CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP050176	Streptococcus pneumoniae strain PZ900701590 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP050175	Streptococcus pneumoniae strain PZ900701590 chromosome, complete genome	3 crisprs	DEDDh,PrimPol,cas3,DinG,RT	0	1	13	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050175_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050175_1

98620-98715

Orphan

Consensus_repeat	Method
AATGTGTAAGATTTTTATATATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050175_1

>merge|NZ_CP050175|1|98620-98715|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAATTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGAAATGTGTAAAATTTTTATATATAA

>NZ_CP050175|1|1|98620-98715|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAA	TTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGA
AATGTGTAAAATTTTTATATATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050175.1\|WP_000273863.1\|98275_98602_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP050175.1\|WP_000800407.1\|91664_93140_+\|DUF3502-domain-containing-protein	unknown	unknown	gnl\|CDD\|378792
NZ_CP050175.1\|WP_000808453.1\|95665_96730_-\|membrane-protein	unknown	unknown	gnl\|CDD\|370966
NZ_CP050175.1\|WP_000198688.1\|97695_98289_-\|DUF1700-domain-containing-protein	unknown	unknown	gnl\|CDD\|227053
NZ_CP050175.1\|WP_000836444.1\|105944_106517_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030
NZ_CP050175.1\|WP_000724268.1\|107659_109768_+\|bacteriocin-associated-integral-membrane-family-protein	unknown	unknown	gnl\|CDD\|273736
NZ_CP050175.1\|WP_000838912.1\|105031_105703_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	unknown	unknown	gnl\|CDD\|224674
NZ_CP050175.1\|WP_001075102.1\|90637_91561_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP050175.1\|WP_001842143.1\|88925_89201_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050175.1\|WP_001809441.1\|89154_89376_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050175.1\|WP_000200892.1\|103496_104129_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319798
NZ_CP050175.1\|WP_000714582.1\|89694_90624_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP050175.1\|WP_001030029.1\|93411_94398_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|234663
NZ_CP050175.1\|WP_000096193.1\|99964_101122_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133016
NZ_CP050175.1\|WP_000744907.1\|98740_99907_-\|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340897
NZ_CP050175.1\|WP_001189283.1\|106569_106890_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050175.1\|WP_001035702.1\|101163_103014_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NZ_CP050175.1\|WP_050200248.1\|96791_97703_-\|DUF4097-domain-containing-protein	unknown	unknown	gnl\|CDD\|372574
NZ_CP050175.1\|WP_000500038.1\|104150_105023_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_CP050175.1\|WP_001230166.1\|107320_107608_+\|lactococcin-972-family-bacteriocin	unknown	unknown	gnl\|CDD\|273735

Protein	Function_ID	Function_description	E-value
NZ_CP050175.1\|WP_000273863.1\|98275_98602_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	8.86871e-19
NZ_CP050175.1\|WP_000800407.1\|91664_93140_+\|DUF3502-domain-containing-protein	gnl\|CDD\|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	4.24398e-44
NZ_CP050175.1\|WP_000808453.1\|95665_96730_-\|membrane-protein	gnl\|CDD\|370966	pfam10310, DUF5427, Family of unknown function (DUF5427). This is a domain of unknown function. Family members found in Saccharomyces cerevisiae, are synthetic lethal with genes involved in maintenance of telomere capping. However, experimental evidence is yet to verify the exact function of family members and the domain.	8.96536e-06
NZ_CP050175.1\|WP_000198688.1\|97695_98289_-\|DUF1700-domain-containing-protein	gnl\|CDD\|227053	COG4709, COG4709, Predicted membrane protein [Function unknown].	1.19707e-63
NZ_CP050175.1\|WP_000836444.1\|105944_106517_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	5.74081e-13
NZ_CP050175.1\|WP_000724268.1\|107659_109768_+\|bacteriocin-associated-integral-membrane-family-protein	gnl\|CDD\|273736	TIGR01654, unnamed_protein_product, bacteriocin-associated integral membrane (putative immunity) protein. This model represents a family of integral membrane proteins, most of which are about 650 residues in size and predicted to span the membrane seven times. Nearly half of the members of this family are found in association with a member of the lactococcin 972 family of bacteriocins (TIGR01653). Others may be associated with uncharacterized proteins that may also act as bacteriocins. Although this protein is suggested to be an immunity protein, and the bacteriocin is suggested to be exported by a Sec-dependent process, the role of this protein is unclear. [Cellular processes, Toxin production and resistance].	0
NZ_CP050175.1\|WP_000838912.1\|105031_105703_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	gnl\|CDD\|224674	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism].	1.1908e-89
NZ_CP050175.1\|WP_001075102.1\|90637_91561_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.04007e-69
NZ_CP050175.1\|WP_001035702.1\|101163_103014_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_CP050175.1\|WP_000200892.1\|103496_104129_-\|HAD-family-hydrolase	gnl\|CDD\|319798	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065. 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.4095e-97
NZ_CP050175.1\|WP_000714582.1\|89694_90624_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	3.01638e-143
NZ_CP050175.1\|WP_001030029.1\|93411_94398_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	0
NZ_CP050175.1\|WP_000096193.1\|99964_101122_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	5.52043e-109
NZ_CP050175.1\|WP_000744907.1\|98740_99907_-\|CynX/NimT-family-MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.12983e-126
NZ_CP050175.1\|WP_050200248.1\|96791_97703_-\|DUF4097-domain-containing-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	2.94549e-38
NZ_CP050175.1\|WP_000500038.1\|104150_105023_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	2.65225e-106
NZ_CP050175.1\|WP_001230166.1\|107320_107608_+\|lactococcin-972-family-bacteriocin	gnl\|CDD\|273735	TIGR01653, hypothetical_protein, bacteriocin, lactococcin 972 family. This model represents bacteriocins related to lactococcin 972. Members tend to be found in association with a seven transmembrane putative immunity protein. [Cellular processes, Toxin production and resistance].	2.10536e-25

>NZ_CP050175.1|WP_000273863.1|98275_98602_-|PadR-family-transcriptional-regulator
MYFPTSSALIEFLILAVLEQGDSYGYEISQTIKLIANIKESTLYPILKKLEGNSFLTTYSREFQGRMRKYYSLTNGGIEQLLTLKDEWALYTDTINGIIEGSIRHDKN
>NZ_CP050175.1|WP_000198688.1|97695_98289_-|DUF1700-domain-containing-protein
MTRTEYLTQLELYLKKLPEADRIEAMDYFRELFDDAGVEGEEELIASLGTPKEAAHEVLSNLLDKKINEAPAQKNNRQILHIALLALLAAPIGIPLGIAILVTLFAILVAALTVILAFFAVSILGIIGGFLFLVESFTILAQAKSAFILIFGSGLLAIGASSLVLLGISYVTRFFGLLIVRLVQFVLKKGKRGNQHA
>NZ_CP050175.1|WP_050200248.1|96791_97703_-|DUF4097-domain-containing-protein
MRKWTKGFLIFGVVTTVIGFILLFVGIQSDGIKSLLSMSKEPIYDSRTEKLTFGKEVENLEITLHQHALTITDSFDDQIHISYHPSLSAHHDLITNQNDRTLSLTDKKLSETPFLSSGIGGILHIASSYSSRFEEVILQLPKGRTLKGINISANRGQTTIINASLENATLNTNSYILRIEGSRIKNSKLTTPNIVNIFDTVLTDSQLESTENHFHAENIQVHGKVELTAKDYLRIILDQKENQRINWDISSNYGSIFQFTREKPESRGTELSNPYKTEKTDVKDQLIARSDDNIDLISTPSRR
>NZ_CP050175.1|WP_000808453.1|95665_96730_-|membrane-protein
MKQEWFESNDFVKTTSKNKPEEQAQEVADKAEETIADLDTPIGKNTQVEEEVSQAEVELESQQEEKIETPEDSEARTEIEEKKASNSTEEEPDLSKETEKVTIAEESQEALPQQKATTKEPLLISKSLESPYIPDQAPKSRDKWKEQVLDFWSWLVEAIKSPTSKLETSITHSYTAFLLLILFSASSFFFSIYHIKHAYYGHIASINSRFPEQLAPLTLFSIISILVATTLFFFSFLLGSFVVRRFIHQEKDWTLDKVLQQYSQLLAIPIFLTAIASFFAFFDSLRFTALLCVISIGIILLASLHIITRPSQASETDSFYQLFLSVLVNGVIILLFFVAEVALIGDYLRILAFL
>NZ_CP050175.1|WP_001030029.1|93411_94398_+|rhodanese-related-sulfurtransferase
MAKDIRVLLYYLYTPIENAEQFAADHLAFCKSIGLKGRILVADEGINGTVSGDYETTQKYMDYVHSLPGMEDLWFKIDEESEQAFKKMFVRYKKEIVHLGLEDNDFDNDINPLETTGAYLSPKEFKEALLDKDTVVLDTRNDYEYDLGHFRGAIRPDIRNFRELPQWVRDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGNPFCNRRILTSEENEDKYLRGCSHECRVHPRNRYVSKNELTQAEVIERLAAIGESLDQAATV
>NZ_CP050175.1|WP_000800407.1|91664_93140_+|DUF3502-domain-containing-protein
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLGWGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYEVPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENVTDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQKQYDEFLKNKK
>NZ_CP050175.1|WP_001075102.1|90637_91561_+|carbohydrate-ABC-transporter-permease
MAKKKIKKEKIDNVGIHSFSKKADIFFSIISGLIALSCILPFVFVIIISVTDEKSLLQYGYSFFPSQFGLDGFEFLAQFKDKILQALFISVFVTVVGTLTNVFITTTYAYAISRTTFKYRRFFTIFVLLSMLFNAGLVPGYIMVTRVLQLGDTVWALIVPMLLSPFNIILMRSFFKKTIPEAILESARIDGASEARIFFQICLPLSLPGIATITLLTALGFWNDWFNALLYIKSDNLYPLQYLLMQIQQNMDYIAKAVGLTGQLGVALPKETGRMAMVVVATLPIAILYPFFQRYFVKGLTIGGVKE
>NZ_CP050175.1|WP_000714582.1|89694_90624_+|sugar-ABC-transporter-permease
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFYADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADFGLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF
>NZ_CP050175.1|WP_001809441.1|89154_89376_+|hypothetical-protein
MSLQIKLKKLAKELSKLLKDSNLETVDKDVLENSQKELQKAVLFLADEKGSEHTEAEVIDNLKEVIAKLKANA
>NZ_CP050175.1|WP_001842143.1|88925_89201_+|hypothetical-protein
MTGVSNPTTDSARLVLAEAKKAFADDSLTEQGLRDILQTVKDAIASLESIKESQSATKDGGQTAGKETAGKETAGEDESANQTQEISQGIK
>NZ_CP050175.1|WP_000744907.1|98740_99907_-|CynX/NimT-family-MFS-transporter
MKKQSLFFVPGIILIGVSLRTPFTVLPIILGNISQGLEVEVSSLGVLTSLPLLMFTLFSPFSTRLAQKIGLEHLFTYSLFFLTIGSLIRLINLPLLYLGTLMVGASVAVINVLLPSLIQANQPKKIGFLTTLYVTSMGIATALASYLAVPITQASSWKGLILLLTLLCLATFLVWLPNHRYNHRLAPQTKQKSQIKVMRNKQVWAIIIFSGFQSLIFYTVMTWLPTMSIHAGLSSHEAGLLTSILSLISIPFSMTIPSLTTSLSTRNRQLMLTLVSLAGVVGISMLFFPINNFIYWLAIHLLIGTATSALFPYLMVNFSLKTSAPEKTAQLSGLSQTGGYILAAFGPTLFGYSFDLFHSWVPSVAALLLIDILMTVALFTVDRADKIL
>NZ_CP050175.1|WP_000096193.1|99964_101122_+|glycosyltransferase-family-2-protein
MSSKVSGFQDKNGKVLKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIEDLKNQTYPKENIEILFINAMSTDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVKHSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRPTIVEGKGKWAETLHLVEENMFGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIRYSPSILSYQYIRPTFKKMLHQKYSNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLALLPITFVFITLLLGAYFLLLSLLTLLTLLKHKNGFLIVMPFLLFSIHFAYGLGTIVGLIRGFKWKKEYKRTIIYLDKISQINKNML
>NZ_CP050175.1|WP_001035702.1|101163_103014_+|polysaccharide-biosynthesis-protein
MNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTSLAFLFYQLMIGFWGLNASISRYSKITDFMKIFFGVTASSVLSYSICYAFLPLFSIRFIILFILLSTFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFMDSYQHPTSELELVGILDKDSKKKGQKLGGIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQVSRFNPERIVLLGHGENSIYLVYHELIRKFQGIDYVPVIADIQDYDRLLQVFEQYKPAIVYHAAAHKHVPMMERNPKEAFKNNIRGTYNVARAVDEAKVPKMVMISTDKAVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFANQTTHIE
>NZ_CP050175.1|WP_000200892.1|103496_104129_-|HAD-family-hydrolase
MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYFQ
>NZ_CP050175.1|WP_000500038.1|104150_105023_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNENKSRSGLTGGDAAKLDHYIENGKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAGCLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALAGIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
>NZ_CP050175.1|WP_000838912.1|105031_105703_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta
MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRGHGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHKTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
>NZ_CP050175.1|WP_000836444.1|105944_106517_+|LysM-peptidoglycan-binding-domain-containing-protein
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAENNHIDNIHLIYVDQELVIDGPVAPVATPAPATYAAPAAQDETVSAPVVSETVVSTVSGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNGDYSAENQERVADAYVAGRYGSWTAAKNFWLNNGWY
>NZ_CP050175.1|WP_001189283.1|106569_106890_-|hypothetical-protein
MQRLEVYKNYQHLYDLRIAILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAICYVRIGICTDNAKLIQKGFSLLELTEETSMLSHLKKEVETHYQPKKL
>NZ_CP050175.1|WP_001230166.1|107320_107608_+|lactococcin-972-family-bacteriocin
MRKLVKIGVASLMVCGILATTNALAVWVEGGQWNYGVGWTGTFGYSDYLHSTRYHTATVRHGGRTSKDYAKPEAWARASLTKIPPTVMEYFYGFE
>NZ_CP050175.1|WP_000724268.1|107659_109768_+|bacteriocin-associated-integral-membrane-family-protein
MKKISNFCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKDRIVQKWSDFFKIDQATVLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLADVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQAGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSMKYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYRPLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP050175_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050175_2

1013340-1013443

Orphan

Consensus_repeat	Method
ATAGGGGATTTACCCACTACAAATATTATAGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050175_2

>merge|NZ_CP050175|2|1013340-1013443|CRISPRCasFinder
ATAGGGGATTTACCCACTACAAATATTATAGAGCCCTTTTTTTCTACAATAAAATAGGCTCCATAATATCTATAGTGGATTTACCCACTACAAATATTATAGAG

>NZ_CP050175|2|2|1013340-1013443|CRISPRCasFinder
ATAGGGGATTTACCCACTACAAATATTATAGAG	CCCTTTTTTTCTACAATAAAATAGGCTCCATAATATCT
ATAGTGGATTTACCCACTACAAATATTATAGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050175.1\|WP_000981526.1\|1013502_1013802_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_CP050175.1\|WP_000653403.1\|1004338_1004980_-\|redox-sensing-transcriptional-repressor-Rex	unknown	unknown	gnl\|CDD\|225221
NZ_CP050175.1\|WP_000916509.1\|1015780_1016074_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NZ_CP050175.1\|WP_000161388.1\|1018920_1019760_+\|DegV-family-protein	unknown	unknown	gnl\|CDD\|273257
NZ_CP050175.1\|WP_000171676.1\|1008531_1009203_+\|GTP-pyrophosphokinase-family-protein	unknown	unknown	gnl\|CDD\|225232
NZ_CP050175.1\|WP_001284639.1\|1019866_1020142_+\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259853
NZ_CP050175.1\|WP_000863509.1\|1005285_1005633_-\|DUF1831-domain-containing-protein	unknown	unknown	gnl\|CDD\|370163
NZ_CP050175.1\|WP_001283813.1\|1006762_1007722_-\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|235039
NZ_CP050175.1\|WP_166735691.1\|1014203_1014902_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|226146
NZ_CP050175.1\|WP_000451584.1\|1010941_1011916_+\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236609
NZ_CP050175.1\|WP_033705407.1\|1005637_1006753_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_CP050175.1\|WP_001210006.1\|1010001_1010898_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP050175.1\|WP_000799053.1\|1009186_1010005_+\|NAD-kinase	unknown	unknown	gnl\|CDD\|235317
NZ_CP050175.1\|WP_000587446.1\|1016920_1017838_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP050175.1\|WP_000681292.1\|1007834_1008404_-\|CYTH-domain-containing-protein	unknown	unknown	gnl\|CDD\|226601
NZ_CP050175.1\|WP_000592059.1\|1017930_1018779_-\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_CP050175.1\|WP_000530084.1\|1020346_1021603_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|225995
NZ_CP050175.1\|WP_001819404.1\|1005134_1005278_-\|DUF4649-family-protein	unknown	unknown	gnl\|CDD\|339492
NZ_CP050175.1\|WP_000109141.1\|1015089_1015404_+\|50S-ribosomal-protein-L21	unknown	unknown	gnl\|CDD\|235510
NZ_CP050175.1\|WP_000613700.1\|1015419_1015764_+\|ribosomal-processing-cysteine-protease-Prp	unknown	unknown	gnl\|CDD\|225423

Protein	Function_ID	Function_description	E-value
NZ_CP050175.1\|WP_000981526.1\|1013502_1013802_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	1.2452e-33
NZ_CP050175.1\|WP_000653403.1\|1004338_1004980_-\|redox-sensing-transcriptional-repressor-Rex	gnl\|CDD\|225221	COG2344, COG2344, AT-rich DNA-binding protein [General function prediction only].	1.79308e-117
NZ_CP050175.1\|WP_000916509.1\|1015780_1016074_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	6.08512e-51
NZ_CP050175.1\|WP_000161388.1\|1018920_1019760_+\|DegV-family-protein	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	3.19762e-111
NZ_CP050175.1\|WP_000171676.1\|1008531_1009203_+\|GTP-pyrophosphokinase-family-protein	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	7.7772e-102
NZ_CP050175.1\|WP_001284639.1\|1019866_1020142_+\|HU-family-DNA-binding-protein	gnl\|CDD\|259853	cd13831, HU, histone-like DNA-binding protein HU. This subfamily includes HU and HU-like domains. HU is a conserved nucleoid-associated protein (NAP) which binds non-specifically to duplex DNA with a particular preference for targeting nicked and bent DNA. It is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. HU can induce DNA bends, condense DNA in a fiber and also interact with single stranded DNA. It contains two homologous subunits, alpha and beta, typically forming homodimers (alpha-alpha and beta-beta), except in E. coli and other enterobacteria, which form heterodimers (alpha-beta). In E. coli, HU binds uniformly to the chromosome, with a preference for damaged or distorted DNA structures and can introduce negative supercoils into closed circular DNA in the presence of topoisomerase I. Anabaena HU (AHU) shows preference for A/T-rich region in the center of its DNA binding site.	4.4762e-40
NZ_CP050175.1\|WP_000863509.1\|1005285_1005633_-\|DUF1831-domain-containing-protein	gnl\|CDD\|370163	pfam08866, DUF1831, Putative amino acid metabolism. Solution of the structure of the Lactobacillus plantarum protein from this family has indicated a potential new fold with remote similarities to TBP-like (TATA-binding protein) structures. This similarity, in combination with genomic context analysis, leads us to propose an involvement in amino-acid metabolism. The potentially novel fold is an alpha + beta fold comprising two beta sheets packed against a single helix. The enzyme is present in the cytosol.	7.32693e-51
NZ_CP050175.1\|WP_001283813.1\|1006762_1007722_-\|ribose-phosphate-diphosphokinase	gnl\|CDD\|235039	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional.	0
NZ_CP050175.1\|WP_166735691.1\|1014203_1014902_+\|DUF1275-domain-containing-protein	gnl\|CDD\|226146	COG3619, COG3619, Predicted membrane protein [Function unknown].	4.6534e-63
NZ_CP050175.1\|WP_000451584.1\|1010941_1011916_+\|phosphate-acetyltransferase	gnl\|CDD\|236609	PRK09653, eutD, phosphotransacetylase.	0
NZ_CP050175.1\|WP_033705407.1\|1005637_1006753_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	9.67556e-173
NZ_CP050175.1\|WP_001210006.1\|1010001_1010898_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	8.56983e-100
NZ_CP050175.1\|WP_000799053.1\|1009186_1010005_+\|NAD-kinase	gnl\|CDD\|235317	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	9.83191e-171
NZ_CP050175.1\|WP_000587446.1\|1016920_1017838_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	7.0796e-130
NZ_CP050175.1\|WP_000681292.1\|1007834_1008404_-\|CYTH-domain-containing-protein	gnl\|CDD\|226601	COG4116, COG4116, Uncharacterized protein conserved in bacteria [Function unknown].	5.56902e-97
NZ_CP050175.1\|WP_000592059.1\|1017930_1018779_-\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	2.00085e-85
NZ_CP050175.1\|WP_000530084.1\|1020346_1021603_+\|ISL3-family-transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.90446e-124
NZ_CP050175.1\|WP_001819404.1\|1005134_1005278_-\|DUF4649-family-protein	gnl\|CDD\|339492	pfam15507, DUF4649, Domain of unknown function (DUF4649). This family of Firmicute sequences has members that are annotated as ribose-phosphate pyrophosphokinase; however there is no evidence for this attribution. Member proteins are all shorter than 100 residues in length.	3.85577e-18
NZ_CP050175.1\|WP_000109141.1\|1015089_1015404_+\|50S-ribosomal-protein-L21	gnl\|CDD\|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	6.1021e-45
NZ_CP050175.1\|WP_000613700.1\|1015419_1015764_+\|ribosomal-processing-cysteine-protease-Prp	gnl\|CDD\|225423	COG2868, COG2868, Predicted ribosomal protein [Translation, ribosomal structure and biogenesis].	4.93617e-39

>NZ_CP050175.1|WP_000451584.1|1010941_1011916_+|phosphate-acetyltransferase
MEVFESLKANLVGKNARIVLPEGEEPRILQATKRLVKETEVIPVLLGNPEKIKIYLEIEGIMDGYEVIDPQHYPQFEEMVSALVERRKGKMTEEDVRKVLVEDVNYFGVMLVYLGLVDGMVSGAIHSTASTVRPALQIIKTRPNVTRTSGAFLMVRGTERYLFGDCAININPDAEALAEIAINSAITAKMFGIEPKIAMLSYSTKGSGFGESVDKVVEATKIAHDLRPDLEIDGELQFDAAFVPETAALKAPGSTVAGQANVFIFPGIEAGNIGYKMAERLGGFAAVGPVLQGLNKPVNDLSRGCNADDVYKLTLITAAQAVHQ
>NZ_CP050175.1|WP_001210006.1|1010001_1010898_+|RluA-family-pseudouridine-synthase
MRFEFIADEHVKVKTFLKKHEVSKGLLAKIKFRGGAILVNNQPQNATYLLDVGDYVTIDIPAEKGFETLEAIELPLDILYEDDHFLVLNKPYGVASIPSVNHSNTIANFIKGYYVKQNYENQQVHIVTRLDRDTSGLMLFAKHGYAHARLDKQLQKKSIEKRYFALVKGDGHLEPEGEIIAPIARDEDSIITRRVAKGGKYAHTSYKIVASYGNIHLVDIRLHTGRTHQIRVHFSHIGFPLLGDDLYGGSLDDGIQRQALHCHYLSFYHPFLEQDLQLESPLPDDFSNLITQLSTNTL
>NZ_CP050175.1|WP_000799053.1|1009186_1010005_+|NAD-kinase
MKNTGKRIDLIANRKPQSQRVLYELRDRLKRNQFILNDTNPDIVISIGGDGMLLSAFHKYENQLDKVRFIGLHTGHLGFYTDYRDFELDKLVTNLQLDTGARVSYPVLNVKVFLENGEVKIFRALNEASIRRSDRTMVADIVINGVPFERFRGDGLTVSTPTGSTAYNKSLGGAVLHPTIEALQLTEIASLNNRVYRTLGSSIIVPKKDKIELIPTRNDYHTISVDNSVYSFRNIERIEYQIDHHKIHFVATPSHTSFWNRVKDAFIGEVDE
>NZ_CP050175.1|WP_000171676.1|1008531_1009203_+|GTP-pyrophosphokinase-family-protein
MTLEWEEFLDPYIQAVGELKIKLRGIRKQYRKQNKHSPIEFVTGRVKPIESIKEKMARRGITYATLEHDLQDIAGLRVMVQFVDDVKEVVDILHKRQDMRIIQERDYITHRKASGYRSYHVVVEYTVDTINGAKTILAEIQIRTLAMNFWATIEHSLNYKYQGDFPDEIKKRLEITARIAHQLDEEMGEIRDDIQEAQALFDPLSRKLNDGVGNSDDTDEEYR
>NZ_CP050175.1|WP_000681292.1|1007834_1008404_-|CYTH-domain-containing-protein
MKHLEIELKTLLKKDEYNRLKDQFTGVTPVLQTNYYIDTPDFELREKKVAMRIRTFEDWAELTLKVPQSVGNMEYNQKLQLKDAENYLSKEELPQGLVLDELAKHGIQSKNWQVLGCLTTLRYEMKTAIGLMALDQSRYFDITDYELELEVENHEQGKQDFRQFLEKNQISYQKAPSKLVRFVKSMKNS
>NZ_CP050175.1|WP_001283813.1|1006762_1007722_-|ribose-phosphate-diphosphokinase
MSDRKNMKLFALNSNQEIAQKIAQAVGVPLGKLSSRQFSDGEIQVNIEESVRGYDVYIIQSTSFPVNNHLMELLIMVDACVRASAHSINVVLPYFGYARQDRIACPREPLTAKLVANMLVKAGVDRILTLDLHAVQVQGFFDIPVDNLFTVPLFAKHYCDKGLLGSDVVVVSPKNSGVKRARSLAEYLDAPIAIIDYPQDDATRNEGYIIGDVEGKKAILIDDILNTGRTFSEASKIVEREGATEIYAVSSHGLFVEGAAELLDNTNIKEILVTDSVATKEKTPKNVCYITASELIGDAIVRIHERKPVSPLFAYNKKK
>NZ_CP050175.1|WP_033705407.1|1005637_1006753_-|cysteine-desulfurase
MIYLDNAATTPMSAVAISAMTKVMQETHGNPSSIHGHGRQAGKLLREARQELAQLLRTKPQHIFFTSGGTEGNNTTIIGYCLRHQEQGKHIITTAIEHHAVLETIDYLVQHFGFEATIIQPENQEITAQQIQKALRDDTILVSTMFANNETGNLLPIAEIGQILKQHPAAYHVDAVQAIGKIPIHSEELGIDFLTASAHKFHGPKGIGFLYASSMDFDSYLHGGDQEQKKRAGTENLPAIVGMVAALKEDLEKQEEHFQYVQNLETAFLAELEGIQYYLNRGKHHLPYVLNIGFPGQKNDLLLLRLDLAGISISTGSACTAGVVQSSHVLEAMYGANSERLKESLRISLSPQNTVEDLQTLAKTLKEIIGG
>NZ_CP050175.1|WP_000863509.1|1005285_1005633_-|DUF1831-domain-containing-protein
MAFEKIIQLKNCRYDYTLSPSVKKFTLKDNTFFETKVGNYELTRLLEKVPNSGEGFQLKIIINKELTGAKINITDKFGLRLVDIFKSEDHHIHQEKFYFLMDSLVERGVFTKSER
>NZ_CP050175.1|WP_001819404.1|1005134_1005278_-|DUF4649-family-protein
MFELTYKDCYHVERTLKYEDHEALMLTLSGCVTLPDTLYVTSLTFRG
>NZ_CP050175.1|WP_000653403.1|1004338_1004980_-|redox-sensing-transcriptional-repressor-Rex
MKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGELGRRGFGYDVKKLMTFFADLLNDNSITNVMLVGIGNMGHALLHYRFHERNKMKIIMAFDLDDHPEVGTQTPDGIPIYGISQIKDKIKDADVKTAILTVPSVKSQEVANLLVDAGVKGILSFSPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED
>NZ_CP050175.1|WP_000981526.1|1013502_1013802_-|YbaB/EbfC-family-nucleoid-associated-protein
MMNMQNMMRQAQKLQKQMEQSQAELAAMQFVGKSAQDLVQATLTGDKKVVSIDFNPAVVDPEDLETLSDMTVQAINSALEQIDETTKKKLGAFAGKLPF
>NZ_CP050175.1|WP_166735691.1|1014203_1014902_+|DUF1275-domain-containing-protein
MGGKMRLLPIRKISRQSKRLALFLTFCAGYVDAYTFIVRGNTLVAGQTGNVVFLSVELIKNNVSDVRDKVLTLLAFMMGVFLLTIYKEKLRIVKKPILSLIPLAILSIIIAFVPQTVDNIYLVPPLAFCMGLVTTAFGEVSGIAYNNAFMTGNIKRTMLAFGDYFRTKHTPFLREGIIFVSLLSSFVLGVVFSAYLTIFYHEKTILGVPIMMSVFYLSMLFASWQKKVKEKA
>NZ_CP050175.1|WP_000109141.1|1015089_1015404_+|50S-ribosomal-protein-L21
MSTYAIIKTGGKQVKVEVGQAVYVEKLNVEAGQEVTFNEVVLVGGENTVVGTPLVAGATVVGTVEKQGKQKKVVTYKYKPKKGSHRKQGHRQPYTKVVINAINA
>NZ_CP050175.1|WP_000613700.1|1015419_1015764_+|ribosomal-processing-cysteine-protease-Prp
MIQAVFERAEDGELRSAEITGHAESGEYGLDVVCASVSTLAINFINSIEKFAGYEPILELNEDEGGYLMVEIPKDLPSHQREMTQLFFESFFLGMANLSENYSEFVQTRVITEN
>NZ_CP050175.1|WP_000916509.1|1015780_1016074_+|50S-ribosomal-protein-L27
MLKMTLNNLQLFAHKKGGGSTSNGRDSQAKRLGAKAADGQTVTGGSILYRQRGTHIYPGVNVGRGGDDTLFAKVEGVVRFERKGRDKKQVSVYPIAK
>NZ_CP050175.1|WP_000587446.1|1016920_1017838_+|bifunctional-riboflavin-kinase/FAD-synthetase
MIITIPIKNQKDIGTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGSDKKTAEDLKDYFDGEVIIVPPVEDEKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQKYRAMASVGKNVTFDGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVEQLKADEEVTRNWS
>NZ_CP050175.1|WP_000592059.1|1017930_1018779_-|YitT-family-protein
MIKKIYPIFTILLGAAIYAFGLTYFVVPHHLFEGGATGITLITFYLFKIPVSLMNLLINIPLFILAWKIFGAKSLYSSLLGTLALSGWLAFFEHIPLHIDLQGDLLITALIAGILLGIGLGIIFNAGGTTGGTDILARILNKYTHISIGKLLFILDFCILMLILLIFKDLRLVSYTLLFDFIVSRVIDLIGEGGYAGKGFMIITKRPDQLAKAINDDLGRGVTFISGQGYYSKENLKIIYCIVGRNEIVKTKEMIHRIDPQAFITITEAHEILGEGFTFEKE
>NZ_CP050175.1|WP_000161388.1|1018920_1019760_+|DegV-family-protein
MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLPKTSQPPVGVFAEIFEDLCKDGGHILAIHMSHALSGTVEAARQGASLSTADVTVVDSSFTDQALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVSTLENLVKGGRISRVTGLLSSLLNIRVVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKEMKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRYHS
>NZ_CP050175.1|WP_001284639.1|1019866_1020142_+|HU-family-DNA-binding-protein
MANKQDLIAKVAEATELTKKDSAAAVEAVFAAVADYLAAGEKVQLIGFGNFEVRERAERKGRNPQTGKEMTIAASKVPAFKAGKALKDAVK
>NZ_CP050175.1|WP_000530084.1|1020346_1021603_+|ISL3-family-transposase
MGQLHFITKLLDIKDTNIQIIDVVNRDSHKEIIAKLDYDAPSCPDCGSLMKKYDFQKPSKIPYLETTGMPSRILLRKRRFKCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLAISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYAFTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHLSRAMSRFRVQIMNQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILDKILSYSEDLKHHYQIYQLLLFHFQNKDPEKFFGLIEDNLKQVHPLFQTVFKTFLKNKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSQA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP050175_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050175_3

1074410-1074489

Orphan

Consensus_repeat	Method
GGGCCAAGCGGTGGCGGACACCAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050175_3

>merge|NZ_CP050175|3|1074410-1074489|CRISPRCasFinder
GGGCCAAGCGGTGGCGGACACCAGAACAAAATCCGATAGCAATCTTGGACGTACGGGCCAAGCGGTGGCAGACACCAGAA

>NZ_CP050175|3|3|1074410-1074489|CRISPRCasFinder
GGGCCAAGCGGTGGCGGACACCAGAA	CAAAATCCGATAGCAATCTTGGACGTAC
GGGCCAAGCGGTGGCAGACACCAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050175.1\|WP_033705459.1\|1065266_1065755_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050175.1\|WP_000492401.1\|1063858_1064695_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP050175.1\|WP_001814874.1\|1078653_1078737_+\|23S-rRNA-methyltransferase-attenuation-leader-peptide	unknown	unknown	gnl\|CDD\|368836
NZ_CP050175.1\|WP_001038795.1\|1078861_1079599_+\|23S-rRNA-(adenine(2058)-N(6))-methyltransferase-Erm(B)	unknown	unknown	gnl\|CDD\|366074
NZ_CP050175.1\|WP_000184454.1\|1069171_1071487_+\|ATPase-AAA	unknown	unknown	gnl\|CDD\|274279
NZ_CP050175.1\|WP_001097590.1\|1068819_1069179_+\|PrgI-family-protein	unknown	unknown	gnl\|CDD\|378907
NZ_CP050175.1\|WP_001841744.1\|1065754_1067632_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|367119
NZ_CP050175.1\|WP_041974923.1\|1063214_1063859_+\|type-IV-toxin-antitoxin-system-AbiEi-family-antitoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|379128
NZ_CP050175.1\|WP_001054256.1\|1067911_1068766_+\|conjugal-transfer-protein-TrbL	unknown	unknown	unknown
NZ_CP050175.1\|WP_001841741.1\|1077186_1078605_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|367101
NZ_CP050175.1\|WP_000813488.1\|1075623_1077009_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|224588
NZ_CP050175.1\|WP_001009056.1\|1081282_1081504_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050175.1\|WP_000342539.1\|1081620_1082118_+\|antirestriction-protein-ArdA	unknown	unknown	gnl\|CDD\|377800
NZ_CP050175.1\|WP_000985015.1\|1075208_1075595_+\|YdcP-family-protein	unknown	unknown	gnl\|CDD\|368761
NZ_CP050175.1\|WP_000869754.1\|1064977_1065265_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050175.1\|WP_000627865.1\|1067652_1067895_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050175.1\|WP_000506270.1\|1082092_1082599_+\|conjugal-transfer-protein	unknown	unknown	gnl\|CDD\|372239
NZ_CP050175.1\|WP_000879507.1\|1077011_1077164_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050175.1\|WP_033705457.1\|1071498_1074312_+\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|380090
NZ_CP050175.1\|WP_000420682.1\|1074878_1075193_+\|YdcP-family-protein	unknown	unknown	gnl\|CDD\|368761

Protein	Function_ID	Function_description	E-value
NZ_CP050175.1\|WP_000492401.1\|1063858_1064695_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	3.10204e-26
NZ_CP050175.1\|WP_000506270.1\|1082092_1082599_+\|conjugal-transfer-protein	gnl\|CDD\|372239	pfam12648, TcpE, TcpE family. This family of proteins includes TcpE a conjugative transposon membrane protein.This family of proteins is found in bacteria. Proteins in this family are typically between 122 and 168 amino acids in length.	4.8203e-34
NZ_CP050175.1\|WP_001841741.1\|1077186_1078605_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|367101	pfam02486, Rep_trans, Replication initiation factor. Plasmid replication is initiated by the replication initiation factor (REP). This family represents a probable topoisomerase that makes a sequence-specific single-stranded nick in the plasmid DNA at the origin of replication. Human proteins also belong to this family, including myelin transcription factor 2 and cerebrin-50.	9.47045e-85
NZ_CP050175.1\|WP_000184454.1\|1069171_1071487_+\|ATPase-AAA	gnl\|CDD\|274279	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC. The protein family described here is common among the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The protein conyains the Walker A and B motifs and so is a putative nucleotide triphosphatase.	2.08802e-14
NZ_CP050175.1\|WP_001097590.1\|1068819_1069179_+\|PrgI-family-protein	gnl\|CDD\|378907	pfam12666, PrgI, PrgI family protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 116 and 146 amino acids in length. This protein is found in an operon that is part of a Type IV secretion system.	8.68196e-15
NZ_CP050175.1\|WP_001841744.1\|1065754_1067632_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|367119	pfam02534, T4SS-DNA_transf, Type IV secretory system Conjugative DNA transfer. These proteins contain a P-loop and walker-B site for nucleotide binding. TraG is essential for DNA transfer in bacterial conjugation. These proteins are thought to mediate interactions between the DNA-processing (Dtr) and the mating pair formation (Mpf) systems. The C-terminus of this domain interacts with the relaxosome component TraM via the latter's tetramerisation domain. TraD is a hexameric ring ATPase that forms the cytoplasmic face of the conjugative pore. The family contains a number of different DNA transfer proteins.	1.95671e-57
NZ_CP050175.1\|WP_041974923.1\|1063214_1063859_+\|type-IV-toxin-antitoxin-system-AbiEi-family-antitoxin-domain-containing-protein	gnl\|CDD\|379128	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin. AbiEi_4 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	0.00642242
NZ_CP050175.1\|WP_001814874.1\|1078653_1078737_+\|23S-rRNA-methyltransferase-attenuation-leader-peptide	gnl\|CDD\|368836	pfam06308, ErmC, 23S rRNA methylase leader peptide (ErmC). This family consists of several very short bacterial 23S rRNA methylase leader peptide (ErmC) sequences. ermC confers resistance to macrolide-lincosamide streptogramin B antibiotics by specifying a ribosomal RNA methylase, which results in decreased ribosomal affinity for these antibiotics. ermC expression is induced by exposure to erythromycin.	0.00200655
NZ_CP050175.1\|WP_000813488.1\|1075623_1077009_+\|DNA-translocase-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	4.90599e-31
NZ_CP050175.1\|WP_000342539.1\|1081620_1082118_+\|antirestriction-protein-ArdA	gnl\|CDD\|377800	pfam07275, ArdA, Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	2.59639e-45
NZ_CP050175.1\|WP_000985015.1\|1075208_1075595_+\|YdcP-family-protein	gnl\|CDD\|368761	pfam06125, DUF961, Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	9.54557e-44
NZ_CP050175.1\|WP_001038795.1\|1078861_1079599_+\|23S-rRNA-(adenine(2058)-N(6))-methyltransferase-Erm(B)	gnl\|CDD\|366074	pfam00398, RrnaAD, Ribosomal RNA adenine dimethylase.	3.23117e-86
NZ_CP050175.1\|WP_033705457.1\|1071498_1074312_+\|CHAP-domain-containing-protein	gnl\|CDD\|380090	pfam18013, Phage_lysozyme2, Phage tail lysozyme. This domain has a lysozyme like fold. It is found in the tail protein of various phages probably giving them the ability to degrade the host cell wall peptidoglycan layer.	8.34124e-37
NZ_CP050175.1\|WP_000420682.1\|1074878_1075193_+\|YdcP-family-protein	gnl\|CDD\|368761	pfam06125, DUF961, Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	7.00664e-46

>NZ_CP050175.1|WP_033705457.1|1071498_1074312_+|CHAP-domain-containing-protein
MKDKREIIRARKAFRRSLKDEKKFLKQGKKEVRKQKKDSAGLDEKRWKKEIKEKLEEMREASKERVRQANEDYNHILQNSPPSLLNRKELRDRRLPHARKRLKIAKKQFREAKVEAKEERKESRKERKINQKFLYGQESKQKSNFFFQGKSLEELKAKKEVKAAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLEGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATGRFTKKRLTNTKERYHHFKDGKGWKLAKDKPSSFKNRFRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPVTWIVGGIVFLLLLIMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELHKPVHLFSSETYKDYLSTLWHDLNDGEDLKSMQDLYESPKYKLSKDDQEEIKELKEEGVYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDGKPTLQEYILLEAKVHQTIVAPMDGVVSLDGDDVILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVSYQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYEFLKSQGASPQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSSWDDESWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYARTQNKKWYDLDLQLDFMLHGDSPYYQSWLKDFFKNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRGDLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATASSLGGETGSTPRAGAIVSFVGGTHGTPASYGHVAFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK
>NZ_CP050175.1|WP_000184454.1|1069171_1071487_+|ATPase-AAA
MTNQKEVVKGKKEEVLPSTANSLAYQALYQNGLMQVKEDYFSQSYLLGDVNYQTVGLEDKGAIIEKYSDLINSLDDQTNFQLTIFNKRLNLEKFRQSVLYEEKEDGYDSYRKELNRMMNQNLDSGENNFSAVKLISFGRKDSNPKQAYRSLSQIGEYFKSGFSEIDARFESLAGEERVNLLADMLRGEHHLPFSYRDLTRSGQTTRHFIAPNLLDFKNKNYLQINDRLLQIVYVRDYGMELGDQFIRDLMQGDLELIVSLHAQSSTKADAMKKLRTKKTLMESQKIGEQQKLARTGIYLEKVGHVLESNIDEAEELLKTMTETGDKLFQTVFLIGVFGQDEEELKQALDTIQQVAGSNDLMIDKLPYMQEAAFNSLLPFGCDFLEGVSRSLLTSNIAVNSPWTSVDLQDRSGKYYGINQISSNIITIDRSLLNTPSGLILGTSGAGKGMATKHEIITTKIKESGENTEIIIVDPEAEYSVIGRAFGGEMIDIAPDSQTYLNVLDLSEENMDEDPVKVKSEFLLSFIGKLLDRKMDGREKSIIDRVTRLTYQSFKEPSLEEWVFVLSQQPEEEAQNLALDMELYVEGSLDIFSHKTNIQTGSNFLIYNVKKLGDELKQIALMVVFDQIWNRVVRNQKLGKKTWIYFDEMQLLLLDKYASDFFFKLWSRVRKYGASPTGITQNVETLLLDPNGRRIIANSEFMILLKQAKNDREELVQLLGLSKELEKYLVNPEKGAGLIKAGSVVVPFKNKIPQGTQLFDIMSTDPDKMASN
>NZ_CP050175.1|WP_001097590.1|1068819_1069179_+|PrgI-family-protein
MNTRVFKDISKYQHRAWLGFTTRQIIFVLPAFIVTIIVLGLNLFFWQFGDWFVYGFVFAFTIPLMLFGVYKPNDLYFEHYLKYRLHFELTVPLRTITGKKGPEYDKKIKYIKETENFND
>NZ_CP050175.1|WP_001054256.1|1067911_1068766_+|conjugal-transfer-protein-TrbL
MNLSLVSPFVYLASEKISAENLFEGFNVDLQSTVDLIKSLSSYNPTVWTYMSSITKSVMQPLGVAILSVVLILEFSKMAKKIANSGGAMTFEALAPMLISYIMVAVVITNTTVIVEAIIGIASHAIEQVASIVAHGGAKYDTISGLKGSGFIGRMIVGFFALLIWLVRIVSAAMVNLLVSIRFIQLYLMIPFAPLTIPTFLSDEWKSIGIGYLKNIMVYAVQGVLIFLIVSLVPLFESAGKIAVSNGAGVLQSLAIMFGSLIQAILLIIALVGSQRTARSILGM
>NZ_CP050175.1|WP_000627865.1|1067652_1067895_+|hypothetical-protein
MITHFKGFVYGVDASAMFAQAMSLLQKGLIAVGAFLVVVGIVNLATNIKDGGPGVRNAILEIVGGVMVGAAGAFVTQISI
>NZ_CP050175.1|WP_001841744.1|1065754_1067632_+|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MYSGKKFLLFSLLGILLGYLFHRLTLLYDSYTGNSLDKWTHLLMEGQDEVLQSPWNVSFTGKSSAFFLLGFVMMLLVYLYLETGKKQYREGVEYGSARFGTLKEKKLFYGKEFSHDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNLIQMNSSNIVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWDEASMTLVRALASYLVDFYNPPKTREQLIEESRLSQKEYQNLLKRQKKEVEERKKRGRYPSFAEISKLIKHLSKGENQEKSVLEILFENYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVMDLTKRDTLDMKTWGKEKSMVYLVIPDNDSTFRFLSALFFSTVFQTLTRQADIDFKGQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEVGNMKRHECLVRIANMPVFKSKKYNSTKHPNWKYLANQETDERWWNYQINPLNRSQENHLEGLRIRDLTFESSLK
>NZ_CP050175.1|WP_033705459.1|1065266_1065755_+|hypothetical-protein
MSSEQQERMAVQYAERSLLFTVISLLKILEWSRRQALAQDSAYKIGVQKLEELLQSPYAIDTINLKKDFLDKPIDIEKFKAFLEKEEIPLAIAWQGDSLHFYTKDRSILDNHLDHLLEKMVNDPEKLADFTMDKSLDDAIDEAKSQITFRQEGAVKQKEMVR
>NZ_CP050175.1|WP_000869754.1|1064977_1065265_+|hypothetical-protein
MKVVNLYDLKQMGNKGGCTIQLIHHFPFGMGLGHLKKDYIEFKRVGIFDGKAVEVTLREPYSRDLLQVVKSIKQRQKLIAYRYKEGKLLFVKKEV
>NZ_CP050175.1|WP_000492401.1|1063858_1064695_+|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MFSNANSFKAKIKNISKDKGIPAQQVQQHYLIEQVLKMISTSPYRDSFIVKGGYLIGQMIGLDKRTTMDLDVTLKGTEMSRENLIHIFEEILCSKTDGFSFSVDKLEPIRQDDEYGGFSLKLNATFDTLKEVVFIDITTGDKITPREITYSMTSIFTNESIKIWTYNLETVLAEKLETIISRGLASTRPRDRYDLFTLYKLRKEEINLEVLKNALENTAEKRESKDTIYNWEEQVRGIEISDYQKELWIRYQRQFKYAKDISFDNSVQVIKEIMQQIF
>NZ_CP050175.1|WP_041974923.1|1063214_1063859_+|type-IV-toxin-antitoxin-system-AbiEi-family-antitoxin-domain-containing-protein
MLTYIEDVSILFLRKENDMVDKREKLMNYFNQYGFLTFKQVIDENLHYKTLLKMITEGKIDAEEKGLYRLPDIYLDEWFVLQYRFPKGIYSLETALWLHGLSLTIPFNMTMSFPYGTNTKNIKEADICPIILRSHYSEGIIEIERLPGQFIKVYEVERVLVECLRPVHQVDLQIIAPAFKKYFQQNQIHLHKLFYYAQLFKVTDKLQSYTEVLS
>NZ_CP050175.1|WP_000420682.1|1074878_1075193_+|YdcP-family-protein
MELKFVIPNMEKTFGNLEFAGEDKVVQRRINGRLTVLSRSYNLYSDVQRADDIVVVLPAEAGEKHFGFEERVKLVNPRITAEGYKIGTRGFTNYLLHADDMIKE
>NZ_CP050175.1|WP_000985015.1|1075208_1075595_+|YdcP-family-protein
MMRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKKEPTQDK
>NZ_CP050175.1|WP_000813488.1|1075623_1077009_+|DNA-translocase-FtsK
MKQRGKRIRPSGKDLVFHFTIASLLPVFLLVVGLFHVKTIQQINWQDFNLSQADKIDIPYLIISFSVAILICLLVAFVFKRVRYDTVKQLYHRQKLAKMILENKWYESEQVKTEGFFKDSAGRTKEKITYFPKMYYRLKNGLIQIRVEITLGKYQDQLLHLEKKLESGLYCELTDKELKDSYVEYTLLYDTIASRISIDEVEAKDGKLRLMKNVWWEYDKLPHMLIAGGTGGGKTYFILTLIEALLHTDSKLYILDPKNADLADLGSVMANVYYRKEDLLSCIETFYEEMMKRSEEMKQMKNYKTGKNYAYLGLPAHFLIFDEYVAFMEMLGTKENTAVMNKLKQIVMLGRQAGFFLILACQRPDAKYLGDGIRDQFNFRVALGRMSEMGYGMMFGSDVQKDFFLKRIKGRGYVDVGTSVISEFYTPLVPKGYDFLEEIKKLSNSRQSTQATCEAEVAGVD
>NZ_CP050175.1|WP_000879507.1|1077011_1077164_+|hypothetical-protein
MLAGVAIATPALNPPYLTGGYKSTGNSQKNIRKSFGYKGFTKFQRMSNGL
>NZ_CP050175.1|WP_001841741.1|1077186_1078605_+|helix-turn-helix-domain-containing-protein
MEGFLLNEQTWLQHLKEKRLAYGLSQNRLAVATGITRQYLSDIETGKVKPSEDLQQSLWEALERFNPDAPLEMLFDYVRIRFPTTDVQHVVENILQLKLSYFLHEDYGFYSYSEHYALGDIFVLCSHELDKGVLVELKGRGCRQFESYLLAQQRSWYEFFMDALVAGGVMKRLDLAINDKTGILNIPVLTEKCRQEECISVFRSFKSYRSGELVRKDEKECMGNTLYIGSLQSEVYFCIYEKDYEQYKKNDIPIEDAEVKNRFEIRLKNERAYYAVRDLLVYDNPEHTAFKIINRYIRFVDKDDSKPRSDWKLNEEWAWFIGNNRERLKLTTKPEPYSFQRTLNWLSHQVAPTLKVAIKLDEINQTQVVKDILDHAKLTDRHKQILKQQSVKEQDVITTKKGYLSTIPVDRYPKKDIMGDKTVRVRADLHHIIKIETAKNGGNVKEVMEIRLRSKLKSVLIVHYLKILYNRN
>NZ_CP050175.1|WP_001814874.1|1078653_1078737_+|23S-rRNA-methyltransferase-attenuation-leader-peptide
MLVFQMRNVDKTSTVLKQTKNSDYADK
>NZ_CP050175.1|WP_001038795.1|1078861_1079599_+|23S-rRNA-(adenine(2058)-N(6))-methyltransferase-Erm(B)
MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNNLSTITYEQVLSIFNSYLLFNGRK
>NZ_CP050175.1|WP_001009056.1|1081282_1081504_+|hypothetical-protein
MNFGQNLYNWFLSNAQSLVLLAIVVIGLYLGFKREFSKLIGFLIIAIIAVGLVFNAAGVKDILLELFNRIIGA
>NZ_CP050175.1|WP_000342539.1|1081620_1082118_+|antirestriction-protein-ArdA
MDDMQVYIANLGKYNEGELVGAWFTFPIDFEEVKEKIGLNDEYEEYAIHDYELPFTVDEYTSIGELNRLWEMVSELPEELQSELSALLTHFSSIEELSEHQEDIIIHSDCDDMYDVARYYIEETGALGEVPASLQNYIDYQAYGRDLDLSGTFISTNHGIFEIVY
>NZ_CP050175.1|WP_000506270.1|1082092_1082599_+|conjugal-transfer-protein
MGFLKSSIKSVGTLLLADFLFYGVAQSATPIFYERIDYMKKIRSYTSIWSVEKVLYSINDFRLPFPITFTQMTWFVVSLFAVMILGNLPPLSMIEGAFLKYFGIPVAFTWFMSTKTFDGKKPYGFLKSVIAYALRPKLTYAGKKVTLGRNQPQEAITAVRSEFYGISN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP050175_2	2.1\|1013373\|38\|NZ_CP050175\|CRISPRCasFinder	1013373-1013410	38	KY065475	Streptococcus phage IPP35, complete genome	23044-23081	4	0.895
NZ_CP050175_2	2.1\|1013373\|38\|NZ_CP050175\|CRISPRCasFinder	1013373-1013410	38	MK448453	Streptococcus satellite phage Javan360, complete genome	13985-14022	5	0.868

1. spacer 2.1|1013373|38|NZ_CP050175|CRISPRCasFinder matches to KY065475 (Streptococcus phage IPP35, complete genome) position: , mismatch: 4, identity: 0.895

ccctttttttctacaataaaataggctccataatatct	CRISPR spacer
gactttttttctacacaaaaataggctccataatatct	Protospacer
  *************  *********************

2. spacer 2.1|1013373|38|NZ_CP050175|CRISPRCasFinder matches to MK448453 (Streptococcus satellite phage Javan360, complete genome) position: , mismatch: 5, identity: 0.868

ccctttttttctacaataaaataggctccataatatct	CRISPR spacer
gactttttttctacaacaaaataggctccataatattc	Protospacer
  **************.*******************..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

44689 : 56000

Synechococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033707870.1\|44689_46843_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	5.5e-46	28.2
WP_033707869.1\|46855_48205_+	HlyD family secretion protein	NA	NA	NA	NA
WP_000043314.1\|48374_49082_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D8KNF0	Synechococcus_phage	1.8e-41	39.2
WP_166735646.1\|49138_52864_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	9.6e-38	25.9
WP_000220633.1\|52956_54399_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.7e-55	35.1
WP_166735647.1\|54435_55458_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	2.1e-64	43.9
WP_000717506.1\|55454_56000_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.4e-24	35.0

DBSCAN-SWA_2

107320 : 131982

Planktothrix_phage(50.0%)

bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001230166.1\|107320_107608_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_000724268.1\|107659_109768_+\|bacteriocin	bacteriocin-associated integral membrane family protein	NA	NA	NA	NA
WP_000571330.1\|109764_110406_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-23	34.8
WP_001038474.1\|110612_111419_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_000031929.1\|111435_111663_+	argininosuccinate synthase	NA	NA	NA	NA
WP_000252931.1\|111693_111855_+	argininosuccinate synthase	NA	NA	NA	NA
WP_001268152.1\|112040_112904_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000424429.1\|113540_113912_+\|bacteriocin	SPH_0218 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000909533.1\|113919_114132_+	hypothetical protein	NA	NA	NA	NA
WP_000424479.1\|114547_114910_+	hypothetical protein	NA	NA	NA	NA
WP_000356083.1\|114890_115136_+	hypothetical protein	NA	NA	NA	NA
WP_001819309.1\|115292_116351_+	hypothetical protein	NA	NA	NA	NA
WP_001820522.1\|116665_117643_+	hypothetical protein	NA	NA	NA	NA
WP_000424474.1\|118113_118488_+\|bacteriocin	SPH_0224 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000511669.1\|118494_118677_+	hypothetical protein	NA	NA	NA	NA
WP_000619762.1\|118695_119598_+	hypothetical protein	NA	NA	NA	NA
WP_000424436.1\|119653_120007_+	hypothetical protein	NA	NA	NA	NA
WP_050231638.1\|120003_120732_+	hypothetical protein	NA	NA	NA	NA
WP_000770312.1\|121864_122104_+	hypothetical protein	NA	NA	NA	NA
WP_001810010.1\|122088_122367_+	hypothetical protein	M1Q0Z8	Streptococcus_phage	1.1e-20	50.5
WP_166735651.1\|122652_124491_+	pneumococcal surface protein A	NA	NA	NA	NA
WP_050218383.1\|124890_126012_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000193621.1\|126152_126608_+	NUDIX hydrolase	NA	NA	NA	NA
WP_050218384.1\|126617_128531_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_000331980.1\|128910_130590_-	ribonuclease J	NA	NA	NA	NA
WP_000639577.1\|130591_130825_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_000974047.1\|131642_131795_-\|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	NA	NA	NA	NA
WP_000180805.1\|131796_131982_-\|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	NA	NA	NA	NA

DBSCAN-SWA_3

318602 : 376647

Streptococcus_phage(25.0%)

transposase,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033707917.1\|318602_320708_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	3.4e-117	37.7
WP_000032550.1\|321003_321486_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_000743611.1\|321580_323065_-	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_033705611.1\|323217_324825_+	alpha-glucosidase	NA	NA	NA	NA
WP_001022231.1\|324983_325157_+	hypothetical protein	NA	NA	NA	NA
WP_033705610.1\|325893_327339_+	LCP family protein	A0A1X9I5X1	Streptococcus_phage	2.6e-132	59.6
WP_033705609.1\|327340_328072_+	tyrosine protein phosphatase	NA	NA	NA	NA
WP_033705608.1\|328080_328773_+	capsular biosynthesis protein CpsC	A0A1X9I5E1	Streptococcus_phage	1.8e-62	56.8
WP_001142528.1\|328782_329457_+	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	8.5e-78	63.4
WP_000286441.1\|329803_330403_+	sugar transferase	NA	NA	NA	NA
WP_001813070.1\|330407_331634_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_000866355.1\|331630_332800_+	glycosyltransferase	NA	NA	NA	NA
WP_000977706.1\|332837_334049_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_000761414.1\|334023_335100_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_033705606.1\|335101_336280_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_033705605.1\|336321_337509_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_000091999.1\|337505_339050_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_000611245.1\|339042_340266_+	nucleotide sugar dehydrogenase	M1HNJ7	Paramecium_bursaria_Chlorella_virus	9.8e-24	28.0
WP_000725279.1\|340294_341392_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	5.7e-31	30.5
WP_033705604.1\|341395_342451_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	2.6e-33	33.0
WP_000594467.1\|342550_343780_+	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA
WP_033705603.1\|343780_344965_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SJE0	Klosneuvirus	1.2e-103	51.3
WP_001811052.1\|345327_345486_-	hypothetical protein	NA	NA	NA	NA
WP_033705371.1\|346796_347120_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_000941204.1\|347100_347286_-	hypothetical protein	NA	NA	NA	NA
WP_033705368.1\|348424_350407_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_166735663.1\|350707_355996_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_033705365.1\|356162_358322_-	penicillin-binding protein 1A	NA	NA	NA	NA
WP_000248787.1\|358318_358915_-	Holliday junction resolvase RecU	A0A1L2JY30	Aeribacillus_phage	8.7e-18	33.9
WP_000179549.1\|358980_359508_+	DUF1273 domain-containing protein	NA	NA	NA	NA
WP_000146522.1\|359577_359907_+	cell division regulator GpsB	NA	NA	NA	NA
WP_033705364.1\|360392_361550_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_000039303.1\|361561_362956_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA
WP_000158781.1\|363031_364456_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	1.6e-41	29.6
WP_033705362.1\|364467_365157_+	response regulator transcription factor	NA	NA	NA	NA
WP_033705361.1\|365254_366271_+\|holin	choline-binding protein CbpC	NA	NA	NA	NA
WP_000163323.1\|366392_367271_+	mevalonate kinase	NA	NA	NA	NA
WP_000373457.1\|367252_368206_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_033705360.1\|368192_369200_+	phosphomevalonate kinase	NA	NA	NA	NA
WP_000210623.1\|369183_370194_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_001224637.1\|370271_370970_+	cell wall-active antibiotics response protein	NA	NA	NA	NA
WP_000743677.1\|370966_371962_+	sensor histidine kinase	NA	NA	NA	NA
WP_000698434.1\|371975_372608_+	response regulator transcription factor	NA	NA	NA	NA
WP_078102538.1\|372771_373086_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_001823720.1\|373104_373377_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_000754501.1\|373526_373766_+	hypothetical protein	NA	NA	NA	NA
WP_033705358.1\|373846_374668_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_023396156.1\|374686_375709_+\|holin	choline-binding protein CbpF	NA	NA	NA	NA
WP_033705326.1\|375836_376325_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	5.6e-39	51.6
WP_166735642.1\|376338_376647_-\|transposase	transposase	A0A1B1P773	Bacillus_phage	1.4e-14	51.9

DBSCAN-SWA_4

459224 : 506743

Bacillus_phage(22.22%)

bacteriocin,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000181374.1\|459224_459728_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_000185835.1\|460180_460744_+	ECF transporter S component	NA	NA	NA	NA
WP_033707959.1\|460733_461384_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000867292.1\|461410_461827_+	hypothetical protein	NA	NA	NA	NA
WP_000418402.1\|462163_462751_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_033705412.1\|463140_464748_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.7e-140	46.8
WP_033705411.1\|465306_466938_-	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_078376001.1\|467230_472210_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_001096742.1\|472299_473496_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_000119905.1\|473631_474159_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_000659547.1\|474235_474592_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_166735666.1\|474628_475975_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_001808898.1\|476070_476190_-	hypothetical protein	NA	NA	NA	NA
WP_000410533.1\|476154_476304_+	hypothetical protein	NA	NA	NA	NA
WP_166735740.1\|476734_478054_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_000651177.1\|478110_478908_+	tyrosine-type DNA invertase PsrA	A0A0H4TI16	Erysipelothrix_phage	1.3e-21	28.7
WP_015545687.1\|478918_479521_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_166735667.1\|479468_481037_-	restriction endonuclease subunit S	A0A1V0SLK8	Klosneuvirus	1.0e-12	25.6
WP_033707995.1\|481036_482500_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_000229090.1\|482512_484846_-	DEAD/DEAH box helicase family protein	Q5YA94	Bacillus_phage	5.8e-25	27.9
WP_001088689.1\|485453_485963_+	DUF2812 domain-containing protein	NA	NA	NA	NA
WP_000255779.1\|486126_487161_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_000046031.1\|487187_487712_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_000034662.1\|488191_490015_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.3e-133	47.2
WP_000343113.1\|490025_490430_+	hypothetical protein	NA	NA	NA	NA
WP_001066295.1\|490773_491910_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	2.4e-24	31.3
WP_001808905.1\|492243_492438_-	hypothetical protein	NA	NA	NA	NA
WP_000777753.1\|492599_492887_-	hypothetical protein	NA	NA	NA	NA
WP_001278301.1\|492896_493307_-	HIT family protein	B5LJ12	Mycobacterium_phage	3.4e-05	31.6
WP_000889921.1\|493374_494106_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.3e-25	28.6
WP_000653771.1\|494102_495152_+	multidrug ABC transporter permease	NA	NA	NA	NA
WP_000132572.1\|495319_495649_-	hypothetical protein	NA	NA	NA	NA
WP_000682133.1\|495925_496264_+	response regulator transcription factor	NA	NA	NA	NA
WP_001219122.1\|496268_497006_+	response regulator transcription factor	NA	NA	NA	NA
WP_000275285.1\|497018_498359_+	sensor histidine kinase	NA	NA	NA	NA
WP_000358814.1\|498403_498559_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA
WP_033705510.1\|498615_499977_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_078142245.1\|499987_501631_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	4.1e-41	27.2
WP_000205166.1\|501557_502145_-	peptidase C39	NA	NA	NA	NA
WP_033705509.1\|502483_502738_+\|bacteriocin	two-peptide bacteriocin subunit BlpM	NA	NA	NA	NA
WP_001099490.1\|502753_502957_+\|bacteriocin	two-peptide bacteriocin subunit BlpN	NA	NA	NA	NA
WP_001809846.1\|503200_503350_+\|bacteriocin	bacteriocin-like peptide BlpO	NA	NA	NA	NA
WP_000346296.1\|503453_503573_+	hypothetical protein	NA	NA	NA	NA
WP_033705507.1\|504040_504412_+	hypothetical protein	NA	NA	NA	NA
WP_033705506.1\|505788_506022_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_033705505.1\|506053_506743_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_5

816059 : 883321

Streptococcus_phage(55.0%)

protease,transposase,integrase,tRNA,bacteriocin

attL 826384:826412|attR 829662:829690

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000530084.1\|816059_817316_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	5.9e-234	97.1
WP_033705332.1\|817487_817922_-	hypothetical protein	NA	NA	NA	NA
WP_033705331.1\|818059_819202_+	cysteine desulfurase	NA	NA	NA	NA
WP_033705330.1\|819210_820425_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_166735681.1\|820559_821384_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_033705329.1\|822157_823324_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_001825037.1\|825337_825880_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_033705328.1\|825876_826995_+	restriction endonuclease subunit S	NA	NA	NA	NA
826384:826412	attL	NA	NA	NA	NA
WP_000260605.1\|827054_827291_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_000158366.1\|827287_827701_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_033705544.1\|828727_829657_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	1.8e-33	29.6
WP_001821324.1\|829622_830198_+	restriction endonuclease subunit S	NA	NA	NA	NA
829662:829690	attR	NA	NA	NA	NA
WP_000526318.1\|830227_833578_+	DEAD/DEAH box helicase family protein	A0A2H4P9W3	Gordonia_phage	2.4e-11	24.8
WP_000530084.1\|834207_835464_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	5.9e-234	97.1
WP_001042995.1\|835588_836059_-	arginine repressor	NA	NA	NA	NA
WP_001212037.1\|836075_838349_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA
WP_000561503.1\|838695_841797_+	DNA polymerase III subunit alpha	A0A291AWR1	Streptomyces_phage	4.4e-113	32.6
WP_000820852.1\|841879_842887_+	6-phosphofructokinase	NA	NA	NA	NA
WP_001042809.1\|842945_844451_+	pyruvate kinase	NA	NA	NA	NA
WP_061543377.1\|845567_845822_-	phage repressor protein	B3GVX0	Streptococcus_phage	2.2e-18	60.0
WP_000749599.1\|846257_847130_+	DUF4300 family protein	NA	NA	NA	NA
WP_000420571.1\|847762_848074_+	hypothetical protein	NA	NA	NA	NA
WP_166735682.1\|848077_848794_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000617845.1\|848923_849739_-	TIGR03943 family protein	NA	NA	NA	NA
WP_000123614.1\|849735_850641_-	permease	NA	NA	NA	NA
WP_076742442.1\|850982_851348_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_001809527.1\|851344_852349_+	DUF1919 domain-containing protein	NA	NA	NA	NA
WP_000359137.1\|852450_854580_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_000778576.1\|854566_855016_+	SprT family protein	NA	NA	NA	NA
WP_001085044.1\|855074_855347_+	PspC domain-containing protein	NA	NA	NA	NA
WP_000680766.1\|855700_855892_-	hypothetical protein	NA	NA	NA	NA
WP_033705394.1\|856319_857078_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.7e-27	36.3
WP_000489404.1\|857079_859068_+	ABC transporter permease	NA	NA	NA	NA
WP_166735741.1\|859110_859755_-	VIT family protein	NA	NA	NA	NA
WP_001153814.1\|859780_860656_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	8.0e-28	31.3
WP_000661011.1\|861362_862838_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_001270407.1\|863605_863743_+	hypothetical protein	NA	NA	NA	NA
WP_033705392.1\|863773_864634_+	polyamine aminopropyltransferase	NA	NA	NA	NA
WP_000088777.1\|864630_865890_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA
WP_001863222.1\|865889_867017_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA
WP_033705391.1\|867013_868099_+	agmatine deiminase	M1HES8	Acanthocystis_turfacea_Chlorella_virus	2.0e-89	47.5
WP_001246755.1\|868108_868984_+	N-carbamoylputrescine amidase	M1H5W0	Paramecium_bursaria_Chlorella_virus	1.1e-77	50.0
WP_000593576.1\|869164_869974_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_000602452.1\|870245_870467_+\|bacteriocin	SP_0924 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000745369.1\|870520_871192_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_001809535.1\|871243_871441_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001025729.1\|871433_872342_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	5.2e-06	27.7
WP_000745389.1\|872338_872800_+	signal peptidase II	NA	NA	NA	NA
WP_000403193.1\|872789_873677_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_033705390.1\|873679_875563_+	MBL fold metallo-hydrolase	Q332B9	Clostridium_botulinum_C_phage	1.5e-10	23.7
WP_001844793.1\|875642_876773_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-114	58.4
WP_033705388.1\|876782_878045_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.5e-141	65.0
WP_000689716.1\|878048_878846_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	8.0e-59	49.8
WP_166735683.1\|879065_879704_+	dTMP kinase	M1PSC7	Streptococcus_phage	7.0e-74	67.2
WP_000806706.1\|879700_880591_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.4e-72	51.4
WP_000358228.1\|880630_880948_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.9e-28	60.0
WP_001166880.1\|880950_881820_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.7e-116	76.1
WP_001261456.1\|882046_882565_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_000345254.1\|882673_883321_+	replication initiator protein A	A0A2P0VK56	Streptococcus_phage	7.0e-13	33.7

DBSCAN-SWA_6

1071498 : 1096122

Streptococcus_phage(90.0%)

integrase

attL 1079714:1079730|attR 1097113:1097129

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033705457.1\|1071498_1074312_+	CHAP domain-containing protein	Q4Z9D9	Staphylococcus_phage	1.2e-08	40.4
WP_000026229.1\|1074353_1074563_+	hypothetical protein	NA	NA	NA	NA
WP_000420682.1\|1074878_1075193_+	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
WP_000985015.1\|1075208_1075595_+	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000813488.1\|1075623_1077009_+	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
WP_000879507.1\|1077011_1077164_+	hypothetical protein	NA	NA	NA	NA
WP_001841741.1\|1077186_1078605_+	helix-turn-helix domain-containing protein	A0A1S5SEX3	Streptococcus_phage	6.3e-232	99.0
WP_001814874.1\|1078653_1078737_+	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA
WP_001038795.1\|1078861_1079599_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	3.1e-134	99.2
1079714:1079730	attL	NA	NA	NA	NA
WP_001009056.1\|1081282_1081504_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000342539.1\|1081620_1082118_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_000506270.1\|1082092_1082599_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_000331160.1\|1082582_1085030_+	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
WP_166735693.1\|1085032_1087210_+	YtxH domain-containing protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	99.9
WP_033705455.1\|1087206_1088208_+	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	7.7e-184	95.8
WP_033705454.1\|1088222_1089137_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	9.5e-157	92.4
WP_001814923.1\|1089381_1089498_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_000691743.1\|1089513_1091433_+	tetracycline resistance ribosomal protection protein Tet(M)	A0A2K5B2A5	Erysipelothrix_phage	0.0e+00	97.8
WP_000336323.1\|1091551_1091719_+	conjugal transfer protein	D0R0F6	Streptococcus_phage	1.6e-14	68.0
WP_001227347.1\|1091778_1092132_-	helix-turn-helix transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
WP_000804885.1\|1093509_1093932_+	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
WP_000857133.1\|1093928_1094159_+	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_000814511.1\|1094619_1094823_+	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_001291561.1\|1094904_1096122_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
1097113:1097129	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1109967 : 1119474

Streptococcus_phage(77.78%)

integrase

attL 1108370:1108385|attR 1123598:1123613

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1108370:1108385	attL	NA	NA	NA	NA
WP_000579623.1\|1109967_1110444_+	helix-turn-helix transcriptional regulator	X2CXD8	Lactobacillus_phage	8.8e-05	31.9
WP_000405354.1\|1110443_1111214_+	toxin PezT	NA	NA	NA	NA
WP_000492698.1\|1111469_1112153_+	helix-turn-helix transcriptional regulator	E8ZDN4	Streptococcus_phage	8.3e-65	52.7
WP_000118332.1\|1112155_1113571_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	1.5e-201	72.6
WP_000981955.1\|1113567_1113933_+	hypothetical protein	A0A1B0RXA8	Streptococcus_phage	3.0e-21	45.5
WP_001080184.1\|1113922_1114213_+	hypothetical protein	Q6DMX6	Streptococcus_phage	3.1e-21	52.7
WP_000827835.1\|1114507_1114864_+	hypothetical protein	NA	NA	NA	NA
WP_000401236.1\|1114868_1115234_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_000237134.1\|1115220_1117050_+	relaxase/mobilization nuclease domain-containing protein	A0A1B0RXG0	Streptococcus_phage	3.6e-06	37.5
WP_000919632.1\|1117153_1117381_+	helix-turn-helix transcriptional regulator	A0A0A7RUJ5	Clostridium_phage	1.0e-06	46.9
WP_001022845.1\|1117647_1117881_+	hypothetical protein	W6LM55	Streptococcus_phage	4.6e-15	50.7
WP_000291923.1\|1117965_1119474_+\|integrase	site-specific integrase	M1NRJ9	Streptococcus_phage	8.4e-25	27.6
1123598:1123613	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1170765 : 1237140

Bacillus_phage(17.65%)

holin,protease,transposase,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000530084.1\|1170765_1172022_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	5.9e-234	97.1
WP_033705352.1\|1172071_1172374_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_166735696.1\|1172634_1173513_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_001002635.1\|1173522_1174797_-	DUF2130 domain-containing protein	NA	NA	NA	NA
WP_000200428.1\|1174892_1175486_-	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA
WP_001231016.1\|1175486_1176008_-	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA
WP_000128188.1\|1176029_1176152_-	hypothetical protein	NA	NA	NA	NA
WP_000625732.1\|1176299_1177097_-	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_000078847.1\|1177340_1178084_-	sortase	NA	NA	NA	NA
WP_033705351.1\|1178083_1180552_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.1e-105	35.5
WP_000204727.1\|1180745_1181732_+	L-lactate dehydrogenase	NA	NA	NA	NA
WP_001143843.1\|1182029_1185284_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_000150984.1\|1185448_1187335_-	type II restriction endonuclease	A0A1V0SF91	Hokovirus	1.1e-10	23.7
WP_001812387.1\|1187409_1187664_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000208080.1\|1187665_1187908_-	hypothetical protein	NA	NA	NA	NA
WP_001289493.1\|1187998_1188808_-	MBL fold metallo-hydrolase	A0A0C5AFC1	Paenibacillus_phage	1.8e-34	39.0
WP_000886210.1\|1188809_1190159_-	cell wall metabolism sensor histidine kinase VicK	W8CYF6	Bacillus_phage	1.8e-34	34.6
WP_000722076.1\|1190151_1190856_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.8e-39	39.8
WP_000886147.1\|1190910_1192086_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000845290.1\|1192414_1194085_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_000699488.1\|1194314_1195004_+	phosphopantothenate--cysteine ligase	NA	NA	NA	NA
WP_001284128.1\|1195015_1195567_+	phosphopantothenoylcysteine decarboxylase	A0A068EHP1	Penguinpox_virus	3.1e-25	37.6
WP_000747408.1\|1195550_1196114_+	ECF transporter S component	NA	NA	NA	NA
WP_001097389.1\|1196395_1196923_+	membrane protein	NA	NA	NA	NA
WP_000159185.1\|1196934_1197450_+	transcription repressor NadR	NA	NA	NA	NA
WP_000085593.1\|1197446_1197914_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_000216012.1\|1197986_1198475_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000639842.1\|1198440_1199004_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000607027.1\|1199013_1201002_-	excinuclease ABC subunit B	NA	NA	NA	NA
WP_033705350.1\|1201078_1202032_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_033705349.1\|1202204_1204370_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_001096313.1\|1204369_1205110_+	amino acid ABC transporter ATP-binding protein	W5SAS9	Pithovirus	2.8e-18	27.3
WP_166735697.1\|1205258_1206746_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	1.9e-69	32.8
WP_000522311.1\|1206791_1208081_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_000763458.1\|1208084_1208903_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_000153023.1\|1208902_1209697_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_166735698.1\|1209693_1213233_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_000661498.1\|1213223_1213922_-	ribonuclease III	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	3.9e-25	33.8
WP_000931178.1\|1214239_1215226_-	GMP reductase	G3MBI2	Bacillus_virus	1.1e-137	72.2
WP_001813445.1\|1215400_1216717_-	McrC family protein	NA	NA	NA	NA
WP_033707845.1\|1216703_1218635_-	McrB family protein	K4I1H4	Acidithiobacillus_phage	1.8e-16	33.7
WP_001810980.1\|1218798_1218960_-	hypothetical protein	NA	NA	NA	NA
WP_000199865.1\|1219220_1219364_-	hypothetical protein	NA	NA	NA	NA
WP_001811821.1\|1219582_1219942_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_000762426.1\|1219945_1220215_-	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_001010962.1\|1221260_1222355_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_000461588.1\|1222373_1223030_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_000638789.1\|1223073_1223706_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001220357.1\|1223798_1224158_-	YbaN family protein	NA	NA	NA	NA
WP_000179635.1\|1224378_1226466_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	3.0e-105	37.6
WP_001812710.1\|1226632_1227676_-	TIGR00341 family protein	NA	NA	NA	NA
WP_000705325.1\|1228559_1229408_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.9e-34	39.5
WP_033707849.1\|1229503_1230193_-\|holin	CTP--phosphocholine cytidylyltransferase	A0A127AW70	Bacillus_phage	3.4e-05	45.0
WP_000837609.1\|1230204_1231083_-	DMT family transporter	NA	NA	NA	NA
WP_033705343.1\|1231072_1231942_-	phosphotransferase family protein	NA	NA	NA	NA
WP_000609885.1\|1231958_1232981_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_033705342.1\|1232985_1233693_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000835915.1\|1234028_1235516_+	type IV teichoic acid flippase TacF	NA	NA	NA	NA
WP_000811874.1\|1235525_1236329_+\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	5.3e-10	27.1
WP_001199652.1\|1236330_1237140_+\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	9.1e-10	30.3

DBSCAN-SWA_9

1378789 : 1436079

Streptococcus_phage(29.41%)

tRNA,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_166735708.1\|1378789_1380046_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.9e-233	97.1
WP_000065723.1\|1380131_1381694_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.4e-19	32.8
WP_000936200.1\|1381835_1382534_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000071672.1\|1382576_1383473_-	EamA family transporter	NA	NA	NA	NA
WP_000872215.1\|1383481_1384417_-	serine hydrolase	NA	NA	NA	NA
WP_001102211.1\|1384413_1385139_-	proteinase	NA	NA	NA	NA
WP_033705433.1\|1385222_1385858_-\|holin	1-alkyl-2-acetylglycerophosphocholine esterase	A0A2K9L661	Tupanvirus	6.7e-08	28.7
WP_000972916.1\|1385859_1386687_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_166735709.1\|1388286_1388898_+	peptide deformylase	E3SLL2	Synechococcus_phage	6.4e-16	42.7
WP_000855753.1\|1388942_1389671_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000272306.1\|1389709_1390621_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	4.5e-90	51.8
WP_000926599.1\|1390686_1390911_-	DUF4059 family protein	NA	NA	NA	NA
WP_000590970.1\|1390988_1391732_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-29	40.5
WP_001103449.1\|1391731_1392532_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000889093.1\|1392689_1393046_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.2e-33	57.3
WP_001170347.1\|1393039_1393570_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.4e-46	54.3
WP_000405859.1\|1393569_1394064_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	8.5e-43	52.8
WP_000858735.1\|1394198_1394645_+	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_001097986.1\|1394641_1395289_+	hemolysin III family protein	NA	NA	NA	NA
WP_000689945.1\|1395309_1395891_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA
WP_000138517.1\|1395891_1396767_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA
WP_000036784.1\|1396918_1398298_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000175413.1\|1398591_1399515_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_000915924.1\|1399574_1400180_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	7.7e-54	54.2
WP_000673694.1\|1400198_1401443_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	1.7e-55	52.7
WP_166735710.1\|1401665_1401923_-	DUF896 family protein	NA	NA	NA	NA
WP_000164783.1\|1401964_1404001_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_000038749.1\|1404212_1405130_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_012677106.1\|1405323_1405650_-	hypothetical protein	NA	NA	NA	NA
WP_001846081.1\|1405616_1405901_-	hypothetical protein	NA	NA	NA	NA
WP_166735711.1\|1406173_1407016_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.0e-51	40.2
WP_001173907.1\|1407129_1408467_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_001850008.1\|1408755_1409133_-	hypothetical protein	NA	NA	NA	NA
WP_000915893.1\|1409347_1410325_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_033705429.1\|1410321_1411404_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.8e-37	31.1
WP_001040724.1\|1413760_1414957_-	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	7.3e-32	29.6
WP_000348122.1\|1415867_1416737_-	aquaporin family protein	NA	NA	NA	NA
WP_000248996.1\|1416959_1417481_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_000935666.1\|1418653_1418908_-	hypothetical protein	NA	NA	NA	NA
WP_033705262.1\|1419265_1419799_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_001808732.1\|1419785_1420001_-\|transposase	transposase	NA	NA	NA	NA
WP_001815446.1\|1419967_1420111_-\|transposase	transposase	NA	NA	NA	NA
WP_033705263.1\|1420344_1422063_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	4.4e-272	83.0
WP_000434644.1\|1422173_1422521_+	thioredoxin	NA	NA	NA	NA
WP_000759187.1\|1422799_1423636_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000891770.1\|1423648_1424278_-	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-28	37.3
WP_000120830.1\|1424287_1424929_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_166735712.1\|1425074_1426304_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_166735713.1\|1426315_1427461_-	AI-2E family transporter	NA	NA	NA	NA
WP_033705265.1\|1427604_1428618_+	lactonase family protein	NA	NA	NA	NA
WP_000068050.1\|1428662_1429082_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_166735714.1\|1429092_1430499_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_000301210.1\|1430584_1431463_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_000996636.1\|1431478_1432984_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_000359036.1\|1432998_1433535_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_166735715.1\|1433534_1434029_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_000392851.1\|1434042_1434759_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_001054562.1\|1434793_1434994_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_166735716.1\|1435068_1436079_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	7.8e-35	36.1

DBSCAN-SWA_10

1492214 : 1498968

Streptococcus_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033708093.1\|1492214_1493183_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	1.1e-65	99.2
WP_000011306.1\|1493216_1494128_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	1.5e-154	99.7
WP_033708095.1\|1494124_1495102_-	YvcK family protein	A1IMD5	Streptococcus_phage	3.4e-184	99.7
WP_033708096.1\|1495098_1495989_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.9e-06	29.8
WP_001140412.1\|1496040_1496421_-	RidA family protein	NA	NA	NA	NA
WP_000422599.1\|1496431_1497019_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_000106346.1\|1497027_1498260_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.2e-131	59.0
WP_000442275.1\|1498291_1498462_-	hypothetical protein	NA	NA	NA	NA
WP_000162486.1\|1498461_1498968_-	dihydrofolate reductase	G3MBI7	Bacillus_virus	2.3e-27	43.1

DBSCAN-SWA_11

1750284 : 1757616

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000167833.1\|1750284_1750986_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	4.6e-34	36.1
WP_000777248.1\|1751408_1752368_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.0e-57	40.8
WP_001193674.1\|1752357_1753314_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_000764303.1\|1753310_1754063_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.6e-14	28.1
WP_000858245.1\|1754158_1755124_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000821640.1\|1755348_1755591_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.3e-17	59.4
WP_001222228.1\|1755590_1756313_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000105310.1\|1756299_1756869_-	segregation/condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	5.0e-15	34.9
WP_000351912.1\|1756887_1757616_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.9e-09	22.3

DBSCAN-SWA_12

1948603 : 2011495

Bacillus_phage(31.25%)

tRNA,transposase,integrase,protease

attL 1942475:1942491|attR 1950956:1950972

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1942475:1942491	attL	NA	NA	NA	NA
WP_166735733.1\|1948603_1949164_+\|integrase	integrase	NA	NA	NA	NA
WP_166735743.1\|1949124_1949736_+\|integrase	site-specific integrase	A0A0S2MV79	Bacillus_phage	1.6e-27	41.2
WP_033705234.1\|1949776_1950202_+	GTP pyrophosphokinase	A0A141E1X8	Streptococcus_phage	1.1e-38	64.3
WP_033705235.1\|1950339_1950960_-	hypothetical protein	NA	NA	NA	NA
WP_000530084.1\|1951202_1952459_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	5.9e-234	97.1
1950956:1950972	attR	NA	NA	NA	NA
WP_000355909.1\|1958916_1959351_-	cytidine deaminase	NA	NA	NA	NA
WP_001862475.1\|1959364_1960825_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_000018260.1\|1960948_1962298_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000400702.1\|1962284_1962464_-	hypothetical protein	NA	NA	NA	NA
WP_000124750.1\|1962467_1963157_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_000859859.1\|1963295_1965062_-	multidrug efflux ABC transporter subunit PatB	W8CYL7	Bacillus_phage	4.1e-39	25.6
WP_050091342.1\|1965841_1967536_-	multidrug efflux ABC transporter subunit PatA	G9BWD6	Planktothrix_phage	2.6e-14	30.7
WP_061468547.1\|1967682_1970217_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.1e-34	21.6
WP_001231473.1\|1970267_1970714_-	arginine repressor	NA	NA	NA	NA
WP_001092701.1\|1970849_1972541_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	3.5e-80	32.2
WP_000356601.1\|1973389_1973866_+	cupin	A0A291ATU0	Pandoravirus	1.0e-16	34.6
WP_000166475.1\|1973949_1974657_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.4e-38	39.6
WP_000833277.1\|1974657_1975989_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.9e-33	34.9
WP_000669493.1\|1976155_1977031_+	phosphate-binding protein	NA	NA	NA	NA
WP_000595180.1\|1977148_1978012_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_000049768.1\|1978004_1978820_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_000536449.1\|1978821_1979574_+	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	3.9e-15	27.4
WP_001245781.1\|1979588_1980239_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000183464.1\|1980306_1980723_+\|transposase	transposase	NA	NA	NA	NA
WP_001206584.1\|1980845_1981286_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000415108.1\|1981497_1982514_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_000202229.1\|1982535_1983435_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.1e-75	50.3
WP_000658498.1\|1983501_1984179_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_000834308.1\|1984162_1984702_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_000885102.1\|1984713_1985844_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA
WP_000127466.1\|1985911_1986610_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA
WP_001812545.1\|1986839_1987751_-	EamA family transporter	NA	NA	NA	NA
WP_001180961.1\|1987815_1990281_-	penicillin-binding protein	NA	NA	NA	NA
WP_000546881.1\|1990422_1991679_+\|tRNA	tyrosine--tRNA ligase	A0A2C9CYK4	Yersinia_phage	2.5e-75	41.5
WP_033705118.1\|1991756_1993820_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.2e-52	26.2
WP_000910909.1\|1993821_1994100_-	hypothetical protein	NA	NA	NA	NA
WP_001095515.1\|1994251_1995100_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_001037911.1\|1995700_1996273_+	membrane protein	NA	NA	NA	NA
WP_000950158.1\|1997317_1999576_-	glycogen/starch/alpha-glucan family phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	5.7e-09	37.5
WP_000747289.1\|1999601_2001119_-	4-alpha-glucanotransferase	NA	NA	NA	NA
WP_000095484.1\|2001668_2002940_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_000414968.1\|2003050_2004343_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_001065636.1\|2004344_2005187_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_000938227.1\|2005439_2006240_+	DUF1189 domain-containing protein	NA	NA	NA	NA
WP_001145439.1\|2006249_2007236_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_000695830.1\|2007376_2007568_+	hypothetical protein	NA	NA	NA	NA
WP_033705116.1\|2007571_2008513_-	YitT family protein	NA	NA	NA	NA
WP_000830876.1\|2008490_2010254_-\|tRNA	aspartate--tRNA ligase	A0A1V0SJ84	Klosneuvirus	5.0e-13	26.4
WP_000832180.1\|2010605_2010836_-	hypothetical protein	NA	NA	NA	NA
WP_000771214.1\|2010853_2011495_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_13

2121341 : 2130095

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000510412.1\|2121341_2122181_-	energy-coupling factor transporter ATPase	W8CYL7	Bacillus_phage	1.1e-15	32.6
WP_033705083.1\|2122165_2122993_-	energy-coupling factor transporter ATPase	W8CYL7	Bacillus_phage	1.0e-16	32.8
WP_000712132.1\|2122989_2123535_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_001227957.1\|2123545_2124367_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000170195.1\|2124408_2125692_-	insulinase family protein	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	1.1e-17	30.0
WP_000424263.1\|2125688_2126939_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	3.5e-93	42.3
WP_000455903.1\|2127097_2127466_+	S4 domain-containing protein YaaA	A0A1X9I5V8	Streptococcus_phage	7.0e-18	57.3
WP_000266660.1\|2127468_2128566_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_000073428.1\|2128616_2130095_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.2e-94	40.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050175

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection