK10658, PRK10658, putative alpha-glucosidase; Provisional.	0
NZ_CP036534.1\|WP_031029467.1\|846702_847530_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.23566e-72
NZ_CP036534.1\|WP_166623604.1\|844433_845720_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	7.02051e-73
NZ_CP036534.1\|WP_166623606.1\|849098_850289_+\|MFS-transporter	gnl\|CDD\|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.0094e-94
NZ_CP036534.1\|WP_031029485.1\|854812_856168_+\|dipeptidase	gnl\|CDD\|236127	PRK07907, PRK07907, hypothetical protein; Provisional.	0
NZ_CP036534.1\|WP_166623608.1\|851953_853207_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.90371e-55
NZ_CP036534.1\|WP_166623609.1\|856246_857290_-\|NUDIX-domain-containing-protein	gnl\|CDD\|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	6.57924e-19
NZ_CP036534.1\|WP_031029452.1\|839460_840528_+\|membrane-protein	gnl\|CDD\|274414	TIGR03062, hypothetical_protein_lp_1332, YhgE/Pip C-terminal domain. This family contains the C-terminal domain of a family of multiple membrane-spanning proteins of Gram-positive bacteria. One member was shown to be a host protein essential for phage infection, so many members of this family are called "phage infection protein". A separate model, TIGR03061, represents the conserved N-terminal domain. The domains are separated by regions highly variable in both length and sequence, often containing extended heptad repeats as described in model TIGR03057.	0.000228456
NZ_CP036534.1\|WP_037762019.1\|861202_862501_-\|aldolase	gnl\|CDD\|367449	pfam03328, HpcH_HpaI, HpcH/HpaI aldolase/citrate lyase family. This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase and 4-hydroxy-2-oxovalerate aldolase.	3.67801e-05
NZ_CP036534.1\|WP_037762056.1\|840617_841820_+\|cysteine-desulfurase-like-protein	gnl\|CDD\|273906	TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase. [Unknown function, Enzymes of unknown specificity].	1.86282e-170

>NZ_CP036534.1|WP_037762041.1|850396_851137_+|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme
MQTTAYVETLDREGALLAAAAEAAGGDAEVPTCPAWRVRDLLRHTGMVHRWATAFVAEGYTGPRPGGPLPDLDGAPLLAWFREGHGRLVDTLAGASPDVRCWHFLPAPSPLAFWARRQAHETTVHRLDAEAAAGGVPTGIGSDFAVDGIDELLCAFHTRPKSAVRTDGPRTLRVRATDVPDAVWTVRLSAQPPVTERDGTGGADCEVTGPAAVLYPALWNRRAFPTVHGDASLAALWRERSGVTWR
>NZ_CP036534.1|WP_166623606.1|849098_850289_+|MFS-transporter
MPGRRDDLTRLRAALTAFFALDGFVFAGWVVRIPAVKEQTGASASALGLALLGVSAGAVVTMTLTGRLVRRYDSHRVTVACAVLLCLSIALPPLTHSALALGAVLLVFGSAYGGINVAFNSAAVDLVAELRRPIMPSFHAAFSLGGMVGAGLGGLVAGSLSPTRHLLALTVTGLLVTLVAGRVLLRIEPLAPAERAAEEEGPAEKEGAGRRPDRRTRRLVVTFGLIALCTAYGEGAMADWGALHLEQDLDASPGLAAAGYSCFALAMTVGRLTGTTLLERLGRTATVVAGGTTAVAGMLTGALAPSVWAALFGFAITGLGLANIFPVAIERAGALGGPSGVATASTLGYGGMLLGPPAIGFMADWFSLPAALTSVAVLAAVAVLVAVATRRATVPA
>NZ_CP036534.1|WP_166623605.1|847570_848950_+|beta-glucosidase
MSDYPGFPPGFVLGAATASYQIEGAAQEDGRGPSIWDTYSHTPGLVANGDTGDVACDHYHRYPEDVALLRDLGVHSYRFSIAWPRIVPDGSGPVNRKGLDFYSRLVDELLTAGIEPAATLYHWDLPQALEDRGGWRVRETAERFAEYTAVVAEHLGDRVPRWITLNEPWCSSFLGYSVGRHAPGAKEGRGALAAAHHLLVGHGLAVKALRAAGVREVGITLNLDRNLPATDSAADLAAVVRADTQHNLVWTEPILAGRYPAAEEETWGELITGADFRQDGDLELISQPLDFLGVNYYRPIVVGDAPHRESDPARRVATDNRYQEVRLPGVRETAMGWPVVPDSFTDLLVALKQQYGDALPPVHITENGSAEDDAPAADGAVHDTDRVAYLHDHLTALKSAIDAGVDVRGYYVWSLLDNFEWAYGYDKRFGIVRVDYDTQERTPKDSYRWYREMIAANRG
>NZ_CP036534.1|WP_031029467.1|846702_847530_+|carbohydrate-ABC-transporter-permease
MASHTPTASRRRWGSTVAGVLILCVMLFPLYWMLNTALQPDSGLLQVDPVPGGLDLSGFSKAVTDQGGHLLTSLAVSLGAVAICLAVSAPAAYGLARFGLRGSRTIVFGTLITQMVPGIVIANALYNSYVDLGLVNSYFGLMLADASLGIPFSIVLMRSFMVSIPGEVIEAAQIDGAGPVRTFVRVVLPMSRNSLITSGLFAFLFAWSDFMFALTLNTTDDVKPITLGIYQYIGAHVGDWGSVMAASVLSAVPAAILLVLAQKYIAAGITGGSVK
>NZ_CP036534.1|WP_031029464.1|845743_846697_+|sugar-ABC-transporter-permease
MPTSAVTARTPAEAPEPAAAPDPGRIARRRRLAQWGFVAPAVVFMLLFFGYPLVRNVVMSFQDYTPKTFFTGEAPFNGADNWSNVFQDALFGKALWHTLVFTAGSLLGQFCIGLALAVFFSRRFPLNGVLRSLILLPWLVPMVVSGIVWRRILDQDTGVLNSFLDTLGIAGHTPWLTSPEMALVSVILVNIWIGIPFNMVILYGGLQEIPKELHEAAALDGASAWRTFRSVTLPMLKPVVTVVLVLGFMSTVKILDLILALTDGGPADATQTLGTLTYQNSFVQLDFGAGAVVGNVLILISAVFAVFYLRANRTEGK
>NZ_CP036534.1|WP_166623604.1|844433_845720_+|sugar-ABC-transporter-substrate-binding-protein
MSKRFTSLALTAHPPAATHRGRERARRVVAPFAAVSVLVAGAALTGCGQQRDADVYTVMNSSTDESYHRWDAEAMARCGKQLGITIEQQSVPAAQVMTKALRMASSKSLPDIVQFDASEMPTFADAGGLVDLRTLGLSTDGIPDGIVDFGSYKGTYYGAARSVNTLALFYNKDVLDRAGVEVPTTWTGLRETAKRLTQGKQYGLALSAGGAEDGVFQFTPFMWSNGGDETDLDAPQVVEALDYWKGLLQDGSLSKSTVNWTQADVNDQFMAGNAAMMINGPWQVETLNSDKSLHWGIAPIPVPEAGDDSVGPLGGAVLTVPNTGDEAREKTAARIVACLASEKEQLTYALNSWMVPANARAAAVWREKVPELDSLADQVAVARSRTGKLGAGWSSVSLALQSAFQSALTGQSSETALKRAQQRATSGN
>NZ_CP036534.1|WP_166623603.1|841876_844147_-|alpha-xylosidase
MKFTDGFWLVREGVHLSYATEVRDVRHESKRFTAHAAVQKVTRRGDTLNAPLLTVECFSPVEGVIGVRVTHHAGKRRTGPEFALADPADGASEVRREGTVTELTSGPLTLRLDREGPWGLTFRDADGRELTRANAKGTAFATTDDGAHHMLGRLALGVGEQVYGLGERFTPFVKNGQAVDMWQADGGTSSEQAYKNVPFYLSSRGYGVFVNHPGAVSFEVGSESVGQVQFSVEDQTLEYYVVAGPTPKDVLTRYTALTGRPALPPAWSFGLWLTTSFTTSYDETTVTSFVDGMAERDIPLSVFHFDCFWMREYQWCDFRWDPDVFPDPDGMLARLKARGLRISVWINPYIGQKSPLFEEAAALGHLVRRANGDIWQWDLWQAGMGLVDFTSPAARDWFAAKLKPLLDQGVDCFKTDFGERIPTDVVWHDGSDPERMHNYYTHLFNRTVFELLEKERGRGEAVLFARSATAGGQQYPVHWGGDCFSSFEAMAESLRGGLSLSLSGFGFWSHDIGGFEGTPDAAVFKRWLAFGLLSSHSRLHGSSSYRVPWEFGEEAVEVARDFTRLKHRLMPYLYGVAAEAHRTGVPMMRPMVLEYPHDPGCRPLDRQYMLGPDLLVAPVFTEDGEVEVYLPEGTWTHLLTGERVTGPVWRTERHGYDSLPLYVREGAVLPLARDDRRPDGDWLDAPTLLVHPPARADWAAEVTVPDLLGTAAAAFRVRREGDVLRVTASGTDRPFTVRVAGGASADGTGEVTVPLG
>NZ_CP036534.1|WP_037762056.1|840617_841820_+|cysteine-desulfurase-like-protein
MALDVEAIRAQIPALKSGSARFDAPGGTQTPQPVIDAIGEALANPLANRGRTTEGERNADGIVSEARAALGDLLATDPRGIVLGRSATQLAYDLSRTLAKSWGPGDEVVVTRLDHDSNIRPWAQAAEAAGASVRTADFDPATGELRPEHVEAVLSPRTRLVAVTAASNLVGAMPDLPAVARLAHGVGALVHVDAVHYASHAVVDPAALGADTLVCSPYKFLGPHLGVLAARPEFLESLRPDKLLPSSDSVPERFELGTLPYELLAGTRAAVDFLAGLDPEARGSRRDRLVASFAALEAHEDALRGRIEQGLAALDGITVYSRAARRTPTLLFTVAGLRPAEVYRHLADHGVDAPAGTFYALEASRRLGLGDEGGVRVGLAPYTDTDDVDRLLTALGTLNG
>NZ_CP036534.1|WP_031029452.1|839460_840528_+|membrane-protein
MAHLSEDDAGAGPPPRGHRWAAFRQTPFWPATVLMLILAAAAGLFAGSYTYSMANPTPRLIPTAVVGQYEQDRGRAFLAGLEKALDTSVRVHPYRTRTAAHEAIEQQEVFAVFELRDDGRNAVLDVSGASGASVAELLTKTAPAVGEKLGVHVTVHDVNPLQEGDPRGLAIFYVSLAAVIIGFVGAIQLSVHARSLTPVERILFTAAYALLGGFAIAATVDWLLGALDLPFAESWSILALTMFVSGMVFTMFNTLFGRWAMLPTWGLMVIIGNPSSGGAVSWPLLPSPLGLIGRWLPPGGSVNAQHTAVYFQGHQHVFPFLVLGGWALLSCTVFWVWRHRHPGGREKSAVTAEEP
>NZ_CP036534.1|WP_031029450.1|838853_839450_+|DNA-starvation/stationary-phase-protection-protein
MSSPKSSSSAQHSSDGSQPWLHQQGRIIQEFGTVKQFPVALSMETRLYSGQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTIAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQELGDDGTNDLLVSEVVRTNELQAWFVAEHLVDTPLVHA
>NZ_CP036534.1|WP_166623608.1|851953_853207_-|sensor-histidine-kinase
MAAMDAKRGRGGGQPRWRRHGPPRWDRWGDEERRHRWPWRSTVLVTAFVLVGTGFAAHAQEGERSAPDPFAHALLFVTGAALLWRQRYPVPVVFGTAVTTLVYLGAGYPYGPVFLAVAVACFSAVVAGHRRAAWTAMGVLWAGHALVAHWLYRWLPPSGDSAASWGQEAVIATWVVAIAALSELARVRREQWARMRAERIRAARRRADEERLRIARELHDVLAHSISVINVQAGVGLALLDTDPEQARTALTTIKAQSKEALGEVRTVLDTLRTPGDAPRAPAPGLDRLPELVEQAAAAGLTVGVEGEVPRLSPGTGLAVFRIVQEALTNVVRHSGSRHARVRLDREGGTLRLCVDDDGPATGTDAGGSGNGLAGMRERAAGLGGTIEAGPRPDGGFRVLATLPADVGHGTRPEEDR
>NZ_CP036534.1|WP_031029482.1|853364_854663_-|geranylgeranyl-reductase-family-protein
MSSENSSAGDARQVWDVVVVGAGPAGASAAYAAAVAGRRVLLLEKAELPRYKTCGGGIIGPSRDTLPPGFELPFRDRVHAVTFSNNGRFTRTRRSRQMLFGLINRPEFDQQLVEHAQKAGAELRTGATVTRVEQHGSAVPDRRTVAVVLQGGETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVPETVADDWKGRVLIDWGPLPGSYGWVFPKGDTLTVGVISARGEGAATKRYLEDFVGRLGLAGFEPSISSGHLTRCRADDSPLSRGRVLVCGDAAGLLEPWTREGISFALRSGRLAGEWAVRIAESHDAVDARKQALNYAFAIKAGLGVEMSVGKRMLAVFERRPGLFHAALTGFRPAWKAFKDITQGSTTLGELVRGHPLAQRALAAMDRRPAGGEDTAPSAPADTVPATAPARADDEAGA
>NZ_CP036534.1|WP_031029485.1|854812_856168_+|dipeptidase
MSSNPVAETVASLMPRAKEELAALVAFRSVADFEQFPRSESVGAAEWTAAALRAEGFQDVALLDTPDGTQSVYGYLPGPEGAKTVLLYAHYDVQPPLDEAAWVSPPFELTERDGRWYGRGAADCKGGVIMHLLALRALKANGGVPVHVKVIAEGSEEQGTGGLERYAEAHPELLAADTVVIGDTGNFRVGLPTVTATLRGMTMLRVRVDTLEGNLHSGQFGGAAPDALAALIRVLDSLRAEDGSTTVDGLAADSVWEGLAYDDEQFRRDARVLDGVELIGSGTVADRVWARPAVTVLGIDCPPVVGATPSVQASARALVSLRLPPGVDATAATKLLRAHLEARTPWGARVDVEQIGQGQAFRADTTSPAYRAMADAMAVAYPGEEMQYAGQGGSIPLCNTLAALYPQAEILLIGLSEPDAQIHAVNESVSPEELERLSVAEAHFLLNYAAS
>NZ_CP036534.1|WP_166623609.1|856246_857290_-|NUDIX-domain-containing-protein
MTVVWINGAFGAGKTTTARELIDLIPNSTLFDPEVVGGALAQLLPPKRLAEVGDFQDLPIWRRLVIDTAAAMLADLGGTLVVPMTLLRQEYRDEIFGGLAARRIDVRHVLLAPAETILRERMARREIPDGLPDDGIRFRQWSHDHLKPYRSALASWLTADAHPVDTGALTPREAAARVAEAVGTGAVPACGIVQTPEPTGETVAAGVLLFDEQDRVLLVDPTYKPGWEFPGGVVEPGEAPARAGVREVAEETGIRLDDVPALLVVDWEPPAPPAYGGLRMLFDGGRLGSAGAGRVLLPGAELRAWRFVTEDEAADLLPPVRYERLRWALRARERGAALYLEAGTPVG
>NZ_CP036534.1|WP_031029491.1|857448_857643_-|hypothetical-protein
MKKRSMLALASLATGFVVAAVTPSHAAPSELPLGLDLQDTVSTVQDTVATDSLTLDEGSLGQLG
>NZ_CP036534.1|WP_031029494.1|857755_858709_-|ROK-family-protein
MHTDLVAALDIGGTKIAGALVDGDGRIQARAQRATPAREDGDTVMGAVEAVLAELTASPLWGRATAVGIGSAGPVDASAGTVSPVNVPGWRDYPLVRRVRAAAGDLPVELIGDGVAIAAAEHWHGAARGHDNALCMVVSTGVGGGLVLGGRLHPGPTGNAGHIGHISVDLDGDPCPCGARGCVERIASGPNIARRALEAGWLPGPDGDASAAAVAASARLGDPVAVASFERAAQALAAGIAATATLVEIDIAVVGGGVGKAGDVLFAPLRKALTDYATLSFVRRLAVVPAQTGTDAGLVGAAAAALTRTPGARTAHV
>NZ_CP036534.1|WP_079154857.1|859098_860175_+|LacI-family-transcriptional-regulator
MDDMTGHRIVPDTTRRAARTPGNRYGNRPTMKDVAARAGVGLKTVSRVVNGEPGVTPETERRVQEAIDALGFRRNDSARVLRKGRTASIGLVLEDLADPFYGPLSRAVEEVARAHGALLINGSSAEDPEREQELVLALCARRVDGLVVIPAGDDHRYLEPEVKAGVATVFVDRPAGQIDADVVVSDNFGGARDGVAHLIAHGHRRIGFIGDMPRIHTAAERLRGYRAAMEDAGITVQGSWMSLGVTDPERVRRAAEEMLAGPRPVTAIFTGNNRVTVTVVRVLAEHPPGAALVGFDDIELADLLRPGVTVVAQDAAALGRTAAERLFRQLDGTLLAPERIELPTRLVTRGSGELPPAL
>NZ_CP036534.1|WP_051159462.1|860352_861222_+|hypothetical-protein
MSRPSERDRGPERPPGEDRTLEALGLAGVPREEPLLYPGAWPRESGLLDGDRLLPLAGAVHDDGGGRVPVLAIGSNASPGQLRHKMAEFGIGSPVPMVRSRVTGLGIGVSAHVSRMGYVSASPVAAPGAVRELFVLWLDAEQLAVVDASEGVPVAGGNFDRAWLPAPDVRVEPGDGSVLPGAYAYVNRHGVLHDGTGTGAPRRHPGEQRPLIAGLLHGSARLRALFGTTPDEFCARARADRRLCDRGTRLFLEEERVTASGLERYVGGGPDDPFAGARPPSAGPTGPTP
>NZ_CP036534.1|WP_037762019.1|861202_862501_-|aldolase
MGQQEKVATSLAGAVGEEISASLAPVDAELERRYPGDPGTRQPVHTVYVPGDAYAADTVRSWGDRALAALDEHAPDAASLAAVLGLADDLAEPVYARVRAKLEREPIEDLRIDFEDGYGGRTDAEEDEAAARAARLTAEAYERGTAAPYTGIRMKCMEAPVRARGIRTLDVFLSGLVEAGGLPDGLVLTLPKVTYPEQVTAMVRLLEAFEKARGLEAGRIGFEIQIETSQSILAADGTATVARLIQAAEGRATGLHYGTFDYSACLGVSAAHQASDHPAADHAKAVMQVAAAGTGVRVSDGSTNVLPVGPTPKVHDAWRLHYGLTRRALARAYYQGWDMHPGHLPTRYAAVFAFYREGFEQAAARLARYANRTGGDVMDEPATAKALSGYLLRGLDCGALDIGEVARLTGLTRADLESFSAPRRGDLTASAQ
>NZ_CP036534.1|WP_031029502.1|862680_863643_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MAEVLVYVDHVDGAVRKPTLELLTLARRVGEPVAVALGNGAGDTAAALAEHGAVKVLTSEAAEYADYLVVPKVDALQAAVGQVSPAAVLVPSSAEGKEIAARLALRLGSGIITDAVDLEAGDEGPVATQSVFAAAFSTKSRVSKGTPVITVKPNSAAVEPAPAAGAVEALAVTFSDAATGTKVTGRTPRESTGRPELTEAAIVVSGGRGVNGAENFAIIEALADSLGAAVGASRAAVDAGWYPHTNQVGQTGKSVSPQLYIASGISGAIQHRAGMQTSKTIVAINKDAEAPIFELVDYGVVGDLFDVVPQLTEEVKTRKG

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Crispr_ID: NZ_CP036534_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_2

1631614-1631744

Orphan

Consensus_repeat	Method
GGGCACCACGCGCGCGCGTGCGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP036534_2

>merge|NZ_CP036534|2|1631614-1631744|CRISPRCasFinder
GGGCACCACGCGCGCGCGTGCGGGCGCGCCGGGCACCACGCGCGCGCGTGCGAGCGCGCCGGGCACCCCGCGCGCGCGTGCGGAAGTAACGGAAGCAGCGGAAGAAACCTCCCGCACGCGCGCGCGTGCGG

>NZ_CP036534|2|2|1631614-1631744|CRISPRCasFinder
GGGCACCACGCGCGCGCGTGCGG	GCGCGCCGGGCACCACGCGCGCGCGTGCGAGCGCGCC
GGGCACCCCGCGCGCGCGTGCGG	AAGTAACGGAAGCAGCGGAAGAAAC
CTCCCGCACGCGCGCGCGTGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_031047593.1\|1628136_1628385_-\|chaplin	unknown	unknown	gnl\|CDD\|367652
NZ_CP036534.1\|WP_070387731.1\|1630616_1631312_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP036534.1\|WP_070387730.1\|1625762_1626194_-\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|224501
NZ_CP036534.1\|WP_070387734.1\|1633703_1636280_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP036534.1\|WP_166623813.1\|1629205_1630384_-\|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP036534.1\|WP_037770637.1\|1639386_1640685_-\|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl\|CDD\|129974
NZ_CP036534.1\|WP_031047596.1\|1628571_1629213_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP036534.1\|WP_031047646.1\|1642358_1643063_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|273824
NZ_CP036534.1\|WP_166623814.1\|1632880_1633579_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381605
NZ_CP036534.1\|WP_166623812.1\|1627199_1627982_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031047585.1\|1624572_1625514_-\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP036534.1\|WP_031047628.1\|1638169_1638688_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|224973
NZ_CP036534.1\|WP_037770590.1\|1638781_1639006_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_037770609.1\|1626248_1627046_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP036534.1\|WP_078536047.1\|1643239_1643740_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP036534.1\|WP_037770593.1\|1636840_1638085_+\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP036534.1\|WP_031047643.1\|1641585_1642353_-\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|236124
NZ_CP036534.1\|WP_031047582.1\|1623914_1624421_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP036534.1\|WP_031047640.1\|1640809_1641487_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP036534.1\|WP_031047577.1\|1623174_1623714_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|176643

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_031047593.1\|1628136_1628385_-\|chaplin	gnl\|CDD\|367652	pfam03777, DUF320, Small secreted domain (DUF320). Small domain found in a family of secreted streptomyces proteins. It occurs singly or as a pair. Many of the domains have two cysteines that may form a disulphide bridge.	5.26234e-17
NZ_CP036534.1\|WP_070387731.1\|1630616_1631312_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.46192e-40
NZ_CP036534.1\|WP_070387730.1\|1625762_1626194_-\|NfeD-family-protein	gnl\|CDD\|224501	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	6.94238e-17
NZ_CP036534.1\|WP_166623813.1\|1629205_1630384_-\|GAF-domain-containing-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.22167e-55
NZ_CP036534.1\|WP_037770637.1\|1639386_1640685_-\|CynX/NimT-family-MFS-transporter	gnl\|CDD\|129974	TIGR00896, Inner_membrane_transport_protein_YeaN, cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. [Transport and binding proteins, Other].	1.21656e-138
NZ_CP036534.1\|WP_031047596.1\|1628571_1629213_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.04675e-81
NZ_CP036534.1\|WP_031047646.1\|1642358_1643063_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|273824	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. [Fatty acid and phospholipid metabolism, Biosynthesis].	8.17042e-119
NZ_CP036534.1\|WP_166623814.1\|1632880_1633579_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381605	cd13402, LT_TF-like, lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	5.75512e-32
NZ_CP036534.1\|WP_070387734.1\|1633703_1636280_-\|FHA-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.93908e-75
NZ_CP036534.1\|WP_031047585.1\|1624572_1625514_-\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	1.0241e-66
NZ_CP036534.1\|WP_031047628.1\|1638169_1638688_-\|histidine-phosphatase-family-protein	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	1.72059e-46
NZ_CP036534.1\|WP_037770609.1\|1626248_1627046_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	2.50626e-92
NZ_CP036534.1\|WP_078536047.1\|1643239_1643740_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	3.25819e-20
NZ_CP036534.1\|WP_037770593.1\|1636840_1638085_+\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.24218e-92
NZ_CP036534.1\|WP_031047643.1\|1641585_1642353_-\|enoyl-ACP-reductase-FabI	gnl\|CDD\|236124	PRK07889, PRK07889, enoyl-[acyl-carrier-protein] reductase FabI.	1.18818e-172
NZ_CP036534.1\|WP_031047582.1\|1623914_1624421_+\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	8.79144e-18
NZ_CP036534.1\|WP_031047640.1\|1640809_1641487_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	1.72786e-50
NZ_CP036534.1\|WP_031047577.1\|1623174_1623714_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|176643	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea. PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.	3.63889e-61

>NZ_CP036534.1|WP_070387731.1|1630616_1631312_+|SDR-family-oxidoreductase
MPVAIITGASKGLGRAFAEALAARGWDLVLDARDAEVLQGTATALEAYGARVTALPGDVTDAGHRAALVAGARLLGGVDLLVSNASALGAEPLVRLAELPLDGLRRALEVNVVAALGLVREALPSLRAAPAGAVLTVSSDAAAEAYETWGGYGASKAALDQLAAVLGAEEPGLRVWAVDPGDMATDLYAAAVPDDDDPRPDPVSVVPALLRLLDERPASGRYGAPALLEER
>NZ_CP036534.1|WP_166623813.1|1629205_1630384_-|GAF-domain-containing-sensor-histidine-kinase
MSHGPRSGLAAVSSALLAMSRHLEVRDVLKTIVASARELLDAQYAALGVPDDHGGFAQFVVDGVSDEQWKAIGPLPRQHGILAAMLHEATPERLADVRKDPRFGGWPSAHPDLVDFLGLPIRDGDEVIGALFLANKLRPEGQDPAHSPCPEPSGTCGFTPDDEELLGILAQHAAIALTNARLYERSRELTIAEERSRLAHELHDAVSQKLFSLRLTAQAATALVDRDPARAKGELHQVATLAAEAADELRAAVVELRPAALEEDGLVATLRTQIQVLDRAHAARVTFTGHGVKALPAAQEEALLRVAQEALHNALRHSGAAHVEVTLKRQDSGAVLRVTDDGGGFDPRAVRRAGRHLGLVSMRDRAGGTGGRLTVHSAPGEGTTIEMEVPGG
>NZ_CP036534.1|WP_031047596.1|1628571_1629213_-|response-regulator-transcription-factor
MADPIKVLLVDDHQVVRRGLRTFLEVQDDIEVVGEAADGAEGVDRAQELRPDVILMDVKMPGMDGVDALRRLRELDNDARVLVVTSFTEQRTVVPALRAGAAGYVYKDVDPDALAGAIRSVHAGHILLQPEVAGALLSQEESNSGPGRAGSLTEREREVLGLIADGRSNREIARALVLSEKTVKTHVSNILMKLDLADRTQAALWAVRHGVAG
>NZ_CP036534.1|WP_031047593.1|1628136_1628385_-|chaplin
MKNLKKAAAVSMVAGGLMVAGAGMASATDGGAHAHGEAIGSPGVASGNLVQAPIHIPVNAVGNSVNVIGVLNPAFGNLGLNH
>NZ_CP036534.1|WP_166623812.1|1627199_1627982_+|hypothetical-protein
MLSEPRAGRLAAWGNALIAHMVSPDDAVVAIVGEDAVHRVEGLPGESAPVGLTLALGRLRALGASGLRVALPAPGHPLGLSGPPDFNARALEAEEAVICEGAALGLVPEVYEAGPEGDVHVEVVWHCLPVREAPPADVPSLGEAERELAEALRDATEVLTRLDVAGSGPVAEAAIEAYRARAEQGREVLAPGYPPRAVRVLELAQRVGALVTLASENGHGGAVSASEIAARGEALRPVERVARRAQVAAYNSFVAERGMR
>NZ_CP036534.1|WP_037770609.1|1626248_1627046_-|ABC-transporter-ATP-binding-protein
MSDVLELQDVSVVREGRALVDQVSWSVKEGERWVILGPNGAGKTTLLNVASSYLYPSNGTATILGETLGKPGTDVFELRPRIGVAGIAMADKLPKRQTVLQTVLTAAYGMTAGWQEEYEDIDERRARAFLDRLGMTEYLDRRFGTLSEGERKRTLIARALMTDPELLLLDEPAAGLDLGGREDLVRRLGRLARDPIAPSMIMVTHHVEEIAPGFTHVLMIRQGKVMAAGPLELELTSRNLSHCFGLPLVVEQAGDRWTAKGLPLS
>NZ_CP036534.1|WP_070387730.1|1625762_1626194_-|NfeD-family-protein
MNDIDAWVWWLVAAAALGIPLVVTAMPEFGMFGVGAIAAAVTAGLGAGVVAQVLVFVIVSVALIAVVRPIAARHRAQQPHMASGVDALKGRQAVVLERVDGSGGRIKLAGEVWSARALDTGRAFEAGEEVDVVEIDGATAVVM
>NZ_CP036534.1|WP_031047585.1|1624572_1625514_-|SPFH/Band-7/PHB-domain-protein
MEPVIIVLIILVVLVFIALIKTIQVIPQASAAIVERFGRYTRTLNAGLNIVVPFIDTIRNRIDLREQVVPFPPQPVITQDNLVVNIDTVIYYQVTDARAATYEVASYIQAIEQLTVTTLRNIIGGMDLERTLTSREEINAALRGVLDEATGKWGIRVNRVELKAIEPPTSIQDSMEKQMRADRDKRAAILQAEGVRQSEILRAEGEKQSQILRAEGEAKAAALRAEGEAQAVRTVFEAIHAGDPDQKLLSYQYLQMLPKIAEGDANKLWIVPSEIGDALKGLSGAMGNIPGLGGGNGGASVPAQERREKPSID
>NZ_CP036534.1|WP_031047582.1|1623914_1624421_+|HNH-endonuclease
MRDTLVLNASFEPLSTVTLNRAVVLVLQDKAVVEQAHPSLRMRGAALDIPAPRVIRLCQYVRVPFRRRAPWSRRGVLVRDRHRCAYCGRRATTVDHVVPRSHGGQDTWLNTVASCAQDNHRKANRTPEQAGMPLLRQPFEPTPADAMLLALARDDFAALPEWLALEAA
>NZ_CP036534.1|WP_031047577.1|1623174_1623714_+|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MTELKRRPLPHDFHPPVPSFTVTSEDVREGGTLKDAQVHAAGNTSPQLRWEGFPAETKSFAVTCYDPDAPTGSGFWHWVVFDIPASVTELPVGAGSGTFEGLPEGAVQARNDYGGKEFGGAAPPAGDGPHRYVFTVYAVDQEKLGPDADGTPAFVGFNLRFHTIARAQLIGEYEVPAEG
>NZ_CP036534.1|WP_166623814.1|1632880_1633579_+|transglycosylase-SLT-domain-containing-protein
MLKNILPRGRSRSLNRTQKAAIAGVGTLGAAAVALTAVPASGQSTTSEAAPTAKVEYSTKQIKDVDAGVTGRLAGASQKVAAIDAKKEAASNKATTAKKAVEKHETKKSTSRSAERTEVKKAAKSYPDNLDGWIREARAILSKHDIPGTYDGIHRNIIRESSGNPKAINDWDINAINGIPSKGLLQVIPPTFKAYHVPGTSWDIYDPVANIAAACNYAADKYGTMDNVDSAY
>NZ_CP036534.1|WP_070387734.1|1633703_1636280_-|FHA-domain-containing-protein
MPELVLESNGQTWTLDPSRSYALGRDPQGELVFDDARVSWRHATISFNGRSWVVEDHGSTNGTFVHGQRVQQMELGAGTVLNLGNATDGPRVSLTGAQAAVGTPQAQPQQQPYAAQGANAGWAQQAPVQEPPQQAAQHGHPHQAPQPGWQQQPQQQAAPQPQQAAAHFPQQQGPGGAAGAPPAHGDRSPTTFHQFSLGRVMRIGRALENELVVSDLQVSRNHAEFHATPDGRMEIRDLGSHNGTYVNGLPIAKGGSQLLGPTDIVGVGHSTFRIVGDRLEEFVDTGEVSFSARHLTVTVDGGKQILKDVSFGVPEKSLIAVIGPSGSGKSTLLKALTGYRPADQGEVLYDNRNLYKQFAELRQRIGLVPQDDILHKELTVKKALKYAAKLRFPADTTAAERDSRIDEVLRELKLDIHKDKKVTSLSGGQRKRVSVALELLTKPSLIFLDEPTSGLDPGMDRDVMQLLRGLADDGRTVLVVTHSVAELATCDKLLVMAPGGSVAYFGPPEEALNFFGYDTWADVFSAFENYRDYDWAGRWKGSQHYQMYAADIDAVAPQSVQVPAMQAMKPPKPQGWMSQFVTLVRRYVSVIVSDKGFLALTVILPAVLGAVSLLIDPDKGLLPNPANPQTGRIIPNGTATTVLLILAVGACFAGAANSVRELIKERVIYERERATGLSRSAYLMSKVFVLGTVTVLQGLLVGVIGFATREIPEEGLVLSGLPLVELSLPIMALGFTSMMFGLIISSLVKTAEKTMPLLVMFAIIQVVFTGCLFALNDAVGVNQFSYLMPSRWAVAAAGATLDFNKISPPEQGSEADPLWEHTVGAWGLDMAALIVLGVICGFFVARFLRRHEPEVMRK
>NZ_CP036534.1|WP_037770593.1|1636840_1638085_+|phosphoserine-phosphatase-SerB
MSATQTSDVPTLLVKIFGKDRPGITAALFDTLAAYSVDVVDIEQVVTRGRIVLCALVSEPPRGLEGDLRATVHSWAESLKLQAEIISGIGDNRPRGLGRSLVTVLGHPLTAEATAAIAARIAESGSNIDRIFRLAKYPVTAVEFAVSGAETEPLRTALATEAAALGVDIAVVAAGLHRRAQRLVVMDVDSTLIQDEVIELFAAHAGCEDKVAEVTAAAMRGELDFEQSLHARVALLAGLDASVVEKVRAEVRLTPGARTLIRTLKRLGYQVGVVSGGFTQVTDDLKERLGLDFAQANTLEIADGRLTGRVTGEIVDRAGKARLLRRFAAEAGVPLSQTVAIGDGANDLDMLNAAGLGVAFNAKPVVREAAHTAVNVPFLDTVLYLLGITREEVEAADTLDEDLGAGLGLPLDRV
>NZ_CP036534.1|WP_031047628.1|1638169_1638688_-|histidine-phosphatase-family-protein
MSVAEPRRIVLFRHAKADWPQVTDHERPLADRGRKDAAEAGRRLADTGVPFDQALCSTSARTRETWKLAVQEFPHRPKTVYEERIYEASPGELIAVLNETPDDLRNVLVIGHNPGMEGLAEILAGSAEDEARERMTGRGFPTAAFAVLTFTGDWKDVEPGRASLVDYWAPTD
>NZ_CP036534.1|WP_037770590.1|1638781_1639006_-|hypothetical-protein
MAVTTHTPPPRAPGADRTTGSGTETRLPWWALALPVLAFMTLLLLILNPADAQAAASPPGIVHLLEWLRQLILR
>NZ_CP036534.1|WP_037770637.1|1639386_1640685_-|CynX/NimT-family-MFS-transporter
MTGTRAEPGRAASTPSTSSPRAWTTWTTRLLMLGIVLAAFNLRPAITSLGALLEEVRDGLGMSGSVAGLLTSVPPLCFAVFGVMAPRLARRFGPGAVVWAGMVAITAGLLIRPYAGGTAGFLAATALALMGIAVSNVLMPVIVKRYFPDRVGSMTGLYSMALAFGTSIAAAATVPVTNALGGGWQPGLAVWATLGVAAVLAWIPFVRHREAPQSAPAPERTADTPGGRGAGPAPEQSPLRITRSRTAWALAVFFGLQATAAYITMGWMAQIFRDSGVSAGTAGLLLAVIMVMGVPLAFVIPRVATRLPHQGPIVLVLGLCGLAGYAGLYFAPVGGAWAWALLLGISNCAFPLALTMVGMRARTGAGVAQLSAFAQSTGYLISIPGPLLVGVLYQHSGGWGLPITLMCALMVPQIVVGVLAGRDRTVEDEAGR
>NZ_CP036534.1|WP_031047640.1|1640809_1641487_+|FadR-family-transcriptional-regulator
MPLSHPRRSALSEQVIAALRQQVASGEWPVGTRIPTEPELVEQLGVARNTVREAVRALAHNGLLDIRQGSGTYVVATSELAGVMQRRFADTDPRHIAELRSTLESAAARLAAERRTEKDLKQLDALLVRREEAFETGDTEAFVTADANFHLAVVAASHNDAMTAMYADLDEVMRDWLRGDVGSELTPDAHMDHTRLVDAIRAGDAETARREAADYPFLCRPGPVG
>NZ_CP036534.1|WP_031047643.1|1641585_1642353_-|enoyl-ACP-reductase-FabI
MSGILEGKRVLITGVLMESSIAFHAAKLAQEQGAEIILTAFPRPTLTERIAKKLPKPTKVIELDVTNDEHLGRLADVVGEELGGLDGVVHSIGFAPQDALGGNFLNTPFESVATAMHVSAYSLKSLTMACLPLMQNGGSVVGLTFDAQYAWPQYDWMGPAKAALEATSRYMARDLGKQKIRCNLVSAGPIGSMAAKSIPGFADLASVWDSRSPLEWDLKDPDPAGRGIVALLSDWFPKTTGEIIHVDGGLHAIGA
>NZ_CP036534.1|WP_031047646.1|1642358_1643063_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MSRSVLVTGGNRGIGLAIARAFADAGDNVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEVEEAHGPVEVLIANAGINKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRGMLRAKKGRVVLISSVVGLLGSAGQANYAASKAAMVGFARSLARELGSRNLTFNVVAPGFVDTDMTRELSEEQQAKILAQVPLGRLARSEEIAATVRFLASDDASYITGAVIPVDGGLGMGH
>NZ_CP036534.1|WP_078536047.1|1643239_1643740_-|ATP-binding-protein
MFAQRFSATRRGARLARRLATHQLDLWHLPYDSPASDTITLVVSELAANAALHGCVPGRDFELRLVYDRSAGLVRVEVSDTHPELPAPTARPAADDEGGRGLLLVAAVADRWGVERRTGPGKTVWAECTVVKPVTVADRPGMPHCQVVEGVDPPALLLAEREDDRR

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Crispr_ID: NZ_CP036534_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_3

1972161-1972241

Orphan

Consensus_repeat	Method
GGGCTCGGCCGGGCGGTGGTCCGGCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036534_3

>merge|NZ_CP036534|3|1972161-1972241|CRISPRCasFinder
GGGCTCGGCCGGGCGGTGGTCCGGCGGGAGGGCGGGCCGGAGGTGGGTCGCATGGGCTCGGCCGCGCGGTGGTCCGGCGGG

>NZ_CP036534|3|3|1972161-1972241|CRISPRCasFinder
GGGCTCGGCCGGGCGGTGGTCCGGCGGG	AGGGCGGGCCGGAGGTGGGTCGCAT
GGGCTCGGCCGCGCGGTGGTCCGGCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_031030866.1\|1963718_1964366_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP036534.1\|WP_031030848.1\|1969170_1970124_-\|ROK-family-glucokinase	unknown	unknown	gnl\|CDD\|273246
NZ_CP036534.1\|WP_166623906.1\|1970178_1970760_-\|DUF5304-domain-containing-protein	unknown	unknown	gnl\|CDD\|375065
NZ_CP036534.1\|WP_031030823.1\|1981144_1982188_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP036534.1\|WP_037764437.1\|1968309_1969074_-\|endonuclease	unknown	unknown	gnl\|CDD\|197318
NZ_CP036534.1\|WP_166623905.1\|1967481_1968168_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_107060424.1\|1984341_1985019_+\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759
NZ_CP036534.1\|WP_166623908.1\|1974044_1975841_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341233
NZ_CP036534.1\|WP_166623907.1\|1970817_1972050_-\|ArsA-family-ATPase	unknown	unknown	gnl\|CDD\|223082
NZ_CP036534.1\|WP_166623909.1\|1975887_1977030_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP036534.1\|WP_070387856.1\|1978541_1979741_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031030840.1\|1972368_1972803_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176861
NZ_CP036534.1\|WP_166625929.1\|1972913_1973669_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277338
NZ_CP036534.1\|WP_166623903.1\|1964463_1965714_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP036534.1\|WP_166623910.1\|1979860_1980877_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366353
NZ_CP036534.1\|WP_037764761.1\|1965757_1966534_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP036534.1\|WP_070387848.1\|1962638_1963667_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|274155
NZ_CP036534.1\|WP_031030822.1\|1982445_1983789_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|377585
NZ_CP036534.1\|WP_166623904.1\|1966685_1967489_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NZ_CP036534.1\|WP_031030820.1\|1983851_1984091_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_031030866.1\|1963718_1964366_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.72342e-63
NZ_CP036534.1\|WP_031030848.1\|1969170_1970124_-\|ROK-family-glucokinase	gnl\|CDD\|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	5.22534e-163
NZ_CP036534.1\|WP_166623906.1\|1970178_1970760_-\|DUF5304-domain-containing-protein	gnl\|CDD\|375065	pfam17230, DUF5304, Family of unknown function (DUF5304). This family of unknown function is found in Actinobacteria.	1.22546e-61
NZ_CP036534.1\|WP_031030823.1\|1981144_1982188_-\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.35283e-32
NZ_CP036534.1\|WP_037764437.1\|1968309_1969074_-\|endonuclease	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	1.46113e-19
NZ_CP036534.1\|WP_107060424.1\|1984341_1985019_+\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	1.74424e-25
NZ_CP036534.1\|WP_166623908.1\|1974044_1975841_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341233	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases. This family includes long-chain fatty acid (C12-C20) CoA synthetases and Bubblegum-like very long-chain (>C20) fatty acid CoA synthetases. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Drosophila melanogaster mutant bubblegum (BGM) have elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene later named bubblegum. The human homolog (hsBG) of bubblegum has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	0
NZ_CP036534.1\|WP_166623907.1\|1970817_1972050_-\|ArsA-family-ATPase	gnl\|CDD\|223082	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning].	4.92505e-38
NZ_CP036534.1\|WP_166623909.1\|1975887_1977030_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.23179e-69
NZ_CP036534.1\|WP_166623910.1\|1979860_1980877_-\|hypothetical-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	8.64028e-31
NZ_CP036534.1\|WP_031030840.1\|1972368_1972803_-\|SRPBCC-family-protein	gnl\|CDD\|176861	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	3.45551e-55
NZ_CP036534.1\|WP_166625929.1\|1972913_1973669_-\|metallophosphoesterase	gnl\|CDD\|277338	cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.53367e-17
NZ_CP036534.1\|WP_166623903.1\|1964463_1965714_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.43327e-22
NZ_CP036534.1\|WP_037764761.1\|1965757_1966534_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.71344e-50
NZ_CP036534.1\|WP_070387848.1\|1962638_1963667_-\|6-phosphofructokinase	gnl\|CDD\|274155	TIGR02483, ATP-dependent_6-phosphofructokinase_1, phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal. [Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_CP036534.1\|WP_031030822.1\|1982445_1983789_-\|RNA-binding-protein	gnl\|CDD\|377585	pfam05991, NYN_YacP, YacP-like NYN domain. This family consists of bacterial proteins related to YacP. This family is uncharacterized functionally, but it has been suggested that these proteins are nucleases due to them containing a NYN domain. NYN (for N4BP1, YacP-like Nuclease) domains were discovered by Anantharaman and Aravind. Based on gene neighborhoods it was suggested that the bacterial YacP proteins interact with the Ribonuclease III and TrmH methylase in a processome complex that catalyzes the maturation of rRNA and tRNA.	5.33442e-14
NZ_CP036534.1\|WP_166623904.1\|1966685_1967489_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	1.85025e-40

>NZ_CP036534.1|WP_166623907.1|1970817_1972050_-|ArsA-family-ATPase
MRTLLLTGPGGTGRTTLAAATALAAARQGTRTLLLGTDRDDTLGAALGMRTGPAPALVEPRLTVWRPDPAQGFRDGLAALQDRAASALDLLGAARLDPEELTPLPGADDLALLRALREAALAEAHDLLVVDLPAAPRALALLAAPEELRRCLRRLLPPERQAARALRPVLGRLAGVPLPTGALYETAARWELELAATEAVLADRNTVVRLVAEPGPAGADAVRTAALGLALRGLRTDLLVANRVLPEDVPADSWLGGPLAQQRKALAEWQGTYDVRTVPHLGRDPRGTDDLAALGAPGAAPGAVPDAAPGARPGAAPGADAHAAPVEWTVTDRLAEDGVLVWSIPLPGAVREELDLVRRGDELAVAAGPFRRTVPLPSALRRCTVDGAALRGDTLTVRFTPDPGLWPRGR
>NZ_CP036534.1|WP_166623906.1|1970178_1970760_-|DUF5304-domain-containing-protein
MSEELPPSEAPRPDAADGADGAGAARAADETRAADETRAADADAWATACAEDLEAEKARRRAEYGPPPGSAAEELRRLVDTVADKLSGLQSPLLGQVAGPAAQQVVRQVVQQAKAAVEPVIERNPDVFDHLAAAGGELLAAYRSAVQNQERRWTTGDTAAKDSRDPRDQEERGDDGRDEGDGGTGPGQRIDLD
>NZ_CP036534.1|WP_031030848.1|1969170_1970124_-|ROK-family-glucokinase
MGLTIGVDIGGTKIAAGVVDEEGNILSTHKVPTPTTPEAIVDAIASAVEGARVGHEIVAVGIGAAGYVNRQRSTVYFAPNIDWRQEPLKEKVEARVGLPVVVENDANAAAWGEYRFGGGKGHRNVICITLGTGLGGGIIIGNKLRRGHFGVAAEFGHIRMVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPERAEVLLALGDGTPEGIEGKHISVAARQGCPVAVDSYRELARWAGAGLADLASLFDPSAFIVGGGLSDEGDLVLDPIRKSYKRWLVGGNWRPVADVIAAQLGNKAGLVGAADLAREPDPIM
>NZ_CP036534.1|WP_037764437.1|1968309_1969074_-|endonuclease
MATSSLSPLPNSRTEPDGSAVVRVLSYNVRSMRDDTDALARIVTACAPDLVLLQEAPRLFRWRKKITRLAAASGLVLLSGGGTAAGPALLCSLRATVERTEDVLLPLTPGRHRRGLAAAVVRIGGARLGVLSTHLSLSADERHEQAGLLLDHLAALGVTHAVAGGDLNEPPGGRTFRRLGEGLRDCWTAAPWGGEYTFPATAPDRRIDAVFVTEDVEVLGCGVPSGLPGVAEDDLRTATDHLPVLTALRVPATT
>NZ_CP036534.1|WP_166623905.1|1967481_1968168_+|hypothetical-protein
MAEHDSDREDREEREREHGEGGRERAADRGPEDGGTPVDEEAAWAAIVAGYGEEPPDPPGAKPFKSIEDLALLEPETNDMNGTASTTRTTGTTGPDGTDDADDEKPGADRSVPARPLGGSVAFAPGVGPRDHTPAEPSDDDFDADDEGHFVPPEPPPLPEGDTTSRFAWLGVLGGPVLLLLAVVLGWDMTWWLATLSIGGFLGGFATLVVRMRTGDEDDDDPGRGAVV
>NZ_CP036534.1|WP_166623904.1|1966685_1967489_+|alpha/beta-fold-hydrolase
MPVLPGAEPFRHEGGEVGVLLCHGFTGSPQSLRPWARYLAAHGLSVALPLLPGHGTRWQDLQVTGWQDWYAEVDRELRALRERCTRVFVAGLSMGGALALRLAAKHGDAVTGVVVVNPANRMHGVAQHALPVLRHLVPATKGIASDIAKHLGSELGYDRVPLHSAHSLRAFFRLADGDLPQVTQPLLLLRSPQDHVVPPADSARILGRVSSTDVTEILLEQSYHVATLDHDADRIFAESIAFIGRLAPGSVGEPESGLGKEGTAAGG
>NZ_CP036534.1|WP_037764761.1|1965757_1966534_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MKVTVGGSLKLAFRPWVEGLEHIPADGPAILASNHLSFSDSFFLPAVLDRKVTFIAKAEYFNTPGVKGRLTAAFFKGVGQLPVDRSGARGAGEAAIKSGIEVLERGELFGIYPEGTRSPDGRLYRGKPGGLARVALATGAPVLPVAMIDTEKIQPPGQVMPKLMRPGIRIGKPLDFARYQGMEHDRFVLRAVTDEVMYEIMKLSGQEYVDMYATAMKRQLAEAAKAEKAEKDAAKEAAKEAAKEADRAAKDAESRTGG
>NZ_CP036534.1|WP_166623903.1|1964463_1965714_-|sensor-histidine-kinase
MARRERVMRMSVEQPLWRALAGYRVLTMLYAIGFFATAYSGFERPWLAVAYYAVLSVWTLATLPKVANAASCTKRFLAADLTIALAGVLLTPFADAHDRVMDGGPTLPSIWTAGSVLAFAIKGGWRWAAAASTLVAVANLVERGTPARDTVHNVVLVWVASIAIGYVVEVARASERTLARALEIEAATRERERLARDIHDSVLQVLAMVQRRGAVIGGEAAELGRLAGEQEVALRTLVSGGLVPVSRVSEDTAEGAVVRAVDEPEGPEGEFPDGPVDLRALLAPYAGSLVNLAEPGAPVELDPASARELAAAVGAALDNVRRHVGERARAWILVEDEPGEVIVTVRDEGPGIPEGRLAEAEGEGRLGVALSIRGRLRDLGGTAELISVPGQGTEVELRAPKETGGVAARGKAADHG
>NZ_CP036534.1|WP_031030866.1|1963718_1964366_-|response-regulator-transcription-factor
MVVDDHPMWRDAVARDLAESGFDVVATAGDGDQAVRRARAVTPDVLVLDLNLPGKPGVQVCKEVVGADPKLRVLVLSASGEHADVLEAVKSGATGYLLKSASTEELRDAVRRTAVGDPVFTPGLAGLVLGEYRRLASEPAPAAGGDEPGAPRLTDRETEVLRLVAKGLSYKQIAERLVISHRTVQNHVQNTLGKLQLHNRVELVRYAIERGLDDA
>NZ_CP036534.1|WP_070387848.1|1962638_1963667_-|6-phosphofructokinase
MKVGVLTGGGDCPGLNAVIRAAVRKGVQEYGYDFTGFRDGWRGPLEGDTVLLDIPAVRGILPRGGTVLGSSRTNPLQQEGGIRRIKDNLAELGVEALITIGGEDTLGVAACLAQEYGVPCVGVPKTIDNDLSATDYTFGFDTAVGIATEAIDRLHTTAESHMRVLVVEVMGRHAGWIALHSGLAGGANAILIPEQPFDVEQVCGWVTSRFRASYAPIVVVAEGAVPRDGDMVLKDESLDSYGHVRLSGVGEWLAKQIEKRTGKEARTTVLGHVQRGGTPSVFDRWLATRFGLHAIDCVRDGDFGKMVALRGTDIVRVPIADATARLKTVDPALYDEVGVFFG
>NZ_CP036534.1|WP_031030840.1|1972368_1972803_-|SRPBCC-family-protein
MAEHTSSSITIDAAPADVMEVIADFARYPDWTGEVKEAQVLASDAQGRAEQVRLVMDAGAIKDDQTLAYTWTGEHEVSWTLVKSQMLRSLDGSYLLRAEGKGTEVTYRLTVDVKIPMLGMIKRKAEKVITDRALAGLKKRVETK
>NZ_CP036534.1|WP_166625929.1|1972913_1973669_-|metallophosphoesterase
MVSDVHGNARDLARAGEGADALVCLGDLILFLDYADHSRGIFPDLFGVENADRLVELRTARRFDEARELGSRLWSGVDGDKAQLIEGAVRRQYAELFAAFPTPTYATYGNVDMPPLWPEYAGPGTTVLDGERVEIGGRVFGFVGGGLRTPMRTPYEIGDEEYAAKIEAIGEVDVLCTHIPPQVPELVYDTVARRFERGSKALLDAIRRTRPRYALFGHVHQPLARRMRVGATECVNVGHFASTGRPWVMEW
>NZ_CP036534.1|WP_166623908.1|1974044_1975841_+|long-chain-fatty-acid--CoA-ligase
MREFSLPALYEVPADGNLTDIVRRNAAQHPDVAVIARKVEGAWQDVTARTFLAEVHSAARGLIASGVQPGDRVGLMSRTRYEWTLLDFAIWSAGAITVPVYETSSPEQVQWILGDSGATALVVESAEHAAAVESVRERLPALKNVWQIDAGAVEELGRLGQDVTDRAVEERGSIAKADDPATIVYTSGTTGRPKGCVLTHRSFFAECGNVVERLRPLFRTGECSVLLFLPLAHVFGRLVQVAPMIAPIKLGNVPDIKNLTDELAAFRPTLILGVPRVFEKVYNSARAKAQADGKGKIFDRAADTAIAYSKALDTPTGPSVGLRIKHKVFDKLVYGKLRTVLGGRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATAFNPWDRQKIGTVGQPLPGSVVRIADDGEVLLHGEHLFKEYWNNPGATAEALADGWFHTGDIGTLDEDGYLRITGRKKEIIVTAGGKNVAPAVIEDRIRAHALVAECMVVGDGRPFVGALVTLDEEFLDRWCAEHGKPAGSTAAALREDPDLLAAVQGAIDDGNAAVSKAESVRKFRVLGSQFTEESGYLTPSLKLKRNVVAKDYADEIEAIYAK
>NZ_CP036534.1|WP_166623909.1|1975887_1977030_-|glycosyltransferase-family-4-protein
MRKTLIVTNDFPPRPGGIQAFLHNMALRLDPERLVVYASTWKRSREGVEATAAFDAEQPFTVVRDRKTMLLPTPGATRRAVGLLREHGCTSVWFGAAAPLGLMAPALRKAGAERLVATTHGHEAGWAQLPAARQLLRRIGESTDTITYLGEYTRSRIAGALTPEAAARMVQLPPGVDEKTFHPGSGGDEVRARLGLTERPVVVCVSRLVPRKGQDTLIRAMPRILAAEPDAVLLIVGGGPYEKDLRRLAHDTGVAASVHFTGAVPWPELPAHFGAGDVFAMPCRTRRGGLDVEGLGIVYLEASATGLPVVAGDSGGAPDAVLDGETGWVVRGEDPDETADRVTTLLADPELRRRMGERGRWWVEEKWRWDLLAEQLKTLL
>NZ_CP036534.1|WP_070387856.1|1978541_1979741_-|hypothetical-protein
MAGRRRVSGSSVVALCLLLVALVACGGRPGADPVRADVQRLLDRRAAAVLAHDAAAYARTGTGTGTGFGNLSAIPVADWSYRVSEVDRAGDSATAEVELRYRVEGYDRGAVATARTLRLSRDGTGGQWSVDSERPAEKSGQQPWDQGAVEVVRGARSLVLGVGQSTAALRGYAGLADRAVPAVSDAWDGAWARRVVVVVPRSVEGMAGLLGSPASSYRGIAAVTTGETGGREHAPADRVIVNPDAYGLLGDLGKQVVLTHETTHVATRADTTSATPLWLSEGYADWVGYRDTARGPAQSAPELTRAVLDGGVPGRLPTDDDFGFTADADELARAYESGWLACRMIAAQWGEDRLNAFYRAVGAHDERAGAVEEAMDEVLGTTPEEFTRQWQDYLRTELG
>NZ_CP036534.1|WP_166623910.1|1979860_1980877_-|hypothetical-protein
MGSHRRLAPSGFDRGSTAAVGLLSVAAAVLGAVPATAAPHEDRRAEVDRLYTEAERATEAYNKADARTDALRKEVGTAQDSIARQQQRVNTMRDALGSLAGAQYRSGGIDPALALLLSADPDDYLDRASVLDRVTTRQAGELRELQQAVRDLSQDRAEAARKLAELEKGRKAVAAHKKTVEGKLAKARKLLNALPDEDRADRARASRSGRADLTALTGAGAPASGRAAAALAAARSALGKPYIWGANGPSGFDCSGLTQWSYAQAGVGLPRTSQAQSGTGRRVSLAEARPGDLVAYRDDASHIGMYAGNGQVIHAPRPGAPVRYDPVGMMPISSINRV
>NZ_CP036534.1|WP_031030823.1|1981144_1982188_-|C40-family-peptidase
MASHRRPKQPSRTRVTVLTTAAAAAVALSSQAANAAPSEKPSKDEVKAKVDKLYEEAEQATEKYNGAKEKQEKLQKEVSTIQDNVARGQEDLNALRDGLGSMASAQYRSGGIDPSLQLFLSADPDDYLDKASTLDQLSGQQVEALKKIQEKQRELSQQRSEASEKLKDLSATRTELGNKKKQVQGKLSEAQKLLNTLTAQERAALKKEETQRATRAGERAGLGGSGTPASGRAAAAFAAAQSKIGTPYVYGATGPSSFDCSGLTSWAYAQAGVGIPRTSEAQTGAGTRISSMGDLQVGDLVFFFNDLHHVGLYAGNGQVLHAPRTGTVVRYESMSTIGGPFMFGVRV
>NZ_CP036534.1|WP_031030822.1|1982445_1983789_-|RNA-binding-protein
MVETQGGEPGDGAAEVLDRPLPDGVRRRVVQIVSDGFGSLTLGELPAQLRQYARFTPSRRVKFAGNAMAAAVETDPLFRGRIGDKLRDAQPELAGALDAGSPPPAADPLDVAAAAYVLRPHGWVKLVTAAGEEAQRADAERADDESRAELERLHEELARAREHTRAETERLRTELDAARRETEALHRKLRSALSDVKRGEAALRKVQAEMDTVRAEGQTQVSAAESETRRLKARLGEAEAALEATRKAAREGRSVEDMRVRLLLDTLLDATQGLRRELALPPVSARPAETVDAVEPGRMTPKDIANRALSEHDPAVLDQLLALPQAHLVVDGYNVTKTGYPQMPLEKQRLRLLGQLSQLAAQTGAETTCVFDGAELAAPVLLAPPRGVRVLFSKPGVTADELIRQLVRAEPPGRPVIVVSTDREVADGVARAGARPVASVVLLKRVS
>NZ_CP036534.1|WP_031030820.1|1983851_1984091_-|hypothetical-protein
MTVPLPTDTTRWRCTLCGNLTRFDVTRASKVVEYVHLDLAGEPKVEEREVLSETIESVRCRWCNAVDQVELVDRPGAAS
>NZ_CP036534.1|WP_107060424.1|1984341_1985019_+|rhomboid-family-intramembrane-serine-protease
MTYTLITLCCLLFLISPAAGLNPAYGTGEELLAAQRAHFHRWGVIPAELFEDSPGSALTPATALFVHGSWVHLLGNMLFLYVFGAMTEERMGRLQFALFYLGCGYLALVGYAGANAHSQESLVGASGAISAVLGAFLFLFPHARVTSLLPFLFFLPLRFPAWLVLPFWAALQWMAAGRAGDGPGVAYLAHLVGFGLGFVFAWVRFGRTTRVESVPVAAPEGENQP

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Crispr_ID: NZ_CP036534_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_4

2214005-2214099

Orphan

Consensus_repeat	Method
TACAGCAGCGACCAGGGCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036534_4

>merge|NZ_CP036534|4|2214005-2214099|CRISPRCasFinder
TACAGCAGCGACCAGGGCGGCGACTGCATAGAGTGCGCGCCGCTCGGTCCGCTGGCCTGGCGCAAGTCGTCGTACAGCAGCGACCAGGGCGGTGA

>NZ_CP036534|4|4|2214005-2214099|CRISPRCasFinder
TACAGCAGCGACCAGGGCGGCGA	CTGCATAGAGTGCGCGCCGCTCGGTCCGCTGGCCTGGCGCAAGTCGTCG
TACAGCAGCGACCAGGGCGGTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_037765519.1\|2224320_2224986_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319829
NZ_CP036534.1\|WP_166625936.1\|2212628_2213000_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP036534.1\|WP_166623990.1\|2208354_2209422_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166625935.1\|2209629_2210925_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237512
NZ_CP036534.1\|WP_166623997.1\|2221438_2222206_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215533
NZ_CP036534.1\|WP_166623994.1\|2215952_2218061_-\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|379588
NZ_CP036534.1\|WP_078535853.1\|2222370_2222907_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP036534.1\|WP_166623991.1\|2211155_2211740_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|368218
NZ_CP036534.1\|WP_166623996.1\|2220920_2221433_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP036534.1\|WP_166623993.1\|2214331_2215999_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166623992.1\|2211962_2212619_+\|M15-family-metallopeptidase	unknown	unknown	gnl\|CDD\|350618
NZ_CP036534.1\|WP_037765484.1\|2206436_2207123_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031046866.1\|2204465_2204840_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP036534.1\|WP_166623995.1\|2218501_2219932_+\|glycine-betaine/L-proline-transporter-ProP	unknown	unknown	gnl\|CDD\|340924
NZ_CP036534.1\|WP_037765488.1\|2207707_2208355_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_037765497.1\|2213148_2213997_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP036534.1\|WP_070387955.1\|2205164_2206133_-\|peptidase-M19	unknown	unknown	gnl\|CDD\|366534
NZ_CP036534.1\|WP_070387961.1\|2220502_2220910_+\|DUF1992-domain-containing-protein	unknown	unknown	gnl\|CDD\|378159
NZ_CP036534.1\|WP_031046815.1\|2220018_2220411_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238017
NZ_CP036534.1\|WP_166623998.1\|2223029_2224232_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_037765519.1\|2224320_2224986_-\|HAD-family-hydrolase	gnl\|CDD\|319829	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). This subfamily includes Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). GPP1p and GPP2p are involved in glycerol biosynthesis, GPP1 is induced in response to both anaerobic and hyperosmotic stress, GPP2 is induced in response to hyperosmotic or oxidative stress, and during diauxic shift; overexpression of DOG1 or DOG2 confers 2-deoxyglucose resistance. These belong to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.70046e-73
NZ_CP036534.1\|WP_078535853.1\|2222370_2222907_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.14354e-14
NZ_CP036534.1\|WP_166625935.1\|2209629_2210925_-\|hypothetical-protein	gnl\|CDD\|237512	PRK13800, PRK13800, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	6.10736e-07
NZ_CP036534.1\|WP_166623997.1\|2221438_2222206_-\|hypothetical-protein	gnl\|CDD\|215533	PLN02983, PLN02983, biotin carboxyl carrier protein of acetyl-CoA carboxylase.	0.00962327
NZ_CP036534.1\|WP_166623994.1\|2215952_2218061_-\|DUF2029-domain-containing-protein	gnl\|CDD\|379588	pfam14378, PAP2_3, PAP2 superfamily.	3.06074e-44
NZ_CP036534.1\|WP_166623991.1\|2211155_2211740_+\|DinB-family-protein	gnl\|CDD\|368218	pfam04978, DUF664, Protein of unknown function (DUF664). This family is commonly found in Streptomyces coelicolor and is of unknown function. These proteins contain several conserved histidines at their N-terminus that may form a metal binding site.	2.57788e-43
NZ_CP036534.1\|WP_166623996.1\|2220920_2221433_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.25081e-05
NZ_CP036534.1\|WP_166625936.1\|2212628_2213000_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	2.21028e-13
NZ_CP036534.1\|WP_166623992.1\|2211962_2212619_+\|M15-family-metallopeptidase	gnl\|CDD\|350618	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes. This subfamily of D-Ala-D-Ala dipeptidase (also known as D-alanyl-D-alanine dipeptidase vanX; VanX; EC 3.4.13.22) also includes several uncharacterized proteins. This is a Zn2+-dependent enzyme that mediates resistance to the antibiotic vancomycin in Enterococci and other bacteria (both Gram-positive and Gram-negative). It is part of a gene cluster that affects cell-wall biosynthesis. The operon triggers the termination of peptidoglycan precursors by D-Ala-(R)-lactate instead of D-Ala-D-Ala dipeptides. The enzyme is stereospecific, as L-Ala-L-Ala, D-Ala-L-Ala and L-Ala-D-Ala are not substrates. It belongs in the MEROPS peptidase family M15, subfamily D.	2.29268e-60
NZ_CP036534.1\|WP_166623998.1\|2223029_2224232_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	3.66093e-11
NZ_CP036534.1\|WP_031046866.1\|2204465_2204840_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.73413e-13
NZ_CP036534.1\|WP_166623995.1\|2218501_2219932_+\|glycine-betaine/L-proline-transporter-ProP	gnl\|CDD\|340924	cd17366, MFS_ProP, Proline/betaine transporter of the Major Facilitator Superfamily of transporters. This subfamily is composed of Escherichia coli proline/betaine transporter, also called proline porter II (PPII), and similar proteins. ProP is a proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in the bacterial osmoregulatory response. The ProP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0
NZ_CP036534.1\|WP_037765497.1\|2213148_2213997_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	1.47629e-08
NZ_CP036534.1\|WP_070387955.1\|2205164_2206133_-\|peptidase-M19	gnl\|CDD\|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	2.25099e-89
NZ_CP036534.1\|WP_070387961.1\|2220502_2220910_+\|DUF1992-domain-containing-protein	gnl\|CDD\|378159	pfam09350, DUF1992, Domain of unknown function (DUF1992). This family of proteins are functionally uncharacterized.	9.40925e-20
NZ_CP036534.1\|WP_031046815.1\|2220018_2220411_-\|FHA-domain-containing-protein	gnl\|CDD\|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	0.00425647

>NZ_CP036534.1|WP_037765497.1|2213148_2213997_+|helix-turn-helix-domain-containing-protein
MTHINVLDPGASPLDYYGFELRRHREAAGLTQRQLGDIVNYTGSLVGQIETARKVPTPEFSERVDAALGTGGLLSRLVDLVMRSQVPAWFQQVAELEARAVEICTFQTHMVHGLLQTDAYVRAVLGTLDPTDLDDRTAVRLARQRIFEKEKPPVFWAVLSEGALHQEIGGRETMHGQLDHLLALETNPRINVQVLPYSVGAHPGLTGAFTLFRFTKDPAILYTERYGSGHPTASPESVSDCSLRYDHLRAAALSLKDSAELIRRVMEERYGEQRDTDDKPVA
>NZ_CP036534.1|WP_166625936.1|2212628_2213000_-|ATP-binding-protein
MSFTAGAHSARHVRRIVTSYLGAWGLAELSDAVELGVTELLANVVRHVPDRRCTLLLLRQADGAGVRAEVSDGSPRLPLRTAHVSDDAECGRGLVLLDAVADRWGVVMRPEGGKTVWFECGGS
>NZ_CP036534.1|WP_166623992.1|2211962_2212619_+|M15-family-metallopeptidase
MTEIILMSDPKVAAVPVQECGEPLVDVRLDSPLLVDARKWQDSAGAFAHLREGVLTRLIEAQAQLPPGLRLLFVEGYRPPALQRHYFDKYATRLRTEHPDWSPDRIHSAASRYVSPPEIAPHSAGAAVDLTLTDADGNELDLGTRMNATPEESAGACYTQADNITAAARTHRTILATALTSAGLVNYPTEWWHWSYGDRYWAMETGAAAAHYGPKELS
>NZ_CP036534.1|WP_166623991.1|2211155_2211740_+|DinB-family-protein
MIDEFAKNNLHERLRRDRKALLWKLDGLSEYDARRPLTVTGTNLLGLVKHVAGVEARYFGEVFDRPSPQSLPRWQDHDGSDLWAAADETRDQIIEFYQRTWEHSDATIDELALDAPGRVPWWPEPYADTNLFAILVHVLGETNRHAGHADILREGLDGRTGMRPEHETQIDEDTRTAYCAKIEQAARSTASVKA
>NZ_CP036534.1|WP_166625935.1|2209629_2210925_-|hypothetical-protein
MAWHRPLFRPGREHSAPPPADLTQAGESQLALALCHRDGRIRQEAVRQSVRYPGLLPLVVIRCADWVGPVREHARRLLCEALDVDSALDLTPLVLRIGRRDRGAFGVDALGQVLRQASHGQLAVLFADPDRIIRRFAYRLAVEGRLLRPAELARAAAGDPDTVVQDLCATAALTAPGDEDAFAGVLPALLSARNPRVRSAGVTALRRAGRPKQAEPFLSDRSALVRACARYVVRQQGGDPVAWYRERCTAPDDPELPPGAVIGLAECGNRADAGLLQPLLAHPSAGVRARAVAGLRALDCANAEQLWPLLDDPAAGVVRETAAALLPSARELPADWLSERTSSERPRHVRVGAFRLLDACGGIVALRAAVGLLEDPDVKLRTWAAQSVQRWHPSPDGRRGDVEVGQLLDRSRHLFSDHMLRRRKWEAGVGS
>NZ_CP036534.1|WP_166623990.1|2208354_2209422_+|hypothetical-protein
MRFATRTSALLAAALSTLALSSTVAYAIGDDGAQAPPPSGPSGGASGSALTASATTTRIKVTQVSGGSTGDSAKPLAPIDPNWKPPACWYEPVATPEQLKDAVEQLKAGGDLVPVTPTLSWGEQLMVDHYEKGEAQTDGEGYENYNLGQDGQFWRGVINEGREDDPASYDCEHNLFWQNANTLPDDDHAPTPDILAAYAYDRINVPATEVELKPAARSTVNLPTWVWLDKATFQEVKVRADLEAAGVWAETTAKPVALHLEPGTEEAQTYPASGNCEINDDGSIGTPYTKGNADTTPPCGIRYLRSSTGRPYELKASLTWEIAWEGSGGANGNLPNGTFETTQDMTVQEIQAINR
>NZ_CP036534.1|WP_037765488.1|2207707_2208355_+|hypothetical-protein
MNRRPSLLAVTALTAVAALSLSACGSGDDSSSDGIKGADVAGGTGSASPSASASQGGVERPEITLPSEFRADFESWTNSDPKLQAILNDGREELRSKYAAVIEAKPDSEAVAFYNSDATLTSARKWIKQFTDDDDSLIGKVRIFDAQVHINDTGSGVLFYCVDEREASTKNRATGKVVDTPDKPESLLQYRVRLDETPQGVWKTAALTTVPGACS
>NZ_CP036534.1|WP_037765484.1|2206436_2207123_+|hypothetical-protein
MSSGDDRIWFLGNPWPDGHRIVEFEWDGWLDPDIGLRFTFELESADYNADDPPELEDDDDGDDEWGSSFESSKVVWRNYHRCSIRPAMGFVVGTPDEPLDFEVLASRTFRVDRPEDVAQLDDEDDLAFHIYLLGHDSVADHHIRFPATHAPFEFGLEWVGRIALTYIGDEEFKHRFQVRVGRATFRGFQVPDELDDEAADRLLTACVRDAARFRLSRDGGERRYVPVS
>NZ_CP036534.1|WP_070387955.1|2205164_2206133_-|peptidase-M19
MDGSRSRTVRLDAAGPELTPRALPTQLGRIRKGKLNTVLATVTALEPPQQAINAVNEWWKIDHALDRGARVATSVEKIRQTVAAGDLAVVLHFQGSAPLGGQVEMVDTYARLGVRVIQLTYNYAELAGDGCLEERNAGLTAFGRKIVHRMQNLGVTVDLSHAGERTCLETLSIAQRPAIISHGNARAVCDSPRNFSDEVIRAVAATGGVVGLCAFPAFVSSDPVPTLDQLINHAVHISDLVGAKHVGLGFDFADEDENDYDYFGYDERYYPRPPWTWPVGISWWEDAVNIAPALRRRGFSEEEVTGIMGENFMRAFEQTWNE
>NZ_CP036534.1|WP_031046866.1|2204465_2204840_+|helix-turn-helix-transcriptional-regulator
MNHSQWKTHRTRKLLGEQVEETPAYVDAGYAFALGQAVYDRRKELGLSQSELARRASMTQPQISNIEGGDSVPTLPLLTRLAKALDASLTIDLDGDSSTFAFRAHDDGDDGPEEIPPSGRSSAA
>NZ_CP036534.1|WP_166623993.1|2214331_2215999_+|hypothetical-protein
MVPAALTAPRTDQRRDRRASDALRAFGRRYRVPLLATLPTIPLYVVWWAFLATGGGDLAAQQAWADFASRHGGSAYGLFWYGGMHTANYSVISPYLMALVGVRTVTVVSGLAASWLAAVLFVRAGVRRPVWPALLASLALWCDVASGRTTFALGVAFALAACVPLVRERRLYLAAGYAALATLASPVAGLFLAVVGAAFLLVRDWRRALVLLIPPAAVVGLTTLFFPFTGEQPMPGARIWPPVVLGLAVIVLAPRTWRVARWSGAVYACGTVLTYLVASPVGTNVERFAELFAPAVLLAALLSGPPARTAAQSRRLLSRGLTGLLAVAVVYSAGWVGKKTVDDLRVSTVVPAWAAETDGVVRALDGLGADRTRVEVVPARNHREAARLAPHLNLARGWNRQLDVERARLFYDGSFSAATYREWLDHWAVGFVVLPLGRPDGPAEAEAALVRDSAQRPEWLEPVWQDAHWRVYRVRDAVPLVSAPGTVVNATGADLVLRVDRPGAVMVRVAWSPWLRSDGGCLAQEGEFTRLTVPAPGEYRLSSGYGPSPEAGDRC
>NZ_CP036534.1|WP_166623994.1|2215952_2218061_-|DUF2029-domain-containing-protein
MANAEHSGRPAESFGASAADATRARLRVARLGLWLVAAVLAARQLATVLGTPRGERLTDLETWVGEHGVLHVEGSLYESTQFTGTPFVGLVLKPFTRAAEQALGWGWTFGSLLLVVALGLVAARALPQPVGRRTALLAAPVAVSLLMLSLPVRNALWLGQTSIIPVLLVLLGCFAVRGAQGDRVGGVLIGVAAAFQPTVLLFVPLLWFTDRRRAAVSTGVTFAACTAIAWVAMAQDSYTYWVHHLAGVGLGGAADDLANQSLHGVLLRLGLSGPLEIALFLALGAAVAVLALRRAVRYARDGQLLLAVAVTGCAAVVVSPATWQHQLLWVLPAVVGRVGKKASDRYVWPVAVVLVMTLPAKMMLPDMAALYPLRDNVVLLAALAAAVAVPFLARTSPYFDTPLPTSYAPPVPTRFKHVPLLPFLRRVLTRPNLLLELLLIRVTYAAYSQVRLAATGGSNSAGRARAEDHGWQILDIERFLHLDIEHAINHAVVKVGWLRDFFDFYYTSFHFVVPLAVLGVLYWRRPVDYRWARASLGFATLLALVGFWLYPLAPPRLMPGLGIIDTVHGVQDFTKPDYGTLTHLTNQYAAMPSLHFGWSLWCGVAVAIIAPKMWMKALGLLHPLFTVLAIVATGNHWILDAVGGAAVVAAGFGLAYLFQGPRARTLTAAAAAQEPRRGDVSRDTGRDVSSDPPPPAKDRTPS
>NZ_CP036534.1|WP_166623995.1|2218501_2219932_+|glycine-betaine/L-proline-transporter-ProP
MRVRAPRPRRKQASEVLSAATVAAHHSSDHPSASPSAHHGSARPTATDPALVRRAVKAAALGNAMEWFDFGVYSYIAVTLGKVFFPSGSPTAQLLSTFGAFAAAFLVRPLGGVVFGPLGDRVGRQKVLALTMIMMAAGTFAIGLIPSYATIGVWAPVLLLVARLVQGFSTGGEYAGASTFIAEYAPDKRRGFLGSWLEFGTLAGYIGGAGLVTLMTALLSDGDLMSWGWRIPFLIAGPMGVIGLYLRMRLEETPAFAAELEKAETARPKVPLREMVTGQWRALLLCVGLVLVFNVTDYMLLSYMPSYLTSELEYDETHGLLVVLAVMALMMVVQPFAGALTDRVGRRPVIAAGCAGFLLLSVPALLLIRQGSLAAVGLGLAALGLLLVCFTASMPSALPALFPTRVRYGSLSIGFNVSVSLFGGTTPLVVTALIGATGNMMMPAYYMMAAAVVGGAAVWYMTESAGRPLPGSPPSR
>NZ_CP036534.1|WP_031046815.1|2220018_2220411_-|FHA-domain-containing-protein
MLELTMATVTAADEGATAGMQMADAPSEPDAVLRVGRDKSVCRLSTPDDWLFVSRVHLEFHCGPDGAWRLSWLRGSQADPSSEVRLTVGEHMQTLPYGGTVTLPRGGSGEVVVRDRVEPRSVNVGFYHEV
>NZ_CP036534.1|WP_070387961.1|2220502_2220910_+|DUF1992-domain-containing-protein
MTERKPPGVDFESWVDKQIRDADARGEFAELPGAGKPLPGELDSTYDELWWVRRKMAREGFSVLPPTLALRKEAEDALEAALDAPSERMARRIVEEVNVKIREVMFKPPPGPPLGKKPYDVEEVVRQWRERRAGR
>NZ_CP036534.1|WP_166623996.1|2220920_2221433_-|hypothetical-protein
MPDVTREPGTPTEPIPVTEPAPAAEPAPAAEPAPTTEPALDTEPDRAPEPPPVPESAPAVAPGTATGPGTASGPLLPREESDELGRRLHHAVTGFVDAPRASVEEADRVLEEIAARLTDAVARRRRDLRTSWQGTGERTGEEAAALGTDTEQLRLALRDYRELADRLAHA
>NZ_CP036534.1|WP_166623997.1|2221438_2222206_-|hypothetical-protein
MSTGVIIVLIVIVAAVLVVAAVLALRARGPQHGGSLKRRFGPEYDRAVVRHDGDTKAAERELSERVRRHGSLHTRPLEPAERERFEARWTAAQERFVDSPREAVGEADRLLAELAGARGYPDGAQYEEQLAALSVHHAHHVDGYRRVHRVTHAQAQTHTAGAGSGGAGTAAASDTEELREALVAARALFEQLVRPGRHDDGRPGTGARVAPAPAPAAASGPASAPGSTPESTPASEPAARAPHGWSLGKRRPKES
>NZ_CP036534.1|WP_078535853.1|2222370_2222907_+|GNAT-family-N-acetyltransferase
MDWTVAPEPYDSPVAAALWRAYYTEVSDRWYQLHEGRDTEPGELEREIAAQSGAELVPPRGVLLVARYAGEAVGTAGVRVLDATTAELTRVFLHKRARGRGGAALLVRAAEDAARALGAARVVLDTRGDLVEARALYARLGYTETEAYKEDPYSEHWFTKGLTTPSTGGVNQGNSDRI
>NZ_CP036534.1|WP_166623998.1|2223029_2224232_+|peptidoglycan-binding-protein
MEQQKEPSQQRPAGAPCPECGTPRAADHTPSCACGTRASEALRDARTAQAAAAEDFNPLRIRPYVELDGTEGPQGPPGAPGTPEPAEAAPDAPAPATEAPAADADATMTLRAVDAGAPPGAAAAEADPGPESGTGSEPSLPKPLAPSAGSPNARDLRLFETSATAPLPAVTARTDETGGGSDGGTGGARKPRRRRKGVLLSAAGTVAVVLGAAGFASGLFSYETPSRDGAAPDEVRAGVPDPSSTEATPDTEPSAPSAPPSASGSPGPSVSASAGAGAPESPSPSASAPSASSAPSRSAEPSPTASPTPTEQASQESGDDGPDFYAGPELRRGDQGPEVVELQQRLFKAGVYAGDHDGRYDRRVEESVRTFQWWRGIHSDESGVYGRETRQRLESETGDL
>NZ_CP036534.1|WP_037765519.1|2224320_2224986_-|HAD-family-hydrolase
MTATATTALPARALLLDMDGTLVNSDAAVERVWRRWADRQGLDGDEIMKVVHGRQGYASMALLLPDRPMEQNYADNARMLAEETADTEGVVEIPGAAAFLASLHGLPHALVTSADVALSTARMAAAGLALPDVRVTAESVGASKPDPEGFLKGAAELGIAPADCVAFEDSGAGIKAARAAGMRVVGVGPRAGFHGPDVVVEDLTRVRVEALGDGTLRLHIG

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Crispr_ID: NZ_CP036534_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_5

2320740-2320834

Orphan

Consensus_repeat	Method
TCCCAGGCCGAGGGCGAACGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036534_5

>merge|NZ_CP036534|5|2320740-2320834|CRISPRCasFinder
ACCCCGTCCCAGGCCGAGGGCGAACGCGACGAGGACCGGAACGGCACGGCGGACGTGCCGCACAGCACTCCCTCCCAGGCGGAGGGCGAACGCGA

>NZ_CP036534|5|5|2320740-2320834|CRISPRCasFinder
ACCCCGTCCCAGGCCGAGGGCGA	ACGCGACGAGGACCGGAACGGCACGGCGGACGTGCCGCACAGCACTCCC
TCCCAGGCGGAGGGCGAACGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_031033810.1\|2317933_2318992_+\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|336482
NZ_CP036534.1\|WP_037765627.1\|2311890_2312931_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP036534.1\|WP_166624026.1\|2358232_2362306_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372768
NZ_CP036534.1\|WP_166624022.1\|2310073_2311852_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP036534.1\|WP_031033819.1\|2322850_2323456_-\|SseB-family-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624021.1\|2309606_2310077_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP036534.1\|WP_037765629.1\|2319035_2320541_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP036534.1\|WP_070388003.1\|2362371_2362842_-\|type-VII-secretion-system-associated-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031033824.1\|2357219_2357609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_037765624.1\|2307839_2309210_+\|acetyl-CoA-carboxylase	unknown	unknown	gnl\|CDD\|223848
NZ_CP036534.1\|WP_166624019.1\|2306389_2307847_+\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|236096
NZ_CP036534.1\|WP_166624018.1\|2304898_2306302_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|115789
NZ_CP036534.1\|WP_166625941.1\|2323515_2327913_-\|lonely-Cys-domain-containing-protein	unknown	unknown	gnl\|CDD\|380151
NZ_CP036534.1\|WP_031033826.1\|2357610_2358066_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|376829
NZ_CP036534.1\|WP_031033835.1\|2362980_2363289_-\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|274862
NZ_CP036534.1\|WP_166624020.1\|2309272_2309419_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624025.1\|2322217_2322694_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP036534.1\|WP_051159631.1\|2320917_2321991_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236612
NZ_CP036534.1\|WP_031033838.1\|2363376_2363712_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223285
NZ_CP036534.1\|WP_166624023.1\|2312930_2317787_+\|protein-kinase	unknown	unknown	gnl\|CDD\|367616

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_031033810.1\|2317933_2318992_+\|rod-shape-determining-protein	gnl\|CDD\|336482	pfam06723, MreB_Mbl, MreB/Mbl protein. This family consists of bacterial MreB and Mbl proteins as well as two related archaeal sequences. MreB is known to be a rod shape-determining protein in bacteria and goes to make up the bacterial cytoskeleton. Genes coding for MreB/Mbl are only found in elongated bacteria, not in coccoid forms. It has been speculated that constituents of the eukaryotic cytoskeleton (tubulin, actin) may have evolved from prokaryotic precursor proteins closely related to today's bacterial proteins FtsZ and MreB/Mbl.	4.03085e-148
NZ_CP036534.1\|WP_037765627.1\|2311890_2312931_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.2165e-22
NZ_CP036534.1\|WP_166624026.1\|2358232_2362306_-\|hypothetical-protein	gnl\|CDD\|372768	pfam13868, TPH, Trichohyalin-plectin-homology domain. This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.	2.2365e-28
NZ_CP036534.1\|WP_166624022.1\|2310073_2311852_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	5.42761e-11
NZ_CP036534.1\|WP_166624021.1\|2309606_2310077_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.3451e-06
NZ_CP036534.1\|WP_037765629.1\|2319035_2320541_+\|GAF-domain-containing-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.37745e-15
NZ_CP036534.1\|WP_031033835.1\|2362980_2363289_-\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	4.89821e-07
NZ_CP036534.1\|WP_037765624.1\|2307839_2309210_+\|acetyl-CoA-carboxylase	gnl\|CDD\|223848	COG0777, AccD, Acetyl-CoA carboxylase beta subunit [Lipid metabolism].	3.33642e-47
NZ_CP036534.1\|WP_166624019.1\|2306389_2307847_+\|acyl-CoA-synthetase	gnl\|CDD\|236096	PRK07787, PRK07787, acyl-CoA synthetase; Validated.	0
NZ_CP036534.1\|WP_166624018.1\|2304898_2306302_+\|hypothetical-protein	gnl\|CDD\|115789	pfam07158, MatC_N, Dicarboxylate carrier protein MatC N-terminus. This family represents the N-terminal region of the bacterial dicarboxylate carrier protein MatC. The MatC protein is an integral membrane protein that could function as a malonate carrier.	7.23836e-60
NZ_CP036534.1\|WP_166625941.1\|2323515_2327913_-\|lonely-Cys-domain-containing-protein	gnl\|CDD\|380151	NF012197, lonely_Cys, lonely Cys domain-containing protein. This model describes an unusual domain, over 700 amino acids long, that is largely restricted to the Streptomyces (prodigious producers of natural products) and that may occur ten or more times in giant proteins. The most striking feature is an extremely low cysteine composition, one residue per domain, and that in an essentially invariant position.	0
NZ_CP036534.1\|WP_031033826.1\|2357610_2358066_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|376829	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family. This is a family of DNA-binding proteins. Members of this family form homodimers which bind DNA via a tweezer-like structure. The conformation of the DNA is changed when bound to these proteins. In bacteria, these proteins may play a role in DNA replication-recovery following DNA damage.	1.11967e-05
NZ_CP036534.1\|WP_166624025.1\|2322217_2322694_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	4.48049e-07
NZ_CP036534.1\|WP_051159631.1\|2320917_2321991_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236612	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional.	2.44865e-34
NZ_CP036534.1\|WP_031033838.1\|2363376_2363712_-\|hypothetical-protein	gnl\|CDD\|223285	COG0207, ThyA, Thymidylate synthase [Nucleotide transport and metabolism].	0.00204605
NZ_CP036534.1\|WP_166624023.1\|2312930_2317787_+\|protein-kinase	gnl\|CDD\|367616	pfam03704, BTAD, Bacterial transcriptional activator domain. Found in the DNRI/REDD/AFSR family of regulators. This region of AFSR, along with the C terminal region, is capable of independently directing actinorhodin production. This family contains TPR repeats.	1.03197e-27

>NZ_CP036534.1|WP_037765629.1|2319035_2320541_+|GAF-domain-containing-protein
MTAQPAPRLTRLLEAVLAGTGTELDLPGTLRHIAEGAAELTGADRADLVVADPGRDSPTEIRAPAPGPGAPAGPQEGAPGLRVPILVGDEEFGELRLTGRPGAGPFTAEDEQLLRVLATQAGISIGNARLYETARQRERWIEGAAAVTTALLTEESADDALTTVAERARLLADASAGVILHPTAEGGMAIVTASTPDDPDGMLGATIEPGSPVLEQLLGGEPVFLTDSATDPRMTTHVRHRFGPSMMLPLQANGRLIGTLALPRRRGARRYTDLERLLATQFASQAALALVLADARRGRERLAVYEDRDRIARDLHDLVVQRLFATGMMLESTERRRGAEDVRDILVRAVDELRSTVQEVRTTIFALQQPPAEPPTGLRGRVLRETAAAAARLGFAPSTRFSGAVDTRVPAPVADRLVTALRHALADACARGEVSRVEVAVDTAAPLADGRAGVRLTVFDDGAGGGAEDGAETDGRDGDEPDGDGGGYRGAGTTVTWWSPL
>NZ_CP036534.1|WP_031033810.1|2317933_2318992_+|rod-shape-determining-protein
MTASTASTASLEALRRCHFAVDLGAARTRVYVKGVGLVVDQPSAAAVNTRTGALIAVGEFAERMTGRTPGYIRVVRPVSGGTVVDIEMAQRMLRHLLGDRVRRALRRKPRLRAAVCTPHDADPLSQRAAIETLVGLGARRVELVDTLIAAAVGCGLPVEQPEATMIMVCGKHATQVAVLSLGSIVTAVRIPVGGEAVDHAIVQLLRHQHELVLPSQSVRPLQLALAGNGLTPQGPSSTEIHGRDVATGLARSVRVDTATVRNAIQTPLTAVLDGIGKVLRDCPPDLVADLADRGIMMVGGSALLPGFDQMLRQSTGMPVHIAERPDVCAVQGLGSMLEGRVEPLVLHPTAAD
>NZ_CP036534.1|WP_166624023.1|2312930_2317787_+|protein-kinase
MPADRPGPPDPLPHLADILGRASSGARPTPLELAELLWLAGQMTPAPDPPDGPAADGTVPEAAAGTFPPPDPVRRPAPDRDLDRDRHHRHGPGREQGQGRDSGQDRPVPGPPPAADAPGTPLRLPSSTMPAPGTSAAEPHSALLAPAPPMLRHTLALQRSLRPLKRRTAAPVGHEVDESATADRIARLGGGPEWWLPVLRPVRERWLRLHLVHDAGPTMPVWQPLVRELHDALAQSGVFRTVVLHRADADGTVGGDGFQAPADGRTVTLLISDCMGPQWREGEAGTRWFGTLRRWARHTPLAVLQPLPERLWRDTALPPVPGRLSAPHRAAPSSSLAFTPYDDTAPPAPRGAVSVPVLEPGPRWLANWAALVASPGGTTHPGAAATLHRPLPADADDRTDLARLSPEDLVLRFRARASREAFRLAGHLALGRPDLPVMRLVQAAVEPDPRPQHLAEVILSGLLTAVAGPPGSYAFRPGVRDLLLRGLPRTARNRTHELLLRTGGLIDERAGRSPGEFRALIPSRGGTERADGGETFAVISEDSARQLGVPAPPGAPSPFPRALGDRYRPVRRLAPTGRVWLAEDTGAGRTVAVRLHDRLPGAAGAAARRAFLRDARRLTEFTHPNVVAVLDAGVEDDVPYVVMEHLDGIAVNALARAGEGRLPAPLTVSLAAQLARALTALHRAGLTHGGVEASRLVLLPDGTVRLSLLEPGLSSGRAGRSADLRALCAVLLELCAGTSRLTVPIDSRRLDRLPADLRIDYAHAFDQLMSMDPSAQARGLDLLTDPRLLATAEETYTPRRYRALGPLRVTLPDGSPALPPDERALLTMLLLKHGRTVTHEELRYGLWAPGDEPRDPRRELIRLAARLAEVLGPGVLATPSHGYALHTSADHVDLVHCDELVRRADAARLAGALTEARDLVTEALSLWHGSEPLTGVPGWGAHTARARLLRLRLALHTRRAELDLSLGDYDRASADLAGLLRAHPHREDFRRLYLIALRRQGRGAEALEVYEEYELSGGRSPALTALGRELREEHAGPVDDAPWSEYEDPPDAPDTSPDAGADARHGALSAPDELPEGPFPTEDDFWAWPPEEREEPERHAAEATDGELVGAWGNPRAEDSGPHLPEEEYADADEGPTAERGPGAGPEDEAADADAGLDTDYRNCARYSLADGRHGDRDRAAALHVLVSHLLAESGLDGAAYELLDDRDGLLVLLAPRVEAVPLLRATVAGLPGQLAHLGGARLRAEFWQVEFQLDGAQEVQSLRADAESVAAVLDASAAQAVVALSDSLYYDEVYDQEGPDGLLLPPGLFRPLADDTGWYRLIDEGTGGESDGGTGGEPEPTTAPEPAREPAPAPDGGPVRGASPLPPGGRPPLPAGSRPRAVAPRSPADLVSGARCVLLGFDDVLARLYRPAAEREVLLDVLRLFADERDPEDALAGLPLPRAATDGYAGTLDFVRALAGHRLDPDVRLRLDRHEARAARTARPVPLADRLVQALDTRGVPVAVVTDRAPAPVTSYLRRRGLLECLRGDVHGRDTDLTRLMPDPDVLHRALERLDADAGDCVLVGSSVAEQTAARAAGLPFVGRYGDEPARRRLTGADGDALLVPDLRPLLTAAENR
>NZ_CP036534.1|WP_037765627.1|2311890_2312931_+|MoxR-family-ATPase
MPLWPVYTGAPAPHDGITRLPPPPPWRAFEGEPVLDPPAEDTDDPGASPDRAQQATAHRATTYQATEDTVQLVNAALYLRRPLLVTGPPGTGKSSLAYAVARELGLGPVLRWNITSRSTLHDGLYTYDPLSRLYAARHATGLPGAPAAATGIEDHLRLGPLGTALLPYARPRALLIDEIDKSDLDLPNDLLHVLEEGQYEIPELVRAARDVPGGRAEVLIDGTDRRVPVERGRVRCREFPFVVLTSNGEREFPPAFLRRCVSLRLRQPEGHHLAEIVRAHLGEPDAYAQQLIQRFLSRVGSGELATDQLLNAIYLARSSGLGADSLDGLAEQLMPYLGRSPQADAF
>NZ_CP036534.1|WP_166624022.1|2310073_2311852_+|trypsin-like-peptidase-domain-containing-protein
MSGDAWHARVACGPEVGAGFLVSGRRLLTCAHVVKWADRAPVTVSFPGRRELGALSAAVAVHGGWQGGAADPGDLAVLELEREVPLTPASFARPGAERGAPAPDLIAYGFPKGYDEGMLASYRAQPGPLISDEWVQLEAVTAHGQPLAAGFSGAALALADGTVVGMVSAVAGARDVRVGRMLPVEVMARYWPELGELVPTPGHRADVRRRLYALVREAEETGLSCDPKRLYASATDGFDPPPPDGGFAGLREAAAYVQWEVPEPGVVSRFADRLEELLHAPPPRPAAWSPIVVEIDRSGAGADQVTVEVSAYRDGQRHPVDARRLARGAVRAFVQERIDEAFTRLDPGADELLTFVLPREWLNEPVAHWECGEDDSTPLGCAYPLVVTDRHRHRSGRLRHQLRKKWRRLGASGGGTLQRVDCGTGERPAGLRKRLREDAELAGFATAPTVAREHFEVGLTVPVPVLMWPRRGCPGDPHEGPCPGSAFLDELAVSVADVPPSELPRHVMELRETADAADEPDAHWARDLQLLWDDPRCFADPTAALHSPVSPAPPVSPFPPTSPAPSASPTSPVPPGSPISPGSPISPVSPVR
>NZ_CP036534.1|WP_166624021.1|2309606_2310077_+|hypothetical-protein
MDGLVEFRTGDGVRVVVEGVEDEDGARLVSRGDGPARAARTFEDSLDGVRAAAASALRVFRDGSLRPDAVELEFGVKLSAEAGAVIAKGSAEGHLVVKLSWSPEPAPVPVTAPATATAPPAPPSPAPPSPPTSSSPDPSPSPAVAPAGDPDAATRS
>NZ_CP036534.1|WP_166624020.1|2309272_2309419_+|hypothetical-protein
MSPAVPADHPGPPGTSRGSHQHSTRSITIMNLLTDILAGLVHFVGWLV
>NZ_CP036534.1|WP_037765624.1|2307839_2309210_+|acetyl-CoA-carboxylase
MGERRSAREFLALVTDDFTELPAPRGEQDPDGPLGWPGYGAARARAADRTGEEESVVCGTGHVEGVRAVLLAFEFGFLGGSLGRRTGDRLEAAYAYARAHRLPVVPLVATGGSRMQEGMLALTQLQRVARQSVLTRRAGLPQVAVVRDPATGGGWATLGSGADVVLALPGAQVGFAGSRVRPPDADPAAYTAEAQVAAGSADAVVPEVELRSTLGRWLRLLTAPSGDPAPVPAPLGARDLPADGWDAVRRARAAGRPRAGAYLDAYFGERVALSGDRCGGADPEGMLCGFGTHAGRTVAYAAQTGTATRPAGYRTATRLIHLADRLGIPVLTLVDTPGAAGDAAAEGQAVGPAIADLFGAVASVRTPVSTLVIGEGGSGGALALAAPGATWATPDSYFSVIAPELAAAILKRPPAQVRLTADQLRLRPQDLAELDVIRTDEQVFPGTGDRRSEGRM
>NZ_CP036534.1|WP_166624019.1|2306389_2307847_+|acyl-CoA-synthetase
MSSLFPALSPAPSGARAGRPALRFGERSLTYAELAAAAGASAGRIGSAGRVAVWATPAMETAVAVVAALLAGVSAVPLNPKSGDKELAHILSDSGPSLVLAPPGAELPPALGTLERVDVDVDARGPVPEERADDGDPALVVYTSGTTGPPKGAVIPRRALSSTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLGRFSTEGAARELNGGATMLFGVPTMYHRIAETLPGDPELTKALAGARLLVSGSAALPVHDHERIAAATGRRVVERYGMTETLMNTSVRADGEPRAGAVGVPLPGVELRLVEEDGTPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGEIENALLEHPAVREAAVTGEPDPDLGERIVAWIVPADPAAPPALETLADHVAGRLAPHKRPRVVRYVEALPRNDMGKIMKRALTHG
>NZ_CP036534.1|WP_166624018.1|2304898_2306302_+|hypothetical-protein
MSPELISILVLVVVFVIATTRSVNMGALAFAAAFGVGTLVADLDADGIFAGFPGDLFVVLVGVTYLFAIARANGTTDWLVHASVRLVRGRVALIPWVMFALTGALTAIGAVSPAAVAIVAPIALSFATRYGISPLLMGTMVVHGAQAGGFSPISIYGSIVNGIVEREKLPGSEVGLFFASLVANLLIAAVLFAVLGGRKLWAQGAVPDGGDADGTGDGGGSSGSGDAKSTGETTGTGTGGVTGTASSPGPTAVAVRPEPGVGGGLGGTVLNPARIATLVALVALVVAVLGFDLDAGLTAVTLAVVLSAAWPDDSRRAAGEIAWSTVLLICGVLTYVGVLEEMGTITWAGEGVGGIGVPLLAAVLLCYIGAIVSAFASSVGIMGALIPLAVPFLAQGEIGAVGMVAALAVSATVVDVSPFSTNGALVLAAAPDVDRDRFFRQLMVYGGIVVAVVPALVWLVLVVPGFG
>NZ_CP036534.1|WP_051159631.1|2320917_2321991_-|helix-turn-helix-domain-containing-protein
MEGTDQRGNASGRGRTAAGAGRGAVLDASVVAPREREDTIRHALWASFSRVDIDHHTSQEDIGARMGLGAVGPMKVCSAQGTPVSLRRTERLAREDHEPSVFLGLQVSGTNMVGQHGRQCLVGPGNLVVFESTAPYTLRFEERFGYLSLRIPREALALPERVLREAAAVTLGPGNPTARLAFTYFSQLAASEELRGGAHAEALVGPSVELLRAVVTSQLGDAGAGRALPEVPLGMRVTQYVRAHLADPDLSAQRIAAAHGVSVRHLYNVLSRSGISLGDWIRTRRLAECRRELAGPGARTRTIAAIGRRWGFVDATHFSKAFKQAYGMSPRAWRELHQPGPARPRRPARRRVDVPAG
>NZ_CP036534.1|WP_166624025.1|2322217_2322694_+|peptidoglycan-binding-protein
MRTALTRTFVGAATVFAIAAGSLAGATVSSAASEPAARPAAGTQEVSVLAVTNLGLTVGRAKSWQCFLTRSGYEPWEHAGLLGTDSWKAAQRMFNARGFSGKSKLVVDGVVGPLTIKALQRFLNDFGFGLAVDGIAGKRTSAAFYEFNGVPMPNDPRC
>NZ_CP036534.1|WP_031033819.1|2322850_2323456_-|SseB-family-protein
MSESGAETPAAANPLDPAPPQEYVEAARLAPDHWLYLPDPAWRGEGPPPDWAVVGQWRSDSDGTIVEWEDNPEYRPSPEAMGWPEPADAVDRAIQLATTGYGPAEDVTAALAGAEVAVLVTADGEPVRASAPDGTPAVPVYTSARYLHAAGRLASAHLPVSTLLTRVPPDHALYLNSNAPVGMVLPTQGLADLLEEEPRPQ
>NZ_CP036534.1|WP_166625941.1|2323515_2327913_-|lonely-Cys-domain-containing-protein
MEGVEMTSAPALSPAPAPPSAPAPTTPAPPVFTGPAAPSPAALPPRSLVAYAREATVPSPAGRETIERLAHQVAAAGLHNRREGWAPPRVEVTGYGADGQGNRGLKRATAARNHFLRQLAQALDQLQRNLPADAPRLTAQDFRVKALAMTRVPDGWTGTGGLAGVSRADLGRQAAIRVVQAPDASATQTLDALRRRDRVLRHSPLDVDALAARVLHLDPGTVVDQGTRDALFALVNRAAAAGRATSLPALAAHHLAELGVTDPGRARHFTAGGRRVPGLNWDPDTDSAAELDTSRGDVLEDTGPGPYTVAETRPAPWPPGTTPYVVAAGGRHDKVEVLLPDGTTRDLDADEFAELVAADVARERLPKDTPLVLAVPFAGDQYLDLPRTLADRTGLTVWAHSGEVTLSSDHGVSTVDTVRRPGSPEGDWTASEPGLAPDPDDDVPDWYQQVATRPIVSALTGKQIGRASHHAGEWATAFEDDDRHLDRMTTYVHYYPATGQVSAERELPRPGAENAAYRLDMHGSPGHLHLAMRDGTVRPVDEREAGPWLRRRKSLSSLPKDHWIDFVVCWSGAPRDRAVPVSPNTASDAYAGPFVPDPLSSLSMGQQLANSTGRSVRLSYSSQGTRSHGGRYTRTLFADAQGRHRAWALFRPDPSGADLDRLAALAGLAPGDGEVSDEMRAGTLRLVRALRLTFGHDVDDAADFGDLLRGVAAVDHMWRSDTDFDAAGPFTLDLLNRVVAAHPEAASGVDRAAVRRVLAAAADHWAAWPGDELVGFAEVPAIEEAAQWMRDGDLEDEAVTALDLSGPHQVGEAVRSRMFWARVKAEETLRAPGTDLNVRVPKVLHLRPGTRPAGHRDTLLDLLTRAFATGRDAADPDVAAAYDLDESGVYAATGVETVHGGESGDGRDYTAEQAPTTVDLAEFGTPSGTADAPWAGRKGPAPYLVRVTPDGNAPDLLELSFDGETHRVAAGEFLELLAHDTSLAGKELNVPVVLAFSAHDGDPGDLAERIAQRLGRTVWWTGFPADLSATGTSGEPVLTLRPTPDGDVPDAAAWEKARPAQATSPGDAPRPVQAPLARAGAAPLLESFPALTLNDDTDPDTDAEAADSGPDADDADADAEPRGGTEGRAGDLPAPDWVLSRIRYAQEALLFEQRLAAHLGENEQVNAELGKVVRAFWSITLHNRLDYRLFGSRNEMSAGAVGQRYEALARVVDSGNLRERVTFLFNGVAKDLVPHLMGGVEPQHPVIGVERRDRHRSQLFQEYERRVAELRAAELDPEDEAQEMEDLEAMLRTPLRPDEVSPPLSEAEWRRAVRDGELLWSPASMEHTLPMAADFQARSEESGGLVLTGTSGSAYRILTHVARLTRLAGVPVDLGLVRAGLASILVGVGHHSFHEVMTGAQLALDEFDPGATSVYSDNWGRYWDVYPLTEEELRASVAREGLFPDEHARALLTRLEAERTAGTRQ
>NZ_CP036534.1|WP_031033824.1|2357219_2357609_-|hypothetical-protein
MGQRYYVDPARIEALSGQLEEIATLARSMTEEFLDGLAPTVSWPGTSGDFAEKAKPQEQKERQTTKDTMMSIRDALVSITDATLSQVKLMEDTRDRNLEDIERNTSRIETDGFGLDGSGGGDTGGHGRH
>NZ_CP036534.1|WP_031033826.1|2357610_2358066_-|YbaB/EbfC-family-nucleoid-associated-protein
MTEPLEQRLEKAMAELRSAQEAVERTERELRQASFAVLSSDRAVRATVGPQGELTGLDFLEYKYRDMSPQELAASVLEAASAAREKMNRHVMKAMAPFAEPSSEVPELKGFELDWERIFGPGVLEKADQDTDRTDGAAPGWRDALGEDGED
>NZ_CP036534.1|WP_166624026.1|2358232_2362306_-|hypothetical-protein
MVDRYDADSIDNVNKYEGATDASSDVWAGLVTHITGYPVPDRSTVFDTLRSDHGGKLFRMDIRDRGLGSFVQDASGFLRNTGEDYDIWFFDSGKKTQIKQARIVFEGRVKAGDEVIWADPGTDDVANASVREGNEFKDYNKDEMSTVALARYMNGPRTALLELLGGNTADARFSNLGVAEDSSVDLNSFNTTGQTFDFAAQFFRDQGPKIKEWEEALGREDASWKGEAAEVFRSLLTKIRENYDAYIETFDEKPSTGEGDGTGKTVYSRALSQARSALEDAADKLLDAWITWANSDYYDPHRVLRYVLDDLAQWVDSNNVAKTDIKTTYSAYSSSTYHDPQEGFSQNHPEYGDLTDIANWAKVGDKAVQIWSRGVDEHLVKPARTVQSNLNNTFLDLGGDFSENIPEPKSTSTASQEYEERKAEEAQEEIERQNEENRRYQDELREEQEKQREEDRKYQEELREEQRQQREEDKQAQDELREEQNRQREEDKQAQDELREEQNRQREEDRKYQDELRAEQEKQADEAQEQLRTLNDPTTTDLGGLDDLLNRDVPVTESLGDMGGLNGGPGGGDTALTESLGDLGGVNGGPGGGPGTDDLGNFGDANNAANQSLAGLGGTGGGDQPAAVPPPTNLGSLGGLNSGGGTRLPTERTPGLVDGNPVAQFPDGSSTSFDPDTGLLTSTAPDGSTTTTDLGNGLQVTNPDGSVTSLGDDGNLKTTFPDGRTETIDPSTGQAVTTNPDGTTTTTDLGSLGGLNNGAGGGSLGMPTGGSTQLSGGDLTSRFPDGSSTSFDPDTGTLTTTGPDGSTTTTDLGNGLEVTNPDGSVTSLGDDGNLKTTFPDGTTQSIDPSTGQAVTTNPDGTTTTTDLGSLGGLNNGAGGGSLDMPTGGSTQLSGGDLTSRFPDGSSTSFDPDTGTLTTTGPDGSTTTTDLGNGLEVTNPDGSVTSLGDDGNLKTTFPDGTTQSIDPSTGQAVTTNPDGTTTTTDLGSLGGLNGQGNQGGLDSLGDLQTQSNGDLGGLGDLDLGSLDGLNSGGGSGLETPTGGDTSLAGDDLLTRFPDGTQATFDTQTGMLTATNPDGSVTTTDLTHGAQVTNPDGSVTSLDNGMLTTDFPDGSTQVVDPETGIATVTDAQGNTETVNLHDLNTGNGPTSSNGNGLLDELGSLDGLGGSGGTGGGGTSTETLSPSDLGLGNGGSLTSGTGGGLTAGASVGSDGLLTGAAAPLSDSATAAGGTPLAPAAGAGTAGAPGMPGTPGMPMGGMGGMGGGGDKGNGERVRAVLVDAAEESERRNRRRRSPWNRQEDSDTFLSPASRVATTGGDDSSGEEPGQGRGVTTSADYLEEDADVWGTEDGGTPAVIGR
>NZ_CP036534.1|WP_070388003.1|2362371_2362842_-|type-VII-secretion-system-associated-protein
MADNPTDIKHFDLSAMENFRDYEVDRAYKDAKRHREGGGDGDPRTLGDLIDGHTTEDNLDQSQQLLRIGKMASDGRVSGPKLLEGVREAATALDKLLGDQIDLYKELQDALTDTIEGAQKTQAKNLDAIDAQTLLQHFDEVDTLTAGGSGGEDSDS
>NZ_CP036534.1|WP_031033835.1|2362980_2363289_-|WXG100-family-type-VII-secretion-target
MADGIIDVQYPVVRRAVEEMTEQTQQIINALNNLEDELKPLVASWEGSDQEMYRQVQMEWDQATKNMATLLNDNGTLIQSIHDNHSRDERRSADNWGNVRAR
>NZ_CP036534.1|WP_031033838.1|2363376_2363712_-|hypothetical-protein
MADSAARKADYAKGLGGVSSLESARSQVEKIQNNVAEIAARSGVGGDEGQALLKLFRSWNTEAQTVVVQISKMIDALQENVTSANRLAQENQDLTEVLNSKTSQGVFQALL

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Crispr_ID: NZ_CP036534_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_6

2344003-2344107

Orphan

Consensus_repeat	Method
GGCGTCGTCGGTGAACCGGAACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036534_6

>merge|NZ_CP036534|6|2344003-2344107|CRISPRCasFinder
GGCGTCGTCGGTGAACCGGAACCGGGCGAGCCGCTCGGCGGCGGAGGGGTCGGACGGGTCGGAGGGGTCGGAGGGGTCGGAGGGGTCGTCGGTGAACCGGAACCG

>NZ_CP036534|6|6|2344003-2344107|CRISPRCasFinder
GGCGTCGTCGGTGAACCGGAACCG	GGCGAGCCGCTCGGCGGCGGAGGGGTCGGACGGGTCGGAGGGGTCGGAGGGGTCGGA
GGGGTCGTCGGTGAACCGGAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_031033810.1\|2317933_2318992_+\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|336482
NZ_CP036534.1\|WP_166625941.1\|2323515_2327913_-\|lonely-Cys-domain-containing-protein	unknown	unknown	gnl\|CDD\|380151
NZ_CP036534.1\|WP_166624026.1\|2358232_2362306_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372768
NZ_CP036534.1\|WP_166624022.1\|2310073_2311852_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP036534.1\|WP_166624024.1\|2320727_2320874_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031033826.1\|2357610_2358066_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|376829
NZ_CP036534.1\|WP_031033845.1\|2366149_2367556_-\|type-VII-secretion-integral-membrane-protein-EccD	unknown	unknown	gnl\|CDD\|274855
NZ_CP036534.1\|WP_166624028.1\|2368017_2372064_+\|type-VII-secretion-protein-EccCa	unknown	unknown	gnl\|CDD\|274858
NZ_CP036534.1\|WP_031033824.1\|2357219_2357609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_051159631.1\|2320917_2321991_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236612
NZ_CP036534.1\|WP_031033819.1\|2322850_2323456_-\|SseB-family-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_037765627.1\|2311890_2312931_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP036534.1\|WP_166624027.1\|2364172_2365810_-\|type-VII-secretion-protein-EccB	unknown	unknown	gnl\|CDD\|368288
NZ_CP036534.1\|WP_070388003.1\|2362371_2362842_-\|type-VII-secretion-system-associated-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031033835.1\|2362980_2363289_-\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|274862
NZ_CP036534.1\|WP_166624025.1\|2322217_2322694_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP036534.1\|WP_037765629.1\|2319035_2320541_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP036534.1\|WP_166625942.1\|2372372_2373674_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|274856
NZ_CP036534.1\|WP_031033838.1\|2363376_2363712_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223285
NZ_CP036534.1\|WP_166624023.1\|2312930_2317787_+\|protein-kinase	unknown	unknown	gnl\|CDD\|367616

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_031033810.1\|2317933_2318992_+\|rod-shape-determining-protein	gnl\|CDD\|336482	pfam06723, MreB_Mbl, MreB/Mbl protein. This family consists of bacterial MreB and Mbl proteins as well as two related archaeal sequences. MreB is known to be a rod shape-determining protein in bacteria and goes to make up the bacterial cytoskeleton. Genes coding for MreB/Mbl are only found in elongated bacteria, not in coccoid forms. It has been speculated that constituents of the eukaryotic cytoskeleton (tubulin, actin) may have evolved from prokaryotic precursor proteins closely related to today's bacterial proteins FtsZ and MreB/Mbl.	4.03085e-148
NZ_CP036534.1\|WP_166625941.1\|2323515_2327913_-\|lonely-Cys-domain-containing-protein	gnl\|CDD\|380151	NF012197, lonely_Cys, lonely Cys domain-containing protein. This model describes an unusual domain, over 700 amino acids long, that is largely restricted to the Streptomyces (prodigious producers of natural products) and that may occur ten or more times in giant proteins. The most striking feature is an extremely low cysteine composition, one residue per domain, and that in an essentially invariant position.	0
NZ_CP036534.1\|WP_166624026.1\|2358232_2362306_-\|hypothetical-protein	gnl\|CDD\|372768	pfam13868, TPH, Trichohyalin-plectin-homology domain. This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.	2.2365e-28
NZ_CP036534.1\|WP_166624022.1\|2310073_2311852_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	5.42761e-11
NZ_CP036534.1\|WP_166624027.1\|2364172_2365810_-\|type-VII-secretion-protein-EccB	gnl\|CDD\|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	5.83543e-88
NZ_CP036534.1\|WP_031033826.1\|2357610_2358066_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|376829	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family. This is a family of DNA-binding proteins. Members of this family form homodimers which bind DNA via a tweezer-like structure. The conformation of the DNA is changed when bound to these proteins. In bacteria, these proteins may play a role in DNA replication-recovery following DNA damage.	1.11967e-05
NZ_CP036534.1\|WP_031033845.1\|2366149_2367556_-\|type-VII-secretion-integral-membrane-protein-EccD	gnl\|CDD\|274855	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD. Members of this family are EccD, a component of actinobacterial type VII secretion systems (T7SS) with ten to eleven predicted transmembrane helix regions. [Protein fate, Protein and peptide secretion and trafficking].	4.39872e-37
NZ_CP036534.1\|WP_166624028.1\|2368017_2372064_+\|type-VII-secretion-protein-EccCa	gnl\|CDD\|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP036534.1\|WP_031033835.1\|2362980_2363289_-\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	4.89821e-07
NZ_CP036534.1\|WP_051159631.1\|2320917_2321991_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236612	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional.	2.44865e-34
NZ_CP036534.1\|WP_037765627.1\|2311890_2312931_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.2165e-22
NZ_CP036534.1\|WP_166624025.1\|2322217_2322694_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	4.48049e-07
NZ_CP036534.1\|WP_037765629.1\|2319035_2320541_+\|GAF-domain-containing-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.37745e-15
NZ_CP036534.1\|WP_166625942.1\|2372372_2373674_-\|S8-family-serine-peptidase	gnl\|CDD\|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	9.79105e-42
NZ_CP036534.1\|WP_031033838.1\|2363376_2363712_-\|hypothetical-protein	gnl\|CDD\|223285	COG0207, ThyA, Thymidylate synthase [Nucleotide transport and metabolism].	0.00204605
NZ_CP036534.1\|WP_166624023.1\|2312930_2317787_+\|protein-kinase	gnl\|CDD\|367616	pfam03704, BTAD, Bacterial transcriptional activator domain. Found in the DNRI/REDD/AFSR family of regulators. This region of AFSR, along with the C terminal region, is capable of independently directing actinorhodin production. This family contains TPR repeats.	1.03197e-27

>NZ_CP036534.1|WP_166625941.1|2323515_2327913_-|lonely-Cys-domain-containing-protein
MEGVEMTSAPALSPAPAPPSAPAPTTPAPPVFTGPAAPSPAALPPRSLVAYAREATVPSPAGRETIERLAHQVAAAGLHNRREGWAPPRVEVTGYGADGQGNRGLKRATAARNHFLRQLAQALDQLQRNLPADAPRLTAQDFRVKALAMTRVPDGWTGTGGLAGVSRADLGRQAAIRVVQAPDASATQTLDALRRRDRVLRHSPLDVDALAARVLHLDPGTVVDQGTRDALFALVNRAAAAGRATSLPALAAHHLAELGVTDPGRARHFTAGGRRVPGLNWDPDTDSAAELDTSRGDVLEDTGPGPYTVAETRPAPWPPGTTPYVVAAGGRHDKVEVLLPDGTTRDLDADEFAELVAADVARERLPKDTPLVLAVPFAGDQYLDLPRTLADRTGLTVWAHSGEVTLSSDHGVSTVDTVRRPGSPEGDWTASEPGLAPDPDDDVPDWYQQVATRPIVSALTGKQIGRASHHAGEWATAFEDDDRHLDRMTTYVHYYPATGQVSAERELPRPGAENAAYRLDMHGSPGHLHLAMRDGTVRPVDEREAGPWLRRRKSLSSLPKDHWIDFVVCWSGAPRDRAVPVSPNTASDAYAGPFVPDPLSSLSMGQQLANSTGRSVRLSYSSQGTRSHGGRYTRTLFADAQGRHRAWALFRPDPSGADLDRLAALAGLAPGDGEVSDEMRAGTLRLVRALRLTFGHDVDDAADFGDLLRGVAAVDHMWRSDTDFDAAGPFTLDLLNRVVAAHPEAASGVDRAAVRRVLAAAADHWAAWPGDELVGFAEVPAIEEAAQWMRDGDLEDEAVTALDLSGPHQVGEAVRSRMFWARVKAEETLRAPGTDLNVRVPKVLHLRPGTRPAGHRDTLLDLLTRAFATGRDAADPDVAAAYDLDESGVYAATGVETVHGGESGDGRDYTAEQAPTTVDLAEFGTPSGTADAPWAGRKGPAPYLVRVTPDGNAPDLLELSFDGETHRVAAGEFLELLAHDTSLAGKELNVPVVLAFSAHDGDPGDLAERIAQRLGRTVWWTGFPADLSATGTSGEPVLTLRPTPDGDVPDAAAWEKARPAQATSPGDAPRPVQAPLARAGAAPLLESFPALTLNDDTDPDTDAEAADSGPDADDADADAEPRGGTEGRAGDLPAPDWVLSRIRYAQEALLFEQRLAAHLGENEQVNAELGKVVRAFWSITLHNRLDYRLFGSRNEMSAGAVGQRYEALARVVDSGNLRERVTFLFNGVAKDLVPHLMGGVEPQHPVIGVERRDRHRSQLFQEYERRVAELRAAELDPEDEAQEMEDLEAMLRTPLRPDEVSPPLSEAEWRRAVRDGELLWSPASMEHTLPMAADFQARSEESGGLVLTGTSGSAYRILTHVARLTRLAGVPVDLGLVRAGLASILVGVGHHSFHEVMTGAQLALDEFDPGATSVYSDNWGRYWDVYPLTEEELRASVAREGLFPDEHARALLTRLEAERTAGTRQ
>NZ_CP036534.1|WP_031033819.1|2322850_2323456_-|SseB-family-protein
MSESGAETPAAANPLDPAPPQEYVEAARLAPDHWLYLPDPAWRGEGPPPDWAVVGQWRSDSDGTIVEWEDNPEYRPSPEAMGWPEPADAVDRAIQLATTGYGPAEDVTAALAGAEVAVLVTADGEPVRASAPDGTPAVPVYTSARYLHAAGRLASAHLPVSTLLTRVPPDHALYLNSNAPVGMVLPTQGLADLLEEEPRPQ
>NZ_CP036534.1|WP_166624025.1|2322217_2322694_+|peptidoglycan-binding-protein
MRTALTRTFVGAATVFAIAAGSLAGATVSSAASEPAARPAAGTQEVSVLAVTNLGLTVGRAKSWQCFLTRSGYEPWEHAGLLGTDSWKAAQRMFNARGFSGKSKLVVDGVVGPLTIKALQRFLNDFGFGLAVDGIAGKRTSAAFYEFNGVPMPNDPRC
>NZ_CP036534.1|WP_051159631.1|2320917_2321991_-|helix-turn-helix-domain-containing-protein
MEGTDQRGNASGRGRTAAGAGRGAVLDASVVAPREREDTIRHALWASFSRVDIDHHTSQEDIGARMGLGAVGPMKVCSAQGTPVSLRRTERLAREDHEPSVFLGLQVSGTNMVGQHGRQCLVGPGNLVVFESTAPYTLRFEERFGYLSLRIPREALALPERVLREAAAVTLGPGNPTARLAFTYFSQLAASEELRGGAHAEALVGPSVELLRAVVTSQLGDAGAGRALPEVPLGMRVTQYVRAHLADPDLSAQRIAAAHGVSVRHLYNVLSRSGISLGDWIRTRRLAECRRELAGPGARTRTIAAIGRRWGFVDATHFSKAFKQAYGMSPRAWRELHQPGPARPRRPARRRVDVPAG
>NZ_CP036534.1|WP_166624024.1|2320727_2320874_+|hypothetical-protein
MSEPTPSQAEGERDEDRNGTADVPHSTPSQAEGEREEDETVPGGPEDR
>NZ_CP036534.1|WP_037765629.1|2319035_2320541_+|GAF-domain-containing-protein
MTAQPAPRLTRLLEAVLAGTGTELDLPGTLRHIAEGAAELTGADRADLVVADPGRDSPTEIRAPAPGPGAPAGPQEGAPGLRVPILVGDEEFGELRLTGRPGAGPFTAEDEQLLRVLATQAGISIGNARLYETARQRERWIEGAAAVTTALLTEESADDALTTVAERARLLADASAGVILHPTAEGGMAIVTASTPDDPDGMLGATIEPGSPVLEQLLGGEPVFLTDSATDPRMTTHVRHRFGPSMMLPLQANGRLIGTLALPRRRGARRYTDLERLLATQFASQAALALVLADARRGRERLAVYEDRDRIARDLHDLVVQRLFATGMMLESTERRRGAEDVRDILVRAVDELRSTVQEVRTTIFALQQPPAEPPTGLRGRVLRETAAAAARLGFAPSTRFSGAVDTRVPAPVADRLVTALRHALADACARGEVSRVEVAVDTAAPLADGRAGVRLTVFDDGAGGGAEDGAETDGRDGDEPDGDGGGYRGAGTTVTWWSPL
>NZ_CP036534.1|WP_031033810.1|2317933_2318992_+|rod-shape-determining-protein
MTASTASTASLEALRRCHFAVDLGAARTRVYVKGVGLVVDQPSAAAVNTRTGALIAVGEFAERMTGRTPGYIRVVRPVSGGTVVDIEMAQRMLRHLLGDRVRRALRRKPRLRAAVCTPHDADPLSQRAAIETLVGLGARRVELVDTLIAAAVGCGLPVEQPEATMIMVCGKHATQVAVLSLGSIVTAVRIPVGGEAVDHAIVQLLRHQHELVLPSQSVRPLQLALAGNGLTPQGPSSTEIHGRDVATGLARSVRVDTATVRNAIQTPLTAVLDGIGKVLRDCPPDLVADLADRGIMMVGGSALLPGFDQMLRQSTGMPVHIAERPDVCAVQGLGSMLEGRVEPLVLHPTAAD
>NZ_CP036534.1|WP_166624023.1|2312930_2317787_+|protein-kinase
MPADRPGPPDPLPHLADILGRASSGARPTPLELAELLWLAGQMTPAPDPPDGPAADGTVPEAAAGTFPPPDPVRRPAPDRDLDRDRHHRHGPGREQGQGRDSGQDRPVPGPPPAADAPGTPLRLPSSTMPAPGTSAAEPHSALLAPAPPMLRHTLALQRSLRPLKRRTAAPVGHEVDESATADRIARLGGGPEWWLPVLRPVRERWLRLHLVHDAGPTMPVWQPLVRELHDALAQSGVFRTVVLHRADADGTVGGDGFQAPADGRTVTLLISDCMGPQWREGEAGTRWFGTLRRWARHTPLAVLQPLPERLWRDTALPPVPGRLSAPHRAAPSSSLAFTPYDDTAPPAPRGAVSVPVLEPGPRWLANWAALVASPGGTTHPGAAATLHRPLPADADDRTDLARLSPEDLVLRFRARASREAFRLAGHLALGRPDLPVMRLVQAAVEPDPRPQHLAEVILSGLLTAVAGPPGSYAFRPGVRDLLLRGLPRTARNRTHELLLRTGGLIDERAGRSPGEFRALIPSRGGTERADGGETFAVISEDSARQLGVPAPPGAPSPFPRALGDRYRPVRRLAPTGRVWLAEDTGAGRTVAVRLHDRLPGAAGAAARRAFLRDARRLTEFTHPNVVAVLDAGVEDDVPYVVMEHLDGIAVNALARAGEGRLPAPLTVSLAAQLARALTALHRAGLTHGGVEASRLVLLPDGTVRLSLLEPGLSSGRAGRSADLRALCAVLLELCAGTSRLTVPIDSRRLDRLPADLRIDYAHAFDQLMSMDPSAQARGLDLLTDPRLLATAEETYTPRRYRALGPLRVTLPDGSPALPPDERALLTMLLLKHGRTVTHEELRYGLWAPGDEPRDPRRELIRLAARLAEVLGPGVLATPSHGYALHTSADHVDLVHCDELVRRADAARLAGALTEARDLVTEALSLWHGSEPLTGVPGWGAHTARARLLRLRLALHTRRAELDLSLGDYDRASADLAGLLRAHPHREDFRRLYLIALRRQGRGAEALEVYEEYELSGGRSPALTALGRELREEHAGPVDDAPWSEYEDPPDAPDTSPDAGADARHGALSAPDELPEGPFPTEDDFWAWPPEEREEPERHAAEATDGELVGAWGNPRAEDSGPHLPEEEYADADEGPTAERGPGAGPEDEAADADAGLDTDYRNCARYSLADGRHGDRDRAAALHVLVSHLLAESGLDGAAYELLDDRDGLLVLLAPRVEAVPLLRATVAGLPGQLAHLGGARLRAEFWQVEFQLDGAQEVQSLRADAESVAAVLDASAAQAVVALSDSLYYDEVYDQEGPDGLLLPPGLFRPLADDTGWYRLIDEGTGGESDGGTGGEPEPTTAPEPAREPAPAPDGGPVRGASPLPPGGRPPLPAGSRPRAVAPRSPADLVSGARCVLLGFDDVLARLYRPAAEREVLLDVLRLFADERDPEDALAGLPLPRAATDGYAGTLDFVRALAGHRLDPDVRLRLDRHEARAARTARPVPLADRLVQALDTRGVPVAVVTDRAPAPVTSYLRRRGLLECLRGDVHGRDTDLTRLMPDPDVLHRALERLDADAGDCVLVGSSVAEQTAARAAGLPFVGRYGDEPARRRLTGADGDALLVPDLRPLLTAAENR
>NZ_CP036534.1|WP_037765627.1|2311890_2312931_+|MoxR-family-ATPase
MPLWPVYTGAPAPHDGITRLPPPPPWRAFEGEPVLDPPAEDTDDPGASPDRAQQATAHRATTYQATEDTVQLVNAALYLRRPLLVTGPPGTGKSSLAYAVARELGLGPVLRWNITSRSTLHDGLYTYDPLSRLYAARHATGLPGAPAAATGIEDHLRLGPLGTALLPYARPRALLIDEIDKSDLDLPNDLLHVLEEGQYEIPELVRAARDVPGGRAEVLIDGTDRRVPVERGRVRCREFPFVVLTSNGEREFPPAFLRRCVSLRLRQPEGHHLAEIVRAHLGEPDAYAQQLIQRFLSRVGSGELATDQLLNAIYLARSSGLGADSLDGLAEQLMPYLGRSPQADAF
>NZ_CP036534.1|WP_166624022.1|2310073_2311852_+|trypsin-like-peptidase-domain-containing-protein
MSGDAWHARVACGPEVGAGFLVSGRRLLTCAHVVKWADRAPVTVSFPGRRELGALSAAVAVHGGWQGGAADPGDLAVLELEREVPLTPASFARPGAERGAPAPDLIAYGFPKGYDEGMLASYRAQPGPLISDEWVQLEAVTAHGQPLAAGFSGAALALADGTVVGMVSAVAGARDVRVGRMLPVEVMARYWPELGELVPTPGHRADVRRRLYALVREAEETGLSCDPKRLYASATDGFDPPPPDGGFAGLREAAAYVQWEVPEPGVVSRFADRLEELLHAPPPRPAAWSPIVVEIDRSGAGADQVTVEVSAYRDGQRHPVDARRLARGAVRAFVQERIDEAFTRLDPGADELLTFVLPREWLNEPVAHWECGEDDSTPLGCAYPLVVTDRHRHRSGRLRHQLRKKWRRLGASGGGTLQRVDCGTGERPAGLRKRLREDAELAGFATAPTVAREHFEVGLTVPVPVLMWPRRGCPGDPHEGPCPGSAFLDELAVSVADVPPSELPRHVMELRETADAADEPDAHWARDLQLLWDDPRCFADPTAALHSPVSPAPPVSPFPPTSPAPSASPTSPVPPGSPISPGSPISPVSPVR
>NZ_CP036534.1|WP_031033824.1|2357219_2357609_-|hypothetical-protein
MGQRYYVDPARIEALSGQLEEIATLARSMTEEFLDGLAPTVSWPGTSGDFAEKAKPQEQKERQTTKDTMMSIRDALVSITDATLSQVKLMEDTRDRNLEDIERNTSRIETDGFGLDGSGGGDTGGHGRH
>NZ_CP036534.1|WP_031033826.1|2357610_2358066_-|YbaB/EbfC-family-nucleoid-associated-protein
MTEPLEQRLEKAMAELRSAQEAVERTERELRQASFAVLSSDRAVRATVGPQGELTGLDFLEYKYRDMSPQELAASVLEAASAAREKMNRHVMKAMAPFAEPSSEVPELKGFELDWERIFGPGVLEKADQDTDRTDGAAPGWRDALGEDGED
>NZ_CP036534.1|WP_166624026.1|2358232_2362306_-|hypothetical-protein
MVDRYDADSIDNVNKYEGATDASSDVWAGLVTHITGYPVPDRSTVFDTLRSDHGGKLFRMDIRDRGLGSFVQDASGFLRNTGEDYDIWFFDSGKKTQIKQARIVFEGRVKAGDEVIWADPGTDDVANASVREGNEFKDYNKDEMSTVALARYMNGPRTALLELLGGNTADARFSNLGVAEDSSVDLNSFNTTGQTFDFAAQFFRDQGPKIKEWEEALGREDASWKGEAAEVFRSLLTKIRENYDAYIETFDEKPSTGEGDGTGKTVYSRALSQARSALEDAADKLLDAWITWANSDYYDPHRVLRYVLDDLAQWVDSNNVAKTDIKTTYSAYSSSTYHDPQEGFSQNHPEYGDLTDIANWAKVGDKAVQIWSRGVDEHLVKPARTVQSNLNNTFLDLGGDFSENIPEPKSTSTASQEYEERKAEEAQEEIERQNEENRRYQDELREEQEKQREEDRKYQEELREEQRQQREEDKQAQDELREEQNRQREEDKQAQDELREEQNRQREEDRKYQDELRAEQEKQADEAQEQLRTLNDPTTTDLGGLDDLLNRDVPVTESLGDMGGLNGGPGGGDTALTESLGDLGGVNGGPGGGPGTDDLGNFGDANNAANQSLAGLGGTGGGDQPAAVPPPTNLGSLGGLNSGGGTRLPTERTPGLVDGNPVAQFPDGSSTSFDPDTGLLTSTAPDGSTTTTDLGNGLQVTNPDGSVTSLGDDGNLKTTFPDGRTETIDPSTGQAVTTNPDGTTTTTDLGSLGGLNNGAGGGSLGMPTGGSTQLSGGDLTSRFPDGSSTSFDPDTGTLTTTGPDGSTTTTDLGNGLEVTNPDGSVTSLGDDGNLKTTFPDGTTQSIDPSTGQAVTTNPDGTTTTTDLGSLGGLNNGAGGGSLDMPTGGSTQLSGGDLTSRFPDGSSTSFDPDTGTLTTTGPDGSTTTTDLGNGLEVTNPDGSVTSLGDDGNLKTTFPDGTTQSIDPSTGQAVTTNPDGTTTTTDLGSLGGLNGQGNQGGLDSLGDLQTQSNGDLGGLGDLDLGSLDGLNSGGGSGLETPTGGDTSLAGDDLLTRFPDGTQATFDTQTGMLTATNPDGSVTTTDLTHGAQVTNPDGSVTSLDNGMLTTDFPDGSTQVVDPETGIATVTDAQGNTETVNLHDLNTGNGPTSSNGNGLLDELGSLDGLGGSGGTGGGGTSTETLSPSDLGLGNGGSLTSGTGGGLTAGASVGSDGLLTGAAAPLSDSATAAGGTPLAPAAGAGTAGAPGMPGTPGMPMGGMGGMGGGGDKGNGERVRAVLVDAAEESERRNRRRRSPWNRQEDSDTFLSPASRVATTGGDDSSGEEPGQGRGVTTSADYLEEDADVWGTEDGGTPAVIGR
>NZ_CP036534.1|WP_070388003.1|2362371_2362842_-|type-VII-secretion-system-associated-protein
MADNPTDIKHFDLSAMENFRDYEVDRAYKDAKRHREGGGDGDPRTLGDLIDGHTTEDNLDQSQQLLRIGKMASDGRVSGPKLLEGVREAATALDKLLGDQIDLYKELQDALTDTIEGAQKTQAKNLDAIDAQTLLQHFDEVDTLTAGGSGGEDSDS
>NZ_CP036534.1|WP_031033835.1|2362980_2363289_-|WXG100-family-type-VII-secretion-target
MADGIIDVQYPVVRRAVEEMTEQTQQIINALNNLEDELKPLVASWEGSDQEMYRQVQMEWDQATKNMATLLNDNGTLIQSIHDNHSRDERRSADNWGNVRAR
>NZ_CP036534.1|WP_031033838.1|2363376_2363712_-|hypothetical-protein
MADSAARKADYAKGLGGVSSLESARSQVEKIQNNVAEIAARSGVGGDEGQALLKLFRSWNTEAQTVVVQISKMIDALQENVTSANRLAQENQDLTEVLNSKTSQGVFQALL
>NZ_CP036534.1|WP_166624027.1|2364172_2365810_-|type-VII-secretion-protein-EccB
MQSKRDQVQAHSFMMGRLSSGLLTAAPDAPESPLGRTTRGVVFGLLFTVLIGAGTVVYGLLRPGGNDGWRDGGHLVVNRDTGARYLWTDTDGVLHPVRNYTSARLIGGSDLPTEDVGTASLRDVPVGGPVGIPGAPDGLPDAGQLDGGAWNMCVTGPDGADPSTSGAAAAPAVDAAGATTLVVGAPVDSAAVGRDRGVLVSGPDKTQYLVWRGSRLPLDEKSDARTALGYGSVSAAPVSAAFLDALAPGPELRSPDVPGRGGEGPELGGEATRVGQVFEVSVPGGESTYHLLREEGLVPLTRLGAALVLGDPATQKDAYRGESPEARTVGADALREHQAEGAGGDEAAGLPDAPPAPQSVPRGSALCAQVDGGDGGARIGSVLAPLTELAPVAVPEGTADPVREACVPTDATVVRPGHGALVRALHASGAAHAGTTYLVAENGVKYRVPADDSLQALGYTTGDIDSVPAPLLAALPTGADLDPDAASGAAEVRVTAPDCGTDAQQEEAAPGKKAKAASFVTGDPAAAPGIADTAPRPRQDGQSGF
>NZ_CP036534.1|WP_031033845.1|2366149_2367556_-|type-VII-secretion-integral-membrane-protein-EccD
MTDSTVAELCRLTVRAPSVSVDLAVPADVPVTDLLPTLLRYVGEEVEEAGLDHAGWVLQRLGDAPLDEETTLARAGLADGEVLYLRPHTEVLPEARLDDLVDGISDTVGRRMYTWSPKAARGLLGGTAVATVVLALVLVFWPGVDGSGSLRVICAGVAGLLALAGAGSASRAVGDRLTATVLGLLVAPCLALAGWVLPGGDLTGPDTARVVGARLLAAGAAGAGGAVLALAATAVGAPALFATALVAVATAIAGALIGYTGLDAPAAVALVMAVLALGAGAVAPFAFKLAGMRMPALPSSASQLQEGIEPYAGDEVAERTELAGRWVTALFAATGTAAVAALVVLAERPDLPEVLTALVLSLLLLLHSRGLVAVGQRLTLALPGVLGLLLLARAWAVDSDGDMRLVVFAVLLAAASALVIATWTVPGRRMLPYWGRAAELAHTVFAVALLPLTLWVAGLFGWLRGLFG
>NZ_CP036534.1|WP_166624028.1|2368017_2372064_+|type-VII-secretion-protein-EccCa
MPEGQLTLQEPPVLSETVPDTSTIWTYLPMALMSMSMMLMFLRPGGGNGVFMYLALGVMALSAAAMLLGQLMRRSGERKQRLKGERRDYLRYLTQIRKRVRATVVEQQRALAWRHPDPASLRSLARTSRLWERRPADEDFGEVRLAVGEQQLALSLNPVSTRPVEDLEPLCAHALRRFIRAYSTIPEQPIGLYLRSSARILLRPEDAADEDGAAPEVPPQGQALGGTGGTAGAGTGVRATSPADEALAALVRAVLAQLAVFHAPEELWIAVCASDDRRSDWEWAKWLPHVLDPHEEDGAGSVRRITADLTELDDLLGSEFAERPGFDPDARPGRDEPFTVVVLDGVTVPEGHRWAGHGYRNALLLDVSGATRWRPGRNTLRLTVGPDTVSLVRTDRSRKERSVPLGRPDRLGPLGAESLARLLTSRRISLGTDIAQPLETDIELTTLLGIPDLHRHDAPAHFARQTGSARLRVPVAVGVDGRPVELDIKESAQGGMGPHGLLIGATGSGKSELLRTLVLGLALSNSSETLNFVLVDFKGGATFLGLEELPHTSAVITNLADEAALVERMQDALHGELMRRQELLRAAGNHTSALEYERARAGGADLTPLPSLFVVVDEFSELLSSHREFMDLFVMIGRLGRSLGVHLLLASQRLDEGRMHQLESHLSYRIGLRTFSAMESRGVLGVPDAYQLPAAPGNGYLKSGVESLTRFRAAYSSGTYARRTGAVARARVASQVVPWTSGWVVPRAPEPTAEPEPAAEEAGEEETLLAVALDRLRGSGPAAHQVWLPPLDTPVPLDTLLPGIAADPERGLTAAGWHGTGRLRVPVALVDKPFEQRRDPHVVDLSGAGGHVAIAGGSQSGKSTLTRTLITALALTHTPAEVQFYCLDFGGGGLSQLASLPHVGGVAARLNPERVHRAVAEVMTLLARREQFFVDHTVDSMQSYRRRRAAGEFPDEPFGDVFMVVDGWSTVRQDYDDLVPKFNELAARGLNYGIHLLISTTRWVELSAQVRDQSATRLELRMGDPMDSEVDTRKARSVPRTGGRGITPDTKMHFLAGLPRIDGSGSLEDLGEGVAHLVSEISRHWTGPSAPQVRMLPHRLPVAELPAPQPTEGGGMRLALGIDQDALEPVWHDFSRTPHLTVIGDTESGKTNLMRRITEGITARYAPNEAKIIVVDYRRTLVDTIPEEYRIGHVISLDNLKETVEGAARALKTRVPGADIAPSRMRRCDWWTGPRLFVLVDDYDMVSGNSFQSPFEPLFEHLTLGFEMGLHLVVARSAMGAGRAMSDALLRRLDEANNPGVLLSCPPTEGNLFGNTKPRNLPPGRALHVARRKARLIQTALVEDAPES
>NZ_CP036534.1|WP_166625942.1|2372372_2373674_-|S8-family-serine-peptidase
MRPLCGVALAAAVLLPVAAPAAAEPGGAVSAAAGVADGAHAVAGSAGTRAAAAGAPRAVPAADGKSQGLPPMPSAFDPGTQGVPCTAASPEKAEKQDWSRQRLDLARVHQHGAGAGTTVALVDTGVRAGAAGLGDRVTARGDAGDDCVGHGTFLAGLIVGEGWGDTRLPGVAPGAKLLALRGTDERGTADAALVARAVRDATAADADVIAIGVALYKRDKELTSAVADALDAGAVVVAAATPDPPNANATQETPTRTYYPAGEPGVLSVADMLPSGARPGDALPTDGVDLAAPGAGVVSGGPRGNGHYLGAGASVAAAYTAGTAAVLRAARPDDTPGEIVHRLTATAYPADIPQLDAYAAVTTVLGDADAGARSRTEAGPVTVRDTADADGAADRATVFVLLGAAGVLAVLWAVVAVPRARARGWRPADTARD

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Crispr_ID: NZ_CP036534_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_7

2359013-2359090

Orphan

Consensus_repeat	Method
GGTGACGGAACCGTCGGGGTTGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036534_7

>merge|NZ_CP036534|7|2359013-2359090|CRISPRCasFinder
GGTGACGGAACCGTCGGGGTTGGTCACCTGCGCGCCGTGGGTCAGGTCGGTGGTGGTGACGGAACCGTCCGGGTTGGT

>NZ_CP036534|7|7|2359013-2359090|CRISPRCasFinder
GGTGACGGAACCGTCGGGGTTGGT	CACCTGCGCGCCGTGGGTCAGGTCGGTGGT
GGTGACGGAACCGTCCGGGTTGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_031033810.1\|2317933_2318992_+\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|336482
NZ_CP036534.1\|WP_166625941.1\|2323515_2327913_-\|lonely-Cys-domain-containing-protein	unknown	unknown	gnl\|CDD\|380151
NZ_CP036534.1\|WP_166624024.1\|2320727_2320874_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_070388008.1\|2378493_2379150_-\|type-VII-secretion-system-associated-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP036534.1\|WP_031033826.1\|2357610_2358066_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|376829
NZ_CP036534.1\|WP_031033845.1\|2366149_2367556_-\|type-VII-secretion-integral-membrane-protein-EccD	unknown	unknown	gnl\|CDD\|274855
NZ_CP036534.1\|WP_166624028.1\|2368017_2372064_+\|type-VII-secretion-protein-EccCa	unknown	unknown	gnl\|CDD\|274858
NZ_CP036534.1\|WP_031033824.1\|2357219_2357609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_051159631.1\|2320917_2321991_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236612
NZ_CP036534.1\|WP_031033819.1\|2322850_2323456_-\|SseB-family-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_037765663.1\|2373754_2377069_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|163057
NZ_CP036534.1\|WP_031033835.1\|2362980_2363289_-\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|274862
NZ_CP036534.1\|WP_166625943.1\|2377144_2378401_-\|ricin-type-beta-trefoil-lectin-domain-protein	unknown	unknown	gnl\|CDD\|238092
NZ_CP036534.1\|WP_166624027.1\|2364172_2365810_-\|type-VII-secretion-protein-EccB	unknown	unknown	gnl\|CDD\|368288
NZ_CP036534.1\|WP_070388003.1\|2362371_2362842_-\|type-VII-secretion-system-associated-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624025.1\|2322217_2322694_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP036534.1\|WP_037765629.1\|2319035_2320541_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP036534.1\|WP_166625942.1\|2372372_2373674_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|274856
NZ_CP036534.1\|WP_031033838.1\|2363376_2363712_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223285
NZ_CP036534.1\|WP_166624023.1\|2312930_2317787_+\|protein-kinase	unknown	unknown	gnl\|CDD\|367616

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_031033810.1\|2317933_2318992_+\|rod-shape-determining-protein	gnl\|CDD\|336482	pfam06723, MreB_Mbl, MreB/Mbl protein. This family consists of bacterial MreB and Mbl proteins as well as two related archaeal sequences. MreB is known to be a rod shape-determining protein in bacteria and goes to make up the bacterial cytoskeleton. Genes coding for MreB/Mbl are only found in elongated bacteria, not in coccoid forms. It has been speculated that constituents of the eukaryotic cytoskeleton (tubulin, actin) may have evolved from prokaryotic precursor proteins closely related to today's bacterial proteins FtsZ and MreB/Mbl.	4.03085e-148
NZ_CP036534.1\|WP_166625941.1\|2323515_2327913_-\|lonely-Cys-domain-containing-protein	gnl\|CDD\|380151	NF012197, lonely_Cys, lonely Cys domain-containing protein. This model describes an unusual domain, over 700 amino acids long, that is largely restricted to the Streptomyces (prodigious producers of natural products) and that may occur ten or more times in giant proteins. The most striking feature is an extremely low cysteine composition, one residue per domain, and that in an essentially invariant position.	0
NZ_CP036534.1\|WP_166624027.1\|2364172_2365810_-\|type-VII-secretion-protein-EccB	gnl\|CDD\|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	5.83543e-88
NZ_CP036534.1\|WP_070388008.1\|2378493_2379150_-\|type-VII-secretion-system-associated-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	0.00177896
NZ_CP036534.1\|WP_031033826.1\|2357610_2358066_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|376829	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family. This is a family of DNA-binding proteins. Members of this family form homodimers which bind DNA via a tweezer-like structure. The conformation of the DNA is changed when bound to these proteins. In bacteria, these proteins may play a role in DNA replication-recovery following DNA damage.	1.11967e-05
NZ_CP036534.1\|WP_031033845.1\|2366149_2367556_-\|type-VII-secretion-integral-membrane-protein-EccD	gnl\|CDD\|274855	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD. Members of this family are EccD, a component of actinobacterial type VII secretion systems (T7SS) with ten to eleven predicted transmembrane helix regions. [Protein fate, Protein and peptide secretion and trafficking].	4.39872e-37
NZ_CP036534.1\|WP_166624028.1\|2368017_2372064_+\|type-VII-secretion-protein-EccCa	gnl\|CDD\|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP036534.1\|WP_051159631.1\|2320917_2321991_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236612	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional.	2.44865e-34
NZ_CP036534.1\|WP_037765663.1\|2373754_2377069_-\|AAA-family-ATPase	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	5.21711e-86
NZ_CP036534.1\|WP_031033835.1\|2362980_2363289_-\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	4.89821e-07
NZ_CP036534.1\|WP_166625943.1\|2377144_2378401_-\|ricin-type-beta-trefoil-lectin-domain-protein	gnl\|CDD\|238092	cd00161, RICIN, Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.	1.94644e-29
NZ_CP036534.1\|WP_166624025.1\|2322217_2322694_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	4.48049e-07
NZ_CP036534.1\|WP_037765629.1\|2319035_2320541_+\|GAF-domain-containing-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.37745e-15
NZ_CP036534.1\|WP_166625942.1\|2372372_2373674_-\|S8-family-serine-peptidase	gnl\|CDD\|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	9.79105e-42
NZ_CP036534.1\|WP_031033838.1\|2363376_2363712_-\|hypothetical-protein	gnl\|CDD\|223285	COG0207, ThyA, Thymidylate synthase [Nucleotide transport and metabolism].	0.00204605
NZ_CP036534.1\|WP_166624023.1\|2312930_2317787_+\|protein-kinase	gnl\|CDD\|367616	pfam03704, BTAD, Bacterial transcriptional activator domain. Found in the DNRI/REDD/AFSR family of regulators. This region of AFSR, along with the C terminal region, is capable of independently directing actinorhodin production. This family contains TPR repeats.	1.03197e-27

>NZ_CP036534.1|WP_031033826.1|2357610_2358066_-|YbaB/EbfC-family-nucleoid-associated-protein
MTEPLEQRLEKAMAELRSAQEAVERTERELRQASFAVLSSDRAVRATVGPQGELTGLDFLEYKYRDMSPQELAASVLEAASAAREKMNRHVMKAMAPFAEPSSEVPELKGFELDWERIFGPGVLEKADQDTDRTDGAAPGWRDALGEDGED
>NZ_CP036534.1|WP_031033824.1|2357219_2357609_-|hypothetical-protein
MGQRYYVDPARIEALSGQLEEIATLARSMTEEFLDGLAPTVSWPGTSGDFAEKAKPQEQKERQTTKDTMMSIRDALVSITDATLSQVKLMEDTRDRNLEDIERNTSRIETDGFGLDGSGGGDTGGHGRH
>NZ_CP036534.1|WP_166625941.1|2323515_2327913_-|lonely-Cys-domain-containing-protein
MEGVEMTSAPALSPAPAPPSAPAPTTPAPPVFTGPAAPSPAALPPRSLVAYAREATVPSPAGRETIERLAHQVAAAGLHNRREGWAPPRVEVTGYGADGQGNRGLKRATAARNHFLRQLAQALDQLQRNLPADAPRLTAQDFRVKALAMTRVPDGWTGTGGLAGVSRADLGRQAAIRVVQAPDASATQTLDALRRRDRVLRHSPLDVDALAARVLHLDPGTVVDQGTRDALFALVNRAAAAGRATSLPALAAHHLAELGVTDPGRARHFTAGGRRVPGLNWDPDTDSAAELDTSRGDVLEDTGPGPYTVAETRPAPWPPGTTPYVVAAGGRHDKVEVLLPDGTTRDLDADEFAELVAADVARERLPKDTPLVLAVPFAGDQYLDLPRTLADRTGLTVWAHSGEVTLSSDHGVSTVDTVRRPGSPEGDWTASEPGLAPDPDDDVPDWYQQVATRPIVSALTGKQIGRASHHAGEWATAFEDDDRHLDRMTTYVHYYPATGQVSAERELPRPGAENAAYRLDMHGSPGHLHLAMRDGTVRPVDEREAGPWLRRRKSLSSLPKDHWIDFVVCWSGAPRDRAVPVSPNTASDAYAGPFVPDPLSSLSMGQQLANSTGRSVRLSYSSQGTRSHGGRYTRTLFADAQGRHRAWALFRPDPSGADLDRLAALAGLAPGDGEVSDEMRAGTLRLVRALRLTFGHDVDDAADFGDLLRGVAAVDHMWRSDTDFDAAGPFTLDLLNRVVAAHPEAASGVDRAAVRRVLAAAADHWAAWPGDELVGFAEVPAIEEAAQWMRDGDLEDEAVTALDLSGPHQVGEAVRSRMFWARVKAEETLRAPGTDLNVRVPKVLHLRPGTRPAGHRDTLLDLLTRAFATGRDAADPDVAAAYDLDESGVYAATGVETVHGGESGDGRDYTAEQAPTTVDLAEFGTPSGTADAPWAGRKGPAPYLVRVTPDGNAPDLLELSFDGETHRVAAGEFLELLAHDTSLAGKELNVPVVLAFSAHDGDPGDLAERIAQRLGRTVWWTGFPADLSATGTSGEPVLTLRPTPDGDVPDAAAWEKARPAQATSPGDAPRPVQAPLARAGAAPLLESFPALTLNDDTDPDTDAEAADSGPDADDADADAEPRGGTEGRAGDLPAPDWVLSRIRYAQEALLFEQRLAAHLGENEQVNAELGKVVRAFWSITLHNRLDYRLFGSRNEMSAGAVGQRYEALARVVDSGNLRERVTFLFNGVAKDLVPHLMGGVEPQHPVIGVERRDRHRSQLFQEYERRVAELRAAELDPEDEAQEMEDLEAMLRTPLRPDEVSPPLSEAEWRRAVRDGELLWSPASMEHTLPMAADFQARSEESGGLVLTGTSGSAYRILTHVARLTRLAGVPVDLGLVRAGLASILVGVGHHSFHEVMTGAQLALDEFDPGATSVYSDNWGRYWDVYPLTEEELRASVAREGLFPDEHARALLTRLEAERTAGTRQ
>NZ_CP036534.1|WP_031033819.1|2322850_2323456_-|SseB-family-protein
MSESGAETPAAANPLDPAPPQEYVEAARLAPDHWLYLPDPAWRGEGPPPDWAVVGQWRSDSDGTIVEWEDNPEYRPSPEAMGWPEPADAVDRAIQLATTGYGPAEDVTAALAGAEVAVLVTADGEPVRASAPDGTPAVPVYTSARYLHAAGRLASAHLPVSTLLTRVPPDHALYLNSNAPVGMVLPTQGLADLLEEEPRPQ
>NZ_CP036534.1|WP_166624025.1|2322217_2322694_+|peptidoglycan-binding-protein
MRTALTRTFVGAATVFAIAAGSLAGATVSSAASEPAARPAAGTQEVSVLAVTNLGLTVGRAKSWQCFLTRSGYEPWEHAGLLGTDSWKAAQRMFNARGFSGKSKLVVDGVVGPLTIKALQRFLNDFGFGLAVDGIAGKRTSAAFYEFNGVPMPNDPRC
>NZ_CP036534.1|WP_051159631.1|2320917_2321991_-|helix-turn-helix-domain-containing-protein
MEGTDQRGNASGRGRTAAGAGRGAVLDASVVAPREREDTIRHALWASFSRVDIDHHTSQEDIGARMGLGAVGPMKVCSAQGTPVSLRRTERLAREDHEPSVFLGLQVSGTNMVGQHGRQCLVGPGNLVVFESTAPYTLRFEERFGYLSLRIPREALALPERVLREAAAVTLGPGNPTARLAFTYFSQLAASEELRGGAHAEALVGPSVELLRAVVTSQLGDAGAGRALPEVPLGMRVTQYVRAHLADPDLSAQRIAAAHGVSVRHLYNVLSRSGISLGDWIRTRRLAECRRELAGPGARTRTIAAIGRRWGFVDATHFSKAFKQAYGMSPRAWRELHQPGPARPRRPARRRVDVPAG
>NZ_CP036534.1|WP_166624024.1|2320727_2320874_+|hypothetical-protein
MSEPTPSQAEGERDEDRNGTADVPHSTPSQAEGEREEDETVPGGPEDR
>NZ_CP036534.1|WP_037765629.1|2319035_2320541_+|GAF-domain-containing-protein
MTAQPAPRLTRLLEAVLAGTGTELDLPGTLRHIAEGAAELTGADRADLVVADPGRDSPTEIRAPAPGPGAPAGPQEGAPGLRVPILVGDEEFGELRLTGRPGAGPFTAEDEQLLRVLATQAGISIGNARLYETARQRERWIEGAAAVTTALLTEESADDALTTVAERARLLADASAGVILHPTAEGGMAIVTASTPDDPDGMLGATIEPGSPVLEQLLGGEPVFLTDSATDPRMTTHVRHRFGPSMMLPLQANGRLIGTLALPRRRGARRYTDLERLLATQFASQAALALVLADARRGRERLAVYEDRDRIARDLHDLVVQRLFATGMMLESTERRRGAEDVRDILVRAVDELRSTVQEVRTTIFALQQPPAEPPTGLRGRVLRETAAAAARLGFAPSTRFSGAVDTRVPAPVADRLVTALRHALADACARGEVSRVEVAVDTAAPLADGRAGVRLTVFDDGAGGGAEDGAETDGRDGDEPDGDGGGYRGAGTTVTWWSPL
>NZ_CP036534.1|WP_031033810.1|2317933_2318992_+|rod-shape-determining-protein
MTASTASTASLEALRRCHFAVDLGAARTRVYVKGVGLVVDQPSAAAVNTRTGALIAVGEFAERMTGRTPGYIRVVRPVSGGTVVDIEMAQRMLRHLLGDRVRRALRRKPRLRAAVCTPHDADPLSQRAAIETLVGLGARRVELVDTLIAAAVGCGLPVEQPEATMIMVCGKHATQVAVLSLGSIVTAVRIPVGGEAVDHAIVQLLRHQHELVLPSQSVRPLQLALAGNGLTPQGPSSTEIHGRDVATGLARSVRVDTATVRNAIQTPLTAVLDGIGKVLRDCPPDLVADLADRGIMMVGGSALLPGFDQMLRQSTGMPVHIAERPDVCAVQGLGSMLEGRVEPLVLHPTAAD
>NZ_CP036534.1|WP_166624023.1|2312930_2317787_+|protein-kinase
MPADRPGPPDPLPHLADILGRASSGARPTPLELAELLWLAGQMTPAPDPPDGPAADGTVPEAAAGTFPPPDPVRRPAPDRDLDRDRHHRHGPGREQGQGRDSGQDRPVPGPPPAADAPGTPLRLPSSTMPAPGTSAAEPHSALLAPAPPMLRHTLALQRSLRPLKRRTAAPVGHEVDESATADRIARLGGGPEWWLPVLRPVRERWLRLHLVHDAGPTMPVWQPLVRELHDALAQSGVFRTVVLHRADADGTVGGDGFQAPADGRTVTLLISDCMGPQWREGEAGTRWFGTLRRWARHTPLAVLQPLPERLWRDTALPPVPGRLSAPHRAAPSSSLAFTPYDDTAPPAPRGAVSVPVLEPGPRWLANWAALVASPGGTTHPGAAATLHRPLPADADDRTDLARLSPEDLVLRFRARASREAFRLAGHLALGRPDLPVMRLVQAAVEPDPRPQHLAEVILSGLLTAVAGPPGSYAFRPGVRDLLLRGLPRTARNRTHELLLRTGGLIDERAGRSPGEFRALIPSRGGTERADGGETFAVISEDSARQLGVPAPPGAPSPFPRALGDRYRPVRRLAPTGRVWLAEDTGAGRTVAVRLHDRLPGAAGAAARRAFLRDARRLTEFTHPNVVAVLDAGVEDDVPYVVMEHLDGIAVNALARAGEGRLPAPLTVSLAAQLARALTALHRAGLTHGGVEASRLVLLPDGTVRLSLLEPGLSSGRAGRSADLRALCAVLLELCAGTSRLTVPIDSRRLDRLPADLRIDYAHAFDQLMSMDPSAQARGLDLLTDPRLLATAEETYTPRRYRALGPLRVTLPDGSPALPPDERALLTMLLLKHGRTVTHEELRYGLWAPGDEPRDPRRELIRLAARLAEVLGPGVLATPSHGYALHTSADHVDLVHCDELVRRADAARLAGALTEARDLVTEALSLWHGSEPLTGVPGWGAHTARARLLRLRLALHTRRAELDLSLGDYDRASADLAGLLRAHPHREDFRRLYLIALRRQGRGAEALEVYEEYELSGGRSPALTALGRELREEHAGPVDDAPWSEYEDPPDAPDTSPDAGADARHGALSAPDELPEGPFPTEDDFWAWPPEEREEPERHAAEATDGELVGAWGNPRAEDSGPHLPEEEYADADEGPTAERGPGAGPEDEAADADAGLDTDYRNCARYSLADGRHGDRDRAAALHVLVSHLLAESGLDGAAYELLDDRDGLLVLLAPRVEAVPLLRATVAGLPGQLAHLGGARLRAEFWQVEFQLDGAQEVQSLRADAESVAAVLDASAAQAVVALSDSLYYDEVYDQEGPDGLLLPPGLFRPLADDTGWYRLIDEGTGGESDGGTGGEPEPTTAPEPAREPAPAPDGGPVRGASPLPPGGRPPLPAGSRPRAVAPRSPADLVSGARCVLLGFDDVLARLYRPAAEREVLLDVLRLFADERDPEDALAGLPLPRAATDGYAGTLDFVRALAGHRLDPDVRLRLDRHEARAARTARPVPLADRLVQALDTRGVPVAVVTDRAPAPVTSYLRRRGLLECLRGDVHGRDTDLTRLMPDPDVLHRALERLDADAGDCVLVGSSVAEQTAARAAGLPFVGRYGDEPARRRLTGADGDALLVPDLRPLLTAAENR
>NZ_CP036534.1|WP_070388003.1|2362371_2362842_-|type-VII-secretion-system-associated-protein
MADNPTDIKHFDLSAMENFRDYEVDRAYKDAKRHREGGGDGDPRTLGDLIDGHTTEDNLDQSQQLLRIGKMASDGRVSGPKLLEGVREAATALDKLLGDQIDLYKELQDALTDTIEGAQKTQAKNLDAIDAQTLLQHFDEVDTLTAGGSGGEDSDS
>NZ_CP036534.1|WP_031033835.1|2362980_2363289_-|WXG100-family-type-VII-secretion-target
MADGIIDVQYPVVRRAVEEMTEQTQQIINALNNLEDELKPLVASWEGSDQEMYRQVQMEWDQATKNMATLLNDNGTLIQSIHDNHSRDERRSADNWGNVRAR
>NZ_CP036534.1|WP_031033838.1|2363376_2363712_-|hypothetical-protein
MADSAARKADYAKGLGGVSSLESARSQVEKIQNNVAEIAARSGVGGDEGQALLKLFRSWNTEAQTVVVQISKMIDALQENVTSANRLAQENQDLTEVLNSKTSQGVFQALL
>NZ_CP036534.1|WP_166624027.1|2364172_2365810_-|type-VII-secretion-protein-EccB
MQSKRDQVQAHSFMMGRLSSGLLTAAPDAPESPLGRTTRGVVFGLLFTVLIGAGTVVYGLLRPGGNDGWRDGGHLVVNRDTGARYLWTDTDGVLHPVRNYTSARLIGGSDLPTEDVGTASLRDVPVGGPVGIPGAPDGLPDAGQLDGGAWNMCVTGPDGADPSTSGAAAAPAVDAAGATTLVVGAPVDSAAVGRDRGVLVSGPDKTQYLVWRGSRLPLDEKSDARTALGYGSVSAAPVSAAFLDALAPGPELRSPDVPGRGGEGPELGGEATRVGQVFEVSVPGGESTYHLLREEGLVPLTRLGAALVLGDPATQKDAYRGESPEARTVGADALREHQAEGAGGDEAAGLPDAPPAPQSVPRGSALCAQVDGGDGGARIGSVLAPLTELAPVAVPEGTADPVREACVPTDATVVRPGHGALVRALHASGAAHAGTTYLVAENGVKYRVPADDSLQALGYTTGDIDSVPAPLLAALPTGADLDPDAASGAAEVRVTAPDCGTDAQQEEAAPGKKAKAASFVTGDPAAAPGIADTAPRPRQDGQSGF
>NZ_CP036534.1|WP_031033845.1|2366149_2367556_-|type-VII-secretion-integral-membrane-protein-EccD
MTDSTVAELCRLTVRAPSVSVDLAVPADVPVTDLLPTLLRYVGEEVEEAGLDHAGWVLQRLGDAPLDEETTLARAGLADGEVLYLRPHTEVLPEARLDDLVDGISDTVGRRMYTWSPKAARGLLGGTAVATVVLALVLVFWPGVDGSGSLRVICAGVAGLLALAGAGSASRAVGDRLTATVLGLLVAPCLALAGWVLPGGDLTGPDTARVVGARLLAAGAAGAGGAVLALAATAVGAPALFATALVAVATAIAGALIGYTGLDAPAAVALVMAVLALGAGAVAPFAFKLAGMRMPALPSSASQLQEGIEPYAGDEVAERTELAGRWVTALFAATGTAAVAALVVLAERPDLPEVLTALVLSLLLLLHSRGLVAVGQRLTLALPGVLGLLLLARAWAVDSDGDMRLVVFAVLLAAASALVIATWTVPGRRMLPYWGRAAELAHTVFAVALLPLTLWVAGLFGWLRGLFG
>NZ_CP036534.1|WP_166624028.1|2368017_2372064_+|type-VII-secretion-protein-EccCa
MPEGQLTLQEPPVLSETVPDTSTIWTYLPMALMSMSMMLMFLRPGGGNGVFMYLALGVMALSAAAMLLGQLMRRSGERKQRLKGERRDYLRYLTQIRKRVRATVVEQQRALAWRHPDPASLRSLARTSRLWERRPADEDFGEVRLAVGEQQLALSLNPVSTRPVEDLEPLCAHALRRFIRAYSTIPEQPIGLYLRSSARILLRPEDAADEDGAAPEVPPQGQALGGTGGTAGAGTGVRATSPADEALAALVRAVLAQLAVFHAPEELWIAVCASDDRRSDWEWAKWLPHVLDPHEEDGAGSVRRITADLTELDDLLGSEFAERPGFDPDARPGRDEPFTVVVLDGVTVPEGHRWAGHGYRNALLLDVSGATRWRPGRNTLRLTVGPDTVSLVRTDRSRKERSVPLGRPDRLGPLGAESLARLLTSRRISLGTDIAQPLETDIELTTLLGIPDLHRHDAPAHFARQTGSARLRVPVAVGVDGRPVELDIKESAQGGMGPHGLLIGATGSGKSELLRTLVLGLALSNSSETLNFVLVDFKGGATFLGLEELPHTSAVITNLADEAALVERMQDALHGELMRRQELLRAAGNHTSALEYERARAGGADLTPLPSLFVVVDEFSELLSSHREFMDLFVMIGRLGRSLGVHLLLASQRLDEGRMHQLESHLSYRIGLRTFSAMESRGVLGVPDAYQLPAAPGNGYLKSGVESLTRFRAAYSSGTYARRTGAVARARVASQVVPWTSGWVVPRAPEPTAEPEPAAEEAGEEETLLAVALDRLRGSGPAAHQVWLPPLDTPVPLDTLLPGIAADPERGLTAAGWHGTGRLRVPVALVDKPFEQRRDPHVVDLSGAGGHVAIAGGSQSGKSTLTRTLITALALTHTPAEVQFYCLDFGGGGLSQLASLPHVGGVAARLNPERVHRAVAEVMTLLARREQFFVDHTVDSMQSYRRRRAAGEFPDEPFGDVFMVVDGWSTVRQDYDDLVPKFNELAARGLNYGIHLLISTTRWVELSAQVRDQSATRLELRMGDPMDSEVDTRKARSVPRTGGRGITPDTKMHFLAGLPRIDGSGSLEDLGEGVAHLVSEISRHWTGPSAPQVRMLPHRLPVAELPAPQPTEGGGMRLALGIDQDALEPVWHDFSRTPHLTVIGDTESGKTNLMRRITEGITARYAPNEAKIIVVDYRRTLVDTIPEEYRIGHVISLDNLKETVEGAARALKTRVPGADIAPSRMRRCDWWTGPRLFVLVDDYDMVSGNSFQSPFEPLFEHLTLGFEMGLHLVVARSAMGAGRAMSDALLRRLDEANNPGVLLSCPPTEGNLFGNTKPRNLPPGRALHVARRKARLIQTALVEDAPES
>NZ_CP036534.1|WP_166625942.1|2372372_2373674_-|S8-family-serine-peptidase
MRPLCGVALAAAVLLPVAAPAAAEPGGAVSAAAGVADGAHAVAGSAGTRAAAAGAPRAVPAADGKSQGLPPMPSAFDPGTQGVPCTAASPEKAEKQDWSRQRLDLARVHQHGAGAGTTVALVDTGVRAGAAGLGDRVTARGDAGDDCVGHGTFLAGLIVGEGWGDTRLPGVAPGAKLLALRGTDERGTADAALVARAVRDATAADADVIAIGVALYKRDKELTSAVADALDAGAVVVAAATPDPPNANATQETPTRTYYPAGEPGVLSVADMLPSGARPGDALPTDGVDLAAPGAGVVSGGPRGNGHYLGAGASVAAAYTAGTAAVLRAARPDDTPGEIVHRLTATAYPADIPQLDAYAAVTTVLGDADAGARSRTEAGPVTVRDTADADGAADRATVFVLLGAAGVLAVLWAVVAVPRARARGWRPADTARD
>NZ_CP036534.1|WP_037765663.1|2373754_2377069_-|AAA-family-ATPase
MSRQVLSVGPDDRDRFRTIGEALAAARTGALISVRPGTYAENLVIHTRVTLTAAEGRGTVEIRPRSGSVVALRADAVMLSELTLRGADAEAPAVDVRRGQAALDGCEIAGAAWTALLAGGTGSLALRDCRVSNSQGAGIVVTSTTPTTVESCTLEHLGTSGLVVAEQGEVRVRGCTVRDARGNGVLANGDSRGSLEDCDLSSTDKPSLALEGNSTLTVSRTVVHDTSNGVHLSSAGRTTLEDVRITGASGTGITLAAGTDPVLRRCRVSRTRGHGVVVTDRARGTFEDCWIDGAQGVALRVAGAASPALTGLTVRDCAETGLLLEEDAAAELDRLEVIGGAPAIALRAGANPLLRRARLVEPSGDGITATGDARGRVEDCEIVQPGGSGVRAASGSTLYLAGGGVSGAVDSGLVLEDGGSVTVRDFRVENSGAEGVVVDSGGELTANRTSVLTPQGHGVLLREGAIASLSGCEVAGGAQDGFRVETTAPVSLVNCLARENEGGGLVQTTPGERLAVEGLSSTGNGKRDAWGSGSAENTDPAGSGAADGPAQDRPDGPLGALNALIGLDNVKEQVRTLVNLTQLAQRREQLGMSAPPMSRHLVFTGPPGTGKTTVARLYGAILAELGSLRDGHLVEVSRADLVAQVVGGTAIKTTETFERALGGVLFVDEAYTLTSDSGHGGADFGREAVDTLLKLMEDHRDEVVVIVAGYTDEMTGFLASNPGLGSRFSRTVEFENYTVPELVAIMESMCAAHQYELGEGTAAALAAHFDAMPRGAGFGNGRAARGVFEEMVDRQAVRLATLQQVGERDLRLLLPEDVSEAAAEQSAETGVPENDPLTRLGDMVGLAEVKRDVTDLVNLITTARHRAAAGLPVPSLSHHLVFTGPPGTGKTTVARLYGEILSQLGILPRGQLVEAARADLVGRYIGHTAQLTREVFERARGGVLFIDEAYTLTPRGGGNDFGQEAVDTLLKLMEDHRDDVVVIVAGYTGEMERFLSSNPGLASRFPRRIAFADYSSEELVTIVRTQASAMGYECGPGTGPLLREHFDSLPRDQSFGNARLARQVVESMVTRQAGRLSSLAAPTLEDLRVLLPEDVTAATPKAAR
>NZ_CP036534.1|WP_166625943.1|2377144_2378401_-|ricin-type-beta-trefoil-lectin-domain-protein
MPESKSKSKSESPVSTTAEGSASGSGAESFPEVKPEAGTAPAGEAQSTAEKAPKAEKAPKAEEAEEAEEAEAAEREPVALALAQAADGPAEDSGTGTGTGTAAGPGVDTDADAGGASAAKSRLPLLVRTMTATAIDKPDDAVRPVGRPGRAVLAAAAVGGALLVAVPFLLLGPDDEDKEDRASTTAATVLGGDQEEETGDFAVSPPEAGDPADDEKESEKPKAPPAPKTDSGDAEKAAAAEKAEKEKKAAEEKAAKEKAEKEKKAASEQSSKDSGKDVAKNGGNAAAGPALGFPVSFHSHLSGRCIDVPASAFTDGQGLWMWDCNNTDAQKFQFASDGTLRLKGLCMDVAGANFANGTPIQLANCTGVDAQKFALNEAHDLVNTAVGMCVEIEGHDHNAQARVQLWTCTGLDNQKWSV
>NZ_CP036534.1|WP_070388008.1|2378493_2379150_-|type-VII-secretion-system-associated-protein
MEATSGTPASSPGPGAVEAGDTPEIPEAVRAAARQAPGHWIGVVDPEWPEERTPPEWAVLGEWRSGDEGDVGTYRANPAYRPSARALGWPEPTDPVDAAAQRAATGYGSVDEALAALAAAEVTVVAGPDGAPLAAAGQDGEPVVLVFTSPAHAFMSATLRHETLPARELTRSLAGSPTLSLLVNAGAVAPLLVPAARVPVDGGEDPPGPLTHTSGRYP

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Crispr_ID: NZ_CP036534_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_8

2971987-2972111

Orphan

Consensus_repeat	Method
GTGCCCTCGGACGTGCCTTCAGAGGTGCC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP036534_8

>merge|NZ_CP036534|8|2971987-2972111|CRISPRCasFinder
CCGCCCTCGGACGTGCCCTCGGAGGCGCCGACCGAAGTGCCCTCGGACGTGCCTTCAGAGGTGCCTTCGGAGGTGCCCTCGGACGTACCTTCCGAAGTACCTTCGGAGGTGCCCTCGGACGTGCC

>NZ_CP036534|8|8|2971987-2972111|CRISPRCasFinder
CCGCCCTCGGACGTGCCCTCGGAGGCGCC	GACCGAAGTGCCCTCGGAC
GTGCCTTCAGAGGTGCCTTCGGAGGTGCC	CTCGGACGTACCTTCCGAA
GTACCTTCGGAGGTGCCCTCGGACGTGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_166624180.1\|2965413_2966832_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP036534.1\|WP_166625967.1\|2962335_2963169_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP036534.1\|WP_031043430.1\|2969313_2970231_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225088
NZ_CP036534.1\|WP_166624184.1\|2984445_2985363_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP036534.1\|WP_166624185.1\|2985534_2987913_+\|bifunctional-glycosyltransferase-family-2-protein/CDP-glycerol:glycerophosphate-glycerophosphotransferase	unknown	unknown	gnl\|CDD\|367953
NZ_CP036534.1\|WP_031043469.1\|2990256_2992482_+\|bifunctional-glycosyltransferase-family-2-protein/CDP-glycerol:glycerophosphate-glycerophosphotransferase	unknown	unknown	gnl\|CDD\|367953
NZ_CP036534.1\|WP_166625968.1\|2977363_2981239_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|366133
NZ_CP036534.1\|WP_037768592.1\|2968063_2969182_-\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|223864
NZ_CP036534.1\|WP_031043446.1\|2973941_2975186_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP036534.1\|WP_031043433.1\|2970273_2970963_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438
NZ_CP036534.1\|WP_166624183.1\|2981608_2983003_+\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
NZ_CP036534.1\|WP_070388241.1\|2971178_2971370_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031043421.1\|2967506_2967986_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|376590
NZ_CP036534.1\|WP_037768573.1\|2988042_2990250_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|367953
NZ_CP036534.1\|WP_037768598.1\|2960140_2962336_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|200584
NZ_CP036534.1\|WP_166624179.1\|2964358_2965330_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP036534.1\|WP_037768580.1\|2983070_2984354_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP036534.1\|WP_166624178.1\|2958725_2960144_-\|acyltransferase	unknown	unknown	gnl\|CDD\|376607
NZ_CP036534.1\|WP_166624182.1\|2975297_2976971_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP036534.1\|WP_031043441.1\|2972698_2973805_-\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_166624180.1\|2965413_2966832_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.12815e-20
NZ_CP036534.1\|WP_166625967.1\|2962335_2963169_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	8.38733e-07
NZ_CP036534.1\|WP_031043430.1\|2969313_2970231_-\|ABC-transporter-permease	gnl\|CDD\|225088	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning].	1.85356e-56
NZ_CP036534.1\|WP_166624185.1\|2985534_2987913_+\|bifunctional-glycosyltransferase-family-2-protein/CDP-glycerol:glycerophosphate-glycerophosphotransferase	gnl\|CDD\|367953	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.	1.69785e-128
NZ_CP036534.1\|WP_031043469.1\|2990256_2992482_+\|bifunctional-glycosyltransferase-family-2-protein/CDP-glycerol:glycerophosphate-glycerophosphotransferase	gnl\|CDD\|367953	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.	1.03444e-138
NZ_CP036534.1\|WP_166625968.1\|2977363_2981239_+\|FHA-domain-containing-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	1.4118e-19
NZ_CP036534.1\|WP_037768592.1\|2968063_2969182_-\|PDZ-domain-containing-protein	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	3.32212e-66
NZ_CP036534.1\|WP_031043446.1\|2973941_2975186_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.05234e-82
NZ_CP036534.1\|WP_031043433.1\|2970273_2970963_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	1.25362e-122
NZ_CP036534.1\|WP_166624183.1\|2981608_2983003_+\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	3.86968e-26
NZ_CP036534.1\|WP_037768598.1\|2960140_2962336_-\|glycosyltransferase	gnl\|CDD\|200584	cd10962, CE4_GT2-like, Catalytic NodB homology domain of uncharacterized bacterial glycosyl transferase, group 2-like family proteins. This family includes many uncharacterized bacterial proteins containing an N-terminal GH18 (glycosyl hydrolase, family 18) domain, a middle NodB-like homology domain, and a C-terminal GT2-like (glycosyl transferase group 2) domain. Although their biological function is unknown, members in this family contain a middle NodB homology domain that is similar to the catalytic domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Like SpPgdA, this family is a member of the carbohydrate esterase 4 (CE4) superfamily. The presence of three domains suggests that members of this family may be multifunctional.	1.28635e-92
NZ_CP036534.1\|WP_031043421.1\|2967506_2967986_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|376590	pfam01668, SmpB, SmpB protein.	6.61655e-84
NZ_CP036534.1\|WP_037768573.1\|2988042_2990250_+\|glycosyltransferase	gnl\|CDD\|367953	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.	1.5194e-164
NZ_CP036534.1\|WP_166624184.1\|2984445_2985363_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.08622e-75
NZ_CP036534.1\|WP_166624179.1\|2964358_2965330_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	8.5114e-25
NZ_CP036534.1\|WP_037768580.1\|2983070_2984354_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	8.23632e-41
NZ_CP036534.1\|WP_166624178.1\|2958725_2960144_-\|acyltransferase	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	1.22452e-18
NZ_CP036534.1\|WP_166624182.1\|2975297_2976971_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.17729e-103
NZ_CP036534.1\|WP_031043441.1\|2972698_2973805_-\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0

>NZ_CP036534.1|WP_070388241.1|2971178_2971370_+|hypothetical-protein
MTYDRLVCANCAAPVSEGRCPVCRANRERMQQESFFAGLNPVTLVALLAVLVAAVALLAHQTA
>NZ_CP036534.1|WP_031043433.1|2970273_2970963_-|cell-division-ATP-binding-protein-FtsE
MIRFDNVSKVYPKQSHPALRDVSLELEKGEFVFLVGSSGSGKSTFLRLILREERCTHGQVHVLGKDLARLSNWKVPQMRRQLGTVFQDFRLLPNKTVGENVAFAQEVIGKSRGEIRKSVPQVLDLVGLGGKEDRRPGELSGGEQQRVAIARAFVNRPKLLIADEPTGNLDPQTSVGIMKLLDRINRTGTTVIMATHDQNIVDQMRKRVIELEKGRLVRDQTRGVYGYQH
>NZ_CP036534.1|WP_031043430.1|2969313_2970231_-|ABC-transporter-permease
MRAQFVVSEIGVGLRRNLTMTFAVIVSVALSLALFGGSLLMSDQVNTMKGYWYDKVNVSVFLCNKSDAESDPNCAKGAVTADQKKQVMSDLDEMAVVDKVTYESQDEAYKHYKEQFGDSPLASSLTPDQMQESYRIKLTDPEKYQVIATAFDGREGVQSVQDQKGILDNLFGLLNGMNWAARAVMALMLVVALMLIVNTVRVSAFSRRRETGIMRLVGASGFYIQAPFIMEAAVAGLIGGGVACGFLVVARYFIIDHGLALSEKLNLINFIGWDAVLTKLPLILATSLLMPALAAFFALRKYLKV
>NZ_CP036534.1|WP_037768592.1|2968063_2969182_-|PDZ-domain-containing-protein
MFASVLATGAATGSFSGTDRKSEPEPVRSAAPAGDRDRHEDVARAAARAMADGKSPLEAAERAVSRSGDRWGAVYSRGEYEELEDALDGRYTGVGVSARRERDGGIEVTEVRSGSPAADAGIREGDRLRSVDGEEVDGRPVTEVVSILRGDAESAPAGTAVRLGLERGTRAWTETVRRARLSADSVTVRTLADGVTVVRVASFTKGVGARVREAAARVPSGTGVVLDLRGNSGGLVTEAVTAASAFLDGGLVATYDVDGDQRALHAASGGDTARPLVALVDGGTMSAAELLTGALQDRGRAVVLGSRTFGKGSVQMPSTLPGGSVAELTVGHYRTPSGRGVDGKGITPDLEVDPADPATLERARTVLSGLGR
>NZ_CP036534.1|WP_031043421.1|2967506_2967986_-|SsrA-binding-protein-SmpB
MAKEKGRKLIAQNKKARHDYQILDTYEAGLVLSGTEVKSLRQGRASLADGFVQLDGHEAWLHNVHVPEYSQGTWTNHSARRKRKLLLHRVEIDKLEAKSQETGHTIVPLALYFKDGRAKIEIALARGKKEYDKRQTLREKQDRREAERTISAIRRKQRA
>NZ_CP036534.1|WP_166624180.1|2965413_2966832_+|MFS-transporter
MPQPTPAHSSRTSSRSALSAPSRSSLPFRPSRPLPTHATSTPAHTPVLTVTADALVVADFGPRTRRPRRPPGPYRRLLATPGARAFTAGNLLARLPAGMFSVSAVVMIAGTRGSYALAGAVTATGLAATALAAPWTARLVDRYGQARAALPATLVAALGSLALLLCVRWDAPAWTLFAAYAATATTPNTGGMARARWAHLLKGDAGALHTANSFEQAMDELCFMLGPVLAAFLCTGLFPEAGTLVAVVLLVTGMLLFTAQRSTEPPARPRPNAKAPLRTPGIPALLVVCLATGGVFGATEVVTIAFADAQGHRAVAGAVLALQAAGSCAAGLLYGALKPAGPAARRLPWCVAAMAALLTLPLLAASLSGSLPLLALTLLVAGMATAPTMVTTMTLVQQRTPRDRLNEGMTLAVTGLLGGIACGSAAGGWTVEHVSPAAAYAIPVTAAATALLLALLSPRTPRHSLRNAAHRH
>NZ_CP036534.1|WP_166624179.1|2964358_2965330_-|LysR-family-transcriptional-regulator
MPAPAHLDPRLLRAFVTVAEDLHFTRAAARLYVAQQALSRDVRRLERELGAELFLRTTRQVTLTADGERLLPYARGVLQAQDDLLAAFGQARPLLVDLNSPGLVTGRLVLERARELAPELELMARYESGLAHAAAELLAGRLDASLGRFAGLAPALRAGLRHEPVRYEPMAVVLPEDHPLARLTEVPLSALAGETVYAGAGNPRTPEWTDLAHRLFEGRGIDVAPPLPLAVGEEEFQRIMDKTRNPILAVVSFPAMPSTVVRPLVEPVPLSPVSLVWRKGLVHPALEVLRRATSQVAAEKSWLRFPAGGWIPATDAAVMSVHK
>NZ_CP036534.1|WP_166625967.1|2962335_2963169_-|hypothetical-protein
MPTAGPGTAPLRDPWQQVPGANEDAEADAGDHTHDPHEVTVQLDAVQLGDGVIRRADSGHRKGKARPEASDGPVFVDSSGRRSRLYRRLGILVGIACAVYAVVIVSTLLSGNSDAPWLPVPGQEEGKPAGQVDTTPLPSESAQPSATGTATAPADDPSASTGVTTAPGSDTPAAGTSGATGGVTGQPGTSAGPESPAAGGTDPDPGGSAGTGRTDPDPGQSSSEQPGSTGPSAPTGDASTDPTAPTGAPTGTDAGAGGTNANGVSDQSLSLSPENTL
>NZ_CP036534.1|WP_037768598.1|2960140_2962336_-|glycosyltransferase
MASRTRRHGAARSARGGFRRRLPLRLLLPLLVLVALAAMLMLRGYVHSEILADHRVQPPAATDKVPEKILEGGPVIDVRGGRTEGLSVPDHRLVLTFDDGPDPTWTPRVLDVLKKHDAHAVFFVTGTMASRYPDLVKRMVDEGHEVGLHTFNHPDLSFQSTKRIDWELSQNQLAITGAAGVRTSLFRPPYSSFADAMDNKSWPVTEYIGSRGYITVVNNTDSEDWKKPGVREIIRRATPHGGKGAIVLMHDSGGDRHQTVQALDEFLPGLKEKGYEFDNLTEALEMPSAMSPVTGAELWKGKAWVFLVQASEKITDVLVVGLAVIGTLVIGRFGLMLLLSGVHARRVRRKRFSWGRTVTEPVTVLVPAYNEAKCIENTVRSLVASDHPVEVIVIDDGSTDGTARIVEGLGLPGVRVIRQLNAGKPAALNRGLANARHDIIVMMDGDTVFEPSTVRELVQPFGDPKVGAVAGNAKVGNKDSLIGAWQHIEYVMGFNLDRRMYDVLGCMPTIPGAVGAFRRSALEPIGGMSDDTLAEDTDVTMALHRAGWRVVYAENARAWTEAPETVQQLWSQRYRWSYGTMQAIWKHRRAVIEKGHSGRFGRVGLPFVSLFMVLAPLLAPLIDVFLLYGIVFGPTEKTVVAWLGVLAIQAVCAAYAFRLDRERMTHLISLPLQQILYRQLMYVVLLQSWITALTGGRLRWQKLRRTGVVEAPGGSVPRQRSRSSDDRRPVA
>NZ_CP036534.1|WP_166624178.1|2958725_2960144_-|acyltransferase
MTHGYTTGPGADPEPAGPYGHPYAPTQGASAGAPYDFPQQRTAAPVPEAGQGPVPEAGRGPVPDAGPDAGPGAGPAAGPAPAARKPGRDRYLDLLRSVALVRVVVYHLFGWAWLSILFPSMGVMFALAGSLMARSLKRPAWSVIRGRVRRLLPPVWAFSALALTLLFAGGWNPGDDPDQGGGAWGLVKLFNYLVPIGAPPYPWEAGAPLDWLEGSWADQAVGPLWYLRAYLWFVIASPLLLWAFRRAPWPTLLAPLGLTAVVGTGLVTIPGETGHAISDFAVYGGCWVLGFAHHDGMLKQVPRYVSVSCAALVMAFGLWWASGHQGDDGWDLNDIPLAQAAWSFGFVVILLQYSPSWRELPGRLAKWDKLVTLSNNRAVTIYLWHNLLIMATVPFVDLLYRVPFLQSERGMHAIDSSYTIWMFALVWPLIALAVLAVGWIEDLAAKRGPRLWPNGTKRPARGQPGSRAAHRG
>NZ_CP036534.1|WP_031043441.1|2972698_2973805_-|peptide-chain-release-factor-2
MAVVDVSEELKSLSSTMESIEAVLDLERMRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEALRGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQSPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRKQREK
>NZ_CP036534.1|WP_031043446.1|2973941_2975186_-|serine/threonine-protein-kinase
MARKIGSRYTAHQILGRGSAGTVWLGEGPEGPVAIKLLREDLASDQELVSRFVQERTALLGLENPHVVSVRDLVVDGNDLALVMDLVRGTDLRTRLDRERRLAPEAAVAVAADVADGLAAAHAAGIVHRDVKPENVLLDMQGPLGPGGSHPALLTDFGVAKLIDTPRRTRATKIIGTPDYLAPEIVEGLPPRAAVDIYALATVLYELLAGFTPFGGGHPGAVLRRHVTERVVPLPGIPDELWQLLVQCLAKAPASRLRASELSARLRELLPMLAGMGPLEVDEPDAEQEDDAPEESPASAEPAREPVRRRGAVPLVPGAKPADSNRDTHTSMRVPAPDELAGGARGTARAPRASGAPRPGSARNRAAARRRRLALGAGAVALVAAVGVGSWLAAGDDEDGTGPQDTRNSAPASP
>NZ_CP036534.1|WP_166624182.1|2975297_2976971_-|serine/threonine-protein-kinase
MRPVGSKYLLEEPLGRGATGTVWRARQRETAGAEAAVAGQPGETVAIKVLKEELASDPDIVMRFLRERSVLLRLTHPNIVRVRDLVVEGELLALVMDLVDGPDLHRYLRENGPLTPVAAALLTAQIADALAASHTDGVVHRDLKPANVLLKQTGGEMHPMLTDFGIARLADSPGLTRTHEFVGTPAYVAPESAEGRPQTSAVDVYGAGILLYELVTGRPPFGGGSALEVLHQHLSAEPRRPSTVPDPLWTVIERCLRKNPDDRPSAENLAHGLRVVAEGIGVHASSAQIGAAENVGALLAPDPAPAQVPGEPGAADPTQVLPHNAQHPSGGYDPNGATSVLPQTGNQRGAADPTAVMPPVPPGQPGGPGAPGQDGQQGGPEDPHPWQNQLRAARDRNEQTQVQYLDPNQDPLRRRPQRQVSRPQQPQQPPRQAPPSGYGYGQQQQPQRYATPQPQQPQQQPRPQPQRYAPPPAPEPQPPRREPRPPRQRSANPMRIPGLGCLKGCLVTIVILFVAGWLIWELSPLQDWIGTGKGYWAQLSDWFTSVTDWMKDVGGSG
>NZ_CP036534.1|WP_166625968.1|2977363_2981239_+|FHA-domain-containing-protein
MQIRLTVVDPLGPHAAAGDRAASCDVLVTAPAGTALAAVASALAAALPGGEGQHSGQVVLYAGAQRLDAQRGILGEPPLIDGAVLSLGAPGEPDAHTEPSDVPAQLHVVAGPDAGGVHLLHGGQIRLGRSADADVALDDPDVSRMHCAVTVGPDARVSVADLGSTNGTTLDGARVGDRPVRFAPGALLRIGESALRLVPVPPAAEVRVTTVPDGEGHVRLSGARVPRPGGGDGDTVAHARAADGAEGHTREAPAAPATGRGGGGGGGGGDQGTTAGPGGRTHHAYGTSGYATGAAPAGPPQVPGQAGAPRIESHGTGPTAGRPRQAPAAGETHGGGYDTGGLGADGRGAGGRGDDGRGTSGRGDDGRGADGHGGRTHGGDASGAYGPESAVRPGGADAGGYGAGPSGPRGPRTGTPAGGAHGEAPHHGEAPYGGTVYGGAADGVPTRADGTGRKGTPLRGTDVPPGVRRRGGIGAWARRLTGGRPDAQDAAAAGAHPYDHDEAPPGPAPSGAAGASTAPETWPDPASLLLTALGPGPRLWERGPGHPEALTVRLGTADRVAPGGDAPLPAVPVTAGLREVGALGLAGPRARLAGLARSVVAQLAALHSADVLEIVLISADRSRPLAERSAEWSWLGWLPQVRPGHGQDCRLLLAHDREQAAARAHELLRRLEDHLSDDGRTGATPLSGPAAAAGNRPAASGPGARRAGPVPDAHPGTTVPHADAAGPGDQGGIGHRPSWAHPDAGADPAGGFPGPYTVVVVDGDPGGADVRETVARLALEGPRAGIHVVCLAETAAASPTSPVARTYEAACAVSPVFRECGAVALLSGDVATTLRLLRVARTAGAPGAPHVPGNPAAAPAGPVGHGTLATVDAVSPAWAERFARALAPLRTDTAAGCAPDARVSAPLPQVARLLDELGLARATPASLMARWADAGDDPQALGGRAQAVLGAGARGPVVADLAAEGPHLLIEGPPGSGRTELLRALVASLASAERPDRLGIVLMDGRDGVSPGASHGEGLRVCTDVPHVTTHLTGNDPVRMREFAQSLSAELKRRAELLGRSDFAEWHTGRELSGRLVAQRTPPAGAPGQAGATGDGDIDSPPSSTMRLRPGAARRRASAVPPLPRLVVVVDDLDALVTPPLGSPGRPAAGSVMRALEAVAREGERLGVHLVAATAPGGRTDRTEPALRATLRVRLDAPVPGPDEPAPGRGRLTRPDGGTALFQGGRVTGRIPRTATLRPTVVPLEWHRMGDPPARRPVRELGNGPTDLALLASALERAAREVSAAEMPSLL
>NZ_CP036534.1|WP_166624183.1|2981608_2983003_+|carbohydrate-ABC-transporter-substrate-binding-protein
MRTSSTKGTRSTLGRTTRAAATLAAGALALSLTACGGGDDDKSGDDGKNGGDKQQPASVTLPKLDGESLEVAAVWTGTEQENFKKVLAEFEKRTGAEVTFVPAQDPIINFLGSKVAGGAPPDVALLPQPGAIKQAVDKGWAKPLGAEAAKELGENYSQGWQDIGTVDGKPYGVYYKAANKSLIWYNAQVFANAGAEEPKTWDELLTTAQTVYDSGVTPFSVGGAEGWTLTDWFENVYLSQAGPEKYDQLAKHEIKWTDPSVKEALTTLAGIWGKADYVAGGPTGALQTDFPTSVTQTFTGGDQPKAGMVFEGDFAQVNIGETEAEVGTDAKAFPFPAVGDTAPVVSGGDAAVILEDSKAAQALATWLASPDAASIQAKLGGFLSPNGGVDSSVYPNAVQKKIAEALVSAGDDFRFDMSDQAPQAFGGTPGKGEWKALQDFLKNPKDVAGAQEKLEADAAAAYGG
>NZ_CP036534.1|WP_037768580.1|2983070_2984354_+|sugar-ABC-transporter-permease
MTGTRRTVAALFLLPALVLLGALVVYPIGYSLIRSFYDQSGDSFAGFDNYRALFTDDGIRTALKNNVLWVVFAPTVATALGLIFAVLTERIRWGTAFKLVVFMPMAISMLAAGIIFRLVYDQDPDKGVANAVWVGVHDTFAESSAFPKAHPGRESPLEPAGGGAFITKQPVGLGEPVALPLVGVAPDQMPDSAERAAPAEPEDGRVTGTTWQDFTRGKGSGTPGGVDATELGYAGMRIEAVKDGKVVASAEAAGDGTFTLPAEADGALLRLPAANFEEPYNGLNWLGPSLVTPAVIGSYVWMWAGFAMVLIAAGLAGVPRELLEAARVDGANEWQVFRRVTVPLLAPVLAVVVVTLMINVLKVFDLVFIIAPGSSQDDANVLALELYRKGFASDQPGIASAIAVFLLLLVIPVMWFNVRRLRREVRR
>NZ_CP036534.1|WP_166624184.1|2984445_2985363_+|carbohydrate-ABC-transporter-permease
MTADGVAPATTAPPERESSPRAMQSLGSRLAEAASGGLVRVFLLVVGLFWLVPTIGLLLSSLRTPQDVAASGWWEVFTKPSQLTFRSYEELLKNGDITSSLLNTVAITVPATVLVVVIGALAGYAFAWMDFPGRDWWFLAVVGLLVVPVQVALIPIAELFGKIGLFGSVLGVILFHVGFGLPFAVFLLRNFFAEIPRELLEAARLDGAGELRLFARVVMPLGGPAIASLGIFQFLWVWNDMLVALIFSDSGSQPITVALQTQMRQFGNNIDVLAPGAFISMVIPLAVFFAFQRQFVSGVMAGAVK
>NZ_CP036534.1|WP_166624185.1|2985534_2987913_+|bifunctional-glycosyltransferase-family-2-protein/CDP-glycerol:glycerophosphate-glycerophosphotransferase
MPRFSVIVPAYQVQAYLHACLESVLSQSYPDLELIVVDDRSPDACGAIADEFAALDPRVRAVHLSRNRGLGPARNAGLERARGDYLVFLDGDDTLAPHALRAVADRLKETGEPDVLVYDYARSYRTGETVRNRAAAHLTEQGPAPFRLADRPGLLNLLMVAWNKAVRREFAERAGLAFPPGYYEDTPWTYPVLLSAQSVATLDRVCVHYRQRRTGSILGTPSERHLDVFAQYDRVFAFLDAHPEHARWRPVLYRRMADHLATVFTRPDRLPRPLRAEFLRRARAHCRRYRVPGAPAPLAVRLRHVLLRLGLRRTWAALRLASALRRRSARGAAVPLRAVHRAALRLHYRVQRLLPLRPDRAVFAVAGGRGYGCNPGALEEAFRRLAPHVRTAWAAERVHHHTVPPATRRLTPGTAAYWTALARSTYLVHNSAFDAGLVRRRGQVLVQTQAGTPLGRMGLDLVERPAAAAGADLGRLLRETGRWDYVVCANRHSALTWERVHPGGWTALEYGQPRTDVFQRARPEDVARLRETLGIPRGTVAVLYAPVHRDYRRTQRAVLDLERLVRRLGPRFTVLALGLPGGAPPSVRGDRLDAAGDPLLGAGGRPAADADPLPGAGVRVTPAGGRVVDVGGHPHVESLCLASDVLVTDYSPLMFDYAGLDRPIVLHAAEPEAYEEARGTYVDLGSFPPGPVARDEDELIGVFAGGDWQGAPSARLRAAFRERFCPYDDGRAAERVVRRVVLGQTQLPPVVPLDARRPPAPAVARSPLTTVPRSGAPVPSATASDRCPSTGS
>NZ_CP036534.1|WP_037768573.1|2988042_2990250_+|glycosyltransferase
MPRFSVIVPSHGVAGRLSRALDSILAQSFGDFELIPVCDAPESTAADVARERAGRDPRVSPVYSPPSAGLAGARNAGMAAATGAYLLFLDGDDVLVPGALTALDARLTDTGGVDVLYFEYERMPWWEGEATNPAAPLLAKTPKGAFTPDRAPGLTGVQLPAWSAVHRRAFLAERDLVFPDGHFTDVGFGARVAARAERIAVLRSVVVRHMARRQGNRLNLPGAHHAELLDQTELALADAAGLGLPAERRGPLFEQLFAAVLKTATDPRRLTRGQRRAFFRRASRLYRQYRPAGFRPPGGRVGVQYRLLASGSYAGFRTLRAANRAAGGAVARVPRPRGLRTRLQYRRELRRPLDPNLVVYCAYWGRGYACNPAAVHAKARELAPHLKSVFLVERDQAHTVPGDVDHAVIGSRRYWEVLARATYLVNNANFAEGVVKRPGSVHLQTQHGTPLKTMGVDQSTYPVVAAASGSFTKLLGRVDRWDYNLSSNRHSTRAWERAYPGGYEHLEYGYPRNDVYHTATAEDVARVRRELGVPEGKTAVLYAPTHRDYESGFGAGALDLEAFCEAAGEDVVVLLRAHYFYDRGGKRERTGRIIDVTAHRSSEDVCLAADALITDYSSIMFDYANLDRPIVVYADDWDVYRETRGVYFDLMAAPPGPVARTPEELTRVFAEGTYADAESTALRAAFRERFCEFDDGRAAERVVRRVLLGEPPESLPPVVPLAERVPAPAATLVRS
>NZ_CP036534.1|WP_031043469.1|2990256_2992482_+|bifunctional-glycosyltransferase-family-2-protein/CDP-glycerol:glycerophosphate-glycerophosphotransferase
MPRFSIILPCFKVQGFLGECLDSVLGQSFRDIEVIAVDDCSPDGSGAILDEYAARDDRVRVLHLEENAGLGRARNAGMPHATGDYLFFLDSDDTLTPGALAAMADRLAEAEDPDVLVFDYARTYWWGGTRRNALARVLAEAGDGTFTSAEYPEILDLLMVVWNKVYRRDFVEREGFTFPPGYYEDTPWTFPVMFSAERVATLARICLNYRQRRQGNILSTTSRKHFDVHAQYERVFAFLDSHPDLARWRPFLHAKMGEHCLDILSKPDRLPPSDKEEFFRRTAEMFRAYRPEGAETPAELRVLEHGYGAYRLRRRSGQASREVQRRGKQVRGAAGTRLRRVRTAVNTRRPLDPDLAVYSAFSHRGVLGDPAAIYRKAAEIAPGLRGVWVVRDEETAALLPPGTEHVLLNSPEYRRVTERATYFVNNVNWPGAVAKREGSVHIHTHQGTPLKYMGADLLDRRGARQNLDVPGMLRRADRWDHSLVAGRYAERVWERAYPCHFASARTGSPRNDVLVNAGPDDGRPVRARLGIPEGDTVVLYAPTRRDYRRDGLVERIDLARLAAGLGEGHTLVVRMHPSLAGGPVRGLGLSELHRRGVVVDATEEPDVADLMLASDVLVTDYSALMFDYVLLDRPVVLHADDWDTYTASRGAYFDVTREAPGHVTRTQGELASLLASGTHRDEESARLRAAFRERFCEYEDGRAAERVVRTLMLGEPMPEPEPSGVPGARAVTTGQDLLSAT

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Crispr_ID: NZ_CP036534_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_9

5088993-5089069

Orphan

Consensus_repeat	Method
GCCGACGAGAAGGCGGACGAGAAGGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036534_9

>merge|NZ_CP036534|9|5088993-5089069|CRISPRCasFinder
GCCGACGACACGGCCGCCGAGGTCGCGGCGGAGGCCGAGGTCGCGGTGGACGCCGTGGAGGCGGACGCCGGGGACGC

>NZ_CP036534|9|9|5088993-5089069|CRISPRCasFinder
GCCGACGACACGGCCGCCGAGGTCGCGG	CGGAGGCCGAGGTCGCGGTG
GACGCCGTGGAGGCGGACGCCGGGGACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_037760426.1\|5094569_5095058_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624799.1\|5081829_5083440_-\|D-aminoacylase	unknown	unknown	gnl\|CDD\|238622
NZ_CP036534.1\|WP_031033541.1\|5086736_5087147_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100004
NZ_CP036534.1\|WP_037760428.1\|5093502_5094354_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP036534.1\|WP_031033512.1\|5098551_5099259_+\|Flp-pilus-assembly-protein-CpaB	unknown	unknown	gnl\|CDD\|274472
NZ_CP036534.1\|WP_051159433.1\|5097606_5098479_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624801.1\|5092287_5093151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031033549.1\|5083463_5084753_-\|amino-acid-deaminase	unknown	unknown	gnl\|CDD\|143492
NZ_CP036534.1\|WP_037760435.1\|5089665_5090988_+\|iron-transporter	unknown	unknown	gnl\|CDD\|334596
NZ_CP036534.1\|WP_031033544.1\|5085975_5086740_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP036534.1\|WP_037760430.1\|5093296_5093491_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624800.1\|5084902_5085979_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP036534.1\|WP_166626060.1\|5095242_5096124_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_078535652.1\|5096182_5097238_-\|chitinase	unknown	unknown	gnl\|CDD\|119350
NZ_CP036534.1\|WP_031033562.1\|5076837_5077542_-\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|367292
NZ_CP036534.1\|WP_166624798.1\|5080534_5081746_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181738
NZ_CP036534.1\|WP_166624797.1\|5079967_5080390_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624796.1\|5077853_5079695_+\|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl\|CDD\|235256
NZ_CP036534.1\|WP_166623384.1\|5090989_5092174_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP036534.1\|WP_031033539.1\|5087273_5088752_+\|permease	unknown	unknown	gnl\|CDD\|308194

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_166624799.1\|5081829_5083440_-\|D-aminoacylase	gnl\|CDD\|238622	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.	2.62227e-113
NZ_CP036534.1\|WP_031033541.1\|5086736_5087147_+\|RidA-family-protein	gnl\|CDD\|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	6.28999e-35
NZ_CP036534.1\|WP_037760428.1\|5093502_5094354_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.54875e-08
NZ_CP036534.1\|WP_031033512.1\|5098551_5099259_+\|Flp-pilus-assembly-protein-CpaB	gnl\|CDD\|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	4.22021e-22
NZ_CP036534.1\|WP_031033549.1\|5083463_5084753_-\|amino-acid-deaminase	gnl\|CDD\|143492	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase. This subfamily is composed of Burkholderia cepacia cryptic D-serine dehydratase (cryptic DSD), which is also called D-serine deaminase, and similar bacterial proteins. Members of this subfamily are fold type III PLP-dependent enzymes with similarity to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. AR exists as dimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on similarity, it is possible cryptic DSDs may also form dimers. Cryptic DSDs are distinct from the ubiquitous bacterial DSDs coded by the dsdA gene, mammalian L-serine dehydratases (LSD) and mammalian serine racemase (SerRac), which are fold type II PLP-dependent enzymes. At present, the enzymatic and biochemical properties of cryptic DSDs are still poorly understood. Typically, DSDs catalyze the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia.	1.17694e-159
NZ_CP036534.1\|WP_037760435.1\|5089665_5090988_+\|iron-transporter	gnl\|CDD\|334596	pfam01566, Nramp, Natural resistance-associated macrophage protein. The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.	1.80404e-25
NZ_CP036534.1\|WP_031033544.1\|5085975_5086740_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.81378e-70
NZ_CP036534.1\|WP_166624800.1\|5084902_5085979_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	1.96521e-86
NZ_CP036534.1\|WP_166624798.1\|5080534_5081746_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181738	PRK09265, PRK09265, aminotransferase AlaT; Validated.	0
NZ_CP036534.1\|WP_031033562.1\|5076837_5077542_-\|hemolysin-III-family-protein	gnl\|CDD\|367292	pfam03006, HlyIII, Haemolysin-III related. Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. This family belongs to the CREST superfamily, which are distantly related to GPCRs.	1.70811e-50
NZ_CP036534.1\|WP_166623384.1\|5090989_5092174_-\|hypothetical-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	0.00340254
NZ_CP036534.1\|WP_078535652.1\|5096182_5097238_-\|chitinase	gnl\|CDD\|119350	cd02871, GH18_chitinase_D-like, GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.	1.5543e-118
NZ_CP036534.1\|WP_166624796.1\|5077853_5079695_+\|phosphoenolpyruvate-carboxykinase-(GTP)	gnl\|CDD\|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NZ_CP036534.1\|WP_031033539.1\|5087273_5088752_+\|permease	gnl\|CDD\|308194	pfam02447, GntP_permease, GntP family permease. This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter, and GntT, a high affinity transporter.	4.68321e-126

>NZ_CP036534.1|WP_031033539.1|5087273_5088752_+|permease
MSPMSLQLAADEAPPHTGGLLTLIDGTAGLLTVAAIGIVLLLFLIIKVRLQPFVALLSVSIAVGLLAGLSVTELFGTVQKSDAVSTIESGMGGILGHVAIIIGLGTMLGAILEVSGGAEVLASRLLGLFGEKRAPLAMGLTGLIFGIPVFFDVGIFVLAPIVYAAAKRSGKSVLLYCLPLLAGLSMTHAFLPPHPGPVAAAGLLHVDLGWIILMGIVCGIPAVLAAWVFAAWIGRRIFVAVPQDMVEAAEEAKQSVIDEQRSAGVTPRENPVALGTVLGIIGTPLVLILAATFSSIALDPSTLRSVIEFFGNPFVALTIALFLAYYLLGIRRGWSRKSLETVSTASLKPVGNILLVVGAGGVFGAVLSASGVAQALSDTFNDVGLPVIVLSYLLSLVLRVAQGSATVAIVTTAGIVAPLLAEGDHSQAFVALVIMAISAGSIFASHVNDGGFWMVAKYFGISERDTLKTWTVLESVLSVAGFVVAAVVSLFV
>NZ_CP036534.1|WP_031033541.1|5086736_5087147_+|RidA-family-protein
MTDKIALTPATHTVPPAKFSHGVKKGNLLQVAGQVGFLPHEEGKAPTPAGPTLREQTLQTLANVKAILEEGGASWDDVLMIRVYLTDVDHFAEMNDIYNAYFGEQGLTQPPAARTTVYVGLPAGLLIEIDALAALG
>NZ_CP036534.1|WP_031033544.1|5085975_5086740_+|IclR-family-transcriptional-regulator
MSQTVDRALSILPLLAEGPADLGRVADRLGVHKSTALRLLRTLHEHGFVYRQADQRYRLGARLISLAQEAMENLDVREIAHPHLVRLNEQVGHTVHLAVHEEDEVLYIDKVDSRYPVRMYSRIGKPVAITVAAVAKLLLADLPENELRAVAEKLDYPLYTARSTPNAEGFLKELAKVREQGWATDLGGHEESINCVAAPIRGADGRVVAAMSVSAPNVVVTADELLTLLPLVRRTADAISGEYSGRTPVKEVTA
>NZ_CP036534.1|WP_166624800.1|5084902_5085979_+|sugar-kinase
MTVDGPRSTAPDVADVVALGESMVTFLPSRPGRLADVPSFERAIGGAESNVACVLAAAGHSVRWVGRVGADGFGDHLVEAIGAYGVDVSAVRRDPGRPTGVYFRTAGDRATDAHEVAYYRAGSAASAMSVDTMDLDAIRSGRVLHLSGITPALSAECLGLMRELTARRPGRPLVSFDVNHRPGLWRDAEDGPRILRELARGADLVFVGEDEAWDLGGPEAVRAALPEPDVLVVKQGATGATAFHGSERTTVPALAVDVVAAVGAGDAFAAGFLSATLRGLPVRDRLRHGHLMAAAALTVPGDLAAPPARDHADRLAALDDTAWGRLRLGPGWTQAGDAADGTAGDETGAGADEEVRTP
>NZ_CP036534.1|WP_031033549.1|5083463_5084753_-|amino-acid-deaminase
MARDSGTEALAELAQERVDHRFKGLPPDAAGLTVAELTAQRRNLFTGGFATPVLALSAERLEHNLALMETYAARHGLAFAPHGKTSMAPQLFHRQIEHGAWGITLAVPHQVWVARAFGIGRIFLANELVDAAALRRLAAELDADPDFRFVCYVDSVRGVELMDAALTEAGAGRPVDVVVELGAGAGARTGARTEADCAAVADAVAAARTLRLAGVAGYEGEVPDADPERVRAWLRRLVALAVDFDRAGRFTGLAEVVLSAGGSAWFDAVADVFAEVPDLSLPVLKLLRSGAYVSHDDGHYREVTPFNRVPAEGALEPAFRLWTQVVSRPTAEQAFANAGKRDAAYDLDLPFAQVVRPSDGGPERPATGVAVSGLSDQHAWLRTAPEAELEVGDWVGLGLSHPCTSFDKWQLIPVAEADGTVVDYIRTFF
>NZ_CP036534.1|WP_166624799.1|5081829_5083440_-|D-aminoacylase
MEELVIRDADVVDGSGADSYRADVVVDGGRIVSIVKEAAAAGCQRPKARRELDAEGLVLAPGFIDMHAHSDLALLRDPDHSAKAAQGVTLEVVGQDGLSYAPVDDRTLGEVRRAIAGWNGPGDDVDFDWRSVGEYLDRLDRGIAVNAAYLIPQGTVRALAVGWDDREATPAELERMRRLVAEGMEQGAVGMSSGLTYTPGMYAKDAELTELCRVVAEYGGYYCPHHRSYGAGALEAYEEMVELTREAGCPLHLAHATMNFGVNRGRAPELLTLLDEALDGGADITLDTYPYTPGCTTLAALLPSWASEGGPEQILKRLADDDTAERIRHHMEELGSDGSHGVPMEWETIEISGTGDPALGEYVGRTVQESARLRGESPWTVVRQLLLADRLAPTILQHVGHEENVRAIMRHRVHTGGSDGILQGAKPHPRAYGTFPHYLGHYVRELGVLPLEECVAHLTSRPAARLRLPDRGLVREGYRADLVLFDRATVAAGSTYEEPRRLPTGIPYVLVDGRFVMEEGRRTDVLAGRSVRRGSR
>NZ_CP036534.1|WP_166624798.1|5080534_5081746_-|pyridoxal-phosphate-dependent-aminotransferase
MQVIQSTKLANVCYEIRGPVLEEAMRLEAAGHRILKLNTGNPAAFGFDCPPEILEDILRNVSTAHGYGDAKGLLAARRAVVMHNQTLGIETDVEHVFIGNGVSELIVMAMQGLLDDGDEVLVPAPDYPLWTAAVSLSGGTAVHYRCDEQSDWMPDLADVERKITDRTKALVIINPNNPTGAVYDDAMLRGLTDIARRHNLLVCSDEIYDKILYDDATHTPTAAITPDLLTLTFNGMSKAYRVAGYRVGWMSISGPRAHAESYIEGLTILANMRLCANMPGQHGVVAALSGRQTINELVLPGGRLLEQRDAAHEALTRIPGVTCVKPKGALYLFPRLDPKVFKIKDDRRMVLDLLRQEKIMVVQGTGFNWPEPDHFRVVTLPTAGDLREAVDRIGNFLDGYSQP
>NZ_CP036534.1|WP_166624797.1|5079967_5080390_-|hypothetical-protein
MYEPIRTKSVHSTTAASSTDFPHRSREEELDIQLAGHLAALLALTDELRALEPTTDLDTAAERLAAQVARLRGGRAPVRLTVAAAHPEPRPAALHRKAHTLAGRALVVAASRADTAAAILAAERMDAHSAALEPRELASR
>NZ_CP036534.1|WP_166624796.1|5077853_5079695_+|phosphoenolpyruvate-carboxykinase-(GTP)
MARDIAAPPVPTTHQELISWVNEIAELTQPDAVVWCDGSEAEYERLCGELVEQGTFRKLDPIKRPNSYYAASDPSDVARVEDRTFICSAKEEDAGPTNHWKDPAEMREIFTGEKGEGGLFRGAMRGRTMYVVPFCMGPLGSPLSALGVEITDSAYVAASMRTMTRMGQPVLDELGEDGFFVKAVHSVGAPLEPGQADVPWPCSGTKYISHFPEDREIWSYGSGYGGNALLGKKCYALRIASVMARDEGWLAEHMLVLKLTPPRGEAKYVAAAFPSACGKTNLAMLEPTISGWTVETIGDDIAWMRFGEDGRLYAINPEAGFFGVAPGTGEHTNANAMKTLWGNSVFTNVALTDDGDVWWEGMTEETPAHLTDWKGNDWTPESGTPAAHPNARFTTPAAQCPIIAPEWEDPRGVPISAILFGGRRATAVPLVTESFDWDHGVFLGANVASEKTAAAEGKVGELRRDPFAMLPFCGYNMGDYMGHWVDVGKSASQRGDQAKLPKIYYVNWFRKDDAGRFVWPGFGENGRVLKWIVERLEGTADGVETPIGVLPTKESLDTDGLDLADADLEFLLSVDKDVWREEAALVPEHLNTFGDHTPTELWDQYRALVRRLG
>NZ_CP036534.1|WP_031033562.1|5076837_5077542_-|hemolysin-III-family-protein
MTASVPDAPREKPAAGRGPTALSLPHPVKPKLRGWLHLGMFPAVLVAGLVLTALAQSTEARIACGVYVLTACLLFGVSALYHRGDWSPRMDGVLRRLDHANIFLIIAGTYTPLTMLLLPGAKGQWLLWGIWAAAAAGIVFRVFWVGAPRWLYTPCYLAMGWAAVFYLPEFMRAGGIAVLVLVIVGGLLYSAGGVIYGLKRPNPSPRWFGFHEVFHSFTLAAFIAHYVGISLIAY
>NZ_CP036534.1|WP_037760435.1|5089665_5090988_+|iron-transporter
MADTTGNITGAGAPVGAGPAPRKSSWRYIGPGIVVAATGVGAGDLVATLIAGSNFGYTLLWAAVIGCLVKISLAEACGRWHLATGRTLFDGWASLGRWTTWFFAIYAVIWGFVYGAAAMSSSALPLQALFPDVMGLEWWGIASGLVGLVFVWFNKYNVFEKVMTVLVGVMFVVTVYLAIRVTPNLGDAFAGLLPVLPDEKDSVLNTLGLIGGVGGTITLAAYGYWVNAKGWTHTGWMKVMRLDNRVAYATTGIFVIAMLFVGAELLHSANIAIASGDKGLIQLGDVLEQQYGTATGKLFLIGFFATSFTSLIGVWHGVSLMFADFLARQRGEREARADELASGRREKSWSFRAYLLWLTFPPMILLFQGEPFRLIIIYGVLGAAFMPFLALTLMWLLNSSRTPREWRNGGLSNGMLAIAGLLFLVLCVKQIWDQPWAEFF
>NZ_CP036534.1|WP_166623384.1|5090989_5092174_-|hypothetical-protein
MPVFDHRQGPSERSGRASSRQSAATTRSASPSAKLLSAQNAAGNQAVVQMLRQAGHSFAQHPQGAGAGAKTEANALPVQRVAKESVRQPTGRHRSAEVPDLSRALAEAIGNAGSSAERYNVLQQLLAYILGRFTQLGAGLGENQADILRNLTQRVVVTYSDEPVGAMAHTEEQLGQEPDDPNVDSPPIVITVYAAAFEGGPAQLYSTMRHELIHAAQRSMVPDEGQAAATDDVMFEDLYEETTGAPTAQTLQLPMQEIETHVWELTHARETGVDAGYRNDTVTYLVQYAHELAAGVGSATNEEFAYWANYLVRAVRLLNEALTVVTDAAGRRSIQAAAAALQNAINNRLGSGGSKRSGGSSKRSGGSGGGSKRSGGGSGSGSGSKRRRSRRTAA
>NZ_CP036534.1|WP_166624801.1|5092287_5093151_-|hypothetical-protein
MPVQTAQRAVSRSTSPAGSGAATPASREMLALQGLAGNAGTTRLLAQRRSGTPHPVQRAVGRGGGAANRVVQRMPWPDPAAAHRRMLEQGWQATEDGGYTRAPQPETGDSAGGQQAGAAPQTQGREQEQEQAADEPITLRVLVRKNASFRDEDYLNNVGHSWVAFYKGDKFQSSAGFYPIGGQINEDAPHRSVPGEVRMNHDDPSNATTELSVPLDQKQFSKAQKYIQTNLNHEYNVIRFNCTDFVIGVHKAATGHSPPGRNLLLPNNPNDLHSGIKKKNNKDLQGK
>NZ_CP036534.1|WP_037760430.1|5093296_5093491_-|hypothetical-protein
MSSDITWEAPFCGEGNSCFRLGTDATGNAYIAIAGEEETPLTDSRDALRRMIIDIKAGKADHLL
>NZ_CP036534.1|WP_037760428.1|5093502_5094354_-|helix-turn-helix-domain-containing-protein
MGARTSATARQKRLGIEVRRMRTSAGMSAESAAGLLGVDRGTISHIESGVRAVSPERVRTLACNCDCADADYVEALVDMAAAGRRGWWEKYRGSLPQGMLDIAELEAHSARMRAAYSMHVPGLLQTSDHAMAVFRVVVPQLPEHEVALRMAHRVERQSVLDGDDARPFVAIVHEAALRMQFGGREVAKAQLGYVLERAGQDNVTVLVIPFAAGAFPGAGQTVLYAEGPVPQLDTVQVDSSHGPDFLHAETQLAKYRAHLDWMERIALSSKASRDFIRAIANEL
>NZ_CP036534.1|WP_037760426.1|5094569_5095058_+|hypothetical-protein
MPATRCPSASIHPADPAPPVPETLAYSFTLPAALASAALARAATREVLRAHGLVDMLDPALQTVGELTAVACQFTESANYYLTLRYRSATLRVIAYDSHPRHTSPHLATACDTRRRAALRVLACVCRACDGAWGFGEAREPGGGTRMWATLPRLSAAAYGAP
>NZ_CP036534.1|WP_166626060.1|5095242_5096124_+|hypothetical-protein
MARTVSLGPSVGCCVLAVSLVVRARWASGRVRTRLLLLGGSAVAGGAYRLLADMLTAHASDPGQDERPLLGPVVAIGATLAVGLGTAGLVVAADAGTGRPVLLRRVLDGFVAAGALFMAGWVLLSGTGGGWRLGEGMVGFLWAAELVFLSFLLALCRLVRSDRRATLWAGIVGLSLMLFGDTLQLWAVGPHQPGSLGCQLVDGCKTAGLLVITAGPWLPGGASVLDIARPALRWGMEGAAAFVPLTVCTVMALGYVLSPAAHDPVPLLVGGAVLVSLWARQRFLPSETMRRGD
>NZ_CP036534.1|WP_078535652.1|5096182_5097238_-|chitinase
MDPVSRRRTRRLGTWTAAVTGTLALAFTAVGPTSAANADTAAGTPATSTAVTKAAADVPKHAVTGYWQNFDNGATVQKLSDVPAEYDIVAVAFADATTTPGAVEFNLDSAGLGGYTVDQFKADVAAKQADGKKVIISVGGEKGTVGVSDSASAANFADSVWSVMQEYGFDGVDIDLENGLNPTYMTEALRALSSKAGPDMVLTMAPQTIDMQSTSGSYFETALNVKDILTVVNMQYYNSGTMLGCDGQVYAQGSVDFLTALACIQLEGGLAPSQVGLGVPASSSAAGSGYADPSVVNDALDCLTQGTNCGSFKPSKTYPDLRGAMAWSTNWDATAGNGWSSAVGPHVHALP
>NZ_CP036534.1|WP_051159433.1|5097606_5098479_+|hypothetical-protein
MALPPQDERTLPAVVLRDVDQRPLEQVLAELQSLVDQHGHVVVVCSQAVPPGVERRLRTVRALLETDRVALFQPPLPPLGLAVLVRQLRQLASCDLSPGILASAGRLLTHYIHAGAVLGSVTHLDRVPVDLKAHARSWVPGSQFGVVAHPAPQLVRIGPEASLTGPEFGTWLLVAKGQQAADWVTGTLAPSWQVQGLREMALPAESPHWWGTGRLTEFCAYLPDLSVLYQLVTSVRQSTCHWCGMDVIGDRCVFCSATPPVYDDGAAGRALGHRRDPALGRRGERRALTG
>NZ_CP036534.1|WP_031033512.1|5098551_5099259_+|Flp-pilus-assembly-protein-CpaB
MNSRQRRGIILLILSVLCALGAFAGVLSVIDDVQSKVGPEVTAYRLKSDIEPYTELGAAQFEKIEMPERWLSDNAVTDLGQVRGKIAVTKLKAGSLLQSDMIVDTPALRPGEQEVAIMIDAATGVAGKITPGSAVNVYATFEGQREGDPDQSKIIVTNAKVIDVGELTSLEPDEDSRDREPTDAVPITFALSTLDAQRLTYAESFARRVRLALVAPGGDSTVPDADRTYELAKDK

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Crispr_ID: NZ_CP036534_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_10

5089437-5089557

Orphan

Consensus_repeat	Method
GCCGACGAGAAGGCGGACGAGAAGGCCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP036534_10

>merge|NZ_CP036534|10|5089437-5089557|CRISPRCasFinder
GACGACGCGGAGACGGACGCCGACGACGCGAAGGACGCCGACGAGAAGGCGGACGAGAAGGCCGACAAGGCGGACGGCAAGGCCGAAGAGGAGGCCGAAGAGAAGGCGGACGAGAAGGCCG

>NZ_CP036534|10|10|5089437-5089557|CRISPRCasFinder
GACGACGCGGAGACGGACGCCGACGACG	CGAAGGACGCCGACGAGAAG
GCGGACGAGAAGGCCGACAAGGCGGACG	GCAAGGCCGAAGAGGAG
GCCGAAGAGAAGGCGGACGAGAAGGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_037760426.1\|5094569_5095058_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624799.1\|5081829_5083440_-\|D-aminoacylase	unknown	unknown	gnl\|CDD\|238622
NZ_CP036534.1\|WP_031033541.1\|5086736_5087147_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100004
NZ_CP036534.1\|WP_037760428.1\|5093502_5094354_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP036534.1\|WP_031033512.1\|5098551_5099259_+\|Flp-pilus-assembly-protein-CpaB	unknown	unknown	gnl\|CDD\|274472
NZ_CP036534.1\|WP_051159433.1\|5097606_5098479_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624801.1\|5092287_5093151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_031033549.1\|5083463_5084753_-\|amino-acid-deaminase	unknown	unknown	gnl\|CDD\|143492
NZ_CP036534.1\|WP_037760435.1\|5089665_5090988_+\|iron-transporter	unknown	unknown	gnl\|CDD\|334596
NZ_CP036534.1\|WP_031033544.1\|5085975_5086740_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP036534.1\|WP_037760430.1\|5093296_5093491_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624800.1\|5084902_5085979_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP036534.1\|WP_166626060.1\|5095242_5096124_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_078535652.1\|5096182_5097238_-\|chitinase	unknown	unknown	gnl\|CDD\|119350
NZ_CP036534.1\|WP_031033562.1\|5076837_5077542_-\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|367292
NZ_CP036534.1\|WP_166624798.1\|5080534_5081746_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181738
NZ_CP036534.1\|WP_166624797.1\|5079967_5080390_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166624796.1\|5077853_5079695_+\|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl\|CDD\|235256
NZ_CP036534.1\|WP_166623384.1\|5090989_5092174_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP036534.1\|WP_031033539.1\|5087273_5088752_+\|permease	unknown	unknown	gnl\|CDD\|308194

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_166624799.1\|5081829_5083440_-\|D-aminoacylase	gnl\|CDD\|238622	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.	2.62227e-113
NZ_CP036534.1\|WP_031033541.1\|5086736_5087147_+\|RidA-family-protein	gnl\|CDD\|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	6.28999e-35
NZ_CP036534.1\|WP_037760428.1\|5093502_5094354_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.54875e-08
NZ_CP036534.1\|WP_031033512.1\|5098551_5099259_+\|Flp-pilus-assembly-protein-CpaB	gnl\|CDD\|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	4.22021e-22
NZ_CP036534.1\|WP_031033549.1\|5083463_5084753_-\|amino-acid-deaminase	gnl\|CDD\|143492	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase. This subfamily is composed of Burkholderia cepacia cryptic D-serine dehydratase (cryptic DSD), which is also called D-serine deaminase, and similar bacterial proteins. Members of this subfamily are fold type III PLP-dependent enzymes with similarity to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. AR exists as dimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on similarity, it is possible cryptic DSDs may also form dimers. Cryptic DSDs are distinct from the ubiquitous bacterial DSDs coded by the dsdA gene, mammalian L-serine dehydratases (LSD) and mammalian serine racemase (SerRac), which are fold type II PLP-dependent enzymes. At present, the enzymatic and biochemical properties of cryptic DSDs are still poorly understood. Typically, DSDs catalyze the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia.	1.17694e-159
NZ_CP036534.1\|WP_037760435.1\|5089665_5090988_+\|iron-transporter	gnl\|CDD\|334596	pfam01566, Nramp, Natural resistance-associated macrophage protein. The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.	1.80404e-25
NZ_CP036534.1\|WP_031033544.1\|5085975_5086740_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.81378e-70
NZ_CP036534.1\|WP_166624800.1\|5084902_5085979_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	1.96521e-86
NZ_CP036534.1\|WP_166624798.1\|5080534_5081746_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181738	PRK09265, PRK09265, aminotransferase AlaT; Validated.	0
NZ_CP036534.1\|WP_031033562.1\|5076837_5077542_-\|hemolysin-III-family-protein	gnl\|CDD\|367292	pfam03006, HlyIII, Haemolysin-III related. Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. This family belongs to the CREST superfamily, which are distantly related to GPCRs.	1.70811e-50
NZ_CP036534.1\|WP_166623384.1\|5090989_5092174_-\|hypothetical-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	0.00340254
NZ_CP036534.1\|WP_078535652.1\|5096182_5097238_-\|chitinase	gnl\|CDD\|119350	cd02871, GH18_chitinase_D-like, GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.	1.5543e-118
NZ_CP036534.1\|WP_166624796.1\|5077853_5079695_+\|phosphoenolpyruvate-carboxykinase-(GTP)	gnl\|CDD\|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NZ_CP036534.1\|WP_031033539.1\|5087273_5088752_+\|permease	gnl\|CDD\|308194	pfam02447, GntP_permease, GntP family permease. This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter, and GntT, a high affinity transporter.	4.68321e-126

>NZ_CP036534.1|WP_031033539.1|5087273_5088752_+|permease
MSPMSLQLAADEAPPHTGGLLTLIDGTAGLLTVAAIGIVLLLFLIIKVRLQPFVALLSVSIAVGLLAGLSVTELFGTVQKSDAVSTIESGMGGILGHVAIIIGLGTMLGAILEVSGGAEVLASRLLGLFGEKRAPLAMGLTGLIFGIPVFFDVGIFVLAPIVYAAAKRSGKSVLLYCLPLLAGLSMTHAFLPPHPGPVAAAGLLHVDLGWIILMGIVCGIPAVLAAWVFAAWIGRRIFVAVPQDMVEAAEEAKQSVIDEQRSAGVTPRENPVALGTVLGIIGTPLVLILAATFSSIALDPSTLRSVIEFFGNPFVALTIALFLAYYLLGIRRGWSRKSLETVSTASLKPVGNILLVVGAGGVFGAVLSASGVAQALSDTFNDVGLPVIVLSYLLSLVLRVAQGSATVAIVTTAGIVAPLLAEGDHSQAFVALVIMAISAGSIFASHVNDGGFWMVAKYFGISERDTLKTWTVLESVLSVAGFVVAAVVSLFV
>NZ_CP036534.1|WP_031033541.1|5086736_5087147_+|RidA-family-protein
MTDKIALTPATHTVPPAKFSHGVKKGNLLQVAGQVGFLPHEEGKAPTPAGPTLREQTLQTLANVKAILEEGGASWDDVLMIRVYLTDVDHFAEMNDIYNAYFGEQGLTQPPAARTTVYVGLPAGLLIEIDALAALG
>NZ_CP036534.1|WP_031033544.1|5085975_5086740_+|IclR-family-transcriptional-regulator
MSQTVDRALSILPLLAEGPADLGRVADRLGVHKSTALRLLRTLHEHGFVYRQADQRYRLGARLISLAQEAMENLDVREIAHPHLVRLNEQVGHTVHLAVHEEDEVLYIDKVDSRYPVRMYSRIGKPVAITVAAVAKLLLADLPENELRAVAEKLDYPLYTARSTPNAEGFLKELAKVREQGWATDLGGHEESINCVAAPIRGADGRVVAAMSVSAPNVVVTADELLTLLPLVRRTADAISGEYSGRTPVKEVTA
>NZ_CP036534.1|WP_166624800.1|5084902_5085979_+|sugar-kinase
MTVDGPRSTAPDVADVVALGESMVTFLPSRPGRLADVPSFERAIGGAESNVACVLAAAGHSVRWVGRVGADGFGDHLVEAIGAYGVDVSAVRRDPGRPTGVYFRTAGDRATDAHEVAYYRAGSAASAMSVDTMDLDAIRSGRVLHLSGITPALSAECLGLMRELTARRPGRPLVSFDVNHRPGLWRDAEDGPRILRELARGADLVFVGEDEAWDLGGPEAVRAALPEPDVLVVKQGATGATAFHGSERTTVPALAVDVVAAVGAGDAFAAGFLSATLRGLPVRDRLRHGHLMAAAALTVPGDLAAPPARDHADRLAALDDTAWGRLRLGPGWTQAGDAADGTAGDETGAGADEEVRTP
>NZ_CP036534.1|WP_031033549.1|5083463_5084753_-|amino-acid-deaminase
MARDSGTEALAELAQERVDHRFKGLPPDAAGLTVAELTAQRRNLFTGGFATPVLALSAERLEHNLALMETYAARHGLAFAPHGKTSMAPQLFHRQIEHGAWGITLAVPHQVWVARAFGIGRIFLANELVDAAALRRLAAELDADPDFRFVCYVDSVRGVELMDAALTEAGAGRPVDVVVELGAGAGARTGARTEADCAAVADAVAAARTLRLAGVAGYEGEVPDADPERVRAWLRRLVALAVDFDRAGRFTGLAEVVLSAGGSAWFDAVADVFAEVPDLSLPVLKLLRSGAYVSHDDGHYREVTPFNRVPAEGALEPAFRLWTQVVSRPTAEQAFANAGKRDAAYDLDLPFAQVVRPSDGGPERPATGVAVSGLSDQHAWLRTAPEAELEVGDWVGLGLSHPCTSFDKWQLIPVAEADGTVVDYIRTFF
>NZ_CP036534.1|WP_166624799.1|5081829_5083440_-|D-aminoacylase
MEELVIRDADVVDGSGADSYRADVVVDGGRIVSIVKEAAAAGCQRPKARRELDAEGLVLAPGFIDMHAHSDLALLRDPDHSAKAAQGVTLEVVGQDGLSYAPVDDRTLGEVRRAIAGWNGPGDDVDFDWRSVGEYLDRLDRGIAVNAAYLIPQGTVRALAVGWDDREATPAELERMRRLVAEGMEQGAVGMSSGLTYTPGMYAKDAELTELCRVVAEYGGYYCPHHRSYGAGALEAYEEMVELTREAGCPLHLAHATMNFGVNRGRAPELLTLLDEALDGGADITLDTYPYTPGCTTLAALLPSWASEGGPEQILKRLADDDTAERIRHHMEELGSDGSHGVPMEWETIEISGTGDPALGEYVGRTVQESARLRGESPWTVVRQLLLADRLAPTILQHVGHEENVRAIMRHRVHTGGSDGILQGAKPHPRAYGTFPHYLGHYVRELGVLPLEECVAHLTSRPAARLRLPDRGLVREGYRADLVLFDRATVAAGSTYEEPRRLPTGIPYVLVDGRFVMEEGRRTDVLAGRSVRRGSR
>NZ_CP036534.1|WP_166624798.1|5080534_5081746_-|pyridoxal-phosphate-dependent-aminotransferase
MQVIQSTKLANVCYEIRGPVLEEAMRLEAAGHRILKLNTGNPAAFGFDCPPEILEDILRNVSTAHGYGDAKGLLAARRAVVMHNQTLGIETDVEHVFIGNGVSELIVMAMQGLLDDGDEVLVPAPDYPLWTAAVSLSGGTAVHYRCDEQSDWMPDLADVERKITDRTKALVIINPNNPTGAVYDDAMLRGLTDIARRHNLLVCSDEIYDKILYDDATHTPTAAITPDLLTLTFNGMSKAYRVAGYRVGWMSISGPRAHAESYIEGLTILANMRLCANMPGQHGVVAALSGRQTINELVLPGGRLLEQRDAAHEALTRIPGVTCVKPKGALYLFPRLDPKVFKIKDDRRMVLDLLRQEKIMVVQGTGFNWPEPDHFRVVTLPTAGDLREAVDRIGNFLDGYSQP
>NZ_CP036534.1|WP_166624797.1|5079967_5080390_-|hypothetical-protein
MYEPIRTKSVHSTTAASSTDFPHRSREEELDIQLAGHLAALLALTDELRALEPTTDLDTAAERLAAQVARLRGGRAPVRLTVAAAHPEPRPAALHRKAHTLAGRALVVAASRADTAAAILAAERMDAHSAALEPRELASR
>NZ_CP036534.1|WP_166624796.1|5077853_5079695_+|phosphoenolpyruvate-carboxykinase-(GTP)
MARDIAAPPVPTTHQELISWVNEIAELTQPDAVVWCDGSEAEYERLCGELVEQGTFRKLDPIKRPNSYYAASDPSDVARVEDRTFICSAKEEDAGPTNHWKDPAEMREIFTGEKGEGGLFRGAMRGRTMYVVPFCMGPLGSPLSALGVEITDSAYVAASMRTMTRMGQPVLDELGEDGFFVKAVHSVGAPLEPGQADVPWPCSGTKYISHFPEDREIWSYGSGYGGNALLGKKCYALRIASVMARDEGWLAEHMLVLKLTPPRGEAKYVAAAFPSACGKTNLAMLEPTISGWTVETIGDDIAWMRFGEDGRLYAINPEAGFFGVAPGTGEHTNANAMKTLWGNSVFTNVALTDDGDVWWEGMTEETPAHLTDWKGNDWTPESGTPAAHPNARFTTPAAQCPIIAPEWEDPRGVPISAILFGGRRATAVPLVTESFDWDHGVFLGANVASEKTAAAEGKVGELRRDPFAMLPFCGYNMGDYMGHWVDVGKSASQRGDQAKLPKIYYVNWFRKDDAGRFVWPGFGENGRVLKWIVERLEGTADGVETPIGVLPTKESLDTDGLDLADADLEFLLSVDKDVWREEAALVPEHLNTFGDHTPTELWDQYRALVRRLG
>NZ_CP036534.1|WP_031033562.1|5076837_5077542_-|hemolysin-III-family-protein
MTASVPDAPREKPAAGRGPTALSLPHPVKPKLRGWLHLGMFPAVLVAGLVLTALAQSTEARIACGVYVLTACLLFGVSALYHRGDWSPRMDGVLRRLDHANIFLIIAGTYTPLTMLLLPGAKGQWLLWGIWAAAAAGIVFRVFWVGAPRWLYTPCYLAMGWAAVFYLPEFMRAGGIAVLVLVIVGGLLYSAGGVIYGLKRPNPSPRWFGFHEVFHSFTLAAFIAHYVGISLIAY
>NZ_CP036534.1|WP_037760435.1|5089665_5090988_+|iron-transporter
MADTTGNITGAGAPVGAGPAPRKSSWRYIGPGIVVAATGVGAGDLVATLIAGSNFGYTLLWAAVIGCLVKISLAEACGRWHLATGRTLFDGWASLGRWTTWFFAIYAVIWGFVYGAAAMSSSALPLQALFPDVMGLEWWGIASGLVGLVFVWFNKYNVFEKVMTVLVGVMFVVTVYLAIRVTPNLGDAFAGLLPVLPDEKDSVLNTLGLIGGVGGTITLAAYGYWVNAKGWTHTGWMKVMRLDNRVAYATTGIFVIAMLFVGAELLHSANIAIASGDKGLIQLGDVLEQQYGTATGKLFLIGFFATSFTSLIGVWHGVSLMFADFLARQRGEREARADELASGRREKSWSFRAYLLWLTFPPMILLFQGEPFRLIIIYGVLGAAFMPFLALTLMWLLNSSRTPREWRNGGLSNGMLAIAGLLFLVLCVKQIWDQPWAEFF
>NZ_CP036534.1|WP_166623384.1|5090989_5092174_-|hypothetical-protein
MPVFDHRQGPSERSGRASSRQSAATTRSASPSAKLLSAQNAAGNQAVVQMLRQAGHSFAQHPQGAGAGAKTEANALPVQRVAKESVRQPTGRHRSAEVPDLSRALAEAIGNAGSSAERYNVLQQLLAYILGRFTQLGAGLGENQADILRNLTQRVVVTYSDEPVGAMAHTEEQLGQEPDDPNVDSPPIVITVYAAAFEGGPAQLYSTMRHELIHAAQRSMVPDEGQAAATDDVMFEDLYEETTGAPTAQTLQLPMQEIETHVWELTHARETGVDAGYRNDTVTYLVQYAHELAAGVGSATNEEFAYWANYLVRAVRLLNEALTVVTDAAGRRSIQAAAAALQNAINNRLGSGGSKRSGGSSKRSGGSGGGSKRSGGGSGSGSGSKRRRSRRTAA
>NZ_CP036534.1|WP_166624801.1|5092287_5093151_-|hypothetical-protein
MPVQTAQRAVSRSTSPAGSGAATPASREMLALQGLAGNAGTTRLLAQRRSGTPHPVQRAVGRGGGAANRVVQRMPWPDPAAAHRRMLEQGWQATEDGGYTRAPQPETGDSAGGQQAGAAPQTQGREQEQEQAADEPITLRVLVRKNASFRDEDYLNNVGHSWVAFYKGDKFQSSAGFYPIGGQINEDAPHRSVPGEVRMNHDDPSNATTELSVPLDQKQFSKAQKYIQTNLNHEYNVIRFNCTDFVIGVHKAATGHSPPGRNLLLPNNPNDLHSGIKKKNNKDLQGK
>NZ_CP036534.1|WP_037760430.1|5093296_5093491_-|hypothetical-protein
MSSDITWEAPFCGEGNSCFRLGTDATGNAYIAIAGEEETPLTDSRDALRRMIIDIKAGKADHLL
>NZ_CP036534.1|WP_037760428.1|5093502_5094354_-|helix-turn-helix-domain-containing-protein
MGARTSATARQKRLGIEVRRMRTSAGMSAESAAGLLGVDRGTISHIESGVRAVSPERVRTLACNCDCADADYVEALVDMAAAGRRGWWEKYRGSLPQGMLDIAELEAHSARMRAAYSMHVPGLLQTSDHAMAVFRVVVPQLPEHEVALRMAHRVERQSVLDGDDARPFVAIVHEAALRMQFGGREVAKAQLGYVLERAGQDNVTVLVIPFAAGAFPGAGQTVLYAEGPVPQLDTVQVDSSHGPDFLHAETQLAKYRAHLDWMERIALSSKASRDFIRAIANEL
>NZ_CP036534.1|WP_037760426.1|5094569_5095058_+|hypothetical-protein
MPATRCPSASIHPADPAPPVPETLAYSFTLPAALASAALARAATREVLRAHGLVDMLDPALQTVGELTAVACQFTESANYYLTLRYRSATLRVIAYDSHPRHTSPHLATACDTRRRAALRVLACVCRACDGAWGFGEAREPGGGTRMWATLPRLSAAAYGAP
>NZ_CP036534.1|WP_166626060.1|5095242_5096124_+|hypothetical-protein
MARTVSLGPSVGCCVLAVSLVVRARWASGRVRTRLLLLGGSAVAGGAYRLLADMLTAHASDPGQDERPLLGPVVAIGATLAVGLGTAGLVVAADAGTGRPVLLRRVLDGFVAAGALFMAGWVLLSGTGGGWRLGEGMVGFLWAAELVFLSFLLALCRLVRSDRRATLWAGIVGLSLMLFGDTLQLWAVGPHQPGSLGCQLVDGCKTAGLLVITAGPWLPGGASVLDIARPALRWGMEGAAAFVPLTVCTVMALGYVLSPAAHDPVPLLVGGAVLVSLWARQRFLPSETMRRGD
>NZ_CP036534.1|WP_078535652.1|5096182_5097238_-|chitinase
MDPVSRRRTRRLGTWTAAVTGTLALAFTAVGPTSAANADTAAGTPATSTAVTKAAADVPKHAVTGYWQNFDNGATVQKLSDVPAEYDIVAVAFADATTTPGAVEFNLDSAGLGGYTVDQFKADVAAKQADGKKVIISVGGEKGTVGVSDSASAANFADSVWSVMQEYGFDGVDIDLENGLNPTYMTEALRALSSKAGPDMVLTMAPQTIDMQSTSGSYFETALNVKDILTVVNMQYYNSGTMLGCDGQVYAQGSVDFLTALACIQLEGGLAPSQVGLGVPASSSAAGSGYADPSVVNDALDCLTQGTNCGSFKPSKTYPDLRGAMAWSTNWDATAGNGWSSAVGPHVHALP
>NZ_CP036534.1|WP_051159433.1|5097606_5098479_+|hypothetical-protein
MALPPQDERTLPAVVLRDVDQRPLEQVLAELQSLVDQHGHVVVVCSQAVPPGVERRLRTVRALLETDRVALFQPPLPPLGLAVLVRQLRQLASCDLSPGILASAGRLLTHYIHAGAVLGSVTHLDRVPVDLKAHARSWVPGSQFGVVAHPAPQLVRIGPEASLTGPEFGTWLLVAKGQQAADWVTGTLAPSWQVQGLREMALPAESPHWWGTGRLTEFCAYLPDLSVLYQLVTSVRQSTCHWCGMDVIGDRCVFCSATPPVYDDGAAGRALGHRRDPALGRRGERRALTG
>NZ_CP036534.1|WP_031033512.1|5098551_5099259_+|Flp-pilus-assembly-protein-CpaB
MNSRQRRGIILLILSVLCALGAFAGVLSVIDDVQSKVGPEVTAYRLKSDIEPYTELGAAQFEKIEMPERWLSDNAVTDLGQVRGKIAVTKLKAGSLLQSDMIVDTPALRPGEQEVAIMIDAATGVAGKITPGSAVNVYATFEGQREGDPDQSKIIVTNAKVIDVGELTSLEPDEDSRDREPTDAVPITFALSTLDAQRLTYAESFARRVRLALVAPGGDSTVPDADRTYELAKDK

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Crispr_ID: NZ_CP036534_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036534_11

6381896-6381977

Orphan

Consensus_repeat	Method
TCCGTCCGCACCGCCTCCTCCTCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036534_11

>merge|NZ_CP036534|11|6381896-6381977|CRISPRCasFinder
ACGGCCCGCACCGCCTCCTCCGTCCGCACCGCCTCCTCCTCCGTCCGCACCATCTCGTCCGTCTGCACCATCTCGTCCGTCC

>NZ_CP036534|11|11|6381896-6381977|CRISPRCasFinder
ACGGCCCGCACCGCCTCCTCCGTCC	GCACCGCCTCCTCCTCCGTCCGCACCATCTCG
TCCGTCTGCACCATCTCGTCCGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036534.1\|WP_037762862.1\|6373674_6374124_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166625143.1\|6374274_6374619_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166625142.1\|6371737_6373138_+\|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl\|CDD\|234757
NZ_CP036534.1\|WP_037762867.1\|6371162_6371618_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166625145.1\|6380222_6380831_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_166625141.1\|6370068_6370905_+\|pyrimidine-reductase-family-protein	unknown	unknown	gnl\|CDD\|184482
NZ_CP036534.1\|WP_031043016.1\|6390193_6390859_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224095
NZ_CP036534.1\|WP_031043013.1\|6389492_6390197_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224095
NZ_CP036534.1\|WP_166625147.1\|6390981_6391944_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270324
NZ_CP036534.1\|WP_079155076.1\|6388317_6389496_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050
NZ_CP036534.1\|WP_037763261.1\|6392017_6392557_-\|ATP/GTP-binding-protein	unknown	unknown	gnl\|CDD\|367304
NZ_CP036534.1\|WP_070389408.1\|6387398_6388181_+\|FAD:protein-FMN-transferase	unknown	unknown	gnl\|CDD\|376782
NZ_CP036534.1\|WP_031042982.1\|6373156_6373564_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|376583
NZ_CP036534.1\|WP_070389404.1\|6378951_6380211_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036534.1\|WP_070390459.1\|6385452_6386802_+\|ferredoxin-reductase-family-protein	unknown	unknown	gnl\|CDD\|99795
NZ_CP036534.1\|WP_070389407.1\|6383190_6384624_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP036534.1\|WP_031043005.1\|6386980_6387397_+\|FMN-binding-protein	unknown	unknown	gnl\|CDD\|377242
NZ_CP036534.1\|WP_037762855.1\|6374627_6375101_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350247
NZ_CP036534.1\|WP_166625144.1\|6375442_6378862_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276938
NZ_CP036534.1\|WP_031043000.1\|6384620_6385364_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
NZ_CP036534.1\|WP_166625142.1\|6371737_6373138_+\|UDP-N-acetylmuramate--L-alanine-ligase	gnl\|CDD\|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	0
NZ_CP036534.1\|WP_079155076.1\|6388317_6389496_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	1.00446e-138
NZ_CP036534.1\|WP_031043000.1\|6384620_6385364_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.05444e-77
NZ_CP036534.1\|WP_166625141.1\|6370068_6370905_+\|pyrimidine-reductase-family-protein	gnl\|CDD\|184482	PRK14059, PRK14059, pyrimidine reductase family protein.	2.01626e-92
NZ_CP036534.1\|WP_031043016.1\|6390193_6390859_+\|ABC-transporter-permease	gnl\|CDD\|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	1.63368e-45
NZ_CP036534.1\|WP_166625147.1\|6390981_6391944_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270324	cd13606, PBP2_ProX_like, Bacterial substrate-binding protein ProX of ABC-type osmoregulated transporter and its related proteins; the type 2 periplasmic-binding protein fold. This group includes periplasmic substrate-binding component of ABC transport systems from gram-negative and -positive bacteria that are involved in uptake of osmoprotectants (also termed compatible solutes) such as betaine, choline, proline betaine, carnitine, and L-proline. To counteract the efflux of water, many microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.20874e-115
NZ_CP036534.1\|WP_037763261.1\|6392017_6392557_-\|ATP/GTP-binding-protein	gnl\|CDD\|367304	pfam03029, ATP_bind_1, Conserved hypothetical ATP binding protein. Members of this family are found in a range of archaea and eukaryotes and have hypothesized ATP binding activity.	8.68397e-46
NZ_CP036534.1\|WP_070389408.1\|6387398_6388181_+\|FAD:protein-FMN-transferase	gnl\|CDD\|376782	pfam02424, ApbE, ApbE family. This prokaryotic family of lipoproteins are related to ApbE from Salmonella typhimurium. ApbE is involved in thiamine synthesis. It acts as an FAD:protein FMN-transferase, catalyzing the attachment of an FMN residue to a threonine residue of a protein via a phosphoester bond in such bacterial flavoproteins.	1.78134e-55
NZ_CP036534.1\|WP_031042982.1\|6373156_6373564_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	4.76666e-78
NZ_CP036534.1\|WP_031043013.1\|6389492_6390197_+\|ABC-transporter-permease-subunit	gnl\|CDD\|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	1.88606e-34
NZ_CP036534.1\|WP_070389407.1\|6383190_6384624_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.22717e-58
NZ_CP036534.1\|WP_031043005.1\|6386980_6387397_+\|FMN-binding-protein	gnl\|CDD\|377242	pfam04205, FMN_bind, FMN-binding domain. This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.	6.29519e-10
NZ_CP036534.1\|WP_037762855.1\|6374627_6375101_+\|hypothetical-protein	gnl\|CDD\|350247	cd18680, PIN_MtVapC20-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC20 and related proteins. M. tuberculosis VapC20 inhibits translation by site-specific cleavage of the universally conserved Sarcin-Ricin loop in 23S rRNA. This subfamily belongs to the VapC (virulence-associated protein C)-like nuclease family of the PIN domain-like superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1.	0.00617422
NZ_CP036534.1\|WP_166625144.1\|6375442_6378862_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	2.59187e-27
NZ_CP036534.1\|WP_070390459.1\|6385452_6386802_+\|ferredoxin-reductase-family-protein	gnl\|CDD\|99795	cd06198, FNR_like_3, NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) which then transfers a hydride ion to convert NADP+ to NADPH.	2.04366e-71

>NZ_CP036534.1|WP_166625145.1|6380222_6380831_+|hypothetical-protein
MASLTATALTADRADGGAVHRVRTVLVDPVSGALTVDEHVRVRCSAPTGWAILGDVLIAPGAGARWAARLAYSCPGALVVAVHSGGRCWLRAGAGGAAAAAVEPVAVSVAVFEVRGPGRARETWDRLASLAHSCLVAGVPGTELGAAVAALEPAVGSLSPGRVGSGTRSAYRPEASPSSRSSRSSRSRSASAPAEPDRPAEA
>NZ_CP036534.1|WP_070389404.1|6378951_6380211_+|hypothetical-protein
MSLTVPEPHARHVPVRMDVDRWATHRSRRRLLVVVHTVVTGQRLLDAIRLLEGDNRVQTFFTQAPDVFSNGVEAFLERLGGLVLPWNQAVLTRFDLALAAGHGNLHDLQTPVVVLPHGAGHNKVVHAVPGNRPAVHRGAYGLSRQRLMRDGAVVPEAIVLAHQEELTRLGQDCPEAVPAAEVVGDPCFDRVAASLPLRALYREALGVRGRLRLVLACSTWGPDSLLGHGWSTLERLVAELPKDEYRTAALLHPHVWNAHGHWQVRAWLAELVRAGLILVSPHADWTGAVVAADHIVGDHGSVSLYGAMTGAPVLMAGRSDAAVDPGSPMAELMSFAPRLREDRPVWQQLKRSSVLRRAQRYERVAARITSEPGRFARRMRALLYRKLRLRAPAVRGPVAEPAGLPLTVRYDDPGAGVSR
>NZ_CP036534.1|WP_166625144.1|6375442_6378862_-|tetratricopeptide-repeat-protein
MPGGLDGGLAGILHSCGSPPAAGVRAPRRCPRAPAIPPLTPRCDRRTVVRVTPAPRPWYAAHPSGETVDLLVLGPLELWHDQRQHALGSLKERCVLAVLLHARGEPVTVDTLMDRVWDGEPPPTAVDTLHTYLSRLRRRLRRAVGDDLAQVRRHSSRTYQLRADPGDIDLLRFNRLRSQAVAAAGRDREVAVGLLRAAEAQWHGEPLAEFADNSWAQSTRARLAEDHRRVREERIRLEMELGRHADLLGELQELASQNPFAQRVIGSLMLALYRSGRHDEALTVFRDTRTRLHRSQGIEPTAELQQLHLRMLEQDHDLLRTGAAGTDTPPAPAALAVSAAPAESLNCLPRDLPDFVGRSGELRILLAGTGTRAGGGREATGGGAGTALPVTVIHGMPGIGKTALAVHAAHQLAPVYPDAQFYVDLRGHSGQQPLDPSDALAVLLHSTGWNGTLPDTSDERATRWREWTARRRALVVLDNARDATQVTPLLPGSPACRVLVTTRSRLAGLDGAAPLFLDTLSEQEAQFLFTRIVGASRVAAEPENLRRVAAACARHPLALQVLASRFRHRDAWDLRHLLDRLAHAHRPLQEFDSLISAVFRFSYTELREPTQDLLRALALHPGPDLTLPAATALSGPVLAEDAALLERCVEELIDSSLLEETVLGRYRLHDLTRSYAVQVGLDTDAEPVRRAATGRLARHYLTQVHRADRLTHPHRRALPLPSSREAAIAPAFSDGDEASVWLTVERANLTAVARIAAAEHPEYAVLFPRTLARQFKLWGAWDEASELFDAALPMLRASDDRAALARTLTDRADLLAQHNHGAALDCATEALAIYGELHDTHGRADALFQSGRARLAAGQGDTALPVLEEARTLYRAVGDPAGEADVLNVQGAALYYAGKYDEALDKVRRMGTIYESLDDFHGQAQALNNRGEILFDQKRYADARDYYDRSLALMRQHGGRVALATLYTNLGAVHQAMGRTPEALAHFERALAAHRAGGDSLGEADTLIRLGTAYAESGRRGEALLHFTMAERVATVIDNPYEGIRASIGAADVQCAAGRLELASQGYERALKVAERIHYALGAAQALSGLARSAALSQRPGVADAHGEQAAARYRSLGAEAEAADLLRFLARHRRATGT
>NZ_CP036534.1|WP_037762855.1|6374627_6375101_+|hypothetical-protein
MPVYDTGMLIALADRKAKAVALHEGLRTTPHRALVLGPVLAQVWRPRPALVHALSGVLKDCTVPRARTSEPPMRETKAGRPECVACATGPDLVDWRRIGTALGQAALPAKKRPDAVDAWVALAAVRHGSAVIFTSDPEDIRAYLSVLAPPDVHVVAV
>NZ_CP036534.1|WP_166625143.1|6374274_6374619_+|hypothetical-protein
MSYGDRVAKVRISISLEPAQAERIKQHAERSGMDVSAYLVHAATRQMADSDAIEEQFAGVDSLIARAEREAADLPEEPAAASVELTEQERREVEDALGLVHGRDRQLRRPGHAA
>NZ_CP036534.1|WP_037762862.1|6373674_6374124_-|hypothetical-protein
MEAELMALVGTGATTVVGLMATDAWEQVRQRVVGLFGSTNETDRTAGELDASRTALLSAGGTADEEGLRSDLTASVRLRLRRLIEEDPGAARELRLLVDEFASTAGLEAPGSVHNSITGGKQEGPVLQGHTFTNLTFHIPGGTAEGRAD
>NZ_CP036534.1|WP_031042982.1|6373156_6373564_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MSYDVEKPDEQWRKELAPAEYAVLREAATEPAFTGEYTDTKTEGVYSCRACGAELFTSTTKFESHCGWPSFFDPKDTDAVELIEDRSHGMVRTEVRCARCGSHLGHVFKGEGYPTPTDQRYCINSISLRLEPERG
>NZ_CP036534.1|WP_166625142.1|6371737_6373138_+|UDP-N-acetylmuramate--L-alanine-ligase
MAPGLPTAMDRPHFIGIGGAGMSGIAKVLAQRGAAVAGSDAKESATAGALRALGATVHIGHAAGHLADDASCVVVSSAIREDNPELARAAELGIPVVHRSDALAALMNGLRPLAVAGTHGKTTTTSMLAVSLSELGLNPSYAIGGDLDEPGSNALHGSGEIFVAEADESDRSFHKYAPEVAIVLNVELDHHANYASMDEIYESFETFADRIVPGGTLVIAADHEGARELTRRLAGTVRTVTYGESEDADVRILSVVPQGLKSEVTVVLDGAELTFGVSVPGRHYAHNAVAALAAGAALGVPAAELAAALAAYTGVKRRLQLKGEAAGVQVVDSYAHHPTEMTADLEAMRAAVGDARILVLFQPHLFSRTQELGKEMGQALALADASVVLDIYPAREDPIPGITSDLIVEAARAAGADVTPVHDKDAASAAVAGMAKAGDLVLTMGAGDVTDLGPRILDELSSQANQ
>NZ_CP036534.1|WP_037762867.1|6371162_6371618_+|hypothetical-protein
MIEKALTSADVEFVTTLHGEETVAFHVLLQPRGDQADRLLRAIDDVALGELDDAVRENETPEGDDAQGVGRRALEVSLTALRASGAEAEGRLIEDHPLDELKSLVLEIGADEVIVLTDPHYVEEFFHRDWASRARHKVGVPVLKLFSHSKA
>NZ_CP036534.1|WP_166625141.1|6370068_6370905_+|pyrimidine-reductase-family-protein
MRRLFPVTDRTAGPDPAPSGARSGADAGSGADATEGDREWSLAELAAAYAYPVPDGRRQTWLRANMVSTLDGAAQHDGRSQPISSAADMRVFGTLRALADVVIAGAETVRQEGYRPARARAEFAEARRAAGQASVPAVAVVSASLELDFSLPLFTAPAVPTLVLTGAAAAPDRMAAAERTGARVVIAGDGVGVDPARALRELAALGHTRLLTEGGPRLLGQFVAAGVLDELCLTVSPMLAAGDAQRIAGGPSVEVPRRFTLASLLEEEGFLFSRYRRA
>NZ_CP036534.1|WP_070389407.1|6383190_6384624_-|HAMP-domain-containing-histidine-kinase
MIRRLWRAYRGLRLGTRLALGLGVLSLVVFAVVGTVLTAYMRDYLERQLADQMKLVQVVQSKDAAAHGTVQRKPYYGWYTAVYDVSGGSADLRTPAEVPADSRSLTELARTMARSEKDITRTVRIGGHGPYLLRACAVEPGVVLVSAAPMGDVEDTVDQLVTVQVIVFGLALAALVVFGRRMLRRGLKPLSDMASTAHGIASHDLTESAARLPLRADGRDGGQEVAELRTAFNTMLEHIDASLAVRAEAEQRLRRFVADASHELRTPLMSVRGYADLFQYAAANEPAERERHLARLRAEAARMGGLLDDLLLLARLDADEVEAPLRREDTDLTELVRQAADAFRAGHPGHPLTLRAGPAAVRAHLDPQRVRQVLDNLLTNAAVHTPPGTAVSVTLSGTPEAARVSVADTGPGIPAADRERIFDRFYRVDKARSRDRGGSGLGLSVAASLVRAHGGTVELTGEPGATVFTVTLPATGH
>NZ_CP036534.1|WP_031043000.1|6384620_6385364_-|response-regulator-transcription-factor
MGRGRPVAQYERVEKVRLLVVDDDPPIADLVATVARYEGWEAVTANSGEQALRLAGDFRPDIVVLDLMLPDVDGFGVLDRLRRSGTMVPVVFLTARDGVADRVAGLTRGGDDYLVKPFAVEELMARLRTVLRRSAGPGFQRSVLRVADLTMDEDTREVRRGERRLSLTPTEYEVLRYLMRKSPTVLTKAQILDHVWEYGFGGRSNVVELVVSRLRRKLDETAPDADGAEPLIQTVRGFGYALRRAAR
>NZ_CP036534.1|WP_070390459.1|6385452_6386802_+|ferredoxin-reductase-family-protein
MTTVPSAPHRPPPPAPALRPKAVARTGLYAILAANAVAVAVLFAQAGFAANTLVVLGRLTGLYGALLMAFQLVLVARLPWFDRRIGMDRLTSWHRWTGFAVLWTLLAHVVFITFGYGRSSGMDPLNQLVDLAETVEGVLRALVALALLVVVGAVSARAARRRMAYETWHFLHLYTYVAVVLAFTHQVAAGTSFTSSPAATAYWYTLWGAALGAVLAGRVVLPLWRNLRHRLRVTAVVPENDHVVSVYLTGRDLDRLPARAGQFFLWRFLTRDRWWQANPFSLSMAPDGRQLRLTVKTAGDGTAALRRIEPGTRVFAEGPYGAFTALHRTRPDTLLVAGGVGVTPIRALLEELPGHAVLVYRVATDRDAVLHDELRDLAHAKGAELHLVTGPAVPDRLGPRDLAALVPDVADRDVYVCGPPGMTTAVLATLRELGVPKAQIHAERFSLAG
>NZ_CP036534.1|WP_031043005.1|6386980_6387397_+|FMN-binding-protein
MKRALPVLVLSIAGLVPVWRYAPSPEAVTAPAASSEASVAPAAPSGGSTVAAGPVVGTEKGPVQVEVTFEERRITAVRMLQQPDHPQTTAAVPRLIEETLDAQSADVDTVSGATITSDGYRESLQAAIDAQAAQGAGA
>NZ_CP036534.1|WP_070389408.1|6387398_6388181_+|FAD:protein-FMN-transferase
MRRVEHVMGFPVSLRLDDPVGPGGVPEAAVDGVFAWLREVDARFSPFRPDSEVSRLDRGEVPRPSAELREVLDLCEEYRAATGGAFDVRLPGRGLDPCAVVKGWSVQRAAESLRAAGARGFCLNAGGDVVAAGGPWRVGVRHPEHADRLCTVLEVADGAVATSARYERGDHIVDGRTGRPATGLLAVTVVAPTLTEADAVATAAFAMGAEGVAWAAAREGCEVFAVDAGRRVLRTPGLPVAGAAPGPGPAAGKEHTATPV
>NZ_CP036534.1|WP_079155076.1|6388317_6389496_+|ABC-transporter-ATP-binding-protein
MIRMESVTKRYADGTVAVDRLSLEIPDRAITVLVGPSGCGKTTTLRMINRMVEPSEGTILLDGEDLQQQPVTTLRRSMGYVIQNAGLFQHRTILDNIATVPRMTGWGKQKSRERAAELMERVGLDSSLGKRYPYQLSGGQQQRVGVARALAADPPVLLMDEPFSAVDPVVRKGLQDELLRIQDELGKTIVFVTHDIDEAIKLGTMVAVMRTGGHLAQFAPPAELLSDPADAFVEDFLGADRGIRGLSFFPSTGLELATGPVVRVDATAEQLTAPGAPYLLVTDADDRPLGWAEPRELRAGEITADALLPYGRPFVAGTDSLRAALDCAVLSPTGWAVAVDAEGRVTGVASQATIGEAIRAAHGTGSTGGARAGERTGDAAADGPADVTKVAP
>NZ_CP036534.1|WP_031043013.1|6389492_6390197_+|ABC-transporter-permease-subunit
MNGFFDIPSDLDNTYFGLIGLHLREALLPVLVGLLAALPVAQLCVRFRWLYPPVLGVTTVFYAVPSLAVFVVLIDYTGQTELTVMIPLAVYSLVVLVPAIVDGVRSVPEETLAASTAMGFGPVRRYLQVQLPIAVPAILAGLRVAVSASISLVSVGALIGNQGALGNLLADAQKYGRPELAVNSVLTTAVLAVLCDALLVLVRNLLTPWMPRGGGGRRPKQAAERPEPQEAATR
>NZ_CP036534.1|WP_031043016.1|6390193_6390859_+|ABC-transporter-permease
MNVLNFVNAFFSDSAHWHGYDGIPQRLLEHVQYTLMALGLAAAVGLPVGLLTGHTGRGGNAVAFVATAARALPSFGLLVLIAVVVGIGLLPVMVPLVVLAIPPILVTTYEAVRSVDPSPVDAARGMGMHESSILFRVELPVALPLVLSGLRSAAIQVVSTATIAAYVSLGGIGRYIIDGLYQRNYEKVVGGASLVAVLALVTLAVFWAAGRLAVSPGVRRR
>NZ_CP036534.1|WP_166625147.1|6390981_6391944_+|ABC-transporter-substrate-binding-protein
MTSSTKSSRSRTRHTGAAAVALTAAAALLAGCSSDSDDTSDNPLAGDKAEAGTVVVGSNNFAESTLLADLYGEALKAKGLKVTYKHNIGSRETTYGLMKNGSVTVLPEYNGSLLAYLDPKAEQGSADAVNEAVKGKLDKKLTLLESSPAENKDSVTVNAETAKKHGLTAESTLADLKDAAPDLVIGGSPEFQTRQQGLKGLESVYGLKFKSFKALDAGGPLTQSALTKNDVQAADVFTTDPTIVKEKFVVLKDSENLFGHANVTPLVTKEGLSDEGVAALNAVSAKLDTETLLDLDAQVQLDKKDPLDVAKEWLKSAGLS
>NZ_CP036534.1|WP_037763261.1|6392017_6392557_-|ATP/GTP-binding-protein
MLIAGGFGVGKTTMVGSVSEIAPLRTEEPLTAAGLDIDDLAGIEEKRATTVALDFGRITITRDLVLYLFGTPGQQRFWFMWNDLAIGALGAVVLVDVRRPESSFAAIDFFERRGIPFVVGVNGFHGRHPYPAAEIREALALPDHVQVLLCDARERTSSRDVLIALIDQLIDAATGAAAS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP036534_10	10.2\|5089513\|17\|NZ_CP036534\|CRISPRCasFinder	5089513-5089529	17	NZ_CP036534.1	4322307-4322323	1	0.941
NZ_CP036534_8	8.1\|2972016\|19\|NZ_CP036534\|CRISPRCasFinder	2972016-2972034	19	NZ_CP036534.1	863200-863218	2	0.895
NZ_CP036534_8	8.1\|2972016\|19\|NZ_CP036534\|CRISPRCasFinder	2972016-2972034	19	NZ_CP036534.1	4974605-4974623	2	0.895
NZ_CP036534_9	9.1\|5089021\|20\|NZ_CP036534\|CRISPRCasFinder	5089021-5089040	20	NZ_CP036534.1	690844-690863	2	0.9
NZ_CP036534_9	9.1\|5089021\|20\|NZ_CP036534\|CRISPRCasFinder	5089021-5089040	20	NZ_CP036534.1	1420709-1420728	2	0.9
NZ_CP036534_9	9.1\|5089021\|20\|NZ_CP036534\|CRISPRCasFinder	5089021-5089040	20	NZ_CP036534.1	2866986-2867005	2	0.9
NZ_CP036534_9	9.1\|5089021\|20\|NZ_CP036534\|CRISPRCasFinder	5089021-5089040	20	NZ_CP036534.1	6528431-6528450	2	0.9
NZ_CP036534_9	9.1\|5089021\|20\|NZ_CP036534\|CRISPRCasFinder	5089021-5089040	20	NZ_CP036534.1	7223003-7223022	2	0.9

1. spacer 10.2|5089513|17|NZ_CP036534|CRISPRCasFinder matches to position: 4322307-4322323, mismatch: 1, identity: 0.941

gcaaggccgaagaggag	CRISPR spacer
gcaaggccgaggaggag	Protospacer
**********.******

2. spacer 8.1|2972016|19|NZ_CP036534|CRISPRCasFinder matches to position: 863200-863218, mismatch: 2, identity: 0.895

gaccgaagtgccctcggac	CRISPR spacer
gaccggagtgcccttggac	Protospacer
*****.********.****

3. spacer 8.1|2972016|19|NZ_CP036534|CRISPRCasFinder matches to position: 4974605-4974623, mismatch: 2, identity: 0.895

gaccgaagtgccctcggac	CRISPR spacer
gacctatgtgccctcggac	Protospacer
**** * ************

4. spacer 9.1|5089021|20|NZ_CP036534|CRISPRCasFinder matches to position: 690844-690863, mismatch: 2, identity: 0.9

cggaggccgaggtcgcggtg	CRISPR spacer
cggaggccgaggccgcgctg	Protospacer
************.**** **

5. spacer 9.1|5089021|20|NZ_CP036534|CRISPRCasFinder matches to position: 1420709-1420728, mismatch: 2, identity: 0.9

cggaggccgaggtcgcggtg	CRISPR spacer
cggcggccgaggacgcggtg	Protospacer
*** ******** *******

6. spacer 9.1|5089021|20|NZ_CP036534|CRISPRCasFinder matches to position: 2866986-2867005, mismatch: 2, identity: 0.9

cggaggccgaggtcgcggtg	CRISPR spacer
cggaggccgagttggcggtg	Protospacer
*********** * ******

7. spacer 9.1|5089021|20|NZ_CP036534|CRISPRCasFinder matches to position: 6528431-6528450, mismatch: 2, identity: 0.9

cggaggccgaggtcgcggtg	CRISPR spacer
cggaggcggaggacgcggtg	Protospacer
******* **** *******

8. spacer 9.1|5089021|20|NZ_CP036534|CRISPRCasFinder matches to position: 7223003-7223022, mismatch: 2, identity: 0.9

cggaggccgaggtcgcggtg	CRISPR spacer
cgcaggccgaggtcgcgctg	Protospacer
** ************** **

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP036534_3	3.1\|1972189\|25\|NZ_CP036534\|CRISPRCasFinder	1972189-1972213	25	MK814753	Microbacterium phage BubbaBear, complete genome	40021-40045	4	0.84
NZ_CP036534_2	2.2\|1631697\|25\|NZ_CP036534\|CRISPRCasFinder	1631697-1631721	25	NZ_CP010857	Marinovum algicola DG 898 plasmid pMaD2, complete sequence	237019-237043	6	0.76
NZ_CP036534_7	7.1\|2359037\|30\|NZ_CP036534\|CRISPRCasFinder	2359037-2359066	30	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	849418-849447	7	0.767
NZ_CP036534_7	7.1\|2359037\|30\|NZ_CP036534\|CRISPRCasFinder	2359037-2359066	30	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	207231-207260	7	0.767
NZ_CP036534_7	7.1\|2359037\|30\|NZ_CP036534\|CRISPRCasFinder	2359037-2359066	30	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	164266-164295	7	0.767
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	200668-200699	7	0.781
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP039920	Agrobacterium tumefaciens strain CFBP6626 plasmid pAtCFBP6626c, complete sequence	23197-23228	7	0.781
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP048637	Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence	105002-105033	7	0.781
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP025510	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvD, complete sequence	10827-10858	7	0.781
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_011370	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence	131365-131396	7	0.781
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP022670	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR5, complete sequence	90530-90561	7	0.781
NZ_CP036534_1	1.2\|851276\|34\|NZ_CP036534\|CRISPRCasFinder	851276-851309	34	NZ_CP021374	Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence	291564-291597	8	0.765
NZ_CP036534_7	7.1\|2359037\|30\|NZ_CP036534\|CRISPRCasFinder	2359037-2359066	30	NZ_CP019319	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-7, complete sequence	11969-11998	8	0.733
NZ_CP036534_7	7.1\|2359037\|30\|NZ_CP036534\|CRISPRCasFinder	2359037-2359066	30	NZ_LT969519	Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 1	314521-314550	8	0.733
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP054030	Rhizobium sp. JKLM19E plasmid pPR19E03	84353-84384	8	0.75
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	201285-201316	8	0.75
NZ_CP036534_7	7.1\|2359037\|30\|NZ_CP036534\|CRISPRCasFinder	2359037-2359066	30	NC_005241	Cupriavidus necator H16 megaplasmid pHG1, complete sequence	145899-145928	9	0.7
NZ_CP036534_7	7.1\|2359037\|30\|NZ_CP036534\|CRISPRCasFinder	2359037-2359066	30	NZ_CP039289	Cupriavidus necator H16 plasmid pHG1, complete sequence	145898-145927	9	0.7
NZ_CP036534_7	7.1\|2359037\|30\|NZ_CP036534\|CRISPRCasFinder	2359037-2359066	30	NZ_CP027237	Actinomyces sp. oral taxon 897 strain F0631 plasmid unnamed1, complete sequence	2453-2482	9	0.7
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP050096	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence	73350-73381	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP050102	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence	73355-73386	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP050107	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence	73332-73363	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_008382	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL7, complete sequence	10836-10867	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP053444	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eB, complete sequence	11307-11338	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	223589-223620	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP050112	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence	73331-73362	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NZ_CP030762	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence	253002-253033	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	KX550443	Mycobacterium phage Magnito, complete genome	28150-28181	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MN369760	Mycobacterium phage KyMonks1A, complete genome	29001-29032	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MH371123	Mycobacterium phage Sandalphon, complete genome	25470-25501	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MH371110	Mycobacterium phage Magnar, complete genome	28398-28429	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MT889374	Mycobacterium phage Firehouse51, complete genome	25473-25504	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MN369755	Mycobacterium phage Minnie, complete genome	25456-25487	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MN586000	Mycobacterium phage Sagefire, complete genome	29508-29539	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MH576974	Mycobacterium phage Sibs6, complete genome	27649-27680	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MK524531	Mycobacterium phage Rutherferd, complete genome	29336-29367	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MN585997	Mycobacterium phage Traft412, complete genome	29578-29609	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_004688	Mycobacterium phage Omega, complete genome	38964-38995	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MK524506	Mycobacterium phage Zeuska, complete genome	29210-29241	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	AY129338	Mycobacterium virus Omega, complete genome	38964-38995	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	KR080201	Mycobacterium phage Nerujay, complete genome	29140-29171	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	KX853513	Uncultured virus isolate Rctr41k, partial genome	14498-14529	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MH651178	Mycobacterium phage KristaRAM, complete genome	25587-25618	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MH590595	Mycobacterium phage NEHalo, complete genome	28472-28503	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MK359304	Mycobacterium phage SpikeBT, complete genome	29578-29609	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	JN572689	Mycobacterium phage Perseus, complete genome	29559-29590	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	KM597531	Mycobacterium phage Abrogate, complete genome	29440-29471	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_023723	Mycobacterium phage Aeneas, complete genome	29018-29049	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_028941	Mycobacterium phage Turj99, complete genome	28420-28451	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MN428054	Mycobacterium phage JackSparrow, complete genome	29025-29056	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_022329	Mycobacterium phage PhrostyMug, complete genome	28722-28753	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MN369752	Mycobacterium phage Flathead, complete genome	24781-24812	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_042321	Mycobacterium virus Lesedi, complete genome	28426-28457	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	EU744249	Mycobacterium phage Lockley, complete genome	28613-28644	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	HQ728524	Mycobacterium phage Wee, complete genome	25486-25517	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MK359300	Mycobacterium phage AFIS, complete genome	28765-28796	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_042327	Mycobacterium virus BBPiebs31, complete genome	28982-29013	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	JN020142	Mycobacterium phage Mutaforma13, complete genome	24960-24991	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	KF279416	Mycobacterium phage SargentShorty9, complete genome	28731-28762	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	JQ698665	Mycobacterium phage Nepal, complete genome	29020-29051	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_023728	Mycobacterium virus DeadP, complete genome	24945-24976	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	EU744252	Mycobacterium phage DD5, complete genome	29379-29410	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	NC_025433	Mycobacteriophage Taj, complete genome	24947-24978	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	KF024724	Mycobacterium phage Trouble, complete genome	29481-29512	9	0.719
NZ_CP036534_11	11.1\|6381921\|32\|NZ_CP036534\|CRISPRCasFinder	6381921-6381952	32	MN693412	Marine virus AFVG_25M431, complete genome	26746-26777	10	0.688

1. spacer 3.1|1972189|25|NZ_CP036534|CRISPRCasFinder matches to MK814753 (Microbacterium phage BubbaBear, complete genome) position: , mismatch: 4, identity: 0.84

agggcgggccggaggtgggtcgcat	CRISPR spacer
tggtcgggccggagctgggtcgcaa	Protospacer
 ** ********** *********

2. spacer 2.2|1631697|25|NZ_CP036534|CRISPRCasFinder matches to NZ_CP010857 (Marinovum algicola DG 898 plasmid pMaD2, complete sequence) position: , mismatch: 6, identity: 0.76

aagtaacggaagcagcggaagaaac	CRISPR spacer
cctggccggaagcagcggaagaaac	Protospacer
    . *******************

3. spacer 7.1|2359037|30|NZ_CP036534|CRISPRCasFinder matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 7, identity: 0.767

cacctgcgcgccgtgggtcaggtcggtggt	CRISPR spacer
caccttcgcgccgtgcgtcaggtggccgcc	Protospacer
***** ********* ******* * .* .

4. spacer 7.1|2359037|30|NZ_CP036534|CRISPRCasFinder matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 7, identity: 0.767

cacctgcgcgccgtgggtcaggtcggtggt	CRISPR spacer
caccggcgagccgtgggtcaggtggccgcc	Protospacer
**** *** ************** * .* .

5. spacer 7.1|2359037|30|NZ_CP036534|CRISPRCasFinder matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

cacctgc-----gcgccgtgggtcaggtcggtggt	CRISPR spacer
-----gctgaaggcgccgggggtcaggtcgatggt	Protospacer
     **     ****** ***********.****

6. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.781

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
atccggtctcctcctccgtccgctccacctcg	Protospacer
.. * *.**************** ***.****

7. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP039920 (Agrobacterium tumefaciens strain CFBP6626 plasmid pAtCFBP6626c, complete sequence) position: , mismatch: 7, identity: 0.781

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gcggcctcccctcctccgacagcaccatctcg	Protospacer
**. * .*.********* * ***********

8. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP048637 (Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence) position: , mismatch: 7, identity: 0.781

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gcggcctcccctcctccgacagcaccatctcg	Protospacer
**. * .*.********* * ***********

9. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP025510 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvD, complete sequence) position: , mismatch: 7, identity: 0.781

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gcggccgcccctcctccgacagcaccatctcg	Protospacer
**. *  *.********* * ***********

10. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_011370 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence) position: , mismatch: 7, identity: 0.781

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gcgacctcccctcctccgacagcaccatctcg	Protospacer
**. * .*.********* * ***********

11. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP022670 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR5, complete sequence) position: , mismatch: 7, identity: 0.781

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gcggccgcccctcctccgacagcaccatctcg	Protospacer
**. *  *.********* * ***********

12. spacer 1.2|851276|34|NZ_CP036534|CRISPRCasFinder matches to NZ_CP021374 (Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence) position: , mismatch: 8, identity: 0.765

acgacggcggggcccgtcagccgagccagcccgg------	CRISPR spacer
acgagggcggggctcgtcagccga------ccggcagtca	Protospacer
**** ********.**********      ****

13. spacer 7.1|2359037|30|NZ_CP036534|CRISPRCasFinder matches to NZ_CP019319 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-7, complete sequence) position: , mismatch: 8, identity: 0.733

cacctgcgcgccgtgggtcaggtcggtggt	CRISPR spacer
atgctgcacgccgcgggtcaggtcggtccg	Protospacer
   ****.*****.*************

14. spacer 7.1|2359037|30|NZ_CP036534|CRISPRCasFinder matches to NZ_LT969519 (Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 1) position: , mismatch: 8, identity: 0.733

cacctgcgcgccgtgggtcaggtcggtggt	CRISPR spacer
caccttggcgccgtgggtcaggtggccacc	Protospacer
*****  **************** * .. .

15. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP054030 (Rhizobium sp. JKLM19E plasmid pPR19E03) position: , mismatch: 8, identity: 0.75

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gcggtctcccctcctccgacagcaccatctcg	Protospacer
**. . .*.********* * ***********

16. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 8, identity: 0.75

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gcggccttccctcctccgacagcaccatctcg	Protospacer
**. * ...********* * ***********

17. spacer 7.1|2359037|30|NZ_CP036534|CRISPRCasFinder matches to NC_005241 (Cupriavidus necator H16 megaplasmid pHG1, complete sequence) position: , mismatch: 9, identity: 0.7

cacctgcgcgccgtgggtcaggtcggtggt	CRISPR spacer
gcgtggcgcgccgtgggttaggttggtgtg	Protospacer
   . *************.****.****

18. spacer 7.1|2359037|30|NZ_CP036534|CRISPRCasFinder matches to NZ_CP039289 (Cupriavidus necator H16 plasmid pHG1, complete sequence) position: , mismatch: 9, identity: 0.7

cacctgcgcgccgtgggtcaggtcggtggt	CRISPR spacer
gcgtggcgcgccgtgggttaggttggtgtg	Protospacer
   . *************.****.****

19. spacer 7.1|2359037|30|NZ_CP036534|CRISPRCasFinder matches to NZ_CP027237 (Actinomyces sp. oral taxon 897 strain F0631 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

cacctgcgcgccgtgggtcaggtcggtggt	CRISPR spacer
gatgctggcgccctgggtcaggtcggtgac	Protospacer
 *. .  ***** ***************..

20. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP050096 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gtggccgtccctcctccgacagcaccatctcg	Protospacer
*.. *  ..********* * ***********

21. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP050102 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gtggccgtccctcctccgacagcaccatctcg	Protospacer
*.. *  ..********* * ***********

22. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP050107 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gtggccgtccctcctccgacagcaccatctcg	Protospacer
*.. *  ..********* * ***********

23. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_008382 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL7, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gtggccgtccctcctccgacagcaccatctcg	Protospacer
*.. *  ..********* * ***********

24. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP053444 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eB, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gtggccgtccctcctccgacagcaccatctcg	Protospacer
*.. *  ..********* * ***********

25. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gtggccgtccctcctccgacagcaccatctcg	Protospacer
*.. *  ..********* * ***********

26. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP050112 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gtggccgtccctcctccgacagcaccatctcg	Protospacer
*.. *  ..********* * ***********

27. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NZ_CP030762 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
gtggccgtccctcctccgacagcaccatctcg	Protospacer
*.. *  ..********* * ***********

28. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to KX550443 (Mycobacterium phage Magnito, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

29. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MN369760 (Mycobacterium phage KyMonks1A, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

30. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MH371123 (Mycobacterium phage Sandalphon, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

31. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MH371110 (Mycobacterium phage Magnar, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

32. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MT889374 (Mycobacterium phage Firehouse51, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

33. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MN369755 (Mycobacterium phage Minnie, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

34. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MN586000 (Mycobacterium phage Sagefire, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

35. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MH576974 (Mycobacterium phage Sibs6, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

36. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MK524531 (Mycobacterium phage Rutherferd, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

37. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MN585997 (Mycobacterium phage Traft412, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

38. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_004688 (Mycobacterium phage Omega, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

39. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MK524506 (Mycobacterium phage Zeuska, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

40. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to AY129338 (Mycobacterium virus Omega, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

41. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to KR080201 (Mycobacterium phage Nerujay, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

42. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to KX853513 (Uncultured virus isolate Rctr41k, partial genome) position: , mismatch: 9, identity: 0.719

gcac-cgcctcctcctccgtccgcaccatctcg	CRISPR spacer
-cgcgcgcctcctccaccttccgcaccagtgtc	Protospacer
 *.* ********** ** ********* . .

43. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MH651178 (Mycobacterium phage KristaRAM, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

44. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MH590595 (Mycobacterium phage NEHalo, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

45. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MK359304 (Mycobacterium phage SpikeBT, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

46. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to JN572689 (Mycobacterium phage Perseus, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

47. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to KM597531 (Mycobacterium phage Abrogate, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

48. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_023723 (Mycobacterium phage Aeneas, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

49. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_028941 (Mycobacterium phage Turj99, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

50. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MN428054 (Mycobacterium phage JackSparrow, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

51. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_022329 (Mycobacterium phage PhrostyMug, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

52. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MN369752 (Mycobacterium phage Flathead, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

53. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_042321 (Mycobacterium virus Lesedi, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

54. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to EU744249 (Mycobacterium phage Lockley, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

55. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to HQ728524 (Mycobacterium phage Wee, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

56. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MK359300 (Mycobacterium phage AFIS, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

57. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_042327 (Mycobacterium virus BBPiebs31, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

58. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to JN020142 (Mycobacterium phage Mutaforma13, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

59. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to KF279416 (Mycobacterium phage SargentShorty9, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

60. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to JQ698665 (Mycobacterium phage Nepal, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

61. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_023728 (Mycobacterium virus DeadP, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

62. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to EU744252 (Mycobacterium phage DD5, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

63. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to NC_025433 (Mycobacteriophage Taj, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

64. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to KF024724 (Mycobacterium phage Trouble, complete genome) position: , mismatch: 9, identity: 0.719

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
cggccgcctcctccgccgcccgcacctgcacc	Protospacer
  .*********** ***.*******  * *

65. spacer 11.1|6381921|32|NZ_CP036534|CRISPRCasFinder matches to MN693412 (Marine virus AFVG_25M431, complete genome) position: , mismatch: 10, identity: 0.688

gcaccgcctcctcctccgtccgcaccatctcg	CRISPR spacer
tctggtggtcctcctccatccccaccatctcc	Protospacer
 *      *********.*** *********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3488618 : 3544172

Bacillus_phage(42.86%)

tRNA,plate,protease,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037769751.1\|3488618_3490220_+\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	3.1e-62	33.0
WP_031038304.1\|3490326_3490773_+\|tail	phage tail protein	NA	NA	NA	NA
WP_031038305.1\|3490772_3491303_+	hypothetical protein	NA	NA	NA	NA
WP_164711394.1\|3491299_3491458_+	hypothetical protein	NA	NA	NA	NA
WP_166624341.1\|3491391_3493818_-	hypothetical protein	NA	NA	NA	NA
WP_157852281.1\|3493881_3494124_-	hypothetical protein	NA	NA	NA	NA
WP_166625990.1\|3494419_3495619_+	hypothetical protein	NA	NA	NA	NA
WP_031045606.1\|3495698_3496121_+\|tail	phage tail protein	NA	NA	NA	NA
WP_031045602.1\|3496153_3496873_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_037769753.1\|3496872_3498789_+	VgrG-related protein	NA	NA	NA	NA
WP_031045595.1\|3498859_3499330_+	GPW/gp25 family protein	A0A1D8KR06	Synechococcus_phage	2.8e-11	30.5
WP_031045592.1\|3499329_3501288_+\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_051159849.1\|3501347_3501857_+\|tail	phage tail protein	NA	NA	NA	NA
WP_070388406.1\|3501853_3503221_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_166624342.1\|3503682_3505335_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_166624343.1\|3505424_3506249_+	putative protein N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_031045577.1\|3506579_3507716_+	diacetylchitobiose ABC transporter ATP-binding protein MsiK	Q6GZ03	Mycoplasma_phage	3.2e-21	38.4
WP_031045575.1\|3507981_3508437_+	hypothetical protein	NA	NA	NA	NA
WP_166624344.1\|3508515_3509253_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_037769761.1\|3509316_3510201_-	hypothetical protein	NA	NA	NA	NA
WP_037769767.1\|3511010_3511886_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_166624345.1\|3511882_3512080_+	DUF397 domain-containing protein	NA	NA	NA	NA
WP_078536020.1\|3512150_3513863_-	DoxX family membrane protein	NA	NA	NA	NA
WP_037769772.1\|3513991_3514933_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_070388417.1\|3515055_3516456_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	1.3e-40	29.9
WP_166624346.1\|3516746_3517280_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_031045548.1\|3517269_3518058_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_003953493.1\|3518400_3518883_-	CarD family transcriptional regulator	NA	NA	NA	NA
WP_078536021.1\|3518844_3519057_+	hypothetical protein	NA	NA	NA	NA
WP_166624347.1\|3519525_3520263_+	DUF461 domain-containing protein	NA	NA	NA	NA
WP_003974745.1\|3520358_3521039_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.1e-40	39.0
WP_031045533.1\|3521035_3522307_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.6e-29	31.5
WP_037769786.1\|3522531_3523221_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_164711395.1\|3523333_3523489_+	hypothetical protein	NA	NA	NA	NA
WP_051159842.1\|3523792_3524149_+	hypothetical protein	NA	NA	NA	NA
WP_166624348.1\|3524198_3525467_+	lanthionine synthetase C family protein	NA	NA	NA	NA
WP_166624349.1\|3525543_3526413_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_166624350.1\|3526484_3526865_-	VOC family protein	NA	NA	NA	NA
WP_166625991.1\|3527166_3528654_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.5e-61	35.5
WP_166624351.1\|3528672_3530679_+	CocE/NonD family hydrolase	NA	NA	NA	NA
WP_166625992.1\|3530764_3531799_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_031045512.1\|3531802_3532237_+	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA
WP_031045509.1\|3532384_3533356_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_070388424.1\|3533542_3534772_+	NAD(P)-binding protein	NA	NA	NA	NA
WP_031045504.1\|3534824_3535280_+	VOC family protein	NA	NA	NA	NA
WP_166625993.1\|3535411_3536392_+	hypothetical protein	NA	NA	NA	NA
WP_166624352.1\|3536482_3537445_-	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_166624353.1\|3537664_3540223_+	AAA family ATPase	NA	NA	NA	NA
WP_166624354.1\|3541060_3541693_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_166624355.1\|3541747_3542143_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_166625994.1\|3542597_3544172_+\|protease	trypsin-like serine protease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP036534

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection