CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP050177	Streptomyces sp. QMT-12 chromosome, complete genome	36 crisprs	WYL,DEDDh,cas3,DinG,csa3,Cas9_archaeal,cas4	16	17	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050177_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_1

1420816-1420965

Orphan

Consensus_repeat	Method
AGCCCGTCCGGCGATTGAGGACATC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP050177_1

>merge|NZ_CP050177|1|1420816-1420965|CRISPRCasFinder
AGCCCGTCCGGCGATTGAGGACATCTTTGACCCGCACGGTCATCGAGCCCGAGCATCATCCAGCCCGTCCGGCGCTTGAGGACATCGGTGAGCCGCGCCCGCGCTACGGGTCGACGCGCAAGCCAAGCCCGTCCGGCGATTGAGGACGTC

>NZ_CP050177|1|1|1420816-1420965|CRISPRCasFinder
AGCCCGTCCGGCGATTGAGGACATC	TTTGACCCGCACGGTCATCGAGCCCGAGCATCATCC
AGCCCGTCCGGCGCTTGAGGACATC	GGTGAGCCGCGCCCGCGCTACGGGTCGACGCGCAAGCCA
AGCCCGTCCGGCGATTGAGGACGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167024923.1\|1410433_1411030_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167036308.1\|1424557_1424821_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167024943.1\|1419368_1420601_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP050177.1\|WP_167024951.1\|1423722_1424526_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP050177.1\|WP_167024960.1\|1427756_1428398_+\|TIGR03086-family-protein	unknown	unknown	gnl\|CDD\|274424
NZ_CP050177.1\|WP_167024954.1\|1425147_1425822_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133025
NZ_CP050177.1\|WP_167024931.1\|1414348_1415377_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380535
NZ_CP050177.1\|WP_167024969.1\|1431581_1432445_+\|chitosanase	unknown	unknown	gnl\|CDD\|376538
NZ_CP050177.1\|WP_167024928.1\|1412481_1413279_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP050177.1\|WP_167036311.1\|1430731_1431415_+\|chitosanase	unknown	unknown	gnl\|CDD\|376538
NZ_CP050177.1\|WP_167024957.1\|1426068_1427700_+\|malate-synthase-A	unknown	unknown	gnl\|CDD\|236432
NZ_CP050177.1\|WP_167024925.1\|1411026_1412190_-\|ROK-family-glucokinase	unknown	unknown	gnl\|CDD\|273246
NZ_CP050177.1\|WP_167024940.1\|1418682_1419372_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP050177.1\|WP_167036302.1\|1413275_1414331_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP050177.1\|WP_167024963.1\|1428508_1428910_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP050177.1\|WP_167036305.1\|1415534_1416272_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP050177.1\|WP_167024949.1\|1422106_1423456_-\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|238640
NZ_CP050177.1\|WP_167024934.1\|1416425_1417430_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|275173
NZ_CP050177.1\|WP_167024937.1\|1417493_1418678_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP050177.1\|WP_167024966.1\|1429073_1430522_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167024943.1\|1419368_1420601_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.09492e-30
NZ_CP050177.1\|WP_167024951.1\|1423722_1424526_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	2.63721e-70
NZ_CP050177.1\|WP_167024960.1\|1427756_1428398_+\|TIGR03086-family-protein	gnl\|CDD\|274424	TIGR03086, TIGR03086, TIGR03086 family protein. This family, like pfam07398 and TIGRFAMs family TIGR030834, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized.	2.25745e-33
NZ_CP050177.1\|WP_167024954.1\|1425147_1425822_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.45165e-47
NZ_CP050177.1\|WP_167024931.1\|1414348_1415377_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380535	cd06312, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	7.20884e-97
NZ_CP050177.1\|WP_167024969.1\|1431581_1432445_+\|chitosanase	gnl\|CDD\|376538	pfam01374, Glyco_hydro_46, Glycosyl hydrolase family 46. This family are chitosanase enzymes.	5.28602e-144
NZ_CP050177.1\|WP_167024928.1\|1412481_1413279_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	1.34061e-98
NZ_CP050177.1\|WP_167036311.1\|1430731_1431415_+\|chitosanase	gnl\|CDD\|376538	pfam01374, Glyco_hydro_46, Glycosyl hydrolase family 46. This family are chitosanase enzymes.	2.39643e-121
NZ_CP050177.1\|WP_167024957.1\|1426068_1427700_+\|malate-synthase-A	gnl\|CDD\|236432	PRK09255, PRK09255, malate synthase; Validated.	0
NZ_CP050177.1\|WP_167024925.1\|1411026_1412190_-\|ROK-family-glucokinase	gnl\|CDD\|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	2.21717e-87
NZ_CP050177.1\|WP_167024940.1\|1418682_1419372_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	9.6638e-67
NZ_CP050177.1\|WP_167036302.1\|1413275_1414331_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	5.82287e-63
NZ_CP050177.1\|WP_167024963.1\|1428508_1428910_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.38987e-38
NZ_CP050177.1\|WP_167036305.1\|1415534_1416272_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	6.83442e-64
NZ_CP050177.1\|WP_167024949.1\|1422106_1423456_-\|allantoinase-AllB	gnl\|CDD\|238640	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.	0
NZ_CP050177.1\|WP_167024934.1\|1416425_1417430_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|275173	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase. All members of the seed alignment for this model are known or predicted inositol 2-dehydrogenase sequences co-clustered with other enzymes for catabolism of myo-inositol or closely related compounds. Inositol 2-dehydrogenase catalyzes the first step in inositol catabolism. Members of this family may vary somewhat in their ranges of acceptable substrates and some may act on analogs to myo-inositol rather than myo-inositol per se. [Energy metabolism, Sugars].	4.90075e-107
NZ_CP050177.1\|WP_167024937.1\|1417493_1418678_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.25271e-98
NZ_CP050177.1\|WP_167024966.1\|1429073_1430522_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.21011e-61

>NZ_CP050177.1|WP_167024943.1|1419368_1420601_-|sensor-histidine-kinase
MTRTDYPWLLPAEMVDSETADSETADPETVRRGTPRTVRDWVVDTLVFLAAAGFGMLATDASQVAGNADGVVFLDVMLGALACCALWTRRRWPVGLAVTLALLSTVEPVASGAALASLFGVAVHRPFRPVAVVALLSLVTGTVQSVVRPDPTTSFLTSLIATVLLVLLAVGWGLLVRARRQLVAALRERAVRAEAEADLRAEQAQRLARESIAREMHDVLAHRLSLLSVHAGALEFRPDAPAPEVARAAGVIRDSAHEALQDLRMIIGVLRAPGDDGDRPQPTLVTLDELVAESRAAGMKVTLDSGVADVSAVPAATGRTAYRIAQEGLTNARKHAPGTEATVAVSGGPGDGLTVEVRNAAPSGEVPRVPGSGQGLIGLTERAALAGGRFDHGPTGDGGFALRAWLPWAA
>NZ_CP050177.1|WP_167024940.1|1418682_1419372_-|response-regulator-transcription-factor
MTIRLLIVDDDPLVRAGLTFMLGGAEDIEIVGEAADGTQVAPLVERCAPDVVLMDIRMPAMDGLTATEALRSRPGAPEVLVLTTFHADEQVLRALRAGAAGFVLKDTPPDRIVAAVRRVAAGDPVLSPAVTRQLMTHVAGTSPDTRRRGAAGRLASLAEREREVAYAVGRGRSNAEIAADLYMSVPTVKAHVSRVLAKLGLNNRVQIALLVHDADPATGDGGGPGGDVR
>NZ_CP050177.1|WP_167024937.1|1417493_1418678_-|cytochrome-P450
MAVIELDDYGPDFISDPYPFYAKLREAGPVHEVRDETGQRFWLVVGYEEGRAALADPRLSKSNAVGGLPDELLGPNMLTVDPPDHTRLRKLIAREFTARRVESLRPRVQRITDDLLDALPDTGRADLVDALAFPLPITVICELLGVPYEDRDTFRAWTNDIVAPRRPEDVLEPVEELGKYLDHLIEDKRAAHPGDDLLSALLRTNAEDDDRLSTAELRAMAFVLLIAGHETTVNLISNGVRALLDHPGQLAALRADFSLLDGAIEEMLRYDGPVETSTRRFAREPVAYGDVVVPPGDMVLIALAAADRDPARFTAPDAFDIRRSRTPGRGGGHLAFGHGIHFCLGAPLARLEGRIAVRSLLERCPDLALDPGAGPYDWLPGRLIRGTRGLPVRW
>NZ_CP050177.1|WP_167024934.1|1416425_1417430_+|Gfo/Idh/MocA-family-oxidoreductase
MRIGLIGTGRIGTFHAEVLSRHREVGALVVTDTDAARASFVADRTGSTAAPSVDEIFAWGVDAVVIASATSAHADLISRAARAGLPAFCEKPIALDLPGTLGALADVEKAGTVLQLGFMRRFDAGYTAARELVRSGKLGRLHTVRAITSDPAPPPAGYLPLSGGLYRDCLVHDFDIMRWVTGREVVEVYATGSDAGPAMFREAGDVDTAAVVLTLDDGTLATATATRFNGAGYDVRMELAGELDQFAVGLDDRTPITSTEPKGPPRCDNPWPGFLERFAPAYEAELDAFIQVVNGDLENPCDGLQALQALRIAEACERSRREHRPVALAEIPGA
>NZ_CP050177.1|WP_167036305.1|1415534_1416272_-|GntR-family-transcriptional-regulator
MPLQLSVDRTSPVPLYFQLSQQLEGAIEQGRLAPGSLLGNEIELAGRLGLSRPTVRQAIQSLVDKGLLVRRRGVGTQVVHSQVKRPLELSSLFDDLEAAGQRPATRVLANTLEPATARIAAALGVTEGAEVRLIERLRYAHDEPMAYLRNHLPPGMFECDTPRLEATGLYRMMRSGGITLHSARQSVGARAATPEEAGQLTEPAGAPLLTMERTTFDDTGRAVEFGSHIYRASRYAFEFQLLVRP
>NZ_CP050177.1|WP_167024931.1|1414348_1415377_-|sugar-ABC-transporter-substrate-binding-protein
MAKVGTGVRAVGAVLAAVLGASALAGCSSTGGLRAEQRAARASAEGQAAGRAAVSTPNWTVAMVTHSGDGDTFWDIVQRGAKQAAEKDNIKFLYAHSDQGQEQAQQVQSYIDKKVDGLIVTLAKPDAMKDVLAKARKAGIPVITVNSGAEQSKAFGALAHIGQDESIAGEAVGDELDKRGKKKALCVIHEQGNVGHEQRCAGAKKTFDGSMTNLYVDGTNMPDVQASIEAKLQADPSIDAVVTLGAPFADAAAQAKKSADSKAEIDTFDLNAAVAASLQAGTLGFAVDQQPYLQGYEAVDLLWLYRYNADVLGGGRPVLTGPQIITQRDAGALAGYTKRGTR
>NZ_CP050177.1|WP_167036302.1|1413275_1414331_-|ABC-transporter-permease
MNDRPGGPGGPGPADERLLGTSPWRKLLGRPELGAVVGALAVFLFFAVVADSFLRMTSFGTVLYAASTIGIMAVPVALLMIGGEFDLSAGVMVTSSALVTSMFSYQMTANVWVGVFVSLLVTLALGAFNGFMLTRTKLPSFIITLGTFLMLTGLNLGLTKLISSTVSTKAIGDMEGFSSAKKLFASQLTVGNTEFKVTILWWIALVAVATWILLRTRFGNWIFAVGGNADAARAVGVPVAKTRIGLYMGVAFCAWISGQHLLFSFDVVQSGEGVGNELTYIIAAVIGGCLITGGYGSAVGSAVGAFIFGMTSKGIVYAEWNPDWFKFFLGAMLLLATLLNAWVRKRAEATR
>NZ_CP050177.1|WP_167024928.1|1412481_1413279_-|sugar-ABC-transporter-ATP-binding-protein
MTALVELDDVSKYYGNVRALEGVSLEVHAGSISCVLGDNGAGKSTLIKIISGLHRHDSGDFLIDGERTTLSSPREALDRGIATVYQDLAVVPLMPVWRNFFLGSEPTRGRGPFKRLDVDLMRATTRAELLRMGIDLRDVDQPIGTLSGGERQCVAIARAVHFGAKVLVLDEPTAALGVKQSGVVLKYVAAARDAGLGVVLITHNPHHAFLVGDRFTLLKRGVMAGSHTKDSITLDELTRQMAGGSELEELTHELSRPAAPGPAAD
>NZ_CP050177.1|WP_167024925.1|1411026_1412190_-|ROK-family-glucokinase
MSTYRDFAHRGSARGTVLRTVGTRERRSVLTAPRVPTVGIDIGGTKVMAGVVDPDGNILEKIRTETPDKSKSPRVVEDTIVELVLDLSDRHDVHAVGIGAAGWVDADRSRVLFAPHLAWRDEPLRDSIAGRLAVPVMVDNDANTAAWAEWRFGAGRGEDHLVMITLGTGIGGAILEDGRVKRGKYGVAGEFGHMQVVPGGHRCPCGNRGCWEQYSSGNALVREARELAVADSPVAYNIIDRVKGNVHEITGPLITELAREGDAMCIELFQDIGQWLGVGIANLAAALDPSCFVIGGGVSAADDLLIGPARDAFRRHLTGRGYRPEAHIVKAELGPEAGMVGAADLARLVARRFRRATRRRVERYERYERYAQAIRTSRTAPTEEPPS
>NZ_CP050177.1|WP_167024923.1|1410433_1411030_-|hypothetical-protein
MSSLPAHVPQPQPVRPGDDGKPPEDRRHRNRRRWLTAIVIVLLVGIPAGYLVVSAEQSRRSGRDKEAESSATGLQPLRPSKMKRRIYEVPVPGGATGLRYYETSNWKSSRLYVQFDVTSGRLDTFLGEMGVSRSSLKDGSIPISARDQRTVGWDFDIPGHAWAGVSHDQKDPRPSQDVVVDLSDPAFPRVYVVSTTTP
>NZ_CP050177.1|WP_167024949.1|1422106_1423456_-|allantoinase-AllB
MSEVSLVLRSTRVVTPEGIRPASVAVTAADGRIAAVLPYDTGVPPGARLEDAGDDVVLPGLVDTHVHVNDPGRTAWEGFRTATRAAAAGGITTLLDMPLNSLPPTTTAAHLRVKQDVARPRTHVDTGFWGGAIPGNVKDLRPLYDAGVFGFKCFLSPSGVDEFPELDREQLRRALTEITGFGGLLIVHAEDPHALAAAPQRGGGDYAGFLASRPRAAENAAVGLLIAEAKRLDARVHVLHLSSSDALPLIAAAQREGVRITAETCPHFLTLTAEEVPDGATEFKCCPPIREAANQDALWQGLADGTIDCVVSDHSPCTTDLKTPDFATAWGGISSLQLGLPAVWTEARRRGHTLADVARWMSTGPAALAGLAGKGAVEAGRDADLVVLAPDATFTVDPAALQHRNPVTAYAGRTLHGVVRSTWLRGTRIAHEGTLTEPAGRLIERNDRP
>NZ_CP050177.1|WP_167024951.1|1423722_1424526_+|IclR-family-transcriptional-regulator
MPSSSASTTDAAKTPASGGVQSLERAFDLLERMADAGGEVGLSELSASSGLPLPTIHRLMRTLVACGYVRQQSNRRYALGPRLIRLGESSARLLGTWARPYLARLVEETGETANMALLDGDEIVYVAQVPSKHSMRMFTEVGRRVLPHSTGVGKALLAHTPPEEVRALLARTGMPAATEKTITTAEGFLAALETVRGAGYAVDDNEQEMGVRCVAVSVPDSPTAAAISISGPAGRVTEAVTERIVPVLQEVARDLSVALASTTPQQG
>NZ_CP050177.1|WP_167036308.1|1424557_1424821_-|hypothetical-protein
MVELRAAVSRLRRELAAYPAEFRDRAIAEDELAALAAMAAGGAPEVPRMRRSLLLIVGSIGSVSALTSPLLAVRAAVDLFGYEPRPR
>NZ_CP050177.1|WP_167024954.1|1425147_1425822_+|nucleotidyltransferase-family-protein
MRYPGHMTAAPYERNPFRTPGARPRVAGLLLAAGGGRRLGGRPKALLAHRGALLVEHAAGVLHAGGCDPVHVVLGAAAEEVRRRAELPGSVLVDNRGWADGMGSSLRAGLTSLAATDARAVLVLLVDQPGIGAEAVARVVAACRSAEAPADALVSAAYDGRRGHPVVFGAHRWVEIAADARGDRGARAYLTAREDDITLVECGDVARAFDIDTEEDLRHLEPPA
>NZ_CP050177.1|WP_167024957.1|1426068_1427700_+|malate-synthase-A
MSAPAPSPLVVVDAEPLPRQDEVLTEAALTFVAELHRRFTPRRDELLAHRAERRAEIARTSSLDFLPETAAVRADDTWRVAPSPAALDDRRVEITGPTDRKMTINALNSGARIWLADFEDASAPTWENVVLGQVNLIDAYERRIDFTDPSSGKAYALKAPGELATVVMRPRGWHLAERHLQLDGEPVPGALVDFGLYFFHNARRLIDLGKGPYFYLPKTESYLEARLWNDVFVFAQDYVGIPRGTVRATVLIETITAAYEMEEILYELRDHASGLNAGRWDYLFSIVKNFRDGGAKFVLPDRNAVTMTAPFMRAYTELLVRTCHKRGAHALGGMAAFIPSRRDPEVNKVAFEKVKADKDREARDGFDGSWVAHPDLVPIAKASFDAVLGDRPHQKDRLREDVHVAAGDLIAVDSLDARPTYDGMRNAVQVGIRYIEAWLRGSGAVAIFNLMEDAATAEISRSQIWQWINAGVEFEHGGRTVRATPELARELAADELTSIRAESGEEAFAAGKWQQAHDLLLTVALDEDYADFLTLPAYEQLRG
>NZ_CP050177.1|WP_167024960.1|1427756_1428398_+|TIGR03086-family-protein
MDTDTSTTAGADLGPGTGPAEPGPVDLGPVCRATARVAAGIPDELLDGPTPCPAYTVRGMLAHLAGLTIAFRDAAGKKSGPTTDTAPEPGSVPELAEGWRALLPRQLDELAEAWRDPAAWEGATRVGGVDLPGGVAGVVALDEVLVHGWDLARATGQGYEADEAGLWAAYGMLAAPRPAEGIFAPPVAVPQDAPLLDRVIGLSGRRPDWRPGE
>NZ_CP050177.1|WP_167024963.1|1428508_1428910_-|helix-turn-helix-transcriptional-regulator
MSQGNTRVTAQVVHAQACPVREVLDRVAGKWSVLIIVAAAHGPIRFTELERSIEGISRRMLTLTLRNLERDGLLTRTVHATVPPKVEYELTPVARELHASLLGLTDWAERHRVTIAESRAAYDVAHGRGLDAG
>NZ_CP050177.1|WP_167024966.1|1429073_1430522_+|MFS-transporter
MTVLDGSIVTVAMPAIQSDLGFSPAGLAWVVNAYLIAFAGLLLLAGRLGDLLGRRRMFVSGLAVFTAASVLCGLSPTAGTLVAARFLQGVGGAMTSAVVLGMLVALFPEDRERTRAIAVFSASAAAGGAIGTFLGGALTATVGWHAIFLINLPIGAVALVAARRVLADDPGQGLREGADYLGAVLVTGALMLGVYTLVRTADHGWGSGRTFVLGALSLLLLAAFAVRQRYAADPLLRLGLLRSRTVTGANLVQVLMVAGMFTFQYLGALFLQRVLGLGELATGVAFLPAPVVIGVMMLGFSARLNTRFGPRPLLFGGLILIVGGLALFGRAPADGSYATDVLPVMVLLGVGFGLAMPALTGLAMAGVHPEDGGLASGLFSTTQVVGGALGLAVHAALASDRTRDLLAAGEAAGPAAGGGYRLAFLSAAGVAAAALLVAVALLRRGPSPGTARDAAEDGEDEAGATDTRDAEDSPTGSARVIS
>NZ_CP050177.1|WP_167036311.1|1430731_1431415_+|chitosanase
MELVSSAENSSLDWKAQYGYIEDIGDGRGYTAGIIGFCTGCGDLLQVVRRYTDARPHNRLAPFLPALRAVDGSASHTGLGAPFTTAWKQAATDPALRAAQDAERDREYFDPAVSRAKADGLGVLGQFIYYDAYVMHGAGDTKGTVGFRTIRARALRAADAPADGGDEKEYLGAFLDARVDAIRREPSHTDTSRVETAQRVFLAEGNLDLDPPLDWRVYGDRYRIAGE
>NZ_CP050177.1|WP_167024969.1|1431581_1432445_+|chitosanase
MSPIRSSRRLKFLPHALLGLTLVAIPATAVANTAPAPAGVTATSAGVRAAAAIGLDDPAKKEIAMQLVSSAENSSLNWKAQYGYIEDIGDGRGYTAGIIGFCSGTHDMLDLVELYTQRVPGNALAKYLPALRAVDGTDSHSGLGSGFVSAWKTAAKDTKFQTAQNDERDRVYFNPAVSRGKSDGVGVLGQFIYYDAIVMHGDGSDGTSFGGIRKRALAKAKPPAQGGNETTWLNAFLDARVWAMEQEEAHSDTSRVDTAQRVFLSKGNLNLNPPLDWKVYGDSFHIG

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Crispr_ID: NZ_CP050177_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_2

1464448-1464533

Orphan

Consensus_repeat	Method
CAGCCCGTCCGGCGCTTGAGGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_2

>merge|NZ_CP050177|2|1464448-1464533|CRISPRCasFinder
CAGCCCGTCCGGCGCTTGAGGACATCTTTGACCGCAACGGTCCCGCCCGACCGCAACCCCCTCCAGCCCGTCCGGCGATTGAGGAC

>NZ_CP050177|2|2|1464448-1464533|CRISPRCasFinder
CAGCCCGTCCGGCGCTTGAGGAC	ATCTTTGACCGCAACGGTCCCGCCCGACCGCAACCCCCTC
CAGCCCGTCCGGCGATTGAGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167025053.1\|1469887_1470466_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP050177.1\|WP_167036317.1\|1471682_1473521_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377939
NZ_CP050177.1\|WP_167025069.1\|1478662_1479835_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340391
NZ_CP050177.1\|WP_167025035.1\|1459425_1460691_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238733
NZ_CP050177.1\|WP_167025029.1\|1455804_1457211_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP050177.1\|WP_167025047.1\|1465777_1467238_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP050177.1\|WP_167025060.1\|1473874_1474651_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167025026.1\|1454744_1455587_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225107
NZ_CP050177.1\|WP_167025020.1\|1451270_1452923_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236236
NZ_CP050177.1\|WP_167036314.1\|1458538_1459357_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167025016.1\|1450689_1451250_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP050177.1\|WP_167025063.1\|1474797_1476597_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP050177.1\|WP_167025044.1\|1464537_1465704_-\|XdhC-family-protein	unknown	unknown	gnl\|CDD\|379212
NZ_CP050177.1\|WP_167025023.1\|1452919_1454632_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341278
NZ_CP050177.1\|WP_167025050.1\|1467431_1469891_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|132240
NZ_CP050177.1\|WP_167025057.1\|1470468_1471359_-\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238
NZ_CP050177.1\|WP_167025032.1\|1457189_1458365_-\|winged-helix-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377630
NZ_CP050177.1\|WP_167025041.1\|1462120_1464115_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|199881
NZ_CP050177.1\|WP_167025066.1\|1476593_1478336_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP050177.1\|WP_167025038.1\|1460904_1462158_+\|lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167025053.1\|1469887_1470466_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.58185e-63
NZ_CP050177.1\|WP_167036317.1\|1471682_1473521_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|377939	pfam07905, PucR, Purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.	6.07491e-26
NZ_CP050177.1\|WP_167025069.1\|1478662_1479835_+\|ATP-binding-protein	gnl\|CDD\|340391	cd00075, HATPase, Histidine kinase-like ATPase domain. This superfamily includes the histidine kinase-like ATPase (HATPase) domains of several ATP-binding proteins such as histidine kinase, DNA gyrase B, topoisomerases, heat shock protein 90 (HSP90), phytochrome-like ATPases and DNA mismatch repair proteins. Domains belonging to this superfamily are also referred to as GHKL (gyrase, heat-shock protein 90, histidine kinase, MutL) ATPase domains.	2.16436e-15
NZ_CP050177.1\|WP_167025035.1\|1459425_1460691_-\|VWA-domain-containing-protein	gnl\|CDD\|238733	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the members of this subgroup. All members of this subgroup however have a conserved MIDAS motif. .	1.0597e-44
NZ_CP050177.1\|WP_167025029.1\|1455804_1457211_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	2.79878e-151
NZ_CP050177.1\|WP_167025047.1\|1465777_1467238_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	3.48171e-110
NZ_CP050177.1\|WP_167025026.1\|1454744_1455587_+\|GAF-domain-containing-protein	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	9.49667e-13
NZ_CP050177.1\|WP_167025020.1\|1451270_1452923_-\|AMP-binding-protein	gnl\|CDD\|236236	PRK08315, PRK08315, AMP-binding domain protein; Validated.	0
NZ_CP050177.1\|WP_167025016.1\|1450689_1451250_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	7.36026e-05
NZ_CP050177.1\|WP_167025063.1\|1474797_1476597_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	5.51004e-128
NZ_CP050177.1\|WP_167025044.1\|1464537_1465704_-\|XdhC-family-protein	gnl\|CDD\|379212	pfam13478, XdhC_C, XdhC Rossmann domain. This entry is the rossmann domain found in the Xanthine dehydrogenase accessory protein.	9.79826e-50
NZ_CP050177.1\|WP_167025023.1\|1452919_1454632_-\|AMP-binding-protein	gnl\|CDD\|341278	cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS). MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.	0
NZ_CP050177.1\|WP_167025050.1\|1467431_1469891_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|132240	TIGR03196, pucD, xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.	0
NZ_CP050177.1\|WP_167025057.1\|1470468_1471359_-\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	8.18695e-60
NZ_CP050177.1\|WP_167025032.1\|1457189_1458365_-\|winged-helix-DNA-binding-domain-containing-protein	gnl\|CDD\|377630	pfam06224, HTH_42, Winged helix DNA-binding domain. This family contains two copies of a winged helix domain.	3.2553e-53
NZ_CP050177.1\|WP_167025041.1\|1462120_1464115_-\|hypothetical-protein	gnl\|CDD\|199881	cd02850, E_set_Cellulase_N, N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.	9.42548e-30
NZ_CP050177.1\|WP_167025066.1\|1476593_1478336_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.95911e-79
NZ_CP050177.1\|WP_167025038.1\|1460904_1462158_+\|lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	1.08464e-123

>NZ_CP050177.1|WP_167025041.1|1462120_1464115_-|hypothetical-protein
MLSPSRPTRATLVALAVAATALPAALGSGHAAAQSGVRGFADPSPVRVNQIGYLAGADKIATVVSARTTPLAWRLTDTTRGKVVATGTTRIHGTDRASGDHVHRADFSAVTRPGTYRLTVGGDESGGEGDGDGRGGSSVPFVVADTPLYPHLAREAMQYFYFHRLGTPVLARHLQSPAHAHDALHPGDSSVPCYEDWCGKQRLNVAQSWADAGDFGIYPVNHAIAAWTLMNLYERRPTVHGDSTLRIPERRNGRPDLLDEVEYGSRFLSGMLPASGLASHKVHNHRWSAFPVHDVAAENAEPRSAMGPSTNATYAVARTDAQLARVLRPFDPARADRLWASAQEAWKRAEAAPDVDYTDTTPDAVGGGDYPDPGNDDDRYAAAAELFLTAQRRARSGEDKGSAEPYRKAVTGSPHYGTITDFSWADVAPLGTLSLLAVDNDLPAADLTAMRGRLKAFCDEVIAVLDAEGYPAPIPGSGPYPWGSNSAVVNRMLLLGTDYDLTADPRALRAMHRSMDYLMGANAMRLSYVTGYGAYHETDLHDRLAWGRYPATPYPRGWLSGGPNSTLINDTATPTGRPAAKSYAGPGTAPAAWGSKENTVNWNAPLVWAATYLELTTPDLAVARTAAGSEADAGAEAAVRVPRTPRSAAPAAITAAGRTPRPAR
>NZ_CP050177.1|WP_167025038.1|1460904_1462158_+|lactonase-family-protein
MSSRSTGSATDSGGGGGLSRRRFVGVLAATSAVAAVPATAGAAAPLPTASPAPVAPAARATPVPTPAAPRAATRRLFLGTYTSSPGGGTGVGLATYDSATGSITGTGTLKGVPDPSYLAIHPDGRTLFAVDEQQAGKVTAIALADNGRHTVLGSRSTGGAGPTHLSVHPSGQWLLVANYTSGSVAVLPVQASGALGERTALVTHSTPPPGPGQGGPHAHQIVTSPDGGHVLAVDLGNDTVYTYRLDVGTGALTRVSYARLRPGAGPRHLTFHPSGTFAYLANELDNSVVVCAYDPGTGQLTPGEPQSTGTTGNTRSYPAELVVTDNGAFAYLANRGHNSLARYAIEADGAELRLLDTVPVGGDYPRQIALSPGGELLFAANQRSNSVTVFDVDQVTGELRSAGAPFTSPVAVCALPL
>NZ_CP050177.1|WP_167025035.1|1459425_1460691_-|VWA-domain-containing-protein
MIISKRSAAALCGLVATLAVGLFPPAASADEPSGKPAPKVDLVLDVSGSMRARDIDGQSRMAAAKQAFNEVLDAVPQEVELGIRTLGANYPGKDKKVGCEDTAQLYPVGPLDRTEAKTAVATLAPTGWTPIGPALLGAAKDLEGGDATRRIVLITDGEDTCAPLDPCEVAREIAAKGIHLVIDTLGLVPDAKTRRQLTCIAEATGGTYTSVQHTDELSGRVTQLVDRAADPVVTPVATEGAARCAGAPELKAGLYSDREKFSEHRWYRVNVSPGQELRASVSVAADRAVDRDYGVLLRAVTVHGREIVRGSEAGDGRTDVISTGLRYPRPEADDDAASAAEVVCVQVSNSFSAPDSVKTTPGLPVELTIQIVDSPDEPSDVAAFGLGRGWWLLGVLVLTGLVAGLLWGWVSRWRVAVWRTN
>NZ_CP050177.1|WP_167036314.1|1458538_1459357_-|hypothetical-protein
MSVRAGGLLAGSLLAAGALLTTAGPALADDTPTPSPSSSDGSGDGPTEAGTSFRTATGFRPGQEATADASTGDYLYWVFPVDTGQRATVSAKVTLPDSATRKGSATWQVDVYDGLRRHQPCVYGAATRAVSADADTLELRCTLRTVRAWAEPWSNDPLPGSYYVRLTVVNAQEEDLGLPVRVSVGAAVSDRGGAEAVGGGLAVPLTASAALADADGDGSDDEPSAAAVASEPSDGWASGWWSDRWVWTVAGGVLGALAGIGGYSLTRPSRRA
>NZ_CP050177.1|WP_167025032.1|1457189_1458365_-|winged-helix-DNA-binding-domain-containing-protein
MALKADHPVLGTRALNRATLERQFLLRRAVGVSAKDAVGHLLGLQAQNVKPPYFQLAARLADFAPGDLSDLMASREVARLVTMRSTIHTHTADDCLTLRPLLQDAREKELRVFRAGLAGVDLDRLTAFSRDLVEERPRPVKELREALAARWPDADPFALTVAARGLLPLVQTTPRGLWGRAGQVTLTTAEKWFGRPSAPAPAPDDTVLRYLGAFGPASVKDMQVWSGLTRLRDAFERLRPRLLVFQDENGVELFDVPDAPRPDEDTPAPPRFLPEFDNLLLSHADRSRVIPPAYKGRASYGNTAHRALLVDGFLAGIWRLDEGTAGTGRKGPTRTTLTVQLFAPPTREHRAAVTEEAERLLTTMAPADTHDIRFAEFADAPPPSPQSPTSR
>NZ_CP050177.1|WP_167025029.1|1455804_1457211_+|diaminopimelate-decarboxylase
MEQAGATAGATGDGAVPATAETTAKTTTEPLLGIGELSTATVWPASAVVAPGGDIAVAGVSLAELAERYGTPAYVLDEDEVRARARAWRRALPDAEVVYAAKAFLCRAVVDWVEEEGLGLDVCSAGELELAATRGFPADRIVLHGNAKSPQDLRTALRLGVGRIVVDSACEIARIAAQVPGPDPQRVLVRVLPGIEAGAHAKVRTGAEGQKFGLSIADGDAADAVARILGQSPLELAGLHCHLGSQITDAEPYAEAVRRVVAFLADIRDRHGVTLPELDLGGGFAVAYLPGDPAPAPGVYARSITEALAEACARYGLPLPRLTVEPGRSIMAQAGIALYRVLAVKRTGGRVFVAVDGGMSDNPRPALYGARYTVRRVGRASAAPMRTATVVGRHCEAGDVLAEAVELPEDIRAGDVLAVPASGAYQVSMASGYNMTGRPPVIAVSAGRSRLLIRRETFEDLRQRDVGL
>NZ_CP050177.1|WP_167025026.1|1454744_1455587_+|GAF-domain-containing-protein
MTEVVESVELRAALLRLRRTTGLPVAFGGLLHETGRLRIAELTGTASGALRGLAISSGNGLGGKSIALARPFAVTDYRQARHISHEYDAAVAAEGLRSVLAVPVVVQRRVRGVLYGALRTALPIGDRTFDAAAAAARDVEQALVVRDEVRRLLAVTREPAAGPAAWEEVRAAHSELRALAPRIADAETRDHLLAVCARLAGATGATAAPPAERHLPVRLAPRELDVLTCVASGATNAAAAELLGLRPETVKGYLRSSMRKLGAHTRLEAVVAARREGLLP
>NZ_CP050177.1|WP_167025023.1|1452919_1454632_-|AMP-binding-protein
MTAGTPSSPAGPHGRLTPTEEFRTARDFLLAHREDYATAYAGFEWPRPERFNWALDWFDRIAEGNHREALHIVEEDGRRTRVTFAEMSARSDRVANWLRARGVRPEQRVVVMLGNQVELWEIALAAMKLRAVVIPATPLLGPEDLRDRVERGRASHVIVRADDTAKFDGIAGRFTRIAVGPEVPGWLSYGDADAAPARFEPDGPTHGDDPLMLYFTSGTTARPKLVEHTHVSYPVGHLATMYWIGLKPGDVHMNIASPGWAKHAWSNLFAPWNAEATVFIHNYTRFDAGRLMAEMDAAGVTSFCAPPTVWRMLIQSDLSTLRTPPREVVAAGEPLNPEVIETVRRAWGVTVRDGFGQTETAVQVANTPGQLLKAGSMGRPTPGFKVELLDPVSGAPGVAEGEIALVLGAHPVGLMTGYHGAPDLTAAAMAGGYYRTGDIGSRDAEGYITYIGRSDDVFKASDYKISPFELESALLEHEAVAEAAVVPAPDPVRLAVPKAYVVLAEGWEPGPDTAKVLFAHSRSVLAPYQRIRRIEFGELPKTVSGKIRRIELRERTAEGSSAEYDEGDLR
>NZ_CP050177.1|WP_167025020.1|1451270_1452923_-|AMP-binding-protein
MTTTTETTARSGPVAAPAASYLHGTATAPLLGDTVGGNLDRAVAAFPDREALVDVPSGRRWTYAELGADVDALARALLGRGVAKGDRVGIWAVNCPEWMLAQYATARIGAIMVNINPAYRAHEVEFVLNQSGIAVLLASLGHRTSDYRALVDEVRDRCPGLRAVHYIGDPSWDELLAYGREVTASQIASCEAELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGETVAYTEHDRICVPVPFYHCFGMVMGNLAATSHGACVVIPAPSFDPAATLHAVERERCTSLYGVPTMFIAELDLPGFASYDLSSLRTGIMAGSPCPAEVMKRVVAEMNMTEVSICYGMTETSPVSTQTRRDDNLERRTGTVGRALPHIEVKVVDPVTGVTLPRGEAGELCTRGYSVMLGYWNEPERTAEVVDAGRWMHTGDLAVIREDGYAQIVGRIKDMIIRGGENIYPREIEEFLYGHPKVADVQVIGVPDARYGEEIVACVIPRDPADPPSADEVAAYCRERLAHYKVPRRVEIVDAFPMTVSGKVRKIELRERFAA
>NZ_CP050177.1|WP_167025016.1|1450689_1451250_+|TetR/AcrR-family-transcriptional-regulator
MPVQRADARRNYERILAEAEREVAAHGADASLEQIARTVGVGSATVRRHFPGRRALLEAVFRERIEALCARARELAGAPDPRAALLEALHGLAAYATSARGLATALTQDGGAGPEHVNACPAKISDAYDPLLERAARAGAVASDVTTADLVTLISGIALATEHDPDAAARTDRLLRLAVAGISPSG
>NZ_CP050177.1|WP_167025044.1|1464537_1465704_-|XdhC-family-protein
MLDIAEELDRWVRQGRDFAVATVVAVTGSAPRSPGAALAVDSEGTAIGSVSGGCVEGAVYELCAQALRDGEPVLERFGYADEDAFAVGLTCGGVIDILVTPVRAASAGRQVYAAALAAAARGEAAALARVTEGPAELVGRALLVRPDGSYEGGLGGHPELDRTAAGEARALLDAGRTTTFVVGEGGSRCGRPLTLLVESRVPPPRMIVFGAIDFASALARAGKFVGYHVTVCDARPVFATAARFPDADEVVVAWPHRYLESARVDGRTVLCVLTHDVKFDVPLLERALRMPVAFVGAMGSRRTHEDRNARLREVGVTEAELSRLRSPIGLDLGARTPEETALSIVAEVVATRRGGTGTPLTGAHTPIHHDPAPSPPRPAACAPAAGAA
>NZ_CP050177.1|WP_167025047.1|1465777_1467238_-|NCS2-family-permease
MTQSSVRPTTTAEDAGSTGSRPPAGRSGIDRYFEISHRGSTFAREVRGGVTTFMAMAYILLLNPLILSGEDVAGDTLARSALITATALAAALTTLLMGLVGKVPLALAAGLSVSGVLAGQVVPVMTWPQAMAMCVLYGVVICLLVVTGLREMIMNAIPLALKHAITIGIGMFVALIGLVKAGFVHASQGGGPVTLGPAGQLAGWPVLLFCVTLLLIFMLQIRQVPGAILIGIVLGSIAAAVLNATGAVGARAWGSGPPELTGSAVSLPDFSLFGKVDFGGWGDVGAMTVGMIVFTLVLAGFFDAMATIIGVGTEAGLADERGRMPGLSKALFVDGAGGAVGGLAGGSGQTVFVESATGVGEGARTGLASVVTGLLFAACLFFTPLTQLVPGEVAAAALVVIGAMMAQNARHVDWGDRAVAVPVFLTVVLMPFTYSITAGVAAGVISYTALRVAQGKGRETGAFMWGLTAVFVVFYALHPIESWLGV
>NZ_CP050177.1|WP_167025050.1|1467431_1469891_-|molybdopterin-dependent-oxidoreductase
MTSPTRRTGTPRTPTGTPTSLTQGSPTRGGIGESTLRPDGTLKVTGEFAYSSDMWHEDMLWGHTLRSTVAHAEIRSVDISEALAVPGVYAILTYDDLPTEVKHYGLEIQDTPVLAHGKVRHHGEPVAIVAADHPETARRAAARIRIDYAELPVITDEVSATAPGAPLVHEGRDDRPQGPPTGSGPGGTPSSGHVPHPNVVHRQPIVRGDADAAAARADVIVTGDYVFGMQDQAFLGPESGLAVPAEDGGVDLYVATQWLHSDLRQIAPVLGLPDSKVRMTLSGVGGAFGGREDLSMQIHACLLALRTGKPVKMVYNRFESFFGHVHRHPAKLHYEHGATRDGKLTHMRCRIVLDGGAYASASPAVVGNASSLSVGPYVVENVDIEAIALYTNNPPCGAMRGFGAVQACFAYEAQMDKLAAELGLDPVEFRQLNAMEQGTLLPTGQRVDSPAPVAELLRRVKARPLPPEQQWLTAGEAPDVRALPGGLSNTTHGEGVVRGVGYAVGIKNVGFSEGFDDYSTARVRLEVIAGEPVAVVHTAMAEVGQGGVTVHAQIARSELGVAQVTIQPADTRVGSAGSTSASRQTYVTGGAIKNTCEHVREKVLELGRRKFGTYHPAWATAELLLESGKVVTDGGEVLADLADVLEDEVVDLELEWRHRATEAFDLRTGQGNGHVQYSFAAHRAVVEVDTELGLVKVIELAVAQDVGKALNPLSVVGQIQGGSLQGLGVAVMEEIIVDPVTAKVRNPSFTDYLIPTLLDTPTIPVDVLELADEHAPYGLRGIGEAPTLSSTPAILAAIRNATGLELNRTPVRPEHLTGM
>NZ_CP050177.1|WP_167025053.1|1469887_1470466_-|(2Fe-2S)-binding-protein
MRVNFTVNGRRHEADDVWEGESLLYVLRERLGLPGSKNACEQGECGSCTVRLDGVPVCACLVAAGQVEGREVLTVEGLAEYAGQRDRERGDGRGGEGVPGGAPGGVPGGEGVRAGQLSHVQQAFMDAGAVQCGFCTPGLLVAADEMLERNPSPTDADIREALSGNLCRCTGYEAILDAVRLAAARQEEANRR
>NZ_CP050177.1|WP_167025057.1|1470468_1471359_-|xanthine-dehydrogenase-family-protein-subunit-M
MDFLRPATWQEALAAKAEHPSAVPIAGGTDVMVEINFDHRRPEHLLDLNRIGELTTWQIADDHVRLGASVPYAAIMENLRTELPGLALASHTVASPQIRNRGGVGGNLGTASPAGDAHPALLAAGAEVEAESVRGTRLIPIDDFYTGVKRNALAPDELIRAVRVKKADGPQQYSKVGTRNAMVIAVCAFGLALHPDTRTVRTGIGSAAPTPVRARVAEDFLGAALEEGGFWDNGKVITPSVVRQFADLVAAACNPIDDVRGTARYRRHAVGVMARRQLGWTWERYRGAGRTLRGAA
>NZ_CP050177.1|WP_167036317.1|1471682_1473521_+|PucR-family-transcriptional-regulator
MRLRALLETDALGLRLLGGAGELDRGVRGVMTTDLRDPSRYLSGGELVLTGLAWRRAPKDSEPFVRILDAAGVAGLAAGEAELGHIPEDLVTACVRHRLPLFAVREDVAFATITEHVVRQVSGERAGDLAAVVDRHRRLMTSGPAGGGPEVVLGLLSSDLDLRAWVLTPTGRQVAGGGAPLAASRAAALAAEHLAATRSGRRSPYRVTVAGTAYSLFPIGDPGRGASPAAVKDVRETVLSDWLLAVEADAGEWPAERLDLLQGVAQLISVERDRRDASRTVRRRLAQEVVDLVQDGAAPAEIAARLRVAAPVLLPGVGAAPHWQVVVARVEWAGGEERSAHAAGPVAQAVLEEILTDRTPPGTAPGTDLSDRIAVAHADGEAIALVPLAWTATDLGAGASGAGGSEAGAGGTGASKAGAAGGSEASAAGPGASGTGAAAADVAVDHRPGLDAEALLGAVRGTLGAGLGEDGRLTLGVSAAVHSAEGLRGALEEARHARRVAAARPGRVSAAGHHELASHVLLLPFVPDDVRRAFTARLLDPLREYDKRHRAELIPTLEAFLDCDGSWTRCAARLHLHVNTLRYRVGRIEQLTGRDLSRLEDKLDFFLALRMS
>NZ_CP050177.1|WP_167025060.1|1473874_1474651_+|hypothetical-protein
MAHTAMSGSGTTAGDDPLQTAVWRLRSRGCWTDAAALLAPHAADPAPALQRASLLVERCLFTAKGWAEAEDALRVAEATAREDGERGAAACERGHLAYASTVLHVRDRADEARAALSRAAALIHPSAQGRALLDFRRGLFAEHVADSPQSARAAYRRAHAAATAHEETLLLSFTWRHLAGLALREGELAEARHGFGESLRIREELGYLVGTAPALAALADAEPEPEATRLRAEAGRLFRLLGGVPTWLADQLTPPTPV
>NZ_CP050177.1|WP_167025063.1|1474797_1476597_-|ABC-transporter-ATP-binding-protein
MTARQLPVATPRQVRRAALGLIRRDAVAFSALLLLNALAAAAGLVSPWLLGRIVDAVDAGEGTRAVDRYALVIVVCALAQFLLTRQARFVGHRFGERTSARIREQLVDRALALPASAAERAGTGDLAARGAADVPQVSTTLRDAGPDVFIASLQIVFVLGAVFVLDARLGLCGLLGLIGIWCVTRWYLRRAHGGYLAEGAANSAMAEVLSATAAGARTVEALGLRERRIAACHEAVEHCRRTRTRTLFLRSVLFPVVDVSYAVPVVAVLLVGGALLDRGAVPLGTVVACALYLRQLDGPLDTILRWVDQLQSSGASFARIEGLGQEPVTAPGPGPAPAGDLIEVSGARYAYDGGRDVLHGVDLTVRPGERLALVGPSGAGKSTLGRLLAGIDRPHTGAVTVGGVPIAALGPDELRRQVVLVTQEHHVFADTVRDNLLIAAPAATDDELFAALRAVGADWVGELPGGLDTGLGAGGTPTDGARSQQLALARVVLADPHTLILDEATALLDPATARHTERALAAVLEGRTVIAIAHRLHTARDADRVAVLDGGRLTELGTHEELVAREGAYAALWRSWHGEPPTRTPHPRPPGDRSDSITL
>NZ_CP050177.1|WP_167025066.1|1476593_1478336_-|ABC-transporter-ATP-binding-protein
MPDTPVDPGTPADPGSPDRRGPLRYLWWLVCAQRGRVLAGALFGSLWMIGLALSPYLLSRAVDDGLRAGDRTALAGWTGALFALGAANAWVGLMRHRTMTRVRMDATFRTVRVVVAHATRLGAALPRQASAGEVVTIGIGDVAAISWSMTVTGPGIGAVLAYLVVAALLLAVSPLLALVVLLGVPLLALAVGPLLGRLQGAEGAYREQQGALAGRFVDIVGGLRVLSGLGGKDVHAARYRRDSERLREEGYRVGSVTSWIDALGPGLPALFLAAVTWLAARMAAQGTISVGELVAVYGYVAVLVVPVAFFVEGGYQVTRGMVAARRVVRFLGLERDLVDAADAVDAPRGPAVLHDPASGVEVTPGTLTVLVGARPADCAAVVDRLARFAGSDATWGGTRLDVTALPQVRERILVADNEADLFAGTLRDVLAGREDRDEQALTRALFTAAAQDIVLGLPDGADSAIDAGGRNLSGGQRQRLRLARALLADPEVLLAVEPTSAVDTHTEAAVAARLRAARQGRTTLVTSTSPLLLAQADTVCFLTDGRVTAVGTHQELLRGDSGYRAVVSRGSDAYVERKTP
>NZ_CP050177.1|WP_167025069.1|1478662_1479835_+|ATP-binding-protein
MTQYFQDPALWGLIAGTPVAATAIIRGRKSVAELRKEKEELKRHYANLEDHYAEAVEEAKDRAEEATKTALKSAMRTLQGLASEQQLAITKIQDKYGELQILQDLLDIDHMNSQFARRAQSIAVLCDGWLGRQRAAASLYDVVRSAKGRIRHFTRVEIRAQSNFAIVSRAVEPVALTLAELLDNATSYSAPETMIEINIRPVPKGVCIVVDDAGVGMNEEEKARAAKLLSSDRAPGVSGLGNPPQFGFTVIGVLAARYGFSVSVDSTSPYGGVRAVVLLPDDLLTSMPEPEEIPAVAASSPRSSPLPSEQEATDDDTSFADSPAAPSTTFGGLPKRRRRGAISIVPTAGGAPEAPARDSEKAASVMGAFQRGTQSGRRSTNTSSEGHEAQ

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Crispr_ID: NZ_CP050177_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_3

1502595-1502703

Orphan

Consensus_repeat	Method
GATCACCCGGCCGGGACCGGTCCCGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_3

>merge|NZ_CP050177|3|1502595-1502703|CRISPRCasFinder
GATCACCCGGCCGGGACCGGTCCCGCGACCCGGACGACCGTACGACCCGGATTGCGGAGCCGGGATCGGCAGTACGGCCCCGATCACCCCGCCGGGACCGGTCCCGCGA

>NZ_CP050177|3|3|1502595-1502703|CRISPRCasFinder
GATCACCCGGCCGGGACCGGTCCCGCGA	CCCGGACGACCGTACGACCCGGATTGCGGAGCCGGGATCGGCAGTACGGCCCC
GATCACCCCGCCGGGACCGGTCCCGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167036323.1\|1496708_1497155_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167025114.1\|1497544_1499602_+\|phospholipase-C,-phosphocholine-specific	unknown	unknown	gnl\|CDD\|274561
NZ_CP050177.1\|WP_167025140.1\|1509666_1511334_+\|DNA-alkylation-response-protein	unknown	unknown	gnl\|CDD\|183199
NZ_CP050177.1\|WP_167025143.1\|1511518_1512814_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225822
NZ_CP050177.1\|WP_167036329.1\|1501571_1501898_-\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876
NZ_CP050177.1\|WP_167025146.1\|1512867_1513434_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP050177.1\|WP_167036326.1\|1499701_1501432_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471
NZ_CP050177.1\|WP_167025132.1\|1507312_1507705_+\|glyoxalase	unknown	unknown	gnl\|CDD\|319901
NZ_CP050177.1\|WP_167025123.1\|1504270_1505179_+\|S1-family-peptidase	unknown	unknown	gnl\|CDD\|365866
NZ_CP050177.1\|WP_167025105.1\|1494324_1494807_+\|DUF456-domain-containing-protein	unknown	unknown	gnl\|CDD\|377293
NZ_CP050177.1\|WP_167025102.1\|1493247_1494240_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224296
NZ_CP050177.1\|WP_167025134.1\|1507644_1508382_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP050177.1\|WP_167025117.1\|1502076_1502541_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP050177.1\|WP_167025126.1\|1505282_1506401_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP050177.1\|WP_167025129.1\|1506409_1507180_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP050177.1\|WP_167025120.1\|1502863_1503481_-\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP050177.1\|WP_167025108.1\|1494834_1495200_+\|PPOX-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274925
NZ_CP050177.1\|WP_167025137.1\|1508440_1509649_-\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|377085
NZ_CP050177.1\|WP_167025111.1\|1495264_1496422_-\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|234988
NZ_CP050177.1\|WP_167025100.1\|1490422_1492813_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167025114.1\|1497544_1499602_+\|phospholipase-C,-phosphocholine-specific	gnl\|CDD\|274561	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream. [Cellular processes, Pathogenesis].	0
NZ_CP050177.1\|WP_167025140.1\|1509666_1511334_+\|DNA-alkylation-response-protein	gnl\|CDD\|183199	PRK11561, PRK11561, isovaleryl CoA dehydrogenase; Provisional.	2.95237e-171
NZ_CP050177.1\|WP_167025143.1\|1511518_1512814_+\|GAF-domain-containing-protein	gnl\|CDD\|225822	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].	1.27251e-33
NZ_CP050177.1\|WP_167036329.1\|1501571_1501898_-\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	3.61211e-05
NZ_CP050177.1\|WP_167025146.1\|1512867_1513434_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.29957e-10
NZ_CP050177.1\|WP_167036326.1\|1499701_1501432_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP050177.1\|WP_167025132.1\|1507312_1507705_+\|glyoxalase	gnl\|CDD\|319901	cd07235, MRD, Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.	3.94868e-58
NZ_CP050177.1\|WP_167025123.1\|1504270_1505179_+\|S1-family-peptidase	gnl\|CDD\|365866	pfam00089, Trypsin, Trypsin.	1.10144e-07
NZ_CP050177.1\|WP_167025105.1\|1494324_1494807_+\|DUF456-domain-containing-protein	gnl\|CDD\|377293	pfam04306, DUF456, Protein of unknown function (DUF456). This family is a putative membrane protein that contains glycine zipper motifs.	3.72988e-17
NZ_CP050177.1\|WP_167025102.1\|1493247_1494240_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224296	COG1378, COG1378, Predicted transcriptional regulators [Transcription].	3.59127e-10
NZ_CP050177.1\|WP_167025134.1\|1507644_1508382_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	3.53547e-10
NZ_CP050177.1\|WP_167025117.1\|1502076_1502541_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.67331e-10
NZ_CP050177.1\|WP_167025126.1\|1505282_1506401_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.91598e-48
NZ_CP050177.1\|WP_167025129.1\|1506409_1507180_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.58343e-96
NZ_CP050177.1\|WP_167025120.1\|1502863_1503481_-\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	4.78402e-46
NZ_CP050177.1\|WP_167025108.1\|1494834_1495200_+\|PPOX-class-F420-dependent-oxidoreductase	gnl\|CDD\|274925	TIGR04023, Pyridoxamine_5'-phosphate_oxidase, PPOX class F420-dependent enzyme, MSMEG_5819/OxyR family. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. This subfamily within the PPOX family occurs in at least 19 distinct species of F420 producers and is likely to bind F420 rather than FMN. The member OxyR was shown to use F420 to catalyze a C5a-C11a reduction in oxytetracycline biosynthesis. [Unknown function, Enzymes of unknown specificity].	7.62991e-58
NZ_CP050177.1\|WP_167025137.1\|1508440_1509649_-\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	2.90118e-41
NZ_CP050177.1\|WP_167025111.1\|1495264_1496422_-\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|234988	PRK01889, PRK01889, GTPase RsgA; Reviewed.	3.10245e-179
NZ_CP050177.1\|WP_167025100.1\|1490422_1492813_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	3.92372e-21

>NZ_CP050177.1|WP_167025117.1|1502076_1502541_+|MarR-family-transcriptional-regulator
MTEPRWLDETEARVWRAYLEVRRDLSATLSRRLTQEAGLTEADYALLVPLSEAPDGLLRARELSVLADWERSRLSHQITRMEKRGLVAREECPTDARGAMVRLTASGRAAIEAAAPGHVEAVRTYFFDALAPDEVELLDGLLRRILDGLPRDRG
>NZ_CP050177.1|WP_167036329.1|1501571_1501898_-|DUF1232-domain-containing-protein
MILIAVGVVLALITLGGALTLAVRLVRARRALRAAGVPERRKWVFWAAIGYLILPTDLVPDPVYLDDIGVLLLALRSIRSDGAKGRYALQAARAAGRLGRAKDVRTPR
>NZ_CP050177.1|WP_167036326.1|1499701_1501432_-|glycoside-hydrolase-family-13-protein
MPDVSADGQDRTGSGRTPAGPAEDRRPLPGGPRRDWWRESVVYQVYVPSFADADGDGMGDLRGITDRLAHVADLGADAVWLTPFYPSPLADGGYDVADYRGVDPRHGTLDDFRALLARARELGLRTIVDIVPNHCSDQHPWFTEALAAAPGSAARDRFIFREGTGPDGAEPPADWQSKFGGPAWTRVPDGQWYMHIFASEQPDLNWDNPEVAADFEDTLRFWLDLGVDGFRIDVAHGLRKDLVPPLRDTRGGDTAPLNSPPAGLNHPFWDRDEVHDIYRVWRKITDGYAPPRIMVAEAGVSAARLPLYTRPDELHQAFNFFHLRCPWRAAAFRDVIDTSLADAATTGSLPTWVLSNHDVVRHRTRYGLPEGTDLRAWVTGDGRDPAADDVRGRRRARAAALLTLALPGTTYLYQGEELGLPEVADLPAASLRDPMWERTGHGQKGRDGCRVPLPWTREGSSYGFGAGGSWLPQPEGWGDRSVEAQTGRAGSFLELYRTALALRRGFLGDESFTWLPSAPGELAFRKGAGLVCRVNLSDEPVPLAPPAGAEPLLASEALPAGQLPPDTAVWFRSAGE
>NZ_CP050177.1|WP_167025114.1|1497544_1499602_+|phospholipase-C,-phosphocholine-specific
MPELNRRRFLQVAGATAGFSGLSNSIDRAAAIPATRRSGTIQDVEHIVVLMQENRSFDHYFGSLRGVRGFGDPRPVTPVGGRSVWHQSDGTKDVLPYRPDAEDLGMQFIEGLDHDWAGGHQAWNQGRYDQWIPAKSAGTMAHLTREDIPFHYGLADAFTVCDAYHCSFIGATDPNRYYMWTGHVGNDGKGGGPVLGNDELGYDWTTYPERLEAARVSWKIYQDVGDGLDAAGGWGWIDDAYRGNYGDNSLLYFNQYRNAEPGDPLYDKARTGTNAKAGDGFFDLLRADVKADRLPQVSWIAAPEAFSEHPNWPANYGAWYISQVLDALTSNPEVWSKTALFITYDENDGYFDHAVPPFPPASAAQGLSTVDTTLDHFPGDSRHAAGPYGLGQRVPMLVVSPWSTGGYVCSEVFDHTSIIRFMERRFGVSEPNISPWRRAICGDLTSAFDFSLKNTRPARLPGTDGYEPPDQDRHPSYVPVPPGRPVLPKQEKGSRPTRPLPYAPFADGSGTPGTGRFTLTFSGGEEAGAAFTVTSANRTDGPWTYTAAAGERLSDTWNTAYSKGAYDLSVFGPNGFLRTFQGSGTVAGPEVTARHDARRGRVELTLRNTGRHDCRLTLTDAYGGKSETVKVRAGGQVVHTVDTKHGKRWYDVSVTADTDAAFLRRLAGHVETGEPGVSDPAIITG
>NZ_CP050177.1|WP_167036323.1|1496708_1497155_-|hypothetical-protein
MDLSDDLGEDLFDDEEPVVISGIDGSWTWAWEQGGVHGLDERIVSRVSAGTEAVVLHYNEKPMHWFKYAVGGEVIVDFHTLQAIEPAGQDPAGLDDAMRPLGLVPGQVAPLHSVLALVENAFGIRLRPPGDADDERWSGRLLPLPDTA
>NZ_CP050177.1|WP_167025111.1|1495264_1496422_-|ribosome-small-subunit-dependent-GTPase-A
MSFSFASSEAASSHPLAPYGWDADWEAEFTPYAERGLVPGRVVRVDRGMCDVVTPAGPVRADTEYVVPRDPMRIVCTGDWAALDADGDPRFVRTLLPRRTAFVRSTSSKRSEGQVLATNVDHIVICVSLAVELDLGRIERFLALAMSSSTGAALLRGSASAPESEAAPLIVLTKADLVADPVVLAHLVTDVEAAAPGVPVLAVSAETGEGIEVLSAVVSDGTSVLLGVSGAGKSTLANALYGGPLMEVQAIRDVDGKGRHTTTTRNLIVLPAGGVLIDTPGLRGVGLYDAESGVGQVFSEIEELAAECRFHNCAHGTEPGCAVLAALADGSLSDRRLESYRKLLRENQRIVAKTDARLRAEIRRDWKRMGAEGRAAMEAKRGKFR
>NZ_CP050177.1|WP_167025108.1|1494834_1495200_+|PPOX-class-F420-dependent-oxidoreductase
MTEFSDAERAYLRTQRLGRLATVDPRGQPQANPVGFHPQDDGTILVGGYALGTTKKWRNLTANPRVALVVDDIVSVTPWKVRGVDIRGEAELLTGPHDLGPHFSEELIRIHPRKIHSWGLD
>NZ_CP050177.1|WP_167025105.1|1494324_1494807_+|DUF456-domain-containing-protein
MDVWQLVLVGLVMLLGLFGVLIPGVPGQAIVWAAVLWWALADTTHAAWVVLIGATVLLLLNQALRPLLPSRRRTRTGAPRRTVLVGGTTAIVAFFVVPVIGGILGFVGGIYGAERIRLGSHRDGWASTRTVMRTAGYPLLVELFACLLVVGAWIGALILG
>NZ_CP050177.1|WP_167025102.1|1493247_1494240_+|helix-turn-helix-transcriptional-regulator
MLGAIGLDERQESAYRALVAIGAADVPDLAHRLALPEADTERALRRLERQGLAAQSSARTGRWVAAPPAVALGALLTQHRHELEQAELAAVLLAEEYRAEAREPAVHDLVEVVTGASAVAHRFVQLQLGATSEVCALVTGKPVAVTGMDNEAEERAATRGVAYRVVIEREVLAAPTGVTELSAALGRDEQVRVTERVPTKLVVADRNLAMVPLTGRGAEPAALVVHASGLLESLTGLFEAVWRDALPLRLGSGDEILEDAPPGPDSTDLEVLSLLLAGMTDASVAKQLDLGLRTVQRRVKGLMELSGVTTRLQLGWHAYEKGWVAREPRA
>NZ_CP050177.1|WP_167025100.1|1490422_1492813_-|hypothetical-protein
MSEQGERPDADDWWNRLYDDSARDMGEGDALDDHFASAVDAVASPETRRPRAWWEQQPPPYAPTDTKPLPPPPDPATPTPWTPPPPEALPPPEPRQTPEPSSTPEPRQPPEPLSTPEPPPTSTPPPTRQSPPGPRVEPGRPWGPPPEPEPRLASPRPLADAVPPAAGPAETTRRPDVDPAGAEPPSDADANTRSSAEASSTSPGPMAPSGAEAWPDGVRPPAEAPRAAPGAAWGPAAPAGKSDAGVVPPRPSDAPTRPTTAPTPPAPARPVASPRPEGPNSAPAGEDGPLGPYAPPATGPAPAGPQPAPPVTDAGLAGPPAPPAGGRQPSGPRAAPAAPEGPRTLPDGPELAPPAAGSAPTAGPPAPPAGGPRPSGPRAAPAAPEGPRTLPDGPELALPAVGGAPAPPPPRPRDIPAAAHGNDPRVGDRPHAPVRAVGWGERGDGGADGGSVMARAAAGRDSAEEFPGEGRPGVAYLGGGPPTYDPDPTALPPAHPDRLGELVADTVLDGARYGTYTLRAASVRGDSARYRGEPRRDTLLTARFGEGDTALILVAVATGVRATEGAHLAAADACHWIGGAVGRSHARLSDDIRAGRRGDLKAGLQRLTDRGYGKLRARAAELDLPPDAYTASLRCLLLPADPACRTRVFFGVGGGGLLRLRDGAWQDLEPDVPDPAALTGDPVVGFGSRPAEPPRGERLTMDLGIPTPPAPYVEKPVPPQAEPFRFRASVAQPGDTLLLCSPGLAEPLRGVPALAAELAERWASAEPPGLASYLADTQLRVKGYADDRTAVAVWEA
>NZ_CP050177.1|WP_167025120.1|1502863_1503481_-|NAD(P)H:quinone-oxidoreductase
MTDPVKLAVIHYSATGTNAEVAKTLAEAAEKAGAEVRLRRVAELAPQAAIDSNPAWAAHQAATADLAVATPDDVDWADAVIFGGPTRFGNVAAQLKQFIDTLGGLWGQGRLADKVYSGFVSSATRHGGQESTLLALYNSVHHFGGIVVAPGYTDPSKFADGNPYGTSHVDAQGTNPVGDETRQAARVQAERVVRIAAALKAGKAA
>NZ_CP050177.1|WP_167025123.1|1504270_1505179_+|S1-family-peptidase
MTFKRLSPLGSISRRARLLAVASGLVTVAALAAPTATAQPAPVASLATQLAEATAGVTDAAVVGSAWYTDTASGKVVVTVDSTVSAGEIAEIKNSVPDESKLAIKKTPGSFSPLIAGGEAIYAGGSRCSLGFNVRSGSTYYALTAGHCTNIATTWYTNSAGTALLGTRTGTSFPGNDYGIIRHANAANADGRVYLYNGSYQDITSAANATVGQRVTRSGSTTGVRTGTVQGLNATVQYPQGTVSGLIQTNVCAQPGDSGGSLFAGSVALGLTSGGSGNCTSGGTTFFQPVTEALSVYGVSVF
>NZ_CP050177.1|WP_167025126.1|1505282_1506401_-|HAMP-domain-containing-histidine-kinase
MTDMLLIALYAFLGAAVAALLGAVVLRLLRHRSVLVSLTVVAAVTVVAMLGGTLAVAWAMFLSTHDLSVVTTVAAMAAVVSLATAVLLGRWVVARSHDLALAARSFGDGGSFAAPDGDSTAELSELGRELAVTSAKLAASRERERALETSRRELVAWISHDLRTPLAGLRAMSEALEDGVVQDPDRYFRQIRAEVERLNSMVGDLFELSRIHAGALALAPTRMSVYDLVGEALAGVDPLAREHGVRLVGGSIEAVPVEVDGKEMTRVLANLLVNAIHRTPADGTVAVAAERRADSVVLSVTDGCGGIPAEDLPRVFDTGWRGTQARTPPAGAGLGLAIVRGIVEAHAGRTAVHNVTGGCRFEVTLPAAATLG
>NZ_CP050177.1|WP_167025129.1|1506409_1507180_-|response-regulator-transcription-factor
MHTILVVDDDPTVAEVVTGYLERAGFAVDRAADGPQALRLAAGKPPSLVLLDLMLPGMDGLEVCRRLRAAGPVPVIMLTARGDEDDRILGLEIGADDYVTKPFSPRELVLRVESVLRRGRPDRGDRAGPELTAAGITLDPAARRVTKDGRVLSLTLREFDLLAHLMRHPGQAIAREQLMNDVWGWEFGDLSTVTVHVRRLRGKVEDDPAAPRLIRTVWGVGYRFDVPVGEPPAPAPAGPEAPMTSATPAPVPPDGS
>NZ_CP050177.1|WP_167025132.1|1507312_1507705_+|glyoxalase
MTPRLDATSLVVSDLAASLAFYRLLGLDIPAGADTAPHVEVLLPGGTRLLWDTEDTVRSFDPGFTAPGAGGRVGLAFLCDSPAEVDATYAALTAAGHRGHLEPWDAVWGQRYAVVLDPDGCEVSLFASAA
>NZ_CP050177.1|WP_167025134.1|1507644_1508382_-|helix-turn-helix-domain-containing-protein
MYEERASRVDGAVVWTKTTTGAPGTTPYPVLPDGCMDLLWLGGRLLVAGPDTRAHHPTVPGPGCAGVRFAPGTAPALLGVPAHELRDRRVELADLWPSAEVRRLTARLEAAPDPAAALEAVAVRRAAAAPALDPLLRAVVAGLDAGRTVAATADAVGLGVRRLHRRSLDAFGYGPKTLARVLRLQRALGLVRAGLPYAAAATAAGCADQAHLARETRELAGLTLGAYAALAKSETSQPSGSRTTA
>NZ_CP050177.1|WP_167025137.1|1508440_1509649_-|YihY/virulence-factor-BrkB-family-protein
MQAANETPERPAGRLHRARVLYRNVSMRRMAWLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGLIGLLVYVDDWTSANTVASIENNILSAVGTVLSDRGVNQIAKPLLASVTHGRPDVVSLGFAIALWSGSRAVNVFVDTITVMYGLDGRRGIVATRLLAFLLYLVALLIGAVVLPLAVVGPDRVVEIVPWGTEVVSILYWPVVSLLSIAFLTTLYHVSVPARSRWIEDVPGALVALGMWVLGSFLLRIYLTSTVEGPTIYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDRVWPSLATAAARAANERLRTAHAAELLARAAAESELRRARGEYDYFDDEDDNDGDDGGDLGMPSEFPERWSRFLPPDDLRSRLHSGRESRENKGLRESRERDQRS
>NZ_CP050177.1|WP_167025140.1|1509666_1511334_+|DNA-alkylation-response-protein
MAATTHTVTNQVPPLVGYDVFSADRALTEGVERHVAAALLDEAGAELTALGRSAGSAELQLLGTLANENPPRLRTHDRYGNRVDEVDFHPAWHQLLGQAVASGLTDAWGRPAGHMRRAAGLLVWGQVEAGNTCPLSMTHAAVPALRVEPALAADWEPRLTSRVYDPELRPAGEKSGVLFGMGMTEKQGGSDVRANTTRARRVDTGTGAGDEYLLTGHKWFCSAPMCDGFLVLAQAPDGLTCFLVPRVLPDGTRNVFRIQRLKDKLGNRSNASSEVEFDETWARRVGDEGRGVRTIIEMVAATRLDCVVGSAAVMRQSVAQAVHHATYRRAFGGELIDKPLMVNVLADLALESEAATTLALRLAAAYDTVQDGPEGERDRERAFLRLAVPVAKYWVTKRCTPTVAEALECLGGNGYVEESGMPRLLREAPLNSIWEGSGNVQALDVLRALQREPAALNAFLQEVGLARGADHRLDRAIKDLLTELADLTGIEARARRLVERMALVLQGSLLVRWAPPEVADAFCASRLGGDWGSAFGTLPHTLDLASVVDRARPEA
>NZ_CP050177.1|WP_167025143.1|1511518_1512814_+|GAF-domain-containing-protein
MKDIPLDLARLIAVDGAQATRLLHRVREAALAGERPPVPPRPVIDASWRRMARMGLDPDRTTRSVLLERDELEHRRRTTALGETLRTLVDSLTEMADASLQIMVVTDDEGRVLWRDGSPSVLRQATGIWLEEGAAWTEGATGTNAIGTALAVRRPVRVHSAEHFVHTLHAWTCAAAPVHDPRDGRLLGVVDVSGPASGFHPTTLALVKSVARLAESDLRERHRGTVERLRSVASPLLCRIGGRALAVDSHGWTAAVTGMPPVDRLPLPKSFGAGRVWHPTLGLCAVEPLPGGWLIQVVEDPDPASAAAVSRVVLDLSRPRRWSVAVSGAAGSWVQELTPRHAELLYVLAVRREGRSAAELAADVFGDATRTVTVRAEMSRVRRHLSGVLAHRPYRFREEVEVEVVTPAAPEELLPHSTAPAVLSTRSLPCP
>NZ_CP050177.1|WP_167025146.1|1512867_1513434_+|GNAT-family-N-acetyltransferase
MTLTVTTWSLEQTSPSDLRPAAPPAGDVRIVRAKVPSPEFSRFLYTAVGGDVRWTDRLPYTYARWREYLERPGIETWVAYEKGTPAGFLELAAQDGGVVEIVYFGLIPSFRGRRIGGHLLSYGTARAWDLAERHPGVEPTGRVWLHTCTKDGEHARANYVRRGFRLFDTKTWDEEETATPGPWPGALV

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Crispr_ID: NZ_CP050177_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_4

1632434-1632582

Orphan

Consensus_repeat	Method
GCGCGACTCAAAGCTGTCCTCAATCGCCGGACGGGCTTGATGTGGC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP050177_4

>merge|NZ_CP050177|4|1632434-1632582|PILER-CR
CTGTCCTCAATCGCCGGACGGGCTCCGGGGCCGGTGGGCCGCGCGACTCAAAGACGTCCTCAATCGCCGGACGGGCTTGATGTGGCTCGCCCCCGATGCCAGGCGCGGCTCAAAGCTGTCCTCAAACGCCGGACGGGCTTGATGTGGCC

>NZ_CP050177|4|1|1632434-1632582|PILER-CR
CTGTCCTCAATCGCCGGACGGGCTCCGGGGCCGGTGGGCCGCGCGACT	CAAAGACGTCCTCAA
TCGCCGGACGGGCTTGATGTGGCTCGCCCCCGATGCCAGGCGCGGCTC	AAAGCTGTCCTCAAAC
GCCGGACGGGCTTGATGTGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167025397.1\|1644511_1645300_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP050177.1\|WP_167025375.1\|1641096_1643010_-\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|183601
NZ_CP050177.1\|WP_167025349.1\|1626803_1628183_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181958
NZ_CP050177.1\|WP_167036351.1\|1645513_1646614_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380650
NZ_CP050177.1\|WP_167025334.1\|1617403_1618603_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|274856
NZ_CP050177.1\|WP_167025394.1\|1643207_1644515_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226669
NZ_CP050177.1\|WP_167025337.1\|1618789_1622149_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|163057
NZ_CP050177.1\|WP_167025346.1\|1625672_1626740_+\|DUF4349-domain-containing-protein	unknown	unknown	gnl\|CDD\|379526
NZ_CP050177.1\|WP_167025359.1\|1631154_1632423_+\|ribonuclease-D	unknown	unknown	gnl\|CDD\|223426
NZ_CP050177.1\|WP_167025362.1\|1633994_1636121_+\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236864
NZ_CP050177.1\|WP_167025372.1\|1637805_1639374_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224720
NZ_CP050177.1\|WP_161312622.1\|1630314_1630974_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP050177.1\|WP_167025368.1\|1637385_1637781_+\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350227
NZ_CP050177.1\|WP_167025356.1\|1629364_1630054_+\|DUF3000-domain-containing-protein	unknown	unknown	gnl\|CDD\|378665
NZ_CP050177.1\|WP_167025343.1\|1624122_1625565_-\|protoporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|237009
NZ_CP050177.1\|WP_167025340.1\|1623401_1624118_-\|chlorite-dismutase-family-protein	unknown	unknown	gnl\|CDD\|377705
NZ_CP050177.1\|WP_167036348.1\|1639393_1640854_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP050177.1\|WP_161312348.1\|1632777_1633998_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|273881
NZ_CP050177.1\|WP_167025365.1\|1636184_1637225_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167025353.1\|1628208_1629273_-\|uroporphyrinogen-decarboxylase	unknown	unknown	gnl\|CDD\|234644

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167025397.1\|1644511_1645300_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	4.78472e-99
NZ_CP050177.1\|WP_167025375.1\|1641096_1643010_-\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|183601	PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_CP050177.1\|WP_167025349.1\|1626803_1628183_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|181958	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed.	1.70716e-125
NZ_CP050177.1\|WP_167036351.1\|1645513_1646614_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380650	cd19995, PBP1_ABC_xylose_binding-like, periplasmic xylose-like sugar-binding component of the ABC-type transport systems. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.	5.5826e-116
NZ_CP050177.1\|WP_167025334.1\|1617403_1618603_-\|S8-family-serine-peptidase	gnl\|CDD\|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	5.42423e-47
NZ_CP050177.1\|WP_167025394.1\|1643207_1644515_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226669	COG4214, XylH, ABC-type xylose transport system, permease component [Carbohydrate transport and metabolism].	1.48897e-83
NZ_CP050177.1\|WP_167025337.1\|1618789_1622149_+\|AAA-family-ATPase	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	4.48483e-83
NZ_CP050177.1\|WP_167025346.1\|1625672_1626740_+\|DUF4349-domain-containing-protein	gnl\|CDD\|379526	pfam14257, DUF4349, Domain of unknown function (DUF4349). This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 282 and 353 amino acids in length. There is a single completely conserved residue D that may be functionally important.	1.65902e-68
NZ_CP050177.1\|WP_167025359.1\|1631154_1632423_+\|ribonuclease-D	gnl\|CDD\|223426	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis].	4.20858e-88
NZ_CP050177.1\|WP_167025362.1\|1633994_1636121_+\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|236864	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ.	2.72272e-109
NZ_CP050177.1\|WP_167025372.1\|1637805_1639374_-\|glycosyltransferase	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.20447e-16
NZ_CP050177.1\|WP_161312622.1\|1630314_1630974_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.33021e-23
NZ_CP050177.1\|WP_167025368.1\|1637385_1637781_+\|NYN-domain-containing-protein	gnl\|CDD\|350227	cd09879, PIN_VapC_AF0591-like, VapC-like PIN domain of Archaeoglobus fulgidus AF0591 protein and other similar archaeal homologs. PIN (PilT N terminus) domain of Archaeoglobus fulgidus AF0591 protein and other similar uncharacterized archaeal homologs are included in this family. This subgroup belongs to the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. PIN domains within this subgroup contain four of these highly conserved putative metal-binding, active site residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons. Matelska et al. recently classified PIN-like domains and included distant subgroups, this subgroup includes some sequences belonging to one of these, PIN_14.	2.95937e-07
NZ_CP050177.1\|WP_167025356.1\|1629364_1630054_+\|DUF3000-domain-containing-protein	gnl\|CDD\|378665	pfam11452, DUF3000, Protein of unknown function (DUF3000). This is a bacterial family of uncharacterized proteins.	3.30155e-91
NZ_CP050177.1\|WP_167025343.1\|1624122_1625565_-\|protoporphyrinogen-oxidase	gnl\|CDD\|237009	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed.	3.0799e-144
NZ_CP050177.1\|WP_167025340.1\|1623401_1624118_-\|chlorite-dismutase-family-protein	gnl\|CDD\|377705	pfam06778, Chlor_dismutase, Chlorite dismutase. This family contains chlorite dismutase enzymes of bacterial and archaeal origin. This enzyme catalyzes the disproportionation of chlorite into chloride and oxygen. Note that many family members are hypothetical proteins.	1.78113e-100
NZ_CP050177.1\|WP_167036348.1\|1639393_1640854_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.70272e-128
NZ_CP050177.1\|WP_161312348.1\|1632777_1633998_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|273881	TIGR01930, 3-ketoacyl-CoA_thiolase, acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation. [Fatty acid and phospholipid metabolism, Other].	2.249e-159
NZ_CP050177.1\|WP_167025353.1\|1628208_1629273_-\|uroporphyrinogen-decarboxylase	gnl\|CDD\|234644	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated.	0

>NZ_CP050177.1|WP_167025359.1|1631154_1632423_+|ribonuclease-D
MTDAQETAADPALRTTGGAPPDDVETAPIPLLEPREGIPPVVETDDALARVIAAFAAGTGPVAVDAERASGYRYGQRAYLVQLRRAGAGTALIDPVGCPDLSGLGEALGDAEWILHAATQDLPCLREIGMTPTRLFDTELAGRLAGFPRVGLGAMVENVLGFALEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKLDWAHQEFDAIASAPPAPPRKDPWRRTSGMHKVRRRRQMAAVRELWNTRDSVAQRRDVSPGKVLSDTAIVEASLALPVNVHALTALPGFGHRMGRRQLEQWQAAVDRAKSLPDSELPQPGQPVSGPPPPRSWADKDPEAAARLSAARAAVSAQAERLNMPQENLITPDTVRRVCWEPPSDPTPDAVATALLHHGARPWQVHQVAPALSQALTP
>NZ_CP050177.1|WP_161312622.1|1630314_1630974_+|response-regulator-transcription-factor
MSVLLEQPASLVAYRPNKPTAMVVVADPRVRSTVTRHLWALGVRDVIEASSIAEARPRVGNPRDICVADVHLPDGSGLTLLSETRAAGWPNGLALSAADDIGAVRNALAGGVKGYVVTGTRTNIGHPTRPGAAPIGAGPRMHRRPPGAPSHPGGYRELSGREVEVLRLVAEGQSNKAIGVSMGLSALTVKSHLARIARKLGTGDRAGMVAVALRTGIIH
>NZ_CP050177.1|WP_167025356.1|1629364_1630054_+|DUF3000-domain-containing-protein
MAAAQGQFSDHSNGTEGTGGRDGEGEGDGVPRAFRQAVEALRTARLRPEIEIDPTPPPKRLAPHAYALEAAVVDGEDDLADGRLVLLHDPSGHDAWQGTFRLVTLVRAELEPEMAADPLLPEVCWSWLTGALEARGLSYGEASGTVTRAGSHYFGGLSERRPATQIEIRASWTPREGRGGVPDTAAHLAGWCDLLCQLAGLPPVGPGPAHGGPDAGVVSLPQRRGPQVS
>NZ_CP050177.1|WP_167025353.1|1628208_1629273_-|uroporphyrinogen-decarboxylase
MSAMERPSGQQPTTYDSAFMKACRREPVPHTPVWFMRQAGRSLPEFLKAREGIPMLESCTRPELVAEITLQPVRRHQVDAAVYYSDIVVPLKAIGIDLDIKPGVGPVIADPIRTRADLARLRDLTPEDVSYVTEAIGLLTAELGDTPLIGFAGAPFTLASYLIEGGPSRTYERTKAMMYGDPDLWADLVDRLAAITSAFLKVQIEAGASAVQVFDSWAGALAPKDYRRYVMPASVKVFEAVAPYGVPRIHFGVGTGELLGLMGEAGADVVGVDWRVPLDEAARRVGPGKALQGNLDPTVLFAPTEVVETKAREVLDAAAGLEGHVFNLGHGVMPSTDPDSLTRLVDYVHTQTAR
>NZ_CP050177.1|WP_167025349.1|1626803_1628183_+|FAD-dependent-oxidoreductase
MAAERMVVIGGDAAGMSAASQARRLKGPDRLEITAFERGHFTSYSACGIPYWVSGDVSGPDALIARTPEEHRERAIDLRTRTEVVEIDVPGGRVRARDLATGTESWTGYDHLVIGTGARPVRPPLPGIDAPGVYGVQTLDDGQALLDTLAGRDGGRAVVVGAGYIGVEMAEALLRRGYEVTVVHRDDEPMATLDPDMGRLVRTAMDGLGITTVGGATLTAILTGEDGRARAVATEDATYPADLVILGMGVRPETTLARAAGLPLGAYGGLLTDLSMRVRGHENVWAGGDCVEVLDLVSGATRHLALGTHANKHGQVIGANVGGGYATFPGVVGTAVSKVCDLEIARTGLREKDARRAGLRFVTATVESTDSAGYYPGATPMTVKMLAERRTGRLLGTQIVGRRGAAKRVDIAAVALTAGMTVERMTTLDLGYAPPFSPVWDPVLVAARKAVTAVRAAGM
>NZ_CP050177.1|WP_167025346.1|1625672_1626740_+|DUF4349-domain-containing-protein
MIQGGLMRKMSALAAALLTVSLALAGCGAGGGNDLMSQSKSDDGGQAADRPGPGGEGAVAEAPATAAKDPGNAVPAVTHVIRTAQLAVEVKDARKALATARSVVLGAGGLVEKESTERVEDDHVSTTVVLRVPQEAYDGVLRELAGTGKLLSRTASAKDVTDEVVDVESRVASQRVSVARVRELMDQATKLSDVVQLEGELSRRQADLESLLARQSSLKNRTTLATVTLDLTEVPLEKGDGSDDDPTFLDALGGGWDAFVSTLRWVAVAIGAVAPFAAALAVLYALWRLVRGRLRRPAPATVPAQATARPAPAAQPAPVPPAARPAPTQEQEQAPASAPAPAPATDGQEGPRERE
>NZ_CP050177.1|WP_167025343.1|1624122_1625565_-|protoporphyrinogen-oxidase
MESNAQHVSTHTGRVVVIGGGIAGLAAAHRLLGAGVAVTLLEGSGRLGGKLLTGEIEGVAVDLGAESMLARRPEAVGLAEEVGLGGRLQPPTAGGASVWTRGALRPMPKGHVMGVPGDAAALAGLLSDEGLARIAREPDLAPTEVGDDVSVGEYVAERLGREVVDRLVEPLLGGVYAGDAYRISMKAAVPQLFAAVRTHDSLLAGVRDLQAKAARDPRSGAVFAGLAGGVGTLPGAVADAVRAGGGEILLDTPVLGLGRTPDGWRIRTGTGVLTADGVVLATPAWSAATLLAAESPAASAELAAVEYASMALVTLAFRRDELAGMPEGSGFLVPPVDGLTIKASTFSTRKWGWVADAAPDLFLLRTSIGRYGEEEHLHRDDADLVDVSLRDLGEATGLDAKPVASEVTRWIGGLPQYPVGHQARVERVRAAVAELPGLRVCGAAYDGVGIPACVASARRAADEIIATSTLARGTGRGAGE
>NZ_CP050177.1|WP_167025340.1|1623401_1624118_-|chlorite-dismutase-family-protein
MTAAPDKTPNAGKKAKDLNEVIRYTLWSVFKLREALPEDRGGYAEEVQELFDQLDAKDVTVRGTYDVSGLRADADVMIWWHAETADELQDAYNRFRRTRLGRALEPVWSNMALHRPAEFNKSHVPAFLADETPRDYVSVYPFVRSYDWYLLPDEERRQMLADHGKMARGFPDVRANTVASFSLGDYEWILAFEADELYRIVDLMRHLRASKARLYVREEVPFYTGRRRSVADLVAGLA
>NZ_CP050177.1|WP_167025337.1|1618789_1622149_+|AAA-family-ATPase
MSRQLLTVSPDEPDGVRPDSFRTIGEALAKARTGAVIRISPGRYPENLTVRNRVTLVAEGERGTVEICPRRGTALVLVADAVMLTDLTLRGGSEDFPVVDAPRGQVAMDGCTVVGSGWTAVLARESGALAMRNCRVSNPEGAGIVDTAPTGSVIADCVVENLGTSGVVLGEQARTTVRGCRVRDARGNGILANGEARGLIEDCDISGTEKPALALEGSSSTRVLRTAVHDTTVGVYVTSDSRPSLDQVTVTDTTGPGIALAAGSDPELIRCATARTKGNGLAVTERSRGSFQDCAFDTSVVPAIRVMGSGAPLLTGTTVRDCADKAASVLLEDESAAEFDRLEVTDAAGTGILVRTGAHPLLRHVRVLSARGHALEVVDDGRGRLEGGEIENAGATAVVVSGGGNLEMRDTVVRGAAETGIQVGPGGIGTVRDCEIHTVGGSGVAVENGGQLTALRAHITGSGAHGVLLANGARASLDACRASGSLGDGIRVDSAEQVTVTGCSVRENRGAGMRQTRAGDRLTVEDLVSTDNAVPDAWGATRDDTGVRPARNAGGGPDRVAPEGPLEELEALTGLAEVKHQVRTLVNLNQLAQRRARLGMPAPPMSRHLVFSGPPGTGKTTVARLYGGILKDLGVLRSGHLVEVSRADLVAQVIGGTAIKTTEAFNEALGGVLFVDEAYTLLSDSKGSGADFGKEAVDTLLKLMEDHRDDVVVIAAGYTDEMDSFLSSNPGLASRFTRTVEFANFSVDELVTITKSMCEAHRYELEPSTLGALALHYGQMTRGAGFGNGRAARRVFEEMVDRQAFRLSSMTDPAESDLSLLLPEDVAPAPDAGTDRADHSRDLLGRLDAMIGLGAVKREVTDLVSLLAATKQREAAGLPTPRISHHLIFSGPPGTGKTTVARLYADLLHSLGVLPQGQLVEVARADLVGRYVGHTAQLTKEVFERALGGVLFIDEAYTLTPEGSTSDFGREAVETLLKLMEDHRDEVVVIAAGYTEEMRRFLDSNPGLASRFSRSVEFENYSTEELVGIMSQQASVSGYDCPPGTLAALHAYVDTLPRDRSFGNARTSRQLLDAIMTRQARRLGTMAAPSLDDLRLLLPEDLPAASALVGGPDLLDRTP
>NZ_CP050177.1|WP_167025334.1|1617403_1618603_-|S8-family-serine-peptidase
MRHVPSPRAARRAAAGLLGLCAAVVPAGPAALADSVQLPVVRAVLAPGDPCAGASGETAREQPWTVRALGLSRAWSLSRGAGVTVAVVDTGVGTGVPALAGRVTAVDGAGDCVGHGSFAAGLVAGAPLDGVGPVGVAPGARILAVRGTDDRGVATPARVADGIRAAADGGARVIYVAAALPTGKSELTAAVAHAAGRDALVVAPAAPDALPVERVGGAPVVRPEPWYWPAAAPGVLSVSDYGPDGSRPEDAPVVGGVDLAAPGDAVVGVGPKGSGHYLGSGASLAAAHVAGAAALVRARRPELTAAQTSQQLTGTGYPADPVRVDVYAAMTMVLDAGRAAPAPPPARMPPPPSAAPLNRALVIGAVGGALVLLVAAAAVVIPRGRARGWRAADTPYPAP
>NZ_CP050177.1|WP_161312348.1|1632777_1633998_+|acetyl-CoA-C-acyltransferase
MPRTVRDVVFVDGVRTPFGKAGPKGIYHETRADDLVVKAIRELLRRNPDLDPAAIDEVAIAATTQIGDQGLTLGRTAGILAGLPQSVPGYSIDRMCAGALTAVTTTAGSIAFGAYDIVIAGGVEHMGRHPMGEGVDPNPRFVSERLVDDSALFMGMTAENLHDRFPHLTKRRADEYAVRSQEKAAKAYANGKIQQDLVPISVRRTDPAAGETGWGLATADEPMRPGTTLEMLAGLKTPFRPHGRVTAGNAAGLNDGATASLIAAEDFAREHGLPVRMRLVSYAFAGVEPEVMGYGPIPATEKALAKAGLSISDIGLFEVNEAFAVQVLALLDHYGIADDDERVNQYGGAIAYGHPLASSGVRLMTQLARQFEEQPHVRFGLTTMCVGFGMGATVIWENPHFDGGTK
>NZ_CP050177.1|WP_167025362.1|1633994_1636121_+|3-hydroxyacyl-CoA-dehydrogenase
MSIAELLKGAAELFPDEVVTQAHVRHLDLPGGVGRFALVTLDNGLDHTKPTTFGPRSLANIDAAIDQVEKEASEGTIIGAGVTGKPFIFAVGADLKGLVGVKTLEDGLASGRAGHDVFKRLSGLAVPTFAYYNGAAMGGGVEIGLHCTYRTVSAATPAFSLPEVFLGLVPGWGGCTLLPNLIGADRAVSVIIENSLNQNRQLKGGQVYDLGIADALFEGADFLEQSLLWTAAVLKGELAVARPDVDRGEAWDQAVARGRAAADAKVHGAAPAAYRALDIIAAVKDGDLQAGFDAEDRALAELILSSELRAGNYAFNLVQKRAKRPAGAPDKNLARPVTKVGVVGAGLMASQLALLFVRRLEVPVVLTDIDQERVDKGVAYVHAEIDKLLLKSRINPDKSNQLKALVTGVLDKAEAFSDADFVIEAVFEELGVKQKVFAELEAVAPAHAIFATNTSSLSVSEMASKLTHPERVVGFHFFNPVAVLPLLEIVRGERTDDASLATAFGVARKLKKSAVLVKDAPAFVVNRILTRFMGEIQNVIDEGTPVAVAERAVEPLGLPMSPLVLLELVGPAIGLHVSETLHRSFPDRFTVSRNLAAVVKAGKRGFYTYDSGKPELDPEVAALLTQGDTVLTEEQTRDRVLDAVAQEIGLMLAEGVVAEPEDIDLCLITGAGWPFHLGGITPYLDREGVSERVNGKRFLAPGVASVPV
>NZ_CP050177.1|WP_167025365.1|1636184_1637225_-|hypothetical-protein
MTTGWLLRGKDNRLTAYAPTADGVLRWTETLPGGPGWTGPELLPHPGLLPHLAFAQTAEGYVHLLGLRDRPRAGGPKNREVVHAVQFQTGRALRDWQPLGTPHTKDVNAASRTGRPSAVVDARGAVHLFVRNGNGHLSYRSQSPTGRWLGWGGVTPEGGKITGEMGAAVTDDGRIEILGPADGLMTHWARPKPDAQPERAEEGEEPAASAEETTGLCTGPGRVTHFWRDTGTRTLRAWRPGTAPTDLGGPGSGLPALLRTPVGGLDCTILAARGPDGRPQVAAYPTETEEAGLNWTPTGEPCTGVPALATDGRGRVVLAVVGEDGALRVTRQKDEPGLALEAWSRV
>NZ_CP050177.1|WP_167025368.1|1637385_1637781_+|NYN-domain-containing-protein
MRILLVVDAANVVGSVPDGWWRDRRGATERLRDSLVPYGEAGVAGHPGPVETVLVVEGAARGVEPVPGVRVEAASGSGDDRIVELAREAAAAGRGCVVATADRELRRRVEAYGASCVGPSAVRRRPGGGEG
>NZ_CP050177.1|WP_167025372.1|1637805_1639374_-|glycosyltransferase
MLAEPPPPAALPAPAGPEPGPPATPRVTTPVTDRPGPAAVPRPRARADRPANPAAAYWRRLLPALALLALVTRLPSFRHPLWSPDEGYLAVQARMLAAGGVLYDTVVDRKPPLLPWLYEATFALLGDSTLSGVRALAVLAHLVTAALLAATARHRWGDRAGRTAGVLYLLVSVGLNPEDTQAATFEVFILPFTAAAMWCAGKARWGAAGLAVAGALLTKQTGGAVLLPVLWLLGRTPRAPLSLARLAAGLALPLLATALLTTPSGLLFWTVTGSGSYATPTGSELHVLLRALANTALLGLGCAALLPPLLHLARRTAPRGDGDLWLWLASSAVAVLTGFHFFGHYFLQLLPPLVLLATEGLHLLPRDRLPPTLTAAACTCVVFLLWGVLAPRPELAHAQRLADAVRARTAPTDRVLVWGIHPETYWFADRAPASRYLTAGLLTNYSGGRDGPRVGEAYAVAGTWAVLGAELRDRPPALIVDDSRGKPFAPDRLPTLRRFLAHRYEPLPDTVDGAVIYVRTDP
>NZ_CP050177.1|WP_167036348.1|1639393_1640854_-|amino-acid-permease
MFRTKSVEQSLRDTEDPEFALKKSLSALDLTVFGVGVIIGTGIFVLTGKVARDTAGPATALAFVVAGVVCALAALCYAEFASTVPVAGSAYTFSYASLGELPAWIIGWDLVLELALGSAVVAVGWSGYLRSLLDTAGFHLPAALSGTHDGTFGFDLLACLLVLALTGILVAGMKLSSLITNVIVAIKVTVVLIVIVVGAFFIKGANYHPFVPPAKSTSGDSGLQAPLVQLIFGYTPTDFGVLGVFTAAAVVFFAFIGFDIVATAAEETRNPQRDVPRGILGSLIICTVLYVAVSLVVTGMQKYTALTVDAPLADAFKAVGHPFWAGLISFGAAVGLTSVCMILLLGQTRVFFAMSRDGLLPRTFSRVHPRFGTPYRSTLLLGSIVAAVAGFTSIDELASLVNIGTLFAFVVVAIGVVLLRRQRPDLPRSFRTPLVPFVPIASVLASLWLMLNLPAETWLRFGIWMLVGVAVYLLYGRGHSRLGRSR
>NZ_CP050177.1|WP_167025375.1|1641096_1643010_-|1-deoxy-D-xylulose-5-phosphate-synthase
MALLTHIRGPRDLDRLGPEQLEQLAGEIRSFLVDAVSKTGGHLGPNLGVVELTIALHRVFESPKDRVLFDTGHQSYVHKLLTGRQDFSRLKSKGGLSGYPSRAESDHDVIENSHASTVLGWADGLAKANEVLRKDDHVVAVIGDGALTGGMAWEALNNIAAAKDRPLVIVVNDNERSYAPTIGGLANHLATLRTTDGYERFLARGKDLLERTPVVGRPLYETLHGAKKGLKDFIAPQGMFEDLGLKYVGPIDGHDIEALESALLRAKRFGGPVIVHCLTEKGRGYKPAEQDEADRFHGIGPIHPDTGLPIAAAGMDWTSVFGEEMVKLGTERPDIVAITAAMLQPVGLAAFAKTFPDRVYDVGIAEQHGATSAAGLATGGLHPVFAVYATFLNRAFDQVLMDVALHRCGVTFVLDRAGVTGTDGASHNGMWDMSILQCVPGLRIAAPRDADQVRSQLREAVAVDDAPTVVRFSKGAVGPAVAAVARVGGIDVLRKTDEGTADVLLVSVGALAPMCLEIADLLDKQGITTTVVDPRWVKPVDEALVPLAEQHRVVVTVEDNSRVGGVGSAIAQALRDAGVDVPLRDFGIPPRFLDHASRKEVLAEIGLTAPDIARQVTGLVAKLDGRLVDSPTEAARD
>NZ_CP050177.1|WP_167025394.1|1643207_1644515_-|sugar-ABC-transporter-permease
MSIDKASTPAEPGTATAAPVDAPAPAAGASTVVDPRLLVREQGFSGYVAEFKRKIRAGDLGSMPVVVGLIIIWAIFTSLNSNFLTAGNLSDISVAMVGTGMIAVGIVFVLLLGEIDLSVGSVSGVAGAAFAVLSVTHGMNEWLALVLAILTGTVAGALHGFVFAKIGVPAFAVTLAGLLFWNGLMLQILGSDGTINLPNDGVLAKLTTYYFTDVAAAYGLAVVAVAVFFFTSFTENRRREAAGIPSRPVGEIVLRTALLAVLAFAVAIVYNQNKGLPLAVVIFLVVLVVTDFVLRRTTYGRKVFALGGSVEASRRAGINVATIRISVFAIAGTFAAVGGLFLASKIQAANQGAGAGDLLMNAIAASVIGGTSLFGGRGRTWNALLGVLVIVSIQYGLALQGIASPIQYMITGAVLLATVVIDAVTRKTQKSAGRA
>NZ_CP050177.1|WP_167025397.1|1644511_1645300_-|sugar-ABC-transporter-ATP-binding-protein
MVHVTATPVLALRGVSKRFGAVQALTDVELEVHSGEVLALVGDNGAGKSTLVKTIAGVHPIDDGVIEWQGDAVSIGRPHDAQNLGIATVYQDLSLADNIDVVGNLYLGRELRRWGILNEVEMERRSRELLNTLSIRIPSVRIPIASLSGGQRQTVAIARSMLGEPKLVILDEPTAALGVEQTAQVLDLVERLRERGLAVLLISHNMADVKAVADKVAVLRLGRNNGVFDVKTTSQEEIIAAITGATDNAVTRRASRNVEVQK
>NZ_CP050177.1|WP_167036351.1|1645513_1646614_-|sugar-ABC-transporter-substrate-binding-protein
MRRAAVAAAATAMAVSLAACGSAKESGDKADAPKTVKTDAIKVGLLLPENQTARYEKLDRPLIEKKIKELTNGKATIVYSNAKQDASVQNQQVDAMITNKVNVLIVDAVDSKAIAGSIQKAKDAGIPVVAYDRLAEGPIDAYTSFDNEEVGKVQGQALLDQLGANASKGDIVMMNGAITDPNAALFKKGAHSVLDGKVKIGKEYDTKEWSPANANANMEAAISALGKNKIVGVYSANDGMAGGIITALTGAGIKPLPPVTGQDAELAGVQRIVSGTQFMSVYKPYGQEADVAAQMAVALAKGEKLDSISKTTVDSPTTKGVPSVLVPVVSLTKANINDTVIKDGLYSVQEICTAQYKAACDAAGIK

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Crispr_ID: NZ_CP050177_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_5

2101573-2101731

Orphan

Consensus_repeat	Method
CGCGGGTCAAAGATGTCCTCAAGCGCCGGACGGGCT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP050177_5

>merge|NZ_CP050177|5|2101573-2101731|PILER-CR
AGCCCGTCCGGCGCTTGAGGACATCTTTGACCGCAACGGTCACGATCGGACCGCAACCCCTCTCAAGCCCGTCCGGCGATTGAGGACATCTTTGACCCGCACGGGCAGGCCCGAGCCACACCCAGCCCGTCCGGCGCTTGAGGACATCCGTGAGCCGCG

>NZ_CP050177|5|2|2101573-2101731|PILER-CR
AGCCCGTCCGGCGCTTGAGGACATCTTTGACCGCAACGGTCAC	GATCGGACCGCAACCCCTCTCAAGCCCGTCCG
GCGATTGAGGACATCTTTGACCCGCACGGGCAGGCCCGAGCCA	CACCCAGCCCGTCCG
GCGCTTGAGGACATCCGTGAGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167026307.1\|2088563_2089130_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223532
NZ_CP050177.1\|WP_167026334.1\|2099773_2101222_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143465
NZ_CP050177.1\|WP_167026349.1\|2108346_2110218_-\|chitinase	unknown	unknown	gnl\|CDD\|119350
NZ_CP050177.1\|WP_167026322.1\|2094216_2094909_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026352.1\|2110266_2110734_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026361.1\|2113134_2114088_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP050177.1\|WP_167026358.1\|2112328_2113135_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP050177.1\|WP_167026340.1\|2103418_2105632_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|237871
NZ_CP050177.1\|WP_167026337.1\|2101753_2103295_-\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377939
NZ_CP050177.1\|WP_167026346.1\|2107433_2108393_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP050177.1\|WP_167026316.1\|2091524_2092826_-\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100084
NZ_CP050177.1\|WP_167026343.1\|2105949_2107296_+\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|235685
NZ_CP050177.1\|WP_167026328.1\|2096371_2097565_+\|sugar-hydrolase	unknown	unknown	gnl\|CDD\|185755
NZ_CP050177.1\|WP_167026310.1\|2089160_2090006_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379120
NZ_CP050177.1\|WP_167026364.1\|2114084_2115269_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP050177.1\|WP_167026355.1\|2110873_2112289_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274522
NZ_CP050177.1\|WP_167026331.1\|2097656_2099630_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173850
NZ_CP050177.1\|WP_167026319.1\|2092822_2094076_-\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|235472
NZ_CP050177.1\|WP_167026325.1\|2095101_2096097_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP050177.1\|WP_167026313.1\|2090186_2091344_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|234737

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167026307.1\|2088563_2089130_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	9.44605e-08
NZ_CP050177.1\|WP_167026334.1\|2099773_2101222_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143465	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.	0
NZ_CP050177.1\|WP_167026349.1\|2108346_2110218_-\|chitinase	gnl\|CDD\|119350	cd02871, GH18_chitinase_D-like, GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.	3.43412e-147
NZ_CP050177.1\|WP_167026355.1\|2110873_2112289_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|274522	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.	2.22699e-66
NZ_CP050177.1\|WP_167026361.1\|2113134_2114088_-\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	1.16817e-77
NZ_CP050177.1\|WP_167026358.1\|2112328_2113135_-\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.05583e-66
NZ_CP050177.1\|WP_167026340.1\|2103418_2105632_-\|ATP-binding-protein	gnl\|CDD\|237871	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional.	0.00348916
NZ_CP050177.1\|WP_167026337.1\|2101753_2103295_-\|PucR-family-transcriptional-regulator	gnl\|CDD\|377939	pfam07905, PucR, Purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.	1.05679e-29
NZ_CP050177.1\|WP_167026346.1\|2107433_2108393_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	6.72872e-28
NZ_CP050177.1\|WP_167026316.1\|2091524_2092826_-\|site-2-protease-family-protein	gnl\|CDD\|100084	cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. In Escherichia coli, the S2P homolog RseP is involved in the sigmaE pathway of extracytoplasmic stress responses. Also included in this group are such homologs as Bacillus subtilis YluC, Mycobacterium tuberculosis Rv2869c S2P, and Bordetella bronchiseptica HurP. Rv2869c S2P appears to have a role in the regulation of prokaryotic lipid biosynthesis and membrane composition and YluC of Bacillus has a role in transducing membrane stress. This group includes bacterial and eukaryotic S2P/M50s homologs with either one or two PDZ domains present. PDZ domains are believed to have a regulatory role. The RseP PDZ domain is required for the inhibitory reaction that prevents cleavage of its substrate, RseA.	2.88043e-45
NZ_CP050177.1\|WP_167026343.1\|2105949_2107296_+\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|235685	PRK06058, PRK06058, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP050177.1\|WP_167026328.1\|2096371_2097565_+\|sugar-hydrolase	gnl\|CDD\|185755	cd09216, GH64-LPHase-like, glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like. This subfamily is represented by the laminaripentaose-producing, beta-1,3-glucanase (LPHase) of Streptomyces matensis and related bacterial and ascomycete proteins. LPHase is a member of glycoside hydrolase family 64 (GH64), it is an inverting enzyme involved in the cleavage of long-chain polysaccharide beta-1,3-glucans, into specific pentasaccharide oligomers. LPHase is a two-domain crescent fold structure: one domain is composed of 10 beta-strands, eight coming from the N-terminus of the protein and two from the C-terminal region, and the protein has a second inserted domain; this cd includes both domains. This protein has an electronegative, substrate-binding cleft, and conserved Glu and Asp residues involved in the cleavage of the beta-1,3-glucan, laminarin, a plant and fungal cell wall component. Among bacteria, many beta-1,3-glucanases are implicated in fungal cell wall degradation. Also included in this family is GluB , the beta-1,3-glucanase B from Lysobacter enzymogenes Strain N4-7. Recombinant GluB demonstrated higher relative activity toward the branched-chain beta-1,3 glucan substrate zymosan A than toward linear beta-1,3 glucan substrates. Sometimes these two domains are found associated with other domains such as in the Catenulispora acidiphila DSM 44928 carbohydrate binding family 6 protein in which they are positioned N-terminal of a carbohydrate binding module, family 6 (CBM_6) domain. In the Cellulosimicrobium cellulans, glucan endo-1,3-beta-glucosidase, they are positioned N-terminal of a RICIN, carbohydrate-binding domain.	4.61998e-173
NZ_CP050177.1\|WP_167026310.1\|2089160_2090006_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379120	pfam13312, DUF4081, Domain of unknown function (DUF4081). This domain is often found N-terminal to the GNAT acetyltransferase domain, pfam00583 and FR47, pfam08445.	7.35854e-52
NZ_CP050177.1\|WP_167026364.1\|2114084_2115269_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	5.93931e-156
NZ_CP050177.1\|WP_167026331.1\|2097656_2099630_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173850	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase. VLCAD is an acyl-CoA dehydrogenase (ACAD), which is found in the mitochondria of eukaryotes and in some bacteria. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. VLCAD acts as a homodimer.	6.91077e-90
NZ_CP050177.1\|WP_167026319.1\|2092822_2094076_-\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NZ_CP050177.1\|WP_167026325.1\|2095101_2096097_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.7605e-06
NZ_CP050177.1\|WP_167026313.1\|2090186_2091344_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|234737	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.	0

>NZ_CP050177.1|WP_167026334.1|2099773_2101222_-|aldehyde-dehydrogenase-family-protein
MTSTTPFWLAGRQATSGEDTLDVTSPWDGRHVGTVAVPTEAQVEEAVAAAYAVRAEFAATPAHQRATALDHVSRRLAERAEEIARLISAENGKPLKWARGEAGRAVSVFRFAAEEARRFNGGEAQRLDTDAGGAGRLALTRRFPKGVVLGIAPFNFPLNLCAHKVAPALAVGTPIILKPAPATPLSALLLGELLAETDLPAGAWSVLPVPNDRMPALVQDDRLPVISFTGSDKVGYAIMDSVPRKHCTLELGGNGAAVVLADFASDADLDHAATRIATFSNYQGGQSCISVQRVIADAAVYERLVPRVVAAVEAQVTGDPADDSTDVGPLVSEEAARRVESWVDEAVQAGARLLTGGKRDGSSYAPTVLADVPEDVTLAREEVFGPVLTVRSVTGESAAFEAVNESAYGLQAGVFTHDLQAAFRAHRALEVGGVIIGDVPSYRADQMPYGGVKQSGVGREGVRFAMEDYTYERVMVLTGLAL
>NZ_CP050177.1|WP_167026331.1|2097656_2099630_-|acyl-CoA-dehydrogenase
MSAPSVPSEASASKDPQGRPTVSEREARQVAEDAREQGWRKPSFAKEMFLGRFRLDLIHPHPVPAPDDVRRGEAFLAKVRAFCDEKLDGALIEREARIPDEVIAGLKELGVLGMKIDVKYGGLGLTQVYYNKALSLIGSANPAVGALLSAHQSIGVPQPLKMFGTQEQKDTFLPRLARTDISAFLLTEPDVGSDPARLATSAVPDGDEYVLDGVKLWTTNGVVADLLVVMARVPKADGRKGGITAFVVEADSPGITVEHRNAFMGLRGLENGVTRFHQVRVPAANRIGEEGAGLRIALTTLNTGRLSLPAMCVGAGKWCLKIAREWSGAREQWGRPVARHEAVGEKISFIAATTFALEAVVDLSSQMADEDRNDIRIEAALAKLYGSEMGWRMADELVQIRGGRGFETAESLAARGERAVPAEQMLRDMRINRIFEGSTEIMHLLIAREAVDAHLAVAGDIIDPDKSLADKARAGAQAGRFYARWLPKLVAGTGQLPGSYAEFHPSGHADLSVHLRYVERTSRKLARSTFYAMSRWQGRMETKQGFLGRIVDIGAEIFAMSAACVRAEMLRAGGDHGREAYQLADVFCRQARIRVEELFTRLWSNTDEIDRKVVDGVMSGTYTWLEEGIVDPSGDGPWIADATPGPSGRENVHRRIG
>NZ_CP050177.1|WP_167026328.1|2096371_2097565_+|sugar-hydrolase
MLSLKKVLAPFAAAVILAAGFTAAGPAEPAEAAVPTTIPLTLTNNSGRTDPVYVYNLGTLLTTGQQGWADANGTFHAWPAGGNPPTPAPDASIAGPANGQSKTIRMPKFSGRVYFSYGQKLDFRLTTGGLVQPAVQNPADPNRNILFNWTEYTLNDAGIWINSTQVDMFSAPYAVGVRIPNGTTRTTGHLKPGGYNGFYSALRGQSGWGGLIQTRSDGTVLRALSPGHGVGSGALSGAVLNDYINRVWTKYASSTLTVTPFTDQPSIKYFGRVSGNVMNFTNSAGAVVTSFQKPDSDSVFGCYKLLDAPNDLVRGPISRTLCAGFNRSTLLTNPNQPDASAANFYQDGVTNHYARLLHDRMADGKAYAFAFDDVGAHESLVNDGNPQQAYITLDPFN
>NZ_CP050177.1|WP_167026325.1|2095101_2096097_-|GNAT-family-N-acetyltransferase
MTDFGLLDDLSRWQAGFERRLRAAYDSAGHPPAAVERRVEEVRAAVPRLTVAELTGEAGEVVGCVAVSLDEDEPGGSLTGRIVDLWIDPEHAGQGYGEAARTWAEDRCAAAGATRLTVQLTETEPLFAHYAVRGQTRLRHLAAPAAPAADSAPPRDSAPAAGTGPAPRTRPALTARPMTDDEYGPWLVAGKDEYVADIVRSGSLTPEEARIKSDRDFADLLPAGLATPDHAVVVLEAAGAPIGTLWLKHHHLPGVTFGFSLEIDERFRGQGYGHASMAVAESGTLAAGDSVLMFNVFGGNTVAMGLYDVSGYRAVLEHRYTPLPRETPGAA
>NZ_CP050177.1|WP_167026322.1|2094216_2094909_-|hypothetical-protein
MAVLLTGSLLATLAGCDGGGTGDNKPSAAPSPAGPPPRTERQLTAAALSDGERAGAYTVSTYPLGGPLDTDYTAEPAACQPLVSLAPAVSGFRPAAEVGRQAENPAETLGVTVDIQLRSYAGQGAARVMKALTTAGRTCAGGFTEDRLSLVRAKYLAVEAVAAPRLGDSSAAYRFTILDVRGKKKLYEYLTVVRSGSTTLSFRAEVTGTQDVGAVPADVIRAQWAKFDAS
>NZ_CP050177.1|WP_167026319.1|2092822_2094076_-|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MSDSPAPLADPHIAFDPTEGRRDIVVLGSTGSIGTQAIDLVLRNPDRFRVTALSAAGGRVALLAEQARRLRVRTVAVAREDAVPALKEALRLEYGPGEPLPEILAGPGAATDLAASDCHTVLNGITGSIGLAPTLAALEAGRTLALANKESLIVGGPLVKAVARPGQIIPVDSEHAALFQALAAGTRADVRKLVVTASGGPFRGRTRAELADVTPEDALAHPTWAMGPVITINSATLVNKGLEVIEAHLLYDIPFERIEVVVHPQSYVHSMVEFTDGSTLAQATPPDMGGPIAVGLGWPRRVPDAAPAFDWTKASAWEFFPLDTEAFPSVGLARHVGTLGGTAPAVFNAANEECVDAFLGGRLPFNGIMDTVTEVVAEHGNPLTGTSLTVPDVLEAETWARARARELAVKATAEARA
>NZ_CP050177.1|WP_167026316.1|2091524_2092826_-|site-2-protease-family-protein
MTILLTVLGIAVFAVGLLISIAWHELGHLSTAKLFGIRVPQYMVGFGPTVWSRKKGDTEYGLKAIPLGGYIRMIGMFPPDAQGRIEARSTSPWRGMIEDARSAAFEELEPGDETRLFYTRKPWKRVIVMFAGPFMNLILAVAIFLGVSMSFGFATQTTKVAGVPKCVIEQSQNRETCAKGDPVSPGYAAGLRTNDRIVAFNGKPVKDWSALSDLIRKTTGPATITVDRAGTDTVLHATLVSNQVLAKDSDGQAIEGKYVTAGYLGFISASEIVPLSFTDSVGRMGTMLEDGVDSIVALPSKIPDLWNAAFDGGERKADSPVGVVGAARISGEVMNLDQPTQNLIATLLFVVASFNLSLFLFNMLPLLPLDGGHIAGALWEAARRNLARLFKRPDPGPFDVAKLMPVAYVVAGIFICFTVLVLIADVVNPVKIS
>NZ_CP050177.1|WP_167026313.1|2090186_2091344_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MTAISLGMPSVPTKLAERRVSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDDADALATIARKSQIPVIADIHFQPKYVFAAIDAGCAAVRVNPGNIKQFDDKVKEIAKAARETRTPIRIGVNAGSLDARLLKKYGKATPEALVESALWEASLFEEHGFQDIKISVKHNDPVVMVNAYRQLAAQCDYPLHLGVTEAGPAFQGTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEVKVGIQILESLNLKQRRLEIVSCPSCGRAQVDVYKLADEVTAGLDGMEVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEIIKTVPESKIVETLIEEAMKIAEQMERDGIPSGEPEVSVSG
>NZ_CP050177.1|WP_167026310.1|2089160_2090006_-|GNAT-family-N-acetyltransferase
MLTHTTTRVLEPSELGAALAILESDPVTNAFVTSRVRVAGLDPWRLGGEMWGWYADGRLRSLCYSGANLVPICATPEAVRGFADRARRTGRRCSSIVGPAEATTQLWRLLEPNWGPAREVRANQPLMVTDHLPADVPPDPLVRRIRKDELDVIMPACVAMFTEEVGVSPLAGDGGLLYQARVAELVGAGRSFARVEDGKVVFKAEIGAATPRACQIQGVWVDPAHRGRGLSETGMAAVVRYALTDVAPVVSLYVNDYNTPARAAYRRVGFHEVGAFMSVLF
>NZ_CP050177.1|WP_167026307.1|2088563_2089130_-|GNAT-family-N-acetyltransferase
MPSIPGNAPRTPDVQVGPVDLAARVDEALAVQALAFGLSDDEIEVRRHIVLRHLMYPGCRALGATTDEGRLVGFVYGLPNDRAHWWSSVVEPYLRSTGTDSWLDDTFVITELHVHPGFQARGIGRSLITTLTDGAAQPRSILSAIDIESPARRLYRSLGYEDLARRVLFPSAPKPYAVMGAPLPLRRP
>NZ_CP050177.1|WP_167026337.1|2101753_2103295_-|PucR-family-transcriptional-regulator
MPPTLASLVQHSALHLTVRAGEDRLRTPVRWAHASELADPVPYMEGGELLLVTATTLDAEDPQAMTTYVRRLVGAGVAGLGFAVGVNYDDVPEALLTAARVEGLPLLEVPRRTPFLAISKAVSAAISADQYRAVTAGFEAQRELTRAALADGPAVLLTRLAAYVDGWAALYDATGAVVAAAPEWAARRAARLTADVDRLRERPAPASVVVGHTGHGEGAEDRVELQSLGTGRRVGGALAVGTGAALGTAERYAVHSAVALLTLTTARSRALQEAEQRLGAAVLTMLLSGQPDHARSVAGELYGGLLDAPFRLLIAEPESDSTEPGTLEALSDALEAAGARAGEAVLAVPDGERLAVLAVDGGAVVASLSAAAPDDVVIGLSAPTGPIAVGGAYKQAEAALSVARRRGRVLVEHEELAAGSILPLLADDAVRAFADGLLRALYEHDAKGRGDLVASLRAWLSRHGQWDAAAADLGVHRHTLRYRMRRVEEILGRSLDDPDVRMELWLSLKTSDR
>NZ_CP050177.1|WP_167026340.1|2103418_2105632_-|ATP-binding-protein
MDTDGTYDARDARAGSTGRAGSPGDGWDNSDGPRAHSVPRPAGPPPPLPPSAPPPVAPSAAAGPRPGPVEPPPAPEHRPVIGPTLRDWLHVPRVDAGPGTWAYGHVVRAEREPEKAPLRQLVSGALISLLAGVLLWSLIYNGYLGSIWVWPLLAFTPDSWPGTTTGETSLKVYYALMIIVMAVVFGRLGRWAELARRAFGPRPGAGVPVPVPPGPEDDLAEWPELRAAGQGETAARLAAEVRDGRMNDVDYTRIRRAWQSVRADPSRLTAFTDEVRAHGAAACVHPSHARDLPVRAARHDLLGRQVLLGTVQDGQRNPYARRGTGLALDPDLLGTSLLAVGPPGAGKTRAVVRPVVESLALQALAGRAAVIAVCATGTRLGPDEAYDVVVGLGDPASVYDLDLYGGTNDPDEAATLLAEGLVGDLADTDGRRATTALAQLLGPFRAAHDRLPSVPELRELLDGEPTALAALREALDTKGQYGMRRELDTRERQSGTPGDPGPALADRIALLDRPAFAGFFDTSGRTRPFSLRTLEHPLRVRIDLPERGHAEASRMLARLILAQFTANAAVRADRSLFACLVLDDATRTLTAETLRGVQRLRSANAGAVLTLRTLDDVPEALHTSLLGAVGCRMAFSGITTWDGKRFAEAWGTEWVETRDVTQRTVFADQPLTRAIHAFRKLVTGKAVTTDAVTVRQVERERWSASDLAHAVPAGHAVLSLRTVGGEHAPPLLVDLGG
>NZ_CP050177.1|WP_167026343.1|2105949_2107296_+|4-aminobutyrate--2-oxoglutarate-transaminase
MTAIPQERRLVTAVPGPRSLELQARREAVVAAGVASTLPVFAARAGGGILEDVDGNRLIDFGSGIAVTTVGASAEAVVRRATAQLADFTHTCFMVTPYEGYVEVCEKLAELTPGDHAKKSALFNSGAEAVENAVKIARSWTKRQAVVVFDHAYHGRTNLTMALTAKNMPYKNGFGPFAPEIYRVPVAYGYRWPTGPENCGAEASAQAIDQITKQIGAENVAAIIIEPVLGEGGFIEPAKGFLPALARFAKDHGIVFVADEIQSGFCRTGQWFASEDEGLVPDLVTTAKGIAGGLPLAAVTGRAEIMDAAHASGLGGTYGGNPVACAAALGAIETMRELDLVARARRIEEIMKGRLSAMSEKYDVIGDVRGRGAMIAIELVKDRGTKEPDPATTGALAKACHAEGLLVLTCGTYGNVLRFLPPLVIGEDLLNEGLDVLESALAALPGAS
>NZ_CP050177.1|WP_167026346.1|2107433_2108393_+|phosphatase-PAP2-family-protein
MRETPRSQGTAGDTGSGRPQHRSGRAFAHTTGASGSGSPHGSDGRTAQTPRGVRHTGPVGRPGTTPPVPGRPLSLLFSAVRSGFRSGLSAFVSVFSVPRRPWRSRRTWGFALCAVLFALVTWRAATDGPVRRADERLELSLAGHGPRPLTEFFADLGSVVVAVPVLALALGYVVWRGRRDRALAAALTMVAVPLLVVPLKFGIDRRGPLTDATGYYPSGHTATAMVAYGAAALLLAPYAGRRRTVPVAVLLTLATGTGLLLRGYHWPLDVLGSLALGGILLLLLDRALRGADSRRARRSAGVGPVRGSTRRSSARTPGR
>NZ_CP050177.1|WP_167026349.1|2108346_2110218_-|chitinase
MLSPPAPSFPPCPEAVVERTRRRGRYPRLVAAFAAALLTAGGLVATAQTAQAADVDVAANGGFESGLSGWSCTAGSGAAVTTPVHAGSGALRGTPAGNDNAKCSQTVTVQPDSTYTLSSWVRGSYVYLGASGTGTTDVSTWTQSAPDWQKLTTTFRSGPSTRSVTIYLNGWYGTPAYYADDLTLVGPGGTPVQPPAVPTGLRSTGVTSSSVSLSWTAVTGATGYSVYRGGTKALDVTGTSATVSGLNASTAYSFQVAATNSGGASALSSAVSATTSASGGGGGGTTLPAHALVGYLHSSFANGSGYTRMADVPASWDVINLSFGEPTSVTSGDIRFNLCPVTECPNVESAADFKAAIKAKQAAGKKVLISIGGANGQVQLATTAARDTFVSSVSKIIDEYGLNGLDIDFEGHSLSLNTGDNDFRNPTTPVVVNLISALKTLKAKYGAGFVLTMAPETFFVQLGYQFYGSGPWGGQDPRAGAYLPVIHALRDDLTLLHVQDYNSGPIMGLDNQYHSMGGADFHIAMTDMLLTGFPVAGDTSRVFPALRPDQVAIGLPASTQAGNGYTTPAEVNKALNCLTKKTDCGSYQTHGTWPALRGLMTWSINWDRFNGQEFSRNFDAYFP
>NZ_CP050177.1|WP_167026352.1|2110266_2110734_-|hypothetical-protein
MTGSAAKSAVEWLVSVAPDPDACRWEWERNPLGVALLPAGRRWDVLILPGELGYPTLDVLTRLVDRPGPVLADFGDARMGFFVPPGTATRWLGTGVRGAGDGTWIVVPYPGRARGGVRWLIPPDGSGTLTDPALLELAMHEAAAGQGGGVRENGA
>NZ_CP050177.1|WP_167026355.1|2110873_2112289_-|FAD-dependent-oxidoreductase
MAPRAMRTAAASLSDARPLSYWLDDPGRPGALPALTGDERCDLLVVGGGYSGLWTALLAKERDPDRDVVLIEGHEAGWAASGRNGGFCAASLTHGFSNGLARWPGELDVLEELGARNLDAIEAAVARYSLDCDFERSGEIDVATEPYQLADLRETYEAAVKAGVTGLELLDRDAVRAEVDSPTFLGGLHDPRGVAMLHPAKLVWGLKRAVTALGVRIYENTRGLELARTATGMAVRTPYGRVFARRVALGTNVFPSLVKRVRPYTVPVYDYALTTEPLTEAQLASVGWRNRQGLGDSANRFHYFRLTADHRILWGGYDAVYPYGGRLDADLDQRPETYLTLASHFFRCFPQLEGIRFSHAWGGAIDTCSRFSAFFGTAYDGRVAYAAGYTGLGVGATRFGGEVMLDLLAGERTVRTELEMVRTKPLPFPPEPAAWAGIGLTKWSLARADAHGGRRNLWLRTMDRLGLGFDS
>NZ_CP050177.1|WP_167026358.1|2112328_2113135_-|ABC-transporter-permease
MGAVRWIRRNLVVLAGLLTLAYMIVPNVVVMVFSFNKPQGRFNYSWQTFSLDAWKDPCGVADLCGSLSLSLRLATFATIGATVLGTMIAFALVRYRFRARGAINSLIFLPMAMPEVVMAASLLTLFLNLGAQLGFTTILIAHVMFCLSFVVTAVKARVLSMDPRLEEAARDLYAGPVQTFVRVTLPIAAPGIAAGALLAFALSFDDFIITNFNAGQTVTFPMFVWGSAQRGTPVQINVIGTAMFVIAVALVGAGQLIGNRRRKSAATT
>NZ_CP050177.1|WP_167026361.1|2113134_2114088_-|ABC-transporter-permease
MTATEAPPAPPGPPTPPAAGPAEIPLHKVSRRKRLVPYWLLLPGILWLLVFFALPLVYQASTSVQTGSLEAGFEVTWHFQTYWDALQEYYPQFVRSLLYAGTATILCLLLGYPLAYLIAFKAGRWRNLVLVLVIAPFFTSFLIRTLAWKTILSDGGPVVGVLNSLHVLDVTGWLGWTEGDRVLATPMAVVCGLTYNFLPFMILPLYTSLERIDGRLHEAAGDLYARPLTTFRKVTFPLSLPGVVSGTLLTFIPASGDYVNAELLGSTDTKMIGSVIQTQFLRVLDYPTAAALSFILMAVVLLMVTFYIRRAGTEELL
>NZ_CP050177.1|WP_167026364.1|2114084_2115269_-|ABC-transporter-ATP-binding-protein
MTETAPTGHGGDDVRLTGISKTYGSFHAVKPLDLTVPQGSFFALLGASGCGKTTTLRMIAGLEEPTTGSVFLGDKDVTDLPPYKRPVNTVFQSYALFPHLDIYENVAFGLRRRGVKSVRKQVGDMLDLVQLGDFARRKPHQLSGGQQQRVAVARALINHPQVLLLDEPLGALDLKLRRTMQLELKRIQTEVGITFIHVTHDQEEAMTMADTVAVMNGGVVEQLGSPADLYENPNTTFVANFLGTSNLIEAEVAGKNGGDVVVTVGGAKLVLPAARCSAPTTSGGTLLVGIRPEKISLAHADDAGSVPDGRNRVPGRIVDSSFIGVSTQYVVDSPAGTALEVYAQNIERDTRLVPGAEVVLHWNPAHTFGLDAAQSLRAGTTGAGGTETADGDAS

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Crispr_ID: NZ_CP050177_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_6

2133037-2133123

Orphan

Consensus_repeat	Method
TCAAGCCCGTCCGGCGTTTGAGGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_6

>merge|NZ_CP050177|6|2133037-2133123|CRISPRCasFinder
TCAAGCCCGTCCGGCGTTTGAGGACGTCTTTGACCCGCAGGGGCAACGGGCCCGAGCCCCCTCAAGCCCGTCCGGCGTTTGAGGACG

>NZ_CP050177|6|4|2133037-2133123|CRISPRCasFinder
TCAAGCCCGTCCGGCGTTTGAGGACG	TCTTTGACCCGCAGGGGCAACGGGCCCGAGCCCCC
TCAAGCCCGTCCGGCGTTTGAGGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167026394.1\|2127606_2128110_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|214628
NZ_CP050177.1\|WP_167026397.1\|2128094_2129474_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235823
NZ_CP050177.1\|WP_167026418.1\|2139590_2140148_-\|ribosome-recycling-factor	unknown	unknown	gnl\|CDD\|178850
NZ_CP050177.1\|WP_167026421.1\|2140305_2141103_-\|UMP-kinase	unknown	unknown	gnl\|CDD\|239787
NZ_CP050177.1\|WP_167036451.1\|2134191_2135802_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_CP050177.1\|WP_167026385.1\|2123848_2124565_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP050177.1\|WP_167036448.1\|2122697_2123852_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP050177.1\|WP_167026415.1\|2138520_2139591_-\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|366491
NZ_CP050177.1\|WP_167026400.1\|2129627_2130356_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP050177.1\|WP_167026405.1\|2131729_2132851_+\|Rossmann-fold-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|224527
NZ_CP050177.1\|WP_167026403.1\|2130337_2131558_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026382.1\|2121804_2122608_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|252734
NZ_CP050177.1\|WP_167026430.1\|2143445_2143991_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP050177.1\|WP_167026408.1\|2135855_2136965_-\|thiamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270263
NZ_CP050177.1\|WP_167026424.1\|2141260_2142115_-\|elongation-factor-Ts	unknown	unknown	gnl\|CDD\|236491
NZ_CP050177.1\|WP_167026388.1\|2124662_2125910_+\|beta-lactamase-family-protein	unknown	unknown	gnl\|CDD\|365903
NZ_CP050177.1\|WP_167026411.1\|2137238_2138351_-\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|184689
NZ_CP050177.1\|WP_167036454.1\|2133142_2134186_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP050177.1\|WP_167026391.1\|2125982_2127422_-\|gamma-aminobutyraldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143411
NZ_CP050177.1\|WP_167026427.1\|2142220_2143168_-\|30S-ribosomal-protein-S2	unknown	unknown	gnl\|CDD\|235396

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167026394.1\|2127606_2128110_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|214628	smart00344, HTH_ASNC, helix_turn_helix ASNC type. AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli).	4.46538e-32
NZ_CP050177.1\|WP_167026397.1\|2128094_2129474_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235823	PRK06541, PRK06541, aspartate aminotransferase family protein.	0
NZ_CP050177.1\|WP_167026418.1\|2139590_2140148_-\|ribosome-recycling-factor	gnl\|CDD\|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	6.92626e-100
NZ_CP050177.1\|WP_167026421.1\|2140305_2141103_-\|UMP-kinase	gnl\|CDD\|239787	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).	2.21923e-134
NZ_CP050177.1\|WP_167036451.1\|2134191_2135802_-\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	1.51403e-90
NZ_CP050177.1\|WP_167026385.1\|2123848_2124565_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.9438e-65
NZ_CP050177.1\|WP_167036448.1\|2122697_2123852_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.07644e-40
NZ_CP050177.1\|WP_167026415.1\|2138520_2139591_-\|phosphatidate-cytidylyltransferase	gnl\|CDD\|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	4.67207e-74
NZ_CP050177.1\|WP_167026400.1\|2129627_2130356_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	4.97498e-63
NZ_CP050177.1\|WP_167026405.1\|2131729_2132851_+\|Rossmann-fold-nucleotide-binding-protein	gnl\|CDD\|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	1.43857e-08
NZ_CP050177.1\|WP_167026424.1\|2141260_2142115_-\|elongation-factor-Ts	gnl\|CDD\|236491	PRK09377, tsf, elongation factor Ts; Provisional.	2.22401e-119
NZ_CP050177.1\|WP_167026382.1\|2121804_2122608_+\|SAM-dependent-methyltransferase	gnl\|CDD\|252734	pfam04672, Methyltransf_19, S-adenosyl methyltransferase. This family contains a SAM (S-adenosyl methyltransferase) domain, with a central beta sheet with 3 alpha-helices on both sides. Crystal packing analysis of the structure Structure 3giw suggests that a monomer is the solution state oligomeric form. An unidentified ligand (UNL, cyan) was found at the putative active site surrounded by the residues His57, His170, Phe171, Tyr216 and Met22. The UNL is likely to be a phenylalanine or phenylalanine-like molecule. (details derived from TOPSAN).	3.362e-102
NZ_CP050177.1\|WP_167026430.1\|2143445_2143991_+\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	7.42622e-17
NZ_CP050177.1\|WP_167026408.1\|2135855_2136965_-\|thiamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270263	cd13545, PBP2_TbpA, Substrate binding domain of thiamin transporter, a member of the type 2 periplasmic binding fold superfamily. Thiamin-binding protein TbpA is the periplasmic component of ABC-type transporter in E. coli, while the transmembrane permease and ATPase are ThiP and ThiQ, respectively. Thiamin (vitamin B1) is an essential confactor in all living systems that most prokaryotes, plants, and fungi can synthesized thiamin. However, in vertebrates, thiamine cannot be synthesized and must therefore be obtained through dietary absorption. In addition to thiamin biosynthesis, most organisms can import thiamin using specific transporters. After binding thiamine with high affinity, TbpA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The thiamine-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.67213e-107
NZ_CP050177.1\|WP_167026388.1\|2124662_2125910_+\|beta-lactamase-family-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.94728e-53
NZ_CP050177.1\|WP_167026411.1\|2137238_2138351_-\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|184689	PRK14459, PRK14459, ribosomal RNA large subunit methyltransferase N; Provisional.	0
NZ_CP050177.1\|WP_167036454.1\|2133142_2134186_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.66684e-119
NZ_CP050177.1\|WP_167026391.1\|2125982_2127422_-\|gamma-aminobutyraldehyde-dehydrogenase	gnl\|CDD\|143411	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.	0
NZ_CP050177.1\|WP_167026427.1\|2142220_2143168_-\|30S-ribosomal-protein-S2	gnl\|CDD\|235396	PRK05299, rpsB, 30S ribosomal protein S2; Provisional.	4.59169e-163

>NZ_CP050177.1|WP_167026405.1|2131729_2132851_+|Rossmann-fold-nucleotide-binding-protein
MVNGDDLQPQPTDREIETLDEFDLRIVETGGKLDGFRLQSVDLTSRTDTLIATDTSGAVFLGCPMETDALAKVRADGALVFPPVPNLPFDPYRGLLYSPDQLFDGLADHGYDATPDARAYAWFQRTRSDGDVFASMLRSVHDDAISDALDELLVGARVVGVMGGHAMARGTDAYAGAARLGRALTRTGLTVATGGGPGAMEAANLGAYAAPHPDDMLDEALELLAETPSFVPSVSDWAQAAFDVRARWPKGDESVGVPTWFYGHEPPNAFAAHIAKYFANATREDGLLARCNAGVIFLPGAAGTVQEIFDNATPNYYESRGEPTPMVLVDREHWTETLPTWPLLSSLARRRPMEARIALVDSVDDAPAALAAL
>NZ_CP050177.1|WP_167026403.1|2130337_2131558_+|hypothetical-protein
MLSLRLTRGTHPLVLLRRLLVAAASAGVGFLLLCTLGWALGHPAGSYLRLLWCLVPLAATVQFAVAVARTDPSTRPRRGLSAVGLGPARLTMLAVVSTAVATTLGSAVALLVFLHLRGDLTGMPFDGDAADLLSADRPLPMGAALTLLAAAPVLATLAAGFALRPRPTAPVAERSEAGTGAGAGTGTAEAGEAKPRRPDAFAPSSAPSGLPWGVALTAAGLAVETYASRNGNAGALPLPGRFDSGSAGVLAGWALTAVGLALAGPGITHLCGWLLQTLRPGAVRLLAGRTLMSEARRIGRPLGVLCAVISGAFAAASLYGPGDERPFGPLTGLGAGLVIGCTAASLLTAALESRQARATTTEELVRLGAPAAMLRTAAAVRAATLVAVFVPLTWAVASLAAVPLTA
>NZ_CP050177.1|WP_167026400.1|2129627_2130356_+|ATP-binding-cassette-domain-containing-protein
MVAPPDNDVLWARSLHYSHNGSPALTGVSLGVREGDILAVNGPRGSGKSTLLRCLSGQLVPDQGEVWFNSSPVHTMNAVLRERLRRDRFSWIDPEPCLVPELSAWENAALPLLMRGAGHRASKTAAMEWLERLDIGACARKRPHALLQSQRQRVAVARALVTKPSVLFADEPTAPLHQADRAQVLRTLTTAARSHRITVVLATLDPEVATLADRTVSLLDGRRVGSLQPSEAEGQDACSLSV
>NZ_CP050177.1|WP_167026397.1|2128094_2129474_+|aspartate-aminotransferase-family-protein
MGNPIVVSQDLSKTAYDHLWMHFTRMSSYKDAPVPTIVRGEGTYIYDDTGKRYLDGLSGLFVVNAGHGRHELAETAYKQAQELAFFPIWSYAHPNAVELAERLAHYAPGDLNKVFFTTGGGEAVETAWKLAKQYFKLTGKPTKYKVISRAVAYHGTPQGALSITGLPSLKAPFEPLVPGAHKVVNTNIYRAPIFGDDPEAYGRWCADQIEQEILFEGPDTVAAVFLEPVQNAGGCFPPPPGYFRRVREICDQYDVLLVSDEVICAFGRLGTMFACDKFDYVPDMITCAKGMTSGYSPIGACIISDRLAEPFYEGDNTFLHGYTFGGHPVSAAVGLANLDIFEREGLNQHVLDNEGAFFDTLKKLHDLPIVGDVRGNGFFYGIELVKDKATKETFTDEETERVLYGFLSKELFDRGLYCRADDRGDPVVQLAPPLISDQATFDEIEGILRSVLTEAWTKL
>NZ_CP050177.1|WP_167026394.1|2127606_2128110_+|Lrp/AsnC-family-transcriptional-regulator
MASRSADPRPESRSGNGSSPSIDAVSLAIIEQLQEDGRRSYAAIGKAVGLSEAAVRQRVQKLLDQGVMQIVAVTDPLTVGFRRQAMVGINVEGDMDAVADALAAMDECEYVVMTAGSFDLMVEIVCEDDEHLLEVINKRIRALPGVRSTESFIYLKLKKQTYMWGTR
>NZ_CP050177.1|WP_167026391.1|2125982_2127422_-|gamma-aminobutyraldehyde-dehydrogenase
MTTEPRRLRNYINGEFRDAADGRTIDVVDPATGQVYATSPLSGQADVDAAMEAAAAAFPAWRDATPAERQKVLLRIADAVEERAEELIATESENTGKPLEMTRTEEIPPMVDQIRFFAGAARMLEGRSAGEYMEGLTSFVRREPLGVCAQVAPWNYPMMMAVWKFAPALAAGNTVVLKPSDTTPASTLLLAEIIGAIVPQGVFNVLCGDRDTGRLMVEHPTPAMASITGSVRAGAQVAASAAKDVKRVHLELGGKAPVVVFEDVDIAKAVEDIAVAGYFNAGQDCTAACRVLVHESIHDEFVTALAKAAADTKTGAADDEDVLYGPLNNANQLAHVSGFIERLPAHAKVQAGGHRVGDQGYFYAATVVSGLRQDDEIVQQEVFGPVITVQSFTDEEQAVEYANGVDFALASSVWTKDHGRAMRMSKALDFGCVWINTHIPLVAEMPHGGFKQSGYGKDLSGYGFDDYTRIKHVMTSLDS
>NZ_CP050177.1|WP_167026388.1|2124662_2125910_+|beta-lactamase-family-protein
MNTRTRTTRIRTARIRTTRIRTTRIHVTLAAALVLGITAGSPAPAALAAPDTARHAPGATAAPDARALRAALAGLPDADATAALVRVGGTDGVWRGSAGMHDLASGAPADPHARFRAGSVTKVFTAAVVLQLAAEHRVDLGRTVRSYLPDLVPAAYGRVTVRQLLNHTSGIPAADLPGTTPEERYAHRFDVHDPAEMAASALAEEPEFAPGEQQHYLNINYTLLGLLTEKVTGRPYADEVARRVLRPLGLRDTYVPGADPRISGPHNHGYQTFDLPGGGTELRDVTVWNATESWAAGDLISSTADLERFVQALFRGRVVPRPQLAEMFTLPAGSVRQYGSGDPAAYSAGLSVVTLGGRQVWGKTGSRWGYTTAIGATRDLSRTLVYSVNATDAKGEGMNPRALSLMVAAFGEPSA
>NZ_CP050177.1|WP_167026385.1|2123848_2124565_+|response-regulator-transcription-factor
MTIRVVVADDQELVRSGFAMILDAQPDIEVVAEAGDGAAAVRAVRRHRPEVALLDIRMPGTDGIEACRAITSAGGCRTVMLTTFDSDAYVYEALHAGACGFLLKDVRRDDLVHAVRVVAAGDSLLAPSVARRLVEEYVRRSPAPSAVAAASARPDVLTAREHETLLHLARGRSNAEIAAALTLSEHTVKTHVGNVLAKLGLRDRIQAVIHAYETGLIAAGHPSAGGERAADSPVPARD
>NZ_CP050177.1|WP_167036448.1|2122697_2123852_+|sensor-histidine-kinase
MDVGVALLVQAAVTIPFAVPRAASLPPADWPSYGLTTLGVLPLVWRRRAPVTVLLAVLAAQALYGLAWNGPGQTLPYTALLAVYTVAALSPARRRLPAAALTLVLIFPSVAFNSGEARELLFSLLVFGAAYAFGRLSRIRRDYTAAVEDRAAQLERANRIEAEQATARERARIAREMHDILSHAVSIMIVQAEAGPVAVRTAPERAEAAFDAISETGRDAMVQLRRMLGVLREDGSGGGRAAAEPAPPLHPQPTLAELPGLVERVAAGGVEIGCVTAGRPPAPLSLDTQATVYRVVQEALTNVVRHAAAGSVLIRLEYGPDTLEVTVTDDGRGPGDSTGHGLVGVRERVAAHGGTVTAGPGPGGRGFRLAVRLPLVDSRTEVGR
>NZ_CP050177.1|WP_167026382.1|2121804_2122608_+|SAM-dependent-methyltransferase
MTDQDLPEGVRSDVAQNARVWNYWLGGTDNYPVDRTVGDQITSMYPSIGEVARADRAFLGRAVTHLTRDLGVRQFLDLGTGLPTADHTHQVAQRIAPESRVVYVDNDPTVLALARVLLTSTPEGATTYLDADVHQPEQILAGVEPTLDLGKPVAVMMLGILNFVMDTVEAHSIVGRMMDAVPSGSYLVLTHPTLELGGGGNAEAMRFWNEHASPRIVARGRAKILALLSGLELLPPGLVSCSRWRPEPTAEDGVGEVAQFGVVGRKP
>NZ_CP050177.1|WP_167036454.1|2133142_2134186_-|ABC-transporter-ATP-binding-protein
MLSLAGVTVRFGDRKAPRTALDAVDLEVAEHEIVCVLGPSGSGKSTLLRVVAGLQELSGGRVLLDGADQAGVPVHRRGVGLMFQDHQLFPQRDVGGNVAFGLRMRGVSRDEQARRVEELLDLVGLPGAGRRAVSALSGGEQQRVALARALAPRPRLLMLDEPLGQLDRSLRERLVAELRGLFGRLGTTVLAVTHDQGEAFALADRVVVMRDGRVAQSGTPLEVWQRPASAFVARFLGFENVVPATVAGSVADTPWGRVPVPAGSSQGAVTLLVRPGGVRVSAGSGEPGALRCVVAARTFRGSRVGVSLRAGEALLEAECEVGGAPREGEVVGVTFAEDEVVVLPPSR
>NZ_CP050177.1|WP_167036451.1|2134191_2135802_-|iron-ABC-transporter-permease
MAVPVLFFAVFFAYPVTAIVGRGLRSDGVWQFGRVGDVLSRPDILDVLWFTTWQALASTALTLVVALPGAYVFARFDFPGRHLLRAVVTVPFVLPTVVVGTAFLALLGRGGLLDELWGVRLDTTVWAILLAHVFFNYAVVVRTVGGLWSQLDPRQEEAARVLGASRLAAWWRVTLPALGPAVAAAALMVFLFTFTSFGVVQILGGPAYSTLEVEIYRQTAQLLDLPTAAVLTLVQFAAVGAILALHAWTVRRRETALRLVDPALTARRPKGPGQWTLLGVVLTVVLLLILLPLGVLVERSFDGPGGYGLTFYRALTSVGTSGTFLVPPLDAVRTSLEYAVVATAIALAVGGSAAAALTRRAGRLVRGFDALLMLPLGVSAVTVGFGFLITLDKPPLDLRASWILVPLAQALVGVPFVVRTMLPVLRAVDGRLREAAAVLGASPLRAWREVDLPLVRRALLVAAGFAFAVSLGEFGATVFIARPDRPTLPVAVARLLGRPGELNYGQAMALSTVLMVVCAVSLLVLERIRTDRSGEF
>NZ_CP050177.1|WP_167026408.1|2135855_2136965_-|thiamine-ABC-transporter-substrate-binding-protein
MGNKHARTAAGLALVAALGVSTLAACGGSDSPASSGSGGSGTKSKTVTLVSHDSFNASPAVLKAFTKETGYTVKVLKSGDAGEALNKEILTKGSPQGDVFFGVDNTLLSRALDNGLFTPYKAKGLDRVSADSQLDAAKNRVTPIDTGDICVNYDKKYFADKKLAPPQTFDDLVKPQYKNLLVTENVATSSPGLGFLLGTVAHSGDSGWQDYWKKLKANGVQVVDSWEQAYNENFSGSSGGRKAHGDRPLVVSYASSPPAEVLYSEPQPKVAPTGVATGTCFRQIEFAGLLGGAKNEAGGKALLDFLISDRFQADMPLNMFVNPVVASVPLPPLFTEFGATVDQPETVAPDKIAANREQWIQTWTSLVVK
>NZ_CP050177.1|WP_167026411.1|2137238_2138351_-|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MAPPTPGELTFVAPRGAKKPPRHLADLTPAERRDAVAAIGEKPFRAKQLSQHYFARYAHDPEQWTDIPAGARQKLASELLPDLMSVVRHISCDDDTTRKTLWRLHDGTLVESVLMRYPDRVTMCISSQAGCGMNCPFCATGQAGLDRNLSTAEIVHQIVDGMRALRDGEVPGGPARLSNIVFMGMGEPLANYNRVIGAIRRLTDPEPDGLGISQRGITVSTVGLVPAMLRFADEGFKCRLAVSLHAPDDELRDTLVPVNTRWKVPEVLDAAWEYAAKSGRRISIEYAMIRDINDQAWRGDRLGRLLKGKRVHVNLIPLNPTPGSKWTASRPEDEKAFVEAIARHGVPVTVRDTRGQEIDGACGQLAASER
>NZ_CP050177.1|WP_167026415.1|2138520_2139591_-|phosphatidate-cytidylyltransferase
MNDSSWGSPPTADLWGQPDQGAGPAGPAYDEPAAQQTRPMPIVPDGPARGGGQDDDRGAARAGGPVFRDEIAQEPMPAPPPPPQKKRAGRDLRAAIGVGVGLGVVVVASLFIVKAAFVGVVAVAVVVGLWELTSRLDEKKGIKAPLVPLAVGGAAMVVAGYVRGVEGAWVAMALTALAVLVWRMTEQPEGYLRDVTAGVFAAFYVPFLATFVALMLTADDGARRVLMFLLLTVVSDTGAYAVGWRFGTHKLAPRISPGKTREGLLGAVVFAMVAGALCMQFLINDGVWWQGLLLGIAVAASATLGDLGESMIKRDLGIKDMGTLLPGHGGIMDRLDSLLPTAPVVWLLLVIFVGSG
>NZ_CP050177.1|WP_167026418.1|2139590_2140148_-|ribosome-recycling-factor
MIEETLLEAEEKMEKAVLVAKDDFAAIRTGRAHPAMFNKIVADYYGAATPINQLASFSVPEPRMAVVAPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTQDRRKEFIKVAKSKAEDSKISIRAVRRKAKETIDKLVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV
>NZ_CP050177.1|WP_167026421.1|2140305_2141103_-|UMP-kinase
MNKGADATQSADGKDNTVGRSDPAKGAGRFMLKLSGEAFAGGGGLGVDPDVVHAIAREIAAVVRDGAQIAIVLGGGNFFRGAELQQRGMDRARSDYMGMLGTVMNCLALQDFLEKEGIDSRVQTAITMGQVAEPYIPLRAVRHLEKGRVVIFGAGMGMPYFSTDTTAAQRALEIDAEALLMGKNGVDGVYDSDPKTHPGAVKFDALEYSEVIARDLRVADMTAITLCQDNKLPILVFELLTEGNIARAVKGEKIGTLVSDQGTRS
>NZ_CP050177.1|WP_167026424.1|2141260_2142115_-|elongation-factor-Ts
MANYTAADVKKLRELTGAGMMDCKKALDEADGNVDKAVELLRVKGQKGVAKREGRSAENGAVVSLISEDKTSGVLVELKCETDFVAKSDKFITVANTLAAFVASSNPADLGVLLASEIEAGKTVQAYVDEANANLGEKIVLDRFAQFTGGYVAAYMHRTMPDLPPQVGVLVELDKGSASDETAATAAKDVAQHIAAFAPKYLTRDEVPADVVENERRVAEATSREEGKPEAALPKIVEGRVNGFFKDVVVLEQAFAKDNKKSVQKVLDEAGVTLKRFSRIKVGI
>NZ_CP050177.1|WP_167026427.1|2142220_2143168_-|30S-ribosomal-protein-S2
MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHGGSVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFDDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDSKPGEKAVGEPLAEWERDLLEGEKKDDAEKPADDAAVAAEADVQTSAETEKVADAEQVDEAAAPAETEAAAPAADNEQA
>NZ_CP050177.1|WP_167026430.1|2143445_2143991_+|M23-family-metallopeptidase
MRTALLLTLTLLTPSPLTPSAAPTPATPPAVWPVTPASVVRAWDPPASPYGPGHRGIDLAAPPGTPVRAAAAGRVLYAGQVAGRGVLSITLTSPPTKPGAPPLRITYEPVDALVTRGTEVEAGELVARRSLSASHCATECLHWGLRSGDTYLNPVSLLSHSELTRPPPRLLPTLSVPLPKQ

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Crispr_ID: NZ_CP050177_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_7

2159249-2159335

Orphan

Consensus_repeat	Method
TGTCCTCAATCGCCGGACGGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_7

>merge|NZ_CP050177|7|2159249-2159335|CRISPRCasFinder
TGTCCTCAATCGCCGGACGGGCTTGGATCTGTCGCCACGTCCGTGTCCGGGCGCGGGTCACAGATGTCCTCAAACGCCGGACGGGCT

>NZ_CP050177|7|5|2159249-2159335|CRISPRCasFinder
TGTCCTCAATCGCCGGACGGGCT	TGGATCTGTCGCCACGTCCGTGTCCGGGCGCGGGTCACAGA
TGTCCTCAAACGCCGGACGGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_161308525.1\|2154164_2154515_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP050177.1\|WP_167026465.1\|2163619_2163958_-\|P-II-family-nitrogen-regulator	unknown	unknown	gnl\|CDD\|223424
NZ_CP050177.1\|WP_167026477.1\|2168079_2169318_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP050177.1\|WP_167026447.1\|2153309_2154107_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP050177.1\|WP_167026450.1\|2154644_2155466_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP050177.1\|WP_167026468.1\|2163954_2165232_-\|ammonium-transporter	unknown	unknown	gnl\|CDD\|223083
NZ_CP050177.1\|WP_167026456.1\|2158354_2159227_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225139
NZ_CP050177.1\|WP_161308529.1\|2157053_2157647_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026462.1\|2161142_2163602_-\|[protein-PII]-uridylyltransferase	unknown	unknown	gnl\|CDD\|235123
NZ_CP050177.1\|WP_167026474.1\|2167400_2167970_+\|bifunctional-DNA-primase/polymerase	unknown	unknown	gnl\|CDD\|214927
NZ_CP050177.1\|WP_167026459.1\|2159435_2160995_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP050177.1\|WP_161308528.1\|2156381_2156828_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|184724
NZ_CP050177.1\|WP_167026471.1\|2165497_2166973_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026453.1\|2155465_2156041_-\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP050177.1\|WP_167026486.1\|2172481_2176288_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274008
NZ_CP050177.1\|WP_020868149.1\|2156139_2156379_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|179479
NZ_CP050177.1\|WP_167026444.1\|2150341_2151145_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP050177.1\|WP_167026480.1\|2169501_2171034_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|251109
NZ_CP050177.1\|WP_167036460.1\|2151190_2152330_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP050177.1\|WP_167026483.1\|2170946_2172437_-\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_161308525.1\|2154164_2154515_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.22214e-65
NZ_CP050177.1\|WP_167026465.1\|2163619_2163958_-\|P-II-family-nitrogen-regulator	gnl\|CDD\|223424	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism].	3.30961e-50
NZ_CP050177.1\|WP_167026477.1\|2168079_2169318_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	1.5803e-165
NZ_CP050177.1\|WP_167026447.1\|2153309_2154107_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	3.82396e-39
NZ_CP050177.1\|WP_167026450.1\|2154644_2155466_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	7.95842e-133
NZ_CP050177.1\|WP_167026468.1\|2163954_2165232_-\|ammonium-transporter	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	5.2169e-166
NZ_CP050177.1\|WP_167026456.1\|2158354_2159227_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|225139	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane].	3.514e-06
NZ_CP050177.1\|WP_167026462.1\|2161142_2163602_-\|[protein-PII]-uridylyltransferase	gnl\|CDD\|235123	PRK03381, PRK03381, PII uridylyl-transferase; Provisional.	0
NZ_CP050177.1\|WP_167026486.1\|2172481_2176288_-\|AAA-family-ATPase	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
NZ_CP050177.1\|WP_167026459.1\|2159435_2160995_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP050177.1\|WP_161308528.1\|2156381_2156828_-\|30S-ribosomal-protein-S16	gnl\|CDD\|184724	PRK14520, rpsP, 30S ribosomal protein S16; Provisional.	2.40573e-69
NZ_CP050177.1\|WP_167026474.1\|2167400_2167970_+\|bifunctional-DNA-primase/polymerase	gnl\|CDD\|214927	smart00943, Prim-Pol, Bifunctional DNA primase/polymerase, N-terminal. Members of this family adopt a structure consisting of a core of antiparallel beta sheets. They are found in various bacterial hypothetical proteins, and have been shown to harbour both primase and polymerase activities.	3.17378e-19
NZ_CP050177.1\|WP_167026453.1\|2155465_2156041_-\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	5.25171e-65
NZ_CP050177.1\|WP_020868149.1\|2156139_2156379_-\|RNA-binding-protein	gnl\|CDD\|179479	PRK02821, PRK02821, RNA-binding protein.	2.979e-36
NZ_CP050177.1\|WP_167026444.1\|2150341_2151145_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.53321e-44
NZ_CP050177.1\|WP_167026480.1\|2169501_2171034_+\|cytosine-permease	gnl\|CDD\|251109	pfam02133, Transp_cyt_pur, Permease for cytosine/purines, uracil, thiamine, allantoin.	3.79738e-73
NZ_CP050177.1\|WP_167036460.1\|2151190_2152330_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.82997e-43
NZ_CP050177.1\|WP_167026483.1\|2170946_2172437_-\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41936e-147

>NZ_CP050177.1|WP_167026456.1|2158354_2159227_+|methyltransferase-domain-containing-protein
MTRTLVQHHTNAGPPPAVASDTSVRARDWAEIQERMLVPLHEAVYERLEVRAGTRLLGLGCGSGLALLMASARGARVTGVDSDDELLALARTRLAADAELPGRASGSGGAPSGAVLPTSRMSEAALPGGVPYDVITALQPIGCVAGDAKGLGPALDAAIPLAGRGTPVVLTGWGPPERCATAGVLRVAGRLADRLRKGGWRPAYRDDLEEVAARAGLKPDGSGRVSCPFGYADTESAVRGLLSTGVFDGAVRATDRRQVEKEIAEALHPYVRKDGTVWMPNVFRYLIART
>NZ_CP050177.1|WP_161308529.1|2157053_2157647_-|hypothetical-protein
MSTTPPVLAAELAQAWADIQRSHPELPDLAAPESLIGESSSACGAELSFERLLHEAVHGIAAARGVRDTSRAGRYHNRRFLAIAEEMGLDHPEEPHPSSGFSLVSLSPEAKRRYRPTMERLQRALKAHTVATAADTKRSFRGPAARHGSSGGGVRVKAVCDCGRNVRVVPSVLAQAPIVCGGCGKPFRIPEVVAAAS
>NZ_CP050177.1|WP_161308528.1|2156381_2156828_-|30S-ribosomal-protein-S16
MAVKIKLKRLGKIRSPHYRIIVADSRVRRDGRAIEEIGIYHPVQNPSRIEVDSDRARYWLSVGAQPTEPVLAILKLTGDWQAHKGLPAPAPLLQPEPKADKRALFEALTKDGGDEPKGEAITPKAKKADKKADEAGTESSAPAESTEA
>NZ_CP050177.1|WP_020868149.1|2156139_2156379_-|RNA-binding-protein
MLEEALEHLVKGIVDNPDEVQVASRNLRRGRVLEVRVHPDDLGKVIGRNGRTARALRTVVGAIGGRGIRVDLVDVDQVR
>NZ_CP050177.1|WP_167026453.1|2155465_2156041_-|ribosome-maturation-factor-RimM
MQLVVARIGRAHGIKGEVTVEVRTDEPELRLGPGAVLGTEPASAGPLTIATGRVHSGRLLLRFEGVHDRGGAEALRNILLIAEVDPEELPEDPDEFYDHQLMDLDVVLADGTEIGRITEITHLPSQDLFIVERPDGSEVMIPFVEEIVTEIDLEEQRAVIDPPPGLIDELIDELEETDLPEASDPSGKGER
>NZ_CP050177.1|WP_167026450.1|2154644_2155466_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRLDVVTIFPEYLDPLNVSLVGKARARGRLGVHVHDLREWTYDRHNTVDDTPYGGGPGMVMKTEPWGDALDDVLASGYESGAHDPVLVVPTPSGRPFTQETAVALSERPWLIFTPARYEGIDRRVVDEYRTRVPVHEVSIGDYVLAGGEAAVLVITEAVVRLLPGVLGNAESHRDDSFAPGAMADLLEGPVYTKPPEWRGRGIPDVLLSGHHGKIARWRRDEAFERTALNRPDLIERCDPSAFDKKDREILSILGWAPEPGGRFWRRPPAVEE
>NZ_CP050177.1|WP_161308525.1|2154164_2154515_-|50S-ribosomal-protein-L19
MTSLLDAVDASSLRSDLPKFRAGDTVNVHVRVIEGNRSRIQQFKGVVIRRQGSGVRESFTVRKVSFSVGVERTFPVHSPIFEKIELVSRGDVRRAKLYYLRELRGKKAKIKEKRDN
>NZ_CP050177.1|WP_167026447.1|2153309_2154107_-|signal-peptidase-I
MDTEAQHTERDSSSPPLTGPEEESRSARFPRRSWRGAVVLAVVCVTVVLLVSHFVTQPFLIPSGSMEPTLRVGDRVLVDKLAYRSGSVPRRGDVVVFDGTGSFVQEAPRENPVTGLLRGAAAAVGLAEPAETDFVKRVIGVGGDHVVCCDRGGRIEVNGRAVDEPYVYPGDAPSRVPFDIVVPEDTLWVMGDHRDNSRDSRDHLGEPGGGVVPVERVVGRVRWIAFPPGRWSALRPTHVFDGVRSPAGAVQAPGGGQGRRGDGHG
>NZ_CP050177.1|WP_167036460.1|2151190_2152330_-|signal-peptidase-I
MAVGARSGHDDPEEGHGQLAESPAVVTTDSTTEPGRDPLRGGPSGSDPLGGGPSGGDPLGGGPAGSGPSDGDVDSAGDGDGEGQRKQRSFWKELPLLIVIALVLALVIKTFLVQAFSIPSDSMQNTLQRGDRVLVDKLTPWFGSEPERGEVVVFHDPGGWLPETDVPDPNIAQKFLSFIGLMPSAEEKDLIKRVIAVGGDTVECKKGGPVVVNGHPLDEKGFIFAGNTPCDDQPFGPFKVPKDRLWVMGDHRQNSQDSRYHMDNADRGFVPVKDVVGRAVVVAWPLDRLATLPVPDTFDKAGPAQAAGAVASLAAPGALGLAGAVPLVLWRRKRLTSRPVDGSGAHSTGPGGGAGAGGAGDGDSTGAGDSTGVDGGTAG
>NZ_CP050177.1|WP_167026444.1|2150341_2151145_-|signal-peptidase-I
MSGTGRTGGTGRTGPGNGGHGRLGSVLSGLVVAVGCALFLGGFVWGAVEYRPYTVPTDSMSPTVRAGDRVLAQRISGDAVRRGDVVVFRDKQWGDSPMVKRVVGVGGDKVACCDPGGRLTVNGRPIAEPYAAGLPGGRASGADFDATVPAGQLFLLGDQRNVSLDSRVHLEDPGQGSVPRSAVDARVDAVIWPSPGFLGRPAGFAALPGGVSQAGPVRVLVGAVVLGAVLIMLGAAYGPVAERRAKRRRARSGAGRPGGRVTARGGV
>NZ_CP050177.1|WP_167026459.1|2159435_2160995_-|signal-recognition-particle-protein
MFDTLSDRLAATFKSLRGKGRLSPEDIDATAREIRIALLEADVALPVVRAFIAKVKERASGAEVSGALNPSQQVIKIVNEELVGILGGETRRLRFAKTAPTVIMLAGLQGAGKTTLAGKLGLWLKNQGHSPLLVACDLQRPNAVTQLSVVAERAGVAVYAPEPGNGVGDPVKVAKDSIEYARSRQYDIVVVDTAGRLGIDQELMKQASDIRDAVNPDETLFVVDAMIGQDAVNTAEAFRDGVGFDGVVLSKLDGDARGGAALSIAHVTGKQIMFASNGEKLDEFDAFHPDRMASRILDMGDLLTLIEQAEKTFSQAEAEKMAAKLQSSKGGKDFTLDDFLAQMEQVRKMGSISKLLGMLPGMGQIKDQINNIDERDVDRTAAIIKSMTPGERHEPTIINGSRRARIARGSGVEVSAVKNLVERFFEARKMMSKMAQGGGMPGMPGVPGMGGGPGRTKKKQKVAKGKQRSGNPMKRKLDEQAAATRRESGESSPGNAFGLPTGEPDKNFELPDEFKKFMG
>NZ_CP050177.1|WP_167026462.1|2161142_2163602_-|[protein-PII]-uridylyltransferase
MTSLEETTEQADSGPSGYAAARLRLLQEKARSGPPRRAALAKLTDGWLNALFTTAAREAGVRGAALVAVGGYGRGELSPRSDLDLLLLHDGKAGAPAIAALADRVWYPVWDLGLALDHSVRTPAEARKTAGEDLKVQLGLLDARHVAGDLGLVTGVRTAILADWRNQAPKRLPELDELCRERAERQGELQFLLEPDLKEARGGLRDATALRAVAASWLADAPREGLADARRRLLDARDALHLTTGRATDRLALQEQDSVAAELGLLDADALLRQVYEAARTVSYASDVTWREVNRVLRSRGARPRLRAMLGSKPAPERTPLAEGVVEQDGEVVLARTARVERDLVLPLRAAAAAAQAGLPISLHAVRRLAAAAKPLPVPWPAEAREELVKLLGAGESTVPVWEALEAEGLITQLLPDWERVRCRPQRNPVHTWTVDRHLVETAVQASSLTRRVHRPDLLLVSALLHDIGKGWPGDHSVAGEVIARDVASRIGFDRDDMAVIATVVRHHLLLVDTATRRDLDDPATVDSVAARVGSLGTLELLHALTEADALATGPAAWSTWRAGLVADLVRRVAAVLAGDEVPEPEPTAPSAEQERLAVEALRTGEPVLALHAPQTEPPPEADPDADPEPVGVELLIALRDRPGVLPAAAGVLALHRLTVRAADLRAVELPTELGESSDVLLLSWRVAAEYGSLPQAARLRADLVRALDGTLDIPARLAEREAAYPRRRGVKAPPPRVTVAPTASRHATVIEVRAQDAPGLLHRIGRALEEAAVRVRSAHVSTLGANAVDTVYVTRADGSRLPEADAAALAKSLEEALR
>NZ_CP050177.1|WP_167026465.1|2163619_2163958_-|P-II-family-nitrogen-regulator
MKLITAVVKPHRLDEIKEALQAFGIQGLTVTEASGYGRQRGHTEVYRGAEYTVDLVPKIRIEVLVEDSDAEELIEVVVKAARTGKIGDGKVWSVPVDTAVRVRTGERGPDAL
>NZ_CP050177.1|WP_167026468.1|2163954_2165232_-|ammonium-transporter
MNGADTAFVLISAALVMLMTPGLAFFYGGMVRVKSALNMLMMSMSALAVVSVLWVLYGYSLTFGDDIGGGLLGNFDHIGLKGITADTLTGGKEGIPVFAFALFQLMFAVITPALMSGALADRVKFSSWTLFIALWVSVVYFPIAHWVWQSDGWLFKLGVIDFAGGTAVHINAGIGGLAAVLVVGKRIGFKKDPMRPHSLPLVVLGAGLLWFGWFGFNAGSALAANGTAAIMAFNTQIATAAAMIGWLAYERIRHGAFTTLGAASGAVAGLVAITPSGAAVNPFGALLIGVVAGAVCSWAVSLKYKLGYDDSLDVVGVHLVGGLIGTLLVGVLAINGVGGLSQLGKQAAGAFSVMAYSFVVTWILAKLVDKTIGFRASEDDETSGVDMAFHAESAYDFSALGGSPSGRSSVPADLAGAAKNKKVDA
>NZ_CP050177.1|WP_167026471.1|2165497_2166973_-|hypothetical-protein
MGGSGASGTNSGKSPNGQLGSWFVRSGWSKGELARQVNRRAREMGAHHISTDTSRVRRWLDGEQPREPIPRILSELFSERFGTVVAVEDLGLRTAHQSPSVSGVDLPWAGPQTVSLLSEFSRSDLMLARRGFLGSSLALAAGPSLVEPMQRWLVPTPAVEREQPGTEDTGGRPSRLSRPELDLLESTTAMFRQWDAQCGGGLRRKAVVGQLHEVTDLLQEPQPQETSRRLFRCAAELAELAGWMSYDVGLQPNAQKYFVLALHAAKEAGDKPLGSYILSSMSRQMIHLGRPDDALELIHLAQYGSRDCATSRTQAMLYAMEARAYANMGQPSKCKRAVRMAEETFADVGLDGEPEPDWIRFFSEAELNGENAHSYRDLAYVAGRSPTYASLAEPVMRRAVELFEHDREHQRSYALNLIGMATVHLLKREPEESAALAQTALDAAKKVRSERVNNRLRKTVDTAARDFGDVAEIAYLTDRLSTQLPESAEAV
>NZ_CP050177.1|WP_167026474.1|2167400_2167970_+|bifunctional-DNA-primase/polymerase
MGFTIGGTRRRGRTTECTAVAEYTGLWGWDVAPGSPEGPGDEVPAGATLADVTKAWSDTPGAPVLLPVGRSFDVIDVSATAGSRALVRLERMGLPLGPVLATPCGRAYFFVAPGAAAELPQLLYRMGWDDAGLDLRCQGSGHVPAPPTEIAGQGPVRWLRPPSLDTAATPPQARLLLGTLAYICHRSAA
>NZ_CP050177.1|WP_167026477.1|2168079_2169318_-|signal-recognition-particle-docking-protein-FtsY
MEIVILVVVIALVAVGAISGLVVSSRKKKQLPPRAPSSAPTLTAPPAEPHVGDEAETPRDEPRRTIEEVGLPDASDVTGAPVAVEDPVVGAPPAVEIEIPEPTAGRLVRLRARLSRSQNALGKGLLTLLSREHLDDDTWDEIEETLLTADVGVAPTQELVGRLRERVRVLGTRTPGELRTLLREELVALLDVGADREDFDRTVRTESVLDTPAVVMVVGVNGTGKTTTTGKLARVLVADGKSVVLGAADTFRAAAADQLQTWGQRVGARTVRGPEGGDPASVAFDAVKEGIAEGADVVLIDTAGRLHTKTGLMDELGKVKRVVEKHGPLDEVLLVLDATTGQNGLVQARVFAEVVDITGIVLTKLDGTAKGGIVIAVQRELGVPVKLVGLGEGADDLAPFEAGAFVDALIGE
>NZ_CP050177.1|WP_167026480.1|2169501_2171034_+|cytosine-permease
MPHASASEGASAPRGAMETRGLEPVPDGARTGRVRELFPTWVAANISVLLLTLGAGLVVFNGLNLWQVLVVGCVAPAVSYGLVGLISLAGKRGGSPGMALSRAVFGRRGNLFPGSVIWVARWGWETINAVTGAYAVLTVLDLLFGVGPSTPLIVVTLLLFVAGTFLVSGLGIKALRVCSRWAAYLFGAFSVLVLVYLVGHTDWSAVLSRPAGSTAAMIAGIGTLAAGGLSWAPTGPDFTRYLPRASSGRAVVGRTVGGAAVVVVPLVVMGAVMAVGTPGLAHARDPVSFIGGLLPAWIAVPYLLMALVGMVLINAMSMYSAGFTAQTLGIKVPRAWAVSVNAVISLVLGFLLMVVATGFLGSFVAFLTLLAVAFSAWIGVFGTDMLRRRTYDGAALMDATRTGAYWYRGGFAPSAMVAWAAALVVGLLFTDVEWFSGPLASTWIGANGLGWVATTVVASALYAVLPRARPRIRKADTPGDAPYPISSSVLPLVSLTKSSTNGSDSAAKQV
>NZ_CP050177.1|WP_167026483.1|2170946_2172437_-|sugar-porter-family-MFS-transporter
MPRYAPLWGIATPHPATPGAPGVHVTSTTKVQPSDGNTPRPDHLRHVIYITTAAAMGGFLFGYDSSVINGAVQGIRGRYDIGSLPLAQVVAVALLGSAIGAATAGRIADRIGRLHCMRISSVLFTVSAVGSALPFDIYDLAVWRVIGGFAIGMASVIGPAYIAEVSPAAYRGRFGSFQQGAIVLGIAISQLVNYGILQLADGDQRGNLAGLEAWQWMLGVMVVPAITYGVLSFTIPESPRFLISVGREPEAKKVLASVEDKNVDLDARVAEIELAMRREHKSTFKDLLNGRNFLPIVWVGIGLSAFQQLVGINVAFYYSATLWQSVGINPSSSFLYSFTTSIVNIIGTIIAISLVDRVGRKPLAIVGSCGMTVALAFEAWAFSAHLVDGKLPSTQGTTALVAAHVFVLFFALSWGVIVWVLLGEMFPNKIRAAALGVAASAQWIANYAITASFPSLSADWSLSGTYIIYTCFAALSLPFVLLFVKETKGKTLEEMG
>NZ_CP050177.1|WP_167026486.1|2172481_2176288_-|AAA-family-ATPase
MHLKAMTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGKMEDVIFAGTTGRPPLGRAEVSLTIDNSDGALPIDYAEVTITRIMFRNGGSEYQLNGDTCRLLDIQELLSDSGIGREMHVIVGQGQLDSVLHADPMGRRAFIEEAAGVLKHRKRKEKALRKLDSMQANLARVQDLTDELRRQLKPLGRQAAVARRAAVIQADLRDARLRLLADDLVRLREALRTEIADEAELKRRKEEAEGRLKAALTRETELEDEVRRLAPRLQRAQQTWYELSQLAERVRGTVSLADARVKSATAPPTDDRRGREPEDMEREAARIREQEAELEAALEAAEHALEDTVAHRSELERALAVEERRLKDVARAIADRREGLARLAGQVNAARGRAASARAEIGRLAEARDAARERAATAQEEYEQLKAEVDGLDAEDEDLAERYAAAREALAAAEAGLTAAREAATGADRERAAVAARHDALALGLRRKDGSGALLAARDRLTGLLGPAAELLTVTPGHEIPVAAALGAAADAIAVSTPRAAAAAIRLLRTEDGGRASLLLTGSPTGVPAQAVSTEDAPEAGLARPPAPPRPQSPDGLERADAHAHPAGPAFEDTPAGKGAIQARPAIEDTFAAGGGETVQARPAIEDVLFAGGGRVRAQRVADLVRGPRELMDAVRFLVRDAVVVGTLEDAEELVTADPRLVAVTAEGDLLGAHFAHGGSAGAPSLLEVQASVDEAAAALHDLDTRSEELAKAQATATTTRAECAALVDELGDLRRAADRAKSAVSGQLGRLSGQARGAAGEAERTASAAAKAEDALERATEEAEELAERLLVAQEAGDGTEDEPDTAVRDRLAADGANARQTEMEARLQVRTHEERVKGLAGRADALDRGARAEREARARAEQRRARLRHEARVAGAVASGARQLLAHVEVSVVRAEAERTAAEAAKSERERDLVTERTQGRDLKAELDKLTDSVHRGEVLGAEKRMRIEQLEAKALEELGIEPAGLVAEYGPDQLVPPSQPAEGETLPDDPEDPRNRPRPYARAEQEKRLKAAERAYQQLGKVNPLALEEFAALEERHQFLSEQLEDLKKTRTDLLLVVKEVDERVEQVFTEAYRDTAREFEGVFSRLFPGGEGRLILTDPDHMLTTGVDVEARPPGKKVKRLSLLSGGERSLTAVALLVSIFKARPSPFYVMDEVEAALDDTNLQRLIRIMQELQESSQLIVITHQKRTMEVADALYGVSMQGDGVSKVISQRLR

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Crispr_ID: NZ_CP050177_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_8

2174318-2174445

Orphan

Consensus_repeat	Method
GTCCTCAATCGCCGGACGGGCTTGAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP050177_8

>merge|NZ_CP050177|8|2174318-2174445|CRISPRCasFinder
GTCCTCAATCGCCGGACGGGCTTGAACGGTCTCGCCGCCTCCGGCGGCAAAGGTGTCCTCAATCGCCGGACGGGCTTGAATGGCGCCCTTGCCCGCGGGCGTGTCCTCGAACGCCGGACCCGCTGGGT

>NZ_CP050177|8|6|2174318-2174445|CRISPRCasFinder
GTCCTCAATCGCCGGACGGGCTTGAA	CGGTCTCGCCGCCTCCGGCGGCAAAGGT
GTCCTCAATCGCCGGACGGGCTTGAA	TGGCGCCCTTGCCCGCGGGCGT
GTCCTCGAACGCCGGACCCGCTGGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167026498.1\|2178465_2179326_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	unknown	unknown	gnl\|CDD\|234899
NZ_CP050177.1\|WP_167026513.1\|2183199_2183784_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|367574
NZ_CP050177.1\|WP_167026465.1\|2163619_2163958_-\|P-II-family-nitrogen-regulator	unknown	unknown	gnl\|CDD\|223424
NZ_CP050177.1\|WP_167026477.1\|2168079_2169318_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP050177.1\|WP_167026468.1\|2163954_2165232_-\|ammonium-transporter	unknown	unknown	gnl\|CDD\|223083
NZ_CP050177.1\|WP_167026456.1\|2158354_2159227_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225139
NZ_CP050177.1\|WP_167026501.1\|2179499_2180414_-\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_CP050177.1\|WP_167026507.1\|2181416_2182595_-\|cell-division-initiation-protein	unknown	unknown	gnl\|CDD\|349951
NZ_CP050177.1\|WP_167026462.1\|2161142_2163602_-\|[protein-PII]-uridylyltransferase	unknown	unknown	gnl\|CDD\|235123
NZ_CP050177.1\|WP_167026471.1\|2165497_2166973_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026459.1\|2159435_2160995_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP050177.1\|WP_167026474.1\|2167400_2167970_+\|bifunctional-DNA-primase/polymerase	unknown	unknown	gnl\|CDD\|214927
NZ_CP050177.1\|WP_167026495.1\|2177534_2178434_+\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|349398
NZ_CP050177.1\|WP_167026510.1\|2182693_2183203_-\|pantetheine-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|234674
NZ_CP050177.1\|WP_167026483.1\|2170946_2172437_-\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917
NZ_CP050177.1\|WP_167026480.1\|2169501_2171034_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|251109
NZ_CP050177.1\|WP_003965982.1\|2180433_2180607_-\|50S-ribosomal-protein-L32	unknown	unknown	gnl\|CDD\|237038
NZ_CP050177.1\|WP_167026504.1\|2180609_2181326_-\|DUF177-domain-containing-protein	unknown	unknown	gnl\|CDD\|376863
NZ_CP050177.1\|WP_167026492.1\|2177106_2177388_-\|acylphosphatase	unknown	unknown	gnl\|CDD\|237712
NZ_CP050177.1\|WP_167026489.1\|2176499_2176718_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167026513.1\|2183199_2183784_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|367574	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95.	6.00854e-65
NZ_CP050177.1\|WP_167026465.1\|2163619_2163958_-\|P-II-family-nitrogen-regulator	gnl\|CDD\|223424	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism].	3.30961e-50
NZ_CP050177.1\|WP_167026477.1\|2168079_2169318_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	1.5803e-165
NZ_CP050177.1\|WP_167026468.1\|2163954_2165232_-\|ammonium-transporter	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	5.2169e-166
NZ_CP050177.1\|WP_167026456.1\|2158354_2159227_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|225139	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane].	3.514e-06
NZ_CP050177.1\|WP_167026501.1\|2179499_2180414_-\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	5.1427e-119
NZ_CP050177.1\|WP_167026507.1\|2181416_2182595_-\|cell-division-initiation-protein	gnl\|CDD\|349951	cd06503, ATP-synt_Fo_b, F-type ATP synthase, membrane subunit b. Membrane subunit b is a component of the Fo complex of FoF1-ATP synthase. The F-type ATP synthases (FoF1-ATPase) consist of two structural domains: the F1 (assembly factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha (or A), beta (B), gamma (C), delta (D) and epsilon (E) subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons through the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Candidatus Methanoperedens.	5.51546e-06
NZ_CP050177.1\|WP_167026462.1\|2161142_2163602_-\|[protein-PII]-uridylyltransferase	gnl\|CDD\|235123	PRK03381, PRK03381, PII uridylyl-transferase; Provisional.	0
NZ_CP050177.1\|WP_167026459.1\|2159435_2160995_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP050177.1\|WP_167026474.1\|2167400_2167970_+\|bifunctional-DNA-primase/polymerase	gnl\|CDD\|214927	smart00943, Prim-Pol, Bifunctional DNA primase/polymerase, N-terminal. Members of this family adopt a structure consisting of a core of antiparallel beta sheets. They are found in various bacterial hypothetical proteins, and have been shown to harbour both primase and polymerase activities.	3.17378e-19
NZ_CP050177.1\|WP_167026498.1\|2178465_2179326_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	3.48659e-149
NZ_CP050177.1\|WP_167026510.1\|2182693_2183203_-\|pantetheine-phosphate-adenylyltransferase	gnl\|CDD\|234674	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional.	7.2196e-100
NZ_CP050177.1\|WP_167026483.1\|2170946_2172437_-\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41936e-147
NZ_CP050177.1\|WP_167026480.1\|2169501_2171034_+\|cytosine-permease	gnl\|CDD\|251109	pfam02133, Transp_cyt_pur, Permease for cytosine/purines, uracil, thiamine, allantoin.	3.79738e-73
NZ_CP050177.1\|WP_167026492.1\|2177106_2177388_-\|acylphosphatase	gnl\|CDD\|237712	PRK14422, PRK14422, acylphosphatase; Provisional.	1.30365e-51
NZ_CP050177.1\|WP_167026504.1\|2180609_2181326_-\|DUF177-domain-containing-protein	gnl\|CDD\|376863	pfam02620, DUF177, Uncharacterized ACR, COG1399. This family is nearly universally conserved in bacteria and plants except the Chlorophyceae algae. Thus far, mutantional analysis in bacteria have not established a function. In contrast, mutants have embryo lethal phenotypes in maize and Arabidopsis. In maize, the mutant embryos arrest at an early transition stage.It has been suggested that family members specifically affect 23S rRNA accumulation in plastids as well as bacteria.	3.48873e-31
NZ_CP050177.1\|WP_167026495.1\|2177534_2178434_+\|CAP-domain-containing-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	1.77929e-46
NZ_CP050177.1\|WP_003965982.1\|2180433_2180607_-\|50S-ribosomal-protein-L32	gnl\|CDD\|237038	PRK12286, rpmF, 50S ribosomal protein L32; Reviewed.	5.89913e-26

>NZ_CP050177.1|WP_167026483.1|2170946_2172437_-|sugar-porter-family-MFS-transporter
MPRYAPLWGIATPHPATPGAPGVHVTSTTKVQPSDGNTPRPDHLRHVIYITTAAAMGGFLFGYDSSVINGAVQGIRGRYDIGSLPLAQVVAVALLGSAIGAATAGRIADRIGRLHCMRISSVLFTVSAVGSALPFDIYDLAVWRVIGGFAIGMASVIGPAYIAEVSPAAYRGRFGSFQQGAIVLGIAISQLVNYGILQLADGDQRGNLAGLEAWQWMLGVMVVPAITYGVLSFTIPESPRFLISVGREPEAKKVLASVEDKNVDLDARVAEIELAMRREHKSTFKDLLNGRNFLPIVWVGIGLSAFQQLVGINVAFYYSATLWQSVGINPSSSFLYSFTTSIVNIIGTIIAISLVDRVGRKPLAIVGSCGMTVALAFEAWAFSAHLVDGKLPSTQGTTALVAAHVFVLFFALSWGVIVWVLLGEMFPNKIRAAALGVAASAQWIANYAITASFPSLSADWSLSGTYIIYTCFAALSLPFVLLFVKETKGKTLEEMG
>NZ_CP050177.1|WP_167026480.1|2169501_2171034_+|cytosine-permease
MPHASASEGASAPRGAMETRGLEPVPDGARTGRVRELFPTWVAANISVLLLTLGAGLVVFNGLNLWQVLVVGCVAPAVSYGLVGLISLAGKRGGSPGMALSRAVFGRRGNLFPGSVIWVARWGWETINAVTGAYAVLTVLDLLFGVGPSTPLIVVTLLLFVAGTFLVSGLGIKALRVCSRWAAYLFGAFSVLVLVYLVGHTDWSAVLSRPAGSTAAMIAGIGTLAAGGLSWAPTGPDFTRYLPRASSGRAVVGRTVGGAAVVVVPLVVMGAVMAVGTPGLAHARDPVSFIGGLLPAWIAVPYLLMALVGMVLINAMSMYSAGFTAQTLGIKVPRAWAVSVNAVISLVLGFLLMVVATGFLGSFVAFLTLLAVAFSAWIGVFGTDMLRRRTYDGAALMDATRTGAYWYRGGFAPSAMVAWAAALVVGLLFTDVEWFSGPLASTWIGANGLGWVATTVVASALYAVLPRARPRIRKADTPGDAPYPISSSVLPLVSLTKSSTNGSDSAAKQV
>NZ_CP050177.1|WP_167026477.1|2168079_2169318_-|signal-recognition-particle-docking-protein-FtsY
MEIVILVVVIALVAVGAISGLVVSSRKKKQLPPRAPSSAPTLTAPPAEPHVGDEAETPRDEPRRTIEEVGLPDASDVTGAPVAVEDPVVGAPPAVEIEIPEPTAGRLVRLRARLSRSQNALGKGLLTLLSREHLDDDTWDEIEETLLTADVGVAPTQELVGRLRERVRVLGTRTPGELRTLLREELVALLDVGADREDFDRTVRTESVLDTPAVVMVVGVNGTGKTTTTGKLARVLVADGKSVVLGAADTFRAAAADQLQTWGQRVGARTVRGPEGGDPASVAFDAVKEGIAEGADVVLIDTAGRLHTKTGLMDELGKVKRVVEKHGPLDEVLLVLDATTGQNGLVQARVFAEVVDITGIVLTKLDGTAKGGIVIAVQRELGVPVKLVGLGEGADDLAPFEAGAFVDALIGE
>NZ_CP050177.1|WP_167026474.1|2167400_2167970_+|bifunctional-DNA-primase/polymerase
MGFTIGGTRRRGRTTECTAVAEYTGLWGWDVAPGSPEGPGDEVPAGATLADVTKAWSDTPGAPVLLPVGRSFDVIDVSATAGSRALVRLERMGLPLGPVLATPCGRAYFFVAPGAAAELPQLLYRMGWDDAGLDLRCQGSGHVPAPPTEIAGQGPVRWLRPPSLDTAATPPQARLLLGTLAYICHRSAA
>NZ_CP050177.1|WP_167026471.1|2165497_2166973_-|hypothetical-protein
MGGSGASGTNSGKSPNGQLGSWFVRSGWSKGELARQVNRRAREMGAHHISTDTSRVRRWLDGEQPREPIPRILSELFSERFGTVVAVEDLGLRTAHQSPSVSGVDLPWAGPQTVSLLSEFSRSDLMLARRGFLGSSLALAAGPSLVEPMQRWLVPTPAVEREQPGTEDTGGRPSRLSRPELDLLESTTAMFRQWDAQCGGGLRRKAVVGQLHEVTDLLQEPQPQETSRRLFRCAAELAELAGWMSYDVGLQPNAQKYFVLALHAAKEAGDKPLGSYILSSMSRQMIHLGRPDDALELIHLAQYGSRDCATSRTQAMLYAMEARAYANMGQPSKCKRAVRMAEETFADVGLDGEPEPDWIRFFSEAELNGENAHSYRDLAYVAGRSPTYASLAEPVMRRAVELFEHDREHQRSYALNLIGMATVHLLKREPEESAALAQTALDAAKKVRSERVNNRLRKTVDTAARDFGDVAEIAYLTDRLSTQLPESAEAV
>NZ_CP050177.1|WP_167026468.1|2163954_2165232_-|ammonium-transporter
MNGADTAFVLISAALVMLMTPGLAFFYGGMVRVKSALNMLMMSMSALAVVSVLWVLYGYSLTFGDDIGGGLLGNFDHIGLKGITADTLTGGKEGIPVFAFALFQLMFAVITPALMSGALADRVKFSSWTLFIALWVSVVYFPIAHWVWQSDGWLFKLGVIDFAGGTAVHINAGIGGLAAVLVVGKRIGFKKDPMRPHSLPLVVLGAGLLWFGWFGFNAGSALAANGTAAIMAFNTQIATAAAMIGWLAYERIRHGAFTTLGAASGAVAGLVAITPSGAAVNPFGALLIGVVAGAVCSWAVSLKYKLGYDDSLDVVGVHLVGGLIGTLLVGVLAINGVGGLSQLGKQAAGAFSVMAYSFVVTWILAKLVDKTIGFRASEDDETSGVDMAFHAESAYDFSALGGSPSGRSSVPADLAGAAKNKKVDA
>NZ_CP050177.1|WP_167026465.1|2163619_2163958_-|P-II-family-nitrogen-regulator
MKLITAVVKPHRLDEIKEALQAFGIQGLTVTEASGYGRQRGHTEVYRGAEYTVDLVPKIRIEVLVEDSDAEELIEVVVKAARTGKIGDGKVWSVPVDTAVRVRTGERGPDAL
>NZ_CP050177.1|WP_167026462.1|2161142_2163602_-|[protein-PII]-uridylyltransferase
MTSLEETTEQADSGPSGYAAARLRLLQEKARSGPPRRAALAKLTDGWLNALFTTAAREAGVRGAALVAVGGYGRGELSPRSDLDLLLLHDGKAGAPAIAALADRVWYPVWDLGLALDHSVRTPAEARKTAGEDLKVQLGLLDARHVAGDLGLVTGVRTAILADWRNQAPKRLPELDELCRERAERQGELQFLLEPDLKEARGGLRDATALRAVAASWLADAPREGLADARRRLLDARDALHLTTGRATDRLALQEQDSVAAELGLLDADALLRQVYEAARTVSYASDVTWREVNRVLRSRGARPRLRAMLGSKPAPERTPLAEGVVEQDGEVVLARTARVERDLVLPLRAAAAAAQAGLPISLHAVRRLAAAAKPLPVPWPAEAREELVKLLGAGESTVPVWEALEAEGLITQLLPDWERVRCRPQRNPVHTWTVDRHLVETAVQASSLTRRVHRPDLLLVSALLHDIGKGWPGDHSVAGEVIARDVASRIGFDRDDMAVIATVVRHHLLLVDTATRRDLDDPATVDSVAARVGSLGTLELLHALTEADALATGPAAWSTWRAGLVADLVRRVAAVLAGDEVPEPEPTAPSAEQERLAVEALRTGEPVLALHAPQTEPPPEADPDADPEPVGVELLIALRDRPGVLPAAAGVLALHRLTVRAADLRAVELPTELGESSDVLLLSWRVAAEYGSLPQAARLRADLVRALDGTLDIPARLAEREAAYPRRRGVKAPPPRVTVAPTASRHATVIEVRAQDAPGLLHRIGRALEEAAVRVRSAHVSTLGANAVDTVYVTRADGSRLPEADAAALAKSLEEALR
>NZ_CP050177.1|WP_167026459.1|2159435_2160995_-|signal-recognition-particle-protein
MFDTLSDRLAATFKSLRGKGRLSPEDIDATAREIRIALLEADVALPVVRAFIAKVKERASGAEVSGALNPSQQVIKIVNEELVGILGGETRRLRFAKTAPTVIMLAGLQGAGKTTLAGKLGLWLKNQGHSPLLVACDLQRPNAVTQLSVVAERAGVAVYAPEPGNGVGDPVKVAKDSIEYARSRQYDIVVVDTAGRLGIDQELMKQASDIRDAVNPDETLFVVDAMIGQDAVNTAEAFRDGVGFDGVVLSKLDGDARGGAALSIAHVTGKQIMFASNGEKLDEFDAFHPDRMASRILDMGDLLTLIEQAEKTFSQAEAEKMAAKLQSSKGGKDFTLDDFLAQMEQVRKMGSISKLLGMLPGMGQIKDQINNIDERDVDRTAAIIKSMTPGERHEPTIINGSRRARIARGSGVEVSAVKNLVERFFEARKMMSKMAQGGGMPGMPGVPGMGGGPGRTKKKQKVAKGKQRSGNPMKRKLDEQAAATRRESGESSPGNAFGLPTGEPDKNFELPDEFKKFMG
>NZ_CP050177.1|WP_167026456.1|2158354_2159227_+|methyltransferase-domain-containing-protein
MTRTLVQHHTNAGPPPAVASDTSVRARDWAEIQERMLVPLHEAVYERLEVRAGTRLLGLGCGSGLALLMASARGARVTGVDSDDELLALARTRLAADAELPGRASGSGGAPSGAVLPTSRMSEAALPGGVPYDVITALQPIGCVAGDAKGLGPALDAAIPLAGRGTPVVLTGWGPPERCATAGVLRVAGRLADRLRKGGWRPAYRDDLEEVAARAGLKPDGSGRVSCPFGYADTESAVRGLLSTGVFDGAVRATDRRQVEKEIAEALHPYVRKDGTVWMPNVFRYLIART
>NZ_CP050177.1|WP_167026489.1|2176499_2176718_-|hypothetical-protein
MAKALLGYVGGSDPRLLAEMRRLQQRVQDLESELVRIQSENDALNAAVAQHPGDSLFENMDIEVHQAEPALT
>NZ_CP050177.1|WP_167026492.1|2177106_2177388_-|acylphosphatase
MNDDVRLTAWVRGRVQGVGFRWFTRANALEIGGLTGFALNLDDGRVQVVAEGAREKCHGLLDWLRSGDTPGRVDGVTEIWSTPRGGYDTFAIR
>NZ_CP050177.1|WP_167026495.1|2177534_2178434_+|CAP-domain-containing-protein
MGRHSRSAAVPAAVDYADATAGRHRGGARRKRRVAAPVRTGLLGASAAMAVGAVAVASGLLPGGDQYNVGGGPTGEQVRTEGAPDLLVQGSPSAEPTELPSASASPSAPGRVPTTPAKKPAASPSKPAAEVSRKAKAPVTRAPETKKAEAPATKAPEPEQTTQRAAESQGQGPAAASAATAVLSLVNQERAKVGCAPVKADSSLAGLAQDFSQDMAARGFFDHTDPDGKTPWDRADQAGVKKLGGENIARGQADAQAVMDSWMNSEGHRANILNCDYTRLGVGVVTGTGGPWWTQDFGF
>NZ_CP050177.1|WP_167026498.1|2178465_2179326_-|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase
MPELPEVEVVRRGLERWISGRTVVATEVLHPRAVRRHLAGGEDFAARLQGHTIGTARRRGKYLWLPLADTDASILGHLGMSGQLLVQPETTPDEKHLRIRIRFADSLGTELRFVDQRTFGGLSLHDNSPDGVPDVIAHIARDPLDPAFDDDAFLKALRLRRTTVKRALLDQSLISGVGNIYADEALWRAKLHYERPTATLPRPRAAELLGHARDVMNGALAVGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPCRRCGTPIRRRPWMNRSSYFCPHCQRPPRAAA
>NZ_CP050177.1|WP_167026501.1|2179499_2180414_-|ribonuclease-III
MSELSTAKKQADNVSTASSPTLLEGRLGYQLESALLVRALTHRSFAYENGGLPTNERLEFLGDSVLGLVVTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGSFIRLGRGEEGTGGRDKASILADTLEAVIGAVYLDQGLDAASELVHRLFDPLIEKSSNLGAGLDWKTSLQELTAAESLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWRSIRTVADERAAAEKNVVHIEGADPAPETPGLPGAGDPTDADSGGGTDTGAAEAGIPADSASADAAKA
>NZ_CP050177.1|WP_003965982.1|2180433_2180607_-|50S-ribosomal-protein-L32
MAVPKRKMSRSNTRHRRSQWKAAVPTLVSCERCQEPKLQHIACPSCGTYNKRQVLEV
>NZ_CP050177.1|WP_167026504.1|2180609_2181326_-|DUF177-domain-containing-protein
MSAARAALFVPTTLRRPLHDPKVGTALNARLDHRDPLVFDTHELGRRPGALRKLARTVPAPKDFGIGGVIGTPEGGPVELTLRIESVMEGVLVTGTARATAEGECVRCLEPLDQQVEADFQELFSYHDADDRGRTRAEPGDDAEDDEDTLFIEDGLFDLEPVLRDAVVLALPMQPVCRETCAGLCSECGIRLDENPGHHHDAVDIRWAALQGLAETVKDGEKDNMGGAAAGVDEKQEK
>NZ_CP050177.1|WP_167026507.1|2181416_2182595_-|cell-division-initiation-protein
MDVQKKLDEIVDTVGSARSMPMSASCVVNRAELLAMLEEVRDALPGSLAQAQELLGGHEQLAVQARQEADRIIGAAHAERSTLISETAVARRAQEEADRILSEARRDAAEVKAEADDYVDSKLANFEVVLTKTIGSVDRGREKLLGRDPGRGEQGYGPEDGDADDAPEYSADPETLIRRADEYVDAKIGAFEAVLSKTLEAVGRGRQKLLGRTEIDDLAAHLAAQDAAGPQMRTSDADHWADLAELPREQPAGQEQAAAQVPQIPAQQPYTDPAYGQPAAAAYQDTGYQDPAYPDQAYAGYGQQDTYGGGYQQDPYAYQQQPPVTQGYGQDQGQAQGYDPAYGWQQPAGAPPVPQHQPGQAHPDQQGALDETSLFDTSMIDLDQLRRYEQGR
>NZ_CP050177.1|WP_167026510.1|2182693_2183203_-|pantetheine-phosphate-adenylyltransferase
MTGPESEGNQLRRAVCPGSFDPITNGHLDIIARASKLYDVVHVAVMINQSKKGLFSVEERIDLIREVTSEFGNVEVESFHGLLVDFCKQRDIPAIVKGLRAVSDFDYELQMAQMNHGLSGVETLFVPTNPVYSFLSSSLVKEVATWGGDVSHLIPPAVHRALAARLGTS
>NZ_CP050177.1|WP_167026513.1|2183199_2183784_-|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MTRVIAGSAGGRRLAVPPGTGTRPTSDRAREGLFSSWGSLLGTLDGVRVADLYAGSGAIGLEALSRGAAHALLVESDPRAARTVRDNVRTLGLPGAEVRTGKAEQIVTGPAPDAPYDLVFLDPPYAVTDDDLREILLTLRTQGWLTGDAVATVERSTRGGEFGWPEGFEPVRSRRYGEGTFWYGRAASTCEDAP

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Crispr_ID: NZ_CP050177_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_9

2286869-2287084

Orphan

Consensus_repeat	Method
AGCCCGTCCGGCGATTGAGGACGTCTTTGACC	CRT

3 spacers

The CRISPR arrays of NZ_CP050177_9

>merge|NZ_CP050177|9|2286869-2287084|CRT
AGCCCGTCCGGCGATTGAGGACGTCTTTGACCCGCACGGGACATCGGGCGCAACAATTCCAGCCCGTCCGGCGATTGAGGACATCTTTGACCGCAACGGTCACGCCCGACCGCAACCCCCTCAAGCCCGTCCGGCGATTGAGGACGTCCTTGACCCGCACGGGCAACGGGCCCGAGCCAACCCCAGCCCGTCCGGCGATTGAGGACGAGTGGGTGC

>NZ_CP050177|9|1|2286869-2287084|CRT
AGCCCGTCCGGCGATTGAGGACGTCTTTGACC	CGCACGGGACATCGGGCGCAACAATTCC
AGCCCGTCCGGCGATTGAGGACATCTTTGACC	GCAACGGTCACGCCCGACCGCAACCCCCTCA
AGCCCGTCCGGCGATTGAGGACGTCCTTGACC	CGCACGGGCAACGGGCCCGAGCCAACCCC
AGCCCGTCCGGCGATTGAGGACGAGTGGGTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167026713.1\|2287796_2289017_-\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP050177.1\|WP_167026707.1\|2285471_2286635_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_CP050177.1\|WP_167026716.1\|2289031_2290132_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP050177.1\|WP_167026684.1\|2278008_2278548_-\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|367590
NZ_CP050177.1\|WP_167026704.1\|2283944_2284616_+\|DUF4097-domain-containing-protein	unknown	unknown	gnl\|CDD\|372574
NZ_CP050177.1\|WP_167026710.1\|2287090_2287729_-\|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|225415
NZ_CP050177.1\|WP_167026688.1\|2279098_2279884_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378924
NZ_CP050177.1\|WP_167036482.1\|2278700_2279030_+\|DUF427-domain-containing-protein	unknown	unknown	gnl\|CDD\|377265
NZ_CP050177.1\|WP_167026737.1\|2297568_2298705_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP050177.1\|WP_167026695.1\|2280978_2282112_-\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_CP050177.1\|WP_167026728.1\|2294556_2295342_-\|enhanced-serine-sensitivity-protein-SseB	unknown	unknown	gnl\|CDD\|379654
NZ_CP050177.1\|WP_167026701.1\|2282919_2283708_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225382
NZ_CP050177.1\|WP_167026722.1\|2291243_2293022_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173871
NZ_CP050177.1\|WP_167026719.1\|2290128_2291127_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP050177.1\|WP_167026734.1\|2296344_2297106_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379324
NZ_CP050177.1\|WP_167036485.1\|2284678_2285431_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP050177.1\|WP_167026698.1\|2282173_2282923_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|376556
NZ_CP050177.1\|WP_167026725.1\|2293086_2294088_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP050177.1\|WP_167026731.1\|2295569_2296304_-\|enhanced-serine-sensitivity-protein-SseB	unknown	unknown	gnl\|CDD\|379654
NZ_CP050177.1\|WP_167026692.1\|2279925_2280858_-\|acetamidase	unknown	unknown	gnl\|CDD\|225279

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167026713.1\|2287796_2289017_-\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	2.08554e-150
NZ_CP050177.1\|WP_167026707.1\|2285471_2286635_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	1.60586e-163
NZ_CP050177.1\|WP_167026716.1\|2289031_2290132_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.3312e-178
NZ_CP050177.1\|WP_167026684.1\|2278008_2278548_-\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|367590	pfam03641, Lysine_decarbox, Possible lysine decarboxylase. The members of this family share a highly conserved motif PGGXGTXXE that is probably functionally important. This family includes proteins annotated as lysine decarboxylases, although the evidence for this is not clear.	8.19847e-35
NZ_CP050177.1\|WP_167026704.1\|2283944_2284616_+\|DUF4097-domain-containing-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	9.33579e-06
NZ_CP050177.1\|WP_167026710.1\|2287090_2287729_-\|trimeric-intracellular-cation-channel-family-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	1.14695e-52
NZ_CP050177.1\|WP_167026688.1\|2279098_2279884_+\|alpha/beta-hydrolase	gnl\|CDD\|378924	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family. This family contains alpha/beta hydrolase enzymes of diverse specificity.	7.07945e-08
NZ_CP050177.1\|WP_167036482.1\|2278700_2279030_+\|DUF427-domain-containing-protein	gnl\|CDD\|377265	pfam04248, NTP_transf_9, Domain of unknown function (DUF427). This domain contains a beta-tent fold.	6.70738e-45
NZ_CP050177.1\|WP_167026737.1\|2297568_2298705_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP050177.1\|WP_167026695.1\|2280978_2282112_-\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_CP050177.1\|WP_167026728.1\|2294556_2295342_-\|enhanced-serine-sensitivity-protein-SseB	gnl\|CDD\|379654	pfam14581, SseB_C, SseB protein C-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This presumed domain is found at the C-terminus of SseB proteins.	1.35391e-23
NZ_CP050177.1\|WP_167026701.1\|2282919_2283708_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.8762e-10
NZ_CP050177.1\|WP_167026722.1\|2291243_2293022_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173871	cd08506, PBP2_clavulanate_OppA2, The substrate-binding domain of an oligopeptide binding protein (OppA2) from the biosynthesis pathway of the beta-lactamase inhibitor clavulanic acid contains the type 2 periplasmic binding fold. Clavulanic acid (CA), a clinically important beta-lactamase inhibitor, is one of a family of clavams produced as secondary metabolites by fermentation of Streptomyces clavuligeru. The biosynthesis of CA proceeds via multiple steps from the precursors, glyceraldehyde-3-phosphate and arginine. CA possesses a characteristic (3R,5R) stereochemistry essential for reaction with penicillin-binding proteins and beta-lactamases. Two genes (oppA1 and oppA2) in the clavulanic acid gene cluster encode oligopeptide-binding proteins that are required for CA biosynthesis. OppA1/2 is involved in the binding and transport of peptides across the cell membrane of Streptomyces clavuligerus. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.35031e-175
NZ_CP050177.1\|WP_167026719.1\|2290128_2291127_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.39171e-96
NZ_CP050177.1\|WP_167026734.1\|2296344_2297106_-\|ATP-binding-protein	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	3.96161e-07
NZ_CP050177.1\|WP_167036485.1\|2284678_2285431_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.97076e-16
NZ_CP050177.1\|WP_167026698.1\|2282173_2282923_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|376556	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase. This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The structure is known for the bacteriophage T7 structure and shows that two of the conserved histidines are zinc binding.	3.31728e-36
NZ_CP050177.1\|WP_167026725.1\|2293086_2294088_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.15719e-98
NZ_CP050177.1\|WP_167026731.1\|2295569_2296304_-\|enhanced-serine-sensitivity-protein-SseB	gnl\|CDD\|379654	pfam14581, SseB_C, SseB protein C-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This presumed domain is found at the C-terminus of SseB proteins.	1.96913e-32
NZ_CP050177.1\|WP_167026692.1\|2279925_2280858_-\|acetamidase	gnl\|CDD\|225279	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion].	1.45637e-63

>NZ_CP050177.1|WP_167026707.1|2285471_2286635_-|cysteine-desulfurase
MAYLDHAATTPMLPEAIEAMTAQLGLAGNASSLHAPGRRARRTVEEAREALAEALGARPSEVVFTSGGTEADNLAVKGLYWSRRDADPARTRVLASPVEHHAVLDAVDWLGAHEGANVEYLPVDPYGRVHPGTLREAIARNPDDVALATVMWANNEIGTLTHVPELAEVAAEFGIPLHSDAVQAFGQAEVDFGASGLAAMTVSGHKIGGPYGIGALLLGREYTPVPVLHGGGQERHVRSGTLDVPAVAAFAVAGRLAAEGRAAFAREIGGLRDELVDAVRKSVPDAVLGGDPVDRLPANAHFSFPGCEGDSLLLLLDAQGIACSTGSACTAGVAQPSHVLLATGCDPDLARGTLRFSLGHTSTREDVDALAAAIGPAVDRARNAGLS
>NZ_CP050177.1|WP_167036485.1|2284678_2285431_+|alpha/beta-hydrolase
MVAIDDTALAVTDTGGAGQAVVYLNGSYADQSHWRRVIAELGGGYRHITYDERARGKSERATDYSFEACLRDLDAVLTARGVERPILVGWSYGAMIAMHWASRHPERTRAAVSVDGALPHEWLDDAAREQIRKLFRRLSPLFPVARPLGLAARMSAERHAEINIEINELCAPAVLDPVLDGITVPARYVLASGGNLGGEAELMERIRADLGPVLTRNPNIQVSAKVASNHSKILRKDFRAVADAVRDLAR
>NZ_CP050177.1|WP_167026704.1|2283944_2284616_+|DUF4097-domain-containing-protein
MQKFTTPAPVSAVLDLPAGRVRFIAADRADTTVEILPADPSKSRDVKAAERISVAYGDGVLRIEAAPAETRSLRDPGAVEVTVQLPAGSRVEAKAASAEFRGVGQLGDVTFEGAHGSVKLDETAAARLTLLAGDIAVGRLGGPAEISTQKGDIRITEALRGTLELRTEAGDVTVGTPRGVSGSLDARTAYGRIHNALRNTEGADAAVHIHATTSYGDITARGL
>NZ_CP050177.1|WP_167026701.1|2282919_2283708_-|helix-turn-helix-domain-containing-protein
MPGGRLTHEERRGIAQGLADGLAYAEIARRLDRPTSTVTREVMRNGGPTAYRADLAHRATEHRAHRRPRTASPRVGAPPQGQGRDDEVVRAYEEVFTTVLMASGAPRMMSRVLACLTLTDAGSLTASELVQRLQVSPASVSKAVAFLEEQGLIRRERDERRRERYVVDDDVWYQSMMASARSTAQIVGTARDGVAVLGAGTGAGVRLENIARFLDFVAESITRAAEQAREILHSKADTDQDDQDDQDDQDDQGDEDARRANP
>NZ_CP050177.1|WP_167026698.1|2282173_2282923_+|N-acetylmuramoyl-L-alanine-amidase
MGEKKGSRRADRAGRGDGGRLGRRAVLLGGAAAVVGGGVLARDRLAPYWWRVPGIEKPRKEGELDYAAAEWVAASSANWRRADRPDDYTVDRVVIHVVQGSYATALKVFRDPGHAAAAHYVVRKDGHVAQMIRELDVGFHAGNRTYNERSIGIEHEGFVDDKRSFTTAMYRSSARLTAGICARYGIPVDRTHIMGHVEVPGTDHTDPGPHWDWARYLKLVREARDHPEPVPAPSPTPSSTPSTAKPREA
>NZ_CP050177.1|WP_167026695.1|2280978_2282112_-|tRNA-2-thiouridine(34)-synthase-MnmA
MTQTTQRPLRVLAAMSGGVDSAVAAARAAEAGHDVTGVHLALSANPQSFRTGARGCCTIEDSRDARRAADVIGIPFYVWDLAERFREDVVDDFVAEYEAGRTPNPCLRCNEKIKFAALLDKALALGFDAVCTGHYATVVTGPDGARELHRASDMAKDQSYVLGVLDERQLAHAMFPLGDTLTTKDEIRAEAERRGLAVAKKPDSHDICFIADGDTQGFLAKRLGKAEGDIVDESGARIGSHEGAFGFTIGQRKGLRIGHPAADGKPRYVLDISPVDNTVTVGPAAALDVTALTAIKPRWCGGTAPEGRGTYTAQLRAHGDETPVEAELSDGTLRVTFDAPVRGVAPGQAIVLYDGTRVVGSATIATTERRRTDALAG
>NZ_CP050177.1|WP_167026692.1|2279925_2280858_-|acetamidase
MAEHRLESVPGTVTHVFSRDLPPVLTVDPGDTVVVHSLDASGHLERQRTPGEPRPRMFPGRPGHCLVGPIAVRGARPGTALAVRVESLRPDPWGWTVSAAADTPLNRRLGLTDTDPSWLLWELDADAGTGTNQYGHTVSLAPFLGVIGLPPAEPGEHPTVPPRVAGGGNIDCRELVAGSTLYLPVTVDDALLCVGDGHAAQGDGEVSGTAVECGMTTRLTLDVETAPPVPTVHAVTPAGRITFGFDADLNEASAQALDAMLTWMGSLFGLDRATALALASATVDLRVTQVANQVWGVHALLPTGAVGTDR
>NZ_CP050177.1|WP_167026688.1|2279098_2279884_+|alpha/beta-hydrolase
MNIACKAKSGDGTLIAYRRTGGGPPLILVSGTLGTAETETRLAELLAPRFEVFVYDRRGRGASGDTGPYEVRREIEDLASLLAEAGGSASVYGVSAGAILVLEAAAAGLPITQFALYEPPYPTDPSVLPDRTAFTERLTSLLAQGRRDGAVELFLSMVGTPRDLIAGMRRSPLWPGLTALAHTLAYDNALVGLEPVPQERLAAIGTRGMVVDGGASTRALRTAAKAVATALPRGRHRTLTGQTHEVAPHVLAPVLTEFFTA
>NZ_CP050177.1|WP_167036482.1|2278700_2279030_+|DUF427-domain-containing-protein
MAAGHTITIEQGTTHVRVIRDGQVVAESRRPLLLRETGLPVRYYIPPQDVRTELLTPSDTSTHCPWKGDASYWSLPDAPDLVWGYEEPKAEVAQIKGHFCFYDTEVLAV
>NZ_CP050177.1|WP_167026684.1|2278008_2278548_-|TIGR00730-family-Rossman-fold-protein
MNICVFLSAADLDERYIRPAREFAELIGKGGHTLVWGGSDTGLMGVVADGVARAGGRLVGVSVEFLAGSARADADEMVFARDLPERKALLLDKADAVVIMVGGAGTLDEATEIIELKKHGLHTKPVVLLNTAGFYDGLKQQLQRMEADGFLPLPLLDLVFFAEDGVGALAYLEESLGVR
>NZ_CP050177.1|WP_167026710.1|2287090_2287729_-|trimeric-intracellular-cation-channel-family-protein
MLHDLFTPSVQHALDLAGIFVFAISGALLAVRKNFDVFGMAVLAEVTALGGGLLRDVVIGAVPPAAFTDLGYFSTPLVATALVFFLHPQVERIQGAVNVFDAAGLGLFCVTGTTKAYDHGLGLTASAALGLATAVGGGVLRDVLANEVPSLLRWDRDLYAVPAIVGAGVVAVCIRFDALNGVTSGVAVVTAFALRLLAMRFHWRAPRAWNRH
>NZ_CP050177.1|WP_167026713.1|2287796_2289017_-|dipeptide-ABC-transporter-ATP-binding-protein
MTIPAQSAGSGVLSKDPAPGETLLKVTGLQKHFPIRKGLLQRQVGSVKAVDGIDFDVRAGETLGVVGESGCGKSTMGRLITRLLEPTGGQVEFQGRDISHLGVRGMRPMRRDVQMIFQDPYSSLNPRHTIGTIVSAPFKLQGVNPEGGVKQKVQSLLELVGLSPEHYNRYPHEFSGGQRQRIGIARALALNPKLVVADEPVSALDVSIQAQVVNLLDDLQDELGLTYVIIAHDLSVIRHVSDRIAVMYLGKIVELADRESLYSAPMHPYTNALMSAVPVPDPRRRGVKSDRILLKGDVPSPISPPTGCRFHTRCWKATEICKTVDPPMQMLKPGQQVACHHPENAPDQAPQDTVLLSAARDAIELVDVTPKAAAEPEVSAVASEDVASSADPEVEAASEKPDASKE
>NZ_CP050177.1|WP_167026716.1|2289031_2290132_-|ABC-transporter-ATP-binding-protein
MTDLSKTGSAPGEPVATGSRPSEAFLDVRDLRVHFPTDDGIVKSVDGLSFQLEKGKTLGIVGESGSGKSVTSMGIMGLHTTGQYGKRKAQVSGEIWLNGEELLSASPDRVRKLRGRDMAMIFQDPLSALHPYYTIGKQIIEAYQVHHNVDKKAARRRAIEMLDRVGIPQPDKRVDSYPHEFSGGMRQRAMIAMSLVNNPDLLIADEPTTALDVTVQAQILDLIRDLQKEFGSAVIIITHDLGVVAELADDILVMYGGRCIERGPAEQVFYQPRHPYTWGLLGSMPRIDREQTERLIPVKGSPPSLINMPTGCAFNPRCPYADVPKGNITRTTRPELTQVESGHWAACHMSEQDRDRIWTEEIAPKL
>NZ_CP050177.1|WP_167026719.1|2290128_2291127_-|ABC-transporter-permease
MLAYLIRRLMAVAVMLVVIMLVVFCIFFLVPKWAGVDPATMYVGKVSDAAAVEAVRQKLQLGDPIFVQLWEFFKGIFVGRTYSSGGDVTKCAAPCFGYSFRTEQAIWPQLTSALPVTLALALGAAVLWLVFGLAAGVLSALKRGSFWDRGAMIVALSGVSLPIYFTGLLSLAVFHYSLGWLDAKYVPLDQSFTGWFGGMILPWVTLAFLYAAMYARITRATMLEVMGEDYIRTARAKGLTEPVVIGKHAMRSTMTPILTLLGMDLGALIGGAILTETTFSLPGLGQAVLEGIKTGDLPVILGVTLITSVAVILANLLVDILYAVIDPRVRLA
>NZ_CP050177.1|WP_167026722.1|2291243_2293022_-|ABC-transporter-substrate-binding-protein
MTSLRTRGRRKQVIAAAFVTAALLGTAACGGGNTKDEGGKSGAAGFDAANNKVANASDKKGGELKFASVQDTDSWDTTRAYYGVVWNFMRYYSRQLVTNKAEAGKPGAEVTPDLATGLAKVSPDGKTYSYTLRDGITWEDGKAITSEDVKYGIERQWAQDVLPGGPVYLRDVLDPDGKYKGPYKDTSKDGLKAIETPDPKTIVFHLPKPNSDFQEMLALTSSSPVRKDKDTKSKYGLHPFSSGPYKFQSYTPNKGTVLVRNTAWKQSSDPIRKALPDKISITIFSNPDEMDNRLLAGEYDLDFSQTGLGVQARIKALKEDKGNLDNPVSGYIRYAAFPQSVKPFDNIHCRKAVIYGADHKSLQTARGGPLAGGDIGTNMLPPSIPGAEGQKYDPYGVLANDGAANIAKAKEELKACGQPNGFKTTIAVRNNKPVEVASAQSLQASLKKIGITTELDQYDGAQTSGIIGNPTIVKNKNYGIIIMGWGPDFPSVQGYGVPLWDSKFILPSGNNNFALIKDPKIDANFDKFTTELDPAKKVSIATEINHQVSEGAYYLPFTFEKFINWRSTRLTNVYTTDGYAGNYDFVNLGVVK
>NZ_CP050177.1|WP_167026725.1|2293086_2294088_-|ABC-transporter-permease
MTAPLHEPTTETAPSATEEVAAVAGKSVQGRSLSRIAWGRLKRDKLALAGGTVVLLLILVAILAPLITHLAGQSPDDYHEDLIDPLFSTPTGSLGGISADHWFGVEPVNGRDIFARIVYGAQVSLLVGFLSAVVAVVFGTVLGVLAGYFGGWFDSLISRVMDMLLSFPQLLFIIALVSVMPNDMLGLSGSGVRILVMILVIGFFGWPYVGRVVRGQTLSLREREYVEAARSLGAGQTYILFKELLPNIVAPIIVYTTMMIPTNILTEAALSFLGVGVKPPTASWGQMLSSAVSYYDADPMYMIIPGLAIFITVLSFNLLGDGVRDALDPKGSR
>NZ_CP050177.1|WP_167026728.1|2294556_2295342_-|enhanced-serine-sensitivity-protein-SseB
MSASGTAAAGRAEQLLRQVTPGRYDAYEALLQALAEDRVWMLLWQGSAGSPDAQYGNMQVEGLGYAPCVTSAQELAVSGWTRTHEVVTGRDIARVLYPDRWGIWLNPHAPGGGVGIPWLDLRRIATGLDRMPAGPLRLSEPAIEIPQFYAQLTQNAHRTPAVRALRRAWVQPALGAPYLAIGLDLYDTSPGSVDSVRTMMRQSVGAVPDGLPVSTVAMSDEYDPVTMWLRANTRPFYDREAHASPAPATGYGYPPPASRAY
>NZ_CP050177.1|WP_167026731.1|2295569_2296304_-|enhanced-serine-sensitivity-protein-SseB
MNTAWPGNELEEVLAASLGNDAAGGRLVEVLGRSQVWVPLPQGGGPDSQSLDLPTMDIEGAPYVPVFSSEEQFMGCVGAHMPFTVAPAREFARGLPPQLGIVVNPGGAVGMPLPPLAVAELCRVGRTPLDGPASGGRVRLFQPDWQEDPVDFLAAAAAEFEASGVVVSARRALASVEGEPPVLFVGVQLASWEAQDRNAPMDALGRALGRVQVPWPVNLVLLDMTQDPVGAWMLARVRPFYQRG
>NZ_CP050177.1|WP_167026734.1|2296344_2297106_-|ATP-binding-protein
MTSQGSGAYVTSTGTAAAGMAGPGGAKPGAAALSGAALSGTGVPVQPAAAAARDLPVRPAPVVRDLRGRDGRVPATLFFAAGDVVVVSGLPGSGKSTLIRRTAAGGGIDSQDARDRWARRLPRRLPYAVYRPLVRVAHYTGLWRALRSGESVVVHDCGTQTWVRRWLARDARRRGRGLHLVLLDVTPDVARAGQRERGRGVSGYAFARHRRAVGHLIGDAESGRLPRGCASATLLDRPAAGTLSAIAFTAATA
>NZ_CP050177.1|WP_167026737.1|2297568_2298705_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MNSAPSSTPRLTALDAVHRALGATMTDFAGWDMPLRYGSERDEHLAVRTRAGLFDLSHMGEITVTGPKAADLLDHALVGNIGAVAVGRARYTMICQEDGGILDDLIVYRLGEDEYMIVANASNAQTVLDALTTRASGFDAEVRDDRDAYALLAVQGPESPGILRSLTDADLDGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVDPAHAEALWQALTEAGAAVGLVPCGLSCRDTLRLEAGMPLYGNELSTALTPFDAGLGRVVKFDKTSNGGDFVGRKALEAAAERAAAAPPRKLVGLVAEGRRVPRAGYAVVAGGQVVGEVTSGAPSPTLGKPIAIAYVDASLAEPGTAGVGVDIRGSHEPYEVVALPFYKRQK

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Crispr_ID: NZ_CP050177_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_10

2362321-2362438

Orphan

Consensus_repeat	Method
TTGAGGACAACGCAAGGCCGCAGGCCGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_10

>merge|NZ_CP050177|10|2362321-2362438|CRISPRCasFinder
TTGAGGACAACGCAAGGCCGCAGGCCGAGCACCCCACCGGCCCCCGCACATCCCCACCACGGGACGCCCCATCCAGCCCGTCCGGCGCTTGAGGACACCGCAAGGCCGCAGGCCGAGC

>NZ_CP050177|10|7|2362321-2362438|CRISPRCasFinder
TTGAGGACAACGCAAGGCCGCAGGCCGAGC	ACCCCACCGGCCCCCGCACATCCCCACCACGGGACGCCCCATCCAGCCCGTCCGGCGC
TTGAGGACACCGCAAGGCCGCAGGCCGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167026863.1\|2373950_2374583_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP050177.1\|WP_167036506.1\|2346406_2346907_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026860.1\|2371956_2372967_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381313
NZ_CP050177.1\|WP_167026842.1\|2351441_2352059_+\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|223340
NZ_CP050177.1\|WP_167036517.1\|2365134_2367171_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP050177.1\|WP_167026846.1\|2353595_2356301_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340852
NZ_CP050177.1\|WP_167026838.1\|2346959_2348483_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271323
NZ_CP050177.1\|WP_167026854.1\|2369952_2370285_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP050177.1\|WP_167026848.1\|2358746_2360471_+\|maltose-alpha-D-glucosyltransferase	unknown	unknown	gnl\|CDD\|274140
NZ_CP050177.1\|WP_167026856.1\|2370281_2370734_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133388
NZ_CP050177.1\|WP_167026844.1\|2352142_2353384_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377511
NZ_CP050177.1\|WP_167026852.1\|2367406_2369806_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226482
NZ_CP050177.1\|WP_167026858.1\|2370838_2371786_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375319
NZ_CP050177.1\|WP_167026840.1\|2349295_2351329_+\|peptidase-M4	unknown	unknown	gnl\|CDD\|341060
NZ_CP050177.1\|WP_167026836.1\|2345273_2346368_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167036509.1\|2356761_2358750_+\|alpha-1,4-glucan--maltose-1-phosphate-maltosyltransferase	unknown	unknown	gnl\|CDD\|200482
NZ_CP050177.1\|WP_167026861.1\|2373005_2373860_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP050177.1\|WP_167026850.1\|2360672_2362157_+\|maltokinase	unknown	unknown	gnl\|CDD\|237794
NZ_CP050177.1\|WP_167026865.1\|2374702_2375188_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP050177.1\|WP_167036513.1\|2362640_2364917_+\|1,4-alpha-glucan-branching-enzyme	unknown	unknown	gnl\|CDD\|235445

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167026863.1\|2373950_2374583_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.23717e-16
NZ_CP050177.1\|WP_167026858.1\|2370838_2371786_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	7.07489e-64
NZ_CP050177.1\|WP_167026860.1\|2371956_2372967_+\|aldo/keto-reductase	gnl\|CDD\|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	9.26508e-138
NZ_CP050177.1\|WP_167026842.1\|2351441_2352059_+\|dihydrofolate-reductase	gnl\|CDD\|223340	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism].	4.45474e-11
NZ_CP050177.1\|WP_167026846.1\|2353595_2356301_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340852	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase. This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism.	0
NZ_CP050177.1\|WP_167026838.1\|2346959_2348483_-\|hypothetical-protein	gnl\|CDD\|271323	cd14953, NHL_like_1, Uncharacterized NHL-repeat domain in bacterial proteins. This bacterial family of NHL-repeat domains is found in a variety of domain architectures. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	9.5325e-152
NZ_CP050177.1\|WP_167026854.1\|2369952_2370285_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	1.43268e-35
NZ_CP050177.1\|WP_167026848.1\|2358746_2360471_+\|maltose-alpha-D-glucosyltransferase	gnl\|CDD\|274140	TIGR02456, Trehalose_synthase, trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP050177.1\|WP_167026856.1\|2370281_2370734_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133388	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily. Putative helix-turn-helix (HTH) MerR-like transcription regulators (subgroup 3). Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	3.81369e-42
NZ_CP050177.1\|WP_167026844.1\|2352142_2353384_-\|hypothetical-protein	gnl\|CDD\|377511	pfam05426, Alginate_lyase, Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.	1.35046e-05
NZ_CP050177.1\|WP_167026852.1\|2367406_2369806_-\|AAA-family-ATPase	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	6.02108e-92
NZ_CP050177.1\|WP_167026840.1\|2349295_2351329_+\|peptidase-M4	gnl\|CDD\|341060	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease. This peptidase M4 family includes several endopeptidases such as thermolysin (EC 3.4.24.27), aureolysin (the extracellular metalloproteinase from Staphylococcus aureus), neutral protease from Bacillus cereus, protealysin, and bacillolysin (EC 3.4.24.28). Typically, the M4 peptidases consist of a presequence (signal sequence), a propeptide sequence, and a peptidase unit. The presequence is cleaved off during export while the propeptide has inhibitory and chaperone functions and facilitates folding. The propeptide remains attached until the peptidase is secreted and can be safely activated. All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The active site is found between two sub-domains; the N-terminal domain contains the HEXXH zinc-binding motif while the helical C-terminal domain, which is unique for the family, carries the third zinc ligand. These peptidases are secreted eubacterial endopeptidases from Gram-positive or Gram-negative sources that degrade extracellular proteins and peptides for bacterial nutrition. They are selectively inhibited by Steptomyces metalloproteinase inhibitor (SMPI) as well as by phosphoramidon from Streptomyces tanashiensis. A large number of these enzymes are implicated as key factors in the pathogenesis of various diseases, including gastritis, peptic ulcer, gastric carcinoma, cholera and several types of bacterial infections, and are therefore important drug targets. Some enzymes of the family can function at extremes of temperatures, while some function in organic solvents, thus rendering them novel targets for biotechnological applications. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing. It has also been used in production of the artificial sweetener aspartame.	8.83066e-108
NZ_CP050177.1\|WP_167036517.1\|2365134_2367171_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	2.14343e-53
NZ_CP050177.1\|WP_167036509.1\|2356761_2358750_+\|alpha-1,4-glucan--maltose-1-phosphate-maltosyltransferase	gnl\|CDD\|200482	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins. GlgE is a (1,4)-a-D-glucan:phosphate a-D-maltosyltransferase, involved in a-glucan biosynthesis in bacteria. It is also an anti-tuberculosis drug target. GlgE isoform I from Streptomyces coelicolor has the same catalytic and very similar kinetic properties to GlgE from Mycobacterium tuberculosis. GlgE from Streptomyces coelicolor forms a homodimer with each subunit comprising five domains (A, B, C, N, and S) and 2 inserts. Domain A is a catalytic alpha-amylase-type domain that along with domain N, which has a beta-sandwich fold and forms the core of the dimer interface, binds cyclodextrins. Domain A, B, and the 2 inserts define a well conserved donor pocket that binds maltose. Cyclodextrins competitively inhibit the binding of maltooligosaccharides to the S. coelicolor enzyme, indicating that the hydrophobic patch overlaps with the acceptor binding site. This is not the case in M. tuberculosis GlgE because cyclodextrins do not inhibit this enzyme, despite acceptor length specificity being conserved. Domain C is hypothesized to help stabilize domain A and could be involved in substrate binding. Domain S is a helix bundle that is inserted within the N domain and it plays a role in the dimer interface and interacts directly with domain B. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP050177.1\|WP_167026861.1\|2373005_2373860_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.787e-16
NZ_CP050177.1\|WP_167026850.1\|2360672_2362157_+\|maltokinase	gnl\|CDD\|237794	PRK14705, PRK14705, glycogen branching enzyme; Provisional.	4.06213e-70
NZ_CP050177.1\|WP_167026865.1\|2374702_2375188_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.74153e-17
NZ_CP050177.1\|WP_167036513.1\|2362640_2364917_+\|1,4-alpha-glucan-branching-enzyme	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0

>NZ_CP050177.1|WP_167026850.1|2360672_2362157_+|maltokinase
MTKAASTRITPYGAPDRAVSANDAAALLGSLAPLLHDWLPRQRWFAGKGRAVTGFVPVTVTELRPTHAGDPALLHLLVRVEQGAAGVSASAGDCYQLLLGVREALPPHLASARLGRATQGPLAGLTVYEGLHDPSLAELLLERLRNAGSWGPLRFGRARPIPAGLTGKLLDAEQSNSSLVYGDAVHGNAAHGDAERGDAERGDAYILKILRRVFPGPHPDLELPLALAAEGCDRVPAPVAWFEADDPTGGDETLTLGVLQPYLRGSRDGWQLALAALGADREFTSEARSLGRATAEVHLALASALPTVTLGRRQTGQLAHGMLGRLDTAAQAVPALIPYVPGLRAAFDALAGLDEAARGRPAQRVHGDLHLGQALRTPDGRWSVIDFEGEPAIPLAERRRPQPPVRDVAGMLRSFDYAARSHEPWRADWATRCRAAFCEGYAQASGTDPRSEPELLRAYETDKAVYEVLYEARHRPAWLPVPMAAIRRLAGEHQ
>NZ_CP050177.1|WP_167026848.1|2358746_2360471_+|maltose-alpha-D-glucosyltransferase
MIVNEPVHDTFEDTPAQDRHPDWFKRAVFYEVLVRSFQDSNGDGIGDLKGITAKLDYLQWLGVDCLWLPPFFKSPLRDGGYDVSDYTAVLPEFGDLADFVEFVDATHQRGMRVVIDFVMNHTSDQHEWFQESRRDPDGPYGDYYVWADDDKQYQDARIIFVDTETSNWTFDPVRKQYYWHRFFSHQPDLNYENPAVQEEIISALRFWLDLGIDGFRLDAVPYLYQKEGTNCENLPATHAFLKRVRKEIDAHYPDTVLLAEANQWPEDVVDYFGDYAKGGDECHMAFHFPVMPRIFMAVRRESRYPVSEILAKTPAIPENCQWGIFLRNHDELTLEMVTDEERDYMYAEYAKDPRMRANIGIRRRLAPLLDNDRNQIELFTALLLSLPGSPILYYGDEIGMGDNIWLGDRDAVRTPMQWTPDRNAGFSSSDPGRLYLPTIMDPVYGYQVTNVEASMASPSSLLHWTRRMIEIRKQNPAFGLGSYTELSSSNPAVLAFLREAPSPDGKGDDLVLCVHNFSRFAQPTELDLKEFNGRHPVELIGGVRFPAIGELPYLLTLAGHGFYWFRLRKDVASS
>NZ_CP050177.1|WP_167036509.1|2356761_2358750_+|alpha-1,4-glucan--maltose-1-phosphate-maltosyltransferase
MIGRIPVLDVHPLVDCGKRPAKAVSGETFQVTATVFREGHDAVAANVVLTDPSGRPGPWTPMHELAPGTDRWGAEVTPTEEGRWTYTVEAWSDPVATWRHTAGIKIPAGIDTELVLAEGAALYERAAVGVPKKDGREAVLAAVDALRDRDRPAGARLAAALSQDATAALGRHPLRELVSSSRPLRLLVERRRALFGSWYELFPRSEGAVVKEGEPPVSGTFRTAAERLPAVAAMGFDVVYLPPVHPIGTTHRKGPNNTLTPGPEDVGVPWAIGSSEGGHDAIHPDLGTIEDFDHFVETARTLRMEVALDFALQCSPDHPWVAKKPEWFHHRADGSIAYAENPPKKYQDIYPIAFDSDMRGLVRETVRVLRYWMSHGVRIFRVDNPHTKPVLFWEKVIGNINRTDPDVVFLAEAFTRPAMMRTLAAVGFQQSYTYFTWRNSKRELTEYLTELSRETAAYMRPNFFVNTPDILHAYLQEGGRPAFEVRAVLAATMVPSWGVYAGYELCENTPAKPGSEEYLDSEKYQLRPRDWEAAEREGRTIAPLITTLNRIRRRHPALQQLRDIHFHEADNEAVIAYSKRAGSNIVLVVVNLDPHHTQEATVSLDMERLGLEWHETVPVRDELTGETYHWGRANYVRLEPGVTPAHVVVLRPSPPIGGSPTS
>NZ_CP050177.1|WP_167026846.1|2353595_2356301_-|glycosyltransferase-family-1-protein
MKAIRRFTVRPVLPDPLRPLGDLARNLRWSWHTETRELFESVDPAGWRAADGDPVRFLGGVSAARLAELAEDRTFLHTLNTAAADLDAYLHSPRWYQESDGGGGELPAAIGYFSPEFGVTAALPQYSGGLGILAGDHLKAASDLGVPLIGVGLLYRHGYFRQSLSRDGWQQERYPVLDPNELPLTLLREEDGSPALVTLTLPGRRTLHACVWQARVGRVPLLMLDSDVEENGPGERDVTDRLYGGGSEHRLLQEMLLGIGGVRAVRTYCRLTGHAAPEVFHTNEGHAGFLGLERIRELAGEGLGFDAALEAVRAGTVFTTHTPVPAGIDRFDRSLVAHHFGDDGELPGVDAERILGLGLETYPGGQPHLFNMAVMGLRLAQRANGVSTLHGAVSREMFSGLWPGFDPEEVPIGSVTNGVHAPTWVAPEVARLGAGQVGTERAEHALSVGGSPRWDSVEDIPDADIWAVRRSLRGQLVEEVRERLRASWLQRGAAEAELGWIDGVLDPDVLTIGFARRVPSYKRLTLMLRDRDRLRAMLLHPERPVQIVVAGKAHPADDGGKRLVQELVRFADDPRVRHRIVFLPDYGMGMAKKLYPGCDVWLNNPLRPLEACGTSGMKAALNGCLNLSVLDGWWDEWFEPDFGWAIPTADGVTADENRRDDLEAGALYELIEDRVAPRFYDRDGREGRDGRNGAGNGGGDGEGLPGRWIEMVRRTLVTLGPKVLASRMVRDYVERLYAPAARAHRALDPATAAELAEWKGRARSLWPRVTVDHVETVPSATAASEKAADGTAELGSTLALRVRVGLGDLRPDEVEVQAVAGRVGSDDTIADAQTFPLKPAGGPDPEGRWVYEGPLALDRTGPYGYTVRVLPAHPLLATSAELGLVALPAEAAGDGAGVLMR
>NZ_CP050177.1|WP_167026844.1|2352142_2353384_-|hypothetical-protein
MRPGPIARVLGLSAALAGLTAAVFMAPASAKTPEEVTAAVAAPAVAAAPAAFTHPGVNLNTAQLDFVRSKVQAGAQPWKAAYDQMVASKYASLSRTAKPRATVECGSFSNPNNGCTDEREDAIAAYTDALIWYITRDDAYAQKAIQLMDAWSATIKDHTNSNAPLQTGWAGSSWPKAAEIIKYVRGNWANSGRFDTMLRNVYLPKLLAGSNSNGNWELTMVEASTSIAVYLNDKSAYDSSISRYLTRVPAYIYLASDGALPKTVPSQNLNTTAKIVNYWQGQSTFGSAMTGLTQETCRDFVHTGYGISSISHVLETARLQGQDLYPQVGERLRQALGFQSRYEIQAQPVPSNLCGGSVVRGLGPITEVGFNTLNTLHGVAMANTQTLTERQRPSGTNNLFVAWETLTNAGNPN
>NZ_CP050177.1|WP_167026842.1|2351441_2352059_+|dihydrofolate-reductase
MTRIIADISVSLDGFVTGPDPGPDNGLGTGGEALHTWAFSDDPEDRRILSEGTARSGAVVLGRHLFDVVDGPQGWDNSVGYGAGEVGRPAFVVVTSAPPASLRTTELDWTFVTTGLPDAVATAREKAEAAAAARGKDLDVVLMGGSATIASALDAGLVDMLVLHLSPVVLGGGTPLFTRAAPRTLVQRGVLATSTATHLTYDVLG
>NZ_CP050177.1|WP_167026840.1|2349295_2351329_+|peptidase-M4
MRPTPSRRATATGALIAAAALLSVGVQAGTATAQPDSAPKAPVAGKADPGALPRDLSPAQRAALIKAADASKADTAKELGLGAQEKLAVRDVVQDADGTTHTRYERTYAGLPVLGGDLVVQETKAGKTESVTKASKAVLKNVDTSADVTPAIAEKQALGLAAADGSKKTEADRAPRKVVWAAQGTPTLAYETVVGGLQHDGTPNELHVVTDATTGKKIFEWQAVENGVGNTQYNGQVTLGSTQSGSTWNLTDAARGNHRTYNLNRGTSGTGTLFSGPDDVWGNGVASNAETAAADAAYGAAETWDYFKNVHGRNGIRGDGVGAYSRVHYGNNYVNAFWQDACFCMTYGDGSGNAKPLTSLDVAAHEMSHGVTANTAGLIYSGESGGLNEATSDIFAAAVEFYSNTAADPGDYLVGEKIDINGNGTPLRYMDKPSKDGASKDAWYSGLGGIDVHYSSGPANHFFYLLSEGSGVKTVNGVTYDSPTSDGLPVTGIGRAKAEQIWFKALSTKFTSSTNYAAARTGTLAVASDLYGGTSSVEYKAVQDAWAAINVGTRSGTPPPDPSKVFESTTQVAIPDNGAAVTSTVNVTGITGNAPTNLQVSVDITHTWRGDLVIDLVAPDGTAYRVKAASSGDSADNVVETYTVNASSEVANGAWKLRVQDVASADTGRINSFKLQF
>NZ_CP050177.1|WP_167026838.1|2346959_2348483_-|hypothetical-protein
MGTPQAAATGSEESAPRINTVAGTGVAGFKGDNEPAVAAQLNRPYGIALDSTGSLYFSDYNNHRVRKISTDGKVSTVAGAGAGYRGDGGPAASALLNCPREVAVDAGGSVYVTDAANHRVRVITPEGKIDTVAGTGVAGFSGDGGPASKAQLNYPLGVAVDSSGALYISDHSNNRVRKVSADGKISTVAGTGVAGYKGDDGPAVSAQLNRPYALAVDDADILYITDGNNHRVRKVASDGTISTVVGKGTAGFSGDGGPATSAQLNLPLGVVVDSAGTLYISDYNNHRVRKVTPDGQIATLAGKGTAGFGGDDGPAAAAQLNYPFGLAVDCVDTLYIADHLNNRIRKIASQRMAGLPESGTVVSWANVRSRLRMGVLRESTKDGAEIHQSLSSPRAHQQWRLIATGQDGGDILYRIENLRSGKVLEVVGGGTADGAVVVQRAYEGNGADHQQWRLIPVGSLADTPRVYEIANHNSGLLLRVETNAPAVVKQYGAQGDHRDRQWQLLPV
>NZ_CP050177.1|WP_167036506.1|2346406_2346907_+|hypothetical-protein
MVFKNVFDSAGTGAGLFSVTTDRDKPRPGAGVDFEDADDDTYDDTTTSLFTSGIHGASHRAKIVQEQAPEARVILGFLASFIQTTQASAGTQAAYAQDPGSVSTAAAAGMEKSSETVTRHSDLQKDEGLQAPKRDDFKAPDAPASPKADQPPKAPKATAEKPSDSK
>NZ_CP050177.1|WP_167026836.1|2345273_2346368_+|hypothetical-protein
MPSNAYNLERAKRQPLTKKNLRELNIEQTWQSILEHPKLVYVDEYGVRHKPVGFSVNKSSFGSFPGTAYQLGWLAYMNLGEPLIEERRNITQPPPDTFSSRTYVNRSGSDMNFTDSVDFNVSNGATWSLSGDTKLTFGGNVSAQLQLQLQNKLGLNLQGQLGTQLKNEMANKNANTMTSKNSKDSVGADNANTVDVSVSNGMTNSASASMTGSVDFTTTGSASGTAGLNAALAQGIAASVGGSLTTSWASKSQISGTVPPNSRVETIVTQRRALKQYTYEIPVTFSGLLAVKYDVPVTVLSPPQPDAYPRRDQLVARDMSDLDLDGGGFRMKGLAEVVSALEVHHTMFDGESLTDSERDLYKKP
>NZ_CP050177.1|WP_167036513.1|2362640_2364917_+|1,4-alpha-glucan-branching-enzyme
MSKRPEQAPTPAKPSPTPSPTPAVPPLHPTDRERLLSGSHHDPHGLLGAHPVNGGDGGIAVRTLRPYAHAVTVVTDDARIPLDDDGDGFFSGVLPLTAVPAYSLLIRYGDADGVDDVEVHDPYRFLPALGDLDLHLIGEGRHEELWKALGARPMTHQGVTGTRFTVWAPNARGVRVSGDFNYWDGTSLPMRSLGATGVWELFVPGIGEGALYKFDITRPDGTHTMRADPMARRTEVPPATASVVTESHHVWQDEEWMAHRGDRAVHEAPFSVYEIHLASWRPGLTYRQLAVQLPAYVKDLGFTHVELMPVAEHPFGGSWGYQVTGFYAPTSRLGTPDDFRFLVDALHRAGIGVIVDWVPAHFPKDEWALARFDGRPLYESEDPQRAEHPDWGTLEFDYGRTEVRNFLVANAVFWCEEFHIDGLRVDAVASMLYLDYSREAGQWSPNEHGGRENLDAVAFLQEMNATVYRRCPGVVTIAEESTAWNGVTRATHLVGPDGFGGLGFGLKWNMGWMHDSLDYVAKEPVHRKYHHGEMTFSMVYAYSENYVLPISHDEVVHGKRALVSKMPGDWWQQRANERAYLGFMWAHPGKQLLFMGQEFAQGAEWSEGHGPDWWLLDPSYEAAPDHQGVRDLVRDLNAVYGATPPLWERDTSPEGFSWVDGGAAEDNVFAFLRYDAAGSPLLAVSHFAPVVRHDYRLGVPEKYAAWTEVLNTDAARYGGSDVLNPEPVKPESTPSHGHPSSLHLTLPPLATIWLRPTP
>NZ_CP050177.1|WP_167036517.1|2365134_2367171_-|SpoIIE-family-protein-phosphatase
MLDPAEQVLRMAFVTGLSRRVATPWIQVALASTVPAAEAAREGRMVWVPSHTDMARRFPRTALALPYPIALGVVPVSSGPTRWGSLLQLWPGTHEPALSERETRALEEGAERIACLLQRAAEAGHPVRSTELRVMDPPPTRHAEAGADLTERLPEGICALDLEGRITFLNGHAVQLLGGTRDGLLGARPWDALPWLNDPVYENAYLGSLFSRLPTSFSARRPPGQWLAFHLYPDATGVSVRVTPGEAPGDGGEGDGVQDPVLTPTAVERTRPGALFQLLHLSSVLTDAVGVRDVTDTVTDHIMPVINAQAMALVTADEGRLKVVGCRGFRRDIAEVFDGLAMSAETPVVRAIQNGTPLFSTDGDELRRTSPSVQLSPDKASFAYLPMFASGRTIGCCVLGYNRPHLFPPDERTALISLAGVIAQALERARLYDSKNQVALGLQAALLPHDLPRIPGLQVAARYLPATRGLDIGGDFYDLIRLDDTSAAAVIGDVQGHNVNAAALMGQVRTAVHTHASAGAPPDEVLARTNRLLIDLRSTLFTSCLYAHLDLRHHRARLATAGHPPPILRRPDGGTEILDVPTGILLGIEPEAEYRTVDVPLPPGAVLALYTDGLVEVPGTSLDTSIAEFAARLGNADPRSLDALSETLVRRAGRTRQSFRGSDDIALLLIKPDARGAG
>NZ_CP050177.1|WP_167026852.1|2367406_2369806_-|AAA-family-ATPase
MDAAYWTGAQLSTEELHGEQQFVTLLYERLDALREQAEDAVEVTAGQSGTGRQARVERDITVAEQSGRVSSLNAVESGLCFGRIDLADHTTHHIGRIGIRRDDEERTPLLIDWRAPVARPFYLATGFEPMGLRRRRHLTTQGRRVTGLHDEIMDLTDTRRTGYEDPDADAVLLAALNSARTGRMADIVQTIQAEQDRVIRAPYRGVLVVEGGPGTGKTAVALHRAAYLLYAHRERLARRAVLIVGPNPAFLGYIGEVLPSLGETGVLLATTGELFPGVRAVGTDSPAAAEVKGRLAMAKVLAEEVADRQSLPRPTLEIRHEDHGTLVLDRETAAEARQRARETGLPHNLARPTFAFRVIDALTAQLAERIGADPEGGPNLLSPADVVQLGKEVATSREVHAAIESLWPTLTPQRLVADFLAAPWRLDARDAAAVRRSGIRTGADAPIDWTPADVPLLDEAAELLGEDNSAAVAAAALERQEQIAYAQGVLELSYGSRTQEFEDEDESEVLAAHDVIDAERFAERHEEADTRSAAERAAADRTWAFGHIVVDEAQELSAMAWRLLMRRCPSRSMTLVGDPAQTGDAAGCDSWQRILEPYVGTRWELSRLGVNYRTPAEIMEVAAEVRRLTDPLFEPPRSVRSTGTAPLVRAVAPGLMARTAAELVAESAGSAAGSAAGSAEGPSAEGRPGEGRLAVIAPPGLVPALGAELPDASWGGAPDLTRPVVVLDPRQAKGLEFDTVVVVDPEGILDGSPRGANDLYVALTRTTQRLAIVRNAEVPSRLKSASGTGAADAEAPDGA
>NZ_CP050177.1|WP_167026854.1|2369952_2370285_-|thioredoxin
MITIEGVDAVTDTDFDAVVRESELPVLVEFTADWCPPCRQLAPVLSAVAAEQAGRLKVVQLDVDTNPGITTRYGVLAMPTLLLFRDGEPVKSMVGARPKRRLMEELADEL
>NZ_CP050177.1|WP_167026856.1|2370281_2370734_-|MerR-family-transcriptional-regulator
MRIGELAERAGTTTRALRYYESRGLLPARRAVNGYRTYDEDDLRLIQQIRTLQDFGFDLEETRPFVECLRAGHPAGDACPASLDVYRRKLTELDGLIDRLRSVRAQVGAQLAQAEAESAGGPEPRCDLTDAFVEGIHRAPIHPTHGGTDA
>NZ_CP050177.1|WP_167026858.1|2370838_2371786_-|helix-turn-helix-domain-containing-protein
MTDIPTSGGAGPGGAGPGGQGAADARPGGSPAGGGNSELREFLRSRRARVTPEDAGLPPHPGTRRVPGLRREEVAQLAGVSVDYYVRLERGRGTNVSESVLDAVARALRLDDTERGHLFALARPTRKLARPLPPQRVRPGMYRILDTLTGTPAQVIGRRLDVLASNAMARALFADFDALPQRERNMARFIFLDDAARELYADWAATARGTVAALHLYAGRNPHDPRLAELIGDLSLGDQDFRRWWADHDVLRRTYGSKRYHHPLVGDLTLDYEALTPTADPDQMLGIYTAEPGSPSAQALSLLASWIQEPAAGHA
>NZ_CP050177.1|WP_167026860.1|2371956_2372967_+|aldo/keto-reductase
MKRGILGGTGMSVSEVALGTMMFGATGNPDHDESVRMIHRALDAGVNLVDTADVYSGGESEEIVGKALKGRRDEVVLATKFGWPAGGDPNRQGGSPRWIVRAVEDSLRRLGTDHIDLYQLHRPDPHTDVEETLGALSELVRSGKVRAIGSSCTPAELIVEAQWAAERRGHHRFRTEQPPYSLLLRGIESGVLPTAQRYGMGVLTYGPLGSGWLSGRADPSKGARAARGPATFDLSVPANRAKAEAVRRLTELAVEAGMPLSHLATAFVRAHPAVTSVLIGPRRPEHLDDLLRGAEAELTDDVLDRIDEIVPPGTNINPDDIYYTPPALADKRLRRA
>NZ_CP050177.1|WP_167026861.1|2373005_2373860_-|class-I-SAM-dependent-methyltransferase
MAHTHQHTPHPDHHEHGGDSGQAEILDLDAEVLAEHTASLIAWLPLRSAPRRIVDLGCGTGAGTFALLARFPDAHVTAVDTSPGHLRSLHEKARALGVEGRVRTVAADLDSDHWPDLGTPDLVWASASMHHMADPGRALRSVRALLAPAGLFAVVELAGFPRFLPADAPESRLEERAHAATDAFHAEHVPHRGADWGPLLTAAGFTVEAERTLRVDIPGGRDAAIGRYAHSSLQRVRAVAAPGLAPEDLAALDTLLDPNSPNSLLRREDLTVRTERAIWAARRA
>NZ_CP050177.1|WP_167026863.1|2373950_2374583_-|helix-turn-helix-transcriptional-regulator
MTQEDAQLDSLVRKRIRALRVAQGWSLEELAGRANLSQSSLSRIENGPRRLALDQLVTLARALDTTLDQLVANAADDVVISPMIDVTHGLMRWPMKGDAGMSVMRQRLTDPPPDNPARMRAHPGREWLVVLSGTAVLMLGHRRFRVDTNQAAEFPTMTPHAIGAEGGPCEIMGIFDRDARRGHQKAAGADGTEADCGGFQGAGDQGPSGG
>NZ_CP050177.1|WP_167026865.1|2374702_2375188_-|MarR-family-transcriptional-regulator
MSQSGPGVDLDTSLGYLLKEASSALRTAMEEVLRPLGMTVTHYSCLELLAQRPGLSNSELARGAFVTRQSMNVLLQTLERDGYVTRPAAAPVGKVLPARLTASGRRSLETASAAVRAVELRMLAGLTEAERSDAFRILRSMARSLRDGADGAGGSGGSGGT

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Crispr_ID: NZ_CP050177_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_11

2427428-2427521

Orphan

Consensus_repeat	Method
GCGCCCCGTGGCCCGCGGCCAACGATCCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_11

>merge|NZ_CP050177|11|2427428-2427521|CRISPRCasFinder
GCGCCCCGTGGCCCGCGGCCAACGATCCCCCGGCCACCGGCCACCGCCCGGCCCGCGCCCCGGGCGCCCCGTGGCCCGCGGCCAACGACCCCCC

>NZ_CP050177|11|8|2427428-2427521|CRISPRCasFinder
GCGCCCCGTGGCCCGCGGCCAACGATCCCCC	GGCCACCGGCCACCGCCCGGCCCGCGCCCCGG
GCGCCCCGTGGCCCGCGGCCAACGACCCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167027005.1\|2433618_2434413_+\|AIM24-family-protein	unknown	unknown	gnl\|CDD\|376704
NZ_CP050177.1\|WP_167027002.1\|2432971_2433622_+\|AIM24-family-protein	unknown	unknown	gnl\|CDD\|376704
NZ_CP050177.1\|WP_167026975.1\|2422001_2422340_-\|DUF3817-domain-containing-protein	unknown	unknown	gnl\|CDD\|378962
NZ_CP050177.1\|WP_161309196.1\|2431525_2431819_-\|MTH1187-family-thiamine-binding-protein	unknown	unknown	gnl\|CDD\|376658
NZ_CP050177.1\|WP_167026963.1\|2417917_2418619_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP050177.1\|WP_167026981.1\|2422928_2424497_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP050177.1\|WP_167027013.1\|2435549_2436044_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236999
NZ_CP050177.1\|WP_167026969.1\|2420025_2420769_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026960.1\|2416706_2417921_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NZ_CP050177.1\|WP_167026996.1\|2431815_2432169_-\|DUF3817-domain-containing-protein	unknown	unknown	gnl\|CDD\|378962
NZ_CP050177.1\|WP_167026966.1\|2418618_2419998_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|273776
NZ_CP050177.1\|WP_167027008.1\|2434549_2435026_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP050177.1\|WP_167026993.1\|2429553_2431383_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133043
NZ_CP050177.1\|WP_167026972.1\|2421055_2421481_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026999.1\|2432333_2432972_+\|AIM24-family-protein	unknown	unknown	gnl\|CDD\|376704
NZ_CP050177.1\|WP_167027011.1\|2435098_2435476_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167026990.1\|2427592_2429557_-\|DUF1929-domain-containing-protein	unknown	unknown	gnl\|CDD\|199882
NZ_CP050177.1\|WP_167026987.1\|2425709_2426780_+\|glycoside-hydrolase-family-6-protein	unknown	unknown	gnl\|CDD\|376532
NZ_CP050177.1\|WP_167026983.1\|2424593_2425637_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238042
NZ_CP050177.1\|WP_167026978.1\|2422408_2422918_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167027005.1\|2433618_2434413_+\|AIM24-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	4.76562e-07
NZ_CP050177.1\|WP_167027002.1\|2432971_2433622_+\|AIM24-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	9.07536e-42
NZ_CP050177.1\|WP_167026975.1\|2422001_2422340_-\|DUF3817-domain-containing-protein	gnl\|CDD\|378962	pfam12823, DUF3817, Domain of unknown function (DUF3817). This domain is of unknown function. It is sometimes found adjacent to pfam07690 and pfam03176 which are both transporter domains.	1.74003e-27
NZ_CP050177.1\|WP_167026963.1\|2417917_2418619_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	4.02285e-99
NZ_CP050177.1\|WP_161309196.1\|2431525_2431819_-\|MTH1187-family-thiamine-binding-protein	gnl\|CDD\|376658	pfam01910, Thiamine_BP, Thiamine-binding protein. The crystal structure of two of these members shows that this domain has a ferredoxin like fold and is likely to exists as at least homodimers. Sulphate ions are are located at the dimer interfaces, which are thought to confer additional stability. Although the function of this domain remains to be identified, its structure suggests a role in protein-protein interactions possibly regulated by the binding of small-molecule ligands. Solution of the structure of the hyperthermophilic anaerobic Thermotoga maritima sequence, UniProtKB:Q9WYV6, shows that this has a beta-alpha-beta-beta-alpha-beta ferredoxin-like fold and assembles as a homotetramer. It was possible to identify a pocket in each monmer that bound an unidentified ligand. It was also found that it bound charged thiamine though not hydroxymethyl pyrimidine. It is proposed that it is transporting charged thiamine around the cytoplasm. Under oxidative conditions this bacterium is under stress, and the transcriiptional unit within which this protein is expressed is up-regulated in these conditions, suggesting that the chelation of cytoplasmic thaimine is part of the response mechanism to such oxidatvie stress, which is mediated by this family.	1.17987e-29
NZ_CP050177.1\|WP_167026981.1\|2422928_2424497_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.40333e-41
NZ_CP050177.1\|WP_167026983.1\|2424593_2425637_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	2.68356e-08
NZ_CP050177.1\|WP_167026960.1\|2416706_2417921_-\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	2.00188e-28
NZ_CP050177.1\|WP_167026996.1\|2431815_2432169_-\|DUF3817-domain-containing-protein	gnl\|CDD\|378962	pfam12823, DUF3817, Domain of unknown function (DUF3817). This domain is of unknown function. It is sometimes found adjacent to pfam07690 and pfam03176 which are both transporter domains.	4.02509e-26
NZ_CP050177.1\|WP_167026966.1\|2418618_2419998_-\|peptidoglycan-binding-protein	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	0.000176609
NZ_CP050177.1\|WP_167027008.1\|2434549_2435026_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	9.62766e-13
NZ_CP050177.1\|WP_167027013.1\|2435549_2436044_-\|hypothetical-protein	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0.0011068
NZ_CP050177.1\|WP_167026999.1\|2432333_2432972_+\|AIM24-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	2.82655e-37
NZ_CP050177.1\|WP_167026990.1\|2427592_2429557_-\|DUF1929-domain-containing-protein	gnl\|CDD\|199882	cd02851, E_set_GO_C, C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.	2.76851e-27
NZ_CP050177.1\|WP_167026987.1\|2425709_2426780_+\|glycoside-hydrolase-family-6-protein	gnl\|CDD\|376532	pfam01341, Glyco_hydro_6, Glycosyl hydrolases family 6.	2.8626e-85
NZ_CP050177.1\|WP_167026993.1\|2429553_2431383_-\|glycosyltransferase	gnl\|CDD\|133043	cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.	4.02052e-80
NZ_CP050177.1\|WP_167026978.1\|2422408_2422918_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.51442e-24

>NZ_CP050177.1|WP_167026987.1|2425709_2426780_+|glycoside-hydrolase-family-6-protein
MSGRRPRSPFAARSVAPARSPFAARTVLAALALALALGGCASPQGDRGAQRGGSSVGHGEAAPEASPFWVDPDSEAARQVARWERQGRAADARVLRRIADRPVAVWPSGADPVPQIEHAVRGATAEGRTPVLVAYNIPHRDCGLYSAGGAADASAYRTWIHSFATALGRAPAVVILEPDAIAHLADGCTPAEHHEERYTLLAQAVSRLKQQPRTRVYLDAGNPAWISDPARLAGPLQRAGVNAADGFALNVSNFQSNGTVRAFGARLSALLGGSHFTVDTSRNGQGPLPGNRAQAWCNPPGRALGTPPTTRTGDKLVDAYLWIKRPGESDGPCRGGPPAGTWWPDYALGLARRATN
>NZ_CP050177.1|WP_167026983.1|2424593_2425637_+|winged-helix-turn-helix-transcriptional-regulator
MPFHLHFGESDLLRSRFAVSPLWETQEAVRTLARPERHGYHLPWLRRVRGAAAGLDLGPLRLLMPDLGHNPDFLCPAPLSAVASFEEEIEAVRATPAEAARTDIALSLADSPGAAGTPAGRAMLADPAGAVRELADLLEAAWRALVEPEWPRLRALLEADVAYHSRRLADGGFERLIGELSPQLRWGGGATTGGAAGEGATGGGASLTIVGTHGDHERVLGGQGLVLMPSVFCWPRVVSGYEAPWQPALIYPARGIGGLWTEAADRTPDALARLLGRARADVLCALDEPAGTTALAHRLGLAPSSVSAHLSVLRGSGLLTSRRYGHQVLYERTPLGITLAVSQPLPD
>NZ_CP050177.1|WP_167026981.1|2422928_2424497_-|MFS-transporter
MPKKNTQPPPTGAPAAVGPVGREPAAVGPVGTGADIPDADAPAAGAVAAVPLAAVSDAAGVDATGPTRTPGTGAAESPAAPHGYRAVFAVREFRFVFAAHLLSLLGVVVSEIALTVLVYDLTGSPLLSALTFALGLLPYLFGGLLFAGVADRYPARRTLVTCDLICAACVAVMVLPSTPVAALLALRCAVAAVSPVFTGTRMAALTDILGEGDLYVLGRSLLRIVSQSALLAGYGVGGVLLAVIPARGAIGVTLGTFLCSALLLRLGTRKRPARKAAARDNARGDNARRDNARRDNARRDNAKAAKPHGMMRESLAGAGFLLRDRRIRALLLLFWIPAMFVVAPEALAAPYADAIDAGPAALGLMMCAMPIGHISAELYVGTALSPRARGRIVLPVAALGLVPLLVYAARPGLGWALPALALSGVGAAYVIGLDQWFVAAVPEERRGSAMTLLTAGLMTIQGLGMALAGAAAEFLPVHHVVAWSGGLGTLCCLLLVREVRATAPEAERTEVRDGSGRQVTTG
>NZ_CP050177.1|WP_167026978.1|2422408_2422918_-|MarR-family-transcriptional-regulator
MSKPLSLPFDPIARADELWQQRWGPVPSMGAITSIMRAHQILLAEVDAVVKPYGLTFARYEALVLLTFSKAGELPMSKIGERLMVHPTSVTNTVDRLVKSGLVDKRPNPNDGRGTLASITDKGREVVESATQELMRMDFGLGAYDAEECAEIFAMLRPLRVAANDFEDE
>NZ_CP050177.1|WP_167026975.1|2422001_2422340_-|DUF3817-domain-containing-protein
MKRSVLTRYRVMAYVTGVLLVLLTLGVIAKYVLDIDGASGFTSVVGIAHGWLYIVYLVFAFDLGAKAKWPVKRQIWVLLAGTVPTAAFFVERKVTRELAARLTDETPVTAKV
>NZ_CP050177.1|WP_167026972.1|2421055_2421481_-|hypothetical-protein
MLLPATSAEAANTTKYVDSNCPYAGCSSGDLYLKYRSSGVPNSALATFYGNVYNYAGQTISYNGATAVDYVFVFGPGDGSGTSVKNNAASATNCADADNYRVYFNSGYTGTAQLFEHAGGCFVAENFIAALKNNNASQHFA
>NZ_CP050177.1|WP_167026969.1|2420025_2420769_-|hypothetical-protein
MQSYEESVTVEQAGRNLQEECMAGFGFDIKFPPAGTNPPPSNNSMNMPRRYGITDRETAARYGYQLSESEEARPQGPQLSEAAVAVLTGRKGRGPNAELAPDTYKGKKIPKDGCAGSSFAKVGGRLDGSLPETLAYESQTKSQERPKVRSAIKDWSDCMKKSGYDVADPYDAVKLNPSSGNGQASQAEIATAIADIDCKKQTDLVKIWFEEETSIQHEQIAQNALALDELKKKNTAAVKAAERVLRG
>NZ_CP050177.1|WP_167026966.1|2418618_2419998_-|peptidoglycan-binding-protein
MDKEKEPRSAFPGLVSRRRWVTGVAAGAVLVSGAGLTAAQMIKSPAQAVADSVPPVPSVLTAPVERRVLTDSVIVRGTATAEQSVSVAPSGGSEAGAAVVTKLPLLSGAKIKAGQVLLEVSGRPVIALEGNLPVYRDLKPGAEGDDVAQLQRALEKLGHGSGADAKGHFGSGTKSALAMLYQSVGYDPMPADPDGDAAVESARDAVTAAQRAMEDSRDAVKGGGDKEADRRTERAEEDLRKAEEQLAGTLAKSGPMLPAAEVVFLKRFPARVDTVTTTVGATVSGPVLTVSSGALVVHGFLRQQQRGLVRVGQKVDIESELTGMSASGVVVSVGDTITSDQQPEGGGAVQPNSGPSGYRMAVKPEKDLDARLAGQDLRLTVQAASTGGKAIVVPVTAVFAAADGKTSVVVVDRTSHQRRVPVRAGASGDGYVEVRPAAGGRLAEGDRVITGVQAPPESR
>NZ_CP050177.1|WP_167026963.1|2417917_2418619_-|ABC-transporter-ATP-binding-protein
MGDDQPGRPPVIELRQAGLRYPGPPPFTALDGCDLTVHQGEFVTVVGPSGAGKSTFLNIVGLLDIPTRGSYLLDGFDTVNLRDRDRTALRGQRIGFVFQSFHLLPHRTAVENVALALVYNGTPRKARGDLARQALLRVGLGHRVEALPTTLSGGERQRVAIARALVGGPSLLLCDEPTGNLDTATADTILGLLEDLNQAGMTVLVITHDTAVAQRGCRTLTIRDGKMTERVKE
>NZ_CP050177.1|WP_167026960.1|2416706_2417921_-|ABC-transporter-permease
MKPPRSRLPWQDLLSESLAGILQRPARAALTSVGTLLGVGAFVAILGLTATASSQIDERFSLLSATEVTVEDVAGEQDEFSVLAFPSDADTRVEQLNGVEHAGVYWSVQLDEDHAVRASPITAAGSNGNTQVVAASSGVLEAAEPTLVEGRLFDRWHDRTDQQVAVVGAGVASRLGITTLETHPAVFIGDEAFTVVGIVSDVKRKADLLLSVVVPRSTAEQLWGAPKSDAKMLISTAPGAAVQVAAEAPVALDPAHPDYFKAIPPPDPRTLRSAVSGDLDELFLLLAVICLFIGTIGIANTTLVAVLERTGEIGLRRALGARSRHITAQFLTESAVLGTLGGLIGTSLGTLTVVIVAVARDWTPVISFATVAAAPGIGLFTGLLAGLYPAWRASRIQPVEALRH
>NZ_CP050177.1|WP_167026990.1|2427592_2429557_-|DUF1929-domain-containing-protein
MRYRYRPTDRFRKTLLGGGALVVLAGLNAPAALSFAGEKYHAYKISQPGYKQRYGSWELLDVPEEFRTNAIHAALLRTGKVLIIAGSGNSQKKFDKGTFDTILWNPADNSFRKIPTPEDFFCSGHSQLPDGRLLVAGGTARYEVLDGEVDRAGGGMRVKNESPDKAVTFKKGTRFRSPSGVEYVSRFDVTVPKAKRQFKISYARGGRMMPWRTKVTAGEARVFVEAAKAGPEALTTEAAQYEILGLKGKDADNLYGLAQKLTTEKQDFQGIKAAYEFDPRAEKYVPVSPMKEARWYPTLVTLDDGKVLAVSGLDDVGAVLTGDNEIYDPATKTWSKGPTRYFPTYPALFLTKGGKLFYSGSNAGYGPAEKGRQPGLWDVRTNTFTRVNGLTDVDQTETSASLMLPPAQDQKVMILGGGGVGESSLATSRTAIVDLKRESPGYVKGPSLPQGTRYLSSVLMPDDSVFTTGGSSDYRGRSASDIHKAQFYDPLTNAFRRAADPTVGRNYHSEALLLPDGRVVTFGSDPLFDDEDNTKLGTFEQRVEIYTPPYLHGGGEEDRPVLGTGPTTLDASGRATFATADADRITKARLMRPSAVTHTTDVEQRSIALTLTKGAGEVTVGVPKDPTLVPPGWYMLFVTNAEGVPSEAKWVRVG
>NZ_CP050177.1|WP_167026993.1|2429553_2431383_-|glycosyltransferase
MRPEGYDYDSHSCLAGPLTEPDPAAVYRVGYRSLLAQEPHRIRAVLLMTMAPLLSGVLLLYLVWPSHRTEREGGQRWLVAFDHVMLVSIGLIAFFMLVNVASVAHATLVARDPVPVPAEVGTRVAFLTTYVPGKEPLAMVRATLEGAVALRHQGLLDIWLLDEGDDPEARALCEELGVWHFTRNGVPEWNRPKGPHKARTKHGNYNAWLARHGDDYDFFASVDTDHVPLPNFLERMLGFFRDPDIAFVVGPQVYGNYTSPVTKAAESQQFLFHALIQRAGNRYHAPMFVGTNNVVRITALKQAGGLYDSITEDMATGFELHRRKNPLTGRFWRSVYTPDVLAVGEGPASWTDFFTQQLRWSRGTYETLIKQYWKAPFRMPPGRVVSYTLMLVYYPMTAVNWFLGILSCVLFLWLGASGTQVSSSVLLMLYSDAAAFQIGLYLWNRRHNVSPHEPRGSGGLAGMAMSALSAPIYLTSLGSALLRTRGRFVVTPKGGETTVDRLMTFRVHLFWAAVLVSSLVASVVLGHTHAAMRTWAVLALAIALAPVAIWVGTVRRERRAAGAVAPSVAATTQEPVPAPAPTTSAVTPTPTPAPATTALASTTTGGTES
>NZ_CP050177.1|WP_161309196.1|2431525_2431819_-|MTH1187-family-thiamine-binding-protein
MIVAFSVSPVGAGEDVGEYVADAVRIVRESGLPNRTDAMFTSIEGEWDEVMDVVKRAVAAVEARAPRVSLVLKADIRQGVTDGLTSKVETVERHLAG
>NZ_CP050177.1|WP_167026996.1|2431815_2432169_-|DUF3817-domain-containing-protein
MDIKTASALHRLRLVSAPEAVSFLLLLVCSVLKRTTDFNAVPAMGMIHGVLFILYVLFWAVAWQRTRWSFGTAALYFVLSVLPTGGFFAERKLKRAADDEVIASRARREAGEAKVGA
>NZ_CP050177.1|WP_167026999.1|2432333_2432972_+|AIM24-family-protein
MAQFRLQGSKVLAVDMSGDAVKAKNGSMVAYDGQMAFKKMSGGGEGIRGMVTRRLTGEQMVMMEVKGQGTCYFADRASEINLVSLHGDKLYVESSNLLCTDAGLRTGTSFTGLRGGATGNGLFTTTVEGTGQAAIMSDGPAVVLRVTPQYPLSVDPGAYIAHQGNLQQNFQSGVTFRTFMGEGSGEAFQIRFEGDGLVYVQPSERNTIGGDV
>NZ_CP050177.1|WP_167027002.1|2432971_2433622_+|AIM24-family-protein
MPFREVNSKMVEATVLPGQKMYSQRGAMLAYRGDVSFTPNMQGGQGGLASMIGRRVAGEAAPLMTVEGNGTVMFGHGGHHIQVIGLAGDTLYVEADRLLAFDGTLQQGTMFMGSQGGVMGMVRGQVTGQGLFTTTLKGHGAVAVMAHGGVIEVPITPGRPVHVDPQAYVAHHGDVRNKLSTALGWRDMVGRGSGEAFQLELSGNGAVYVQASEEKL
>NZ_CP050177.1|WP_167027005.1|2433618_2434413_+|AIM24-family-protein
MSGPVIHDPMTLPSDDNVNAYTFCVELKGSQWFLQKGKMIAYYGRIDFNGIGHGRFEGLLRTSFHSPLHAADWVVAEGSGKMLLADRAFDVNSYDLEDGNLTIRSGNLLAYQPSLALKQSIVPGFLTLIGTGKFVAASNGPVVFMEPPLKVDPQALVGWADCPSPCHHYDHGYMTGLLGGLRAMTGIGGASGEEHQFEFVGAGTVLLQSTEILMAEQPTGAVPQQAGVPGGGPGVPGHGPGGGQQGAAPRLPGQLGDLQRRFGL
>NZ_CP050177.1|WP_167027008.1|2434549_2435026_+|MarR-family-transcriptional-regulator
METETETRWLTEAEQCAWRTHLDVNRLLTHQLEKDLQPFGLTLNDYEILVNLSESAERRMRMSDLAAATLQSKSRLSHQITRMETAGLVRRENCESDRRGLFAVLTDAGMETMQKVAPFHVDSVRKHFIDLLSTEALADLSASLTPVAERLRGRRGKL
>NZ_CP050177.1|WP_167027011.1|2435098_2435476_-|hypothetical-protein
MRLQRTVAGALVTAGLALGIAATGTTPAAADTAFGCGYPQVCFYKTQADWDARRWTAAYKDVTSYFQNLSSGAMGAKWVHNSRNDDGALLRFSSGTYCLQPGWSWQTAPGAAGPTGIRIMDSPTC
>NZ_CP050177.1|WP_167027013.1|2435549_2436044_-|hypothetical-protein
MRLKRLILTLLGILALVLGSLLTAGPAQAAAPADHRAAGPALTAPPAPAGIGPAFAPAAVPPTISPAVTTTHVAPGGSYTCAYGNFCALAWDPTTASWKVFYLYNCARYALANWNGGGAYWNNQTPSARSTFYGSSGNVLKGPFAPGGGQQNYDWTLVWSIRNC

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Crispr_ID: NZ_CP050177_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_12

2672199-2672275

Orphan

Consensus_repeat	Method
GTCCTCAATCGCCGGACGGGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_12

>merge|NZ_CP050177|12|2672199-2672275|CRISPRCasFinder
GTCCTCAATCGCCGGACGGGCTTCGGGGCCGGTGGGCCGCGCGGCTTACTAGCTGTCCTCAATCGCCGGACGGGCTT

>NZ_CP050177|12|9|2672199-2672275|CRISPRCasFinder
GTCCTCAATCGCCGGACGGGCTT	CGGGGCCGGTGGGCCGCGCGGCTTACTAGCT
GTCCTCAATCGCCGGACGGGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167036609.1\|2670025_2670727_+\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP050177.1\|WP_167027556.1\|2668285_2669164_-\|zf-HC2-domain-containing-protein	unknown	unknown	gnl\|CDD\|379219
NZ_CP050177.1\|WP_167027571.1\|2674365_2675115_-\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|224527
NZ_CP050177.1\|WP_167027583.1\|2678251_2679346_-\|succinyldiaminopimelate-transaminase	unknown	unknown	gnl\|CDD\|236119
NZ_CP050177.1\|WP_167027565.1\|2672959_2673313_-\|DivIVA-domain-containing-protein	unknown	unknown	gnl\|CDD\|274639
NZ_CP050177.1\|WP_167027547.1\|2665092_2665758_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167027550.1\|2665874_2666348_-\|Sec-independent-protein-translocase-subunit-TatB	unknown	unknown	gnl\|CDD\|179287
NZ_CP050177.1\|WP_167027586.1\|2679922_2680918_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP050177.1\|WP_167036606.1\|2669160_2669847_-\|RNA-polymerase-sigma-factor-SigE	unknown	unknown	gnl\|CDD\|236606
NZ_CP050177.1\|WP_167027577.1\|2676399_2677395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167027568.1\|2673486_2674356_+\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|273657
NZ_CP050177.1\|WP_167027574.1\|2675251_2676331_-\|succinyl-diaminopimelate-desuccinylase	unknown	unknown	gnl\|CDD\|237264
NZ_CP050177.1\|WP_167027553.1\|2666484_2668197_-\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NZ_CP050177.1\|WP_167027580.1\|2677684_2678152_+\|ATP-binding-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167027562.1\|2672381_2672963_-\|DNA-3-methyladenine-glycosylase-I	unknown	unknown	gnl\|CDD\|377025
NZ_CP050177.1\|WP_167027541.1\|2663158_2663749_+\|DUF1003-domain-containing-protein	unknown	unknown	gnl\|CDD\|377629
NZ_CP050177.1\|WP_003966491.1\|2670922_2671090_-\|DUF3117-domain-containing-protein	unknown	unknown	gnl\|CDD\|371461
NZ_CP050177.1\|WP_167027559.1\|2671379_2672183_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|236163
NZ_CP050177.1\|WP_167027544.1\|2663812_2664973_+\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_CP050177.1\|WP_003985062.1\|2679460_2679781_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|224069

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167036609.1\|2670025_2670727_+\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	2.47008e-49
NZ_CP050177.1\|WP_167027556.1\|2668285_2669164_-\|zf-HC2-domain-containing-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	8.44918e-08
NZ_CP050177.1\|WP_167027571.1\|2674365_2675115_-\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	4.35658e-55
NZ_CP050177.1\|WP_167027583.1\|2678251_2679346_-\|succinyldiaminopimelate-transaminase	gnl\|CDD\|236119	PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed.	0
NZ_CP050177.1\|WP_003966491.1\|2670922_2671090_-\|DUF3117-domain-containing-protein	gnl\|CDD\|371461	pfam11314, DUF3117, Protein of unknown function (DUF3117). This family of proteins with unknown function appears to be restricted to Actinobacteria.	3.05791e-23
NZ_CP050177.1\|WP_167027550.1\|2665874_2666348_-\|Sec-independent-protein-translocase-subunit-TatB	gnl\|CDD\|179287	PRK01371, PRK01371, Sec-independent protein translocase protein TatB.	1.18521e-49
NZ_CP050177.1\|WP_167027586.1\|2679922_2680918_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.71425e-10
NZ_CP050177.1\|WP_167036606.1\|2669160_2669847_-\|RNA-polymerase-sigma-factor-SigE	gnl\|CDD\|236606	PRK09647, PRK09647, RNA polymerase sigma factor SigE; Reviewed.	3.60735e-125
NZ_CP050177.1\|WP_167027568.1\|2673486_2674356_+\|dihydropteroate-synthase	gnl\|CDD\|273657	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by model TIGR00284. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	3.48033e-93
NZ_CP050177.1\|WP_167027574.1\|2675251_2676331_-\|succinyl-diaminopimelate-desuccinylase	gnl\|CDD\|237264	PRK13007, PRK13007, succinyl-diaminopimelate desuccinylase; Reviewed.	0
NZ_CP050177.1\|WP_167027553.1\|2666484_2668197_-\|PDZ-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.53283e-89
NZ_CP050177.1\|WP_167027562.1\|2672381_2672963_-\|DNA-3-methyladenine-glycosylase-I	gnl\|CDD\|377025	pfam03352, Adenine_glyco, Methyladenine glycosylase. The DNA-3-methyladenine glycosylase I is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.	2.75413e-95
NZ_CP050177.1\|WP_167027541.1\|2663158_2663749_+\|DUF1003-domain-containing-protein	gnl\|CDD\|377629	pfam06210, DUF1003, Protein of unknown function (DUF1003). This family consists of several hypothetical bacterial proteins of unknown function.	6.83445e-46
NZ_CP050177.1\|WP_167027565.1\|2672959_2673313_-\|DivIVA-domain-containing-protein	gnl\|CDD\|274639	TIGR03544, cell_division_initiation_protein_DivIVA, DivIVA domain. This model describes a domain found in Bacillus subtilis cell division initiation protein DivIVA, and homologs, toward the N-terminus. It is also found as a repeated domain in certain other proteins, including family TIGR03543.	0.0013495
NZ_CP050177.1\|WP_167027559.1\|2671379_2672183_+\|enoyl-CoA-hydratase	gnl\|CDD\|236163	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional.	2.94721e-69
NZ_CP050177.1\|WP_167027544.1\|2663812_2664973_+\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	9.79093e-131
NZ_CP050177.1\|WP_003985062.1\|2679460_2679781_-\|ferredoxin-family-protein	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	3.13459e-11

>NZ_CP050177.1|WP_167027559.1|2671379_2672183_+|enoyl-CoA-hydratase
MADTVLYEVSDGLATITINRPEARNALDVATKVALRDALEAAGADPAVRGVLLTAAGDRAFSVGQDLKEHVALRAADRERGSNDTMRTVREHYNPIILAITSMRKPVVAAVNGVAAGAGLGFALAADYRVVSDKASFTTAFAGVALTADSGVSWTLPRLIGAGRAADLLLFPRSVPADEALSLGLVHRVVPAESLAAEALAVARTLASGPTVAYAALKESLAYGAGRTLGEALAKEDELQSAAGSSDDHGIAVEAFLSKTTPTFVGR
>NZ_CP050177.1|WP_003966491.1|2670922_2671090_-|DUF3117-domain-containing-protein
MAAMKPRTGDGPLEVTKEGRGIVMRVPLEGGGRLVVELTPDEADALGDALKKVVG
>NZ_CP050177.1|WP_167036609.1|2670025_2670727_+|O-methyltransferase
MRVPGRCGYSHRCAANGDKERVITANRQTSWAFSDAFVAEDEALEWARDRAHETGLRSVSPGTGAALRLLAATLDAKSVAEIGTGTGVSGTYLLQGMRPDGVLTTVDTEPERQQFARQAFRAAGFTGNRARFIPGRALDVLPRLADGGYDLVFCDGDRLESLDYLDESLRLLRPGGLVCFEGMFADGRTVDSAAQPAEVLRLRELLRAVRESHELQSALLPVGDGLLCAVRRG
>NZ_CP050177.1|WP_167036606.1|2669160_2669847_-|RNA-polymerase-sigma-factor-SigE
MLRRFLRSAGEPKSVTNFADRSRSNDSAVTATFASDADAQAWTPPSWEEIVSTHSGRVYRLAYRLTGNQHDAEDLTQEVFVRVFRSLSTYTPGTFEGWLHRITTNLFLDMVRRKQRIRFDALGDDAAERLPSREPSPQQVFHDTHFDADVQQALDTLAPEFRAAVVLCDIEGLSYEEIAATLGVKLGTVRSRIHRGRSHLRKALQHRSPEARAEQRAFVSVAGEGGTA
>NZ_CP050177.1|WP_167027556.1|2668285_2669164_-|zf-HC2-domain-containing-protein
MSATSPTPAEQHLGDRLAALVDGELDHDARERVLAHLATCAKCKAEADAQRRLKNVFAQAAGPPMSAGLLARLQGLPGGGPSGRDDDGPRRGLFDGGTFGNGVFGAGSGGFDDYDDYEGYEPAAAHSGLTPGGSGFRIHEVGREAAERSPWRARRFAFAAASAVSFAAMALGGSVPLGTAADVLPRGAGNNVTPLRAPAGNTAPAPFGAETGRRFGTAPPTVSLVRQAPSAPPGMLNSPYLSSPYLTTPSLAPFLQPPGPALQVDAPSGTSPTAAPRPSQLAAPTLPLSPAR
>NZ_CP050177.1|WP_167027553.1|2666484_2668197_-|PDZ-domain-containing-protein
MDDGKPTGPKAKWWSRPAPGRAPEQEPVRWDEAGAAGTAEVPPRPEASGAHVPSVPPQERPRPLHEPDAYGTPPYGGPGPWAPAPPVQPPTPAHGVFLPPSADHPQDDPYRVPEAGDPYRVPEAGDPYRVPEAGDPYRVPEAGDPYRVPEAGAPFGAPGSGHGSAPGAPGGPGLPPAAQWRQYDPWGAPGQQPFTEHGEAPRPRRRVGIVSALLFALLTGVVGGAVGANVERNNGFTDVELPQAGPDRGDRAPDSVAGIAASALPSVVTLHVSGADEQGTGTGFVLDRQGHILTNNHVVQPAGASGEISVTFSGGETARAKIVGKDSGYDLAVVKVSGVSGLKPLPLGNSDNVRVGDPVVAIGAPFDLSNTVTSGIISAKERPITAGGEKGDGSDVSYVDALQTDAPINPGNSGGPLVDSKARVIGINSAIRAADTGGTAEGGQAGSIGLGFAIPINQGKRVAEELINTGKAAHPVIGVSLDMEYTGDGARVGKKAADGSPSVVPGGGADKAGIRSGDVITEVDGQRVHGGQELIVKIRAHRPGDRLELTVVRGGRERTVTLTLGSANGT
>NZ_CP050177.1|WP_167027550.1|2665874_2666348_-|Sec-independent-protein-translocase-subunit-TatB
MFNDIGPLELVTLVVLAVLVFGPEKLPKVIQDATRFIRKIREFADTAKEDIKSELGPEFKDFEFEDLNPKTFVRKHLTDGEEDTFGLKEIRSSFDLRKEITEVADAVNNRDDAKAAAKDTPMAATTAVNGSGGTPDLLKKRENPDRDDRPPFDADAT
>NZ_CP050177.1|WP_167027547.1|2665092_2665758_-|hypothetical-protein
METTSRVGAQTAPSSSTAEGVPAARRTVEGYLRAAFPWYGLDEAFTGPRWLMQVGAAADGTVQHGSTGHGEEPTIRPDASGADKERFAVVVTVAAGPVRRTGDGTGHLDATTVSSAAWLAGSGLLMSTWPAQLDHMLRDDWLAQQTEAAFELADDLEGADWSALSLPVDGVPTPFHYRETEFGWVLAGSAPSGVHIGAYGRGMSAYGLGFSAIEDITAYAH
>NZ_CP050177.1|WP_167027544.1|2663812_2664973_+|Mrp/NBP35-family-ATP-binding-protein
MATDTYGTVLPAEDAVRDALATVNDPEIHRPITDLGMVKSVDIGADGAVAVTIYLTVSGCPMRDTITRTVTEAVAAVAGVTRVDVTLDVMSDEQRKDLAASLRGGKAEREVPFAQPGSLTRVYAVASGKGGVGKSSVTVNLAAAMAADGLKVGVVDADIYGHSVPRMLGVDGKPTQVENMIMPPSANGVKVISIGMFTPGNAPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGTGDIAISVAQLVPNAEILVVTTPQQAAAEVAERAGSIAVQTHQKIVGVVENMSGLPCPHCDEMIDVFGTGGGRAVAEGLTKTTGATVPVLGAIPIDVRLREGGDEGKPVVLSDPDSPAGAALRGIANKLGARQRGLSGMSLGITPRNKF
>NZ_CP050177.1|WP_167027541.1|2663158_2663749_+|DUF1003-domain-containing-protein
MASDRTDKDGAAKERARAGSTALTRGPRVRLDQPRPQRRRLLPDYDPEAFGRLSERVARFLGTGRFIVLMTLVIILWVIWNITVPKALRFDEYPFIFLTLALSLQASYAAPLILLAQNRQDDRDRVTQEQERVQNERSIADTEYLTREIAALRMGLGEVATRDWLRSELQDLMKDLGEQRERLAEDGRPERDESDR
>NZ_CP050177.1|WP_167027562.1|2672381_2672963_-|DNA-3-methyladenine-glycosylase-I
MTAPVGVVEGADGRLRCPWGTSAEDYVAYHDSEWGRPVHGDDALFERISLEAFQSGLSWITILRRREGFREAFGSFHIPTVAKFTDADRTRLLADAGIIRNRAKIDATLANAGVLVGWEPGELDALVWSHAPDPATRPAPRTGADVPAVTEESAALAAALKRRGIRFVGPTTAYALMQACGLVNDHMEACDFR
>NZ_CP050177.1|WP_167027565.1|2672959_2673313_-|DivIVA-domain-containing-protein
MFLFLLIAMVVVVAGVTLAVVGGGDRAVLPDVAPEQLVDPLPATRPVGRADVEALRLPVGLRGYRMADVDDALGRLGAELAERDARIAELEAALAGAQATAVSSPDLFKKPGWEGPR
>NZ_CP050177.1|WP_167027568.1|2673486_2674356_+|dihydropteroate-synthase
MRGTLRLGRREFGADEPVIMAIVNRTPDSFYDQGATFRDEPALDRVEQAVSHGAAIIDIGGVKAGPGDEVSAEEEARRTVGFVAEVRRRHPDVVISVDTWRHEVAEAVCDAGADLLNDAWGGVDPKLAEVAARYGAGLVCTHAGGAEPRTRPHRIAYDDVMADILRVTLGLAERAVALGVREDGIMIDPGHDFGKNTRHSLEATRRLGEMAETGWPVLVSLSNKDFVGETLDRPVKERLIGTLATTAVSAWLGARVYRVHEVAETRQVLDMVASLAGHRPPAVARRGLA
>NZ_CP050177.1|WP_167027571.1|2674365_2675115_-|TIGR00730-family-Rossman-fold-protein
MGMPEGARKPEEQRLGPVIRRREQVQAGTTDQRLLDTEGDSEWVHTDPWRVMRIQSEFVEGFGALAELPSAISVFGSARTPVGTPEYEAGTRIGRALVEAGFAVITGGGPGAMEAANKGAREAKGVSVGLGIELPFEQGLNPHVDIGVNFRYFFVRKTMFVKYAQGFVVLPGGLGTLDELFEALTLVQTRKVTRFPIVLFGTEYWGGLVEWLRNTVVAQGKASEKDLLLFHLTDDVDEAVALVTKETGK
>NZ_CP050177.1|WP_167027574.1|2675251_2676331_-|succinyl-diaminopimelate-desuccinylase
MPDTALDLTLDGPALTAALVDFPSVSGDEKALADAIELALRPLPHLTVERYGNNIVARTNRGLGERIILAGHIDTVPIADNVPSRLDDNGVLWGCGTSDMKSGVAVQLRIAATVPEPNRDLTFLFYDNEEVAAHLNGLGHVAKAHPDWLEGDFAILLESSDGEVEGGCQGTLRVLLRTEGERAHSARGWMGSNAIHAAAPILARLAAYEPRKPVIDGLEYHEGLNAVRIEGGVATNVIPDACTVTVNYRYAPDLGEAEALAHVHEVFADCGVAEFVVDDHSGAALPGLSHPAAAAFMAAVGGTARPKFGWTDVARFGGLGIPAVNYGPGNPLFAHKRDEHVVVERITHCENRLREWLTA
>NZ_CP050177.1|WP_167027577.1|2676399_2677395_+|hypothetical-protein
MPLQYGGRVSDTVSTSRRGRPLRVAAAFAVLLGLVAYVVVQYVTGGGGPPRCTVRAAGAGSGDGGPVYEMTPEQAGNAAVISAVGTTRGLPERAVTIALATALQESALRNLGHGDRDSLGLFQQRPSKGWGTAAQILDPVYAAGQFYDHLVKVPGYSRLPLTEAAQRVQRSGFPQAYAKHEPDAALLSAALTGRAPAALTCSSLESAVPGDPAKVRAELVRSFGPGVLPKAANVSAGTPGHEVFVPVAATVAADGAAKDTPGGTKDGPAVRRGWELAQWAVARASVLRIDEVAYAGRVWSAKDAGQGWRTDDGAGSGTSKAAAEVQIRTAR
>NZ_CP050177.1|WP_167027580.1|2677684_2678152_+|ATP-binding-protein
MSLPLTRRIARAALLIAAGAAPVVGAAGSAGAAALPQTTDLGAVSALDGAAVGDTVDSGARTTTAVAGEAGSQAVKKTVPAAGKTVGAAGKTVTPAAQKLAGDAAGSAGEALGETASAASGSAAPASMLGGLPTGGLPKGGLPTGGLPVGGLPIG
>NZ_CP050177.1|WP_167027583.1|2678251_2679346_-|succinyldiaminopimelate-transaminase
MSTVSSRLPVFPWDKLEPYKATAAAHPDGIVDLSVGTPVDPVPDAVQRALSEAANSPGYPTVWGTPELRDALTGWAERRLGARGVTHSNVLPVVGSKELVAWLPTQLGLGAGDRVAYPRLAYPTYEVGARLCGAEPVPYDDPTELDPAGLRLLWLNSPSNPTGAVLGQDELTRIVAWAREHDVLVFSDECYLELGWEADPVSVLHPDVCGGSYDGIVAVHSLSKRSNLAGYRAAFLVGDSAVLGELLQIRKHGGMMTAAPVQAATVAALADDTHVREQRERYAARRAALRAALEAHGFRIDHSEASLYLWSTRDEPCWDTVAHLAGLGILVAPGDFYGPAGERHVRVALTATDERIEAAVKRLG
>NZ_CP050177.1|WP_003985062.1|2679460_2679781_-|ferredoxin-family-protein
MTYVIAQPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDDTPEEWKDYYKANVEFFDELGSPGGASKLGLIERDHPFIAALPPQNG
>NZ_CP050177.1|WP_167027586.1|2679922_2680918_+|GNAT-family-N-acetyltransferase
MEFTAGGRFEVRMTQADVGKRVSVRQLTESGGPAEKFTDTVGVLTSWDDGVLLITRRTGESVRIPESALVAGKVVPPAPARRRGPAATYAELALVGARAWQPVESEPLGAWRLRAAAGFTRRANSALPLGDPGVPLDEALERVRGWYGERGLPAYVQTATGAEGTQESLCAELEKRDWYAEVSAEMRIAALAPLGDRDADVARVRLDRTCDEAWLGRYQRSKAPGPHVLHVLGSGPSVWFATVPGEAGTPAAIGRCVVDGRWAGFMAVEVEPDQRRRGLATAVMTALARRALEEGASAAWLQVESRNDGARALYEGMGFAVHHHYHHYRPA

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Crispr_ID: NZ_CP050177_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_13

2876873-2877142

Orphan

Consensus_repeat	Method
GTCCTCAATCGCCGGACGGGCT	PILER-CR

4 spacers

The CRISPR arrays of NZ_CP050177_13

>merge|NZ_CP050177|13|2876873-2877142|PILER-CR
AGCCCGTCCGGCGCTTGAGGACATCCTTGACCCGCACGGGACAACGGGCGCAACAATCCAGCCCGTCCGGCGATTGAGGACGTCTTTGACCGCAACGGTCACGGCCCGACCGCAACCCCTCTCAAGCCCGTCCGGCGATTGAGGACGTCTTTGACCCGCACGGGCAACGGGCACGAGCCGACCCCAGCCCGTCCGGCGCTTGAGGACAGCCTGAGCCGCGCCCGCGCACCCAGCCGACGCGCAAACCAAGCCCGTCCGGCGATTGAGGGC

>NZ_CP050177|13|3|2876873-2877142|PILER-CR
AGCCCGTCCGGCGCTTGAGGAC	ATCCTTGACCCGCACGGGACAACGGGCGCAACAATCC
AGCCCGTCCGGCGATTGAGGAC	GTCTTTGACCGCAACGGTCACGGCCCGACCGCAACCCCTCTCA
AGCCCGTCCGGCGATTGAGGAC	GTCTTTGACCCGCACGGGCAACGGGCACGAGCCGACCCC
AGCCCGTCCGGCGCTTGAGGAC	AGCCTGAGCCGCGCCCGCGCACCCAGCCGACGCGCAAACCA
AGCCCGTCCGGCGATTGAGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167028060.1\|2881525_2882383_-\|biotin--[acetyl-CoA-carboxylase]-ligase	unknown	unknown	gnl\|CDD\|223417
NZ_CP050177.1\|WP_167028039.1\|2871001_2872477_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|274576
NZ_CP050177.1\|WP_167036652.1\|2867549_2869139_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167028042.1\|2872603_2873872_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|380079
NZ_CP050177.1\|WP_167028074.1\|2889084_2890524_-\|NAD(P)H-quinone-dehydrogenase	unknown	unknown	gnl\|CDD\|236112
NZ_CP050177.1\|WP_167028077.1\|2890744_2891182_+\|gamma-glutamylcyclotransferase	unknown	unknown	gnl\|CDD\|372719
NZ_CP050177.1\|WP_167028036.1\|2870240_2870927_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP050177.1\|WP_167028062.1\|2882556_2884143_+\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_CP050177.1\|WP_167028024.1\|2863097_2863616_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167028033.1\|2869178_2870162_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP050177.1\|WP_167028071.1\|2887952_2888930_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP050177.1\|WP_167028068.1\|2886110_2887862_+\|biotin/lipoyl-binding-protein	unknown	unknown	gnl\|CDD\|227111
NZ_CP050177.1\|WP_167028030.1\|2865539_2867279_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP050177.1\|WP_167028065.1\|2884686_2885292_+\|septum-formation-inhibitor-Maf	unknown	unknown	gnl\|CDD\|178901
NZ_CP050177.1\|WP_167036655.1\|2884201_2884405_+\|acyl-CoA-carboxylase-subunit-epsilon	unknown	unknown	gnl\|CDD\|379386
NZ_CP050177.1\|WP_167028048.1\|2875025_2876573_-\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP050177.1\|WP_167028027.1\|2863945_2865382_+\|chromosome-partitioning-protein-ParB	unknown	unknown	gnl\|CDD\|319249
NZ_CP050177.1\|WP_167028045.1\|2874619_2874934_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167028054.1\|2878362_2879163_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181069
NZ_CP050177.1\|WP_167028057.1\|2879955_2881113_-\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167028060.1\|2881525_2882383_-\|biotin--[acetyl-CoA-carboxylase]-ligase	gnl\|CDD\|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	2.0772e-60
NZ_CP050177.1\|WP_167028039.1\|2871001_2872477_-\|FtsX-like-permease-family-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	1.27306e-12
NZ_CP050177.1\|WP_167028030.1\|2865539_2867279_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	7.74148e-137
NZ_CP050177.1\|WP_167028042.1\|2872603_2873872_-\|L,D-transpeptidase	gnl\|CDD\|380079	pfam17964, Big_10, Bacterial Ig domain. This entry represents a bacterial Ig-like domain found associated with transpeptidase domains.	2.13412e-72
NZ_CP050177.1\|WP_167028074.1\|2889084_2890524_-\|NAD(P)H-quinone-dehydrogenase	gnl\|CDD\|236112	PRK07845, PRK07845, flavoprotein disulfide reductase; Reviewed.	0
NZ_CP050177.1\|WP_167028077.1\|2890744_2891182_+\|gamma-glutamylcyclotransferase	gnl\|CDD\|372719	pfam13772, AIG2_2, AIG2-like family. This family is found in bacteria and metazoa.	6.36673e-23
NZ_CP050177.1\|WP_167028036.1\|2870240_2870927_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	3.72812e-104
NZ_CP050177.1\|WP_167028054.1\|2878362_2879163_-\|enoyl-CoA-hydratase	gnl\|CDD\|181069	PRK07657, PRK07657, enoyl-CoA hydratase; Provisional.	3.94262e-75
NZ_CP050177.1\|WP_167028048.1\|2875025_2876573_-\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP050177.1\|WP_167028071.1\|2887952_2888930_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.42133e-83
NZ_CP050177.1\|WP_167028057.1\|2879955_2881113_-\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	1.04918e-30
NZ_CP050177.1\|WP_167028065.1\|2884686_2885292_+\|septum-formation-inhibitor-Maf	gnl\|CDD\|178901	PRK00148, PRK00148, Maf-like protein; Reviewed.	2.70546e-96
NZ_CP050177.1\|WP_167036655.1\|2884201_2884405_+\|acyl-CoA-carboxylase-subunit-epsilon	gnl\|CDD\|379386	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit. This family includes the epsilon subunits of propionyl-CoA carboxylase, EC:6.4.1.3, and acetyl-CoA carboxylase, EC:6.4.1.2. These enzymes are involved in the biosynthesis of long-chain fatty acids. The epsilon subunit is necessary for an efficient interaction between the alpha and beta subunits of these enzymes.	9.04293e-10
NZ_CP050177.1\|WP_167028027.1\|2863945_2865382_+\|chromosome-partitioning-protein-ParB	gnl\|CDD\|319249	cd16390, ParB_N_Srx_like, uncharacterized family distantly related to the N-terminal domain of the ParB/Srx superfamily. Uncharacterized proteins distantly related to the N-terminal domain of the ParB superfamily, primarily involved in bacterial and plasmid parABS-related partitioning systems. A small minority of proteins in this family include a C-terminal inorganic pyrophosphatase domain. Also within the ParB superfamily is sulfiredoxin (Srx), which is a reactivator of oxidatively inactivated 2-cys peroxiredoxins. Other families includes a putative regulator in the biosynthetic gene cluster and a family containing a Pyrococcus furiosus nuclease and putative transcriptional regulators SbnI (Staphylococcus aureus siderophore biosynthetic gene cluster ) and EdeB (Brevibacillus brevis antimicrobial peptide edeine biosynthetic cluster). Nuclease activity has also been reported in Arabidopsis Srx.	1.47836e-67
NZ_CP050177.1\|WP_167028033.1\|2869178_2870162_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.09712e-07
NZ_CP050177.1\|WP_167028062.1\|2882556_2884143_+\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP050177.1\|WP_167028068.1\|2886110_2887862_+\|biotin/lipoyl-binding-protein	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0

>NZ_CP050177.1|WP_167028048.1|2875025_2876573_-|histidine-ammonia-lyase
MDMHTVVLRPTGTTAEDVIAVARGHAKVEIGAEARSAIAEARKVVDALAAKPEPVYGVSTGFGALASRHIGPDLRAQLQRNIVRSHAAGMGPAVERDVVRALMFLRLKTLASGHTGVRPEVAQTMADVLNAGITPVVHEFGSLGCSGDLAPLSHCALTLMGEGDAEGPDGIVRPAGELLAAHGITPVELREKEGLALLNGTDGMLGMLVMALADLHRLYTSADITAALTLEALLGTAKVLAPELHAIRPHPGQGASADNMLRVLAGSGLTGHFQEDAAPRVQDAYSVRCAPQVAGAGRDTLAYARIVADRELAAAVDNPVVLRDGRVESNGNFHGAPVAYVLDFLAIAAADLGSIAERRTDRLLDKNRSHGLPPFLADDAGVDSGLMIAQYTQAALVSDMKRLAVPASVDSIPSSAMQEDHVSMGWSAARKLRTAVDNLTRIIAVELYAATRAVELRAGLTPAPASRAAIDALRAAGVEGPGPDRFLAPDLAGADAFVRDGRLIAAVEAVTGPLA
>NZ_CP050177.1|WP_167028045.1|2874619_2874934_+|hypothetical-protein
MSVARRPLLTATAAGTLLCALWFVPSAKAAEEHSGPEQQPVAAGQSFTSAGLSTTSEDSGTSQPLALADTGSVSTTPYLIGGTAFLGIGAGFVAYSARRSASLI
>NZ_CP050177.1|WP_167028042.1|2872603_2873872_-|L,D-transpeptidase
MEIRVMTDSKRRRGLMAASALLGGVLVLSACSDGGDKDAGAADSTKSSQAQVDEAAAKATSEAKIVIAPGDGASNAGINDDAKVTVTKGTLTDVTMTTADGTAVKGTVAADGLSWKPDGQLERSTTYKIAATAKDGKGRKAFENASFTTVSPANSFIGNFTPEDGSTVGVGMPVSINFDKAITDQKAVQDGITVTSSSGQQVVGHWFSQQRLDFRPDQYWKGGSTVTLKLNLDGVEGAKGLFGVQQKTVTFKIGRNQVSTVDAKAKTMTVTQDGKTIKTIPISSGSPDNPTYNGQMVISEKFKETRMNGATVGFTDDDGKGEYDIPDVPHAMRLSTSGTFIHGNYWGAPSVFGSVNTSHGCVGLQDVKGAGDANMPAAWFYDHSLVGDVVIVKNSPDKTIKPDNGLNGWNMSWSEWQAGSQA
>NZ_CP050177.1|WP_167028039.1|2871001_2872477_-|FtsX-like-permease-family-protein
MFFTYLRRELRRRRKAALVVASGLALGIALVIVVNSVSAGMGNAQDKVLQSLYGLGTDMTVTKAAPAATGGGTDRPRFRFDAQDGDGKAQSSDRVVVQGFETLASSTVTKVADQSGVSGAVGGLSLNVLKINGQFTRGEFKPDENGGTRREGGGGGGTGGRVSGGGANFDVDSFTLYGADVTEPALGPLTSSKITSGRTFKTTETDAKVAVVDSAYAKKNNLSVGKTLTVSGTKYSIIGVATADSGDAAANAYLPLKQAQTLSDSKDKITTVYVKASDSQQISAVKSTIQKNIPGTTVTTSADLADTVSGSLSTASDLATSVGKWLSIAVLIAAFLVAGLLTSSAVSRRVREFGTLKALGWKSGRVTRQVIGEALVNGLLGGVLGIALGVGGAYLVTAISPTLKAQIASASTGRGGFGGGGGGGGGGGGFGGGQARQTASKALDVALTAPVSLATIGIAVALAVGGGLIAGGFGGWRASRLRPADALRRVE
>NZ_CP050177.1|WP_167028036.1|2870240_2870927_-|ABC-transporter-ATP-binding-protein
MYQLKGVTKVYHRGKKPVHALAGVDLTIEDGGRLVIQGPTGGGKSTLLQMLGALDRPTAGTVELDGVDLGSLPESRLTKVRAESIGFVFQSFNLIPTLTAQENVETALVPLGLKGAARRQQAAEALESVGLGERLGHVPGELSGGQQQRVAIARALVKRPKVLLADEPTGNLDESMRDEIMELLEGLWKEHGLTFIMVTHDSSIARRAPRLATIRKGKVTVTENATAA
>NZ_CP050177.1|WP_167028033.1|2869178_2870162_-|GNAT-family-N-acetyltransferase
MLITLGSPPTDAETDAWHAVVTAAHVLDLPASVPEPSRSETAGKLRLPPVSGRNKHLVSTAADGSYDGVASLVLFTEEPHLHTAFLDVLVVRPDARRGGVGAALWTAIRDELAAAGRTSVSTVLELGGAGEAFVDSLGFTNVLPLGWYVMRVRQTLDDVPEPALPPGLRFADWSGVVPDALAEGFSRAHDAMEDTPGGALEERVPRWDTRRVRAAARLIEDRGGAILTSAVIDTTAGDAVVGYTELVLRDPAGTRAVQYDTVVVPSHRGRGLGRAVKRHLLGTLHELHPGIREISTTVADSNTSMIAVNEALGYRRERPVGLFLAKL
>NZ_CP050177.1|WP_167036652.1|2867549_2869139_+|hypothetical-protein
MPLLVTAATVPFYVLWAVVLATGGGDLAAQLAWAGFMARHPGSAYNLSWYGGTHTANYSVLAPPLMALLGVRTTSVLAGLAGTWAMAALFVRAKVPHALWPALLGALALWCNVASGRTTFAVGVAVGLAALLVLLRSGRPRPVLVAASLSALTALASPVAALFLVVAGAAYLLDRRWSRAAALIGPPFLVVGAVTLLFPFHGEQPMATEKLSMPLFACAAVWLAAPRAPRGWLTVRYGAVVYAVGVVLTYSIASPIGTNVERLIGLGGPPVLLAALLTRGLEPSRLTSLVRGGPLRVLPHLVLAAAVVVNTGWVIDKTDDDLGVSNSVPSWAAHPEGVIAELDRLGADRTRVEVVPARNHREAEVLAPYVTMARGWNRQLDVERGRLFYDGTFSPATYRAWLDRWAVGFVVLPDARPDSPAAAEAALVRDPPDWLEPVWHDRGWAVYRVRDAVPLVSAPAAVVRGGDAELVVRMPAAGSVTVRIAYSPWLRAPGACVARAGEWTRLTVTRGGEYRLGSAYRLFRSDGCG
>NZ_CP050177.1|WP_167028030.1|2865539_2867279_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MRERAQLAMKHVSKTYGDRPVLDQVSLTVRPGEKAGIIGENGSGKSTLLRLLAGAERPDDGEITVRFPGGTGHLAQTLDLAPPSGAGHRDRIVRDTDLEADRARTVQDAVDAALADLRDLERRLRAAEAALGSAGPAELAAYGDLLTAYEERDGYRAETRVDTALHALGLAHLTRDRPLDSLSGGERSRLALACVLAPAPELLLLDEPTNHLDLRATTWLEDQLRTHRGTVLAVTHDRVFLERIATTILEVDRDTGAVTRYGDGWAGYRAAKAADRRRRAQDHAEWLAEVSRTEEQVAAAGQRLAVTGKDPGQGFGKHRRSHETKLSGQVRAARERLARLRREPVPAPPEPLRFTPGLRTDSAPGAAGTELLLSLEGVTVGDRLRVDALSVGTGARLLVTGPNGAGKTTLLRVLAGELRPDSGTVRGPDRIRRGAAGAGGVGYLPQELPAVASPLPLLAAFAAGRPGPPDEHADELLGLGLFREADLRVPVAALSIGQRRRLELARLVTRPADLLILDEPTNHLALGLVEELEAALVTYAGAVVVVSHDRRFRDGFAGRRLELRAGRVAEPAPAGRGAP
>NZ_CP050177.1|WP_167028027.1|2863945_2865382_+|chromosome-partitioning-protein-ParB
MSGSSRTPSQPRGARALAGGLAAGALVLGTLLTGSGPALAADAPATVPAAPVSCTGPNAAALCARPGDLLDVTLDQLHPTQPAIGFDQIYYKLGRYSSPKDEQAGDLNKRFDDWCETNGQEEAASALPGARISDPSSFTCTVAVGDETPDTLAQMKTVVVGPGGALYLTDGHHTLTSFLETPDGGPRTHIRLRVTGNLSTLSTAAFWKTMQDNKWVWLRDEKNDPITVDQLPTRLGLASFHDDPYRGLVYLTRDIGYQAPAEAAEFLEFSWGTWLRGRLDLASYDLRDPASYLSAVRTASEAMSATPGDTEITPGLTADQAGRMAAWNDGKKPTGGEFGKLGLPLSDKKPGKLAFALDYRAKVAVPPACTKTLTGAYTGPLVVTSGVTCLDRTRLTGPVVVRAGASLVSRGADITGPVQAVGARTVSLCGTRLTGPLSVVNTTDRLTLSGPGCTANTLNGPVQLVGNPAEAPVPAPAG
>NZ_CP050177.1|WP_167028024.1|2863097_2863616_-|hypothetical-protein
MSEPVRAPEPPGRREEPLQRLLFGGVYGTVLASALAAALDHDTGPDDPGYDAVWIMVAALVSATGHGYAHAIAHRTADEKPVTASTVRSVLTEWPLVAAAVPTGALLLGSFWGWWSENAAIDAALTVNTAALFGWGLWAARTAGRDWWAACRVGAVDVLIGLVIVAANVLTK
>NZ_CP050177.1|WP_167028054.1|2878362_2879163_-|enoyl-CoA-hydratase
MGGSEQRYGDFVVVRKSGYVAELVLDRPKAMNAVSTEMARSLAAACTALGADRDVRVTVLTSTHARAFCVGADLKERASFTDADLVRQRPTTRAAYTGVLELPMPAIAAVHGFALGGGFELALACDMIVADRTAVVGLPEVSVGVIPGGGGTQLLPRRVGAARAAELIFTARRLEAAEARDLGLVDRLVDEGDDREEALALADRIAANSPVGLRAAKRALRLGQGLDLRAGLEVEDAAWRSVAFSGDRAEGVAAFNEKRTPQWPGE
>NZ_CP050177.1|WP_167028057.1|2879955_2881113_-|adenylate/guanylate-cyclase-domain-containing-protein
MTVDDSSGADAQPPKPTPDPSPHSTPHHIVDHTAEPTDDPLAIRLEQLILGADRRYTPFQAARTAGVSMDLASRFWRAMGFADIGQAKALTEADVLALRRLAGLVEAGLLSEPMAIQVARSTGQTTARLAEWQIDSFLEGLTEPPEPGMTRTEVTYPLVELLLPELEEFLVYVWRRQLAAATGRVVQAADDDEMVDRRLAVGFADLVGFTRLTRRLEEEELGELVEAFETTSADLVAAHGGRLIKTLGDEVLFAADDAGTAAEIALRLIETMTHDETMPALRVGIAFGTVTTRMGDVFGTTVNLASRLTSIAPKDTVLVDGAFAEDLIRTGEAPASEAGAAEAAAEAEKEGRETPSYRFGLQPMWQRPVRGLGVVEPWLLARRTT
>NZ_CP050177.1|WP_167028060.1|2881525_2882383_-|biotin--[acetyl-CoA-carboxylase]-ligase
MSDPDTPHSRWSDLERPPLNAQALRRGLIRPGGLWTSLDVVTTTGSTNSDLAAAAVARDPRAEGAVLVAEEQTAGRGRMDRRWSAPARSGLFFSVLLTPGDAVPVERWGWLPLLTGVAVATAVARSAGVDTALKWPNDLLVTVGGEERKAGGILAERAGDAAVVVGIGLNVSLREEELPVPAAGSLALANAVSLDRDTLLRSVLRSLERWYGDWREAGGDPAASGLQEAYAAGCATLGRTVRALLPGERELVGEAVAVDGDGRLVVATEEAGRVPVGAGDVIHLR
>NZ_CP050177.1|WP_167028062.1|2882556_2884143_+|acyl-CoA-carboxylase-subunit-beta
MSEPETAHTTAGKIADLQHRIEEATHAGSARAVEKQHAKGKLTARERVGLLLDEGSFVELDEFARHRSTAFGIEKNRPYGDGVVTGYGTVEGRPVCVYSQDFTIFGGSLGEVYGEKIVKVMDFALKTGCPIIGINDGGGARIQEGVVALGLFAEIFRRNVHASGVVPQISLIVGPCAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNTTSGVAHHMAGDEKDAIEYVKSLLSYLPSNNLSEPPAFPEQAALETTDEDRELDTLIPDSANQPYDMHLVVEHVLDDGEFLETQALFAPNIITGFGRVEGYPVGIVANQPMQFAGCLDINASEKAARFVRTCDAFNVPVLTFVDVPGFLPGLDQEYGGIIRRGAKLIYAYAEATVPLITVITRKAFGGAYDVMGSKHLGADLNLAWPTAQIAVMGAQGAVNILHRRTIAAAGDEDAQDAARAGLIQEYEDALLNPYVAAERGYVDAVIMPSDTRAHLVKGLRQLRTKRESLPPKKHGNIPL
>NZ_CP050177.1|WP_167036655.1|2884201_2884405_+|acyl-CoA-carboxylase-subunit-epsilon
MIKVIRGNPTPEELAAALTVVQARVRASGAEAGPPEPPAAWSAPGRVLRDRLPEPGPRSWARTYWPG
>NZ_CP050177.1|WP_167028065.1|2884686_2885292_+|septum-formation-inhibitor-Maf
MTAPRRRLVLASASPARLSLLRQAGLAPEVIVSGVDEDALSAPTPAALALLLAEAKATAVAGLPGTAGALVVGCDSVLDLDGEALGKPADAEEATTRWKSMRGREGILRTGHCVIDTVTGRRASETASTTVRFGTPSDAEIAAYVATGEPLHVAGSFTLDGRSAPFVDSIEGSHGNVIGLSLPLLRRLLAEHGVPITDLWV
>NZ_CP050177.1|WP_167028068.1|2886110_2887862_+|biotin/lipoyl-binding-protein
MRKVLIANRGEIAVRVARACRDAGIASVAVYADPDRDALHVRAADEAFALGGDTPATSYLDMAKVLGAAKDSGADAVHPGYGFLSENAEFAQAVLDAGLTWIGPPPQAIRDLGDKVAARHIAQRAGAPLVAGTPDPVSGSDEVVAFAKENGLPIAIKAAFGGGGRGLKVARTLEEIPELYDSAVREAVAAFGRGECFVERYLDKPRHVETQCLADTHGNVVVVSTRDCSLQRRHQKLVEEAPAPFLSEAQNAELYAASKAILKEAGYVGAGTVEFLVGADGTISFLEVNTRLQVEHPVTEEVTGIDLVREMFRIADGEELGYGDPAVRGHSFEFRINGEDPGRGFLPAPGTVTTFAPPTGPGVRLDAGVESGSVIGPAWDSLLAKLVITGATREQALQRAARALAEFDVQGMATAIPFHRAVVADPAFTADPFTIHTRWIETEFVNTIPPFAVPSDGDEDESGRETIVVEVGGKRLEVSLPTSLGMTLARTGLAAGARPKRRATKKSGPAASGDSLASPMQGTIVKVAVEEGQEVKEGELIVVLEAMKMEQPLNAHRSGTVKSLNATVGSSVTSGALICEIKD
>NZ_CP050177.1|WP_167028071.1|2887952_2888930_-|DeoR/GlpR-transcriptional-regulator
MFAAERRQLILEMVRANGAVSLRELARVVQTSEVTVRRDVRALEAEGLLDRRHGGAVLPGGFTRESGFPQKSHLATAEKTAIADLAASLVEEGEAVVVGAGTTTQELARRLARIPGLTVVTNSLLVAQALAHANRVEVVMTGGTLRGSNYALVGSGAEQSLQGLRVSRAFLSGSGLTAERGLSTSNMLSASVDRALVQAAAEVVVLADHTKLGTDTMFQTVPTDLISRLVTDEPPAHDDRAGTELQALADQGVQITVAGTGPAGAGAPAGDGVPSGGRPRRDVPLPGQRRTRPAPPAGPQLRSAPTSLTDPQPTDRPRVADLRRR
>NZ_CP050177.1|WP_167028074.1|2889084_2890524_-|NAD(P)H-quinone-dehydrogenase
MTRIVIIGGGPGGYEAALVGAQLGAEVTVVDCDGLGGASVLTDCVPSKTLIATAEVMTSFDSSYEELGIIVADDTPPLEQKARVVGVDLGKVNRRVKRLALAQSHDITASVTRAGARVMRGRGRLDGRQAVDGSRQVVVTAADGSEESLTADAVLIATGAHPREIPDAQPDGERILNWTQVYDLEELPEELIVVGSGVTGAEFAGAYQALGSRVTLVSSRDRVLPGEDPDAAAVLEDVFRRRGMNVMSRSRAEAVKRVGDRVEVSLADGRVISGTHCLMAVGAIPNTRGMGLQEAGVVVKDSGHIKTDRVSRTSAPGVYAAGDVTGIFALASVAAMQGRIAMYHFLGDAVAPLNLKTVSSNVFTDPEIATVGYSQSDVDSGKIEARVVKLPLLRNPRAKMQGIRDGFVKIFARPGTGIVVGGVVVAPRASELIHPIAVAVDNSLTVEQIANTFTVYPSLSGSIAEVARQLHTKRAAEEA
>NZ_CP050177.1|WP_167028077.1|2890744_2891182_+|gamma-glutamylcyclotransferase
MSLYAAYAGNLDARLMSRRAPHSPLRGTGWLNGWRLTFGGEQMGWEGALATIVEAPRSQVFVALYDIAPMDEDSMDRWEGVGLDIYRRMRVRVDTLDGEEPTWVYVLNGYEGGLPSARYLGELADAADSAGAPHDYVMELRKRPC

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Crispr_ID: NZ_CP050177_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_14

3373447-3373535

Orphan

Consensus_repeat	Method
TGTCCTCAATCGCCGGACGGGCTTGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_14

>merge|NZ_CP050177|14|3373447-3373535|CRISPRCasFinder
TGTCCTCAATCGCCGGACGGGCTTGATGTGGCTCGCCCCCGGTGCCGGGTGCGGGTCAAAGATGTCCTCAAACGCCGGACGGGCTTGAT

>NZ_CP050177|14|10|3373447-3373535|CRISPRCasFinder
TGTCCTCAATCGCCGGACGGGCTTGAT	GTGGCTCGCCCCCGGTGCCGGGTGCGGGTCAAAGA
TGTCCTCAAACGCCGGACGGGCTTGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167029124.1\|3365095_3365446_-\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|227324
NZ_CP050177.1\|WP_167029148.1\|3377117_3378269_-\|beta-ketoacyl-ACP-synthase-3	unknown	unknown	gnl\|CDD\|236475
NZ_CP050177.1\|WP_167029136.1\|3371480_3372416_-\|Ppx/GppA-family-phosphatase	unknown	unknown	gnl\|CDD\|223326
NZ_CP050177.1\|WP_167029121.1\|3363535_3364300_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP050177.1\|WP_167036782.1\|3370585_3371449_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP050177.1\|WP_167029163.1\|3385153_3386431_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234893
NZ_CP050177.1\|WP_167029130.1\|3367985_3369836_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_CP050177.1\|WP_167029154.1\|3380384_3382391_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173839
NZ_CP050177.1\|WP_167029157.1\|3382387_3383404_-\|acyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|214838
NZ_CP050177.1\|WP_167029118.1\|3362157_3363303_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP050177.1\|WP_167029142.1\|3375595_3376870_-\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	unknown	unknown	gnl\|CDD\|238430
NZ_CP050177.1\|WP_167036786.1\|3378265_3379165_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP050177.1\|WP_167029140.1\|3373682_3375518_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP050177.1\|WP_167029160.1\|3383854_3385171_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369260
NZ_CP050177.1\|WP_167029133.1\|3369971_3370589_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380054
NZ_CP050177.1\|WP_167036779.1\|3364372_3364837_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029145.1\|3376866_3377145_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|376348
NZ_CP050177.1\|WP_167029138.1\|3372455_3373412_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029151.1\|3379323_3380388_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|238426
NZ_CP050177.1\|WP_167029127.1\|3365572_3367870_+\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167029145.1\|3376866_3377145_-\|acyl-carrier-protein	gnl\|CDD\|376348	pfam00550, PP-binding, Phosphopantetheine attachment site. A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of the anguibactin system regulator AngR has the attachment serine replaced by an alanine.	7.62318e-08
NZ_CP050177.1\|WP_167029148.1\|3377117_3378269_-\|beta-ketoacyl-ACP-synthase-3	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	2.53149e-133
NZ_CP050177.1\|WP_167029136.1\|3371480_3372416_-\|Ppx/GppA-family-phosphatase	gnl\|CDD\|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	1.88148e-81
NZ_CP050177.1\|WP_167029121.1\|3363535_3364300_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.65509e-21
NZ_CP050177.1\|WP_167036782.1\|3370585_3371449_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	8.11573e-30
NZ_CP050177.1\|WP_167029163.1\|3385153_3386431_-\|hypothetical-protein	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	4.97711e-13
NZ_CP050177.1\|WP_167029130.1\|3367985_3369836_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP050177.1\|WP_167029154.1\|3380384_3382391_-\|hypothetical-protein	gnl\|CDD\|173839	cd01150, AXO, Peroxisomal acyl-CoA oxidase. Peroxisomal acyl-CoA oxidases (AXO) catalyze the first set in the peroxisomal fatty acid beta-oxidation, the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. In a second oxidative half-reaction, the reduced FAD is reoxidized by molecular oxygen. AXO is generally a homodimer, but it has been reported to form a different type of oligomer in yeast. There are several subtypes of AXO's, based on substrate specificity. Palmitoyl-CoA oxidase acts on straight-chain fatty acids and prostanoids; whereas, the closely related Trihydroxycoprostanoly-CoA oxidase has the greatest activity for 2-methyl branched side chains of bile precursors. Pristanoyl-CoA oxidase, acts on 2-methyl branched fatty acids. AXO has an additional domain, C-terminal to the region with similarity to acyl-CoA dehydrogenases, which is included in this alignment.	2.50554e-35
NZ_CP050177.1\|WP_167029118.1\|3362157_3363303_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	6.25973e-56
NZ_CP050177.1\|WP_167029142.1\|3375595_3376870_-\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	gnl\|CDD\|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	1.48593e-154
NZ_CP050177.1\|WP_167036786.1\|3378265_3379165_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.24517e-67
NZ_CP050177.1\|WP_167029140.1\|3373682_3375518_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.59364e-06
NZ_CP050177.1\|WP_167029160.1\|3383854_3385171_+\|hypothetical-protein	gnl\|CDD\|369260	pfam07201, HrpJ, HrpJ-like domain. This family represents a conserved region approximately 200 residues long within a number of bacterial hypersensitivity response secretion protein HrpJ and similar proteins. HrpJ forms part of a type III secretion system through which, in phytopathogenic bacterial species, virulence factors are thought to be delivered to plant cells. This family also includes the InvE invasion protein from Salmonella. This protein is involved in host parasite interactions and mutations in the InvE gene render Salmonella typhimurium non-invasive. InvE S. typhimurium mutants fail to elicit a rapid Ca2+ increase in cultured cells, an important event in the infection procedure and internalisation of S. typhimurium into epithelial cells. This family includes bacterial SepL and SsaL proteins. SepL plays an essential role in the infection process of enterohemorrhagic Escherichia coli and is thought to be responsible for the secretion of EspA, EspD, and EspB. SsaL of Salmonella typhimurium is thought to be a component of the type III secretion system.	0.00427656
NZ_CP050177.1\|WP_167029133.1\|3369971_3370589_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380054	pfam17920, TetR_C_16, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. This entry represents the C-terminal domain found in a number of different TetR transcription regulator proteins found in Actinobacteria. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain.	5.82232e-35
NZ_CP050177.1\|WP_167029157.1\|3382387_3383404_-\|acyltransferase-domain-containing-protein	gnl\|CDD\|214838	smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes.	1.96458e-23
NZ_CP050177.1\|WP_167029124.1\|3365095_3365446_-\|SH3-domain-containing-protein	gnl\|CDD\|227324	COG4991, COG4991, Uncharacterized protein with a bacterial SH3 domain homologue [Function unknown].	1.72921e-09
NZ_CP050177.1\|WP_167029151.1\|3379323_3380388_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|238426	cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.	5.58957e-109
NZ_CP050177.1\|WP_167029127.1\|3365572_3367870_+\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.86328e-84

>NZ_CP050177.1|WP_167029138.1|3372455_3373412_+|hypothetical-protein
MPKTKKAKPGKATVKVRDTVSAENARTASETHPDTKYQQLEAHTDPAGERGADGGVRRGVPDDDEKGIDFARAWVEFPDPADEDQVFRCDLTWLTSRWSCVFGSGCQGIQAGRADDGCCTLGAHFSDKDDEKRVAKHVARLTPEQWQFHEEGTAGGGWTQTDEDGERQTRRWNGSCIFQNRPGFAGGAGCSLHILALSEGREPLETKPDVCWQLPVRRTYDWIERPDDTKVLQVSIGEYDRRGWGSGGHDLHWWCTSATSAHGAGEPVFRTYGPELTEMMGAEGYAELVALCERRLASELPLVAPHPADPSPAGGPRV
>NZ_CP050177.1|WP_167029136.1|3371480_3372416_-|Ppx/GppA-family-phosphatase
MRLGVLDVGSNTVHLLAVDAHRGARPLPAYSHKAELRLAELLDADGAIGPVGLDRLVTTVAGALQAAEDKGCEDVLAFATSAVREASNADLVLGRVKAETGVDLDVLTGREEARLTFLAARRWFGWSAGKLLVLDIGGGSLEIAFGLDEEPDATVSLPLGAGRLTAGWLPGDPPDPQDVRALRRHVRAEIARTVGEFARFGKPDHVVATSKTFRQLARIAGAARSADGLYVQRELSRSSLEEWVPKLAGMTTLRRAALPGVSDGRSAQLLAGALVAEGAMDLLGVEVLEICPWALREGVILNRLDHLPTTR
>NZ_CP050177.1|WP_167036782.1|3370585_3371449_-|sugar-phosphate-isomerase/epimerase
MVRIPDAKVALSTASVYPESTATAFEIAARLGYDGVEVMVWTDPVSQDIEALRRLSDHHGVPILAVHAPCLLITQRVWSTDPWVKLQRARAAAEKLGASTVVVHPPFRWQRQYARDFVEGIWRMADETDVRFAVENMYPWRYRDREMLAYAPDWDVTKDDYRHFTLDLSHTATARNDALEMAGRMGDRLGHVHLADGNGSAKDEHLVPGRGSQPCAALLEGLAGSAFDGHVVIEVNTRRAMSAAEREADLAEALAFTRLHLASSATGTGSPSAAPGTPSSSAGARRP
>NZ_CP050177.1|WP_167029133.1|3369971_3370589_-|TetR/AcrR-family-transcriptional-regulator
MTDTVPRRRGRPARDASETGPGTREKILAVARTEFAESGYDKTSVRGIAKAAGVDPALVHHYFGTKDEVFAAAVEVSFEPALLLPQLLAGGAEGLGERLARFFLGVWENPVSRAPLLAIVRSALTHEAAAKILRTFVLQRLLERIAEELDVPDPTFRAELAASQMVGIMVLRYVIQAEPLASVPTEEIVAMVAPTLQRYLTDAEA
>NZ_CP050177.1|WP_167029130.1|3367985_3369836_-|dihydroxy-acid-dehydratase
MPELRSRTVTHGRNMAGARALMRASGVASADIGKPIIAVANSFTEFVPGHTHLAPVGRIVSEAIKAAGAVPREFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVEAHCADALICISNCDKITPGMLNAALRLNIPTVFVSGGPMEAGRATLVDGTVRKLDLINAISDAVNESVSDEDILRIEENACPTCGSCSGMFTANSMNCLTEAMGLSLPGNGSVLATHTARKALYENAGRTVVEITKRYYEQDDASVLPRAVATRAAFDNAMALDIAMGGSTNTILHLLAAAQEAELDYDLADIDAVSRRVPCLAKVAPNVAPGGTYYMEDVHRAGGIPAILGELYRGGLLHEDVHTVHAPSIKEWLETWDVRGGSPSEEAVELWHAAPGCVRSAEAFSQSERWDTLDTDAAGGCIRDVAHAYSADGGLAVLKGNLAVDGCVVKTAGVDESIWTFEGPAVVCESQDQAVEKILRKEIAEGDVIVIRYEGPRGGPGMQEMLYPTSYLKGRGLGKACALVTDGRFSGGTSGLSIGHASPEAASGGTIALVHDGDRIRIDIPNRSIELLVPDEELETRRETLGGVYAPVGRERKVSAALRAYAAMATSADKGAVRDVSRLG
>NZ_CP050177.1|WP_167029127.1|3365572_3367870_+|PQQ-binding-like-beta-propeller-repeat-protein
MPPLRNTGQAPEAERPEYAGRYLLESDLGSGGMGAVHLATSASGLRLAVKIIHSNHASDPEFRARFRQEIAAARRVSGAFTAPVVDADPEAERPWMATLFIDGPTLSERVKRSGPLGTDELIQLGAGLAEGLRDIHRAGVVHRDLKPSNVLLAADGPKVIDFGISRPSDSDLHTETGRLIGTPPFMAPEQFQRPREVGPAADVFAMGAVLVHAATGRGPFDSDSPYIVAYQVVHDEPDLSGVPEGLLPLIARCLAKEPADRPTPDELMAALRTDARGVDRRGADATRGTVTALVPPSRAHRTGGGDPTPTTHPKAGRSRAGRPWTVLSLTRRRPRARWAAIGVVLAVVTGAGLVGMHAAGDGTGAAPAKARADRVGAAGREFRPWDLQLRGGTGENRMSVCTADGTGVYCAAPGIKAARLDPVNGRLAWSSGDTATAKTGVGGAAPFLSGGLLHVITANGGRLEALDPASGKKRWGADLSAYPVVRHAGDSVLLVSPGGVVRSLDSATGRERWKASRGGPGSLWVATPATPATPATAAAAARATTAATPADGDKNRAGAGGELFAVSGSSDGTSTQVTSVDPATGATRWEQRITGTLTPVSASDGALYLLAGDLDSMTVGVVRLDTATRDVRRVPLSSPLDQAQATVDGGTVYLIGYSGSLVAVDTGGKGGSGAAERWRLETSVAWTSAPVVLDGRLYLSAGDGRLLAVDARRGVLVGETKPRMDDGRHTFTATLAAPVAVPGRVYASAPDGSVFAVDSRDPSRW
>NZ_CP050177.1|WP_167029124.1|3365095_3365446_-|SH3-domain-containing-protein
MSVEEAENTPVAAEPSAKASAEVAADLAVTTLAAAKRYPIAPGYQVNVRSGPGTNYQIVRVLAYGTSVPINCQKPGEWISGPYGTSNLWDCIANGQFVSDAYVHTGSDGYVAPHCS
>NZ_CP050177.1|WP_167036779.1|3364372_3364837_-|hypothetical-protein
MPLFGTTWLRHDGGYGLRRAGASVGSLSAAVAACFVLRFAYQGLEIAGVGGFLDAVVVVMFAVCGAIAFRRTWEGFSRRPADPEGDASLRSLKMIGFVGSLLAYFVRSLTEAPGEGLRRREYETAVTEYERRRAARTGNPASRATPKTRRPKRR
>NZ_CP050177.1|WP_167029121.1|3363535_3364300_-|class-I-SAM-dependent-methyltransferase
MTERALSFDAVAEQYDTARPGYPPALFDTIETLTGRPLRGSRVVDVGAGTGIATRLLRERGADVVAVEPGPGMAARLRLSAPDVPLVRGFGDALPLADAAADLVTYAQAWHWTDPARSLPEAMRVLRPGGALALWWNVSDRAVPWIAEQEARLREDAGGPAHGAHGTGTRDRHLPTDPRTVERRIPWSRRVPLDTHLDNLGSHSVFRVLGDRATTAFLTRERAELLRLFPDGTVEESYVVELTLTYRPTGPSTP
>NZ_CP050177.1|WP_167029118.1|3362157_3363303_-|FAD-dependent-oxidoreductase
MTPPRTPDKNLPSTHHVVVLGAGYGGLMTALRLAPHTRVTLVDPAGHFTERVRLHERASGRPDVTHPLDGFLHGTGIIHVAARATRLDLAAREVHTDNGQVLHYDRLVHALGSRTAPAPTPVEGTPSNGGRAYTTESAAELHKRLLEGPGTLAVVGGGLTGVELATELAESHPGWRIGLHTEGIVGASLSNRGRAHVRTALAARGVRTEEGHRVASPDAVDADVVLWAASMVPATGLATAAGIAVDRAGRITVDTALRSVSHPEVYAVGDSAAAHTEAAGPLRMACATALPTGAHAAVAITADLRGEEPPPLRFGYLLQCVSLGRQDGVIQPVRADDSPRARILTGRPAAYVKEQIVLSTVRMLHLASRHPSALRYVPGIG
>NZ_CP050177.1|WP_167029140.1|3373682_3375518_-|hypothetical-protein
MTSSSPETSPHTTGAHRAPRRAPRSPERRPPVRYEPYLDGLFTYCLSVLCDHDAATEVLGDVLALSERQFGRSPSDAGERKAWLYALARWACLRKLTAQRRKRQGAHSPHREPEPTRGAPGNAGAPVRGSGAGASAAYSAPAAYSAADPVPAAAAEERRRHELAQLAWPEAAGTTPEQREILELAVRHQLGPHEVAAVLSMELTAARELLASAACEVERTRAALAVVETGSCPSVARLTGDHQVLLSATLRRELVRHVDDCPLCRRVAERAEASAPWPGSRTTPSARTRTSPAVLPLVEAPRAAAYTAMIRAPRGRASAPRFGRNGFPMDPKDRAARRDRLRARAVTTTVVATVVAAPVLALWAAYRGGPQAGEGQDGPSISARDGEGRPDDEGGAYERYENAGNAQVRAEEGFGPAGPGGAGGRGGPGGRTPDVSVEVISDGPPPPPARPGQPAPGRLAVEARSYGGATTLTLRAYGGTPVTWSAGTSARWLRLSSSSGTLAPGDSITLRVLIVERYEPAGAWSARVLLHPSGAVVKLDGYGRTPPRPTHPSPTHPTDPPPSTPPPTTPPPSSDPPTPPPSPDPPTDPPPSNPPPTSENPTPPDPSPTPT
>NZ_CP050177.1|WP_167029142.1|3375595_3376870_-|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein
MTGHAATRRTEPLAVTGIGLVTPAGLGTRATWDRVCAGVPTAAADPELAGLPVPFSCRVPGFDPRVHVGVRQAWRLDRATQFAITAAREAVADAGLDPLSWDGRRVAVVMGSAAGGVTTYESQHSRLLRTGPRSVSPLTLPAFLPNMAAGQTAIALDARGPALHTSTACASGATALIVAAMLLREGACDIAVAGGTDAMVTPLCVTAFSQMGALSGRAAEPAAASRPFDADRDGFVIAEGAGVLVLERAGQAAARRAPVHALFVGHGSTTDAHDPVAPHPEGRGLREAFLRALATAGAGPADVDHINAHGTSTPLNDAREAGVLRRLFGARPPTVTSTKGVIGHPMGAAGSIEAALTALTVSHQLAPPTANFRRPDSGTGGLDLVTGGVHKHPVRLALSASAGFGGHNTVLAFRPPESSIPVPF
>NZ_CP050177.1|WP_167029145.1|3376866_3377145_-|acyl-carrier-protein
MEAVSQYLVTLLADKFDVDPDAVKPGSTLAELELDSLAVVELFVTVREQWGVELDDSDSAADLTVEDVARLVADQLPDDSGPVEATDPGTPR
>NZ_CP050177.1|WP_167029148.1|3377117_3378269_-|beta-ketoacyl-ACP-synthase-3
MNTRTPGRAATATAVVCGIGSCLPPRSLTNEEIVARGELATTDAWIRSRTGIARRRHAAPDVSTGDLALAAGEAAMRSAPGVRPDLVLIATTTPDRPCPATAPDVAHRLGLGTVPAFDLAAVCSGFLYALTTANALITQGTCRNPLVIGAEKYSAIVDPRDRDTAPIFGDGAGAFLLRPGDRDEPGALVAADLGADGAGSDLIAVAGGGSRLPDTAGLDRDERYFRMRGRQVYARAVTHMTRSAHSALDRAGWPAPSIEAFIGHQANQRILDSVAERLGVPAHHRFGNIADVGNTAAASIPLALADTAARRLVRPGARALLTAFGGGLTWGAIALTWPAVLPHTAAPAPRPPSHTLTDVPPDALTDALTNRSPQPWKLSASTS
>NZ_CP050177.1|WP_167036786.1|3378265_3379165_-|SDR-family-oxidoreductase
MSTFRVDGARALVTGASRGIGRAVARALAEAGADVALSARTGDALKETASLVQDQGRTAVLVPGDLADTARAAHVVDQAAHALGGLDIVVHNAGVLPMEEDGSPVVLPLQESFQRDWDSVLHVNLGATAAVCRAAHPHLAASPRASLVLMSSVAGVVGAPRMEAYAASKAAQISLVRSLATGWARQGIRVNALCPGWTRTDMTAFAYGSGPLSDWLMGHVPLGRWAEVTDVAAATLYLASPASAYLTGHALVLDGGMSVPDGGLAGTPKPPSPFVAPAPAPVPAPSPHAGPLAAADAAR
>NZ_CP050177.1|WP_167029151.1|3379323_3380388_-|ketoacyl-ACP-synthase-III
MSARTEPAIGILGMGAHLPARRRDNEEVARSTGVTPQWIAERTGVRVRHVAAPDEAASDLAAAAVRAAADAAGIRTDEIGVLVSATSTPDELGPSTACRVQALTGAHHAVALDVSAACSGWLFAAKVAHDWLRGDPRVRYAAVVGVEAYSKFLDLTDRGTAVLFADGAAAAILGPVRQGRGFREFRLGSDGRGAHHVLIPAGGSRRPATAATLDSGAHFIHMDGRAVRDFIVDVFPRLVEETLKRNDLVLDDIDAFVVHQPNPVLLRRLGAEMGIPPGRLVVVGDQVGNIGAASAPYALATAAARGLVPDGGRVLITVFGAGLTWGSALLDWTGAPGAGIPTAPLPTDRRRSHQ
>NZ_CP050177.1|WP_167029154.1|3380384_3382391_-|hypothetical-protein
MNPPVTAPTPAHATTPEASDASGAAEAPEAREIPEAALAELTRLTGTACPPDLRERIVTALAGGPAPLPAEAGLSDDHAVHLRLRRLAESLPGLQEVFSDTELLAEVGACVGAADPSLYMAALSHYILCAGSVLTLSGGDRPAPALARLEGARARGVFMVTEIGDASSHLAIRTTATFDPERREFVLHTPDARAAKFSAVAVLGLPQTAVVCARVLTGGRDAGVFSFAVELSDDDGVLVPGVHISAPLSAHALPLAYAVVRFDQVRVPYADWLRDSADLDADGIPHDPLGTPDARLRRTLSVGQALWATLPTAMAAMARGAAVTTLRHSAHRRSHGRLAPGAPVLTYRTQQHAVLGAVAEAFALSCTAATARDTWRAAHRPPEGTGALPARARAGARMTFAPWSAVDRPLAAYKAFTVRETARLAASCQHRSGLAGFLDVNRLQSWQGFAHAFDSAGGDSTLIMLDTGRALATDDAPADPEPGPGTPHHALSPADPAWWPAVTRALQRRLTADLRGALRARTEQGLEGLELWNPLLGRAQRLGEVYAHRLAAENLTAVVDAAEEPEVKQALPPLAALYGLLQAERLSGVLQSAGVLDASTVTALPALTDDRCDELTPHLPLLARAMALPDRLAPAPLGADAYAAALVEETAVRTNGTPDPATDRGRTT
>NZ_CP050177.1|WP_167029157.1|3382387_3383404_-|acyltransferase-domain-containing-protein
MPASSRDTVPRATLHLFPGQGDFALTPLVKGLRAHRPLRDAVTGVFEDIDRVAVEHGLAPLGPRLVSDAPPSGRELAEGPPGTAQLALFGASLSVHRALCAAGQAPERLLAVSFGEIPALVAACCFTVADGARIALRLGQLLHHCPGGLTLLGAGEEAAHALLRTAGVALGPARARVVVGCVNDSRETVLAGPLPALERVERLARARALPATRLRLPFLSHHPSLGRTATAFAAFVRTLPARPPRLPVHSAVAQGVHGPGTDLPAALAHCLTRPARLPGTLRRAAPGPVLLLEAGTGGALTRNARHILPGALARAPLVDPDFRWSAPPVPVSHPGAVG
>NZ_CP050177.1|WP_167029160.1|3383854_3385171_+|hypothetical-protein
MARRPPNGMFRDLLAETGWTGEELARAVNRLGAESGLTLRYQRASVSQWAAGIRPRPPAPELLAEAFSRRLGRRVTVADVLPPAAAGGGSAAESPTPARQLVDLGRRVAQRYRAAAALVYEHDPRPSPPAPHPLPQAVPQRLTPAATAAVAAMIDVFSTADRTHGGGFARVALAAYLSQSVAPLLRAPGPSPLRRQLLLSGATLSYLCAFMHFDDELHGPAQRYYRTSLELAEAAGDPTAQALALRALSIQAHALKHHRRALDLAEEAHRRVTARTPPQVRAGILGQLAVAEAATGSGPASTRRLDQAARELESADRNEPAVGAYHGASLAHQHATVAAHLGDGSRAVSALQASLDRRPDSEPRSRVITCAALAELHFARGHLEAACATWHAFLDGYPAVSSARADTALATMRSLTRVHRRQPTALALIHRAASLQRR
>NZ_CP050177.1|WP_167029163.1|3385153_3386431_-|hypothetical-protein
MNRTLVYERWAAEAVRPGRLTVAVSAVHPVRGPVRCPAAPLVAAELERLGHPTGLGALLLGPPVVRPPRRGGAAGSGSAVVFAATYVDVDGTVAGVAVAGGPDLGADVLEAAERSVREWAALFRTRRVLVAETAGTCAGTEGAAASCAAAARARETVAEFLRRGDTVVRIGSGGPGGGGGGGGGGAAELGAGDGAGDGAGEGAGPGAEPGAGEGVGPGAGGGAGEGGGDGAGDGPGDGAGDGPGRLVAFDAGRPVERQLARLRAVADPDRVSFAVRPCTPVDDVVPVVAALREAFPRLRGQHPDQWCYRSADRRDAVRALAAASDVVLLLGRPDPDLLAGPPGPAAVRPVAAVRDVRRAWLAGSATVGVAAGPETPAGLLAGVTEALSGLGPYSVVRQESRRRVVVRPGGTGHLPHQAGRSAALQ

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Crispr_ID: NZ_CP050177_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_15

3550798-3550975

Orphan

Consensus_repeat	Method
CGTCGGACACCACGACCCCGACCACCGGCACCCCCGCAACCGG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP050177_15

>merge|NZ_CP050177|15|3550798-3550975|PILER-CR
CGTCGGACGCCACGACCCCGGCGACCGTCACCCAGGCCTCGGGCACGACGAACGCGGCTCCTCCGACCACCGGCACCCCCGCAACCGGCACCGGCGAGAGCGTTACTCCAGCGACGGGCTCCGCGGCCACGGGCACGTCGGACACCACGACCCCGATCACCGGCACCCCCGCCACGGG

>NZ_CP050177|15|4|3550798-3550975|PILER-CR
CGTCGGACGCCACGACCCCGGCGACCGTCACCCAGGCCTCGGG	CACGACGAACGCGGCTCCTCCGACCACCG
GCACCCCCGCAACCGGCACCGGCGAGAGCGTTACTCCAGCGAC	GGGCTCCGCGGCCACGGGCACGTCGGACACCACGACCCCGATCACCG
GCACCCCCGCCACGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167029506.1\|3537354_3540078_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|163057
NZ_CP050177.1\|WP_167029511.1\|3541002_3541296_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274862
NZ_CP050177.1\|WP_167036847.1\|3574747_3575323_-\|SigE-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|132028
NZ_CP050177.1\|WP_167029520.1\|3546184_3546904_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029503.1\|3535999_3537358_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378057
NZ_CP050177.1\|WP_167029523.1\|3548962_3549649_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236766
NZ_CP050177.1\|WP_167029497.1\|3535243_3535603_+\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|377587
NZ_CP050177.1\|WP_167029500.1\|3535614_3535935_+\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|274862
NZ_CP050177.1\|WP_167029517.1\|3541804_3545989_+\|type-VII-secretion-protein-EccCa	unknown	unknown	gnl\|CDD\|274858
NZ_CP050177.1\|WP_167029531.1\|3564830_3566552_-\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237029
NZ_CP050177.1\|WP_167029529.1\|3551843_3564773_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP050177.1\|WP_167029545.1\|3573446_3574751_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029509.1\|3540100_3540850_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029540.1\|3570527_3572336_+\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP050177.1\|WP_167036843.1\|3567434_3569315_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP050177.1\|WP_167029548.1\|3575847_3576906_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237845
NZ_CP050177.1\|WP_167029514.1\|3541359_3541797_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029534.1\|3566830_3567433_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP050177.1\|WP_167029542.1\|3572602_3573367_+\|SURF1-family-protein	unknown	unknown	gnl\|CDD\|119401
NZ_CP050177.1\|WP_167029537.1\|3569605_3570307_-\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|213983

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167029506.1\|3537354_3540078_+\|AAA-family-ATPase	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	5.68152e-84
NZ_CP050177.1\|WP_167029511.1\|3541002_3541296_+\|hypothetical-protein	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	0.000420943
NZ_CP050177.1\|WP_167036847.1\|3574747_3575323_-\|SigE-family-RNA-polymerase-sigma-factor	gnl\|CDD\|132028	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family. This group of similar sigma-70 factors includes the sigE factor from Streptomyces coelicolor. The family appears to include a paralagous expansion in the Streptomycetes lineage, while related Actinomycetales have at most two representatives.	2.65357e-51
NZ_CP050177.1\|WP_167029503.1\|3535999_3537358_+\|hypothetical-protein	gnl\|CDD\|378057	pfam08817, YukD, WXG100 protein secretion system (Wss), protein YukD. The YukD protein family members participate in the formation of a translocon required for the secretion of WXG100 proteins (pfam06013) in monoderm bacteria, with the WXG100 protein secretion system (Wss). Like the cytoplasmic protein EsaC in Staphylococcus aureus, YukD was hypothesized to play a role of a chaperone. YukD adopts a ubiquitin-like fold. Usually, ubiquitin covalently binds to protein and flags them for protein degradation, however conjugation assays have indicated that the classical YukD lacks the capacity for covalent bond formation with other proteins. In contrast to the situation in firmicutes, YukD-like proteins in actinobacteria are often fused to a transporter involved in the ESAT-6/ESX/Wss secretion pathway. Members of the YukD family are also associated in gene neighborhoods with other enzymatic members of the ubiquitin signaling and degradation pathway such as the E1, E2 and E3 trienzyme complex that catalyze ubiquitin transfer to substrates, and the JAB family metallopeptidases that are involved in its release. This suggests that a subset of the YukD family in bacteria are conjugated and released from proteins as in the eukaryotic ubiquitin-mediated signaling and degradation pathway.	3.32508e-14
NZ_CP050177.1\|WP_167029523.1\|3548962_3549649_-\|hypothetical-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	0.00291633
NZ_CP050177.1\|WP_167029497.1\|3535243_3535603_+\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|377587	pfam06013, WXG100, Proteins of 100 residues with WXG. ESAT-6 is a small protein appears to be of fundamental importance in virulence and protective immunity in Mycobacterium tuberculosis. homologs have been detected in other Gram-positive bacterial species. It may represent a novel secretion system potentially driven by the pfam01580 domains in the YukA-like proteins.	2.05122e-11
NZ_CP050177.1\|WP_167029500.1\|3535614_3535935_+\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	1.9124e-05
NZ_CP050177.1\|WP_167029517.1\|3541804_3545989_+\|type-VII-secretion-protein-EccCa	gnl\|CDD\|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP050177.1\|WP_167029531.1\|3564830_3566552_-\|methionine--tRNA-ligase	gnl\|CDD\|237029	PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed.	0
NZ_CP050177.1\|WP_167029529.1\|3551843_3564773_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	3.56622e-19
NZ_CP050177.1\|WP_167029548.1\|3575847_3576906_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	6.89548e-137
NZ_CP050177.1\|WP_167029540.1\|3570527_3572336_+\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	1.7758e-52
NZ_CP050177.1\|WP_167036843.1\|3567434_3569315_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.61172e-80
NZ_CP050177.1\|WP_167029534.1\|3566830_3567433_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	1.60367e-05
NZ_CP050177.1\|WP_167029542.1\|3572602_3573367_+\|SURF1-family-protein	gnl\|CDD\|119401	cd06662, SURF1, SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis of the mitochondrially-encoded Cox1 subunit of cytochrome c oxidase (complex IV). Cytochrome c oxidase (complex IV), the terminal electron-transferring complex of the respiratory chain, is an assemblage of nuclear and mitochondrially-encoded subunits. Its assembly is mediated by nuclear encoded assembly factors, one of which is Surf1/Shy1. Mutations in human Surf1 are a major cause of Leigh syndrome, a severe neurodegenerative disorder.	1.09195e-29
NZ_CP050177.1\|WP_167029537.1\|3569605_3570307_-\|hemerythrin-domain-containing-protein	gnl\|CDD\|213983	cd12108, Hr-like, Hemerythrin-like domain. Hemerythrin (Hr) like domains have the same four alpha helix bundle and a similar, but slightly different active site structure than hemerythrin. They are non-heme diiron binding proteins mainly found in bacteria and eukaryotes. Like Hr, they may be involved in oxygen transport or like human FBXL5 (F-box and leucine-rich repeat protein 5), a member of this group, play a role in cellular iron homeostasis.	8.15611e-12

>NZ_CP050177.1|WP_167029523.1|3548962_3549649_-|hypothetical-protein
MGAAFAAVRPAGSPCGRSRIVAGRAAEPGRAPVEEAAVGVDVDVPTSPVAPAGRVPVGAAEASPPVGADPERLAPEGVVTGASVVEAPTEDPAVPAVRVPESVRVPVGASVRVPVPASLRDGVAVSAPVPVGASVRVDAAVSVRVPASVRVDAAVSARVPVAVSVRVPVSVRVGVGVSVRVPVAVSTCVAVDVSGASVAVATSVPVVSRDAVPVASAGSPGVPSPRVP
>NZ_CP050177.1|WP_167029520.1|3546184_3546904_-|hypothetical-protein
MPVGVSTRVPGPVRVTPSAGFVRTAGGAVMSVCGAVTVCGEPVRGTFTGSSRGVGRKLPAPSPSGLVPLMFDGPRQSGPNSPPSPAPMPRLIASAFQSTLMSLLPVAQVARAWANTSVPSWIAAPRTALMAKFPTKDSSPRAPTTRLTTDTMKEIASPTTPNSEESRAPRPGSAKLRIRPKIDARPEIISASLMSSIVVSSWFAYDWSDSLTRQAVIADSRTWSATPPLGAPAPPGASA
>NZ_CP050177.1|WP_167029517.1|3541804_3545989_+|type-VII-secretion-protein-EccCa
MTRTAFHRPARTFPPSVPEERISLAAAPQKPANNQASNWLIILLPLLSSVSMAAYMVTFGRPWMILLGVSFVILSVAITVYVRWQSRSTTRQQRLRQRDRYVEYLSGIRAKARASASAQRAVGAFLHPSPRRLWAIAVNRRRVWERRPGDADFLTVRVGLGRGLPQLRIAPGNRNDPTAEFEPLSQRAAEKLTRDYAWVGLQPACVDLARTGVVSLLGTKERTRSTAAALLLQLAVLHAPDDVQLVVLDGDAAAKGDGPREAGTATTDSPWSWVKWLPHTHESDASSSGAGLVPTIAGRLDGVADVLERRLERARAERSERSTVLPSLRNADPGRRCVVVLDGYRPDALWARSSLIAELLAEAGPASGIHVVCLVSKENEEPGRVDVRARLDGGRGLTLESRDPDLLDGVEDIVADEAEPALYEQTARALAPLRLSGERDQVLSRTVSLPDMLGFGDLAAFDPTAFWRAPGDEALLRIPIGVTGSGDDLVLDLKESAQGGIGPHGLVVGATGSGKSELLRTLVTGLTMTHSPEQLGFVLVDFKGGATFAGVTELPHVAGLITNLADDLALVDRMRAALAGEQQRRQRMLRDAGNVDSVREYQMLQAQGGTDTEGRPLEPMPYLMIVVDEFGELLSQRPDFIELFVQIGRVGRSLGMHLLLATQRLDEGRLRGLESHLSYRICLRTFSAAESKAVLGTNDAYKLPPIPGSAYLRVDESVYERFRVAHVSGTYQEPDPEASAEASGPAPTPVLFGLRTAEHARARSEDPDVTRTPAPLPVAGSRTEMQVAVERLRRYGRPVHQVWLPPLPAHIDLDSLLGPVGEDPERGFQAAKWDGIGSLSFPVGVVDLPMRQAQKALLVNLAGAHGHVAVVGAPQSGKSVALRTTLLAAMATHTPDELQFTCVDFGGGGLGPFEAAPHVSGVATRHDETRVRRALAVVRQTVVAREQLFERLNVDSVAGFRRARAEGRLPQDTLAADLVLVIDNWAALRGAVEEAESLVHDIATRGLGVGVHLLLTANRWGEIRTSLRDAIGGRFELRLNETGESEINRKAAKLLSAAAPGRGIAPPGDQIHIALPRLDGAQTMEGLAEAQQAAIAESAARWTGTPAPVLRVLPDRVTPGDLKAAAADQPKASATAVPIGIRESDLGPTSVDLGTGDSHFLVLGDSGSGKTSFLRSWMRGLAERNSPYAIRFITVDYRRGLLDAVPDEYLGAQAANAEHAAAYVEQLAAKLQERMPPAGISSRELRERAWWSGPELYVVVDDYDLAAGQPGARGPLAPLAEYLTHAADIGFHLVLARRVTGVTRALMSDPLISRLHEYGTGGLILSGDPREGALIADQRAARRVPGRGLVVGRRVAPTLVQTVLDPALDPSLDPTLDPSLDSSLDPLATGPDSR
>NZ_CP050177.1|WP_167029514.1|3541359_3541797_+|hypothetical-protein
MASDPNYDASSLYIDPQSIVTSARLLTTYAQDVADAITRINTTLGDLALGWAGETQQEVDLMNQRWTTVMRGLFGTEDSPESGVLNVMAAGAEAVAAGNAQTEVALRDMFKQFGSAIDAPQGSGTPGSAPADRTDLDYTAITADW
>NZ_CP050177.1|WP_167029511.1|3541002_3541296_+|hypothetical-protein
MSWSDFKVALGQLQAAVGSVNGEAGNIAGSMSSISGEFAKIGSAWQSPASMTLQEVQEWFARSSSDLHALLEDVGRRLQVAYDNYHQVETTNTGNLT
>NZ_CP050177.1|WP_167029509.1|3540100_3540850_-|hypothetical-protein
MADDDGIQHSSYDHWQPNPDIQTNPGPDPDRGKDLGYLAPNVHVGWGTTPPSFNNPPPGSPAGSGQAPTADVPETPPIRVNLASMRGAEETMLAAARVATDSYQALRDRVLGMGDSVFGQEAEDPVYGIPYFPGPVDSDIQPFAKEFAATMNPAMEKALYSIGNVLELVGEYIAMVNRAGQTYSEVDRNSRFPTDALGQEVVRSIGNLRFGHGVPPESVPKGIGGDIRFGHAVPPDSVPKGFGPGPVVG
>NZ_CP050177.1|WP_167029506.1|3537354_3540078_+|AAA-family-ATPase
MTRELQRVAARGWGTHRTIASAVRAAADGAVVSVQPGTYTESLVLDRDVTLVAEKGPGTVRLTAAHGPAVSVPAGRVALRELEITGADPAEPAVLVRGGEVELERCEISGGRLELARDARAVVRGCTVRDSRRAGVHVTGTAHGTFEDCVVHTVDGHGITLVDTAGAELRRTRVRHTTACGILLGGTSTAVLDDCDVAHAGDAALLVYAPARPLLRGCRLHDTTAQGVRVEDAPDVPVQRTRAGTAGASATASTAGASDAGAESAGQDERRIRLDGCEIFRTGAEGVLVSGGSEVLLRACEVRETPGAGVLARGLARVELDTVRIVDVPDTALTATEGAELRARACELARSGGNGLLADGTSVVEMVDSSIAATGNCGVRLAGNARLRLADCRVADSAQDGVRVGGSAELVAEHTRVERSALAGVRVDGADAVLRACEVTGAETGVRVATRHRPLLEDCVVTGARRTGIEVGPDTGVLIRGGRVADTGSAGVFLEERSQAWIEGLEISEARGSGLVVWTGADPRIRAVTVAGSGKNGIYVHEEGAGVFEDCEISRSAFPALYVGSKAAPVLRRCLVRDVQEDLSAAEDAVPVFEDCTVRDVAVGTMPHRPEEAARSGGPGSSAVPGRPAEQDPAPEQLPALMKELEALVGLERVKQEVGSLTKVMQMVKRREEAGLQPPPLSRHLVFAGNPGTGKTTVARLYGRLLAALGLLARGHLVEADRGSLVGEYVGHTSPKTTAVFRRAMGGVLFIDEAYALVPHGQSTDFGHEAIATLVKLMEDHRDDVVVIAAGYPADMRRFMESNPGLESRFTRTLTFDDYAADELVEIVRYQAVRHQYRLPDETLAALLGYFDGLERAEHFGNGRAARQVFQRMTEQHAERVADLPEPDTDDLTIIRPQDLPESLAPP
>NZ_CP050177.1|WP_167029503.1|3535999_3537358_+|hypothetical-protein
MDDERCRITVVGSRRRVDLAVPARTAIAEYTPGLLRLCGQDEEDDTFPAAWSLALPGARPLSPGVSLSEAGVADGATLYLRDAAAGEFDGPEITDLDELVGEANQDGLHWDTRQHALTVLFLGLGGMVAALAVFVGLTAGDAVYQAAGLGAVVGGLGLAVLAGHATRRAWPLALPVRLGLALAAVPLVAVGAVLLVPSSRDSSTAVIVATASGVLAGALAARLAVNHALTLTTLVVAAVVLPTAGLLAGFGATLVESAGVVAVLAMGALAVLPVTAGHLVALSAPSDAREGVSGASVPGLVALGRRVLAGLTQVLSAVLVAALVVLGTAADAYALILTLVVSGVLLLRSGQLKITAAVLPMAAAGFAGLATVLLHAPGALGAPDWSGPLAGLVAGAVLLGTGVVRALPAAEQIRERPSWFSGLSSALALTAVPLAVGLFGVFGTLMNMGELM
>NZ_CP050177.1|WP_167029500.1|3535614_3535935_+|WXG100-family-type-VII-secretion-target
MPGFDDVQILVTHELGTAGPTLTNRADECVDELNALKARLAPLADSWTRSQAASFYQEKQAEWDTAALGLFGPEGILAQIAHAMNVNYGNYADAELSNISTWRSGN
>NZ_CP050177.1|WP_167029497.1|3535243_3535603_+|WXG100-family-type-VII-secretion-target
MSTPVEQSTTIGDVEYSVTPGELLAAANSTNTTAQELDAQLSALKTYVIGLEEAWHGMAANEFQDLMVQWDTYARMLNDALTSIAGGLQGNYGNYDVSEQRNLTNLSSVRANIPSANFS
>NZ_CP050177.1|WP_167029529.1|3551843_3564773_+|hypothetical-protein
MPRVAASGAVRDRWDIDAALAALADPGRNPGDVALALANASTIMVVRAHQVLPGVDPRGIAPLVPRPTGGPGVVIRPAMVRAQHLVAAEILRHGVLAGQVLARDLLPGAVKPEGAAPPVLYGTTYDHAGRTVQLGSHSVPLTDLPDFLRENLDWRPGLPVILPVPMTPAALGTPGTAEAAGPAELTLPEALADALGTPVLVPVADDNNPLAPLLWVELGPGGEVLGSAPSLGVLITDSPWSTQADVPAEFGGPSADRGQEPSAVESQDHSDTLQRYTDARRDAITAQDALDTARAAHAAGIQASAHADGSAVAAAAVRLDAALDRLTGAEREWSARTGGEPLPTVQEVAEPTGALPGGAPWFRRLLERVRVAGASSGPSAPFVPSTESTPPASSTPPAPLAGAGAGAPPVPPPAVPPAEPGDFGGIAAELLASMTIGRRDAFGGDPFGVRNPAPAPDFLQVEGHPYDYAALRPDQLTAFFHALDLGRPDRPTAAELSPRTLPRQPRTVTTGSAARDAAGHRVRNEMPHLAHSIWFGGPLHDDGPHGSRTDFRQNVSAAAGANPRITFVVWTDLTRAETEEVRRLPDGPVTERQAQAASMLEWAAGRPNIVLVNADEVFNAATPASTQAEILTERARGGKSYAMASDLFRVEALHTFGGVYSDGDNTITGLVKQLRPVADRPDGFAVVRVDMPRNPQDAPGRDSRALTNAAVASVARGTAVGVYRDLLRANYALTYASLLRKPFAGLGQVDDDTINQDNTRFGDRLHQPSIEVVQRTGPNKVTYDAIARALGLTQQDVPANAPADAPAAGDRFRLGAIPPEVIAPGSKNSWNVGFSETATQVSRDRLLSTVRTLVIELHAELRNRPGGVYLPAVARAAEKLPPADRIPFWHTALDLFHTSLGDQAGDIRWITGKGVTVPVEVHPALVRLFPGAEHVGFTVTAPPPPVPAPGPGPDTGTGTGTGTRTRTRTESDDDIDHSLATDFPHTVVDYPADGDGWYVEPPEVIPVPDRSRALRAFERAWAKAPAEAPGEGAPTNPVHVAVLDAYTLVRQFQELPFGGIAGRLEEHADDFTGLAPADQDVVIVAHHLLTAPEADPAEAPRLARALSEGRPTPRPGGLSGGAPTWLSPSQRAAYATVEPAIGQVLRRMTTDQVDSDDPLDRAFLEPRNADGGMSATAQQYILQQAEQVFRHVIGSIFGDARTPGLGVRRSRAAADSTVWERFTADRQASFPEVESYLLRPDRTYASDINVPYNALHTMQVPVNSTQITVRYDPTEPAQVRDARIGQAVRAVTRVQQAGFTVPPMEFILPKYGRQLQILDDGRVEHVEVRNGWGAAAEYFAPNRFVLSPVLRSTAQRLRTASGTFGAVKMRFAADDIAMIVHEIGHGLHQNQNQARHFDAKGTRFTAQALAHATELSVYSERPNEFVAEAFTAIVMGQQLTSGQTDLYLALGGPLPSHAPLPPAPPAPHFGDLRNEVNLHLRGRGDTRVANPQDVRTAYEQLPPGLKQSYLRLMAAAVADILQTGAVGRMLGGAPATGTVTVTDAEQDEQVAGPSGTTSDDKGQGEGQGNGKGKGRENSGPEAAPARVPAPETAPGSLSATAREIIRNLQENADRRGFGEGRLPDRPGPLGVDLFGLLEPYPVPEFLTDPATGTPYDYTRLDADRTVQFLYNMDMAESPSAALMDPATWEVSGLSASHERADTRWSPGADVEPLPDRTVHMPGLVHAIWLGGPLTESGPGGSFRDQFGGDAERLRGQAMFTLWSDVPRWAVEAVRDLEEAPEDAYYADVWRFVNWARDRGVALVNVHEVFNEARPLSLHAEVMTELAKQTGPGYAAASDILRLEIVAAFAGLYVDGDNELRNVGSLWETLASDAAFAINTKSGIFTNSTLAATQGHPFPRLALEVIKENYAQTQPELQGPRVAALPPAFWTRGMGLARRNSVMRRTGPDAYPAVARRTGYASTAAMPAMGGVNVRSDNSWLSTRSDEARDFSLDELTAFTESAVHTLVRGLHNRPGDLSLLPLENAIRRLPLPTPPEGEPDSVRDALWEAAVGYLASREDLRALVRGVTRTTLPPHSTEPRGIVLPRAVEDLLEPLTGADARPPIGNAEGWWFGDRSEPATLLPLPAQALEAAGTDGSLTGPGAEADAGAVADAVPAGLRNEVNLRLRSRGDSRVATDDDVAAAYRELPPHLQHAHLRRTASAIADLVQSGELGRVIGGSSTATMTTTATTTTTTTTTTDIAAGPSGTSADKGKGRADGRDRTNLLPRAPRAEAPAPDPAPAPAPAAPLAENEPDHARPYPWYVDHGALGDAEVAQVPRWSDGRAHMWASIVTSYLTDQTLADAVTPVLREILASEDVAGWNELLANGRTLVVGGKLVWLKPVPAGIRPHARPAPLPTGAEAVPVPETVPAPAPVTETAPVPVPEGWAPEGDREFRVGTRSTARSGARTTTSALTSAAMVAVDVASAHASALYPVPRVSVTASTGESRGYEAAVKTAHRTHAEWKDFSAADSHLRFRVFVDGEEQANDAEVPRDLGVVFPPALPADVTPDTTVLDATPPQTPDGRPEVQRPVRNPQYLNALDTVPLITGLHRQLREAGLPAVTVRDVMTQLDAWLAEKSLRQQGRWVLTSGLSTGPIEAGIPGRTKPFRASFTIKAGIADLQFLGLSEPGLSRGLEGLGSSSSAGVAGSSGVSVSAGVSLSGLTDGGGAPVTGRFPDVSVVGSAARGVGFTLSSTTARHTEFKSAKPQVTYAAGLGLSVSVTSPTHPDIGEVTRTVQSELGTMWRGRPHAADFERRVLGAVRTPLFRPPVDPADEAARPALLPGPVDAQPHVRALLKESGTRPVRRTTRPARLDAPLPAPHPREPRALASRKGGGYATTLGLPGAELVQDHFLAALRDDVERRGAKVADWTTVERDLSGTFGRPVLEQDPGRVMAGYRRTVWVGGRPYRLYVRGHLVERLPGDVATTMEVESVVGTGGGVSSRRGTNWTVRANVGGGLRVKILDLLSLQLGSVGGYVGYGRGNEVSFTGGNKSSRRSKPKAGADEHTYNVVYEQRLTPLKVPSWPARDKKEALRKPRADGPTETWWIDRPGDVVAQVVVPHAFVPGTPVTAAEAAGVGTAKREESWPAGPGRDGQHLDFARGGTGGVVPAFLPAPELARTAAALYADLNGLGEEWARDPELWPDEIHALADPAVLGAAFNDLVGRFGHEPELAHRKGFQQALRVRLRAYAPQDLGETATATDIVDTKEVNSGQGSVRGTTVEVGVSGTVGGYITALGAEAGEHSSVGASGGHLYAQGRVWTSRGWSTTHREEPGQLNRNKATYRGAPHEVDSLPVFEVTAVRWKNGGRQEERTGYLSVTQGLQLLVPPRTLEEVMPAGETTGEQAAGERPAVEQAAVEQEAVAQGAVEQTPAEQAAAREPLPAPVERDYLVPDIASGIGRPEVMHADQVLDTIVARLAAHGVLRTGQSADSPRPDLLTRTLHQLYSSESLANQLPVLLGTGVWSWLPVPGFLGATSYVWVRVVAERVRPAHAHRPRPEMKLNVAAAATSNTRDEKGTFKSSGGDVRSRVGGFTDGTTDAGFETGAGYRSTSSRTVADSGAGSEVYDADPQDTLEEFSHQVDFRVEVGGTTELPRVLDLPLTGAHHALLSAAHHGFDSRDAIARWLDGHRAWTWFERDARPTGDVRLLVPTHLTGPAGEQRVVPVSQSLGTEPRWAGPPAAPPGLPEALLHGLHPLAVPAAAAVERWAGVAGSAARRAPDLGAAAASRDARGPDFTTTAGPAYAHFAGTGMLKTHIAQLLEHTYGVPVDGGNVTVGFRLDGAHVVGPQEGFAYDAARYSKNETTTSYAEAESRGWSAGAGPRVVGAGVDPTTVYGDASAEGGVAQSFGQVFRDGDNDENSRTGKVKRPYRYYQFDLTVVLQGPRRTLEVRAPGGLLGMLPLGPDGKLIGDLETALPELFGGAVTETPLTRAPGVAGPLPRVEETAEEHLLAAAPPPVAEPAPLAEPAPVTDLAPVTDLAPVTDPAPLADLAPVTDPAPVTDLAPVADLAPAADLAPVADLAPAAEPARAEAPPAPLAPPAPLAPLAPLAPLAPLAPAQAAPVRETPPTTDPAHEAAPAPGTAPTPEITPAPAPPLTAPEPPRPVVTANTWAGTAPVLNPVVGVQPGARNGTGDTTAPATPVTPAPTAAPPTVPQAFLDAPRPNRPAPPAEEAPAGNVPPETIPTPPPLTAEPRTADPSSDEVPNDPVALIRAEYEAARQDAMTVRERYAAAAARSAAGRSVGCEFAEAAVSLGAAEDRFDRAQAMLNLLGG
>NZ_CP050177.1|WP_167029531.1|3564830_3566552_-|methionine--tRNA-ligase
MARHLITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKEAGLPVAEFCARAHDEQKAVYDGFQLAFDYFGRSSSPQNAEITQHFARQLQKNGFIEERAIRQVYSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIDPRSAISGSTELEVRETKHLFLLQSKLQHEVEAWVGRHEEQWPQLSSSIARKWLTEGLHDRAITRDLDWGVPVPADTWPELAADGKVFYVWFDAPIEYIAATKEWSDAAPDGETRDWKSWWFEADDTVRYTQFMAKDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTFYGGKFSTSQKRGVFTDAALELLPADYWRYFLIANAPESDDSSFTWEHFAATVNKDLADTLGNFVNRVLSFSRKRFGDDVPAGNAAGEAEAKLGEEIARLLGEYEEYMDALQYRKAGAALRALWSAGNSYLEAKVPWTEVKTDPEGAALTLRTAMNLIHLYAIVSEPFIPASAAAMRGAFALEGDTATWVTADEARSLDAVPAGTPFTVPPVLFAKLSDEDLETYRTRFGGADA
>NZ_CP050177.1|WP_167029534.1|3566830_3567433_+|SMI1/KNR4-family-protein
MSDHDELIRRVRTLAVQESSPLPPCVDSAAVAEAERLLGFGLPPLLVRLYAEVANGGFGPDYTLFPLLGEGQTVVSEYGEQRPVQPAEPAGSIGPAEPEETWDSEPHWPHGVLPVLEWGCAMYAAVDCLRPDAPVLLFEPNGYVDDWAEVWFRDAPSLSEWLLRWVNGTGWWEEDATRSEDAVVPVPWPEAADRINVSAQ
>NZ_CP050177.1|WP_167036843.1|3567434_3569315_-|ABC-transporter-ATP-binding-protein
MGWNKHEDAFLQLNLRSMITGMPRLLRMTGQLAWEADRGALKLVALAEAGRGISQAVGLIAVNRVLAHLLGEGTTAERLADAGGALALAAGTALAGAVLRALATAGTGQLEPKVERVATERYLSHTARVELEAVEDDEFHKLLDSAQYGASSARRMVQYCQGVLNALMSLVAAAGVLAVLHPVLLPLLVAMTVPSAWAALSVARRRYASFQVWVQHSRAGHLISQMLISTDAAPEIRVHDVGPFLLHHFRAMSQSQEAEQRRLARLAARTGLIAAGWTGLATAAAYSTLGGLLWTGTMALAVGGTAVLAIRSGSASLENLVLQVNYLHEESLFVGDLHRLCEEAVTRSIPTGGVPLPPDPAEITFENVEFTYRGKDNKRALDGVSLTIPTGKIVALVGENGSGKSTLIKLLCGLYQPDAGRILWDGVDAAKADRQELVSRVAVVGQDFYRWPFTAAVNISIGRADVPVSRPRLEEAVRYAGAEDLIAELPRGWQTLLARGYKGGHQLSGGEWQRLGLGRAHYRSGQILIVDEPTSALDAKAEQRLFEQIRTLADAGQTVILITHRLGSVRAADLIHVLDHGRVAESGTFPALMSDHTPGPHLFRSLYQLQAAQYTTLPAAPVRPGN
>NZ_CP050177.1|WP_167029537.1|3569605_3570307_-|hemerythrin-domain-containing-protein
MAASPQAGAEGSRMYDELLAVHMIMRRGTTLVTTSFARLTAGEAVDVRALVRTSRWLIAFVHHHHASEDELFWPVLRGLFPSSVAVLDALTVEHEALDVELHTLTRAVDGIADPAVAGERAKTLAVVGQAALAGLPSAQKVQDLLAAHLDREEPVLRDLFPQVPDADIVRVRKAIVHSAPRDSPHLVFGLMEDPVRVPGYAAMAANFPPPLRWLRPLLLTRYRATKKALGATR
>NZ_CP050177.1|WP_167029540.1|3570527_3572336_+|S9-family-peptidase
MTQITGSMPDWEKRFRAPRVSLPDWAEDAPQRALFVSNATGTYELYAWDRATGEQRQATDRPNGTTDGVLSPDGEWIWWFSDTDGDEFGVWMRQPFVASGAGTGAGSGDEPATPGLEPSYPGGLALGRDGTSVVGRSTDEDGSTLHVVRPGQPPVEIYRHRESAGVGDLSYDGDLLAIEHTEHGDAMHSAVRVLRLDGSVVAELDDTAGGTRELGLEVLGFAPVAGDSRLLVGHQRRGRWEPIVWDPLTGEETDLAIELPGDVNAEWYPDGSGLLVAHSFEARGELWRYDFARRALIQVDTPPGTVSGATARPDGSVEYLWSSAAQPPEVRSTAGGVVLDPPGAAAPASVPVEDAWVAGPGGRVHALVQRPEGEGPFPTVFEIHGGPTWHDSDAFAAGPAAWVDHGFAVVRVNYRGSTGYGRDWTDALKHRVGLIELEDIAAVREWAVTSGLADPAKLVLSGGSWGGYLTLLGLGTQPEVWAVGLAAVPVADYVTAYHDEMEALKAMDRTLLGGTPEEVPERFEASSPITYVDAVRAPVYISAGVNDPRCPIQQVENYVDRLAARGAPHEVYRYDAGHGSLVVEERIKQVRMELDFAARHLA
>NZ_CP050177.1|WP_167029542.1|3572602_3573367_+|SURF1-family-protein
MYRFLVTPHWWGINLFVVLAIPVCIFMGTWQLGRFEDRVATQNAADRRPDPATEATAPLAKLLPVDQETSGRHATATGRYGDQFVVPDRELDGKDGSYVLTLLRTDGGKALPVVRGWVADGEKVPAPPAGEVTVTGALQASETSGSTGVHTGGGLPQGQLGMISAASLINVVPYAVYDAWVTVSQASPGLLPVPATAAQNTGLDLKAFQNLGYTGEWFVFAGFVVFMWFRLFRREVETAKDRALGLDLGLDTAA
>NZ_CP050177.1|WP_167029545.1|3573446_3574751_-|hypothetical-protein
MKGRGFGRTNGRGDGRENARHEEPDRWDPDRDRRPGDTQGAPMNDLTGNGIVNNGPENELSGLRKALGGDNGAESGTGKGDDDGSGREDFGFGDDELALRRLFHTAVEDLEPSDGALDHLRKAVPTRRARKRQAMVGVAAAALLCGTAIPAFVHVANSSSTTDSRSVNAGHGEREQHGADGGKTSGGIHKDTDHLPGEASSDPDASGKPDKPKDPSPGSVNGGTGGTAPPHDTSTASSPVCDPNQLNVVTARTGAPTADGTVYGTFRVANVSGSECAVAGKGTVNFTAAGAADRDKIAVVQHTAGDQASGLPDPSLEAPAMVLPPNGAYEVQFAWVPADTCPTVDPSPDPSPTDNVSSGTTTGSTGGSNPGSSATSGTDATSTDTQLVEDGGGTEDGSVTVSHTAEPGSPVAEATIPNACAGTIYRTGVLPPTA
>NZ_CP050177.1|WP_167036847.1|3574747_3575323_-|SigE-family-RNA-polymerase-sigma-factor
MPVIARMPAARSTRIPAQRDGSDDTAAAGTTVDHLTETYRAHYRSLLGLAALLLDDTASCEDVVQEAFIRVHSARNRVREPEKTLAYLRQTVVNLSRSALRRRILGLKLLSKPMPDMASAEEGAYDQLERDALIKAMRGLQRRQREVLVLRYFADMTEAQVAETLGISLGSVKAYGSRGIKALRVVMEAQA
>NZ_CP050177.1|WP_167029548.1|3575847_3576906_-|aspartate-semialdehyde-dehydrogenase
MNGKPTLAVVGATGAVGAVMLQILSQHADVWGDIRLVASPRTSGRKLSVRGQETEVVALTEQAFDGVDVAVFLVPDEVSTQWAPVAVAKGAVVVDNSAAFRMEPDVPLVVPELNSHAVRSRPRGIVASPGCATLSMVVAVGALHAEFGVRELVVSSYLAVSAAGQDGVTALRDQLSLVAGTDLGTHPGDVRRAVGDSTGPFAAPLALNVVPWAGSLQDGGWSSEETAIRDETRKILDLPGLRIAATCVNVPVITAHSAAVHARFEQEITVDRAHEILATAPGVVLFDNPGAGDFPTPSDVVGTDPTWVGRVRRSLDDPRALELFVCGDNLRKGAALNVAQIAEAVAVELSKA

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Crispr_ID: NZ_CP050177_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_16

3693891-3693968

Orphan

Consensus_repeat	Method
CACCGACCCCCTCGGCCACACCACCC	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP050177_16

>merge|NZ_CP050177|16|3693891-3693968|CRISPRCasFinder
CACCGACCGCAACCACCACACCATCACCGTCGACCGCACCGACGACGGCACCCCCCAGGCCCTCGTCCACTCCGCCGG

>NZ_CP050177|16|11|3693891-3693968|CRISPRCasFinder
CACCGACCGCAACCACCACACCATCA	CCGTCGACCGCACCGACGACGGCAC
CCCCCAGGCCCTCGTCCACTCCGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167029813.1\|3691084_3691597_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029845.1\|3705174_3706440_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP050177.1\|WP_167029807.1\|3689390_3690359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029839.1\|3703919_3704675_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP050177.1\|WP_167029792.1\|3683829_3684222_+\|divalent-cation-tolerance-protein-CutA	unknown	unknown	gnl\|CDD\|376987
NZ_CP050177.1\|WP_167029827.1\|3701254_3701653_+\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP050177.1\|WP_167029821.1\|3697112_3697565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167036882.1\|3687144_3687522_+\|DUF4259-domain-containing-protein	unknown	unknown	gnl\|CDD\|372905
NZ_CP050177.1\|WP_167029798.1\|3685115_3686201_-\|DNA-gyrase-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_CP050177.1\|WP_167029801.1\|3688005_3688641_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029833.1\|3702245_3702923_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP050177.1\|WP_167029795.1\|3684430_3685057_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379241
NZ_CP050177.1\|WP_167029815.1\|3691596_3692241_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029836.1\|3702964_3703813_+\|GlcNAc-PI-de-N-acetylase	unknown	unknown	gnl\|CDD\|274584
NZ_CP050177.1\|WP_167029810.1\|3690478_3690937_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029848.1\|3706626_3707298_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029804.1\|3688637_3689282_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029830.1\|3701633_3702233_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP050177.1\|WP_167029824.1\|3700826_3701258_+\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422
NZ_CP050177.1\|WP_167029842.1\|3704674_3705010_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167029833.1\|3702245_3702923_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	3.67282e-05
NZ_CP050177.1\|WP_167029824.1\|3700826_3701258_+\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	1.58379e-20
NZ_CP050177.1\|WP_167029827.1\|3701254_3701653_+\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	1.11155e-31
NZ_CP050177.1\|WP_167036882.1\|3687144_3687522_+\|DUF4259-domain-containing-protein	gnl\|CDD\|372905	pfam14078, DUF4259, Domain of unknown function (DUF4259). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 118 and 145 amino acids in length.	0.00636345
NZ_CP050177.1\|WP_167029839.1\|3703919_3704675_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.54981e-12
NZ_CP050177.1\|WP_167029845.1\|3705174_3706440_+\|APC-family-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	5.07857e-50
NZ_CP050177.1\|WP_167029795.1\|3684430_3685057_+\|hypothetical-protein	gnl\|CDD\|379241	pfam13529, Peptidase_C39_2, Peptidase_C39 like family.	6.05954e-06
NZ_CP050177.1\|WP_167029836.1\|3702964_3703813_+\|GlcNAc-PI-de-N-acetylase	gnl\|CDD\|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	2.96223e-55
NZ_CP050177.1\|WP_167029798.1\|3685115_3686201_-\|DNA-gyrase-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	5.24007e-91
NZ_CP050177.1\|WP_167029830.1\|3701633_3702233_+\|ATP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	2.08285e-38
NZ_CP050177.1\|WP_167029792.1\|3683829_3684222_+\|divalent-cation-tolerance-protein-CutA	gnl\|CDD\|376987	pfam03091, CutA1, CutA1 divalent ion tolerance protein. Several gene loci with a possible involvement in cellular tolerance to copper have been identified. One such locus in eubacteria and archaebacteria, cutA, is thought to be involved in cellular tolerance to a wide variety of divalent cations other than copper. The cutA locus consists of two operons, of one and two genes. The CutA1 protein is a cytoplasmic protein, encoded by the single-gene operon and has been linked to divalent cation tolerance. It has no recognized structural motifs. This family also contains putative proteins from eukaryotes (human and Drosophila).	2.27658e-46
NZ_CP050177.1\|WP_167029842.1\|3704674_3705010_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	7.89807e-18

>NZ_CP050177.1|WP_167029815.1|3691596_3692241_+|hypothetical-protein
MGGAEDLKVDKESVQRITNGLRAAVSELRDVGTGTGAVLGKGFSDLSLTGMEAGHHGLSVDFEDFCERWEWGVRALVQDANTIAAKLGLAAGLIWEEDQYVEGTFKIAVNSAVGNPHASEDDVVKQDWGDVFTPDYLSPDYSAESFEKAADEAGQTWKDTGRALVTEGQGGRQASALNDLIGVDQGDFDRAVDDTFGPSPEERARQQQQGDGGN
>NZ_CP050177.1|WP_167029813.1|3691084_3691597_+|hypothetical-protein
MGDGTALEERIAERRAGVGDPRALVGELRRALVLVPYDRGGLWTARFGGVRWVCGFTDEAALARFARARDAEDGREAARGPDPANRREGDGEAARGPDPANSQEAGPVWEFAALRGARLLDEIVPAMGEPAGVAVNIGDVDGAMLFPPVVGIVPEAVAVDAGEARDGERG
>NZ_CP050177.1|WP_167029810.1|3690478_3690937_+|hypothetical-protein
MSGPARWTVAAVLSVVAFALVLATVRAAPWGWLPKDDGDLWAVGTACGAVVAAAVLYALTWWNSRAAAPPVPAAPGRHVTQDADGRDDAVIEQTVGRRRPSVSGSDTAVGTPPSTPTGTPPGPGSAPVDSFTQRARGRGRSRIRQTGGDDHS
>NZ_CP050177.1|WP_167029807.1|3689390_3690359_-|hypothetical-protein
MSPRAPDDGPEPGEHTYLRARVKGRGHAYQVVNGTQNIAHHHHYDGLQAPLALPDLRLWIDRMAADYRTLATVGKGPVGRRRASSRTGELDALQEDLAATIEARKAGDQVRRLLAAGAAQYLYKSTRLPDGTLPESMMIDLAVFALWPLVQIPVPPAGWQDELARLTSPRLAQLVAQARRAGERGRPVPPDLFGRALAERPFTHGILALLEDLGDPRGGGACLTPLALAQGFSAPPRKAEPKAMLVWLFGAAALGGVGTSAASELAEQVWTWIHRQEHGTPDTPSVGGTDADDDGRPGSHHGTRPGYGHDPDDQGFLDDLFN
>NZ_CP050177.1|WP_167029804.1|3688637_3689282_-|hypothetical-protein
MIKHFLAAALITAALWAGSTAVLLLIGFGHVRTVRALMAVRRGLPRLPAGAVFHSRAGEVVMTWYNGARDADESLLLVRFSPPTLLRWRSGRGKSKAAVARRVNAELAWRTALVPLVTLPVFATTIWLAFTDSWLWIYATLYLVAHYALRAVSNRIFFFKFGFLSGVTAYLFLDRAELWHPSPTVAASLFFAMSVSAMALVAVAERSESRTADR
>NZ_CP050177.1|WP_167029801.1|3688005_3688641_-|hypothetical-protein
MSDHAGLRQAIGQAMAPFWYDREDRPRPDWVGEWSYWFVSAGNHLFDVLPGHEDDPRLVRYDDWTDSPENLPPSHCHGGPRALLDLDTPRTAESRRAADTWTAYHALAERFRTQDPRELTATASHEQPLIQTIESDPTLEERFTSNPALHFNEDQETYAARHAAAVLLTPTLLTLDGRWLEDGGPDHARMFNTYLDALPGETMVVRVLYHS
>NZ_CP050177.1|WP_167036882.1|3687144_3687522_+|DUF4259-domain-containing-protein
MGTWGAGNFDSDTAADHLGALADRLVSEVTEAMAGDPVELEPDEYWGTSVPCNLELLLLLVRQGWVGVTLPSPEVIRDWREVFLGVWERTIDDLGPDAAYKDERRVVLRETFERLAEAAEGGASL
>NZ_CP050177.1|WP_167029798.1|3685115_3686201_-|DNA-gyrase-subunit-B
MWIGSTGARGLHGLVFEVVGRAVNQVLSGGGGRVDVTLTPDGCVRVADDGPVAPFEATRDADRPNLDALLTRMPTGPHPPAWNNEAVIHFTAGLLVANALSSRLTAETQGTGARRTVQEYARGVPAAPPTPVERPNGHGTVIEFWPDPKIFETTSCSFALLAERFRQIAFLNRSLAISLTDERPATGPRAVSFRFPHGVRDFVAALHAETGSPLPPDLIGFERYDPRIAGTMEVALLWSDAHEQRLRSYANGRPTPQGGTHVDGFRDALATAVTAFAREQGLLAPTDPDPHTDRIGKGLTAVVSVKLDHPEFVGATRRQLSNPEVRNRIEESVREHLTNWFREHPKSAQEIATRITATPAA
>NZ_CP050177.1|WP_167029795.1|3684430_3685057_+|hypothetical-protein
MTGFRLIHRVPYYSQWESAALVAEFVSGVRGAAEDPLWLKSGADSAEDYAFWAPRMCGMACLRMALDHWGHEVPPSVPLVREAVEAGAYVRTEEQVKGLIYAPFAGWVARRWGLYAEVRPELVVGDVGSEIARGRVVLLSVHKSIRTLDPVPPQRGGHLVLAVGTDPDGVFLHNPSGLPGRSQEFHHVLWADLDRFFAGRGVVLGPHA
>NZ_CP050177.1|WP_167029792.1|3683829_3684222_+|divalent-cation-tolerance-protein-CutA
MSSVGASPGAGYVPRDALRRRPTVSEYLTVLTTTDSAEKAQTLAAGAVEARVAACAQVDGPIASVYRWEGTVRTDQEWRVLYKTTTDRYPALEAHIKAVHDYDTPEIIATPITHGSDAYLSWVSAETTTG
>NZ_CP050177.1|WP_167029821.1|3697112_3697565_+|hypothetical-protein
MEADSGTGPPAWHRTLEACGLVVLGRDASPSAPDVLTAIRAVTGVEVTPSVTVPESRADAAADLDRRWLATASALPLASGEGEFLVVPPGRGGSAVGWVRVHDPVGTGLPSRVAGATGSPEFLALSADGRHLCAVTSEEDEYWIVTRALP
>NZ_CP050177.1|WP_167029824.1|3700826_3701258_+|roadblock/LC7-domain-containing-protein
MTQRTTATDLDLDWLLDGLVDQVTGTRYAILLSDDGLAISRSRTIDRSDAERLAAIATGQQSLARGAGQLFGGGPVHQVIVEMAGLWLFVISAGHGTHLAVIASQDVDAELMSVAMHTLVQQVGQRLGTDARTPASDDAGRAG
>NZ_CP050177.1|WP_167029827.1|3701254_3701653_+|DUF742-domain-containing-protein
MRHWAEGFDDDDDDEQLVRPYTITSGRTAPERADLTLITLLTTVPDITPRGALAARRMQPEHRTILAMCREPKAVVEVAAELGLPVSLTKILIGDLVDSGQMWARAPRPFTRPGGLPDMTILEAVRDGLRQL
>NZ_CP050177.1|WP_167029830.1|3701633_3702233_+|ATP-binding-protein
MDYASSEHAAGRTDAAPLAVKILVAGGFGVGKTTLVGAVSEVAPLHTEEYLTLASVGVDDLEGLNSKFTTTVALDFGRITISDDLVVFLFGTPGQERFWFMWNDLVNGAMGAVVLVDTRRLDVSFASIDFFESRGIPFVVGVNCFHGVRDRSAEEIRAALALDPQVPLLLCDARDRGAGRDVLLALVDHLMASQSTSSV
>NZ_CP050177.1|WP_167029833.1|3702245_3702923_+|SMI1/KNR4-family-protein
MSTSTWAGVRDRVLGLAERPGADQVFGARGHGFRLGPVMDEVQLRSLEADLGVGLPASYRAFLLHVGGGGAGPDYGLMTPTPGDGGWQWRGTGLGFSAAPTTAEFAGRPFVAEALAGELAALEAREPGEDAYASEEEFRRAYAAWDARYEELYDAQEAGAVFLSEQGCGYSSLMVMTGPHRGAIWEDLRPMDRGIVPTGHNFGDWYRSWLERTERDLAGVRPTAT
>NZ_CP050177.1|WP_167029836.1|3702964_3703813_+|GlcNAc-PI-de-N-acetylase
MTDRPLTLMAVHAHPDDEATGTGGVLARYAAEGIRTVLVTCTDGGCGDGPGGVKPGDPGHDPAAVAAMRRDELAASCDVLKISDLEMLDYADSGMMGWATNDAPGAFWRTPVEVGAARLAELMRLYRPDVVVTYDENGFYGHPDHIQAHRITMAALEMIEAEPTPLTPKVYWTTMPRSAMRRFGETLREFGEEMPEPDPDEASPAFEIGLPDDEITTWVDATAFSDQKFDALAAHASQGENIFFLKMGRERFGGLMGMETFVRVKDTTGAALPENDLFAGLR
>NZ_CP050177.1|WP_167029839.1|3703919_3704675_-|cation-transporter
MATVSLGPGTARRDVLTRRIRLLVAATITYNAIEAVVAITAGTMASSTALIGFGLDSVIEVSSAAAVAWQFSAREHAVREAREATTLRIIALSFFALAAYVGVDAVRTLTGTGEADRSLPGIAIAALSLAVMPFLSAAQRAAGRELGSASAVADSRQTLLCTYLSGVLLTGLVLNAALGWSWADPVAALAIAVVAVKEGRDAWRGKGCCAPSSADFGTGPASAPADLRTVVTPPAGEADTPRAASACTCCG
>NZ_CP050177.1|WP_167029842.1|3704674_3705010_-|winged-helix-turn-helix-transcriptional-regulator
MLTLAPDIEVLARFGRALADPIRCRILLVLREAPAYPSDLADTLGVSRTRLSNHLACLRDCGLVVTVPDGRRTRYELADPRLGQALEHLLAAVVAVESDRTCADAATGECC
>NZ_CP050177.1|WP_167029845.1|3705174_3706440_+|APC-family-permease
MDGVRNPGAGGELKRRLGLSDAVLIGLGSMIGAGVFAALAPAARAAGSGLLPGLALAAVVAYCNATSSARLAARHPASGGTYVYGRERLGPFWGYVAGWAFVVGKTASCAAMALTVGTYAWPGRAHEVAVAAVVALTALSYTGVRKSARLTRVVVAVVLAVLAAVVVACLTGGTAQAARLDIGTDATAGGVLQAAGLLFFAFAGYARIATLGEEVRDPARTIPRAIPLALGITLVVYACVAVAVLAVLGPDRLAHATEPLTEAVRAAGAPALAPVVRVGAAVAALGSLLALILGVSRTTLAMARDGHLPRTLAAVHPRFGVPHHAEIAVGAVVAVAAATADLRGAIGFSSFGVLAYYAIANAAARTLSPSEGRPPRAVPVVGLAGCAALALALPLDSVLAGAAVLAVGAGVYGVRRARTAD
>NZ_CP050177.1|WP_167029848.1|3706626_3707298_+|hypothetical-protein
MPLPSNPLNPPNPADAHGTRLTERAIASVEADPHRLVLDHNKWAGPWIGAVAEPVPGDTLAAMVFPSGRPLPPSLRRWLAFDAGLLRRYGWFDAGLRFTPRTLGRLARDEFGDGWGAGFDTLSARFDECFLLPGGSDSRRVLATGEADEYGEYPVFALDVDDLPCVELMYPGLDVHLADTAGVISRREGGYSSLAEDATYGPRMRTHARNAFAGELHQICLPE

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Crispr_ID: NZ_CP050177_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_17

3694299-3694433

Orphan

Consensus_repeat	Method
CACCGACCCCCTCGGCCACACCACCC	CRISPRCasFinder

2 spacers

csa3

The CRISPR arrays of NZ_CP050177_17

>merge|NZ_CP050177|17|3694299-3694433|CRISPRCasFinder
CACCACCGCCGCCGGCCACACCACCCACCACCTCGTCGGTCCCGGCAACCACATCCTCGCCACCACCGACCCCCTCGGCCACACCACCCGCCACACCTACGACACCCGCGGCAACCCCCTCACCCACACCGACCC

>NZ_CP050177|17|12|3694299-3694433|CRISPRCasFinder
CACCACCGCCGCCGGCCACACCACCC	ACCACCTCGTCGGTCCCGGCAACCACATCCTCGCCAC
CACCGACCCCCTCGGCCACACCACCC	GCCACACCTACGACACCCG
CGGCAACCCCCTCACCCACACCGACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167029813.1\|3691084_3691597_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029845.1\|3705174_3706440_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP050177.1\|WP_167029807.1\|3689390_3690359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029839.1\|3703919_3704675_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP050177.1\|WP_167029792.1\|3683829_3684222_+\|divalent-cation-tolerance-protein-CutA	unknown	unknown	gnl\|CDD\|376987
NZ_CP050177.1\|WP_167029827.1\|3701254_3701653_+\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP050177.1\|WP_167029821.1\|3697112_3697565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167036882.1\|3687144_3687522_+\|DUF4259-domain-containing-protein	unknown	unknown	gnl\|CDD\|372905
NZ_CP050177.1\|WP_167029798.1\|3685115_3686201_-\|DNA-gyrase-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_CP050177.1\|WP_167029801.1\|3688005_3688641_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029833.1\|3702245_3702923_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP050177.1\|WP_167029795.1\|3684430_3685057_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379241
NZ_CP050177.1\|WP_167029815.1\|3691596_3692241_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029836.1\|3702964_3703813_+\|GlcNAc-PI-de-N-acetylase	unknown	unknown	gnl\|CDD\|274584
NZ_CP050177.1\|WP_167029810.1\|3690478_3690937_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029848.1\|3706626_3707298_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029804.1\|3688637_3689282_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029830.1\|3701633_3702233_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP050177.1\|WP_167029824.1\|3700826_3701258_+\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422
NZ_CP050177.1\|WP_167029842.1\|3704674_3705010_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167029833.1\|3702245_3702923_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	3.67282e-05
NZ_CP050177.1\|WP_167029824.1\|3700826_3701258_+\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	1.58379e-20
NZ_CP050177.1\|WP_167029827.1\|3701254_3701653_+\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	1.11155e-31
NZ_CP050177.1\|WP_167036882.1\|3687144_3687522_+\|DUF4259-domain-containing-protein	gnl\|CDD\|372905	pfam14078, DUF4259, Domain of unknown function (DUF4259). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 118 and 145 amino acids in length.	0.00636345
NZ_CP050177.1\|WP_167029839.1\|3703919_3704675_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.54981e-12
NZ_CP050177.1\|WP_167029845.1\|3705174_3706440_+\|APC-family-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	5.07857e-50
NZ_CP050177.1\|WP_167029795.1\|3684430_3685057_+\|hypothetical-protein	gnl\|CDD\|379241	pfam13529, Peptidase_C39_2, Peptidase_C39 like family.	6.05954e-06
NZ_CP050177.1\|WP_167029836.1\|3702964_3703813_+\|GlcNAc-PI-de-N-acetylase	gnl\|CDD\|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	2.96223e-55
NZ_CP050177.1\|WP_167029798.1\|3685115_3686201_-\|DNA-gyrase-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	5.24007e-91
NZ_CP050177.1\|WP_167029830.1\|3701633_3702233_+\|ATP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	2.08285e-38
NZ_CP050177.1\|WP_167029792.1\|3683829_3684222_+\|divalent-cation-tolerance-protein-CutA	gnl\|CDD\|376987	pfam03091, CutA1, CutA1 divalent ion tolerance protein. Several gene loci with a possible involvement in cellular tolerance to copper have been identified. One such locus in eubacteria and archaebacteria, cutA, is thought to be involved in cellular tolerance to a wide variety of divalent cations other than copper. The cutA locus consists of two operons, of one and two genes. The CutA1 protein is a cytoplasmic protein, encoded by the single-gene operon and has been linked to divalent cation tolerance. It has no recognized structural motifs. This family also contains putative proteins from eukaryotes (human and Drosophila).	2.27658e-46
NZ_CP050177.1\|WP_167029842.1\|3704674_3705010_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	7.89807e-18

>NZ_CP050177.1|WP_167029815.1|3691596_3692241_+|hypothetical-protein
MGGAEDLKVDKESVQRITNGLRAAVSELRDVGTGTGAVLGKGFSDLSLTGMEAGHHGLSVDFEDFCERWEWGVRALVQDANTIAAKLGLAAGLIWEEDQYVEGTFKIAVNSAVGNPHASEDDVVKQDWGDVFTPDYLSPDYSAESFEKAADEAGQTWKDTGRALVTEGQGGRQASALNDLIGVDQGDFDRAVDDTFGPSPEERARQQQQGDGGN
>NZ_CP050177.1|WP_167029813.1|3691084_3691597_+|hypothetical-protein
MGDGTALEERIAERRAGVGDPRALVGELRRALVLVPYDRGGLWTARFGGVRWVCGFTDEAALARFARARDAEDGREAARGPDPANRREGDGEAARGPDPANSQEAGPVWEFAALRGARLLDEIVPAMGEPAGVAVNIGDVDGAMLFPPVVGIVPEAVAVDAGEARDGERG
>NZ_CP050177.1|WP_167029810.1|3690478_3690937_+|hypothetical-protein
MSGPARWTVAAVLSVVAFALVLATVRAAPWGWLPKDDGDLWAVGTACGAVVAAAVLYALTWWNSRAAAPPVPAAPGRHVTQDADGRDDAVIEQTVGRRRPSVSGSDTAVGTPPSTPTGTPPGPGSAPVDSFTQRARGRGRSRIRQTGGDDHS
>NZ_CP050177.1|WP_167029807.1|3689390_3690359_-|hypothetical-protein
MSPRAPDDGPEPGEHTYLRARVKGRGHAYQVVNGTQNIAHHHHYDGLQAPLALPDLRLWIDRMAADYRTLATVGKGPVGRRRASSRTGELDALQEDLAATIEARKAGDQVRRLLAAGAAQYLYKSTRLPDGTLPESMMIDLAVFALWPLVQIPVPPAGWQDELARLTSPRLAQLVAQARRAGERGRPVPPDLFGRALAERPFTHGILALLEDLGDPRGGGACLTPLALAQGFSAPPRKAEPKAMLVWLFGAAALGGVGTSAASELAEQVWTWIHRQEHGTPDTPSVGGTDADDDGRPGSHHGTRPGYGHDPDDQGFLDDLFN
>NZ_CP050177.1|WP_167029804.1|3688637_3689282_-|hypothetical-protein
MIKHFLAAALITAALWAGSTAVLLLIGFGHVRTVRALMAVRRGLPRLPAGAVFHSRAGEVVMTWYNGARDADESLLLVRFSPPTLLRWRSGRGKSKAAVARRVNAELAWRTALVPLVTLPVFATTIWLAFTDSWLWIYATLYLVAHYALRAVSNRIFFFKFGFLSGVTAYLFLDRAELWHPSPTVAASLFFAMSVSAMALVAVAERSESRTADR
>NZ_CP050177.1|WP_167029801.1|3688005_3688641_-|hypothetical-protein
MSDHAGLRQAIGQAMAPFWYDREDRPRPDWVGEWSYWFVSAGNHLFDVLPGHEDDPRLVRYDDWTDSPENLPPSHCHGGPRALLDLDTPRTAESRRAADTWTAYHALAERFRTQDPRELTATASHEQPLIQTIESDPTLEERFTSNPALHFNEDQETYAARHAAAVLLTPTLLTLDGRWLEDGGPDHARMFNTYLDALPGETMVVRVLYHS
>NZ_CP050177.1|WP_167036882.1|3687144_3687522_+|DUF4259-domain-containing-protein
MGTWGAGNFDSDTAADHLGALADRLVSEVTEAMAGDPVELEPDEYWGTSVPCNLELLLLLVRQGWVGVTLPSPEVIRDWREVFLGVWERTIDDLGPDAAYKDERRVVLRETFERLAEAAEGGASL
>NZ_CP050177.1|WP_167029798.1|3685115_3686201_-|DNA-gyrase-subunit-B
MWIGSTGARGLHGLVFEVVGRAVNQVLSGGGGRVDVTLTPDGCVRVADDGPVAPFEATRDADRPNLDALLTRMPTGPHPPAWNNEAVIHFTAGLLVANALSSRLTAETQGTGARRTVQEYARGVPAAPPTPVERPNGHGTVIEFWPDPKIFETTSCSFALLAERFRQIAFLNRSLAISLTDERPATGPRAVSFRFPHGVRDFVAALHAETGSPLPPDLIGFERYDPRIAGTMEVALLWSDAHEQRLRSYANGRPTPQGGTHVDGFRDALATAVTAFAREQGLLAPTDPDPHTDRIGKGLTAVVSVKLDHPEFVGATRRQLSNPEVRNRIEESVREHLTNWFREHPKSAQEIATRITATPAA
>NZ_CP050177.1|WP_167029795.1|3684430_3685057_+|hypothetical-protein
MTGFRLIHRVPYYSQWESAALVAEFVSGVRGAAEDPLWLKSGADSAEDYAFWAPRMCGMACLRMALDHWGHEVPPSVPLVREAVEAGAYVRTEEQVKGLIYAPFAGWVARRWGLYAEVRPELVVGDVGSEIARGRVVLLSVHKSIRTLDPVPPQRGGHLVLAVGTDPDGVFLHNPSGLPGRSQEFHHVLWADLDRFFAGRGVVLGPHA
>NZ_CP050177.1|WP_167029792.1|3683829_3684222_+|divalent-cation-tolerance-protein-CutA
MSSVGASPGAGYVPRDALRRRPTVSEYLTVLTTTDSAEKAQTLAAGAVEARVAACAQVDGPIASVYRWEGTVRTDQEWRVLYKTTTDRYPALEAHIKAVHDYDTPEIIATPITHGSDAYLSWVSAETTTG
>NZ_CP050177.1|WP_167029821.1|3697112_3697565_+|hypothetical-protein
MEADSGTGPPAWHRTLEACGLVVLGRDASPSAPDVLTAIRAVTGVEVTPSVTVPESRADAAADLDRRWLATASALPLASGEGEFLVVPPGRGGSAVGWVRVHDPVGTGLPSRVAGATGSPEFLALSADGRHLCAVTSEEDEYWIVTRALP
>NZ_CP050177.1|WP_167029824.1|3700826_3701258_+|roadblock/LC7-domain-containing-protein
MTQRTTATDLDLDWLLDGLVDQVTGTRYAILLSDDGLAISRSRTIDRSDAERLAAIATGQQSLARGAGQLFGGGPVHQVIVEMAGLWLFVISAGHGTHLAVIASQDVDAELMSVAMHTLVQQVGQRLGTDARTPASDDAGRAG
>NZ_CP050177.1|WP_167029827.1|3701254_3701653_+|DUF742-domain-containing-protein
MRHWAEGFDDDDDDEQLVRPYTITSGRTAPERADLTLITLLTTVPDITPRGALAARRMQPEHRTILAMCREPKAVVEVAAELGLPVSLTKILIGDLVDSGQMWARAPRPFTRPGGLPDMTILEAVRDGLRQL
>NZ_CP050177.1|WP_167029830.1|3701633_3702233_+|ATP-binding-protein
MDYASSEHAAGRTDAAPLAVKILVAGGFGVGKTTLVGAVSEVAPLHTEEYLTLASVGVDDLEGLNSKFTTTVALDFGRITISDDLVVFLFGTPGQERFWFMWNDLVNGAMGAVVLVDTRRLDVSFASIDFFESRGIPFVVGVNCFHGVRDRSAEEIRAALALDPQVPLLLCDARDRGAGRDVLLALVDHLMASQSTSSV
>NZ_CP050177.1|WP_167029833.1|3702245_3702923_+|SMI1/KNR4-family-protein
MSTSTWAGVRDRVLGLAERPGADQVFGARGHGFRLGPVMDEVQLRSLEADLGVGLPASYRAFLLHVGGGGAGPDYGLMTPTPGDGGWQWRGTGLGFSAAPTTAEFAGRPFVAEALAGELAALEAREPGEDAYASEEEFRRAYAAWDARYEELYDAQEAGAVFLSEQGCGYSSLMVMTGPHRGAIWEDLRPMDRGIVPTGHNFGDWYRSWLERTERDLAGVRPTAT
>NZ_CP050177.1|WP_167029836.1|3702964_3703813_+|GlcNAc-PI-de-N-acetylase
MTDRPLTLMAVHAHPDDEATGTGGVLARYAAEGIRTVLVTCTDGGCGDGPGGVKPGDPGHDPAAVAAMRRDELAASCDVLKISDLEMLDYADSGMMGWATNDAPGAFWRTPVEVGAARLAELMRLYRPDVVVTYDENGFYGHPDHIQAHRITMAALEMIEAEPTPLTPKVYWTTMPRSAMRRFGETLREFGEEMPEPDPDEASPAFEIGLPDDEITTWVDATAFSDQKFDALAAHASQGENIFFLKMGRERFGGLMGMETFVRVKDTTGAALPENDLFAGLR
>NZ_CP050177.1|WP_167029839.1|3703919_3704675_-|cation-transporter
MATVSLGPGTARRDVLTRRIRLLVAATITYNAIEAVVAITAGTMASSTALIGFGLDSVIEVSSAAAVAWQFSAREHAVREAREATTLRIIALSFFALAAYVGVDAVRTLTGTGEADRSLPGIAIAALSLAVMPFLSAAQRAAGRELGSASAVADSRQTLLCTYLSGVLLTGLVLNAALGWSWADPVAALAIAVVAVKEGRDAWRGKGCCAPSSADFGTGPASAPADLRTVVTPPAGEADTPRAASACTCCG
>NZ_CP050177.1|WP_167029842.1|3704674_3705010_-|winged-helix-turn-helix-transcriptional-regulator
MLTLAPDIEVLARFGRALADPIRCRILLVLREAPAYPSDLADTLGVSRTRLSNHLACLRDCGLVVTVPDGRRTRYELADPRLGQALEHLLAAVVAVESDRTCADAATGECC
>NZ_CP050177.1|WP_167029845.1|3705174_3706440_+|APC-family-permease
MDGVRNPGAGGELKRRLGLSDAVLIGLGSMIGAGVFAALAPAARAAGSGLLPGLALAAVVAYCNATSSARLAARHPASGGTYVYGRERLGPFWGYVAGWAFVVGKTASCAAMALTVGTYAWPGRAHEVAVAAVVALTALSYTGVRKSARLTRVVVAVVLAVLAAVVVACLTGGTAQAARLDIGTDATAGGVLQAAGLLFFAFAGYARIATLGEEVRDPARTIPRAIPLALGITLVVYACVAVAVLAVLGPDRLAHATEPLTEAVRAAGAPALAPVVRVGAAVAALGSLLALILGVSRTTLAMARDGHLPRTLAAVHPRFGVPHHAEIAVGAVVAVAAATADLRGAIGFSSFGVLAYYAIANAAARTLSPSEGRPPRAVPVVGLAGCAALALALPLDSVLAGAAVLAVGAGVYGVRRARTAD
>NZ_CP050177.1|WP_167029848.1|3706626_3707298_+|hypothetical-protein
MPLPSNPLNPPNPADAHGTRLTERAIASVEADPHRLVLDHNKWAGPWIGAVAEPVPGDTLAAMVFPSGRPLPPSLRRWLAFDAGLLRRYGWFDAGLRFTPRTLGRLARDEFGDGWGAGFDTLSARFDECFLLPGGSDSRRVLATGEADEYGEYPVFALDVDDLPCVELMYPGLDVHLADTAGVISRREGGYSSLAEDATYGPRMRTHARNAFAGELHQICLPE

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Crispr_ID: NZ_CP050177_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_18

3694614-3694765

Orphan

Consensus_repeat	Method
CACCGACCCCCTCGGCCACACCACCC	CRISPRCasFinder

2 spacers

csa3

The CRISPR arrays of NZ_CP050177_18

>merge|NZ_CP050177|18|3694614-3694765|CRISPRCasFinder
GACCGACCCCGCCGGACACACCACACGTTTCGCGTACGACGCACACGGCCGGCTGGTCGCGGTCACCGACGCGCTCGGGGCCGTCACCACCGTGCGGTCCGACCCGGCCGGGCTGCCGCTGGAGGTCACCGATCCGCTGGGCGGCACCACCC

>NZ_CP050177|18|13|3694614-3694765|CRISPRCasFinder
GACCGACCCCGCCGGACACACCACAC	GTTTCGCGTACGACGCACACGGCCGGCTGGTCGCGGT
CACCGACGCGCTCGGGGCCGTCACCA	CCGTGCGGTCCGACCCGGCCGGGCTGCCGCTGGAGGT
CACCGATCCGCTGGGCGGCACCACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167029813.1\|3691084_3691597_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029845.1\|3705174_3706440_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP050177.1\|WP_167029807.1\|3689390_3690359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029839.1\|3703919_3704675_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP050177.1\|WP_167029792.1\|3683829_3684222_+\|divalent-cation-tolerance-protein-CutA	unknown	unknown	gnl\|CDD\|376987
NZ_CP050177.1\|WP_167029827.1\|3701254_3701653_+\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP050177.1\|WP_167029821.1\|3697112_3697565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167036882.1\|3687144_3687522_+\|DUF4259-domain-containing-protein	unknown	unknown	gnl\|CDD\|372905
NZ_CP050177.1\|WP_167029798.1\|3685115_3686201_-\|DNA-gyrase-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_CP050177.1\|WP_167029801.1\|3688005_3688641_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029833.1\|3702245_3702923_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP050177.1\|WP_167029795.1\|3684430_3685057_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379241
NZ_CP050177.1\|WP_167029815.1\|3691596_3692241_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029836.1\|3702964_3703813_+\|GlcNAc-PI-de-N-acetylase	unknown	unknown	gnl\|CDD\|274584
NZ_CP050177.1\|WP_167029810.1\|3690478_3690937_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029848.1\|3706626_3707298_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029804.1\|3688637_3689282_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167029830.1\|3701633_3702233_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP050177.1\|WP_167029824.1\|3700826_3701258_+\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422
NZ_CP050177.1\|WP_167029842.1\|3704674_3705010_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167029833.1\|3702245_3702923_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	3.67282e-05
NZ_CP050177.1\|WP_167029824.1\|3700826_3701258_+\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	1.58379e-20
NZ_CP050177.1\|WP_167029827.1\|3701254_3701653_+\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	1.11155e-31
NZ_CP050177.1\|WP_167036882.1\|3687144_3687522_+\|DUF4259-domain-containing-protein	gnl\|CDD\|372905	pfam14078, DUF4259, Domain of unknown function (DUF4259). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 118 and 145 amino acids in length.	0.00636345
NZ_CP050177.1\|WP_167029839.1\|3703919_3704675_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.54981e-12
NZ_CP050177.1\|WP_167029845.1\|3705174_3706440_+\|APC-family-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	5.07857e-50
NZ_CP050177.1\|WP_167029795.1\|3684430_3685057_+\|hypothetical-protein	gnl\|CDD\|379241	pfam13529, Peptidase_C39_2, Peptidase_C39 like family.	6.05954e-06
NZ_CP050177.1\|WP_167029836.1\|3702964_3703813_+\|GlcNAc-PI-de-N-acetylase	gnl\|CDD\|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	2.96223e-55
NZ_CP050177.1\|WP_167029798.1\|3685115_3686201_-\|DNA-gyrase-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	5.24007e-91
NZ_CP050177.1\|WP_167029830.1\|3701633_3702233_+\|ATP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	2.08285e-38
NZ_CP050177.1\|WP_167029792.1\|3683829_3684222_+\|divalent-cation-tolerance-protein-CutA	gnl\|CDD\|376987	pfam03091, CutA1, CutA1 divalent ion tolerance protein. Several gene loci with a possible involvement in cellular tolerance to copper have been identified. One such locus in eubacteria and archaebacteria, cutA, is thought to be involved in cellular tolerance to a wide variety of divalent cations other than copper. The cutA locus consists of two operons, of one and two genes. The CutA1 protein is a cytoplasmic protein, encoded by the single-gene operon and has been linked to divalent cation tolerance. It has no recognized structural motifs. This family also contains putative proteins from eukaryotes (human and Drosophila).	2.27658e-46
NZ_CP050177.1\|WP_167029842.1\|3704674_3705010_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	7.89807e-18

>NZ_CP050177.1|WP_167029815.1|3691596_3692241_+|hypothetical-protein
MGGAEDLKVDKESVQRITNGLRAAVSELRDVGTGTGAVLGKGFSDLSLTGMEAGHHGLSVDFEDFCERWEWGVRALVQDANTIAAKLGLAAGLIWEEDQYVEGTFKIAVNSAVGNPHASEDDVVKQDWGDVFTPDYLSPDYSAESFEKAADEAGQTWKDTGRALVTEGQGGRQASALNDLIGVDQGDFDRAVDDTFGPSPEERARQQQQGDGGN
>NZ_CP050177.1|WP_167029813.1|3691084_3691597_+|hypothetical-protein
MGDGTALEERIAERRAGVGDPRALVGELRRALVLVPYDRGGLWTARFGGVRWVCGFTDEAALARFARARDAEDGREAARGPDPANRREGDGEAARGPDPANSQEAGPVWEFAALRGARLLDEIVPAMGEPAGVAVNIGDVDGAMLFPPVVGIVPEAVAVDAGEARDGERG
>NZ_CP050177.1|WP_167029810.1|3690478_3690937_+|hypothetical-protein
MSGPARWTVAAVLSVVAFALVLATVRAAPWGWLPKDDGDLWAVGTACGAVVAAAVLYALTWWNSRAAAPPVPAAPGRHVTQDADGRDDAVIEQTVGRRRPSVSGSDTAVGTPPSTPTGTPPGPGSAPVDSFTQRARGRGRSRIRQTGGDDHS
>NZ_CP050177.1|WP_167029807.1|3689390_3690359_-|hypothetical-protein
MSPRAPDDGPEPGEHTYLRARVKGRGHAYQVVNGTQNIAHHHHYDGLQAPLALPDLRLWIDRMAADYRTLATVGKGPVGRRRASSRTGELDALQEDLAATIEARKAGDQVRRLLAAGAAQYLYKSTRLPDGTLPESMMIDLAVFALWPLVQIPVPPAGWQDELARLTSPRLAQLVAQARRAGERGRPVPPDLFGRALAERPFTHGILALLEDLGDPRGGGACLTPLALAQGFSAPPRKAEPKAMLVWLFGAAALGGVGTSAASELAEQVWTWIHRQEHGTPDTPSVGGTDADDDGRPGSHHGTRPGYGHDPDDQGFLDDLFN
>NZ_CP050177.1|WP_167029804.1|3688637_3689282_-|hypothetical-protein
MIKHFLAAALITAALWAGSTAVLLLIGFGHVRTVRALMAVRRGLPRLPAGAVFHSRAGEVVMTWYNGARDADESLLLVRFSPPTLLRWRSGRGKSKAAVARRVNAELAWRTALVPLVTLPVFATTIWLAFTDSWLWIYATLYLVAHYALRAVSNRIFFFKFGFLSGVTAYLFLDRAELWHPSPTVAASLFFAMSVSAMALVAVAERSESRTADR
>NZ_CP050177.1|WP_167029801.1|3688005_3688641_-|hypothetical-protein
MSDHAGLRQAIGQAMAPFWYDREDRPRPDWVGEWSYWFVSAGNHLFDVLPGHEDDPRLVRYDDWTDSPENLPPSHCHGGPRALLDLDTPRTAESRRAADTWTAYHALAERFRTQDPRELTATASHEQPLIQTIESDPTLEERFTSNPALHFNEDQETYAARHAAAVLLTPTLLTLDGRWLEDGGPDHARMFNTYLDALPGETMVVRVLYHS
>NZ_CP050177.1|WP_167036882.1|3687144_3687522_+|DUF4259-domain-containing-protein
MGTWGAGNFDSDTAADHLGALADRLVSEVTEAMAGDPVELEPDEYWGTSVPCNLELLLLLVRQGWVGVTLPSPEVIRDWREVFLGVWERTIDDLGPDAAYKDERRVVLRETFERLAEAAEGGASL
>NZ_CP050177.1|WP_167029798.1|3685115_3686201_-|DNA-gyrase-subunit-B
MWIGSTGARGLHGLVFEVVGRAVNQVLSGGGGRVDVTLTPDGCVRVADDGPVAPFEATRDADRPNLDALLTRMPTGPHPPAWNNEAVIHFTAGLLVANALSSRLTAETQGTGARRTVQEYARGVPAAPPTPVERPNGHGTVIEFWPDPKIFETTSCSFALLAERFRQIAFLNRSLAISLTDERPATGPRAVSFRFPHGVRDFVAALHAETGSPLPPDLIGFERYDPRIAGTMEVALLWSDAHEQRLRSYANGRPTPQGGTHVDGFRDALATAVTAFAREQGLLAPTDPDPHTDRIGKGLTAVVSVKLDHPEFVGATRRQLSNPEVRNRIEESVREHLTNWFREHPKSAQEIATRITATPAA
>NZ_CP050177.1|WP_167029795.1|3684430_3685057_+|hypothetical-protein
MTGFRLIHRVPYYSQWESAALVAEFVSGVRGAAEDPLWLKSGADSAEDYAFWAPRMCGMACLRMALDHWGHEVPPSVPLVREAVEAGAYVRTEEQVKGLIYAPFAGWVARRWGLYAEVRPELVVGDVGSEIARGRVVLLSVHKSIRTLDPVPPQRGGHLVLAVGTDPDGVFLHNPSGLPGRSQEFHHVLWADLDRFFAGRGVVLGPHA
>NZ_CP050177.1|WP_167029792.1|3683829_3684222_+|divalent-cation-tolerance-protein-CutA
MSSVGASPGAGYVPRDALRRRPTVSEYLTVLTTTDSAEKAQTLAAGAVEARVAACAQVDGPIASVYRWEGTVRTDQEWRVLYKTTTDRYPALEAHIKAVHDYDTPEIIATPITHGSDAYLSWVSAETTTG
>NZ_CP050177.1|WP_167029821.1|3697112_3697565_+|hypothetical-protein
MEADSGTGPPAWHRTLEACGLVVLGRDASPSAPDVLTAIRAVTGVEVTPSVTVPESRADAAADLDRRWLATASALPLASGEGEFLVVPPGRGGSAVGWVRVHDPVGTGLPSRVAGATGSPEFLALSADGRHLCAVTSEEDEYWIVTRALP
>NZ_CP050177.1|WP_167029824.1|3700826_3701258_+|roadblock/LC7-domain-containing-protein
MTQRTTATDLDLDWLLDGLVDQVTGTRYAILLSDDGLAISRSRTIDRSDAERLAAIATGQQSLARGAGQLFGGGPVHQVIVEMAGLWLFVISAGHGTHLAVIASQDVDAELMSVAMHTLVQQVGQRLGTDARTPASDDAGRAG
>NZ_CP050177.1|WP_167029827.1|3701254_3701653_+|DUF742-domain-containing-protein
MRHWAEGFDDDDDDEQLVRPYTITSGRTAPERADLTLITLLTTVPDITPRGALAARRMQPEHRTILAMCREPKAVVEVAAELGLPVSLTKILIGDLVDSGQMWARAPRPFTRPGGLPDMTILEAVRDGLRQL
>NZ_CP050177.1|WP_167029830.1|3701633_3702233_+|ATP-binding-protein
MDYASSEHAAGRTDAAPLAVKILVAGGFGVGKTTLVGAVSEVAPLHTEEYLTLASVGVDDLEGLNSKFTTTVALDFGRITISDDLVVFLFGTPGQERFWFMWNDLVNGAMGAVVLVDTRRLDVSFASIDFFESRGIPFVVGVNCFHGVRDRSAEEIRAALALDPQVPLLLCDARDRGAGRDVLLALVDHLMASQSTSSV
>NZ_CP050177.1|WP_167029833.1|3702245_3702923_+|SMI1/KNR4-family-protein
MSTSTWAGVRDRVLGLAERPGADQVFGARGHGFRLGPVMDEVQLRSLEADLGVGLPASYRAFLLHVGGGGAGPDYGLMTPTPGDGGWQWRGTGLGFSAAPTTAEFAGRPFVAEALAGELAALEAREPGEDAYASEEEFRRAYAAWDARYEELYDAQEAGAVFLSEQGCGYSSLMVMTGPHRGAIWEDLRPMDRGIVPTGHNFGDWYRSWLERTERDLAGVRPTAT
>NZ_CP050177.1|WP_167029836.1|3702964_3703813_+|GlcNAc-PI-de-N-acetylase
MTDRPLTLMAVHAHPDDEATGTGGVLARYAAEGIRTVLVTCTDGGCGDGPGGVKPGDPGHDPAAVAAMRRDELAASCDVLKISDLEMLDYADSGMMGWATNDAPGAFWRTPVEVGAARLAELMRLYRPDVVVTYDENGFYGHPDHIQAHRITMAALEMIEAEPTPLTPKVYWTTMPRSAMRRFGETLREFGEEMPEPDPDEASPAFEIGLPDDEITTWVDATAFSDQKFDALAAHASQGENIFFLKMGRERFGGLMGMETFVRVKDTTGAALPENDLFAGLR
>NZ_CP050177.1|WP_167029839.1|3703919_3704675_-|cation-transporter
MATVSLGPGTARRDVLTRRIRLLVAATITYNAIEAVVAITAGTMASSTALIGFGLDSVIEVSSAAAVAWQFSAREHAVREAREATTLRIIALSFFALAAYVGVDAVRTLTGTGEADRSLPGIAIAALSLAVMPFLSAAQRAAGRELGSASAVADSRQTLLCTYLSGVLLTGLVLNAALGWSWADPVAALAIAVVAVKEGRDAWRGKGCCAPSSADFGTGPASAPADLRTVVTPPAGEADTPRAASACTCCG
>NZ_CP050177.1|WP_167029842.1|3704674_3705010_-|winged-helix-turn-helix-transcriptional-regulator
MLTLAPDIEVLARFGRALADPIRCRILLVLREAPAYPSDLADTLGVSRTRLSNHLACLRDCGLVVTVPDGRRTRYELADPRLGQALEHLLAAVVAVESDRTCADAATGECC
>NZ_CP050177.1|WP_167029845.1|3705174_3706440_+|APC-family-permease
MDGVRNPGAGGELKRRLGLSDAVLIGLGSMIGAGVFAALAPAARAAGSGLLPGLALAAVVAYCNATSSARLAARHPASGGTYVYGRERLGPFWGYVAGWAFVVGKTASCAAMALTVGTYAWPGRAHEVAVAAVVALTALSYTGVRKSARLTRVVVAVVLAVLAAVVVACLTGGTAQAARLDIGTDATAGGVLQAAGLLFFAFAGYARIATLGEEVRDPARTIPRAIPLALGITLVVYACVAVAVLAVLGPDRLAHATEPLTEAVRAAGAPALAPVVRVGAAVAALGSLLALILGVSRTTLAMARDGHLPRTLAAVHPRFGVPHHAEIAVGAVVAVAAATADLRGAIGFSSFGVLAYYAIANAAARTLSPSEGRPPRAVPVVGLAGCAALALALPLDSVLAGAAVLAVGAGVYGVRRARTAD
>NZ_CP050177.1|WP_167029848.1|3706626_3707298_+|hypothetical-protein
MPLPSNPLNPPNPADAHGTRLTERAIASVEADPHRLVLDHNKWAGPWIGAVAEPVPGDTLAAMVFPSGRPLPPSLRRWLAFDAGLLRRYGWFDAGLRFTPRTLGRLARDEFGDGWGAGFDTLSARFDECFLLPGGSDSRRVLATGEADEYGEYPVFALDVDDLPCVELMYPGLDVHLADTAGVISRREGGYSSLAEDATYGPRMRTHARNAFAGELHQICLPE

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Crispr_ID: NZ_CP050177_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_19

4335624-4335701

Orphan

Consensus_repeat	Method
CAGCCCGTCCGGCGTTTGAGGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_19

>merge|NZ_CP050177|19|4335624-4335701|CRISPRCasFinder
CAGCCCGTCCGGCGTTTGAGGACGTCCTTGACCCGCACGGGCAACGGGCCCCATCCAGCCCGTCCGGCGATTGAGGAC

>NZ_CP050177|19|14|4335624-4335701|CRISPRCasFinder
CAGCCCGTCCGGCGTTTGAGGAC	GTCCTTGACCCGCACGGGCAACGGGCCCCATC
CAGCCCGTCCGGCGATTGAGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167031144.1\|4336397_4338497_+\|ATP-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226482
NZ_CP050177.1\|WP_167031129.1\|4330197_4331163_+\|folate-binding-protein-YgfZ	unknown	unknown	gnl\|CDD\|223431
NZ_CP050177.1\|WP_167031155.1\|4342964_4344467_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP050177.1\|WP_167031138.1\|4334105_4335356_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|234945
NZ_CP050177.1\|WP_167031123.1\|4329008_4329581_+\|FABP-family-protein	unknown	unknown	gnl\|CDD\|378046
NZ_CP050177.1\|WP_167031161.1\|4345886_4346729_-\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|226309
NZ_CP050177.1\|WP_167031147.1\|4338946_4339903_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235736
NZ_CP050177.1\|WP_167037089.1\|4342058_4342385_+\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP050177.1\|WP_167031116.1\|4326245_4326974_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031126.1\|4329671_4330112_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP050177.1\|WP_167031120.1\|4327830_4328718_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167037080.1\|4327018_4327834_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031141.1\|4335731_4336364_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|188483
NZ_CP050177.1\|WP_167031132.1\|4331320_4331758_-\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP050177.1\|WP_167031152.1\|4341606_4342023_+\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422
NZ_CP050177.1\|WP_167031150.1\|4340271_4341603_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340391
NZ_CP050177.1\|WP_167031135.1\|4332768_4333776_+\|asparaginase	unknown	unknown	gnl\|CDD\|377601
NZ_CP050177.1\|WP_167031158.1\|4344466_4345750_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP050177.1\|WP_167037086.1\|4342365_4342968_+\|ATP/GTP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP050177.1\|WP_167037083.1\|4332037_4332661_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167031144.1\|4336397_4338497_+\|ATP-binding-domain-containing-protein	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	4.11041e-44
NZ_CP050177.1\|WP_167031129.1\|4330197_4331163_+\|folate-binding-protein-YgfZ	gnl\|CDD\|223431	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only].	6.76671e-54
NZ_CP050177.1\|WP_167031155.1\|4342964_4344467_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.28779e-31
NZ_CP050177.1\|WP_167031138.1\|4334105_4335356_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|234945	PRK01346, PRK01346, enhanced intracellular survival protein Eis.	1.48864e-148
NZ_CP050177.1\|WP_167031123.1\|4329008_4329581_+\|FABP-family-protein	gnl\|CDD\|378046	pfam08768, DUF1794, Domain of unknown function (DUF1794). This domain forms a beta barrel structure but the function is unknown. The GO annotation for this protein indicates that the protein has a function in nematode larval development and has a positive regulation on growth rate.	2.88707e-62
NZ_CP050177.1\|WP_167031161.1\|4345886_4346729_-\|L,D-transpeptidase-family-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	9.73301e-14
NZ_CP050177.1\|WP_167031147.1\|4338946_4339903_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|235736	PRK06196, PRK06196, oxidoreductase; Provisional.	4.62654e-111
NZ_CP050177.1\|WP_167031126.1\|4329671_4330112_+\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	1.21879e-31
NZ_CP050177.1\|WP_167031158.1\|4344466_4345750_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.97236e-66
NZ_CP050177.1\|WP_167037089.1\|4342058_4342385_+\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	2.29917e-26
NZ_CP050177.1\|WP_167031141.1\|4335731_4336364_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|188483	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator. Members of this family are TetR family putative transcriptional regulators that occur in genome contexts near proteins of the mycofactocin system. These include the precursor peptide (TIGR03969), a radical SAM peptide maturase (TIGR03962), and a putative carrier protein (TIGR03967). [Regulatory functions, DNA interactions].	2.95831e-12
NZ_CP050177.1\|WP_167031132.1\|4331320_4331758_-\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	2.43726e-75
NZ_CP050177.1\|WP_167031152.1\|4341606_4342023_+\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	2.18798e-12
NZ_CP050177.1\|WP_167031150.1\|4340271_4341603_+\|sensor-histidine-kinase	gnl\|CDD\|340391	cd00075, HATPase, Histidine kinase-like ATPase domain. This superfamily includes the histidine kinase-like ATPase (HATPase) domains of several ATP-binding proteins such as histidine kinase, DNA gyrase B, topoisomerases, heat shock protein 90 (HSP90), phytochrome-like ATPases and DNA mismatch repair proteins. Domains belonging to this superfamily are also referred to as GHKL (gyrase, heat-shock protein 90, histidine kinase, MutL) ATPase domains.	8.96567e-11
NZ_CP050177.1\|WP_167031135.1\|4332768_4333776_+\|asparaginase	gnl\|CDD\|377601	pfam06089, Asparaginase_II, L-asparaginase II. This family consists of several bacterial L-asparaginase II proteins. L-asparaginase (EC:3.5.1.1) catalyzes the hydrolysis of L-asparagine to L-aspartate and ammonium. Rhizobium etli possesses two asparaginases: asparaginase I, which is thermostable and constitutive, and asparaginase II, which is thermolabile, induced by asparagine and repressed by the carbon source.	3.34637e-134
NZ_CP050177.1\|WP_167037086.1\|4342365_4342968_+\|ATP/GTP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	1.4737e-31

>NZ_CP050177.1|WP_167031138.1|4334105_4335356_+|GNAT-family-N-acetyltransferase
MSLEVRTVTDAEFPDWHRALNTGFLRPPVSSDEVVASRRANSDLERTRGAFDEGRCVATFRSFAQELTVVGGATLAADAISNVTVTPTHRRRGLLGRMMGADLAEAKERGDAVATLIAAEYPIYGRFGFGPATWVTEWAIDVARTGLDPRRSGPDDGGRIDLVDIADVRKIGPELHDRFRVTQPGAIDRDERWWRRETGLDAAVLPRTEPYYAVYRSAAGEPEGLVRYSSDDAWGDSKTPLCTASVHSLIALTPAAERALWQYVCSIDWIATVRTGHRAPDDLVTRFLPDPRAARVVTNADYLWVRILDVVRALEARTYAVPGSLVLEVVDGTGLASGRFRLDASGTGDASATCTPTTVSPDVVLDVRELGALYLGDESALVLSALGALTEETPGAAARMDVLFCTSRRPWCPDIF
>NZ_CP050177.1|WP_167031135.1|4332768_4333776_+|asparaginase
MTSRTPAVPPGAAPAVSPRDPREAPPVLAEVVRSGFIEGHHRGTLVLLDADGGVEFALGDPGAPVFPRSSNKPMQAAAVLRAGLDLAGERLALAAASHSGEGFHLDLVRKMLAEHGLSAADLRTPPDLPLDPVEAETFLAGGGVRDRVVMNCSGKHAAMLAACVLNGWPTDTYLDPAHPLQRLVHTVVEEASGERVSAVGTDGCGAPLMAISLTGLARSFRHFVLAAPGTAERRVADAMRAHPEYVAGTRRPDTWLMRGVPGALSKMGAEAVQAVALPDGRALAFKIDDGGIRALGPVLARALELLGVTAEARDRIGHAPLLGGGAEVGVVRAAF
>NZ_CP050177.1|WP_167037083.1|4332037_4332661_+|ABC-transporter-substrate-binding-protein
MGTGQVMGAGQAGGGTPGVRPPVQRTGGEGVLPAPRPYDFTVLRLPELRALRRDSQRDEADLSYLRRLLQGRIDILRAELARRTAPPETPVLDRAPGAPGTSVVDRLSEILADAPSRHRSSARHVTLSTPRSEEYRLLAAETLAEVELSDLEARTDDELHAAMGRLVRNEQQISRRRHQLQRTADDCIGEIARRYRDGEAQVDDLLT
>NZ_CP050177.1|WP_167031132.1|4331320_4331758_-|D-tyrosyl-tRNA(Tyr)-deacylase
MRAVVQRVDGAKVSVVTDAGTETVGEIVGEGLCVLVGVTHEDTAEKAGQLARKLWSLRILEGEKSCSDVNAPLLVISQFTLYGDARKGRRPTWNAAAPGPVAEPLVDEVVARLRELGATVETGRFGADMRVSLTNHGPFTVQLEM
>NZ_CP050177.1|WP_167031129.1|4330197_4331163_+|folate-binding-protein-YgfZ
MKSPLLSLPGAVAAEGSDEGVAAHYGDLFREQRALADGTGLVDLSHRGVVTVTGDDRLAWLHLLLTQHVSELAPGEATEALVLSANGHIEHALYLVDDGATTWAHVEPGTREALVAYLESMKFFYRVEVADRTDDIALVHLPAGSIAEVPEGTAVRETPYGRDLFLPREGLEAYAAAHGPLAGILAYEALRVENHRPRLGFETDHRTIPHELGWIGSAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVLLPGHGTPIRLAADGAEGRQLGFITTSARHHELGPIALALVKRNVPVDAELMAGDTAAAQEAVVEV
>NZ_CP050177.1|WP_167031126.1|4329671_4330112_+|transcriptional-repressor
MVSTDWKSDLRERGYRLTPQRQLVLEAVDTLEHATPDDILGEVRRTASGVNISTVYRTLELLEELGLVSHAHLGHGAPTYHLADRHHHIHMVCRDCTNVIEADVAVAADFTRKLREDHGFTTDMKHFAIFGRCADCAARLAPDSEA
>NZ_CP050177.1|WP_167031123.1|4329008_4329581_+|FABP-family-protein
MIEIPSDLNPDLVPLAFLLGRWEGVGVFDFPGDEKANFGQEVTFSHDGRDFVEYVSHTWALDAEGNKLRPIESESGFWRIDKDRKVEVVMVRDQGVVEIWYGELADQKPQIDLVTDAVARTAAAGPYSGGKRLYGYVKSDLMWVGEKATPEVPLRPYMSAHLKKVVTPEQVAAWAKDLGDLPDDGIAFFK
>NZ_CP050177.1|WP_167031120.1|4327830_4328718_+|hypothetical-protein
MTEQIVPPRPEQGVPEQPGEIVPPPLPLTPPPTATPPPATPRPARPALRALARWTAAVLAFAALGAGTAFGVSGPERGDVPGLSTRSDGRWAYPKLTLPALPAGSPRPFTTGNAGEIHYADLRELLLPAPQGAVVDKKLAGGWVSSEQYLSEYNKGHRSALRTSLRDYGVRHIAARGWTMPDGTVSRVYLLQFRSVAFADAYQQERTERGEVTRTPLNESPADTLDEHWTGNSDVPETTTYVFEETKPYGENDIQVRQAYIVAGDTVALVFHQKKGGAPSAPFYQTVILQNQLLG
>NZ_CP050177.1|WP_167037080.1|4327018_4327834_+|hypothetical-protein
MNDESVKDEPVRDEPVNDGLPVASRGRARRLLGVVLPAVLVLGAVGGGVGYIGVTVQDADRSAVTEVWQKPDREPAPDPVAHAGKGRTDNELSRKLLPVPDGYRLGPDIGGDGNDSHFSARAATAMAKSLGDGLTGPARRSFDKAVDKLGVKGIALRTYTAYADDLVVQISLQQLRDPALVKSAFTRQARLMDAGEKGPDVEGHKKDATCMLVPEGDEESAESLSAMQCLAYDGDLVISVVAYGPYTFRDTAVADLLKEQLDHIADPGEYV
>NZ_CP050177.1|WP_167031116.1|4326245_4326974_+|hypothetical-protein
MEPKPPRRRGRTTLIVGVAALLGAVAGTATGYTIQADRPPTALPPLSQPGLAYPAKALPAGTKVKALSAEEDSQVRTDGDLRKLLLGKPEGVREAPSDYIVDGWSQLPLYTGEAERPSAMFGFLAGLDFRRVAATSWDQPGDHVTNIDLVQFGPGPNFGARDLADDQTAYSESLGGPGEPIKNSSNGHYWVFKARHEAGFLPYYARALAHRGDVVVDINIFDSKPIAASEIRDLAERQLERL
>NZ_CP050177.1|WP_167031141.1|4335731_4336364_+|TetR-family-transcriptional-regulator
MHEHTPGLRERKKRRQYQVISDTAITLFLAKGFDRVSVAEIAAAAEVSKPTLFRYFPAKEDLALHRFADHEDESARVVAGRPGGTGPLQALLGHLLDGLVRRDPVTGLSDHPQVLAFHRLLYGTPSLVARMAGYQQRSEAALAAALGGGIEGALGAGQVIAVLRVLALENWRRVAAGESADDVYPDAVAAAELAFGRLRTGLPDEPGEAQ
>NZ_CP050177.1|WP_167031144.1|4336397_4338497_+|ATP-binding-domain-containing-protein
MTAPDPDLARALDRERTYHQTCRTALTGMVDDAAEQVVTGENAFASGADAEVLGRHLRSRAKELRLEPDSPLFFGRLDFDAAAGDHSRQSYHIGRRRISEHPSAPPLVVDWRAPVSRAFYRASASDPQGVAVRRRFGWAPWSKGEPEDLTGLEDEYFATEGEEGSGPVGGAAPSGAILAGEIERPRVGPMRDIAATIQPEQDELVRSELGRSVCVQGAPGTGKTAVGLHRAAYLLYTYPQRIQRAGLLILGPNRTFLAYISEVLPALGEIGVRQSTVRDEIARHAVRTEDSAEAAAVKHDARMAEVLRRALYGRVSAPVEPLTVPDGSYRWRLGVGELEGIVDAVRAEAPPYATGRERVRSRAVRALQLQAERRAGPRSARWVRQVSASRGVTAYLDRVWPKATPEEVLAGLLADPGVPGGPCDGVLDPAEQRAVHRPRRSVPSARTARTLPWSAADLVLLDELAGLIERPEGYAHVVIDEAQDLSPMECRAIARRAEFGSLTVLGDLAQGTTPWAARSWPELLAHLGRSEAAVVPLTVGFRVPGAVVELANRLLGALDVDVPPSRSLRSDGELTIRQVGGGGELLSAVVRAVRAALAREGSVGVIADGPEAARLRTALAAAGVATAAADELGATAARVTVLPASEAKGLEYDHVVLVEPAAIAGAEARGLHQLYVALTRAVSRLDIVHHLALPGELGA
>NZ_CP050177.1|WP_167031147.1|4338946_4339903_-|SDR-family-NAD(P)-dependent-oxidoreductase
MTEHARITTPFDARSTAAEVIAGVDLTGRRAIVTGASSGIGVETARALAGAGAEVTLAVRDVAAGERTAEDITATTGNKNLAVAPLDLADQASVAAFTAAWDGPLHVLVNNAGVMMTPEWRTPEGWETQFATNHLGHFALTTGLHPALAAADRARVVALSSRGHVRAGVDFDDIHFLTRPYDPVVAYAQSKSAVVLFAVEANRRWAADGITVNAAHPGPILSNLTRHMSKADLDAAVAAEGAFKTPQQGAATAVLVATSPLVEGVGGRYFEDCEEAVRYVPGDAPGGVADHALDPEAAARLWRVSEEMIESSQASRSA
>NZ_CP050177.1|WP_167031150.1|4340271_4341603_+|sensor-histidine-kinase
MTPSPQDPLFWALILAVVLVGSGVLIRRYRLAARDAEERIRALRREIDIRDAEARHLVHTRVPTLVRGIWQGRDTGVPAAFHPALAGTPFLATHEAVLQQFREVATQATGRAEDGAKAAVSTVTRSMQGLLNDTTNAIDAMLRRHHDPAVLADANDIDHASSQLVRRAQAVNVLTGSWPGRQRRDSPLLDVVRGGVSKIRDYDRVKITGEPAYGVVSGSVEPVVLAIAELLDNAARHSEPGSDVQVWFVQAHNGVSVMIDDSGVGLKPEAKEAAARLLTGEEEVRLTQLGSRPKFGFPVVGVLAKRYGFRVSVDQESIYGGVRAGLFLPSALLVTVDSEEPRARPHGRTGDERAAGAAEADGKATEPADVAATSAPGAEDADEPLLRADGLPQRRRRTTARALPEERTVPAPPVRTSRNVGAFARGVRNAQDRRTSESEREDD
>NZ_CP050177.1|WP_167031152.1|4341606_4342023_+|roadblock/LC7-domain-containing-protein
MTNSVSKVGDLGWILDELLRTPHTLRAILLSSDGLMSAASEGVERDMADRMAAAVSGMQALSREAAEFADCEGAWEMTMIQYRGGYLFAMAAGDGSYLALSADGDADVENVSYAMEETVDRLGQQLGIASRVVTGAGS
>NZ_CP050177.1|WP_167037089.1|4342058_4342385_+|DUF742-domain-containing-protein
MRPYVVTGGRSAPSRNTFDAVTLVMILQSDLSRAGLTPEQRGVLNLCGQGALSVAEIASHLELPLSVLRIVLADLMESGHITTRSTILTARTLDRDILEAVLAGLQAL
>NZ_CP050177.1|WP_167037086.1|4342365_4342968_+|ATP/GTP-binding-protein
MDSKRFESAAGTHLRGDETAVKILVAGHFGVGKTTYVKTLSAIRPLLTEELMTTASEGTDDLSGVPGKTTTTVAMDFGRLNLSEDLVLYLFGAPGQERFWSVVADLSRGALGALVLADTRKLGDSYPVLGLMEDLGLPYAVAVNLFDGAPTYELPQLRDAMDLAPETPLVICDARDHASAKNALVELVTHLLTLTPEPAR
>NZ_CP050177.1|WP_167031155.1|4342964_4344467_+|cytochrome-P450
MTTPVTPDSSEAATPAAVTPDSPAPVTPDSPAAGTQASRAAEAEAAPAPAAAPAPAAPLGSLASDSPASVPAQAPAQVPPGGCPFAAQAAAGELGELPVIHGPEFSADPHATYDKLRATAPIVPVEIAEGMYGYLTTTYRAALHLLRNTPDKFAKDPRHWVALRTGQVPPGTPSAAMMEPRDNALWMDGMPHTRLRKSITDTLDLIDTHALVATVTRIADTLIDAMAPRAEFDLVADFSDPLPMQVLIELFGCPPDLGRRIILAIGRLFDAGADAAEASAEVATACLELTRLKRAEPGNDATSWLLTHPAQLTDVEMIQQILLVIGAATTPSSNLIANALLLMIDDERFSGSVYEGVHSVAEAMDQVLWEDPPLANYSPLYARRTETYEGVRLEPGVPILVSFAAANSDPALNGATHRRAGNRAHLAFSAGVHGCPAPDLAGIITETAVERVLDRLPDLRLACDRKDLTRRPGTFHSGWTALPVVHPAVVPLAAPHPGVH
>NZ_CP050177.1|WP_167031158.1|4344466_4345750_+|cytochrome-P450
MDTQPTSTADPAAPAAGCPFRIDPAASDIHAEAARLRAGGPAVQVELPGGVVAWSVTETALGKRLLTDDRVSKDAHQHWPAYIRGEIPEGWPLRLWVDVRNALSAYGDEHTRLRKLIGPAFSARRVRALAPAIESIVAELLDELEASPAGPEGIVDLRARFAWVLPLRVVNTLLGVPEEMHEAFRTTMGGLFATDRTPEEAVAGVMAAYEQMAALVAVKQRNPGEDVTSDLVNAKDDETGTGLAPQELLDTLLLLIGAGHETTVNLLDHAIADLLDHPEQLAMAKDGRVSWGDVVEEALRHQAPLASMLMRFPVSDIEDEDTGLTFRQNEPIVMNYGAMGRDPAVHGDDAERFDVTRTTRKEHLAFGFGVHYCLGAELARVEARIALSALFDRFPGLALAGPASELRPQESFISNGHRELPVRLTRG
>NZ_CP050177.1|WP_167031161.1|4345886_4346729_-|L,D-transpeptidase-family-protein
MPATPETPAAPPRIRPRVHPRVRPRGRTRPGLHLLTLAAVTALTLGTVTGCGGAAGARDRPSPPPATTAAKNAPAAAPTPAAETLPRQLPGLGARTLADVPGNAGQVVVVTGADKNSPRSEAVLYERSPAGWRAGDTWAAHNALRGWTDNHHAGDLRSPIGVFGLTDAGGRRGDPGTKLPYDRSGAFTIGGTGFEGEPLAGSFDYVVAINYNRQPGLTPLDWTRPLGDSKGGGIWFHVDHGGPTHGCVSLSEAHMKDLLRTLDPARHPVVVMGDATSLAR

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Crispr_ID: NZ_CP050177_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_20

4457118-4457205

Orphan

Consensus_repeat	Method
GTCCTCAATCGCCGGACGGGCTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_20

>merge|NZ_CP050177|20|4457118-4457205|CRISPRCasFinder
GTCCTCAATCGCCGGACGGGCTTGGTTTGTGCGTCGGCCGGTCGCGCGGGCGCGGCTCACCGATGTCCTCAAACGCCGGACGGGCTTG

>NZ_CP050177|20|15|4457118-4457205|CRISPRCasFinder
GTCCTCAATCGCCGGACGGGCTTG	GTTTGTGCGTCGGCCGGTCGCGCGGGCGCGGCTCACCGAT
GTCCTCAAACGCCGGACGGGCTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167031435.1\|4454338_4455322_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP050177.1\|WP_167031460.1\|4466377_4468915_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP050177.1\|WP_167031449.1\|4461352_4462648_+\|threonine-synthase	unknown	unknown	gnl\|CDD\|236065
NZ_CP050177.1\|WP_167031443.1\|4458384_4459797_-\|trehalose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|340820
NZ_CP050177.1\|WP_167031429.1\|4452074_4453019_-\|1-phosphofructokinase-family-hexose-kinase	unknown	unknown	gnl\|CDD\|274464
NZ_CP050177.1\|WP_005315736.1\|4463321_4463525_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP050177.1\|WP_167031426.1\|4451141_4451993_-\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_CP050177.1\|WP_167031441.1\|4457457_4458306_+\|trehalose-phosphatase	unknown	unknown	gnl\|CDD\|319767
NZ_CP050177.1\|WP_167031451.1\|4462677_4462956_+\|MoaD/ThiS-family-protein	unknown	unknown	gnl\|CDD\|340594
NZ_CP050177.1\|WP_167031420.1\|4448133_4449915_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP050177.1\|WP_167031446.1\|4460056_4461043_-\|glucosyl-3-phosphoglycerate-synthase	unknown	unknown	gnl\|CDD\|237556
NZ_CP050177.1\|WP_167021943.1\|4459868_4460018_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031432.1\|4453184_4454339_-\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434
NZ_CP050177.1\|WP_167031454.1\|4463834_4465460_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP050177.1\|WP_167031457.1\|4465579_4466158_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP050177.1\|WP_167031438.1\|4456838_4457114_+\|DUF3263-domain-containing-protein	unknown	unknown	gnl\|CDD\|378688
NZ_CP050177.1\|WP_167037128.1\|4455612_4456839_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP050177.1\|WP_167031423.1\|4450126_4451134_+\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|271149
NZ_CP050177.1\|WP_167031397.1\|4446748_4447180_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|181730
NZ_CP050177.1\|WP_167031400.1\|4447225_4447819_-\|flavin-reductase	unknown	unknown	gnl\|CDD\|376575

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167031435.1\|4454338_4455322_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	5.30057e-59
NZ_CP050177.1\|WP_167031460.1\|4466377_4468915_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	4.28197e-51
NZ_CP050177.1\|WP_167031449.1\|4461352_4462648_+\|threonine-synthase	gnl\|CDD\|236065	PRK07591, PRK07591, threonine synthase; Validated.	0
NZ_CP050177.1\|WP_167031443.1\|4458384_4459797_-\|trehalose-6-phosphate-synthase	gnl\|CDD\|340820	cd03788, GT20_TPS, trehalose-6-phosphate synthase. Trehalose-6-Phosphate Synthase (TPS, EC 2.4.1.15) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.	1.79562e-135
NZ_CP050177.1\|WP_167031429.1\|4452074_4453019_-\|1-phosphofructokinase-family-hexose-kinase	gnl\|CDD\|274464	TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family. This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.	2.10321e-109
NZ_CP050177.1\|WP_005315736.1\|4463321_4463525_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	6.48086e-35
NZ_CP050177.1\|WP_167031426.1\|4451141_4451993_-\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	5.90821e-113
NZ_CP050177.1\|WP_167031441.1\|4457457_4458306_+\|trehalose-phosphatase	gnl\|CDD\|319767	cd01627, HAD_TPP, trehalose-phosphate phosphatase similar to Escherichia coli trehalose-6-phosphate phosphatase OtsB and Saccharomyces cerevisiae trehalose-phosphatase TPS2. Trehalose biosynthesis in bacteria is known through three pathways - OtsAB, TreYZ and TreS. The OtsAB pathway, also known as the trehalose 6-phosphate synthase (TSP)/ Trehalose-6-phosphate phosphatase (TPP) pathway, is the most common route known to be involved in the stress response of Escherichia coli. It involves converting glucose-6-phosphate and UDP-glucose to form trehalose-6-phosphate (T6P), catalyzed by TPS, the product of the otsA gene, this step is followed by the dephosphorylation of T6P to yield trehalose and inorganic phosphate, catalyzed by a specific TPP, the product of otsB gene. This OtsAB (or TSP/TPP) pathway, is also the most common route known to be involved in the stress response of yeast In Saccharomyces cerevisiae, the corresponding enzymes, TPS1p and TPS2p, form a multimeric synthase complex together with additional regulatory subunits encoded by Tsl1 and Tps3. Trehalose is a common disaccharide accumulated by organisms as a reservation of carbohydrate and in response to unfavorable growth conditions. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.41199e-33
NZ_CP050177.1\|WP_167031451.1\|4462677_4462956_+\|MoaD/ThiS-family-protein	gnl\|CDD\|340594	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins. CysO, also termed 9.5 kDa culture filtrate antigen cfp10A, together with CysM (Cysteine synthase M), forms a protein complex CysM-CysO that represents a new cysteine biosynthetic pathway in Mycobacterium tuberculosis. The replacement of the acetyl group of O-acetylserine by CysO thiocarboxylate to generate a protein-bound cysteine is catalyzed by CysM in a pyridoxal 5?-phosphate (PLP)-dependent manner. The family also includes QbsE that functions as the sulfide donor for the biosynthesis of thioquinolobactin in Pseudomonas fluorescens. A JAMM motif protein QbsD catalyzes removal of the carboxy-terminal dipeptide from QbsE. Both CysO and QbsE are similar to prokaryotic sulfur carrier proteins such as ThiS and MoaD, containing the beta-grasp ubiquitin-like fold.	1.34173e-43
NZ_CP050177.1\|WP_167031420.1\|4448133_4449915_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.33203e-42
NZ_CP050177.1\|WP_167031446.1\|4460056_4461043_-\|glucosyl-3-phosphoglycerate-synthase	gnl\|CDD\|237556	PRK13915, PRK13915, putative glucosyl-3-phosphoglycerate synthase; Provisional.	1.68045e-165
NZ_CP050177.1\|WP_167031432.1\|4453184_4454339_-\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	2.59672e-152
NZ_CP050177.1\|WP_167031454.1\|4463834_4465460_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP050177.1\|WP_167031457.1\|4465579_4466158_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	8.55377e-23
NZ_CP050177.1\|WP_167031438.1\|4456838_4457114_+\|DUF3263-domain-containing-protein	gnl\|CDD\|378688	pfam11662, DUF3263, Protein of unknown function (DUF3263). This family of proteins with unknown function appears to be restricted to Actinobacteria.	4.56488e-31
NZ_CP050177.1\|WP_167037128.1\|4455612_4456839_+\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.7057e-49
NZ_CP050177.1\|WP_167031423.1\|4450126_4451134_+\|carbohydrate-binding-protein	gnl\|CDD\|271149	cd04083, CBM35_Lmo2446-like, Carbohydrate Binding Module 35 (CBM35) domains similar to Lmo2446. This family includes carbohydrate binding module 35 (CBM35) domains that are appended to several carbohydrate binding enzymes. Some CBM35 domains belonging to this family are appended to glycoside hydrolase (GH) family domains, including glycoside hydrolase family 31 (GH31), for example the CBM35 domain of Lmo2446, an uncharacterized protein from Listeria monocytogenes EGD-e. These CBM35s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. GH31 has a wide range of hydrolytic activities such as alpha-glucosidase, alpha-xylosidase, 6-alpha-glucosyltransferase, or alpha-1,4-glucan lyase, cleaving a terminal carbohydrate moiety from a substrate that may be a starch or a glycoprotein. Most characterized GH31 enzymes are alpha-glucosidases.	4.73094e-12
NZ_CP050177.1\|WP_167031397.1\|4446748_4447180_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|181730	PRK09256, PRK09256, aminoacyl-tRNA hydrolase.	1.87588e-53
NZ_CP050177.1\|WP_167031400.1\|4447225_4447819_-\|flavin-reductase	gnl\|CDD\|376575	pfam01613, Flavin_Reduct, Flavin reductase like domain. This is a flavin reductase family consisting of enzymes known to be flavin reductases as well as various oxidoreductase and monooxygenase components. VlmR is a flavin reductase that functions in a two-component enzyme system to provide isobutylamine N-hydroxylase with reduced flavin and may be involved in the synthesis of valanimycin. SnaC is a flavin reductase that provides reduced flavin for the oxidation of pristinamycin IIB to pristinamycin IIA as catalyzed by SnaA, SnaB heterodimer. This flavin reductase region characterized by enzymes of the family is present in the C-terminus of potential FMN proteins from Synechocystis sp. suggesting it is a flavin reductase domain.	6.19964e-45

>NZ_CP050177.1|WP_167031438.1|4456838_4457114_+|DUF3263-domain-containing-protein
MPPPAPEDAAPSPSSPSSELSERDRAVLAMERRGWPGPGAKERAIREGLGISPTRYYQLLGALLDDPRAAAHDPVTVNRLRRLRTTHRARR
>NZ_CP050177.1|WP_167037128.1|4455612_4456839_+|extracellular-solute-binding-protein
MGMTMALAGCGATGSSGDVTLKLVAADYGTGPANSSEKYWSALAKDFETRNPGIKVDVDVRSWKTVDADVASMVKRGEAPDIAQIGAYADYVKQDALYSADELLNIPTQANFLTQLSDAGKVNRIQYGLPFVASTRLLFYNEKLFDEAGLSAPKTWADIESDAKALKAEGVTTPFALPLGSEEAQAETMMWLLSGGGGYTETADDSYSIDSAQNVETFKWLQKNLVGDGLTGPVAPGKLDRAAAFTAFNAGKVGMLNGHPTLMQEAEKAGVKVGMVPLPGINGKSKSSMGVADWMMAFKQPGHREAAGKFLDFVFSDKNVLDFVGQYDLLPVTYSANDAMAKDPRYADLSKFQDALPTSQLPPVGKTSWAKVSESIKKNIGKAVEPGVNPSTVLGAIARDAVTAEAAE
>NZ_CP050177.1|WP_167031435.1|4454338_4455322_-|ROK-family-protein
MRHVIALDVGGTGMKAALVGADGALLYEARRATGRERGPDAVVETILDFAADLRAHGVEHLGASAVAAGVAVPGIVDAESGTAVYASNLGWRDVPLRDLLGKRLGDVPVALGHDVRTGGLAEGRLGAGRGADRFFFVGLGTGIAGAIGIEGTIEAGAHGYAGEIGHVVVRPDGPECGCGQRGCMEAIASAAAVTRAWAAASGDPAADAADCARAVDAGDPEAVRVWLDAVDALAAGLVTALTLLDPRTVIVGGGLAEAGETLFTPLRAAVERRVTFQKVPEIVPAALGDTAGCLGAGLLAWDLLAGPGTDHSDGSGRSDRLSTEVSA
>NZ_CP050177.1|WP_167031432.1|4453184_4454339_-|N-acetylglucosamine-6-phosphate-deacetylase
MAARAKSTVLTGGRVVLPTGTVDGGRVIVEGTRITGAAPADAVPLDLSGHWVVPGFVDMHNHGGGGASFTSGSVDEVLKGVRTHLEHGTTTLVASLVTGEADFLAQRASVLSELVEQGDLAGIHFEGPFISPCRKGAHSEELLRDPDPAAVRKLVDAGRGAVRMVTLATELPGGIESVRLLAELGVIAAIGHTDATYEQTAEAIDAGATVATHLFNAMPPLGHRAPGPIAALLEDERVTVELINDGTHLHPAALELAFHRAGAGRVAFITDAMDAAGFGDGLYQLGPLAVEVKEGVARLVEGGSIAGSTLTLDTAFKRAATVDRLPVGDIVQAISANPAKLLGLYDRVGSLEPGKDADLVVLDADFAVKGVLRRGAWVIQPQLG
>NZ_CP050177.1|WP_167031429.1|4452074_4453019_-|1-phosphofructokinase-family-hexose-kinase
MILTVTLNTALDITYRTPRLVPHTTHRVSEVIERPGGKGLNVARVLAALGHETVVTGFAGGRTGDVLRELLPLAPGIPAYAPPVDALVPIAGATRRTVAVVDGSTGDTTQLNEPGPVVSPAEWAAFLARYEELLAGADAVALCGSLPPGIHVGAYADLVRGARGAGVPVLLDTGGEPLRRGIAARPDLVKPNADELARLTGSREPLRATRDARRRGAHAVVASLGPDGVLAATPDGVWRACPPAPAKGNPTGAGDSVVAGLLSALVERLPWPDRLTRAVALATATVLSPAAGEFDAGAYGELLSRVRVTEQPPQ
>NZ_CP050177.1|WP_167031426.1|4451141_4451993_-|class-II-fructose-bisphosphate-aldolase
MPLVSTGELVTAAAAAGHGVAAFNVITLEHAEAIAAGAERAGVPAILQISENAVAFHGGRLGPVAAAATAVARAASVPLSLHLDHVESADLLRAAPVAGFSSVMFDASKLPYAENLKATAEAVRWGHDHGVWVEAELGAVGGKDGGAPPDAHAPGVRTDPAEAVVFVAETGVDALAVAIGSSHAMTARTATLDHALIADLRAAVPVPLVLHGSSGVPDDEIRRAIAAGMVKINVGTALNSAYTAAVRDHLTSRPAVVDPRKYLAPAREAMTGTVAGFLRVVGA
>NZ_CP050177.1|WP_167031423.1|4450126_4451134_+|carbohydrate-binding-protein
MTAGNNGASTPEDDDPFGYLYEDGQAAAAQQRRQGGYGYPGPAAQPGVPRTSYNQVRAVGERQYGQQPQVPQQQGYGQQQQYGQASYAGYGQQPNGPAPTGQYGAAPAPHASEATSRVPLQRGGGRGRGPNTRGLLIGAVAVVAVVVIGITAALVSGGGDEDKNNDAAPTAAPSVGESDQPSEKPSQDAGDKPPAELPKQDAATLQLTPPAAVSSDIPGAKGTNGAYVSLNGAGAAATWKVDVPKAGAYTLFVTYGVPGKDAKTSLFVNSDERRDINMKNFANAPEGAWDKGWTVTYAYVNLDKGSNTFKISCEAGDQCETVLDQLELKAGQVKR
>NZ_CP050177.1|WP_167031420.1|4448133_4449915_+|diguanylate-cyclase
METESEPYVRLATLRQLHQAVAELNTARSLADTLQTVADGIVKGLGYELACVNVVQADGDLVVAAFAGSAAAEALITGRVGSRASWERRLVMGEPWGSLRYIPHTEGWVLLEDDVPQWHTEGPDPRFEDEWHPADRLYAPMYASGSGNDLLGVISVDRPRGGRRPGAWGREALQMYASQAAIAISNARLRANMQRALVRLEREQAALRASEESFRQAFEYAPSGMAIAEMGGDQHGRLLRTNDALCRLLGRPASAMRRYSFSDMVHPEDIGTLLRTSAEGGRAELRLARRDGSYVWVSLRNSVVADTTDGPRFLLTHVEDIEERKSRELQLAHRASHDSLTGLPNSAELRARLSARLCSRPHAMRETAVEALDKAYGGYDGMVRYEPSYEARDGYDGRDTRDTYEPYETYESYEGYDGYSETAGERGGLRAGGFAAPGSPLDHHVHMVAPGDVAGDGTDDGTKGLAVLFCDLDGFKSINDRFGHNTGDAVLIEVARRLTTGVRDGDTVARLGGDEFVVLADGLGAADAADLAVRLRNAIIPPIRVDGRAVRVGASFGIGWASCGMSVEEVLKSADQRMYIEKRSRNKVHRRAG
>NZ_CP050177.1|WP_167031400.1|4447225_4447819_-|flavin-reductase
MPQTTPPTTSPDSRAPRTVPVPHPEGVSNDEFRAALSRLAAGVVLVTAHEEALSADGPGGQDAGMTATAFLSVSLDPPLVLVSVRNGSRMDDLLDEQPLWGVSLLTESQRHIAGRFAMKGRISDRLLFEDIPYRRGEVSGAPLVGGALAVLECRTEQRVVAGDHTLVIGRVLTAELPSVEGGPLTYFQGRYRTLGKG
>NZ_CP050177.1|WP_167031397.1|4446748_4447180_+|aminoacyl-tRNA-hydrolase
MSGPSHVIRGSVSLPEAELMWRFSRSSGPGGQHVNTSDSQVELRFDLAKTEALPPVWKERALERLENRLVNGVITVRSSEHRSQWRNRETAAVRLTALLAEATAPPPRARRKGKIPRGLNERRLREKKQRAETKRGRTGRDWT
>NZ_CP050177.1|WP_167031441.1|4457457_4458306_+|trehalose-phosphatase
MGSPENPLPTPTTTTGTAGLTALLAHPAKAVVALDFDGTLADIVPDPEQARAHPRALPALAALAPHVASIVVITGRPAEVAVRFGGFAGVPGLERLVVLGHYGAERWDAATGTVTAPDPHPGVAAARAELPALLDGLALGQGTWIEEKGQAFAVHTRRATDPQAAFDALRTPLAGLATRHGLVLEPGRMVLELRPPGVDKGVALTRYVDESGAETILYAGDDLGDLPAYTAVDALRANGHPGLLVCSGTEVPELSTRSDLTLPGPAAVADFLAALAEAVSAT
>NZ_CP050177.1|WP_167031443.1|4458384_4459797_-|trehalose-6-phosphate-synthase
MVSEQAAQVLVASNRGPVSYTLRDDGALEARRGGGGLVSGLSAIGPDTDAVWVCAALGDGDHEAVRRTGGRLDPEDTGGQRVRMLGIAPDVYAGAYNGVANSTLWFVHHLLYQTPLEPSFGAEFRAQWGAYEAYNRAFAEALADEAADGASVLVQDYHLALVPGMLRALRPDLRIGHFSHTPWAPVDYFRLLPDDIARQLLRGILGADRAAFLTHRWADAFTACCTELLGGTGSTRIGVHGLGADADFLRERAHRPDVGERIVSLREEIGGTDRRTIVRVDRTELSKNIVRGLLAYRQLLTDHPEWRERVVHVAFAYPSRQDLSVYRDYTAEVQRVADAINLDFGTDGWLPVVLHVKDDFARSLAAYRLADVALVNPIRDGMNLVAKEIPVVSENGCVLVLSREAGAYEELGDDALVVNPYDISATATALHEALTMPHDERAERTKRLAAAATALPPSQWFLDQLEALRG
>NZ_CP050177.1|WP_167021943.1|4459868_4460018_-|hypothetical-protein
METSLSMWFLAAAHSGATAERLWLLGGMAVALTGAGVVALAAARGRRGD
>NZ_CP050177.1|WP_167031446.1|4460056_4461043_-|glucosyl-3-phosphoglycerate-synthase
MLEEVERWLTRRSWSVADRSLDRLLAAKTARGTTVSVVLPALDEESTVGAIVSVVRRELMERAPLVDELVVIDSGSSDATAKVAAEAGARVVHRDDILPRLPALPGKGEVLWRSLLVTGGDVVCFVDADLREFSADFVTGIVGPLLTEPDVQLVKAMYDRPLGSRGAPGASAGPSAGQGGRVTELVARPLLNLHWPLLAGFVQPLGGEYAARRTLLERLPFPVGYGVELGLLVDALHTVGLDALGQVDVGTRLHRHQDDRALGRMAAAIYRTAQLRLSRSHLGAHLVRPELTQFERGENGFVPRTYDVDTEERPPMREIAEYTAGRAA
>NZ_CP050177.1|WP_167031449.1|4461352_4462648_+|threonine-synthase
MSVQTVPTPGVTPGAVDLGPAAALSCRECGERFDLGPIFACASCFGPLEVAYDLPSGSPEELKKRIAEGPDNIWRYAPLLPVPADVATKPNINPGFTKLVKADNLARELGVTGGLYVKDDSGNPTHSFKDRVVAIAVEAARAFGFTTLSCSSTGNLAGAVGAAAARAGFRSCVFIPHDLEQGKVVMAAVYGGELVGIEGNYDDVNRFCSELIGDPLGEGWGFVNVNLRPYYGEGSKTLAYEICEQLGWELPDQLVIPIASGSQLTKIDKGLQELIKLGLVEDKPYKIFGAQAEGCSPVSAAFKAGHDVVRPQKPNTIAKSLAIGNPADGPYVLDIARRTGGAVDDVNDEQIVDAIKLLARTEGIFAETAGGVTVGVTKKLIDAGLLDPALTTVVLNTGDGLKTLDAVAPTTGPTATIRPSLDAFRDAGLAH
>NZ_CP050177.1|WP_167031451.1|4462677_4462956_+|MoaD/ThiS-family-protein
MSVKVRIPTILRTYTGGQAEVPAEGETLSEVIQSLEANHPGISARVLDDDGKLRRFVNVYVNDDDVRFEQGLQTATPAGAGISIIPAVAGGC
>NZ_CP050177.1|WP_005315736.1|4463321_4463525_+|cold-shock-protein
MAQGTVKWFNAEKGYGFIAVDGGADVFVHYSAIQMDGYRTLEEGQRVEFEISQGQKGPQADMVKLAV
>NZ_CP050177.1|WP_167031454.1|4463834_4465460_+|chaperonin-GroEL
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIEKAVEAVSGALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQTFGLELELTEGMRFDKGYISAYFATDMERMESSLDDPYILIVNSKIGNVKDLLPLLEKVMQSGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLNDIAILTGGTVISEEVGLKLENAGLDLLGRARKVVITKDETTIVDGSGESDQVAGRVNQIRAEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQASSVFEKLELEGDEATGANIVKLALEAPLKQIAVNGGLEGGVIVEKVRNLPIGHGLNAATGEYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAGGAPGGMPGGDMDF
>NZ_CP050177.1|WP_167031457.1|4465579_4466158_-|Uma2-family-endonuclease
MTPSPADHAQMSVEDFEQIARTAPKTVKLEFVNGKLEVKPVPDGDHDEIVLWLQTLCMQHRPELGLYAERGLRIEAYRKGRAVPDGVLAPRRHFVGHGLWSDPEGVLMVVEVTSYDSDTDRRDRNEKRDGYAAAGIPVYLLIDRDNGTLTVYSEPLNGVYQRQPSYPFGTDVQLPEPASLTLETEELTAYIR
>NZ_CP050177.1|WP_167031460.1|4466377_4468915_-|SpoIIE-family-protein-phosphatase
MVDAEGGTGATVPGDDGRPVASGSPHDGPAQTALDVVGAAVAVIDARGAVIGWTRAAEELLGYRAADVVDRSATRLLQDSPADRSGAPDPLVPTWPARVRAGEPWSELVELRHQEGHGVHVTLHASPLAGPDGRTDWFVSAAPLSASSFRPTRDGVVVRSLLEGAPIGLSIWDTDLRCVWLNSTVERQSGVLRHERIGLRVTESLPGFDTDAVEAAMLQVLRTGTPVIDHEFRWIAQDLHEERAFSSSFFRLDGLDGRPLGVCSIAVDITSSWARERLAVLSEAGTRIGTTLDVMHTAQELADVAVPLLADYTSVDLTEALPLGGEPLERLESADGTVPVFRRCGVASIHEGNPESLWSIGEAVYVPTVSPFMSAMTTGKSQFEPIIRTGPGTWVENDPGRRRVIEETGVHSIIVVPLRARGTILGVVVFSRNDTITPFSRDDLLLAEELAARASLSLDNALRYTRERTASLALQRNLLPRHLSGGHAVDVAAQYLPADLHDGVGGDWFDVIPLSGGRVALVVGDVVGHGINAAATMGQLHTAVHTLADMDLPPDELLAHLDDLVVRLTEEDAEPRDEDFSTPVMGATCVYAVYDPVTRRCTMARAGHPPPAIVFPDGTVTFPELPAGSPIGLGLLSFQSVEMELPEGSVIALYTDGLVETREADIDVGLGRLGASLARTGGRGTPLDEVCAEVVGTMVSKAPSQDDVALLLARTRSLPPDHVVTWVLPTDPALVSNARALAVAKLSSWGLGQLAPTVELIVSELVTNAIRYGAGPIRLRLIRHRALVCEVFDSDDRSPRLRHARAEDEKGWGLFLVAKLSHRWGTRTAPGGKIVWAELELPLGA

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Crispr_ID: NZ_CP050177_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_21

4492141-4492763

Orphan

Consensus_repeat	Method
CCGCGTGCCCGCAGGTCCGCGAGACC	CRISPRCasFinder

10 spacers

The CRISPR arrays of NZ_CP050177_21

>merge|NZ_CP050177|21|4492141-4492763|CRISPRCasFinder
CCGGCGACCCGCAGGCCCGCGAACCTCGCGGCCCGCCGCGCGGCGGTTACTCACCGGTCCGCGAGGCCGCGCGCCCGCTGGCCCGCAGATTCGCGAGACTGCGGAACCGCGAACCTCGCCCCTGCCGCGCAGCGGTTACCCGCCAGTCCGCGAGGCCGCGTGCCCGCAGGTCCGCGAGACCGCGAACCTCACCCCCCGCCGGCCAGCGCGACCGCGTGCCCGCAGGTCCGCGAAACCACGGACCTCGCCACCCGCCGCGCGGCGGTTACCCCGCCGGCCCATGGGACCGCGCGCCCGCGTGCCCGCTGGCCCGCGGATCCGCGCGACCGCGGAACCGCGAACCTCGCCGCCTGCCGCGCAGCGGTTACCCGCCAGCCCGTGGGGCCGCGTGCCCGCAGATCCGCGAGAGCGGTTACCCGCAGCTAGCGCGACCGCAGGCCCGCAGGGCCGCGAATTTCGCCGCCCGCCGCGCGGCGGTTACTCGCCGGCCCGCGAGGCCGCGCGCCCGCGTGCCCGCCGACCCGCGAGACCGCAGACCCGCGAACCTCGCCGCCCGCCGCGCAGCGGTTACCCGCCGCGGCCAGCGCGATCGCCAGCCAGCGCGACCGCAGGCCCGCAGGCCC

>NZ_CP050177|21|16|4492141-4492763|CRISPRCasFinder
CCGGCGACCCGCAGGCCCGCGAACCT	CGCGGCCCGCCGCGCG
GCGGTTACTCACCGGTCCGCGAGGCC	GCGCGCCCGCTGGCCCGCAGATTCGCGAGACTGCGGAACCGCGAACCTCGCCCCTGCCGCGCA
GCGGTTACCCGCCAGTCCGCGAGGCC	GCGTGCCCGCAGGTCCGCGAGACCGCGAACCTCACCCC
CCGCCGGCCAGCGCGACCGCGTGCCC	GCAGGTCCGCGAAACCACGGACCTCGCCACCCGCCGCGCGGCGGTTACC
CCGCCGGCCCATGGGACCGCGCGCCC	GCGTGCCCGCTGGCCCGCGGAT
CCGCGCGACCGCGGAACCGCGAACCT	CGCCGCCTGCCGCGCAGCGGTTAC
CCGCCAGCCCGTGGGGCCGCGTGCCC	GCAGATCCGCGAGAGCGGTTACCCGCAGC
TAGCGCGACCGCAGGCCCGCAGGGCC	GCGAATTTCGCCGCCCGCCGCGCG
GCGGTTACTCGCCGGCCCGCGAGGCC	GCGCGCCCGCGTGCCCGCCGAC
CCGCGAGACCGCAGACCCGCGAACCT	CGCCGCCCGCCGCGCAGCGGTTACCCGCCGCGGCCAGCGCGATCGCCAGC
CAGCGCGACCGCAGGCCCGCAGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167031500.1\|4487938_4490497_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|379300
NZ_CP050177.1\|WP_167031527.1\|4500546_4501299_-\|futalosine-hydrolase	unknown	unknown	gnl\|CDD\|350166
NZ_CP050177.1\|WP_167037137.1\|4481287_4483273_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226482
NZ_CP050177.1\|WP_167031521.1\|4499242_4499626_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP050177.1\|WP_167031489.1\|4483756_4483960_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031484.1\|4479946_4480117_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031487.1\|4480190_4480895_+\|copper-homeostasis-protein-CutC	unknown	unknown	gnl\|CDD\|225684
NZ_CP050177.1\|WP_167037143.1\|4493837_4494812_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|181818
NZ_CP050177.1\|WP_167031530.1\|4501363_4501852_-\|DUF2771-domain-containing-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031518.1\|4498684_4499017_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031506.1\|4492806_4493691_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NZ_CP050177.1\|WP_167031524.1\|4499656_4500550_-\|1,4-dihydroxy-6-naphthoate-synthase	unknown	unknown	gnl\|CDD\|270353
NZ_CP050177.1\|WP_167031503.1\|4490836_4492006_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP050177.1\|WP_167031509.1\|4495743_4496829_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP050177.1\|WP_167031515.1\|4498046_4498742_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223620
NZ_CP050177.1\|WP_167031512.1\|4496825_4497860_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP050177.1\|WP_167037140.1\|4484114_4485350_+\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|172015
NZ_CP050177.1\|WP_167031481.1\|4477479_4479831_-\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP050177.1\|WP_167031494.1\|4485307_4486951_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223989
NZ_CP050177.1\|WP_167031497.1\|4487163_4487880_+\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167031500.1\|4487938_4490497_-\|DNA-binding-protein	gnl\|CDD\|379300	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain. This domain family is found in a wide variety of helicases and helicase-related proteins.	5.44107e-40
NZ_CP050177.1\|WP_167031527.1\|4500546_4501299_-\|futalosine-hydrolase	gnl\|CDD\|350166	cd17766, futalosine_nucleosidase_MqnB, futalosine nucleosidase which catalyzes the hydrolysis of futalosine to dehypoxanthinylfutalosine and a hypoxanthine base; similar to Thermus thermophiles MqnB. Futalosine nucleosidase (MqnB, EC 3.2.2.26, also known as futalosine hydrolase) functions in an alternative menaquinone biosynthetic pathway (the futalosine pathway) which operates in some bacteria, including Streptomyces coelicolor and Thermus thermophiles. This domain model belongs to the PNP_UDP_1 superfamily which includes members which accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. PNP_UDP_1 includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). Superfamily members have different physiologically relevant quaternary structures: hexameric such as the trimer-of-dimers arrangement of Shewanella oneidensis MR-1 UP, homotrimeric such as human PNP and Escherichia coli PNPII (XapA), homohexomeric (with some evidence for co-existence of a trimeric form) such as E. coli PNPI (DeoD), or homodimeric such as human and Trypanosoma brucei UP. The PNP_UDP_2 (nucleoside phosphorylase-II family) is a different structural family.	2.43808e-70
NZ_CP050177.1\|WP_167037137.1\|4481287_4483273_-\|AAA-family-ATPase	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	9.71657e-66
NZ_CP050177.1\|WP_167031521.1\|4499242_4499626_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	7.46128e-26
NZ_CP050177.1\|WP_167037143.1\|4493837_4494812_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|181818	PRK09393, ftrA, transcriptional activator FtrA; Provisional.	7.92291e-125
NZ_CP050177.1\|WP_167031487.1\|4480190_4480895_+\|copper-homeostasis-protein-CutC	gnl\|CDD\|225684	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism].	2.63363e-20
NZ_CP050177.1\|WP_167031506.1\|4492806_4493691_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	1.33992e-34
NZ_CP050177.1\|WP_167031524.1\|4499656_4500550_-\|1,4-dihydroxy-6-naphthoate-synthase	gnl\|CDD\|270353	cd13635, PBP2_Ttha1568_Mqnd, A menaquinone biosynthetic enzyme exhibits the type 2 periplasmic-binding protein fold. This group includes Ttha1568 (MqnD) from Thermus thermophilies HB8, an enzyme within an alternative menaquinone biosynthetic pathway that catalyzes the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate. Menaquinone (MK; vitamin K) is an essential lipid-soluble carrier that shuttles electrons between membrane-bound protein complexes in the electron transport chain. Ttha1568 has significant structural homology with the members of type 2 periplasmic-binding fold protein superfamily. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.90597e-142
NZ_CP050177.1\|WP_167031503.1\|4490836_4492006_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	0.000256525
NZ_CP050177.1\|WP_167031509.1\|4495743_4496829_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	4.8471e-75
NZ_CP050177.1\|WP_167031515.1\|4498046_4498742_+\|HAD-family-hydrolase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	1.00165e-22
NZ_CP050177.1\|WP_167031512.1\|4496825_4497860_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	7.73754e-85
NZ_CP050177.1\|WP_167037140.1\|4484114_4485350_+\|DUF2029-domain-containing-protein	gnl\|CDD\|172015	PRK13375, pimE, mannosyltransferase; Provisional.	1.21426e-52
NZ_CP050177.1\|WP_167031481.1\|4477479_4479831_-\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP050177.1\|WP_167031494.1\|4485307_4486951_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	6.1637e-109
NZ_CP050177.1\|WP_167031497.1\|4487163_4487880_+\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	4.22869e-28

>NZ_CP050177.1|WP_167031503.1|4490836_4492006_+|hypothetical-protein
MGIESDQLVYDYLSRVGDAARQQQLASGDRMRLVSTLRNEIDRQRGKSGGDSPAAVRRILGRLGEPNAVVRAASSGGPGASAGSGDPGGYAPPPSPPPPASPSPSPSSSSSPGPVVPGQRGRRGGGWLSKAGRSGRGDRGDKAAGTDAGAQIPHQASGPSGASAVPGPRGPHLAGMDEVGSANGRTDWWRVEPGPMGNGPTGGGIGVPGFVGGVELPEILVPPPDPAKKAGAAGDGDEAVEAGSAGRRAWRALWRRRGADEAVGEAEEAEVVVAARPVRLSHPLLLLAAGLLVVGAFLGSWLALAGGWLLAYASRALPRAAAKWAVFGLPGVSVAGGLIWLWGRANDRWGEAIPEGGWNAAIADTAPAVIRTAAIASALYLLWRSRRQT
>NZ_CP050177.1|WP_167031500.1|4487938_4490497_-|DNA-binding-protein
MPEGTGGTPPRTLAEALRTRGDDSLTALLRARPDLLNPVPNDLSQLATRAGTRASVVRALERLDRFTLQTAEALAVAPEPAPYDTLRALLTGDEGDARIERALPAAVGRLRDQALIWGSDTRLRLVRTARELLAPSPTHPSPTGLGPTVAEATAGMSPGRIQEILTAAWLPSTHDPVSAVAALTELFTDRTRMAALLDTAPMEALSVLDRLVWGPPYGEVTSSPTPPVQWLRDRGLLLPATTRTVVLPREVALHLRAGRAHRVVEPEAPPVAPRTSEPGSGARPQLVDGTAAGQAYTALATIEELAKDWNEGGPSVLRAGGLSVRDLKRTATALGVTEPLAAFWVELAYAAGLLAADGEADERYAPTPAYDEWEELPSPERWARLAVAWLTATRTAGLVGGQDSKGRTLAALGPDLDRGPAPEVRRRILDLLATLPEGTPPDPESLMARLRWERPLRGASAAGRPDDLRGRLAAWTLNEAELLGLTGRGALSTHARALLDALGDPAEGITTSPAELAAAGLRAAEALRPLLPEPLDHVLLQADLTAVAPGPLLRPLAELLSVAAEVESTGGATVYRFTPASVRRALDAGQSATGLHDFLKAHSRTPVPQPLTYLVDDVARKHGHLRVGSANAYVRCDDEAVLDEIVADRRSQGMRLRRLAPTVLAAQADPSTLLDGLRAMGFAPAAESADGDVLITRAHAHRTPARTAPAPVPDGPPVPDATLLGAAVRAIRAGDLAATVVHKTVPEPAGSRSRARAVSASAAHTAASASRRGDLPRTTSAETLATVQAAAMTGSALWIGYVNAEGAASQRVIAPVRVEGGFVTAYDHTADEVRTYPLHRITGVAELADDTA
>NZ_CP050177.1|WP_167031497.1|4487163_4487880_+|VanZ-family-protein
MTAETSKPGPDRAAPRRISWGRAVLRVIILVVAFLALVAFSAVLADLTLTPSPASAEIAGSNLRPGHSLRQYAEDYTFLAACKQIGGNIVMGMPFGLILPVLMPRRLPMLRVVVLTAVVMALVELAQGSIVQGRAFDVDDVILNTSGALLGYLLLGRRIGRRFHALGVPEPLPAAEPAPVDGPAPATRTEKARPSGRRTLPRSRPRTQQKPKLTPMAKAEEKPRANWSERLVRLGRRT
>NZ_CP050177.1|WP_167031494.1|4485307_4486951_-|DEAD/DEAH-box-helicase
MNGPLIVQSDKTLLLEVDHDQAGACRRAIAPFAELERAPEHIHTYRLTPLGLWNARAAGHDAEQVVDALVEFSRYPVPHALLVDVAETMARYGRLTLSKHPTHGLVLTSTDRPVLEEILRSKKVAPLVGARLDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHAIDLVEDGWALRPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHELVKRTTLTEEEIGEYSGTRKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLILYDEVHLLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPADCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEALVRKHKGEQTLVIGQYIDQLDELGEHLDAPVIKGETSNAQREKLFESFRQGEISVLVVSKVANFSIDLPEATVAIQVSGTFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDADELLAGN
>NZ_CP050177.1|WP_167037140.1|4484114_4485350_+|DUF2029-domain-containing-protein
MADTLVYRAEGAAVVDGTDLYGFTVTQWRLPATYPPFAAILFVPTTWPPVGVLKCAFVVGNLALLALLVRLSGRFAGLRYGGPYGPVRPAPYVLRYVLPIALPVAAGLALWLEPVFQTVLFGQINLALACLVLWDLSRPEHAVGKGFALGVAAGVKLTPAIFLVYLLVTGRVRAGLTALASLTGTVLLGALVLPRASADFWTRRVFETDRVGKAWIVDNQSLRGLLSRVLRTTDPGPVWAVAAALTAAAGLWLARRVFLRHGLETWGVLVTALTALLVSPISWSHHWVWCVPLLAVLIAEGHHRTAAAAGVVWTARTLWAVPHRGDLDLRLPWWQQPLASPYPLAALALLAWIARRTADAPLSPAPRQSAPRHPTPRPPTPLHTAPEHPAPQHPAPATQFPASSSSASTIR
>NZ_CP050177.1|WP_167031489.1|4483756_4483960_+|hypothetical-protein
MSTATFIPPRAPHGASLSGATATGAVPHPAHHVGNALRAVKVYVTTAFGVAVLGEYWEEAGVVRRRL
>NZ_CP050177.1|WP_167037137.1|4481287_4483273_-|AAA-family-ATPase
MREDVQSLDIRDVTANWVNAAVLEAQIEERIKALADLSHTPLFFGRLDYLHVVGADQAEGAEGERFYIGRRHVHDADGDPMVVDWRAPVSQPFYRASKKDPHDVGLRRRFGYTAGELTAYEDEHLSDPTEAATTSKLLQAEIERPRVGPMRDIVATIQPEQDEIVRSGLGGTVCVQGGPGTGKTAVGLHRVAYLLYAHRERLARTGTLVIGPNASFLHYIEQVLPALGELEVKQATVESLVTSAAVEVRGTDPAGTAVVKGDARMAEVLRRAIRSHVTLPTEPVVVVRGSRRWRVPAYELEELVRQLLERDMRYGAAHEALPQRIAHAVLVRMEEAGEAPDDRVQDAVARTPAVKAAVKAMWPPVDPAKLVLRLLSDAEFLAAHAEGLLTPEEQGAILWAKPARSVRAAKWSAADAVLIDEAADLVARTHSLGHVVLDEAQDLSPMQYRAVGRRCSTGSATVLGDLAQGTTPWATASWADALRHLGKSDAVVEELTAGFRVPREVIAYASRLLPLISPGLAEVESVRESPGSLSVRRVVDPLALGAAVVAACVESLTHEGSTGLIAADARIPLLAGLLDAAGLPYLSPGEETTAEARLTLVPASLAKGLEYDYVVLDEPAAVVSGEPDERTGLRRLYVALTRAVSGLSVLHATPLPPALRA
>NZ_CP050177.1|WP_167031487.1|4480190_4480895_+|copper-homeostasis-protein-CutC
MSKRAVLEVIALDAEDAVAARSGGADRLELVTDMAADGLTPPRETFAKIRDAVDIPLRVMLRLSDGFAAGGADGVEALVDAARGLRAEGADEFVFGFLDEDGTPDLVTVERLVAELDGCRWTFHRAIDRAVDRDELRKQLADLPGLDTFLTAGAAEGVDQGLPTLLAEAVASGRGEPGYGACLLVGGGLRLSHVPALRAGGVEAFHIGGAARPFGWGGPVSTASVLSWREALDA
>NZ_CP050177.1|WP_167031484.1|4479946_4480117_+|hypothetical-protein
MSTTSTKVRVAAFVLALAAAFGGAYGIGAAVGPLPASSGGAEEPHEPGHGTDGVMR
>NZ_CP050177.1|WP_167031481.1|4477479_4479831_-|copper-translocating-P-type-ATPase
MNVTQGSDTGTEATAPVSVELLIGGMTCASCAARVEKKLNRMDGVEATVNYATEKAKVSYRGDDISVQDLVATVEATGYTAREPVPDPPAPTASPQESAAEAGKGAGKEAGKESGEEDAALRPLRERLITAVLLSVPVIAMAMIPALQFTNWQWLSLTLAAPVVTYAAWPFHRAAWTNARHGAATMDTLISLGTSAAFLWSVWALFFGTAGMPGMTHPFEFTLSRSDGSGNIYLEAAAGVTAFLLAGRYFEARAKRRAGAALRTLLELGAKEVTVLRDGLETVIPTGQLTVGDRFLVRPGEKIATDGTVVEGSSAVDASMLTGESVPVEVSAGDAVTGATLNAGGRLVVEATRIGSDTQLARMARMVEDAQNGKAAAQRLADRISAVFVPVVMGLALATLGFWLGVGAGAAAAFTAAVAVLIIACPCALGLATPTALMVGTGRGAQLGILIKGPEVLESTRRVDTIVLDKTGTVTTGRMTLLATHSADGTDKRDVLRLAGALEHASEHPLARAVAEAATARAGTLPTPEDFANLPGLGVQGVVEGHAVLVGRVRLLAEWEIHLPESLETARKAAEAAGRTAIAVAWDGEARGLLEVADAIKETSPEAVRQLRTLGLTPILLTGDNQAVAESVAAQVGIDQVIAEVMPEDKVGVVKRLQAEGRTVAMAGDGVNDAAALAQADLGLAMGTGTDAAIEAADLTLVRGDLRATADAVRLARRTLNTIRGNLFWAFAYNLAALPLAAAGLLNPMIAGAAMAFSSVFVVGNSLRLRRFTSLSPTADRPS
>NZ_CP050177.1|WP_167031506.1|4492806_4493691_-|NAD(P)-dependent-oxidoreductase
MHSDHRAVSVVGLGSMGSALAAALLDGGHPTTVWNRSPHKARPLTDRGARLAATPEEAIAASPLVVACVRDHEALRAVLDPLTGSLAGKSLVNLTSGTPEQAQENLAWARSHGADFLDGAAMTTPPGVGNAEVMFLYSGSRAVFDTHRPALTALGDPLYLGADAGTASLHDAALLGLMWSAMTGWLHGTALVGAEKTPATAFTPLAVRWLSTVSGFLTTYASQVDAGHYPGDDATVDVQIAAVDHLIHAAAARGVDNGLPELLKATMERARTAGHGSDSYASVIEVLRNPTAGR
>NZ_CP050177.1|WP_167037143.1|4493837_4494812_+|helix-turn-helix-domain-containing-protein
MAVIEDVRVLSWDLYELSIPCTVFGKPQPDLADTWYDLRLCGGGDPPEDGTPAGAGIALRTPYGLADLVGADTVVVPSVPDSCVEDGRPLPRALIEALRDASDAGARMVSLCTGAFALAEAGLLDGRRATAHWMHTAQLAERYPKVQVDDSVLYVDDGDVLTSAGLSAGLDLCLHLVRRDLGAHVANQLARRMVVPAHRTGGQAQFIDLSVPPSDDQGLGHVLDWARARLDQPLTVEDLARRAAMSRRTFYRRIRAATGTTPLQWLLNQRLARAQGLLESTDLPVEKVGELSGLGTANNLRHHFLKQLGVSPADYRRAFPRTTP
>NZ_CP050177.1|WP_167031509.1|4495743_4496829_-|iron-ABC-transporter-permease
MTTVVGEKARPRAGGVRPEGYVVVRAGRGSFLLHRRACAAAAGLAVLLAAVCVAYLSVGESFVPPSEVLKVILGQPSPDELVVGTLRLPRMVVGLFVGLAFGVAGALIQTVARNPLASPDIIGISQGAGALTVGAMTFGVTSYTALPYLSVAGGIAAAALVYVFAWRGGLHATRFVLIGIGFAIALRSVTSLFLTKGDYLVAQQAQVWMTGSLNGRGWEEATPLGWTLLALVPAVAWAAYAQRSVSLDDDTATALGVRLGGTRLGLVLLGVVLASVATGAAGPVDFVALLAPQIARRMTRTAQIPLLCSALLGAVIVVLADLLARKLFSPTELPVGVLTAAVGAPYLIWLIVRSRTAGGTA
>NZ_CP050177.1|WP_167031512.1|4496825_4497860_-|iron-ABC-transporter-permease
MPAAAPPIPRTRRALAARRTGWTAAAVVALLLAVLLSLAVGARAVAPSVVFDALLHGGHSDDAEVVRHLRVPRTLIGLMVGAALALAGTTFQGITRNPIADPGILGISQGSSVAVVLAISVLGVHTLSGYVWFAFAGAAVASVAVYAIASSGRGGATPVKLALGGAAINALLASVTQGVLTTDASTLDEFRFWQVGSIAGRDTHVVNQIWPFLLLGAVLVFSVARGLDALALGEDVAKGLGQNVAAVRILGGLGATVLTGAGVAAAGPIAFVGLAVPHIARAIVGTDHRWLLPMAALIGPVMLLVSDVIGRIVFPPGEVPAGVMTALLGVPFLVALVRRKAVPA
>NZ_CP050177.1|WP_167031515.1|4498046_4498742_+|HAD-family-hydrolase
MASLTPSAPSRSTPSRALTVGFDLDMTLIDSRPGIRAAFLALSAETGVPIDADLAVTRLGPPLDRELAHWFPEDRIAEVGDRYREMYPAYAITPSTALPGAREAVAAVRASGGRVIVVTAKYEPNAKLHLAHLGIEPDDVIGSLWAEGKAEALRAHGASAYVGDHTGDVRGARAAGALSVAVPTGPCDEAELLAAGADVVLPDLTAFPAWVRAYAAGVAGADAESEAADLA
>NZ_CP050177.1|WP_167031518.1|4498684_4499017_-|hypothetical-protein
MTATPAPRTAAPAPRTADEPGPGDGLVRIGALVFIVGAVATLVTVAPLFFGTRPFPTVAYLVSMLMGVGFLVAAAGVLRSVAAQRRQAKSAAQARSAASDSASAPATPAA
>NZ_CP050177.1|WP_167031521.1|4499242_4499626_+|cold-shock-protein
MPTGKVKWFNSEKGFGFLSRDDGGDVFVHSSVLPAGVDVLKPGQRVEFGVVAGQRGDQALSVTVLDPTPSVAAAQRRKPDELASIVQDLTTLLENITPMLERGRYPDKANGSKIAGLLRAVADQLDV
>NZ_CP050177.1|WP_167031524.1|4499656_4500550_-|1,4-dihydroxy-6-naphthoate-synthase
MTSQPQPVPTPPHEADSGRPLDIAFSPCPNDTFVFEAWAHGRVPGAPALDVTFADIDITNGMAERGEFDILKVSYAVLPYVLDEYALLPCGGALGRGCGPLVLTKEAGTDLTGKTVAVPSERSTAYLLFRLWAAEVVPGGVGEIVVLPFHEIMPAVRDGKVDAGLVIHEARFTYQNYGLHCLADMGAHWESTTGLPIPLGAIIAKRSLGAETLGRLADAARASVRMAWDDPEVSRPYVLAHSQEMDPAVADQHIGLYVNEFTADLGEDGYAAVRGLLTRAAAEGLVPPLRHDALRPA
>NZ_CP050177.1|WP_167031527.1|4500546_4501299_-|futalosine-hydrolase
MHVLVVTAVAAEADAVVGGLAGFTALGLREMTGGYELRGHAQYMPRPASVRIPVVDVLVGGVGPAASAAATATALAFSTYDPPYDLVVSAGIGGGFAPHAPLGSLVVSDAIVAADLGADTPDGYLPVDELGFGRTVHRPAPALSGRVAKVLAGDPAVRVVLAPVLTVSTVTGTAARAAELTRRHPRAAAEAMEGFGVAEAAFRHDIPCVEIRAVSNAVGPRDRDAWRIGPAMDALRYAFATLTPVFEESS
>NZ_CP050177.1|WP_167031530.1|4501363_4501852_-|DUF2771-domain-containing-protein
MTVAFFSGRGRRAGIALGAVSAGLLVLAACDKPTPLATVTVGDDSWNSGANCYNDGKAIAQKDLLNCVKRKAENTVEVNSTDEVHLGVEPSIADHSWAVIVDGTPVFDEPTKKTYRTMTGAQFFAPDPQTGQPAPTTRQVSFLKIDGKSFSGVWNFTFKKTS

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Crispr_ID: NZ_CP050177_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_22

4505138-4505223

Orphan

Consensus_repeat	Method
CCAGCCCGTCCGGCGTTTGAGGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_22

>merge|NZ_CP050177|22|4505138-4505223|CRISPRCasFinder
CCAGCCCGTCCGGCGTTTGAGGACGTCTTTGACCCGCACGGGCAACGGGCCCGGGCCACATCCAGCCCGTCCGGCGCTTGAGGACG

>NZ_CP050177|22|17|4505138-4505223|CRISPRCasFinder
CCAGCCCGTCCGGCGTTTGAGGACG	TCTTTGACCCGCACGGGCAACGGGCCCGGGCCACAT
CCAGCCCGTCCGGCGCTTGAGGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167031518.1\|4498684_4499017_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031562.1\|4515675_4518498_-\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319795
NZ_CP050177.1\|WP_167031536.1\|4503911_4504832_+\|DUF3027-domain-containing-protein	unknown	unknown	gnl\|CDD\|378605
NZ_CP050177.1\|WP_167031521.1\|4499242_4499626_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP050177.1\|WP_167031540.1\|4506470_4507001_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031549.1\|4509584_4510070_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031546.1\|4508862_4509306_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031512.1\|4496825_4497860_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP050177.1\|WP_167031568.1\|4519007_4519190_-\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031530.1\|4501363_4501852_-\|DUF2771-domain-containing-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031565.1\|4518674_4518962_-\|DUF2530-domain-containing-protein	unknown	unknown	gnl\|CDD\|378488
NZ_CP050177.1\|WP_167031524.1\|4499656_4500550_-\|1,4-dihydroxy-6-naphthoate-synthase	unknown	unknown	gnl\|CDD\|270353
NZ_CP050177.1\|WP_167031556.1\|4513665_4514571_+\|calcium-binding-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031559.1\|4514729_4515596_+\|calcium-binding-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031509.1\|4495743_4496829_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP050177.1\|WP_167031543.1\|4507035_4508856_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283837
NZ_CP050177.1\|WP_167031533.1\|4502002_4503355_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP050177.1\|WP_167031527.1\|4500546_4501299_-\|futalosine-hydrolase	unknown	unknown	gnl\|CDD\|350166
NZ_CP050177.1\|WP_167031552.1\|4510291_4513438_+\|molecular-chaperone-Hsp90	unknown	unknown	unknown
NZ_CP050177.1\|WP_167031515.1\|4498046_4498742_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223620

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167031562.1\|4515675_4518498_-\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	3.3976e-158
NZ_CP050177.1\|WP_167031536.1\|4503911_4504832_+\|DUF3027-domain-containing-protein	gnl\|CDD\|378605	pfam11228, DUF3027, Protein of unknown function (DUF3027). This family of proteins with unknown function appears to be restricted to Actinobacteria.	8.62427e-105
NZ_CP050177.1\|WP_167031521.1\|4499242_4499626_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	7.46128e-26
NZ_CP050177.1\|WP_167031509.1\|4495743_4496829_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	4.8471e-75
NZ_CP050177.1\|WP_167031515.1\|4498046_4498742_+\|HAD-family-hydrolase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	1.00165e-22
NZ_CP050177.1\|WP_167031533.1\|4502002_4503355_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.7695e-27
NZ_CP050177.1\|WP_167031527.1\|4500546_4501299_-\|futalosine-hydrolase	gnl\|CDD\|350166	cd17766, futalosine_nucleosidase_MqnB, futalosine nucleosidase which catalyzes the hydrolysis of futalosine to dehypoxanthinylfutalosine and a hypoxanthine base; similar to Thermus thermophiles MqnB. Futalosine nucleosidase (MqnB, EC 3.2.2.26, also known as futalosine hydrolase) functions in an alternative menaquinone biosynthetic pathway (the futalosine pathway) which operates in some bacteria, including Streptomyces coelicolor and Thermus thermophiles. This domain model belongs to the PNP_UDP_1 superfamily which includes members which accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. PNP_UDP_1 includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). Superfamily members have different physiologically relevant quaternary structures: hexameric such as the trimer-of-dimers arrangement of Shewanella oneidensis MR-1 UP, homotrimeric such as human PNP and Escherichia coli PNPII (XapA), homohexomeric (with some evidence for co-existence of a trimeric form) such as E. coli PNPI (DeoD), or homodimeric such as human and Trypanosoma brucei UP. The PNP_UDP_2 (nucleoside phosphorylase-II family) is a different structural family.	2.43808e-70
NZ_CP050177.1\|WP_167031565.1\|4518674_4518962_-\|DUF2530-domain-containing-protein	gnl\|CDD\|378488	pfam10745, DUF2530, Protein of unknown function (DUF2530). This family of proteins with unknown function appears to be restricted to mycobacteria.	0.000187174
NZ_CP050177.1\|WP_167031512.1\|4496825_4497860_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	7.73754e-85
NZ_CP050177.1\|WP_167031543.1\|4507035_4508856_-\|hypothetical-protein	gnl\|CDD\|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	8.31268e-22
NZ_CP050177.1\|WP_167031524.1\|4499656_4500550_-\|1,4-dihydroxy-6-naphthoate-synthase	gnl\|CDD\|270353	cd13635, PBP2_Ttha1568_Mqnd, A menaquinone biosynthetic enzyme exhibits the type 2 periplasmic-binding protein fold. This group includes Ttha1568 (MqnD) from Thermus thermophilies HB8, an enzyme within an alternative menaquinone biosynthetic pathway that catalyzes the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate. Menaquinone (MK; vitamin K) is an essential lipid-soluble carrier that shuttles electrons between membrane-bound protein complexes in the electron transport chain. Ttha1568 has significant structural homology with the members of type 2 periplasmic-binding fold protein superfamily. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.90597e-142

>NZ_CP050177.1|WP_167031536.1|4503911_4504832_+|DUF3027-domain-containing-protein
MSAATTRSRTPDRLCAEAVDLARSAAEEAAFPGVVGEHVTAVADGDRVVTHFFECKELGYRGWRWAVTVTRASRAKLVTLDETVLLPGPDSLLAPEWVPWSERLRPGDMGPGDLLPTEAEDLRLEPGYNAEESAPPNSVVASAVTPQNLADLVEAESTAPSPSPSPSLSSDPSGTARGTIAAVAEELGMRRARVLSRYGLHLSADRWDESFGAKTPMAQAAPAPCVSCGFLLPLAGSLRQAFGVCANEFSPADGHVVSLAYGCGGHSEAAVMPPPLRPLPPVMDSMATDAFPLDQTTQEAEDLGHA
>NZ_CP050177.1|WP_167031533.1|4502002_4503355_-|MFS-transporter
MAAARSSDDAGPLRRTGRAVGHALRLPFTASARGIRKATHAHGAGESGLGKLIELHAVNGAGDVMITVALASTVFFSVPTDEARGRVALYLAVTMAPFTLLAPVIGPLLDRVPHGRRAAMAAAMLTRAILAIAMSTFVATGGLELYPAALGVLVASKAYGVVRSAVVPRLLPPNFSLVRANSRVTLAGLLATGVAAPIGAGLQIVGPQWPLYGACLIFTGGTILAFTLPHKVDSAKGERKAQLVRHGEKRPSLRSVGPSVLHGLQANASHRALSGFLTFFLAFLLREHPLAGQSAAVSLGIVGVSAGVGNALGTAVGSLLKSRGPELIIATMLGLALTAAIFAAVFFGGLAVAVLGAVAGLTQALSKLSLDATIQRDVPEEVRTSAFARSETLLQMSWVVGGAIGIALPLNGSLGMSVAAGIMALGALAAVRGLIRASRPAASQHLGHHA
>NZ_CP050177.1|WP_167031530.1|4501363_4501852_-|DUF2771-domain-containing-protein
MTVAFFSGRGRRAGIALGAVSAGLLVLAACDKPTPLATVTVGDDSWNSGANCYNDGKAIAQKDLLNCVKRKAENTVEVNSTDEVHLGVEPSIADHSWAVIVDGTPVFDEPTKKTYRTMTGAQFFAPDPQTGQPAPTTRQVSFLKIDGKSFSGVWNFTFKKTS
>NZ_CP050177.1|WP_167031527.1|4500546_4501299_-|futalosine-hydrolase
MHVLVVTAVAAEADAVVGGLAGFTALGLREMTGGYELRGHAQYMPRPASVRIPVVDVLVGGVGPAASAAATATALAFSTYDPPYDLVVSAGIGGGFAPHAPLGSLVVSDAIVAADLGADTPDGYLPVDELGFGRTVHRPAPALSGRVAKVLAGDPAVRVVLAPVLTVSTVTGTAARAAELTRRHPRAAAEAMEGFGVAEAAFRHDIPCVEIRAVSNAVGPRDRDAWRIGPAMDALRYAFATLTPVFEESS
>NZ_CP050177.1|WP_167031524.1|4499656_4500550_-|1,4-dihydroxy-6-naphthoate-synthase
MTSQPQPVPTPPHEADSGRPLDIAFSPCPNDTFVFEAWAHGRVPGAPALDVTFADIDITNGMAERGEFDILKVSYAVLPYVLDEYALLPCGGALGRGCGPLVLTKEAGTDLTGKTVAVPSERSTAYLLFRLWAAEVVPGGVGEIVVLPFHEIMPAVRDGKVDAGLVIHEARFTYQNYGLHCLADMGAHWESTTGLPIPLGAIIAKRSLGAETLGRLADAARASVRMAWDDPEVSRPYVLAHSQEMDPAVADQHIGLYVNEFTADLGEDGYAAVRGLLTRAAAEGLVPPLRHDALRPA
>NZ_CP050177.1|WP_167031521.1|4499242_4499626_+|cold-shock-protein
MPTGKVKWFNSEKGFGFLSRDDGGDVFVHSSVLPAGVDVLKPGQRVEFGVVAGQRGDQALSVTVLDPTPSVAAAQRRKPDELASIVQDLTTLLENITPMLERGRYPDKANGSKIAGLLRAVADQLDV
>NZ_CP050177.1|WP_167031518.1|4498684_4499017_-|hypothetical-protein
MTATPAPRTAAPAPRTADEPGPGDGLVRIGALVFIVGAVATLVTVAPLFFGTRPFPTVAYLVSMLMGVGFLVAAAGVLRSVAAQRRQAKSAAQARSAASDSASAPATPAA
>NZ_CP050177.1|WP_167031515.1|4498046_4498742_+|HAD-family-hydrolase
MASLTPSAPSRSTPSRALTVGFDLDMTLIDSRPGIRAAFLALSAETGVPIDADLAVTRLGPPLDRELAHWFPEDRIAEVGDRYREMYPAYAITPSTALPGAREAVAAVRASGGRVIVVTAKYEPNAKLHLAHLGIEPDDVIGSLWAEGKAEALRAHGASAYVGDHTGDVRGARAAGALSVAVPTGPCDEAELLAAGADVVLPDLTAFPAWVRAYAAGVAGADAESEAADLA
>NZ_CP050177.1|WP_167031512.1|4496825_4497860_-|iron-ABC-transporter-permease
MPAAAPPIPRTRRALAARRTGWTAAAVVALLLAVLLSLAVGARAVAPSVVFDALLHGGHSDDAEVVRHLRVPRTLIGLMVGAALALAGTTFQGITRNPIADPGILGISQGSSVAVVLAISVLGVHTLSGYVWFAFAGAAVASVAVYAIASSGRGGATPVKLALGGAAINALLASVTQGVLTTDASTLDEFRFWQVGSIAGRDTHVVNQIWPFLLLGAVLVFSVARGLDALALGEDVAKGLGQNVAAVRILGGLGATVLTGAGVAAAGPIAFVGLAVPHIARAIVGTDHRWLLPMAALIGPVMLLVSDVIGRIVFPPGEVPAGVMTALLGVPFLVALVRRKAVPA
>NZ_CP050177.1|WP_167031509.1|4495743_4496829_-|iron-ABC-transporter-permease
MTTVVGEKARPRAGGVRPEGYVVVRAGRGSFLLHRRACAAAAGLAVLLAAVCVAYLSVGESFVPPSEVLKVILGQPSPDELVVGTLRLPRMVVGLFVGLAFGVAGALIQTVARNPLASPDIIGISQGAGALTVGAMTFGVTSYTALPYLSVAGGIAAAALVYVFAWRGGLHATRFVLIGIGFAIALRSVTSLFLTKGDYLVAQQAQVWMTGSLNGRGWEEATPLGWTLLALVPAVAWAAYAQRSVSLDDDTATALGVRLGGTRLGLVLLGVVLASVATGAAGPVDFVALLAPQIARRMTRTAQIPLLCSALLGAVIVVLADLLARKLFSPTELPVGVLTAAVGAPYLIWLIVRSRTAGGTA
>NZ_CP050177.1|WP_167031540.1|4506470_4507001_-|hypothetical-protein
MKTKPSALVLTLTLALSTLTGCGMTENNSSGTPFAGISTSSDASDTMEKVSSGIYDLIGVKGKASDSRPGVLDCSGKDTKTYFRIFHPWAFTPGSASDLDEAMERLRSELPKHGWKIVEYGPDTSKNKNIKLTADNDRKKVGVNIVQMSKNDPPILDLTVVSGCYQVPDGEEVERF
>NZ_CP050177.1|WP_167031543.1|4507035_4508856_-|hypothetical-protein
MDLATLKALKPAEYAEAAEGYRGTSEMASAAKDRVETRIAVSMRGSLKGEAADAAIGQLAELGKNFHYIQLECGLVGSALDAFAYEMEAAKRKLDAALDDARAAGLTVHPDGSITYPPGGQKAEDGKLPEGGTVSGLTDGTASAVGRQAAGFDPNPHRRRAQDCANVIAAALRQATEADEKWAPKLRALKADDDLTVSDRDWADASSDTSGVREAGKRYLDSLPQPPRDGSPRQNAEWWKRLSTEEQAAWVSMRPDAVGALDGLPSTIRDESNRMVLAQARGVAQGQYETWLRTHPAPDRFQTYIDPYTGTVMKGVQVETQAWKKWEEARKGAHKTLDGMDAIQRRFDATGKNGLPEAYLLGFSAEGDGRAIIANGNPDTADHRAVYVPGTSSDLGSIEGNINRMANVWHAANRYPDVQSVSTITWLGYDAPDSVYKDAPFENYAYDGAPEFRDFMDGLDVSHSGDSAAHTTVIAHSYGTTLVGAAAESGHLNADDVIFAGSPGVKVSDANQMDVPRGHVWNQEADGDPVPDLGRWGHGGDHFIIPSDPGFGASQMATDTKGHSGYWDENSQSLRNQALVVAGKGSNVELKPPPDPWAQVKTIQRK
>NZ_CP050177.1|WP_167031546.1|4508862_4509306_-|hypothetical-protein
MAWDEWEQLKTAAAERHTTRMRLNQVPLDPGGGTGTLVSNKSAWSRASRDVGAFRDDIGKALGRLSEGQTGLGADAGCLTAAAQKDVHESWDRYVRSVNERCGKLAGLLAGAGSDQLRTDEAIMAEIGNLKVEHADTPAVGGQDTGR
>NZ_CP050177.1|WP_167031549.1|4509584_4510070_+|hypothetical-protein
MAYQLQAVAGGELLLRGASEGLVGACVVPLGGGVALVPMTDRLVDAVGEGDSGRALGFWRLPGGFEAVLARWSRAGAVAYVEAEYFGGAGEQSAAVWEGGELAWGPVHVPEGREFSADGGPISQALRRLGVVAREGQDEFATLGLGRHRDNERWIRAGGGR
>NZ_CP050177.1|WP_167031552.1|4510291_4513438_+|molecular-chaperone-Hsp90
MGVRTTEGVDPFGTGRLRRGVLDAWGASPARFREDANAEEDLALGGYRDRLVVELAQNAADAASRGISRVGEGGGAQGSGRLRLRLVGGGGDGAGVLTAANTGAPLDSAGVESLSTLRASAKREGHEGAVGRFGVGFAAVLAVSDEPAVLGHHGGVRWSLDEARELAAEAAQGSPGLGDELRRRDGHVPLLRLPLPAEGAPPEGYDTVVVLPLRDAAAFDLVERLLGEIDDALLLTLPGLAEVVVETPGGERVLRRSVEGPYVHVDDSAGGGDIHRWRVVSRDGAIAPELLEGRPVEERLRPHWAVTWAVPVDEEGAPARPRTAPVVHAPTPTDEPLGVPALLIASFPLDPSRRHTAPGPLTDFVVGKAADAYAELLGGWEPVSTGTIDLVPGPLGKGELDGGLRAAILERLPRVAFLAPAGPSEELTALRPFEAEVVEGGGADTVRVLAEVLPTLLPAGFERRTELRTLGVGRLPLGDAIDRIAGAERPPEWWRRLYETLAGVDPDRLSGLPVPLANGRTTIGPRQVLLPFPDTEAPADLARLGLKVAHPDAAHPLLEKLGAMPATPRAVLTTPQVRNAVAASMDAGEIWDEDADTLDAEELAETVLRLVRDAGLEPGDEPWLAALALTDEDGELAPAGELVLPGSPFAALMREDELALCDGDLAAKWGEQPLAACGVLATFALVRATDVVLDPDELEPRDGDFAEPDDAGLLDAVDVWCEDVLDRLPETPVPPVATEIVAVRDLDLVDDDAWPQALALLARPPLRDALTQSVRVLLPDGTTESVRSYTAWWLRDHPVLDGRRPAGLRAAGGDPLLSGLYDPVDASGFDDAQVLHALGVRTSVAALLDEPGGAAELLGRLADPGRTVGVAQLHSLYTALADLDPDQVTLPDELRVVVDGEVRVVDAGDAVIADAPDLLPLAGGLPLLPVAPSRAAELAELLQVRRLGATVPAEVTTDGEEHDVPEAVRDLLGAGTPETYVEHEELIAGGVELDWRRTPDGVVHAATLEGVAAGLAWAAGQWPRRFEVAALIEDPSRTGELERDRWFD
>NZ_CP050177.1|WP_167031556.1|4513665_4514571_+|calcium-binding-protein
MRIRATVVAAASGALALSAFAVPASQAAQQDGVHAATAHLTGVVRGIAEDHHTSTVTTKHSAFAANKAAVANKPAVITKASVNGGKAIVVTATETKARKIPFSVTATDASGVVVAAAGLWSGTNDNSFDPDENSIACKVINKTTTTCTGSVTLKPTQLKNVDATAWHVLAVAFGNDDNPDVDQPGLNESASTVRLQRASQLTVDATPEPVKKGKTITVNGKLTRADWQTNKNAGYGTQPVKLQFRKKTATTYTTVKTVKTSSTGVLKTTVTASVDGYYRWSFAGTTTTPAVNAAGDAIDVK
>NZ_CP050177.1|WP_167031559.1|4514729_4515596_+|calcium-binding-protein
MRMRATVAVVTGALALSALAIPASQASPRPHNDRVPFGERGFVSQDRAPVAGKRAPLAASANTQPVISKVVVNGGKPIAVGTTAVKKVTATLTASDDSGIEDAYIELWKGSSPEDADNWFSPDGDAAKCKAAGATTSTCTVTFSVDPEYLYNVDATTWKITAAVLGNDQDVVWNDKYSTVKFQRQSQLTVNAAPEPVKKGKTVTVTGKLARANWDTGKYAGYSTQPVKLQFRKKTATTYTTVKTVKTSTTGTLKTTTKATVDGYYRWSFAGTSTTPAINATGDFVDVK
>NZ_CP050177.1|WP_167031562.1|4515675_4518498_-|HAD-IC-family-P-type-ATPase
MTQRATSGTDGSATGGTATDGPATGLTPAEVAERVARGEVNDIPVRSSRSTADIVRANVFTRFNLIIGVLWAITFFVAPIQDTLFGFVIIANTGIGIVQEMRAKRTLDGLAVIGEARPVVRRAGVAAALSTSDIVLGDLIELGPGDKVVVDGEVVEADGLEIDESLLTGEADPVLKHPGDPVMSGSFVVAGGGAFRATKVGRDAYAAQLAEEASRFTLVDSELRNGISTILKYVAWMMVPTAAGLIVSQLVVNRNNFKDSLARTIGGIVPMIPEGLVLLTSVAFAIGVVRLGRQQALVQELPAIEGLARVDVVCLDKTGTLTEGGMFVSELRPLGDADETYVRQVLGAIGASDPRPNASLQAIIDAYGGGGMRSGYGDGGTSSAYGDGGAPWRTTEALPFSSARKYSGAAFDEGGGATSGWLLGAPDVLLPEGDPALSEVDRLNERGLRVLLLARVAGGGGAGAGLEAGAGAAGTGAGGGVASWAAGSGRTPGVTAPGADDAAGSTAAGTGPGADHAPEVTAPGSDNAAGRTAPAPGTGTGADHRPEVTAPATDHPPGPTAPAPVPGAAPAPALAAPGVALGAEATALVVLEQRLRPDAADTLRYFADQRVSAKVISGDNAVSVGAVAAKLGLPGAEHTVDARQLPTDPDEMADAIEAGAVFGRVTPQQKRAMVGALQSRGHTVAMTGDGVNDVLALKDADIGVAMGAGSEATRAVAQIVLLDNSFATLPSVVAEGRRVIGNITRVATLFLTKTVYSVLIAILVACFQVEYPFLPRHLTLLSTLTIGVPAFFLALAPNKERARRHFVRRVMRYSAPSGVIAAAATFGTYMLARGHYSGPGSLQAETSAATLTLFLVSIWVLAIIARPYTWWRLLLVVSMVVAFLVVLAVPSLQHFFALKLVGTTLPWAAVAIAGAGAVLLEVAWRWVDRHFHQTVTAAVA
>NZ_CP050177.1|WP_167031565.1|4518674_4518962_-|DUF2530-domain-containing-protein
MTGSPTRTPQREAPEPLEGPVVATIVGGTIIWFVLFLVQLPFYGWFSDHGHTWWIWTCLAGAGLGLIGIWYVRGRDAALKRAAAEGSGPETPPGT
>NZ_CP050177.1|WP_167031568.1|4519007_4519190_-|ribbon-helix-helix-protein,-CopG-family
MGSTVLSLRIDGELLDRLRRHAARRGMTVQDYVVRTLVRDDFDERFQAAVDETEKFYGVP

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Crispr_ID: NZ_CP050177_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_23

4728289-4728387

Orphan

Consensus_repeat	Method
TGTCCTCAAGCGCCGGACGGGCTTGATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_23

>merge|NZ_CP050177|23|4728289-4728387|CRISPRCasFinder
TGTCCTCAAGCGCCGGACGGGCTTGATTCGGGCGGGGGTTGGGTGCGGGTCGGTGGTCGGTGCTGTTCGGGTGTCCTCAAGCGCCGGACGGGCTTGATT

>NZ_CP050177|23|18|4728289-4728387|CRISPRCasFinder
TGTCCTCAAGCGCCGGACGGGCTTGATT	CGGGCGGGGGTTGGGTGCGGGTCGGTGGTCGGTGCTGTTCGGG
TGTCCTCAAGCGCCGGACGGGCTTGATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167032102.1\|4737586_4739092_+\|peptide-synthetase	unknown	unknown	gnl\|CDD\|380454
NZ_CP050177.1\|WP_167032072.1\|4724511_4725126_+\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|223586
NZ_CP050177.1\|WP_167032096.1\|4736092_4736836_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|273824
NZ_CP050177.1\|WP_167032063.1\|4718809_4721788_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|276938
NZ_CP050177.1\|WP_167032075.1\|4725109_4726528_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
NZ_CP050177.1\|WP_167032081.1\|4728448_4729723_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|215608
NZ_CP050177.1\|WP_167032084.1\|4729709_4730246_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|214900
NZ_CP050177.1\|WP_167021945.1\|4711542_4711782_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273721
NZ_CP050177.1\|WP_167032078.1\|4726669_4727089_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167032066.1\|4721908_4722943_+\|2,3-diaminopropionate-biosynthesis-protein-SbnB	unknown	unknown	gnl\|CDD\|274871
NZ_CP050177.1\|WP_167032054.1\|4711840_4715239_-\|peptidase-S41	unknown	unknown	gnl\|CDD\|227282
NZ_CP050177.1\|WP_167032093.1\|4734877_4735975_+\|3-oxoacyl-ACP-synthase	unknown	unknown	gnl\|CDD\|238430
NZ_CP050177.1\|WP_167037225.1\|4733630_4734872_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	unknown	unknown	gnl\|CDD\|238430
NZ_CP050177.1\|WP_161311493.1\|4733280_4733544_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|223314
NZ_CP050177.1\|WP_167032099.1\|4736876_4737590_+\|2-hydroxychromene-2-carboxylate-isomerase	unknown	unknown	gnl\|CDD\|239320
NZ_CP050177.1\|WP_167032087.1\|4730335_4731949_-\|tryptophan-7-halogenase	unknown	unknown	gnl\|CDD\|368139
NZ_CP050177.1\|WP_167032057.1\|4715446_4716019_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_CP050177.1\|WP_167032069.1\|4722946_4724515_+\|anthranilate-synthase-component-I-family-protein	unknown	unknown	gnl\|CDD\|223225
NZ_CP050177.1\|WP_167032060.1\|4716196_4718464_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP050177.1\|WP_167032090.1\|4732162_4733215_+\|2,3-diaminopropionate-biosynthesis-protein-SbnA	unknown	unknown	gnl\|CDD\|274872

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167032102.1\|4737586_4739092_+\|peptide-synthetase	gnl\|CDD\|380454	cd19531, LCL_NRPS-like, LCL-type Condensation (C) domain of non-ribosomal peptide synthetases(NRPSs) and similar domains including the C-domain of SgcC5, a free-standing NRPS with both ester- and amide- bond forming activity. LCL-type Condensation (C) domains catalyze peptide bond formation between two L-amino acids, ((L)C(L)). C-domains of NRPSs catalyze peptide bond formation within (usually) large multi-modular enzymatic complexes. NRPS can use a large variety of acyl monomers (approximately 500 different possible monomer substrates as opposed to the 20 standard amino acids in ribosomal protein synthesis) to construct bioactive secondary metabolites of 2 to 18 units long (with various activities such as antibiotic, antifungal, antitumor and immunosuppression). In addition to the LCL-type, there are various subtypes of C-domains such as the DCL-type which links an L-amino acid to the D-amino acid at the end of a growing peptide, starter C-domains which acylate the first amino acid with a beta-hydroxy carboxylic acid, and heterocyclization (Cyc) domains which catalyze both peptide bond formation and cyclization of Cys, Ser, or Thr residues. Typically, an NRPS module consists of an adenylation domain, a peptidyl carrier protein (PCP) domain (also known as thiolation (T) domain) and a C-domain. NRPS modules may also include specialized domains such as the terminal-module thioesterase (Te) domain that releases the product via hydrolysis or macrocyclization and any of various C-domain family members such as the epimerization (E) domain, the ester-bond forming C-domain, dual E/C (epimerization and condensation) domains, and the X-domain. Streptomyces globisporus SgcC5 is a free-standing NRPS condensation enzyme (rather than a modular NRPS), which catalyzes the condensation between the SgcC2-tethered (S)-3-chloro-5-hydroxy-beta-tyrosine and (R)-1phenyl-1,2-ethanediol, forming an ester bond, during the synthesis of the chromoprotein enediyne antitumor antibiotic C-1027. It has some acceptor substrate promiscuity as it has been shown to also catalyze the formation of an amide bond between SgcC2-tethered (S)-3-chloro-5-hydroxy-beta-tyrosine and a mimic of the enediyne core acceptor substrate having an amine at its C-2 position. C-domains typically have a conserved HHxxxD motif at the active site; mutations in this motif can abolish or diminish condensation activity. An HHxx[SAG]DGxSx(6)[ED] motif is characteristic of LCL-type C-domains.	9.18949e-96
NZ_CP050177.1\|WP_167032072.1\|4724511_4725126_+\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|223586	COG0512, PabA, Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism].	2.8432e-89
NZ_CP050177.1\|WP_167032096.1\|4736092_4736836_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|273824	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. [Fatty acid and phospholipid metabolism, Biosynthesis].	5.00463e-109
NZ_CP050177.1\|WP_167032063.1\|4718809_4721788_+\|transcriptional-regulator	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	4.71463e-37
NZ_CP050177.1\|WP_167032075.1\|4725109_4726528_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP050177.1\|WP_167032081.1\|4728448_4729723_-\|cation:proton-antiporter	gnl\|CDD\|215608	PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional.	1.21675e-71
NZ_CP050177.1\|WP_167032084.1\|4729709_4730246_-\|flavin-reductase-family-protein	gnl\|CDD\|214900	smart00903, Flavin_Reduct, Flavin reductase like domain. This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology.	1.44581e-37
NZ_CP050177.1\|WP_167021945.1\|4711542_4711782_+\|hypothetical-protein	gnl\|CDD\|273721	TIGR01622, transcription_coactivator_CAPER, splicing factor, CC1-like family. This model represents a subfamily of RNA splicing factors including the Pad-1 protein (N. crassa), CAPER (M. musculus) and CC1.3 (H.sapiens). These proteins are characterized by an N-terminal arginine-rich, low complexity domain followed by three (or in the case of 4 H. sapiens paralogs, two) RNA recognition domains (rrm: pfam00706). These splicing factors are closely related to the U2AF splicing factor family (TIGR01642). A homologous gene from Plasmodium falciparum was identified in the course of the analysis of that genome at TIGR and was included in the seed.	0.000128466
NZ_CP050177.1\|WP_167032069.1\|4722946_4724515_+\|anthranilate-synthase-component-I-family-protein	gnl\|CDD\|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	1.20597e-120
NZ_CP050177.1\|WP_167032066.1\|4721908_4722943_+\|2,3-diaminopropionate-biosynthesis-protein-SbnB	gnl\|CDD\|274871	TIGR03944, ornithine_cyclodeaminase, 2,3-diaminopropionate biosynthesis protein SbnB. Members of this protein family are probable NAD-dependent dehydrogenases related to the alanine dehydrogenase of Archaeoglobus fulgidus (see TIGR02371, PDB structure 1OMO and ) and more distantly to ornithine cyclodeaminase. Members include the staphylobactin biosynthesis protein SbnB and tend to occur in contexts suggesting non-ribosomal peptide synthesis, always adjacent to (occasionally fused with) a pyridoxal phosphate-dependent enzyme, SbnA. The pair appears to provide 2,3-diaminopropionate for biosynthesis of siderophores or other secondary metabolites. [Cellular processes, Biosynthesis of natural products].	2.34814e-157
NZ_CP050177.1\|WP_167032054.1\|4711840_4715239_-\|peptidase-S41	gnl\|CDD\|227282	COG4946, COG4946, Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown].	9.32189e-103
NZ_CP050177.1\|WP_167032093.1\|4734877_4735975_+\|3-oxoacyl-ACP-synthase	gnl\|CDD\|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	2.04631e-29
NZ_CP050177.1\|WP_167037225.1\|4733630_4734872_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	gnl\|CDD\|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	4.52419e-147
NZ_CP050177.1\|WP_161311493.1\|4733280_4733544_+\|acyl-carrier-protein	gnl\|CDD\|223314	COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	8.31275e-09
NZ_CP050177.1\|WP_167032099.1\|4736876_4737590_+\|2-hydroxychromene-2-carboxylate-isomerase	gnl\|CDD\|239320	cd03022, DsbA_HCCA_Iso, DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).	2.42633e-30
NZ_CP050177.1\|WP_167032087.1\|4730335_4731949_-\|tryptophan-7-halogenase	gnl\|CDD\|368139	pfam04820, Trp_halogenase, Tryptophan halogenase. Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.	0
NZ_CP050177.1\|WP_167032057.1\|4715446_4716019_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	1.79536e-18
NZ_CP050177.1\|WP_167032060.1\|4716196_4718464_+\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	4.32695e-119
NZ_CP050177.1\|WP_167032090.1\|4732162_4733215_+\|2,3-diaminopropionate-biosynthesis-protein-SbnA	gnl\|CDD\|274872	TIGR03945, cysteine_synthase, 2,3-diaminopropionate biosynthesis protein SbnA. Members of this family include SbnA, a protein of the staphyloferrin B biosynthesis operon of Staphylococcus aureus. SbnA and SbnB together appear to synthesize 2,3-diaminopropionate, a precursor of certain siderophores and other secondary metabolites. SbnA is a pyridoxal phosphate-dependent enzyme. [Cellular processes, Biosynthesis of natural products].	6.20299e-161

>NZ_CP050177.1|WP_167032078.1|4726669_4727089_+|hypothetical-protein
MTLVKVARRIRTLAVVTAAGAAICVSTQIAAQAATQPATGKTTVGVAGSYATASHGVVAEGENPWPLVVTDENPWPAPKSDENPWPVTTDGENPWPAPQGENPWPAGDGENPWPVASDENPWPADPDGENPWPTSVTAS
>NZ_CP050177.1|WP_167032075.1|4725109_4726528_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MVRDGEGRGLPLPGESDGPVLSGEAGGPVPPRESDGRVTLPAAQQPDWPDPAGVEAVRAELRGALPLVIPGECDLLTSRIAAVARGEAFLLQGGDCAETFAGVQADPVRAKVRTLLQMALVLTYAAAVPVVKVGRMAGQYAKPRSEATETRDGLTLPAYRGDAVNDVAFTPEARALDPRRLLRTHQAAAATLNLIRAFTTGGYADLRQAHAWNQDFVARSPVGDRYAELAIQIDQALNFMRACGIDEPVQHAVEFFVSHEGLLLDYEEPLVREDPLTGRMYSSSGHMLWIGERTRQLDGAHVEFFSRIANPIAVKLGPGTSADTVLSLIDRLDPQREPGRLTFVVRMGSELVRDRLPPLVEKAAGHGAAVTWVCDPMHGNTFKAPSGHKTRSFDAIADEVKGFFEVHHDLGTHPGGLHLEFTGGDVTECVGGGTDVLLEDLADRYESACDPRLNRTQSLDLAFLVAGMYSPG
>NZ_CP050177.1|WP_167032072.1|4724511_4725126_+|aminodeoxychorismate/anthranilate-synthase-component-II
MKVLLVDAYDSFTHIIDQYLRTLGADTEVVRSRTRTPAQLAGLLPDAVVLGPGPGHADVSGHVELVRAFAGHVPLLGICLGHQAIALAYGGRVTVAGSLKHGKTSEVSHDGSGVFEGLASPMTATRYHSLIVQEPLPGPLVATAHARDDGYVMGLRHRTLPVEGVQFHPESITTVGGLRLMDNFLSGARRYSPARRESLHGARR
>NZ_CP050177.1|WP_167032069.1|4722946_4724515_+|anthranilate-synthase-component-I-family-protein
MRPAVTTLLDNPPRPARTGRGPFTVRVEERELAPHQPLDLYAELAASYEGAAQEVFVLESVPGPGQSPGATVVGHGVLAEIRVHGDRIALSGAPAVVAALTESAARLGVGTLPGGELAPRDSAQVWDVLRAAQGLFAVETGRPLDTYAFGFLATFGYGSAWHMEELPARRRRPGADADPDIVLSLFRDTLWYGPGSTGVRRLTARSDAFGPAPDHDPVGAALAAVASRDGSVAGAELPAAPRPRSVRDSSDEATFLGRADRCLRHIGVGDIYQIQIGHRIDVDTALGPFEVYRRLRHRNPSPYMYLLPRAGRTVIGASPEVLFRAEGDEVVMRPIAGTAPRSGRPETDEPRVAALVASEKERAEHVMLVDLCRNDVGRVSVPGSLEATGLMALETFSHVFHLVSTVRGTLAEGHDTWSVLGATFPAGTVTGAPKIRAMEIIEELESEPRGMYAGAVGLIDLRGWSQLALCIRTIVHDGRTGTYSTQSCAGIVADSSPEAEWRETLHKMGAAYWALTGEELLS
>NZ_CP050177.1|WP_167032066.1|4721908_4722943_+|2,3-diaminopropionate-biosynthesis-protein-SbnB
MRSAPEVPSFAVIPGAQVARVLDGRHQEVVGLIEAAYRLHGAGDTVNPPSYFLRFPDRPSSRIIALPASLGGGDAVDGIKWISSFPENVAAGIPRASAVLILNDHDTGYPLACLESSIISAVRTAASAVLAARTLTEGRERPPRVGFFGVGLIARFIHQFLAGTGWAFEETGVYDLSAEHAGGFAAYLETTGDNGKVTVHDSAEELIRTSDLVVFATVAGTPHVTDPAWFSHHPLVLHVSLRDLSPEVILSAVNVVDDVEHCLKADTSVHLAEQRTGKRDFLDGTLYDVLTGDLAIPQDRPVVFSPFGLGVLDLALGKHIYDTLRDGGELAVVDEFFHEMRRYG
>NZ_CP050177.1|WP_167032063.1|4718809_4721788_+|transcriptional-regulator
MGDRLCFKVLGPLIVVSGERKVVVGGARQRTVLSLLLLSPGRTVPVDTLVDEVWNGSPPATARTQIAIVVAALRKTFKAEGAGDDTIVTAHPGYLLNTEGHYVDSVDFTELVARAEAEAAEGRLDDAAVLYRRALGLWRGPALAGVSGLAVEEEAARLQEHRLNAYDDATAVQLALGRHYELVPELAGVVREHPLRERTRHHLMLAQYRSGRRAEAMESYREAREVFVEELGLEPGPDLQELHDLILRDDPSLTGEGGSAGPAAVAGAPDVVVVPSELPPDVPGFTGREGELAALDGLVTELAAGEHRPAVGLVTGVAGVGKSGLVVHWAHRVAEAFPDGRLFADLRGYDGEHEPVSVSDVLSRFLRSLGVRGPQVPDALEERVALYRSLLSERRVLIVLDNVRTFAQLRPLLPGSGASCALITSRDQLEQLVTWPHAARVHLGVLPRQEAVELVGRIAGEERIAARADVVRLVELCDRLPLAVRIAAARLASKPHWSVRHMVGRLSDERRRLDELSQGESQVRAGFELSYRYLPLLSARLYRCLGLVDVPDFTSWVAAALLDVDVLDAELLLEDLVDAQFLEVVGIDATGRLRYRLQNLLRLYAAERARQDDPAGERQEALRRVFATGLSIAEEAHRREHGGDFSIVHSGVSRRLVDSELLEELLVDPLEWFEAERLCLVGMVEQAARMGMAGLAWDLTVSSAVLFETRGYIDNWRVCAGVALDAARAAGDVRGQAAMLQHQGAIALSHHSMDDAVARSLEALELFASAGEELGRALVLRNLAVAYRITGEVDRVAECLTAALPVFRAVGDRSSEASALQSMAQLELDRGDPAAALGHALEAVRVAEPLGSGGSRNLAQSLYRVGSAQFALNRFAEAEAAHLRVEELSRAKCDDHGLAHALFGLGQARAALGAVEQAERAFVEGRSIAQGIDSPLIEGRIRLGLGVLLGERGRWEEGRVDVLRAGELFKRSGATPWEEEVARVLGEFGTSG
>NZ_CP050177.1|WP_167032060.1|4716196_4718464_+|MMPL-family-transporter
MATFLYKLGRLAFRRRWRVLLTWLALLAIAAIAAFSASAPTSSSFSIPGTEAQRAFDLLDQRFPGSSSDGATARVVFKAPAGEKITEAGNKAEVKKIADEIRAGSSQVESVNDPYTSGGVARNGTTAYLSVSYKVGSEALTDATRTALEEAGADAKSQGMAVEIGGDALQVAPETGSGEIVGVAIAAVVLVITFGSLIAAGLPLLTALLGVGVGISGITALATVLDLGSTTSILAMMIGLAVGIDYALFIVSRYRAELAEGREREEAAGRAVGTAGSAVVFAGLTVVIALSGLAVVNLPMLTKMGLAAAATVVIAVLIALTLTPAMLGFVGKRVFGRKARAAMANADAQALAGVRTPEAKPNMGTRWARFVLRRPVAVLLVGVLGLGAVAVPAASLELGLPDDGSQPVSTTQRKAYDLLSDGFGPGFNGPLMLVVDGQADNNAKAAALGISATVKKMDDVVTVLDPVLNKAGDTATVTVIPKDRPSSVRTEELVHDIRSAASKARAENGAEVYVSGATAMNIDFSQRMNDALLPYLALVVGLAFLLLMLVFRSVLVPLKAALGFLLSVVAALGAVVAVFQWGWLGGLLGVEQTGPIMSMMPIFMVGVVFGLAMDYEVFLVTRMREAYVHGERPGEAIVTGFRHGARVVSAAAVIMIAVFAGFIGASDAMIKMIGFGLAVAVFFDAFVVRMAVVPAVMALLGRRAWWLPRWLDRALPNVDVEGEQLRKRLGDDAEGTGDFRGPDGGPGSERELVRV
>NZ_CP050177.1|WP_167032057.1|4715446_4716019_+|TetR/AcrR-family-transcriptional-regulator
MVGTRLTPQRETELYGTVLDLLREVGYDALTMDAIATRTRSSKATLYRQWGSKPVLVARAIRCNKPDASQVADTGSLRGDLHAMAALADDARMQRDVALMRGLFHAVHGNPDLHEALREVMVEPDANGLQVLLDRAVVRGEIAVDHPALPFVPHMLVGAFVARQLIDDRSVDRAFLVAFLDAVVLPALGV
>NZ_CP050177.1|WP_167032054.1|4711840_4715239_-|peptidase-S41
MSDDVAYLRFPHLHDDLLCFAAEDDLWVAPLVPAGHRPGRAWRVTVDRTRIGHPRFSPDGSLIAYTTWRSLDPEIHLAPVDGGPARRLSHWGSTDTRVCGWTPPGEDGAAQILAVSSHGQPFSYYSWAYSVPTDGSPGSQLPWGPVADLAVADVDGEHRTLLLTGKPPHEPAAWKRYRGGATGRLWLHGERLLADLGGHLDSPMFVDGRVAFLSDHEGVGNLYSVLPDGTDLRRHTDHDAFYARHASSDGRRVVYQCAGDIWLVDALTPDSVPRKLDVRLGGPRAGRRAYQVPAASHVDAVSVDTTGRASAVSVRGSLYWLTHRDGPARTIADTPGVRVRQPDMLGAGGQVAYVTDADGEDAIEIAYLPRATGDHPPRRLASGHLGRVHEMVSSPTGDRIAVASHDGRLLLIDTTEEAEAEAGAGQAAEAAPTAAGAARTGSTLWKPPDGSGVVTEVIRSINGPVADLAFSPDGDWLTWSHPGVGRTLRQIKMARIAGSADRTIIDVTNGRFEDENPVFTSDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSPFALSPDGRPAAGGLDPAMTDADAGEGTVTVEEEGLAERVTPFPVAASKYSALHPVSGGGLVWLRWPISGALGETFANPADTSGRPTLEHFDLTKARKTELVAHLDWFAPSGDGTRLVVVDDDELRAVPATEPGDSDSTVHLDLRRILHEVDPEAEWRQAYEEAGRVIRSYFWEPDMCGIDWDAVLAQYRPLVERVASPDEFADLLREVLGELGTSHAYVTPARRNEGPRHYQRAMGLLGANLVCRDGKWMVRRILPGDSSDSKARSPLAGTGIREGAILTHVDGRPVDPVAGPGPLLSAAGGTTVELTFRPAAPDGTVTPDGPSRRVAIVPLIDERPLRYQDWVAKRREVVREISGGRCGYLHIPDMGGSGWAQFNRDLRLEVSRPALIVDVRGNAGGHISELVVEKLTRRILGWDLTRDAQPVSYASNAPRGPVVAIADEATASDGDMITAAFRLLNLGPVVGQRTWGGVVGITGRHRLGDGTVITVPMNAAWFDAYGWSVENHGVDPDIEALRTPLDWAEGRHAQLDDAVWVALDLLAAHPAATPPGYNAVPDLRRPALPPRTTD
>NZ_CP050177.1|WP_167021945.1|4711542_4711782_+|hypothetical-protein
MGIADQFKDKAQEIQDKARSRMTSDQEKDAGGSGRERGEGGRADGREDRDMDRDMDRDMDRDMDRDMGRDRDRDRRRDA
>NZ_CP050177.1|WP_167032081.1|4728448_4729723_-|cation:proton-antiporter
MSAPDPLPDLLVAIPVVILACQAGALLVRRLGQPPVIGEITIGIMLGPSLLGWISPDAQAWLFPDTVLPYISAIGNLGLLAFMFLVGLELDTGGLRGHSKTALAVSQASIALPLALGALLALAMYGTFAPPGVDKTAFVLFIAVSMSITAFPVLARILTDRDLYGTRLGSLAMACAAVDDVTAWCLLAAVVAVTTSGSPAEALTTALMAAAFLGLMLLVVKPLMARWSARTAKSADSVVLVVLFSGLCLSALATDRIGVHALFGAFVFGVVTPRGSRAVERSGARLRAFAVPVLLPLFFVSTGLRTDVSLLAGDPVQWLWALAVLAVAVIGKWGGSTAAARAAGQSWRDALSIGALMNCRGLTELVVLNLGLELGVISQRLFTILVLMALITTAVTSPALTWIRKDTKSPAPDPTPLPEPATTR
>NZ_CP050177.1|WP_167032084.1|4729709_4730246_-|flavin-reductase-family-protein
MTEPPITEADIRPLMGGFPSGVSVVTTTGAGGTPHGMTCSSLASVALHPPTLVVCLRTAGPTTQAVLGSGQLALNLLHEDARDTSDLFASGAADRFARTEWRLPLGAGGPHLTAAAHAIADCAVVGTEEVGDHTAVFVRVHRVTQHDTAEPLLYARRRYARWSDATTDAKEGAGHVGS
>NZ_CP050177.1|WP_167032087.1|4730335_4731949_-|tryptophan-7-halogenase
MTGTRSAQDVAIKKVVILGGGTAGWMTAAYLGKALQNTVDITVLEAPSIPRIGVGEATVPNLHRVLFDFLGIAEEDWMRECNASYKMAVRFVNWRTGGKGQAGPRELEKGGPDHFYHPFGISPDHDNTPMSHYWFKNKYEGKTDEPYDYACFREAPLMDAKKSPRHLDGTSPTRYAWHFDAALVADFLRRFSTEKQGVHHVQDEMTYAEKDERGYIHALHTKSGKVLEADLFVDCSGFRSLLMNKAMEEPFIDMSDLLLCDRAVATAVPHDDEANGVEPFTSAIAMSSGWTWKIPMLGRFGTGYVYSSKFTTQEEATQEFCDLWDLDPETTKFNHVKFRVGRNRRAWVKNVVGIGLSTAFLEPLESTGIYFITAAVYQLAKHFPDKTFNDALINNFNKEIEVMFDDTRDFIQTHFYFAPRNDTPFWRANKELKLPDSIREKIEIYKSGLAVNSAITDDSTYYGNFEAEFRNFWTNERYYCIFAGLGLEPDAPLPVLNHKPESVAAAQAMFGQVKKEQQELLNTLPSTYESLLQLHGK
>NZ_CP050177.1|WP_167032090.1|4732162_4733215_+|2,3-diaminopropionate-biosynthesis-protein-SbnA
MPSTEGKPEAGLKGILSTVGGTPLVELERLIPGFTSRVYAKVERFNPGGSVKDRSALSMVVTRIRSGELVPGRSTVIESSSGNLAIGLAQICGYYGLRLICVVDTRTTRQNIGILRAYGAEVDIVTEPDPVTGELLPARLHRVADLMARTPDAYWPDQYANPLNPRAHRTTMREIAEALDGKVDQLVVAAGTSGTLSGCAQYIRRHHLGTVVNAVDAVGSVLFESTASCARLVPGHGASVVPKLLRRSDADRVVHVGDLDCVVGCRTLVGREAILAGGSSGAVVSALVKLAPTIEPGSNVVVVLPDGGDRYLDTIYDDDWVRTHFGEVEHLWKNQVRDAPTGQLADIGQS
>NZ_CP050177.1|WP_161311493.1|4733280_4733544_+|acyl-carrier-protein
MTTQIADLDSGSKAQIKEIVCDILELEPEELTETSLFKEEHDADSLRTIEILAALERTFGLTLEQAELSRMVNLTGVYAVVAEAEGK
>NZ_CP050177.1|WP_167037225.1|4733630_4734872_+|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein
MVITGLGVVTSIGTGVDAFAEGLRAGRSGAKPISAFDTTGFAHSNACEITDFEPEAWLRELSADELGRAAQFAVAGSRMAVADAGLAEEDVQARRTLVSIGTTDGESRDLDHLTALQVTEGQDRLDATVARRVWPGRLSAGIVRELGLEDVETVTVPTACAAGNYAVGYGYDAISSGDVEMALCGGADALCRKTFTGFYRLGTIAPDVCRPFDTDRQGILTGEGAGILLMESLESALARGARIYAEVLGYGLSCDASHPVAPDRDSIARCITAAHRNAGIEASDVDFISAHGTGTRANDVTEVGAIRQVFGDELPRTVSIKSMIGHTMGAASALASAACSLALREGFIPPTINHRTTDPECGVDCVPNEAVEAELKVVQNNGLAFGGNNAVLVLGRWDDDASEQANGSSQERS
>NZ_CP050177.1|WP_167032093.1|4734877_4735975_+|3-oxoacyl-ACP-synthase
MATEADQHGAQDLVISGWAVSSPYGLGREAFGEGLRARRRAVAAVDGDRWPVPYEEAGLIPGFDIKSVLGRKGTRSMDRATGIAVTTVGTLLEDYGQELAAHPESTGLVLGTSGSVQSIMDFTKDALTGDKPYLVDPARFPNTVMNCPTGQSAIRHTLKGPNVTVSGGAATALLALNYASRLLRGQHATALLAGAAEEFSVQRARLEQVADHGGAEAPPLGEGAALFLLESGQAAHDSGRTVLATVLGCRFRAFRSVDRASAGLRTCVDDVLRAAGADPGDVALVAPGTPPGLLGKEETSALDTVGGTRLAVRPLLGDATAASAALQLAAVLATRADDPSLAGRLALVTAVDRDGTVGAALLRLG
>NZ_CP050177.1|WP_167032096.1|4736092_4736836_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MSDTPRPVALVTGGSRGIGRAVVEVLARDGHDVALCYRSNDEAAALAVKSAEAHGARAFAQQVDVTDREQVRAFVTRTERTLGPVDTLVTAAGIVRDSNLATMADEDWDAVVRTNLDGTYNFCRAVSFPMLKRRRGTVVTLSSVAAEGQAGQTNYSASKAGIIGFTKALAKEGGRAGLRANVVAPGFVRTDMTGGLSEKYAKDMTKLIPLGRFGEPEEVAELVGFLASRRAAYITGQVFSIDGGLVL
>NZ_CP050177.1|WP_167032099.1|4736876_4737590_+|2-hydroxychromene-2-carboxylate-isomerase
MAARAAKPPRLYFNLRSPYSFFALRDMERDCPEILDRLEWHPFWEPDGTSEKLLAEALPGAAFPYQAMTRAKQFYILRDVRRLGAERGLRLTWPLDRDVWWEPAHLAWFVAERAGLGRVWVERAQRARWLEGRDICDPAVVRELAEEIGLDGEEVAGATDDTLIREQAAQALVDVVRDGVFGVPYFINGSEPYWGLDRVSAFVASLPAAPEPVAREPEPAALVPGRATDIGHAGGCG
>NZ_CP050177.1|WP_167032102.1|4737586_4739092_+|peptide-synthetase
MSTATDTGATHTAATATATATATDAALGTAASGTLPLTAIQEAMWTAYRMAPDSSAYNIVMPLLLRGPLDPAAMAAAVTAVGDRQELLRSAFTERDGTPVRTAAASAVVRLESLDLRDADTESFHRAVEQAGARPFRLESAPFRVVLVRGPGDRWGLVTAAHHIVSDFTSRWLLVRDLLDAYAGLAAGTEPAWRALPASYTDHAAEELRYTGSEAGARAAGLWRESVAGSPAAELPLDRPRPAVRSLRGGTVVRPLAAEVTDGLGAAADDAGVTPFAYLLGVFQALTHRWTGQENFVLGVPATSRMGRAQRDVIGCFLNTMPLRADFDAASTFREVARQAGERIMRGMINVRYPCSLAFPQATVFRTALFLVQMDRMDPPVPGVPPGERVGPAVPYAGLDVALIDVPQQEGQLDLLLRIEQTPTGVSAVFSYDTDVLDRSTVERFADGYERLLAAAVSSPATLVADVELAGRDETDALLALGAGTTADFGDFDSFENSWDH

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Crispr_ID: NZ_CP050177_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_24

5356853-5357100

TypeII

Consensus_repeat	Method
GGCGCCCCGGCCACCGGCGCCCCGGCCGC	CRISPRCasFinder

4 spacers

Cas9_archaeal

The CRISPR arrays of NZ_CP050177_24

>merge|NZ_CP050177|24|5356853-5357100|CRISPRCasFinder
GCCGCCCCCGACCCGGGCGCCCCCGCCGCGAACCCAGCTCTCGCGGACCCAGCCGCCGCGGATCCAGCCCCCGCCGACCCGGGCGCCCCGGCCACCGGCGCCCCGGCCGCTCCCGACCCGGCCGCCCCCGACCCAGCCGCCGCTGACCCGGGCACGCCATCCACCGGCGCCCCGGCCACCGGCGCCCCAGCCGCCCCCGACCCGGCCGCCCCCGACCGAGGCGCCCCCGCCGCCGCCCCCGGCGACCC

>NZ_CP050177|24|19|5356853-5357100|CRISPRCasFinder
GCCGCCCCCGACCCGGGCGCCCCCGCCGC	GAACCCAGCTCTCGCGGACCCAGCCGCC
GCGGATCCAGCCCCCGCCGACCCGGGCGC	CCCGGCCACCGGCGCCCCGGCCGCT
CCCGACCCGGCCGCCCCCGACCCAGCCGC	CGCTGACCCGGGCACGCCATCCACC
GGCGCCCCGGCCACCGGCGCCCCAGCCGC	CCCCGACCCGGCCGCCCCCGACCGA
GGCGCCCCCGCCGCCGCCCCCGGCGACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167037461.1\|5346713_5347640_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP050177.1\|WP_167033041.1\|5366518_5367040_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP050177.1\|WP_167033017.1\|5350679_5351759_-\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NZ_CP050177.1\|WP_167033018.1\|5352038_5352575_+\|HNH-endonuclease	Cas9_archaeal	cas9_archaeal	gnl\|CDD\|224321
NZ_CP050177.1\|WP_167033011.1\|5345803_5346712_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP050177.1\|WP_167033021.1\|5352972_5355996_-\|hyaluronidase	unknown	unknown	gnl\|CDD\|369423
NZ_CP050177.1\|WP_167033036.1\|5362352_5364932_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|274121
NZ_CP050177.1\|WP_167033010.1\|5344532_5345798_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_CP050177.1\|WP_167033032.1\|5360753_5361596_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP050177.1\|WP_167033038.1\|5365285_5366314_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237845
NZ_CP050177.1\|WP_167033027.1\|5358975_5359230_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033023.1\|5356303_5356528_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP050177.1\|WP_167033045.1\|5367899_5371205_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173796
NZ_CP050177.1\|WP_167033043.1\|5367042_5367786_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033028.1\|5359298_5360498_-\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl\|CDD\|275041
NZ_CP050177.1\|WP_167033013.1\|5347723_5349070_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP050177.1\|WP_167033030.1\|5360494_5360635_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033015.1\|5349264_5350434_-\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP050177.1\|WP_167037458.1\|5343519_5344536_-\|ATPase	unknown	unknown	gnl\|CDD\|225518
NZ_CP050177.1\|WP_167033034.1\|5361592_5362180_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167037461.1\|5346713_5347640_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	3.13999e-70
NZ_CP050177.1\|WP_167033041.1\|5366518_5367040_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	5.49459e-24
NZ_CP050177.1\|WP_167033017.1\|5350679_5351759_-\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.91831e-43
NZ_CP050177.1\|WP_167033018.1\|5352038_5352575_+\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	2.10152e-23
NZ_CP050177.1\|WP_167033011.1\|5345803_5346712_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.972e-85
NZ_CP050177.1\|WP_167033021.1\|5352972_5355996_-\|hyaluronidase	gnl\|CDD\|369423	pfam07555, NAGidase, beta-N-acetylglucosaminidase. This family has previously been described as a hyaluronidase. However, more recently it has been shown that this family has beta-N-acetylglucosaminidase activity.	1.10159e-137
NZ_CP050177.1\|WP_167033036.1\|5362352_5364932_-\|aminopeptidase-N	gnl\|CDD\|274121	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type. This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).	0
NZ_CP050177.1\|WP_167033010.1\|5344532_5345798_-\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP050177.1\|WP_167033032.1\|5360753_5361596_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.52707e-09
NZ_CP050177.1\|WP_167033038.1\|5365285_5366314_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	0
NZ_CP050177.1\|WP_167033023.1\|5356303_5356528_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00107741
NZ_CP050177.1\|WP_167033045.1\|5367899_5371205_-\|S8-family-serine-peptidase	gnl\|CDD\|173796	cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_II, Peptidase S8 family domain in Tripeptidyl aminopeptidases_II. Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing.	1.67187e-55
NZ_CP050177.1\|WP_167033028.1\|5359298_5360498_-\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl\|CDD\|275041	TIGR04188, conserved_hypothetical_protein, methyltransferase, ATP-grasp peptide maturase system. Members of this protein family are predicted SAM-dependent methyltransferases that regularly occur in the context of a putative peptide modification ATP-grasp enzyme (TIGR04187, related to enzymes of microviridin maturation) and a putative ribosomal peptide modification target (TIGR04186).	3.29619e-86
NZ_CP050177.1\|WP_167033013.1\|5347723_5349070_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.28921e-76
NZ_CP050177.1\|WP_167033015.1\|5349264_5350434_-\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.99517e-38
NZ_CP050177.1\|WP_167037458.1\|5343519_5344536_-\|ATPase	gnl\|CDD\|225518	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism].	3.53544e-20

>NZ_CP050177.1|WP_167033023.1|5356303_5356528_+|hypothetical-protein
MAAPAPRLVPGPSERPAPRPSVPGPAQPAGPLTSEPPLADAAPLTSEPPLADTAPLTSEPTAPGTAGGTESPGV
>NZ_CP050177.1|WP_167033021.1|5352972_5355996_-|hyaluronidase
MRLGRTGRTATAVAVAVIGGLLGGAPGAYAAPGDKGAPVAATPAHAGRAAVPDVWPRPQTIEAAGRAVPLGDLVTVVVGEDADPVAVQALTDLLRTAGVRTVGQAAATDPLGAGTVVLAGGTRAREALRALRAGDGAGLPSGGYRLAVGKVAGRDTIALDGVGEDGLFHGAQTLRQLIVKPRNVKPRNVKPGAKAGAGATVPGVVVRDWPGTLVRGTTEGFYGEPWTPRERLAQIDFMGRTKQNRFLYAPGDDPFRQARWRDPYPAAERAAFRELAERAARNHVTLAWAVAPAQSMCMTSGDDLRALNRKIDAMWALGVRAFQLQFQDVSYSEWHCDADADTFGSGPEAAARAQARVANAVAEHLAERHPDSEPLTVMPTEYHQDGVTAYRTALAGTLDGGVHVAWTGVGVVPRTITGRELAGAKAAFAHPMVTMDNYPVNDYEPGRIFLGPYTGREPAVAGGSVALLANAMEQASASRVPLFTAADYAWNPRGYVPAESWRAAVDDLAGEDTAAREALRALAGNDASSLLDRSESAYLKPLFTAFWASRATSDARARSEAAARLRAAFTVMAGAPERLSATAGGRLDDEVRPWLDQLARYGQAGELAVDTLTAQDRGDGAAAWRASLALEPLRGKLRASEAVVGEGTLGPFLDRAVKAAAGWTGADRDTGGDVARDAGSYTVRLDRARPVTAVTAMTEPGTGAGARVEVRVPGAGWRPLGALSTSGWTQADAQGVLADAVRIVWPAAGAASGVLGPGAPAPAVRKVVPWFADEPGARLDLAPREADAQIGGKPERVEARLEGRRPGEVRGSLTAKAPSGIRVTAPKETTVPRGADTTVPLEVRVKAGTPAGSYEVPVAFGDERSTLTVRASPRTAGPDLARGAAASSSGDETPDFPASAAVDGDPATRWSSPVEDGAWWQVELPGAARVGQVVLTWQEAYASRYRVQVSADGRTWRTAATVTDGRGGREAIGMDAKDTRFVRVQGDTRATKYGYSLFSAEVYAVAP
>NZ_CP050177.1|WP_167033018.1|5352038_5352575_+|HNH-endonuclease
MPHVLVLNASYEPLGVVPLRRALVLVLENKATSLEESGAFMHSATRVVPAPSVVRLKRFVRVPYRGPVPLTRRALFARDGGRCMYCGAVATSVDHVVPRSRGGQHAWDNVVAACRRCNHVKADRHLRELGWRLHQQPAPPSGLAWRIIGTGHRDPRWMPYLQPYGAEDAVARIDGISA
>NZ_CP050177.1|WP_167033017.1|5350679_5351759_-|mechanosensitive-ion-channel
MSWSALSAAAPPSGPGTLEGAAGRANDAAGWVEENWSTWLSVGLRIVLILVIALVLRHVIRRALTKLIDRMNRSVQAVEGTALGGLLVNAERRRQRSEAIGSVLRSVTSFLILGTAALMMLGALNINLAPLLASAGVAGVALGFGARNLVTDFLSGVFMILEDQYGVGDSIDAGVATGEVIEVGLRVTKLRGENGEIWYVRNGEVKRIGNLSQGWATAAVDVMVRPSEDLEKVRAVIRQVAETMAKDDPWAERLWGPIEVLGLDSVLLDSMTVRLSAKTMPGQSLSVERELRWRVKRAFDEEGIRIVGGVPPQVDEEPADPSAGVSAPSALSSPTSPQSQAASPLTPQVPPPTAQGPGK
>NZ_CP050177.1|WP_167033015.1|5349264_5350434_-|ROK-family-transcriptional-regulator
MSGSSTPSPGTPSVLRAMNDRAALDLLTAHGPLTRTRIGELTGLSKPTASQLLTRLESAGLVRTTGSQSGRPGPNAVLYEIDPRSGHVAALSAGPTGIDAVVADITGAVVGSCRVEAGPAAKDVGHRTAQLVAEAVNGALLAAGLDHDDLRCTVIGTPGAIDPHTGQLRYAPHLPGWHSRTLRADLAEVLGTPVFIENDVNLAAIAEQYEGAAQDHDDFVLAYLDEGVGAAIVLGGTLLRGATGGAGEIGYMPLPGAPLARGGVRDWAGDDAGGGFQSQVSTPAVRKLAGGVPLAEALADEAVLDQVAAMLATGLAAVVAVVDPELVVLSGAVAEAGGEALRKRVETELTGLILPRPLLRISDLDSDPILTGALRSALTQARDTVFDTT
>NZ_CP050177.1|WP_167033013.1|5347723_5349070_-|ABC-transporter-substrate-binding-protein
MARWRIRTCVSAALAASALLLSGCANPSTGSDTDDPTKPVTLKFWHGWSAPGEVKAINANIARFEKLHPNIKVVSTGNVGDETINQALRAGGSKAPDVVTSFTTNNVGQYCSSDMWVDLDPFFKKSGIDKAKVFPKTLLDYTQYQGVQCAVPLLADAFGMYYNKDAFKAAGIARPPRTMSELKADAVKLTVKNKDGSIKRAGFMPNYQLYQNAPDRMFAQWGPQYFDAKGKARLADESKTEDFFSTMKSVADAQGGYAAMERLRQTFGDEYSNGNAFLNGKLAMHLDGEWRGLMLDDEKAKFDWGVAPLPVPDDQADTYGRGYLTGTVAGIAHSSMHQNAAWELVKFLTVDTDSVVSFANAIHNVPSTNEALRSPKLDQDPAFQEFLKIAQNPHSQAVPPSNNGGQYINSFGDFSQSVESGRTPLKDLHGALKELDDQIDADNVQSEN
>NZ_CP050177.1|WP_167037461.1|5346713_5347640_-|sugar-ABC-transporter-permease
MRRKQNRDRLRTLGFLSPWLIGFSVFFAYPLIATVYFSFMHYNQIKAPDFVGLRNWKYVFQQMPLFGPALWNTMWLVVVMVALRVAFGLGIGLLVTKIKTGVGLFRTAFYIPYLAPPVAATVAFVFLLNPSTGPVNEMLGWIGLHGPNWFNDPNWSKPSLVLLSVWGIGDLMVIFMASLLDVPKEQYEAADLDGAGAWSKFRYVTWPAITPIVLFAVVTGVVQTMQYYTQALVAGKLASGVSIGPGTVIQPGYPDHSTLTVPQLVYSLGFQNFNTGAACVLSLVLFAIAMAVTLLLMRKSVGLIPAED
>NZ_CP050177.1|WP_167033011.1|5345803_5346712_-|carbohydrate-ABC-transporter-permease
MTTTTLTAPPATAAGRTRDRGPDAARHRRKQILNWIAVHSVALALALFFVLPFVFVFLTSVMSDGQALSGDLWPTSWHWSNYSTVFHTPGFLTWWRNSLVYAVLGTVFTVCSSVPVAYALAKFRFRGRRTAMILVISTMMLPPQVIIIPMYLVWAQQFHLSGSLWPLIIPMAFGDAYSIFLLRQFLLTIPQEYIESAKVDGCGELRTLLKIVVPMAKPGIAAVALFQFFYCWNDYFGPQIYAAQNPGAWTLSYGLESFKSAHSVNWNLTMAATLLVMAPVIIVFFFAQKAFVEGVTLTGVKG
>NZ_CP050177.1|WP_167033010.1|5344532_5345798_-|6-phospho-beta-glucosidase
MKLAVVGGGSTYTPELIDGFARLRDTLPIEELVLIDPSADRLELVGGLARRIFAKLGHPGRITTTSDLDAGVEGADAVLLQLRVGGQAARNQDETWPLECGCVGQETTGAGGLAKALRTVPVVLDIAERVRRTNPDAWIIDFTNPVGIVTRALLEAGHKAVGLCNVAIGFQRKFAALLDVAPSEVFLDHVGLNHLTWELGVRLGGPEGENLLPKLLSEHGTAVAEDLHMPREIVDRLGVVPSYYLRYYYQHDAVVRELREKPSRASEVAAMEKQLLEMYGDPTLDEKPELLAKRGGAFYSEAAVDLAASLLRGGGSPVQVVNTYNNGTLPFLPDNAVIEVQAKVGTTGAVPLAVPELDPLYAGLIANVTAYEDLALQAAVHGGRDRVFKALLSHPLIGQYEYAEALTDQLIAHNREHLAWA
>NZ_CP050177.1|WP_167037458.1|5343519_5344536_-|ATPase
MSVGTGTAGPAAGRGSVLAVDAGNSKTDVAVIGADGSVLGTARGGGFQPPVVGIEAAIDILEVAVAEAASAAGLPERDFADHVSACLANADLPVEEAELAEAVQARGWGRTTDVRNDTFAILRAGLPSGAAPRGVAVVCGAGINCVGMLPDGRTARFPALGRISGDWGGGSGLAEEAMYHGARAEDGRGGPTELVRTLPGHFGLATMYDLIEALHRGHIPYARRHELTPVLFATSAAGDPVARSLVDRLAEEVVALSTVALGKLDLLDEEAPVLLGGSVLAARHPQLDDGIAERLAAKAPKAYVEVVTAPPVLGAALLGLDHVGASAEAHVRLGEHFG
>NZ_CP050177.1|WP_167033027.1|5358975_5359230_+|hypothetical-protein
MDKKNAMRAGALAAGTTLMMLLMTSPALALTRDDGDDPGPGLSVAETLGLFVGIPLLLFAVITGLVMVLDKSHPSHRVTKPKQG
>NZ_CP050177.1|WP_167033028.1|5359298_5360498_-|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MNERGVTEAGPEGLASRLLDAGALTPDWLAAYRAVPRELFVPDVVWTGVGAGTGRAEAVVRGEDPEAWLRAVYSDGSLTTQWDDGAHTGTLRGKVPTCSNTQPSVVFSMLRALDIPPDVPPEFAALEVGTGTGWNAALLSERLGSSHVVTVEFDGDNAAAARLRLDAAGYQPATVVADGSEGWPARAPYDRVLVTAGVREIPGEIVRQTRAGGIIVCPYGTPYGAEAVVRLTVHEDGSASGPFVMDSAFMRLRQQRENWPHTREYLGGDWPADGRRSETGLSPEEVADWLPRFVLGLQLSGTAPFREPDDDGSYVLWLRDDKVTSWATVDYVPDKDTFLVYQGGPRALWGEVEAAYTWWNGQGRPGLERFGLTLTPDGVPRAWLDSPEQPVPAVGQGLS
>NZ_CP050177.1|WP_167033030.1|5360494_5360635_-|hypothetical-protein
MGTHGGGTGSGQGGSQQDDSNSGPKHGGGGSGDGDVNRDDSKPAQK
>NZ_CP050177.1|WP_167033032.1|5360753_5361596_-|helix-turn-helix-transcriptional-regulator
MTTDFQQARTALGARLRELRTDRCLTGRQLAARLGWPQSKVSKLETGRQTATTEDLRAWAESTEHPEAAGELISRLRSLESRTRSWRRQLAAGHKPVQDALTVEYERSRTVRCWESSLVPGMLQTAEYARHVFTRYADLHQSVRDTEEAVRARVKRQELLYTPGRTFHIVMWEAALRALVCPPPVLAAQLDRLVGVLGLDTVSLGIVPLGAPLKIPPANAFWLYDDRLVIAEDWHAELWLDDADSVGMYGKVWQTLAESAVYGAEAHRVIACARHALGTA
>NZ_CP050177.1|WP_167033034.1|5361592_5362180_-|hypothetical-protein
MARRLRFIGTNSGNSGCPTLYEDLDTGEVLVQGDVVTDPEDLAQLRNVKDSEGLVVVPRVLLADFAPRDADRVPQVITWDEFEDMFRKCEHGAWRLESRRRYASDEETETYRRFTSGEDPGWDLDDPWCLGRKQQTSLGKRFERVRVVDDPPTVGQRYLLDNARRNIAVGEDIRNLWRAEAECLRLPVEQVPPAE
>NZ_CP050177.1|WP_167033036.1|5362352_5364932_-|aminopeptidase-N
MPGTNLTREEAQLRARLLTVDSYAIDLDLSGAQEGGTYRSVTTVRFDSAEAGAETFIDLVAPAVHEVVLNGTPLDAAAVFKDSRIALPGLLEGPNDLTVVAECAYTNTGEGLHRFVDPVDEQAYLYTQFEVPDARRVFASFEQPDLKATFQFSVRAPEGWTVISNSPTPEPKDNLWHFAPTPRISTYITALIAGPYHAVHSTYEKDGQSVPLGIYCRPSLAEFLDADAIFEVTRQGFAWFQEKFDYDYPFAKYDQLFVPEFNAGAMENAGAVTIRDQYVFRSKVTDAAYETRAETILHELAHMWFGDLVTMEWWNDLWLNESFATYTSIACQADAPGSRWPQSWTTFANSMKTWAYRQDQLPSTHPIMADIRDLDDVLVNFDGITYAKGASVLKQLVAYVGQDEFFRGVQAYFKAHAFGNSRLSDLLGALEETSGRDLKSWSKAWLETAGINILRPEITLDASGHVASFFVTQEAPALPAGAKGEPVLRPHRIAIGCYDLDANGKLVRTSRIELDVDGERTEVPFPQNTPRPAVVLLNDDDLSYAKVRLDEESLRVVTAHLGDFAESLPRALSWASAWDMTRDGELATRDYLALVLSGISKETDIGVVQSLHRQVKLALDLYAAPVWRETGLTQWTEATLAHLRAAEPGSDHQLAWARAFASTARTPQQLDLLQGLLDGTETVEGLAVDTDLRWAFVQRLAAVGVHDTEEIAAEYERDKTSAGEQHAAAARAARPTAEAKAEAWASVVESDKLPNSLQEAVIGGFVQTDQRELLAPYTEKYFAAVAEVWESRSHEMAQQVAVGLYPSLQVSRETLDATDAWLASAGPNAALRRLISESRAGVERALRAQQADAAAAPSA
>NZ_CP050177.1|WP_167033038.1|5365285_5366314_-|aspartate-semialdehyde-dehydrogenase
MKVGIVGATGQVGTVMLRILAERNFPVTELRLFASARSAGSTLDWRGEPVTVEDSGTADWSGLDIVIFSAGGSTSKALAEKVAAQGAVVIDNSSAWRRDPQVPLVVSEVNPHAIKDRPKGIIANPNCTTMAAMPVLRPLHDEAGLAALVATTYQAVSGSGLAGVAELHEQAKRVVADADRLTHDGGAVEFPAPAVYQRPIAFNVVPLAGNLVDDGSFETDEEQKLRNESRKILEIPELKVSGTCVRVPVFSGHSLQVNVRFDRPISVERAYELLKDAPGVELSDIPTPLQAAGKDASFVGRIRVDETVENGLALFVSNDNLRKGAALNAVQIAELVAAELTG
>NZ_CP050177.1|WP_167033041.1|5366518_5367040_+|sigma-70-family-RNA-polymerase-sigma-factor
MRIRRSPGAAADPLDEVQAGRVRAVLALGGVPQADLPDGLQQVRLRLLERRARGQEPPRDVGAWAAVVASNLAADWHRTHHRQERVSARLTLLSAPDAGVQGGPESGLLAMAVAEALDGLPEAQRQVLVLRYYADLSVPRIAEELGIPVGTVKSRLFAAAKLMRERLRLEEVV
>NZ_CP050177.1|WP_167033043.1|5367042_5367786_+|hypothetical-protein
MDRDEHLMAVLLGESVPRESVPREGEGGAGRAAAERDMALVREHLHRIGDGLAGAAAPTPEPAPEPAPAGRRRARFRRRVLYGLAASVALALLGTGGAYLAAHHGGGGGQALLTDGGLVACSTAIAEGTIAGVEPAGGRHRFRIVLDVEQSYRPAAGKPRLVFTEEGAEVPAYYRKGARMLVVVSGTPGEPPLTFRAGDPAYDRESAHDGESTHDGTSEPPRDALEWGRRWVERALPEARGLECRVG
>NZ_CP050177.1|WP_167033045.1|5367899_5371205_-|S8-family-serine-peptidase
MTSESGSISGPRRVARIAAAAGLVAALIATGAAPAFSETGTDDPGATAAVKSDRASDKLGAADAQLLSQAEAEGTKNVTLMVATAPGATEQVADQLGDVAGATVGKTYDKIGYVRATLPTAKADAAIKAAAKLSSVHGIDLKQEIQLDDPTPAADTVAHAKGSKGSAAEKYPAPSSKTPAKNPYNPSFETGAVDFVKQHPKADGRGVTIGILDSGVDLGHPALQKTTTGERKIVDWVTATDPVSDGDGTWLRMNSAVTGPTFTASGRTWTAPAGSYKFIPFAERVTTGGDMAGDLNRDGDTTDAWGVLYDPANGTVRVDLNNDGNFTNDTALKPYKDGFQIGYFGTDNPATPIVERIPFVVEIRKDVVYNASGAKSDYVNIGVIEGEHGTHVAGITAANGLFGGKMNGAAPGAKLVSSRACTWSGGCTNIALTEGMADLVINRGVDIVNMSIGGLPPLNDANNARALLYTQLIDTYGVQLVISAGNDGPGTNTISDPAVADKVISVGASISKETWAANYGSGVTTKYGLLPFSARGPREDGGFTPTITAPGAAINTTQTWYPGGPVAEAGYTLPPGYSMLQGTSMASPQATGASALLISAAKQKHRTLTPADLRTALTSSADRIPGLQAHEQGAGLIDVVKAWKEIEHGATAHEYTVKAPVDTTLDDRLKTPGFGTGLYDRDGGLQAGKSRTYDVTITRTTGPKGAVEHRLDWKNDDGTFRLLGSDKIKLPLNQPVTVTVQARPTSAGVHSAILEADDRRTEGVDKQILATVVVSKELAKPTYAFQATSSVQRNSSKSYFLTVPAGAKTLEVALGGLAKDSQTRFISIHPYGVPVEDSSTIFCYPNYPNPTNTCRPDVRSYTDPTPGVWEIEVEARRTSPLLDNKYTLDVSLLGATFDPAVTTLPEAKIGTPTPVQWTVKNDFAALDGKLAGGPLGSAKIERPTIANLDQLVSTIVVGEGVDRLDVAIGNPSDLSADLDLTVAKDGVVVGQSADGDSEESVSLTKPAAGTYTVVVDGYSVPAGTTEFDYRDVYYSAALGSIKVDDSKPVKLASGASAQVTAEVVVNSAAPEGRQFFGDVSLLNARGTVAGGGSVQITKTTG

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Crispr_ID: NZ_CP050177_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_25

5473477-5473563

Orphan

Consensus_repeat	Method
GTCCTCAATCGCCGGACGGGCTGGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_25

>merge|NZ_CP050177|25|5473477-5473563|CRISPRCasFinder
GTCCTCAATCGCCGGACGGGCTGGATGTGGCGCGGGCCCGTTGACCGTGCGGGTCAAGGACGTCCTCAATCGCCGGACGGGCTTGAT

>NZ_CP050177|25|20|5473477-5473563|CRISPRCasFinder
GTCCTCAATCGCCGGACGGGCTGGAT	GTGGCGCGGGCCCGTTGACCGTGCGGGTCAAGGAC
GTCCTCAATCGCCGGACGGGCTTGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167033182.1\|5468525_5470415_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|223953
NZ_CP050177.1\|WP_167033205.1\|5482730_5483639_+\|ribonuclease-Z	unknown	unknown	gnl\|CDD\|234602
NZ_CP050177.1\|WP_167033184.1\|5470493_5471078_-\|response-regulator	unknown	unknown	gnl\|CDD\|381093
NZ_CP050177.1\|WP_167033188.1\|5475141_5476290_+\|beta-lactamase-family-protein	unknown	unknown	gnl\|CDD\|365903
NZ_CP050177.1\|WP_167033198.1\|5480451_5481528_+\|nitronate-monooxygenase	unknown	unknown	gnl\|CDD\|367316
NZ_CP050177.1\|WP_167033192.1\|5477205_5477943_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293840
NZ_CP050177.1\|WP_167033176.1\|5463518_5463764_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033200.1\|5481524_5482274_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|367950
NZ_CP050177.1\|WP_167033203.1\|5482365_5482725_+\|histidine-triad-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|238607
NZ_CP050177.1\|WP_167033178.1\|5464510_5465497_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|236130
NZ_CP050177.1\|WP_167033196.1\|5479137_5480274_+\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237654
NZ_CP050177.1\|WP_161312545.1\|5465882_5466149_-\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|376586
NZ_CP050177.1\|WP_167037486.1\|5471298_5473446_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP050177.1\|WP_167033180.1\|5466351_5468220_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP050177.1\|WP_167033186.1\|5473828_5475061_+\|coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|180172
NZ_CP050177.1\|WP_167033174.1\|5462572_5463469_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP050177.1\|WP_167033172.1\|5459707_5462248_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225212
NZ_CP050177.1\|WP_167033194.1\|5478120_5479137_+\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
NZ_CP050177.1\|WP_167033170.1\|5458784_5459711_+\|ComEA-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|224472
NZ_CP050177.1\|WP_167033190.1\|5476338_5477160_-\|DUF3097-domain-containing-protein	unknown	unknown	gnl\|CDD\|378628

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167033182.1\|5468525_5470415_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|223953	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism].	0
NZ_CP050177.1\|WP_167033205.1\|5482730_5483639_+\|ribonuclease-Z	gnl\|CDD\|234602	PRK00055, PRK00055, ribonuclease Z; Reviewed.	8.93419e-111
NZ_CP050177.1\|WP_167033184.1\|5470493_5471078_-\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.1942e-26
NZ_CP050177.1\|WP_167033198.1\|5480451_5481528_+\|nitronate-monooxygenase	gnl\|CDD\|367316	pfam03060, NMO, Nitronate monooxygenase. Nitronate monooxygenase (NMO), formerly referred to as 2-nitropropane dioxygenase (NPD) (EC:1.13.11.32), is an FMN-dependent enzyme that uses molecular oxygen to oxidize (anionic) alkyl nitronates and, in the case of the enzyme from Neurospora crassa, (neutral) nitroalkanes to the corresponding carbonyl compounds and nitrite. Previously classified as 2-nitropropane dioxygenase, but it is now recognized that this was the result of the slow ionization of nitroalkanes to their nitronate (anionic) forms. The enzymes from the fungus Neurospora crassa and the yeast Williopsis saturnus var. mrakii (formerly classified as Hansenula mrakii) contain non-covalently bound FMN as the cofactor. Active towards linear alkyl nitronates of lengths between 2 and 6 carbon atoms and, with lower activity, towards propyl-2-nitronate. The enzyme from N. crassa can also utilize neutral nitroalkanes, but with lower activity. One atom of oxygen is incorporated into the carbonyl group of the aldehyde product. The reaction appears to involve the formation of an enzyme-bound nitronate radical and an a-peroxynitroethane species, which then decomposes, either in the active site of the enzyme or after release, to acetaldehyde and nitrite.	7.84279e-109
NZ_CP050177.1\|WP_167033192.1\|5477205_5477943_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293840	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	4.76811e-45
NZ_CP050177.1\|WP_167033194.1\|5478120_5479137_+\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	5.69683e-158
NZ_CP050177.1\|WP_167033200.1\|5481524_5482274_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|367950	pfam04452, Methyltrans_RNA, RNA methyltransferase. RNA methyltransferases modify nucleotides during ribosomal RNA maturation in a site-specific manner. The Escherichia coli member is specific for U1498 methylation.	3.63315e-72
NZ_CP050177.1\|WP_167033203.1\|5482365_5482725_+\|histidine-triad-nucleotide-binding-protein	gnl\|CDD\|238607	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.	3.78608e-47
NZ_CP050177.1\|WP_167033178.1\|5464510_5465497_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|236130	PRK07914, PRK07914, hypothetical protein; Reviewed.	1.38244e-87
NZ_CP050177.1\|WP_167033196.1\|5479137_5480274_+\|molecular-chaperone-DnaJ	gnl\|CDD\|237654	PRK14278, PRK14278, chaperone protein DnaJ; Provisional.	0
NZ_CP050177.1\|WP_161312545.1\|5465882_5466149_-\|30S-ribosomal-protein-S20	gnl\|CDD\|376586	pfam01649, Ribosomal_S20p, Ribosomal protein S20. Bacterial ribosomal protein S20 interacts with 16S rRNA.	3.3272e-21
NZ_CP050177.1\|WP_167037486.1\|5471298_5473446_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	7.44787e-44
NZ_CP050177.1\|WP_167033180.1\|5466351_5468220_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP050177.1\|WP_167033174.1\|5462572_5463469_+\|hypothetical-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	2.55126e-47
NZ_CP050177.1\|WP_167033186.1\|5473828_5475061_+\|coproporphyrinogen-III-oxidase	gnl\|CDD\|180172	PRK05628, PRK05628, coproporphyrinogen III oxidase; Validated.	0
NZ_CP050177.1\|WP_167033188.1\|5475141_5476290_+\|beta-lactamase-family-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	6.54202e-54
NZ_CP050177.1\|WP_167033172.1\|5459707_5462248_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	1.74042e-45
NZ_CP050177.1\|WP_167033170.1\|5458784_5459711_+\|ComEA-family-DNA-binding-protein	gnl\|CDD\|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	8.82928e-28
NZ_CP050177.1\|WP_167033190.1\|5476338_5477160_-\|DUF3097-domain-containing-protein	gnl\|CDD\|378628	pfam11296, DUF3097, Protein of unknown function (DUF3097). This family of proteins with unknown function appears to be restricted to Actinobacteria.	2.82892e-163

>NZ_CP050177.1|WP_167037486.1|5471298_5473446_+|SpoIIE-family-protein-phosphatase
MPRATARRPAPQVPLRKDARSTSRTSLPGNPLAPAAARRFARAALADWTSLGLLATCIFCPGENGCSPGQHSTDLLADDAVLIVDELVTNAVVHAGTDVELLCRLEDPAQDPSASDDGPDEVGAALVLEVSDHHPARGVLSDGRGRAPAGTPEYGRGLELVAALAERWGITYRSGTKTVWARLPLDVRDGAGEAPGAPVTGSGGAGVSQASGDAREASVAPEAAGDSGTGVGVGAGGPAAEPVVRRELRAAEILTPAPRRAVRDDPDWVGRAALSFLAEASDLLAGQLDEDLVAALACQLLVPRLADWCAVWLDAEGGQAGAAPRLARVWHAEESRIEELRAVLEQESLRKELPRLPESLRGGPVPVSVPWRPAAEADASAFDADDGDGTDEGAALACRLVANGRPLGTLLLGGAGRTRVPDEVSALIEDFARRVALAIGAARRYTRQATISRVLQRGLLPSQVARIPGVESALVYEPSDEGLAGGDFYDVFPCPPGGRWCFMLGDVQGSGPEAAVVTGLARPWLRLLAREGYRVGAVLDRLNRLLLDDATEAAAAVAAAPEGGAVREENRPRFLSLLYGELVPLPLGGGARCTLASAGHPLPLLLRPDGTVTSAATPQLLLGVEENVSYQSRTFDLAPGDTLLCVTDGVTERRSGRRMLDDGDGLARALEQCVGLSAEGVAERIRRAVHDFDGAPPGDDVALLVFQAGGPPPTT
>NZ_CP050177.1|WP_167033184.1|5470493_5471078_-|response-regulator
MSRTAPAEDRASILLVDDMEDNLVALEAVLASLDEPLVRARSGEEALRALGRQQFAVILLDVRMPGMDGFETATAVKRLDHAKDIPIIFLNGSDSDGGYAFRGYATGAADFLTKPFDPWVLRAKVRVFLELHRGKRQLERLLAREQEQLGRIGDRLASIEKELAQGDPNDLAVLGHQLTRIEETLGELRREREQ
>NZ_CP050177.1|WP_167033182.1|5468525_5470415_+|long-chain-fatty-acid--CoA-ligase
MSDTQNLIENRPPSVAVLFVERVAATPDAEAYRYPVPPASGEGPDDWRSLTWSEAAERVYAVAAGLIELGVRPEERVALAAATSVDWILTDLGVMCAGAATTTVYPSTNAQECAYILADSGSRVLIAEDAVQLAKARERRAELPDLAHVVVIDPAGATPAEGDPDGWVLSLADLETRGRAYLARNPGAVKERLGAIRADQLATLIYTSGTTGRPKGVRLLHDNWSYMAKATVGTGLIRHDDVQYLWLPLAHVFGKVLTSGHIEAGHVTAVDGRVDKIIENLPVVRPTYMAAVPRIFEKVYNGVAAKARAGGGAKYKIFQWAAELARESAKISQDNFRRTGRASLPFALGAKHKVADALVYSKLREAFGGRLRAAISGSAALAPDIGFFFSGAGIHILEGYGLTESSAASFVNPGEAYRTGTVGKPLPGNEVRIADDGEILLRGPGIMSGYHGLPEKTAEVLEADGWFHTGDIGELSVDGYLRITDRKKDLIKTSGGKYIAPAEIEGQFKAVCPFVSNILVHGADRNFCTALIALDEPTILGWAAEHGMAGRSYEDVVASPAVVQLIDGYVQRLNEGLQRWQTVKKFRLLPRDLDIEHGELTPSLKLKRPVVEREYKDLLEEMYAGTKAV
>NZ_CP050177.1|WP_167033180.1|5466351_5468220_+|elongation-factor-4
MPATPTHVPEPSRTDPALLRNFCIIAHIDHGKSTLADRMLQLTGVVDSRQMRAQYLDRMDIERERGITIKSQAVRLPWAPRTGEDVGRTHVLNMIDTPGHVDFTYEVSRSLAACEGTVLLVDAAQGIEAQTLANLYLAMENDLTIVPVLNKIDLPAAQPEKFAEELANLIGCQPEDVLRVSAKTGVGVDALLDRVVRDVPAPVGDADAPARAMIFDSVYDSYRGVVTYVRVIDGSLNKRERIRMMSTNATHELLEIGVSSPEMTPADGIGVGEVGYIITGVKDVRQSKVGDTITTLNKGATEALGGYKDPKPMVFSGLYPLDGSDYPELRDALDKLQLNDAALVYEPETSAALGFGFRVGFLGLLHLDVIRERLEREFGLDLIATAPNVVYRVVMEDRKEHIVTNPSEFPDGKIDAVFEPVVKATILAPSEFIGSIMELCQARRGTLLGMDYLSEDRVEIRYTLPLAEIVFDFFDQLKSKTRGYASLDYEPTGEQSAQLVKVDILLHGDKVDAFSAITHKDAAYAYGVRLVATLRGLIPRQAFEIPIQAAIGSRVIARETIRAIRKDVLAKCYGGDISRKRKLLEKQKEGKKRMKMVGSVEVPQEAFISVLSSDESGGKAKK
>NZ_CP050177.1|WP_161312545.1|5465882_5466149_-|30S-ribosomal-protein-S20
MANIKSQIKRNKTNEKARLRNKSVKSALKTSIRKAREAAVEGDVEKATAAAREASRQLDKAASKGVIHKNAAANKKSALASKVAALQA
>NZ_CP050177.1|WP_167033178.1|5464510_5465497_+|DNA-polymerase-III-subunit-delta
MATRKASPDDLLAPLTLAVGQEDLLLDRAVQQVVAAARASDADTDVRDLTSDQLQPGTLAELTSPSLFAERKVVIVRNAQDLSADTIKDVKAYLDAPAEEITLVLLHAGGAKGKALLDAARKAGAREVACPKTTKPAERLSFVRSEFRVLGRSATPEACQALVDSIGSDLRELASAVSQLAADVEGTIDEEIVARYYTGRAEASSFTVADRAVEGRAAEALEALRWSLSTGVAPVLITSALAQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVAAALVAVAEADAGVKGGGDDPEYALEKAVVAIARAARAGR
>NZ_CP050177.1|WP_167033176.1|5463518_5463764_+|hypothetical-protein
MSDVRHVLVLPDRDAAEEVARELGERFAVTEEPQLVRDALAGEDDAEDAQWLVVVEDPGGRLDAAELDTFVADWDGWREAP
>NZ_CP050177.1|WP_167033174.1|5462572_5463469_+|hypothetical-protein
MISRLRGRRTAAHQKSNPLAGLTVPTGAGLLTCRVLDPVNEPVRQAEFTVSDGNGRKVVSGETDPFGTIVAMVPNGEYRLAVSADSFSSYRGSVSIAEDGQHAGLGDITLQIAPSLPLPTPGEWEIEPAHSRIGFIARHIGLARVHGRFDNFAGAIRIGETIEQSAMHVIIGAASIDTNVQMRDDHLRSADFLDVANYPTLEFYSDRFVHRGGNNWAITGALTLHGVTRTVTLDAQYLGIGNGMEGETRVAVRASTELHREDYTVSWQSMLARGIAVVGSSIKIDLDIQIIPKTQIQG
>NZ_CP050177.1|WP_167033172.1|5459707_5462248_+|MBL-fold-metallo-hydrolase
MTRSTSPPRPAVHVAAGNPLGASDPRQEGPTDLRLVPPALAAWGAAALALGAEGSWTAAGVLVCLLAAGLTLTGVAVRGTAARGALRWVGVGWGRLNGVALAAVLLCGAAGAAAAGLYGADLRRGPVPGLAERYARVTVEVIVTSDPRPTRPRVFGDRMSGGAFLLEAEVTRVTASDGAVTSARTPVLVLADPGAYAGRWRGVLPSTRLRLTGRLSPPPYGDDRYAAALRGGGAGPPRVIGEPSVPQRVAGALRAGLREATEGLPADARALLPGLVVGDTSRIPPDLHDAFKATDLSHLTAVSGSNLTIVLVLLIGPPGLALRAERRGLAPRLRISLRSTALLGGALTLAFVIVCRPDPSVLRAAACGCITLLAIGTGRRRSLIPALAGAVLFLVLYDPWLARSYGFLLSVLATGALLTLGPRWSATLRRRGVPPRLAEALAAAGAAQAMCAPVVAVFAARVSLVAIPCNLFAELAVAPATVLGFAALAAAPLAMPVAEVLARCAGWPAGWIASVARRGAALPGAEAGWPGGWWGGLLLAALTALVVLAARRVPRHPWTAAACAVLLLLVILRPPPLTRLVTGWPPPGWSFAMCDVGQGDSTVLAAGDGTAVVVDAGPDPLLADRCLRDLGITRVPLLLLTHLHADHVAGLPGVLRGRAVGAIQTTRLQEPADQGAFVRRTAAEAGVPVVRAGPGERRRVGPLSWQVLWPRADPVAGEPNDASVTLFVRVRGGPTLLLLGDLEPPAQRGLLRDHPALPPVDVLKVAHHGSPFQHPGLLRAVRPRLALISVGAENLYGHPSPRTVGALRAGGAAVLRTDTDGAIAVTGTGRGLRAVPRGARDGPGAG
>NZ_CP050177.1|WP_167033170.1|5458784_5459711_+|ComEA-family-DNA-binding-protein
MTLRTRSVTSSPTSGPGRAPGSDSRARHGRRLRARSRGGGSAAATTSAALRLRAEALFTDGPRGDGLSPPRLPSVSAAPDRPPTGRRRERVVLAVRERLPLWLQLRCGLEPRTLAALAVVLVVAGILAAQHFWAARPRSVQAPQTVVRAAAVVPRSSPPPGSGVGAAVPDRVVVDVGGKVRRPGVLRLPAGSRVADALRAAGGVEPGADTAALNRARVLTDGEQVVVGVPAPPAAEAPLGGPRPPEPVSLNTGTAEQLDTLPGVGPVLAQRILDHRDEHGGFRSVDELREVNGIGDRRFADLRPLVRP
>NZ_CP050177.1|WP_167033186.1|5473828_5475061_+|coproporphyrinogen-III-oxidase
MPSVLPDGDPMPDTGTLPTHALDAAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLIDEVRLARKVLGDDRRPVRTVFVGGGTPTLLAADDLVRMLAAVRDEFGLADDAEITTEANPDSVDPAYLAALREGGFNRISFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFEHVNLDLIYGTPGETDDDWRASLAAAVGAGPDHISAYALIVEEGTQLARRIRRGEVPMTDDDEHADRYLIADDVLAKAGFSWYEVSNWATTDAGRCLHNELYWRGADWWGAGPGAHSHVGGVRWWNVKHPGAYAAALAEGRSPGAGREILTAEDRRVERILLELRLSDGAPLDLLATAGLAAAARAVADGLLEPGPYDEGRAVLTLRGRLLADAVVRDLVD
>NZ_CP050177.1|WP_167033188.1|5475141_5476290_+|beta-lactamase-family-protein
MTTLHTLLRSHVDDGTVPGAVALVAKDGRVEVAAVGDVDTEGTAPMARDSIFRIASISKPVVAAAVLMLVDDGLIALGDPVRRWLPELAQPMVVRTPGAPVDDVVPAARPITVADLLSSRAGYGFAADFSLPAVGLLFSELKQGGPHPDAVAPPDAWTAALGRIPLLRQPGEAWLYNTCSDIQGVLVARVTERPLGEFLAERLFEPLGMTDTGFSVPPAALDRFTSFYRDDLTLADAPDGKWSTPPAFESGAGGLVSTADDWYAFARLLVDGGSVAGSGGGRRLLSAESVRLMTTDHLTPVQRAEGALFLEGQGWGYGGSVDVAAVDPWNVPGRYGWVGGTGTTAHVVPSTGAVSVLLTQRAMADPTPPALMREFWRYAATA
>NZ_CP050177.1|WP_167033190.1|5476338_5477160_-|DUF3097-domain-containing-protein
MRSYSPDLTPPWKKPTPAPEVPAEPDLVVEEVATGFCGAVIRCEKTAEGPTVTLEDRFGKHRVFPLAVRGFLLEGKVVTLVRPTAGGPVRPTRTASGSVAVPGARARVARAGRIYVEGRHDAELVERVWGDDLRIEGVVVEYLEGVDDLPAVVEEFGPAPDARLGVLVDHLVPGSKESRIAAAVTGADVLVVGHPYIDVWEAVKPSSVGIAAWPRVPRGEDWKTGVCRALGWPENTGAAWQHILSKVHSYRDLEPTLLGSVERLIDFVTEPAP
>NZ_CP050177.1|WP_167033192.1|5477205_5477943_-|MBL-fold-metallo-hydrolase
MDIRWEERGWERLSPRAGRRRLPGWDATAGLVAGDTGALLFDTGATPREGAALRADTGALLGPGRHVTRVALSHPHFDHVLGTAAFPEAEVYGAVGLAELLARGGGALYEDAVREGMDAAEAAGARDALVPPGHAVSGELALDLGGLQVLLANVGPGHTAHDLALLVPGADGAAPVLFCGDLVEESGEPQAGPDAIPGRWPAALDRLLALGGEDAVYVPGHGAVVDAAFVRAQRDALAVRFGVSR
>NZ_CP050177.1|WP_167033194.1|5478120_5479137_+|heat-inducible-transcriptional-repressor-HrcA
MLSERRLEVLRAIVQDYVGTEEPVGSKALTERHKLGVSPATVRNDMAVLEDEGFIAQPHTSAGRIPTDKGYRLFVDRLAGVKPLSSPERRAIQNFLDSAVDLDDVVGRTVRLLAQLTRQVAVVQYPSLTRSTVRHVELLGLSPARLMLVLITDTGRVEQRMIDCPAPFGETALADLRARLNSRVVGRRFSDVPQLVQDLPDSFEQEDRGVVTTVLATLLETLVEETEERLVIGGTANLTRFGHDFPLTIRPVLEALEEQVVLLKLLGEAEHPGMTVRIGHENAHEGLNSTSVVAVGYGSGDEAVAKLGVVGPTRMDYPGTMGAVRAVARYVGQILAES
>NZ_CP050177.1|WP_167033196.1|5479137_5480274_+|molecular-chaperone-DnaJ
MATDYYAVLGVRRDASQDEIKKAFRRLARELHPDVNPDPKTQERFKEINAAYEVLSDPQKKQVYDLGGDPLSASGGGGAGGFGAGGFGNFSDIMDAFFGTSQQRGPRSRTRRGQDAMIRLEIDLNESAFGTTKDIQVDTAVVCTTCSGEGAAPGTSAQTCDMCRGRGEVSQVTRSFLGQVMTSRPCPQCQGFGTVVPTPCPECAGDGRIRSRRTLTVKIPAGVDNGTRIQLAGEGEVGPGGGPAGDLYVEIHELPHAVFQRRGDDLHCTVTVPMTAASLGTKCPLETLDGVEDIDVRPGTQSGQSIPLHGRGITHLRGGGRGDLIVHVEVTTPSKLDAEQERLLRELAVLRGEERPLGQFQPGQQGLFSRLKDAFNGR
>NZ_CP050177.1|WP_167033198.1|5480451_5481528_+|nitronate-monooxygenase
MSSALTDLCRYPIVQAPMAGGASTPQLAAAVSDAGGLGFLAAGYKSVDVMYEEIKHLRGLTSRPFGVNLFMPQPQYADAGVVEVYRNQLAGEATWYETPLGDPESGRDDGYEAKLAILLDDPVPVVSFTFGCPTRTTLDAFAKVGTLTVVTVTTPEEAQTAQWSGADVVCVQGIEAGGHQGTHRDDPENDGVGLGLLSLLALVKETVDLPVIATGGIMRGGQIAAVLAAGAEAAQLGTAFLVCPESGASDLHKDAMTNPLFVRTQLTRAFSGRPARGLVNRFMSEHGKYAPAAYPEVHHLTSGLRKAAAKVGDAQGMALWAGQGHRLARDLPAATLVNVLVTEFETAVETLGRPGNAS
>NZ_CP050177.1|WP_167033200.1|5481524_5482274_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MTAPVFVVDGFDAGPAGRFVLDGPEGRHAVAVKRLHAGEDVVLTDGRGRWADAVVLGTEGKDRLIVQLDAYAEEPPGSPHITVVQALPKGDRGEVAVETMTETGVDAVVPWSASRCVTRWNGERGAKALAKWRSTARESGKQSRRVRFPEVADAMTTKQVAALLATADFAAVLHEDRDAASAALASADLPREGSVVLVVGPEGGVSPEELAAFAAVGAKPYRLGRSVLRTSTAGTAAVAVVMSRTGRWS
>NZ_CP050177.1|WP_167033203.1|5482365_5482725_+|histidine-triad-nucleotide-binding-protein
MAGEPQADCLFCKIVAGDVPATVVRETATTVAFRDIHPQAPTHVLVIPRVHYPDAASLAAAEPQVAADVLAEAGAVAAAEKADATGYRIVFNTGSGAGQTVFHAHAHLLGGRGLNWPPG
>NZ_CP050177.1|WP_167033205.1|5482730_5483639_+|ribonuclease-Z
MSVRELVVLGTASQVPTRHRNHNGYLLRWDGEGLLFDPGEGTQRQMLRAGVAAHDINRICVTHFHGDHALGLAGVIQRINLDRVPHPLTAHYPASGQHFFERLRYATAYRETVRLTEAPVTGDGVLARTAAYTLEAHVLSHPVESYGYRLTEPDGRRMLPERLAAHGIKGPDVGRLARDGVLGGVTLDEVSEIRTGQRFAFVMDTRLCDGVHTLAEGCDMLVIESTFLDEDETLATDHGHLTAGQAGRVARDAGVRHLVLTHFSQRYGDPEAFARQARAAGFTGELTVAADLVRVPLPRRGA

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Crispr_ID: NZ_CP050177_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_26

5697578-5697668

Orphan

Consensus_repeat	Method
TCAAGCCCGTCCGGCGTTTGAGGACATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_26

>merge|NZ_CP050177|26|5697578-5697668|CRISPRCasFinder
TCAAGCCCGTCCGGCGTTTGAGGACATCTTTGACCGCAACGGTCACGCCCGACCGCAACCCCCTCAAGCCCGTCCGGCGATTGAGGACATC

>NZ_CP050177|26|21|5697578-5697668|CRISPRCasFinder
TCAAGCCCGTCCGGCGTTTGAGGACATC	TTTGACCGCAACGGTCACGCCCGACCGCAACCCCC
TCAAGCCCGTCCGGCGATTGAGGACATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167033534.1\|5699679_5700426_+\|bifunctional-DNA-primase/polymerase	unknown	unknown	gnl\|CDD\|378140
NZ_CP050177.1\|WP_167033516.1\|5686955_5688062_-\|DUF1864-family-protein	unknown	unknown	gnl\|CDD\|255115
NZ_CP050177.1\|WP_167033540.1\|5701856_5702828_-\|FTR1-family-protein	unknown	unknown	gnl\|CDD\|251822
NZ_CP050177.1\|WP_167033514.1\|5684958_5686848_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|366133
NZ_CP050177.1\|WP_167033542.1\|5702856_5704212_-\|deferrochelatase/peroxidase-EfeB	unknown	unknown	gnl\|CDD\|273606
NZ_CP050177.1\|WP_167033526.1\|5691592_5693257_+\|alkaline-phosphatase	unknown	unknown	gnl\|CDD\|226070
NZ_CP050177.1\|WP_167033524.1\|5690703_5691594_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP050177.1\|WP_167033532.1\|5698866_5699490_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_CP050177.1\|WP_167033546.1\|5705676_5706375_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP050177.1\|WP_167037555.1\|5694537_5695878_+\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP050177.1\|WP_167033522.1\|5689655_5690546_-\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|334973
NZ_CP050177.1\|WP_167033538.1\|5700988_5701966_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033536.1\|5700564_5700897_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033544.1\|5704247_5705390_-\|EfeM/EfeO-family-lipoprotein	unknown	unknown	gnl\|CDD\|271139
NZ_CP050177.1\|WP_167033529.1\|5697709_5698741_+\|rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|286344
NZ_CP050177.1\|WP_167033528.1\|5693263_5694352_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP050177.1\|WP_167037558.1\|5695962_5697279_-\|glutaminyl-peptide-cyclotransferase	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033548.1\|5706508_5707198_-\|biliverdin-producing-heme-oxygenase	unknown	unknown	gnl\|CDD\|350856
NZ_CP050177.1\|WP_167033520.1\|5689017_5689662_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226765
NZ_CP050177.1\|WP_167033518.1\|5688376_5688823_+\|polyketide-cyclase	unknown	unknown	gnl\|CDD\|176874

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167033534.1\|5699679_5700426_+\|bifunctional-DNA-primase/polymerase	gnl\|CDD\|378140	pfam09250, Prim-Pol, Bifunctional DNA primase/polymerase, N-terminal. Members of this family adopt a structure consisting of a core of antiparallel beta sheets. They are found in various bacterial hypothetical proteins, and have been shown to harbour both primase and polymerase activities.	1.42104e-20
NZ_CP050177.1\|WP_167033516.1\|5686955_5688062_-\|DUF1864-family-protein	gnl\|CDD\|255115	pfam08933, DUF1864, Domain of unknown function (DUF1864). This domain has no known function. It is found in various hypothetical and conserved domain proteins.	1.73566e-33
NZ_CP050177.1\|WP_167033540.1\|5701856_5702828_-\|FTR1-family-protein	gnl\|CDD\|251822	pfam03239, FTR1, Iron permease FTR1 family.	1.46616e-68
NZ_CP050177.1\|WP_167033514.1\|5684958_5686848_+\|FHA-domain-containing-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	1.70404e-16
NZ_CP050177.1\|WP_167033526.1\|5691592_5693257_+\|alkaline-phosphatase	gnl\|CDD\|226070	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism].	2.9639e-142
NZ_CP050177.1\|WP_167033524.1\|5690703_5691594_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	8.97224e-63
NZ_CP050177.1\|WP_167033546.1\|5705676_5706375_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	1.10459e-17
NZ_CP050177.1\|WP_167037555.1\|5694537_5695878_+\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.19616e-106
NZ_CP050177.1\|WP_167033522.1\|5689655_5690546_-\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|334973	pfam02567, PhzC-PhzF, Phenazine biosynthesis-like protein. PhzC/PhzF is involved in dimerization of two 2,3-dihydro-3-oxo-anthranilic acid molecules to create PCA by P. fluorescens. This family also contains uncharacterized Mycobacterial proteins, though there is no significant sequence similarity to pfam00303 members. This family appears to be distantly related to pfam01678, including containing a weak internal duplication. However members of this family do not contain the conserved cysteines that are hypothesized to be active site residues (Bateman A pers obs).	1.0326e-66
NZ_CP050177.1\|WP_167033542.1\|5702856_5704212_-\|deferrochelatase/peroxidase-EfeB	gnl\|CDD\|273606	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme. This model represents a small family of proteins with a typical Tat (twin-arginine translocation) signal sequence, suggesting that the family is exported in a folded state, perhaps with a bound redox cofactor. Members of this family show homology to Dyp, a dye-decolorizing peroxidase from Geotrichum candidum that lacks any typical heme-binding site.	4.39148e-180
NZ_CP050177.1\|WP_167033544.1\|5704247_5705390_-\|EfeM/EfeO-family-lipoprotein	gnl\|CDD\|271139	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon. This family includes the EfeO domain, an essential component of the EfeUOB operon which is highly conserved in bacteria. However, its biochemical function is unknown. EfeO contains an N-terminal cupredoxin (CUP)-like domain and C-terminal imelysin-like domain that may bind iron. Algp7, a member of EfeO family protein from Sphingomonas sp. A1, is found to bind alginate at neutral pH, but does not contain the CUP domain, thus having a role that does not seem to be related to iron uptake. Some members of this family are fused to an N-terminal putative EfeU ion permease domain. The imelysin-like domain of this family also contains the GxHxxE sequence motif and a highly conserved functional site, suggesting a similar role to other imelysin family proteins containing the same motif.	2.21931e-90
NZ_CP050177.1\|WP_167033529.1\|5697709_5698741_+\|rRNA-methyltransferase	gnl\|CDD\|286344	pfam09243, Rsm22, Mitochondrial small ribosomal subunit Rsm22. Rsm22 has been identified as a mitochondrial small ribosomal subunit and is a methyltransferase. In Schizosaccharomyces pombe, Rsm22 is tandemly fused to Cox11 (a factor required for copper insertion into cytochrome oxidase) and the two proteins are proteolytically cleaved after import into the mitochondria.	1.53692e-117
NZ_CP050177.1\|WP_167033528.1\|5693263_5694352_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.49161e-54
NZ_CP050177.1\|WP_167033532.1\|5698866_5699490_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	3.32285e-22
NZ_CP050177.1\|WP_167033548.1\|5706508_5707198_-\|biliverdin-producing-heme-oxygenase	gnl\|CDD\|350856	cd19165, HemeO, heme oxygenase in eukaryotes and some bacteria. This subfamily contains heme oxygenase (HO, EC 1.14.14.18) found in eukaryotes as well as some proteobacteria, including cyanobacteria. Heme oxygenase (HO) catalyzes the rate limiting step in the degradation of heme to biliverdin in a multi-step reaction. HO is essential for recycling of iron from heme which is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. In vertebrates, HO plays a role in heme homeostasis and oxidative stress response, and cellular signaling in mammals that include isoforms HO-1, HO-2 and HO-3. HO-1 is ubiquitously expressed after induction while HO-2 expression is constitutive, mostly limited to certain organs, such as the brain, testes, and the vascular system. HO-3 is non-functional in humans, suggesting that the Hmox3 gene is a pseudogene derived from HO-2 transcripts. In higher plants and cyanobacteria, heme oxygenase is required for the synthesis of light-harvesting pigments, which contain tetrapyrrols derived from biliverdin. Candida albicans expresses a heme oxygenase that is required for the utilization of heme as a nutritional iron source, whereas Saccharomyces cerevisiae responds to iron deprivation by increasing Hmx1p transcription, which is controlled by the major iron-dependent transcription factor, Aft1p, and promotes both the re-utilization of heme iron and the regulation of heme-dependent transcription during periods of iron scarcity. In pathogenic bacteria, HO is part of a pathway for iron acquisition from host heme. In Leptospira interrogans, a pathogenic spirochete that causes leptospirosis, HO is required for iron utilization when hemoglobin is the sole iron source, thus making HO an interesting target for novel antimicrobial agents. HO shares tertiary structure similarity to methane monooxygenase (EC 1.14.13.25), ribonucleotide reductase (EC 1.17.4.1) and thiaminase II (EC 3.5.99.2), but shares little sequence homology.	5.8043e-84
NZ_CP050177.1\|WP_167033520.1\|5689017_5689662_+\|hypothetical-protein	gnl\|CDD\|226765	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown].	3.0774e-17
NZ_CP050177.1\|WP_167033518.1\|5688376_5688823_+\|polyketide-cyclase	gnl\|CDD\|176874	cd08865, SRPBCC_10, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	5.45818e-32

>NZ_CP050177.1|WP_167037558.1|5695962_5697279_-|glutaminyl-peptide-cyclotransferase
MSLLAGGIVVAFLVLLAVQRDSDHPQTDGVEAKSKSESKSTAPLTRLTTPPAYNTAHGWEITSASPAYALAGSGTATRLAHLESAGQNRFRLRTLDPATGARGWEGAATRALFAPGLPPRLLSVTGADSRAYFVTWSYGKLGATAPAPTDTIVSLDVYDAATGARRRVEVPWPAAPVVSAAGSRLLISDGKATGAVVDPATGEVSRVEPGALGRPKNCRACGRLTELRAVTERGVLVGGAAEFWVRGGWFSRTVAPAGTAPASGVLSSVAPGRILARWQGEKGGKDTATHETWAVHDMTTGKVLARTRCRTPALAPVDEPQPTLSPTGRYLIAGRLAFDLATGKGHCFEAADGTGPLTLTAVTDEGTAYGAALARSVTDALAGGGTPVAVDLTAATPEAVALAPNVRLPGGSTAGGMGLFPWTDARDRPHLTAYQHRP
>NZ_CP050177.1|WP_167037555.1|5694537_5695878_+|multidrug-effflux-MFS-transporter
MPGAAEGVAGGRAGNPTGSPTGTAVKVPAPRQAPDRSAGRRGEAAVPAARRAGILVTLVLGGLTALPPLSMDMYLPALPDVTGSLAAPAATVQITLTACLMGMALGQIVVGPMSDRWGRRRPLLLGMVVYVFATALCAVAPNVELLIGVRLLQGLAGSAGIVIARAVVRDLYDGDEMARFFSTLMLISGVAPIIAPVIGGQVLRLTEWRGIFVVLTVVGALLTFVVWKWLHETLPEERRHSGGVGEALRTMRGLLADRVFIGYTLAGGLAFAALFAYVAASPFVVQEIYGASPQMFSLLFGINSVGLIAVGQINGKLLVGRVNLDRVLAFGLTVILFAAVALLLMTTGVFGTVGLFPVAAGLFVLMSAMGLAMPNTNAQALMRTPHAAGSASALIGTSSFLIGAVASPLVGIGGEGTAAPMALVQVVSAVGAIGCFLGLVRPWQRR
>NZ_CP050177.1|WP_167033528.1|5693263_5694352_-|Gfo/Idh/MocA-family-oxidoreductase
MTAEAETGREAEHERPVPVRVPPVAADRPVRWGVLATGGIAERFVTEVGELPDAEIVAVGSRGEASAKEFAGRLGIPRAYGAWAGLVADEDVDIVYVATPHSAHRAAAGLALAAGKPVLCEKAFTLDAREAGELVALAGERGLFLMEAMWMYCNPVIRRLVELVRDGAIGEIRTVQADFGLEGPFPPEHRLRDPALGGGAVLDLGVYPVSFAHLLLGEPDRVQADALLSPEGADLNTGILLGWDAGATALLTCSVTADTPRTATVTGTKGRIEIPAGFFSPDRLVLRRSGAEPEEITEEGLTGAGGLWGMQYEAAEVMRCLRAGETESPLVPLAGTLAVMRTLDAVRDRIGVRFPEAAASAA
>NZ_CP050177.1|WP_167033526.1|5691592_5693257_+|alkaline-phosphatase
MTAAHRHAPELRAAAQHLTSLARTGSLPRRRVLSGASAATAAVLAFAVNLPVAGVAGAAELDAGRLTADPFTLGVASGDPRPDGVFLWTRLAPDPYVPDSGLPQERVAVSWEVARDAGFARIEARGEATAHPEFHHSVHVDVRGLDADRVYWFRFRTGPWISPAGRTRTAPASGALVNRLRFAAVSCQAYHDGYFTAFRHLADEDLDVVFHLGDYLYEYAVSATGGARDYTDRTLPAVFNRETVTLDDYRLRYALFKSDPDLIAAHAAHPFVVTWDDHETENNYAGAIPENAVSPEEFLLRRAASYRAYWENQPLAPLMAPTGPDVVLYRRLGYGRLAQFDVLDTRQYRSDQAYGDGWQVPGPKSEDPSRTLTGETQERWLLDGWKSSSATWNVVPQQVTFARRRTAPTAGYKLSMDSWDGYPASRQRLLDGAEAAGLANLMVLSGDVHTGHAYDIKKDWDDPDSRTLGTEIVATSVTSGKNGRDRPADWDTFMAANPHMKFYSGRRGYVTVELGLTRARADFRTVDVVTSPGGAVKTAASFVTEAGSPGLSPA
>NZ_CP050177.1|WP_167033524.1|5690703_5691594_-|SDR-family-oxidoreductase
MCPSPVGSPDDGPGRDGCDEIHEIHVPRLSVPQLRCGPMNAMREINSKHKIALVTGAGSGVGRAVSVALGRAGWSLVLAGRTASRLAGTEALTGSSTEVLAVPTDVTVPEEVDALFAAARERYGRLDLLFNNAGTSGPGGLPLDELPYSAWRKVVDTNLTGSFLCAQGAFRQMKAQDPRGGRIINNGSVSAHAPRPDSIAYTATKHGVTGLTKSLSLDGRPYGIACGQIDIGNAATDMTERMRSGVPQANGEVAVEPVMEVADVADMVVYMAGLPLSANVQFATVMATKMPLIGRG
>NZ_CP050177.1|WP_167033522.1|5689655_5690546_-|PhzF-family-phenazine-biosynthesis-protein
MPAPLRYTAFSTTPTGGNPAGVVLDATHLTDTDMLAIAGDLGYSETAFLTAPPEGLGEPGRAYTVRYFSPRAEVPFCGHATVATAIALADRVGPGEFVFATPAGTVPVTVTRTPGDGTTTGTTTATLTSVTPHVTPIPAPDVEEALAALRWPATDLDPALPPRIAFAGARHLVLAAATRARLADLSYDFDRLETFMRQRDLTTVQLVWRESADVFHVRNPFPVGGVVEDPATGAAAAAFGAYARELGIVPDTATLTLHQGADMGRPGVLTVELRAGDARVRVGGAGARIPSPPLPQ
>NZ_CP050177.1|WP_167033520.1|5689017_5689662_+|hypothetical-protein
MNHLQGKRKLSTSAGLGLAVAALAAFAAACGSGSSSSSPAPTPSAHSSARSAQSAVQAAGSGKGSGTGSGSGTAVSVDARSGSLGTYLTDSAGRTLYLFASDTGSRSTCDGACAAQWPPLTASGTAKAGSGVTGGKLNTIARSDGSRQVTYNGHPLYYFKGDSAAGQTNGEGLNGFGANWYVVSPTGDRIAPAASSSAPSSASSGAGGYGSAGY
>NZ_CP050177.1|WP_167033518.1|5688376_5688823_+|polyketide-cyclase
MAGQFEATTEINRPIEEVFAFLADGTNDPKFSPRVQQIVKSPEGATAVDTVFLSTVKDAGMTTKREFRISELEAPTRIRWTETSKNTVTATEGGYDLESLEGGRTRVRIYNALEGHGIGKLLVGVALSAARKDAPAFAQRIKKAVEES
>NZ_CP050177.1|WP_167033516.1|5686955_5688062_-|DUF1864-family-protein
MSHPTGVDLGSPIRTATVRELDPLAADPALSALREQNARADVPALAAALRGLVPALDAVGAYSAERCAAAMRDLGLFLGSIKRHGPEPLSLVPELRPVLLELGRRTDLVPRDTVHHYCTWNPVGERQRMYTGDAQEARLQESVRLVFPHLRAGIELAATLSDTAPDDAQFRRSAEELTAHVERIVTAIDLVVAHVTPEFFALGLRPYFEEITVGDRVLMGPAAAQVPLWLIDQALWASDHSEPAYAEFVRDSVPYALPRWRDLYARWSRVPSVVSRLVEAFGDNPDDAARRMPALRANSEALARLLRVIVVFRGRHLALARKAYDADLRRYPVGSGGGSTDLLRQILDLTRTAARLTTRPADSGAGRT
>NZ_CP050177.1|WP_167033514.1|5684958_5686848_+|FHA-domain-containing-protein
MPPEIVGREGALAGRRIPVGDEPITFGRKGDNSVVITGGSASRFHAEVVREADGYVLHDRGSSNGTLVNGKRVTSHVLRPGDLIKIGDETFCFEVADAMETIMDLSLIESLMASTPAVEPGPVLKVTIAGGGPVGLSLALLLEHLLGPQVAITVYDGRWVREDERIVWKNQGQGNVRRQQVVTVQSRQYLNLPEEIQARLFTPEAYSEMWPAGPDSIRGFNPRNIRIAHVEDKLLEIANEKSGSITLVPERFDPTERHDTLVKDHVLAICEGGRSRTRDHFTSKFGNADTSIYSLDGHHVQDVVLGLRVKSDLTDPMTVLLTVAQNRFLLNALRGEGFLNMRLTDEEAKEVVGIDPVRHVFEDCIASRPCVMGRDEDGDFHCSTHGTLFLPALVRGSALWKRVIEGLALFGISEGNLSAVTAFRLDMVQRPRFTAHLYSATSATPGTYGFLLGDAANAIHFWPGRGLNSGLASAISLARSLKNSWRGRPFRDADFVRHEAAMSMLQYRHKSRAWKAMVTTDEDGVTAAIKDKIARSIAAAEAADDLDKEADIEALMVQLRAIRDRLAPRIPGMPDDTVLRDHLGTMRSETLRTLLESGAWDTMIVGGEEVDIDIFYREDSPVAAKKTLP
>NZ_CP050177.1|WP_167033529.1|5697709_5698741_+|rRNA-methyltransferase
MNAETLSTTDALRKTLAGLLDGLPPKQAAQAVERLIANYRGTTPTGTPLLRDRSDVAAYAAYRMPATFEAVRAALGALADAAPGWAPAGHLDVGGGTGAAVWAADATWAEPRTTTVLDWAEPALALGRELAERSGLPGLRTVDWRRARIGTPLALPDTDLITVSYVLNELTERDRDALVDDVARAGQAVVIVEPGTPDGYLRVIEARRRLIGAGMRVAAPCPHDGACPIEPGTDWCHFAARVARSSLHRQVKGGSLPYEDEKFSYVAAVRFVPHPVRDRVIRKPQIRKGQVLLELCSSSEGLRGETVTKRHGGLYRAARDTAWGDAWPPPGPGADDAGEPDDA
>NZ_CP050177.1|WP_167033532.1|5698866_5699490_+|TetR/AcrR-family-transcriptional-regulator
MADSRAPDPTRRSERSRRAIYAAALALVTEVGYARTTVEAIAARAGVGKQTIYRWWPSKGAVLLEAFLDLADQAARAADGGAGLHGIPDTGDLAADLRLVLRATVDEMNDPAFDLPSRALAAEGIVDAELGAEFARKLLEPQLQLYVKRLRAGQEAGDVRRDIDVRVALELLVGPLAHRWLMRTLPLTHAYADAVADLALYGLAPRP
>NZ_CP050177.1|WP_167033534.1|5699679_5700426_+|bifunctional-DNA-primase/polymerase
MGDDFGRYRGTESRIPQWLRRRAKKSAEALDGAAADREALLLAVADAGMPVSPAAHPVGYRCSCERIGCPTPARHPISFAWQTQSTTDRPQIERWARNQPQANFITATGMIHDVLDVPLEAGSRALERLLERSVDVGPVADSGGDRMLFFTATRGTPEDEDEWWPCELDCHPETMDEHPGLRWHCRGSYVLVPPARLPGDLAVRWLRGPEHPLPDPLTLLETLTDACARYAGENGELDPHAVAWPLGR
>NZ_CP050177.1|WP_167033536.1|5700564_5700897_+|hypothetical-protein
MTKLWKGALVTGAAGIALVGGAGLATASPAAAAERNVLQCSAWVADDLAIGDCYNPGTQLHAFSVRAICGWAPDAYSNWIYVKPGTSASVGVRCGPLSTGVGGVAIEYGG
>NZ_CP050177.1|WP_167033538.1|5700988_5701966_-|hypothetical-protein
MRAVVGLAAVTSLSLTASGCVTVHGELAVVPTAQRSEAARALKVFTDAYNAADRAYDPELDAGQVTGALGAINQAGLRSRSVTDPDGNPRHVPLELTDAKFTIPKKAGWPRFFLADTDSNRDVDNGPQDNRWLLVFVRNGPDRAWEVAYLTIIATGAVPVFKTDGDGWGEAIRPDDKALAVAPNVLSDEYTSYLKTGEPAHFAPGPHTDGWRTERQKVARVPGFTQQYVDQPLKDGDFAPLGLATKDGGALVFFASRFFDRQTAAKGLRPRVSADVQALMTTTVTNTLTKEWMSNQAVTVPRTGSGAAQVDVIGRLQGVTGAVGS
>NZ_CP050177.1|WP_167033540.1|5701856_5702828_-|FTR1-family-protein
MFGNYLIGLREGLEASLVVCILVAYLVKTGRRDALRPIWIGISVAVVLALAFGFGLEYGAQELTFEAQETLGGSLSILAVCLVTWMVFWMRRTARHLKADLGAKLDAALAMGTGALVATAFLAVGREGLETALFVWASVRASQDGTYEPLIGVLLGLGTAVVLGWLFYRGALRINLAKFFTWTGGMLVVVAAGVLAYGVHDLQEADHIGGLSDKAFDISSTIPPDSWYGTLLKGVFNFQPDPTVVQLVVWLVYLIPTLALFLAPVWFGRSVGGGAGAEEQKATDDEADAGSGGAGGGHVAVTDGERVRDGARGAGGRTDGAAQ
>NZ_CP050177.1|WP_167033542.1|5702856_5704212_-|deferrochelatase/peroxidase-EfeB
MHRAGDGHAVDDQTTEGSPEATEGAGPGTAAGAGSATDAADSGAAPSRRALLGWGGAGLALGAVAAGGTVAAVRGGDRIEPAAESGAAVPFHGTHQAGIATAVQDRLHFASFDVTTKDRAELVQLLKDWTRAAERMTAGRTIGEGAYGGVAEAPPDDTGEALGLKPSRLSLTVGFGPSLFAENRFGLADRRPDALVDLPGFPGDNLDPARTGGDLCVQACADDPQVAVHAIRNLARIGFGKVAVRWSQLGFGKTSSTTPGAQTPRNLFGFKDGTENIDGADPAALDRHVWVSAKDGAGWLAGGSYLVARRISMRIESWDRTSLQEQEDIFGRDKGEGAPVGKAHEHDKPNLKAMLPTAHVRLAHPDAHHGVRMLRRGYSFTDGTDGLGRLDAGLFFLAYQRDVRDAFIPVQQSLARSDALNEYIQHVGSAVFAVPPGVRDTGDWWGRALVS
>NZ_CP050177.1|WP_167033544.1|5704247_5705390_-|EfeM/EfeO-family-lipoprotein
MRPARLSVVSAIAAVAALTAVTGCTEKSDSKAAAGAVRVTADDTSCDVSKKEFPSGHVELAVENKGSKVTEVYLLFPDDRIVTERENIGPGTKATLTAEVKSGSYEIACKPGMKGDGIRQKVTVTGGTAAARSPEKDAAVAAYRKYAQEQADATLPKVKVFTDAVRAGDIEGAKKAYAPSRVGWERTEPVAESFGDIDPLVDTRADGLEKGQKWTGWHRLEKELWQDKKLSPDAPGLADELDKDLADWQKRVGTAVITPTSMANGAKELLDEVAAGKITGEEDRYSHTDLVDFKANVEGAQQSYELLKPVAVKNDAALVTELGKQFAALNTLLDKYRAGGAGSGEFVSYDTVREPQRKELSDAVNALAEPLSRLAAAVVK
>NZ_CP050177.1|WP_167033546.1|5705676_5706375_+|PhzF-family-phenazine-biosynthesis-protein
MSCSKERGPGCLNARVNDIDVLSVFCAADGRHGNTLGVVREGRRHPRRADRQAIAAELGYSETVFVDDPERGVVDIYTPGLRLPFAGHPLVGTAWLLDLESVNPPAGEVWVRQDGEFTWITARPEWAPPRILRQYGSVAEVDALPAPPPGEGWLYAWAWQDEAAGRVRARAFPRRDDGIAEDEATGAAALLLTEQLGRALNITQGRGSQILTAPAPRGEIEIGGRVRLHRTH
>NZ_CP050177.1|WP_167033548.1|5706508_5707198_-|biliverdin-producing-heme-oxygenase
MDAHAVTVGTPPTPPTPFSTLIRVASHEQHTQAETSPFMGDLLGGRLGVDAYTRYTQQLWFVYRALEGASEALADDPVAGPFVRRELARTPELERDLAHLCGTGWRTGLEPLPATAAYAARVEECARVWPGGYVAHHYTRYLGDLSGGQIIRDRAEKAWGFARKGDGVRFYVFEGIPNPAAFKREYRELLDAVAADDLEKQRIVDECKRAFDFNGAVFRELGERFPRSA

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Crispr_ID: NZ_CP050177_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_27

5728935-5729029

Orphan

Consensus_repeat	Method
CAGCCCGTCCGGCGTTTGAGGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_27

>merge|NZ_CP050177|27|5728935-5729029|CRISPRCasFinder
CAGCCCGTCCGGCGTTTGAGGACGGACCGCAACCCGGTCGGAGCCGAGCATGACCAGCACCCCAGCCGCCCCCAGCCCGTCCGGCGCTTGAGGAC

>NZ_CP050177|27|22|5728935-5729029|CRISPRCasFinder
CAGCCCGTCCGGCGTTTGAGGAC	GGACCGCAACCCGGTCGGAGCCGAGCATGACCAGCACCCCAGCCGCCCC
CAGCCCGTCCGGCGCTTGAGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167033556.1\|5711807_5711990_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033558.1\|5712054_5712855_-\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100079
NZ_CP050177.1\|WP_167033560.1\|5719425_5720325_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|366444
NZ_CP050177.1\|WP_167033573.1\|5727424_5728642_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|182234
NZ_CP050177.1\|WP_167033568.1\|5725282_5725900_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_CP050177.1\|WP_167033579.1\|5733854_5734265_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033571.1\|5726232_5727276_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197318
NZ_CP050177.1\|WP_167033577.1\|5733041_5733689_-\|DUF3105-domain-containing-protein	unknown	unknown	gnl\|CDD\|378632
NZ_CP050177.1\|WP_167037567.1\|5729183_5730923_-\|NAD+-synthase	unknown	unknown	gnl\|CDD\|237577
NZ_CP050177.1\|WP_167033583.1\|5735298_5736660_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP050177.1\|WP_167033581.1\|5734388_5735069_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP050177.1\|WP_167033562.1\|5720321_5721371_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|130256
NZ_CP050177.1\|WP_167033575.1\|5731597_5732017_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341390
NZ_CP050177.1\|WP_167033564.1\|5721564_5722485_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NZ_CP050177.1\|WP_167033554.1\|5710931_5711642_+\|NADPH-dependent-F420-reductase	unknown	unknown	gnl\|CDD\|273873
NZ_CP050177.1\|WP_167037570.1\|5732364_5733021_-\|DUF305-domain-containing-protein	unknown	unknown	gnl\|CDD\|367619
NZ_CP050177.1\|WP_167033588.1\|5737414_5738272_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP050177.1\|WP_167033585.1\|5736806_5736950_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033566.1\|5722648_5724259_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|184957
NZ_CP050177.1\|WP_167033590.1\|5738343_5738865_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|334450

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167033558.1\|5712054_5712855_-\|site-2-protease-family-protein	gnl\|CDD\|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	3.05324e-44
NZ_CP050177.1\|WP_167033560.1\|5719425_5720325_-\|ABC-transporter-permease	gnl\|CDD\|366444	pfam01061, ABC2_membrane, ABC-2 type transporter.	9.05581e-22
NZ_CP050177.1\|WP_167033573.1\|5727424_5728642_+\|MFS-transporter	gnl\|CDD\|182234	PRK10091, PRK10091, MFS transport protein AraJ; Provisional.	1.09223e-91
NZ_CP050177.1\|WP_167033568.1\|5725282_5725900_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	4.17999e-16
NZ_CP050177.1\|WP_167033571.1\|5726232_5727276_+\|hypothetical-protein	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	1.7177e-22
NZ_CP050177.1\|WP_167033577.1\|5733041_5733689_-\|DUF3105-domain-containing-protein	gnl\|CDD\|378632	pfam11303, DUF3105, Protein of unknown function (DUF3105). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	9.82016e-61
NZ_CP050177.1\|WP_167037567.1\|5729183_5730923_-\|NAD+-synthase	gnl\|CDD\|237577	PRK13981, PRK13981, NAD synthetase; Provisional.	0
NZ_CP050177.1\|WP_167033583.1\|5735298_5736660_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	0
NZ_CP050177.1\|WP_167033581.1\|5734388_5735069_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	1.01184e-22
NZ_CP050177.1\|WP_167033562.1\|5720321_5721371_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|130256	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	1.20912e-135
NZ_CP050177.1\|WP_167033575.1\|5731597_5732017_-\|CBS-domain-containing-protein	gnl\|CDD\|341390	cd04622, CBS_pair_HRP1_like, CBS pair domain found in Hypoxic Response Protein 1 (HRP1) -like proteinds. Mycobacterium tuberculosis adapts to cellular stresses by upregulation of the dormancy survival regulon. Hypoxic response protein 1 (HRP1) is encoded by one of the most strongly upregulated genes in the dormancy survival regulon. HRP1 is a 'CBS-domain-only protein; however unlike other CBS containing proteins it does not appear to bind AMP. The biological function of the protein remains unclear, but is thought to contribute to the modulation of the host immune response. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	3.26941e-45
NZ_CP050177.1\|WP_167033564.1\|5721564_5722485_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	2.96778e-160
NZ_CP050177.1\|WP_167033554.1\|5710931_5711642_+\|NADPH-dependent-F420-reductase	gnl\|CDD\|273873	TIGR01915, F420-dependent_NADP_reductase, NADPH-dependent F420 reductase. This model represents a subset of a parent family described by pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. [Energy metabolism, Electron transport].	8.71145e-78
NZ_CP050177.1\|WP_167037570.1\|5732364_5733021_-\|DUF305-domain-containing-protein	gnl\|CDD\|367619	pfam03713, DUF305, Domain of unknown function (DUF305). Domain found in small family of bacterial secreted proteins with no known function. Also found in Paramecium bursaria chlorella virus 1. This domain is short and found in one or two copies. The domain has a conserved HH motif that may be functionally important. This domain belongs to the ferritin superfamily. It contains two sequence similar repeats each of which is composed of two alpha helices.	2.47889e-41
NZ_CP050177.1\|WP_167033588.1\|5737414_5738272_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	9.34549e-08
NZ_CP050177.1\|WP_167033566.1\|5722648_5724259_+\|MFS-transporter	gnl\|CDD\|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	3.09082e-78
NZ_CP050177.1\|WP_167033590.1\|5738343_5738865_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|334450	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase. Family of domains with putative PNPOx function. Family members were predicted to encode pyridoxamine 5'-phosphate oxidase, based on sequence similarity. However, there is no experimental data to validate the predicted activity and purified proteins, such as yeast YLR456W and its paralogs, do not possess this activity, nor do they bind to flavin mononucleotide (FMN). To date, the only time functional oxidase activity has been experimentally demonstrated is when the sequences contain both pfam01243 and pfam10590. Moreover, some of the family members that contain both domains have been shown to be involved in phenazine biosynthesis. While some molecular function has been experimentally validated for the proteins containing both domains, the role performed by each domain on its own is unknown.	6.47434e-13

>NZ_CP050177.1|WP_167033573.1|5727424_5728642_+|MFS-transporter
MPLALLALAVSAFGIGTTEFVMMGLLPNVADDLGTSVPTAGYLVSAYAIGVVLGAPLLTAVGSRIPRKRMLLLLMGFFVVGNLASALAPGFGWLLAGRLLAGLPHGAFFGVGAVVASRLVEEGRQARAVATMFLGLTVANIVGVPAATLLGQHLGWRATFLVVTVIGLVALAALARLVPYVPLDAHQSLGRELRALGNRQVLLGLATAVFGFAGVFAVYSYLASMTTEVMGFGESSVTVVLALFGIGMTLGALAAGPLTDRALRPTLYLSLATLAVVLVAFRFTAHVRWAALVTVVVLGAVGFLTTTPLQMLVMRKAKDAPTLASASNHSAFNLANAGGAWLGGAAIAAGWGWMSPALVGAVLAVVGLLIALVAGRMDASGAARGPRSRLVAKGTPHPREPASTH
>NZ_CP050177.1|WP_167033571.1|5726232_5727276_+|hypothetical-protein
MTQEYTAESVETGADAEHQRAGAGARVRTVLSRWRGGRNIWRRGIVLAVLAFLVALLMILHAQIPNRIGNLGSLTETFLPWLGLAVPVILVLALLRRSATALVALLLPAVVWVNLFGGLLADKSAGGGNFTVATHNVNADNPDPTGTAHEVAKSGADVLALEELTETDVPTYVKALAATYKYHSVQGTVGLWSKYPMSGTRPVDIRLGWVRAMRSTITTPMGRVGVIVAHLPSVRVKLHAGFTANQRDNSADALGEAISREPVGQVILLGDLNGTMNDRSLNAVTSQMRSTQGAAGHGYGFSWPASFPMARIDQIMVRNIEPTASWTLPRTDSDHLPIAARVELKAD
>NZ_CP050177.1|WP_167033568.1|5725282_5725900_+|TetR/AcrR-family-transcriptional-regulator
MRDQEYGQGGEHRRGRPRSEAVERAILEAVVALLEDGVPLGTLSIERIARTAGVGKATIYRRWQGKEALFVDVLREIEPPEPTLPGKSPLADLTVLLESLRTRGLAQRSSAFLHSVFAEMKSRPTLWAEYQRTVIEPRRQAMLAVLRRAVAEGELRDDLPVDLMYDLLVGAMLVRTLHRPDAPLPEDLAEQIVGAALEGLGARKA
>NZ_CP050177.1|WP_167033566.1|5722648_5724259_+|MFS-transporter
MSTPSGGPPAAASRVPEAVHRRRWAILGVLMFSLLIVVLDNSILNVAVKTIAAPAPEGIGATQSQLEWAINSYTLVFAGLLFTAGLLGDRIGRKKVLLFGIAVFGAGSALAAMSGSPAELIGYRALMGFGAAFVMPATLAVLMNVFERDEQPKAIGIWAGSVGLGIAIGPITGGLLLEHFWWGSIFLVNVPVAAVALVAMVLLVPDSRDPRPGRLDPVGVLLSIVGLVLLVYGIIRGGELADFTKVSVLAPLLGGVAVLAGFVWHEKRSSHPAIDVTYFKKPAFAAAVAAIALVFFALMGVTFFSAFYLQSVRGYTALQSGLLIVPLAAAQMIFAPRARLVVDRFGARAVCTVGMVLVAAGLAAFALFTAGTPVWVLCVDYFVLGTGMAHIMPPVTVAIMQALPREKAGSGSAINNTFRQVGGALGVAVLGSVLSASYRGDIESHLGALPAGARDAAGESIEATLTVAGKLGPAGAPLVESAHDAFLHAMHLTALGSAAVALIGVAVVALFLPGRTPAAKAPQEDRPATREPAARG
>NZ_CP050177.1|WP_167033564.1|5721564_5722485_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MTAQAAHDQQEQQNKQSQQNQQESPAGRPAGTPPSLYGGKSSRRVTVHDLAAAKERGERWPMLTAYDAMTASVFDEAGIPVMLVGDSMGNVHLGYETTVPVTLDEMTMLSAAVVRGTKRALVVADLPFGSYQEGPVQALRSATRLVKDAGVGAVKLEGGERSHGQIELLVQAGIPVMGHIGLTPQSVNTLGYRVQGRGEEAAQQMLRDAKAVQDAGAFAVVLELVPAELAAEVTRILHIPTIGIGAGIETDAQVLVYTDMVGLTGGKVPRFTKQYTNLRQTLGDAAKAFADEVVAGTFPQEEHTFH
>NZ_CP050177.1|WP_167033562.1|5720321_5721371_-|ATP-binding-cassette-domain-containing-protein
MTRIDKNPNGGRTGNAVEVRGLVKHYGDTKALDGIDLDVREGTVLGVLGPNGAGKTTLVRILSTLVQPDAGTAMVAGYDVLRQPRQLRRTIGLTGQYASVDEKLSGWENLYMIGRLLDLSRADARRRADELLERFSLTEAAKRPAMQYSGGMRRRLDLAASMIGHPAVLYLDEPTTGLDPRTRNEVWEEVQRMVAEGATVLLTTQYMEEAEQLANELTVIDRGRIIASGGVDELKARVGGRTLQIRPADPAQLASMAQALTDSGLVGLAGAQADAAEGLVHVAILSDEQLTAVIGLLGERGFGIANIGTHLPSLDEVFLAITGQKTSPSDATTTGATAGSDTTPEEVAA
>NZ_CP050177.1|WP_167033560.1|5719425_5720325_-|ABC-transporter-permease
MSTTTLPTSTPGTPAGEPGDRSPRAASAGGRTGTASVDDARIGLRANLRHIGALVRRNALQIKQDPESMFDVLLMPIIFTLLFVYVFGGSVGASLGGSRDEYVNYVVPGLMAMMGMNIAMAVGTGVNDDFRKGVMDRFRTMPIARSSVLIAKIVVEMGRMLVATAILLGMGFLLGLEIKSSVFHLFAAIGLSTVFGASLMWIFILLGLTMKTAQAVQGAAMLVLMPLQFGSSIFAPPSTMPGWLQSFTDYNPLSNLADAARSLINDQPVGHSVWLTLAWSAGITLISMPLAVARFRKKS
>NZ_CP050177.1|WP_167033558.1|5712054_5712855_-|site-2-protease-family-protein
MTTAATRSSDRRISPVFLGIAAVMAVSGWAVWTDFSANPGVAVFLFVTAAWIVSLCLHEYAHARTALHSGDISIGGKGYLTLNPLKYTHALLSIVLPVLFVIMGGIGLPGGAVFIERNRIQGRWKHSLISAAGPLTNVLFALACTAPFWLHALDGVPATFVYALGFLALLQITAAILNFLPVPGLDGYGVIEPWLSYKIRRQVEPFGQFGLLAVFAVLFIPSVNAGFFDLVDTVLSGLGIPSDTNITAWGQNLYRFWTDQSPFCQP
>NZ_CP050177.1|WP_167033556.1|5711807_5711990_+|hypothetical-protein
MPRLAVYALAVCALSVVAAVVSFVQGSFLGVVWLLLAGLSSNMAWYYLRRAKAQRAADGA
>NZ_CP050177.1|WP_167033554.1|5710931_5711642_+|NADPH-dependent-F420-reductase
MTSSDSGSAPKPPAKDPWDLPDVSGLVVGVLGGTGDQGRGLAYRLGRAGQKVIIGSRAADRASAAAAELGHGVEGADNAECARRSDVVIVAVPWDGHAAILTSLREELAGKLVVDCVNPLGFDKKGAYALTPEEGSAAEQAAALLPDSRVTAAFHHLSAPLLQDPAVEEIETDVMVLGEVRADTDIVQALAARIPGIRGVFAGRLRNAHQVESLVANLISVNRRYKAHAGLRVTDV
>NZ_CP050177.1|WP_167037567.1|5729183_5730923_-|NAD+-synthase
MNQIDSTVGDLAANAEAIVHWTRHAVEQGAHVVAFPEMVLTGYPVEDLALRSSFVEASRDALRALAGRLDAEGFGDRPVIVGYLDRSEKAQPRYGQPAGAPQNAGAVLYGGEVALTFAKHHLPNYGVFDEFRYFVPGDTLPVVRVHGIDIALAICEDLWQDGGRVPATCSAGAGLLISINASPYEKEKDDTRLDLVRKRAQEAGCTTAYVAMIGGQDELVFDGDSIVVDKDGEVVARAPQFAEGCVVLDLDLPAAPAAPPSGVVDDGLVIDHVVLSEEPLPAYERELSGGYAERLEDDEEIYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAAIACDAVGAENVYGISMPSKYSSDHSKDDAAELARRTGLNLRTVVIEPMFDAYMDALGLTGLAEENLQSRLRGTTLMAVSNQEGQIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTTIFRLARWRNRAAEERGQVPPIPENSISKPPSAELRPGQVDTDSLPDYDVLDRILELYVDRDTGKDAIVAAGFEEELVTRTLRMVDVAEYKRRQYPPGTKISAKGFGKDRRLPITNRWREAPSG
>NZ_CP050177.1|WP_167033575.1|5731597_5732017_-|CBS-domain-containing-protein
MTTAKDIMHPGAQWIPAHETLDRAAQLMREMEVGSLLIADQDERLAGILTDRDIVVGCVAMGHDPSKITAGDLAQGTPRWIDSDADVGEVLQEMQSHQIRRLPVIQDKRLVGMISEADLARHLTESQMGAWVEQVYARG
>NZ_CP050177.1|WP_167037570.1|5732364_5733021_-|DUF305-domain-containing-protein
MNRTQWAAIAAVVLALLFAGAATVASAGRDDGTGAPRTPSAGSPDAGFARDMALHHQQAVEMSFIVRDNTDDEDVRRLAYDIANTQANQRGMLLGWLDMWKLPKVESGIEPMAWMPMDMRMGAGHAMFEPHDGALMEGMATTTELDRLRAARGKAAEVLYLQLMTDHHKGGVMMAQGCVDLCAAGTERDLAQGMVTAQGSEIRLMADLLRERGAKPRG
>NZ_CP050177.1|WP_167033577.1|5733041_5733689_-|DUF3105-domain-containing-protein
MASKSQSAERKARIESMRRAEQAHERRSRIITITVSAVVVAGLVGFGAVILNKESDQKEQEQAAAKEPVKGEKSWDAKKLTRNHVTTAVKYPMKPPVGGDHNQVWMNCDRDVYKDPIPDMNAVHSLEHGAVWVTYNDKASEADVKALSDKVEKTSYTLMSPYKDQAGTIMLSAWGKQLTVDKASDPRVDQFLTKYVQGAQTPEPGAACTGGMGAQ
>NZ_CP050177.1|WP_167033579.1|5733854_5734265_-|hypothetical-protein
MGGARRTRITRPMALLSAMATLFAALFVCLGVDKVGEGADGESARGPAGVGHHRAAAPFTPVNKPVARYSCPYDGNDCGYFPHLSPAVLTVPPPAAPLASGVPHPRVEPTAPDGRLPRPGARARAPDLHVLQVLRT
>NZ_CP050177.1|WP_167033581.1|5734388_5735069_+|winged-helix-turn-helix-transcriptional-regulator
MADPADPPRRAGHPPNPPATPNPPATPNPPATPNPPHPGTPAPDQAGSVQSDESATDPAPGDVDAVTHAVLAASRVLVGISVRALEVVPDRVTLPQYRLLVVLDTHGDAKLVEVAERLGVNPSTAMRMLDRLIAAGLAARRSNPASRRETLLRLTPDGRRLVDEVSAARRREITTIVERLPPEQRAHLVTALTAFTEAGGEPADPVGDAEPYPLGWSDTHTRPGDA
>NZ_CP050177.1|WP_167033583.1|5735298_5736660_+|glutamine-synthetase
MDKQQEFVLRTLEERDIRFVRLWFTDVLGFLKSVAVAPAELEQAFDEGMGFDGSAIEGFARVYESDMIAKPDPGTFQILPWRAEAPGTARMFCDILMPDGSPSFADPRYVLKRMLAKTSDLGFTFYTHPEIEFFLLKDKPLDGSRPTPADNSGYFDHTPQNVGMDFRRQAITMLESMGISVEFSHHEGAPGQQEIDLRYADALSTADNIMTFRLVMKQVALEQGINATFMPKPFSEYPGSGMHTHLSLFEGDRNAFYESGAEYQLSKVGRSFIAGLLKHAAEISAVTNQWVNSYKRIWGGSTRTAGSGGEAPSYICWGHNNRSALIRVPMYKPGKTGSARVEVRSIDSGANPYLTYAVLLAAGLKGVEEGYELPAGADDDVWALSDAERRAMGIEPLPQNLGEAISLMERSELVAETLGEHVFDFFLRNKKQEWEEYRSEVTAFELRKNLPVL
>NZ_CP050177.1|WP_167033585.1|5736806_5736950_-|hypothetical-protein
MREFRQELRSFDRDMREMRDEPWDMSRVPSANIVKDATEDARKESSD
>NZ_CP050177.1|WP_167033588.1|5737414_5738272_-|GNAT-family-N-acetyltransferase
MTEHAAPPTNRPASPTHPSALDRIDHYLDALPRRVGRAEDFGPLTLFVREDGGSPLQARPTRGWRGRPVTPADVAAVRARQRELGLPESFEWVHESAPDLRAAVEATDLPVTPRPLLVLPENAPTPPLADLTPEGVEILTVTPDAPWLPSAVATAHLAFANLGTHVGEVGPAELPEAEEHHATAITLMAMRIREGRTTLVAAVENGIALSSGLLPGVVDGITEICAVATLPTARRRGLALAVTATLIQESRTRGAHTIFLSATDPQVARIYTRLGFHPTATAMET
>NZ_CP050177.1|WP_167033590.1|5738343_5738865_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MARIEPTEPRTEELDTRYGEPGATATPWREAVALLTAAELFWLTTVRPEGRPHVTPLLAVWADGALYFCTGAEERKSRNLAANPEVVLTTGTNALAGGCDLVVEGTAVRVTDEARLTALAGAWEAKYGADWHFEVRDGGFAGDRGNVAVVHEVAPRTAFGFGKAPYSQTRWRF

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Crispr_ID: NZ_CP050177_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_28

5803090-5803303

Orphan

Consensus_repeat	Method
GATGTCCTCAAACGCCGGACGGGCTGG	PILER-CR
CGGGCCCGTTGCCCGTGCGGGTCAA	CRISPRCasFinder

3 spacers

WYL

The CRISPR arrays of NZ_CP050177_28

>merge|NZ_CP050177|28|5803090-5803303|PILER-CR,CRISPRCasFinder
GATGTCCTCAATCGCCGGACGGGCTGGGGTTGCCTCGGGCCCGTTGCCCGTGCGGGTCAAGGATGTCCTCAAACGCCGGACGGGCTGGATGTGGCGCGGGCCCGTTGACCGTGCGGGTCAAAGACGTCCTCAAGCGCCGGACGGGCTTGAGAGGGGTTGCGGTCCGGTCGTGACCGTTGCGGTCACCGATGTCCTCAAACGCCGGACGGGCTTG

>NZ_CP050177|28|5|5803090-5803303|PILER-CR
GATGTCCTCAATCGCCGGACGGGCTGG	GGTTGCCTCGGGCCCGTTGCCCGTGCGGGTCAAG
GATGTCCTCAAACGCCGGACGGGCTGG	ATGTGGCGCGGGCCCGTTGACCGTGCGGGTCAAA
GACGTCCTCAAGCGCCGGACGGGCTTG	AGAGGGGTTGCGGTCCGGTCGTGACCGTTGCGGTCACC
GATGTCCTCAAACGCCGGACGGGCTTG

>NZ_CP050177|28|23|5803125-5803210|CRISPRCasFinder
CGGGCCCGTTGCCCGTGCGGGTCAA	GGATGTCCTCAAACGCCGGACGGGCTGGATGTGGCG
CGGGCCCGTTGACCGTGCGGGTCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167037593.1\|5804838_5805360_-\|DUF4240-domain-containing-protein	unknown	unknown	gnl\|CDD\|379426
NZ_CP050177.1\|WP_167033632.1\|5791192_5793979_+\|RNAseH-domain-containing-protein	unknown	unknown	gnl\|CDD\|372482
NZ_CP050177.1\|WP_167033643.1\|5806548_5807514_-\|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP050177.1\|WP_167033636.1\|5797789_5798758_-\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
NZ_CP050177.1\|WP_167033640.1\|5803394_5804285_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|273800
NZ_CP050177.1\|WP_167033634.1\|5795911_5796379_+\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP050177.1\|WP_167033646.1\|5811242_5813138_-\|2-oxoglutarate-dehydrogenase,-E2-component,-dihydrolipoamide-succinyltransferase	unknown	unknown	gnl\|CDD\|200219
NZ_CP050177.1\|WP_167033647.1\|5813191_5814580_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235798
NZ_CP050177.1\|WP_167037587.1\|5787684_5791182_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375593
NZ_CP050177.1\|WP_167033633.1\|5794278_5795688_-\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|273198
NZ_CP050177.1\|WP_167037590.1\|5797188_5797401_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033644.1\|5807606_5810291_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP050177.1\|WP_167033635.1\|5796479_5797178_-\|DUF4191-domain-containing-protein	unknown	unknown	gnl\|CDD\|379389
NZ_CP050177.1\|WP_167033645.1\|5810510_5811134_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP050177.1\|WP_167033637.1\|5798945_5799755_-\|lipoyl(octanoyl)-transferase-LipB	unknown	unknown	gnl\|CDD\|184638
NZ_CP050177.1\|WP_167033638.1\|5800073_5801576_+\|regulator	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033642.1\|5805551_5806469_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236229
NZ_CP050177.1\|WP_167033639.1\|5801623_5803060_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|366721
NZ_CP050177.1\|WP_167033648.1\|5814867_5816409_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP050177.1\|WP_167033641.1\|5804328_5804823_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167037593.1\|5804838_5805360_-\|DUF4240-domain-containing-protein	gnl\|CDD\|379426	pfam14024, DUF4240, Protein of unknown function (DUF4240). This presumed domain is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 169 and 263 amino acids in length. This domain is often associated with the WGR domain pfam05406.	8.76891e-52
NZ_CP050177.1\|WP_167033632.1\|5791192_5793979_+\|RNAseH-domain-containing-protein	gnl\|CDD\|372482	pfam13111, DUF3962, Protein of unknown function (DUF3962). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 233 and 796 amino acids in length. There is a conserved FSY sequence motif.	1.46e-96
NZ_CP050177.1\|WP_167033643.1\|5806548_5807514_-\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	7.30914e-40
NZ_CP050177.1\|WP_167033636.1\|5797789_5798758_-\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
NZ_CP050177.1\|WP_167033640.1\|5803394_5804285_-\|TIGR01777-family-protein	gnl\|CDD\|273800	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239., TIGR01777 family protein. This model represents a clade of proteins of unknown function including the E. coli yfcH protein. [Hypothetical proteins, Conserved].	4.58141e-131
NZ_CP050177.1\|WP_167033634.1\|5795911_5796379_+\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	5.38797e-13
NZ_CP050177.1\|WP_167033646.1\|5811242_5813138_-\|2-oxoglutarate-dehydrogenase,-E2-component,-dihydrolipoamide-succinyltransferase	gnl\|CDD\|200219	TIGR02927, putative_dihydrolipoamide_acyltransferase, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).	5.94774e-176
NZ_CP050177.1\|WP_167033647.1\|5813191_5814580_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP050177.1\|WP_167037587.1\|5787684_5791182_+\|hypothetical-protein	gnl\|CDD\|375593	pfam18155, pPIWI_RE_Z, pPIWI RE three-gene island domain Z. Poorly-understood domain observed N-terminal to DinG-type helicase, which is part of a conserved three-gene island also containing a REase domain and the pPIWI_RE module. This three gene island is predicted to form a conflict system which targets R-loop formation of invasive plasmids during plasmid replication.	4.73305e-40
NZ_CP050177.1\|WP_167033633.1\|5794278_5795688_-\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|273198	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family].	0
NZ_CP050177.1\|WP_167033644.1\|5807606_5810291_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP050177.1\|WP_167033635.1\|5796479_5797178_-\|DUF4191-domain-containing-protein	gnl\|CDD\|379389	pfam13829, DUF4191, Domain of unknown function (DUF4191).	4.30575e-106
NZ_CP050177.1\|WP_167033637.1\|5798945_5799755_-\|lipoyl(octanoyl)-transferase-LipB	gnl\|CDD\|184638	PRK14345, PRK14345, lipoyl(octanoyl) transferase LipB.	4.99072e-109
NZ_CP050177.1\|WP_167033645.1\|5810510_5811134_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	2.05975e-33
NZ_CP050177.1\|WP_167033642.1\|5805551_5806469_+\|SDR-family-oxidoreductase	gnl\|CDD\|236229	PRK08303, PRK08303, short chain dehydrogenase; Provisional.	5.83145e-179
NZ_CP050177.1\|WP_167033639.1\|5801623_5803060_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	3.49624e-38
NZ_CP050177.1\|WP_167033648.1\|5814867_5816409_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP050177.1\|WP_167033641.1\|5804328_5804823_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.2365e-18

>NZ_CP050177.1|WP_167033639.1|5801623_5803060_-|FAD-dependent-oxidoreductase
MLHLTRGAHPTPRFLRSSCTRATNLGEAHVLSSTHTSAHSADVVIIGAGIAGLAAAHHLTAAGLSVRVLEAAPRPGGRMATEHVDGFRLDRVGPLLSTAYPELLRTPALEGIPLRMFSPGVLVRRDGRLQRAGNADPVERTRTTGTRATAPGPAPTPPRRAHRALTTARALASAPRRGGHDRDPGAPARPDRATHEALAASGLPASAVDGFVRPLLTALLGDPDLSTSSHRADLALRAYARGRLCVPAGGASALPDLLARTLPPGTVVTDVCVTDASINRVTTKEHGETACRSLLVATGARAAAELLPGLRVPDFHPVTVLHHTAPTAPSADPALVLDAETGGPVAHTAVMSAVDPSRTPDGRVLVSSTVLGPPPPAGEVDRLVRAQLAGVYGTPTDDWELLAVHHTPEAVPAMPAPHDPHRPVRLLSGLYVCGDHRDTNTVQGALFSGRRAARAVLGDLGVRPAPGTPDTPPRATAA
>NZ_CP050177.1|WP_167033638.1|5800073_5801576_+|regulator
MSERPPQRIPNRQLAALIAEAGFSNAGLARRVDQLGLEHGLDLRYDKTSVTRWLRGQQPRGTTPALIAEVFTRRLGRRLSAQDLGLDACAPVYAGLEFAATPEEAVDIVGGLWRKDSGSHAELRKIAFTPAGLVVPSRDWLIGRADERVGHPDLATGTPSPYEQGTRGSRDPAAREGPPRVPVQGRPAAVPRQRTERTAGQRVSGGDIAALRSVGELFRALDQAYGGGHARQALVRYLEHEVEPILRGLYGEVTGRRLFAAAADLTRLAGWTSYDIAAHGLAQRYFVQALRLAQAAGDRAYGSYVLITMSRQAVYLGHGREAVQLARVAQQGVGSSAPPVVQALLHAVEARGHAVLGEVRACTASLVRAERALETSRPGDDVPHWGRHFDEAQLADEFGHCYRDLQQYRAAVQHAERSLQLRAPALARSRLFCRVVLATGRLGLGELDQACLLGAEAAQQAAEMRSARAVEYVRDFERRLEPFRDAAAVRNYRDRVAAIG
>NZ_CP050177.1|WP_167033637.1|5798945_5799755_-|lipoyl(octanoyl)-transferase-LipB
MSELRYVHLGFGEESVEYREAWQEQRRVHAARFADELPDTCLLLEHQSVYTAGRRTADSERPLDGTPVVDVDRGGKITWHGPGQLVGYPILKLPRPVDVIAHVRRLEDALIRVAAEFGVETSRVEGRSGVWVLGDPVEERPALGGLTLDFDPRLQDDEFDPRLNGPEYAPSNAGQRREDRKLAAIGIRIAKGVTMHGFSLNVNPDNTWFDRIVPCGIRDAGVTSLAYELGRDVTIAEVLPSVERHLRDVLEGAEPKPRAIVREPERATA
>NZ_CP050177.1|WP_167033636.1|5797789_5798758_-|lipoyl-synthase
MSAVAPDGRKMLRLEVRNSQTPIERKPEWIKTRAKMGPEYTKMQSLVKSEGLHTVCQEAGCPNIYECWEDREATFLIGGDQCTRRCDFCQIDTGKPQALDRDEPRRVGESVVTMDLNYATITGVARDDLEDGGAWLYAETVRQIHAMTAAREAGGTKVELLIPDFNAEPAQLAEVFSSRPEVLAHNVETVPRIFKRIRPGFRYERSLDVITRAREAGLVTKSNLILGMGEERAEVSEALRDLHAAGCELITITQYLRPSVRHHPVERWVKPHEFVELKDEAEAIGFSGVMSGPLVRSSYRAGRLYQQAMDRRGAVVGSQAAV
>NZ_CP050177.1|WP_167037590.1|5797188_5797401_-|hypothetical-protein
MRPSAGLPAVALPSVGTALRVVESLLLSGGQRTARRNAWTAVQEDRRRARDRVEAQHVLEAVSDRTSRAT
>NZ_CP050177.1|WP_167033635.1|5796479_5797178_-|DUF4191-domain-containing-protein
MAAKENADSAANTGRLKQIALTYKMTRRADSKVGLVVAGVGIVTFGVFLAVGFLIDHPIYLGILGFILAFLAMAIVFGRRAERAAFGQMEGQPGAAAAVLENVGRGWTTTPAVAMNRNQDVVHRAVGKAGIVLVAEGNPNRLKSLLAAEKKRMARIVVDVPVHDIIVGDGEGQVPLKKVRTTLLKLPRVLAGPQVTSTNDRLRALGDLMSNMPLPKGPMPKGMRMPRGGKMR
>NZ_CP050177.1|WP_167033634.1|5795911_5796379_+|RDD-family-protein
MDNRQVIGSWLSGPRAAAENMGVDFGYRGERLGLPEHGPGSVAPLGRRFGAIFVDWALCMLIAYGLLAGGNWPKAGNWALGVLLVLSLLTVGTVGFTPGKRLFRLRVVSERGGRLSLPRALVRSVLLCLAVPALVWDRDGRGFHDRLSGAVQVRM
>NZ_CP050177.1|WP_167033633.1|5794278_5795688_-|type-I-glutamate--ammonia-ligase
MFQNADEAKKYIADNDVKFVDVRFCDLPGVMQHFTIPARAFDPAEELAFDGSSIRGFQAIHESDMALRADLSTARVDPFRRDKTVNINFFIHDPITGEQYSRDPRNIAKKAEAYLASTGIADTAYFGPEAEFYVFDSVRFNTTSNESFYHIDSEAGAWNTGSTEDNRGYKVRYKGGYFPAPPVDHFADLRAEISLELEASGLQVERQHHEVGTAGQAEINYKFNTLLAAADDLMLFKYIVKNVAWRNGKTATFMPKPIFGDNGSGMHVHQSLWQGGTPLFYDEQGYAGLSDTARYYIGGILKHAPSLLAFTNPTVNSYHRLVPGFEAPVNLVYSQRNRSAAMRIPITGSNPKAKRVEFRAPDPSSNPYLAFSALLLAGLDGVKNKIEPAEPIDKDLYELAPEEHAGVAQVPTSLPAVLDALEADNEYLQAGGVFTSDLIETWIDYKRTKEIAPIQLRPHPHEFELYFDI
>NZ_CP050177.1|WP_167033632.1|5791192_5793979_+|RNAseH-domain-containing-protein
MYHTVRCLAYEPDPDRGPWMEHLQVLRLGEDLHNELTRRSEEANATGDRPGRLPVTRLNSLLQALAPGTVATARHAGSDGRLPWLYAREAVPVDVLAPVIGTWASGLLVGGEGDDDDDLEETLLTEGSASGPRLPAWENTTIDLTETLISGGGTAEPEQRLYSLLPEQIAFRLAEHPLRIRGTILRFRVVSSASGTDLISWPPQRYERGRQTWYYSARLNITVHTVPFAPRFRVHISAGLRRWATRLDIRPRELDGSTVLLDVPIPWPDSADHRRRLMTNTLGYDRRKREIAWRRRSAAPLLPELDILRHYPDAAELFASPEKWITGRGEVAAGIVYHPSLGPHEVGAGLMPGERATLDAWIEDGLRPVLRRVDDLRRVTRRNTPTLLPRTVKKDEPDTREARKSLARRTALAVALSGQSLDVEVVWQSPETRDALLAELPRLIGLPPGSNTDREKKVWRWRHEGIDITVRTRPAGPLVAALTVAQDRGRRRSVRLAEAVEERCALVLSEVGPPWEGIGLVIAEIADKGRFSAVPDSDPKNALRLAWARQGRPSQFINLPQEDTAAVEHRARSTWLDAFRQLGAVSPPAHRVGAGIPSDLQYVALWMVRYTRKGPTRCPVRRLIAVRVRPGGGGLGDVDGWDAERAEWVPYRQLLLQLADSAKPEESSAPGNRLRQPAGSASDSARAAGRSARWQAQTERQIRELLFQLRERPTLLLVSAGNLRQHWPYLRNGALVRDCLAFGTEPQQRHSLYGEELRVVVLRDANGRNEVAEWYAHDGKGKVGFAEGVWGTSDLEGRVFSSITSTPHTAANLPRGLMKLVPAEGSRTAPGKTAWNPTQLEVTVLGCRSPHSEECGNGSCESVDNAAEWATLTHQLRYHDDYQPLSRPLPLHLARLAGEYVLPLATGGEPAKAGDGLVRTAMEELETT
>NZ_CP050177.1|WP_167037587.1|5787684_5791182_+|hypothetical-protein
MRSLTPPLQDIVGELAAHLGLKTARTKLEGLCQVELGLHLQSKLMPGTPAAHAWVLFSGYGFAEAYGVRLPPDGEKMLRVARYSLWTLRRGRAWREALEEYQRYAPLLRGFDVQDSGRAATRQEISVAASRWRCYDRLLRVAPPLAGRPRPVAQHGPHGFPISRSMAVVDLPEVAAGPLTAHDVDMLPAGDGAPLRFRMRDLERTAAEMDSLHREEDPQRRPRWLKRLKDFTMSVRKDDSFAPSREFTVDGVQHLLGIVGAGKSTLRDVIAVHLAKRGLRTTVVVSDVPDVLKLVQMYNLYTQGAAAPVIGSSNREQHAQRLHRRLAGRGEHRLLAHDDPSFAFLGTSCVLNLHRRSGPVAEPLAFGEAPCSRLRKPADPKPRSARTPEWQRDLLSCPYWSVCPRHHGSRALVRAAIWVATPAGLVDASPPQAQNAQRIRYLELACRRSDLVIIDEADRVQMQLDTVFAPAVLLAGDEERGFIDVLSRHKIRELAASGRTQLSERDVENFTAALNTAGTATDRLYAMLVASDKLREWVRVGYFSAWTLQLGLLDERYPVPEEGTSAVPLHAEREALGKLLDAFRDNPLGDRPRAAEVEFGRLTALLYEILHTGNPDATRQILAEAVTDIFRIDEKFLAGKQEEYERERVKWECKKEKRQRGKKSGSAKAPDPPETPDEWYKELVKRFEFTLLLSALEPRLAMINAMWPRVQSALSLGYNEMYRRPLDYGPMVPEAPMGNVLGFQFRVHGKDEGGVRSGELTFFRCSGVGRELLRALPHLASVDARPGAHLLLMSGSSWAGKSSRYHLREPVGVIIEPPARLTERIAEESTMRFEFIDDGDERLRISGSDVEERPEKMRRIASWLGAGVNEAEDGGPLERELLDLPPGRDQILLLVGSYVEARLVADTLHNLNSRWRDRVLCLISDDEEIDEDDLAPSAYRARSLRRGDVEHLKDARADVLVAPLLAVERGHNILNEDAEAAIGTVYFLARPNPHPDDLSLAVHAVNDWIVRALDNGDFASWVRKGSTVEEGAEEVRSMARSRWHELLQRPMAWSRLGDDREQVTWDMLVLMWQVIGRLVRGGVPARVVFVDAAFAPHRASNPPRPDTPRSSLLHSVLDVLDPYLVNDNEPADHRFIVRALYEPLWRMLSRCLAQPPSAPDDFRTT
>NZ_CP050177.1|WP_167033640.1|5803394_5804285_-|TIGR01777-family-protein
MRIAVTGSTGLIGTALVSSLRADGHEVVRLVRRPSRTGDEVEWDPARQYVDTAGLHGCEAVVHLAGAGIGDHRWTDAYKKELRDSRVLGTAAIAEAVASLDVPPRVLVSGSAVGYYGDTGDRAVDESAPPGDGFLPSLCVEWEEAASAAEEAGIRTVFARTGLVVSPEGGAWGRMFPLFRAGLGGRLGSGDQYWSFVALHDHVAALRHLIDTESLAGPVNVTAPSPATNREVTAAMGAALRRPTLFPVPGAVLRVVLGELSSDILTSQRVLPGRLLDSGFTFAFPTVRDAVGAALS
>NZ_CP050177.1|WP_167033641.1|5804328_5804823_+|GNAT-family-N-acetyltransferase
MSESRIRPAVQDDDEALGELDRETWSPLHAVSPRPRPPYDPFYDDRHRPEEHLVAEIGDHLVGYIRIARPTTLPCNAHVRQIQGLAVRESARGHGVGRALLRAALLHARNQGARRLTLRVLGHNVAARRLYEAEGFAVEGVLPGEFLLEGEYVDDVFMGRSLLD
>NZ_CP050177.1|WP_167037593.1|5804838_5805360_-|DUF4240-domain-containing-protein
MDETEFWEIIDSTREAADGDPEDHAELLVERLLQLDPDSVLDFARHFEARYNRAYHWDLWGAAAVLLGGASDDAFDYFRCWLIGQGREIFEGALHDPDSLAELLDEFDEDLDGDGEELGYAADEAYEQLTGVVAPDLGVAAQPAEPEGTPVDFEDTTALADRFPRLSDRFGTP
>NZ_CP050177.1|WP_167033642.1|5805551_5806469_+|SDR-family-oxidoreductase
MTDQPLTGRTTLVAGATRGAGRAIAVALGAAGATVYVTGRTTREKASEVGRTTETIEETAELVTEAGGEGIAVPTDHLEPDQVRALVARIDREQGRLDVLVNDVWGGEHLVEFGKKMWETELERGLRMLELSVKTHAITSSCALPLLVREPGGLVVEVTDGTAETNKAFRENFYYDLAKNGPIRMAFNLAEDLRSVGGTAVSVTPGFLRSEQMLDHFGVREENWRDAVGTDPVFAISESPAFVGRAVAALASDPDRHRWTGRSLSSFSLAQEYGFTDADGSTPNAWGYITDVVNGGKDVPAADYR
>NZ_CP050177.1|WP_167033643.1|5806548_5807514_-|WYL-domain-containing-protein
MRAARLIKMVLLLQSRPSMTAAELAGELEVSERTVTRDAQALSEAGVPVYADRGRTGGYRLVGGYRTRLTGLARGEAEALFLSGVPGALREMGLGDVSSAARLKVSAALMPSLRDAPESAARRFHLDAPGWYQEPRTPELLPAVAEAVWGDRLLAVRYRRADGEVARELAPYGLVLKAGVWYLCACAGGGFRVYRLDRFTAVEPLAERFVRDESFDLPGFWEERAAQFARSLLRTEIGIRLSPAGVRALPHVVDRASAHEALDAAPAPDERGRVTLTLPVESEDVAYTQLLGLGAEVEVLRPLTLRTRLAESAERVRALYA
>NZ_CP050177.1|WP_167033644.1|5807606_5810291_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MTDPVGKFPSELDQLPDRDTEETAEWAASLDAVTEHAGPHRAAYLLRRTLQHAGTAGVPVPALLESDYVNTIPTAAEPAFDGDEAMESRITAWNRWNAAAMVTRGARYGVGGHIATFASAAWLYETGFNHFFQGKEGDGSGDQLYIQGHASPGIYARAFLDGRLSEQDLDHFRQEAGGQGLPSYPHPRRLPWLWEFPTVSMGLGPLSAIYQARFNRYLANRGIKDTSASHVWAFLGDGEMDEPESTASLALASREKLDNLTFVINCNLQRLDGPVRANFKIVQELEAQFRGAGWNVIKSLWGSAWDELFALDTTGALVRRLREVPDAQFQTYATRDVAYIREHFFGAEPALVELAKLLTDAKIAECFFTSRGGHEARKVYAAYRAALAHKGAPTVILAQTVKGYTLGAGFESRNANHQMKKLSGDQFRTMRDLLDLPIPDSKLDDGLVPYGHPGADSPEVRYLQERRAELGGPAPARRTHAVALPAPAEKPFQTVYKGSGSQPVATTMAFVRLMKDLMRDKETGKRWVPIVPDEARTFGMEALFPAYGIYSPLGQTYDPVDRDQLLYYKEAKDGQILNEGITEAGSMADFIAAATSYATHGETMIPFYIFYSMFGWQRTGDQMWQLADQLGKGFIVGATAGRTTLTGEGLQHADGHSHLIASTNPAALNYDPAFAYEIAVIVKDGLRRMYTPTPDAPSGEDVFYYLTVYNEPMPQPAMPEGVEEGILKGLYRFKEGVPATSDAPRVQLLASGTAIHWILEAQDLLAADWGVTADVWSATSWGELRRDGLAADEALLRGEERVPYVTRALAGAPGPVLAVSDWMRQVPDQISQWVEQDYTSLGTDGFGLSDTREAARRHFGVDARSIVVAALAQLARRGEVKPEKVLEARERYGL
>NZ_CP050177.1|WP_167033645.1|5810510_5811134_-|GntR-family-transcriptional-regulator
MIPPVVHSLREQIREHIVEGIVSGRWKPGERIVERRIATELQVSQTPVREALRELESLRLIESAPNKGVRVRNLTAADLEESYPVRAGLEQIAAELAAERLARDCSALEPHVTALYDADRTADGTAQVRHTVAFHRELVRAAGNAVLLHTWEGLGIEVFTALSIRWLGTVQKSYAEEHQDLVEAFRRRDPTIGALVKVHVLGCAPRA
>NZ_CP050177.1|WP_167033646.1|5811242_5813138_-|2-oxoglutarate-dehydrogenase,-E2-component,-dihydrolipoamide-succinyltransferase
MAVSVTLPALGESVTEGTVTRWLKAEGERVEADEPLLEVSTDKVDTEIPAPVAGVLASIKVAEDETVEVGAELAVIDDGSGAPAADAAPAAEAAPAPAAPAPAQEAPAQAAPQQPAPAAEAVPSTETEAPAPAPTAQAAAGGGGAEGTDVVLPALGESVTEGTVTRWLKEVGESVEADEPLLEVSTDKVDTEIPAPVAGVLLEIVVAEDETAEVGSRLAVIGAPGAAPAPAAAPAAPAPAAAPAPAPAAAPAPAPAPAAQAPAPAAPAPAPAPQAPAAPAPAAQAPAAPAPAPQQATPAPAPAKPATPAPAPAATAGDDGAYVTPLVRKLATENGVELGSVKGTGVGGRIRKQDVLAAAEAAKAAAKAAAAAPAAKAPAAASKAPKLEASPLRGQTVKMTRMRKVIGDNMMKALHEQAQLTSVVEVDITKLMRLRNQAKESFAAREGVKLSPMPFFVKAAAQALKAHPVINARINEGEGTITYFDTENIGIAVDSERGLMTPVIKGAGDLNIAGISKKTAELAAAVRASKITPDDLASGTFTISNTGSRGALFDTIIVPPNQAAILGIGATVRRPVVIDHPDLGETIAVRDMTYVALSYDHRLVDGADAARYLTAVKAILEAGEFEVELGL
>NZ_CP050177.1|WP_167033647.1|5813191_5814580_-|dihydrolipoyl-dehydrogenase
MANDASTVFDLVILGGGSGGYAAALRGAQLGLDVALIEKNKLGGTCLHNGCIPTKALLHAGEIADQARESEQFGVKATFEGIDIAGVHKYKDDVIAGLYKGLQGLVASRKVTYIEGEGRLSSPTSVDVNGQRVEGRHVLLATGSVPKSLPGLVIDGERVISSDHALTLNRVPESAIILGGGVIGVEFASAWKSFGTDVTVIEGLKHLVPVEDENSSKLLERAFRKRGIKFNLGTFFDKAEYTQDGVRVTLADGKTFEAEVLLVAIGRGPVSQGLGYEEQGVAIDRGYVVVDEYMRTNVETISAVGDLVPTLQLAHVGFAEGILVAERLAGLKTVPIDYDGVPRVTYCHPEVASVGITEAKAKEIYGADKVVALKYNLAGNGKSKILKTAGEIKLVQVKDGAVVGVHMVGDRMGEQVGEAQLIYNWEALPAEVAQLIHAHPTQNEALGEAHLALAGKPLHSHD
>NZ_CP050177.1|WP_167033648.1|5814867_5816409_-|leucyl-aminopeptidase
MTALTLSTAGAATLRADVIVVGVAKGAGGPVVAPGAEAVDQAFDGKLAAVLETLGASGAEGEVTKLPAPSGLKAPVVLAVGLGPAPGKEEAYASEALRRAAGSASRALSGTKKAVFALPVEDAEDVEAVAEGALLGAYAFTVYLGGEKSAKKNGGNGNGPKLPLGEVALLGAKPRDKAHKAAADRAIALTDEVNRARDLINTPPNDLTPEAFAAVAAAAGKEHGVKVQVLDEKALAKGGFGGILGVGQGSVNPPRLVKLAYTHPEAEKTLALVGKGITYDSGGISLKPPGHNETMKCDMSGAAAVFAAVITAARLGLRVNVTGWLALAENMPSGSATRPGDVLRMYSGKTVEVLNTDAEGRLVLADALTRASEENPDAIVDVATLTGAMILALGNRTFGIMSNDDAFRTSLHEIAEEVGEASWPMPLPADLRKGMDSPTADIANMGERMGGGLVAGLFLKEFVGEGITWAHLDIAGPAFHEGAPFGYTPKGGTGSAIRTLVRLAERTAAGDLG

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Crispr_ID: NZ_CP050177_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_29

5881486-5881695

Orphan

Consensus_repeat	Method
GTCCTCAAGCGCCGGACGGGCT	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP050177_29

>merge|NZ_CP050177|29|5881486-5881695|PILER-CR
AGCCCGTCCGGCGTTTGAGGACATCTTTGACCGCAACGGTCCCGCCCGACCGCAACCCCCTCCAGCCCGTCCGGCGCTTGAGGACGTCCTTGACCCGCACGGGGCAACGGGCCCGGGCCACAATCAGCCCGTCCGGCGCTTGAGGACATCGGTGAGCCGCGCCCGCGCAACGAGCCGACGCCCAACCAAGCCCGTCCGGCGATTGAGGAC

>NZ_CP050177|29|6|5881486-5881695|PILER-CR
AGCCCGTCCGGCGTTTGAGGAC	ATCTTTGACCGCAACGGTCCCGCCCGACCGCAACCCCCTCC
AGCCCGTCCGGCGCTTGAGGAC	GTCCTTGACCCGCACGGGGCAACGGGCCCGGGCCACAATC
AGCCCGTCCGGCGCTTGAGGAC	ATCGGTGAGCCGCGCCCGCGCAACGAGCCGACGCCCAACCA
AGCCCGTCCGGCGATTGAGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167033699.1\|5878203_5879163_-\|deoxyribonuclease-IV	unknown	unknown	gnl\|CDD\|214707
NZ_CP050177.1\|WP_167033706.1\|5887022_5887940_+\|methylenetetrahydrofolate-reductase-[NAD(P)H]	unknown	unknown	gnl\|CDD\|366988
NZ_CP050177.1\|WP_167033704.1\|5885775_5886141_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|375793
NZ_CP050177.1\|WP_167033708.1\|5888958_5890488_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154
NZ_CP050177.1\|WP_167037604.1\|5872152_5872830_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP050177.1\|WP_167033692.1\|5870054_5870768_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP050177.1\|WP_167033701.1\|5882723_5883926_-\|glycine-oxidase-ThiO	unknown	unknown	gnl\|CDD\|274092
NZ_CP050177.1\|WP_167037607.1\|5879169_5881140_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP050177.1\|WP_167033693.1\|5870830_5872144_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP050177.1\|WP_167033697.1\|5876884_5877364_-\|bacterioferritin	unknown	unknown	gnl\|CDD\|153099
NZ_CP050177.1\|WP_167033703.1\|5884477_5885698_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|369639
NZ_CP050177.1\|WP_167033696.1\|5876620_5876881_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|377304
NZ_CP050177.1\|WP_167033694.1\|5872909_5874820_-\|phenazine-specific-anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|223225
NZ_CP050177.1\|WP_167033695.1\|5875095_5876448_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
NZ_CP050177.1\|WP_167037610.1\|5882502_5882703_-\|sulfur-carrier-protein-ThiS	unknown	unknown	gnl\|CDD\|273754
NZ_CP050177.1\|WP_167033700.1\|5881703_5882501_-\|thiazole-synthase	unknown	unknown	gnl\|CDD\|234687
NZ_CP050177.1\|WP_167033707.1\|5887991_5888921_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033705.1\|5886232_5886898_+\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|234590
NZ_CP050177.1\|WP_167033698.1\|5877519_5878149_+\|sulfite-oxidase-like-oxidoreductase	unknown	unknown	gnl\|CDD\|239027
NZ_CP050177.1\|WP_167033702.1\|5884085_5884445_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167033699.1\|5878203_5879163_-\|deoxyribonuclease-IV	gnl\|CDD\|214707	smart00518, AP2Ec, AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites.	1.50153e-101
NZ_CP050177.1\|WP_167033706.1\|5887022_5887940_+\|methylenetetrahydrofolate-reductase-[NAD(P)H]	gnl\|CDD\|366988	pfam02219, MTHFR, Methylenetetrahydrofolate reductase. This family includes the 5,10-methylenetetrahydrofolate reductase EC:1.7.99.5 from bacteria and methylenetetrahydrofolate reductase EC: 1.5.1.20 from eukaryotes. The structure for this domain is known to be a TIM barrel.	5.35614e-140
NZ_CP050177.1\|WP_167033704.1\|5885775_5886141_+\|DNA-binding-protein	gnl\|CDD\|375793	pfam18367, Rv2175c_C, Rv2175c C-terminal domain of unknown function. This is the C-terminal domain of unknown function found in actinomycetes such as M. tuberculosis Rv2175c. Rv2175c has a DNA binding activity and possesses a winged helix-turn-helix fold, furthermore it is identified as a substrate of the PknL kinase.	2.32156e-28
NZ_CP050177.1\|WP_167033708.1\|5888958_5890488_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	6.73936e-56
NZ_CP050177.1\|WP_167037604.1\|5872152_5872830_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.35464e-66
NZ_CP050177.1\|WP_167033692.1\|5870054_5870768_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	5.43624e-48
NZ_CP050177.1\|WP_167033701.1\|5882723_5883926_-\|glycine-oxidase-ThiO	gnl\|CDD\|274092	TIGR02352, Glycine_oxidase, glycine oxidase ThiO. This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	3.46903e-124
NZ_CP050177.1\|WP_167037607.1\|5879169_5881140_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.02579e-104
NZ_CP050177.1\|WP_167033693.1\|5870830_5872144_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.71693e-22
NZ_CP050177.1\|WP_167033697.1\|5876884_5877364_-\|bacterioferritin	gnl\|CDD\|153099	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain. Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) bestowing ferroxidase activity.	5.76642e-74
NZ_CP050177.1\|WP_167033703.1\|5884477_5885698_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|369639	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.	6.24842e-56
NZ_CP050177.1\|WP_167033696.1\|5876620_5876881_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|377304	pfam04324, Fer2_BFD, BFD-like [2Fe-2S] binding domain. The two Fe ions are each coordinated by two conserved cysteine residues. This domain occurs alone in small proteins such as Bacterioferritin-associated ferredoxin (BFD). The function of BFD is not known, but it may may be a general redox and/or regulatory component involved in the iron storage or mobilisation functions of bacterioferritin in bacteria. This domain is also found in nitrate reductase proteins in association with Nitrite and sulphite reductase 4Fe-4S domain (pfam01077), Nitrite/Sulfite reductase ferredoxin-like half domain (pfam03460) and Pyridine nucleotide-disulphide oxidoreductase (pfam00070). It is also found in NifU nitrogen fixation proteins, in association with NifU-like N terminal domain (pfam01592) and NifU-like domain (pfam01106).	1.80188e-10
NZ_CP050177.1\|WP_167033694.1\|5872909_5874820_-\|phenazine-specific-anthranilate-synthase-component-I	gnl\|CDD\|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	1.05838e-52
NZ_CP050177.1\|WP_167033695.1\|5875095_5876448_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP050177.1\|WP_167037610.1\|5882502_5882703_-\|sulfur-carrier-protein-ThiS	gnl\|CDD\|273754	TIGR01683, thiamine_biosynthesis_protein_ThiS, thiamine biosynthesis protein ThiS. This model represents ThiS, a small, ubiquitin-like thiamine biosynthesis protein related to MoaD, a molybdenum cofactor biosynthesis protein. Both proteins are involved in sulfur transfer. ThiS has a conserved Gly-Gly C-terminus that is modified, in reactions requiring ThiI, ThiF, IscS, and a sulfur atom from Cys, into the thiocarboxylate that provides the sulfur for thiazole biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	3.59967e-21
NZ_CP050177.1\|WP_167033700.1\|5881703_5882501_-\|thiazole-synthase	gnl\|CDD\|234687	PRK00208, thiG, thiazole synthase; Reviewed.	9.65067e-149
NZ_CP050177.1\|WP_167033705.1\|5886232_5886898_+\|thiamine-phosphate-synthase	gnl\|CDD\|234590	PRK00043, thiE, thiamine phosphate synthase.	2.97944e-84
NZ_CP050177.1\|WP_167033698.1\|5877519_5878149_+\|sulfite-oxidase-like-oxidoreductase	gnl\|CDD\|239027	cd02109, arch_bact_SO_family_Moco, bacterial and archael members of the sulfite oxidase (SO) family of molybdopterin binding domains. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	1.77982e-89

>NZ_CP050177.1|WP_167037607.1|5879169_5881140_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase
MLDSRYRVDARIAVGGMATVYRALDTRLDRVLALKVMHPALAADAAFVERFIREAKSVARLAHPNVVGVFDQGAQGAYVYLAMEYVEGCTLRDVLRERGALQPRAALDILEPVLAALGAAHRAGFVHRDMKPENVLIGDDGRVKVADFGLVRVMGDVTNSTGTVLGTVSYLAPEQIEHGTSDTRVDVYACGVVLHEMLTGGKPHAGDTPAQVLYLHLNADVPAPSAAVPGLALELDELVAAATARNPEIRPYDAVALLALTREARSRLSDAQLDAVPPKAKPVPEGGPDSRTTVIERVLPPEEPDGAHSSHHAHASHGSHGSEEPTRNTRTPKADGVHRTSRLEMAPPDLPHAAAPRRTARPPRRGLIAAVVAVLLVLGVGTGVWYINSGQFTRVPSLLGQSEQEAKKRLADAGLDVQVSTDFSDTFARGTVMGSDPASRARVRGGGPVTLVVSRGPKVVKVPDLEGATLAEAKRALKQAGLAAGVVSRSFDDGVEQGAVISSDPAAGAEVQPDAGIRLVVSKGSPLEMEDVTGETQEDATARLTDAGLKVRIAPGRVNSPVDAGSVAKQSVAEGRQLARGDTVTLTLSKGPRQVTVPDVEGRKLDEAKKALEDAGFQVSVDRSFPFLDDTVSEQSVAGGDTAPEGSTITIKTKGL
>NZ_CP050177.1|WP_167033699.1|5878203_5879163_-|deoxyribonuclease-IV
MPDPAPGRTPAEGRIPAEGRLPAGGRDPVAGRNPVGGHVPVAGGLAATGLAYARELGAETVQVFAANPRGWATPAGNPAQDELFRAACADAGMPAYVHAPYLINFGSHTEATADRSVDSLRHSLRRAREIGAPGVVVHTGSATGGRSREVALAQVRDRMLPLLDELTRDDDPFLLLESTAGQGFSLCSRTWDFGPYFEALDSHPKLGICLDTCHIFAAGHDLAEPGGTHRTLDLLVETVGAGRLKLIHANDSKDVAGAHKDRHENIGTGHIGEDAFRALFTHPATEGVPLVIETPGGKEGHAADVALLKKLREQAGQGK
>NZ_CP050177.1|WP_167033698.1|5877519_5878149_+|sulfite-oxidase-like-oxidoreductase
MGQPNRERQEPDQAELPPGQRLQRGWPVTHYGPVPRFRPERWEFRVFGATLDGDKHCWNHQEFSALPFSTVIGDLHCVTKFSMVGAEWGGVPARTVLELAPPAPDVTHVMVWAEYGFSANLRLADFAADRTIFATHKDGELLTAEHGFPLRLVVPQLYAWKGPKWVRGVEYMTADRRGFWEERGYHNVGDPWAEQRYSYQEGPGEGPEL
>NZ_CP050177.1|WP_167033697.1|5876884_5877364_-|bacterioferritin
MQGDPEVLEFLNEQLTAELTAINQYFLHAKMQENFGWTKLAKYTRAESFDEMKHAELLTDRILFLDGLPNYQRLFHVRVGQTVTEMFQADREVEVEAIDRLKRGIDVMRQKSDHTSKRIFESILADEEHHIDYLDTQLALIEKLGEPLYLAQVIEQPDS
>NZ_CP050177.1|WP_167033696.1|5876620_5876881_+|(2Fe-2S)-binding-protein
MNRVYVCSCFGITEKQVREHADSGACTPRQIASASKAGTDCGSCVRRIQSLLGRGAVCPRRELLAEAVPAESAPAVVTRTGLGEAA
>NZ_CP050177.1|WP_167033695.1|5875095_5876448_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MTVNAQNPATHVPTWKDLPAAQQPEYPDRDALRGVVAELESYPPLVFAGECDQLRARMAAVAKGEAFLLQGGDCAEAFDGVSADHIRGKLKTLLQMGAILTYAASVPVVKVGRIAGQYSKPRSKDTETRGGVTLPTYRGDSVNGFAFDEKSRVPDPERLKRMYNASAATLNLVRAFTTGGYADLRQVHAWNQDFVKSSPSGQRYEQLAREIDNALNFMKAAGTDPAEFRTVEFYASHEALLLDYETALTRVDSRTGELYDVSGHMVWIGERTRQLDGAHIEFASRIRNPIGVKLGPTTTVDDALAYVDRLDPDREPGRLTFIVRMGADKVRDKLPELVQKVTASGATVAWVTDPMHGNTFEAASGHKTRRFDDVLDEVKGFFEVHKGLGTHPGGIHVELTGDDVTECVGGGDEIFVDDLHQRYETACDPRLNRSQSLDLAFLVAEMYRAQ
>NZ_CP050177.1|WP_167033694.1|5872909_5874820_-|phenazine-specific-anthranilate-synthase-component-I
MTETSTAALLDRLLDPASPPFALLRRRTPGRDHDVVELLIGPVQEAARLADLPDGSRTALALVPFRQIRERGFDVRDDGTPLAVLVADERYELPLDEVLGLLPEHAVRVEGGAFDVDDERYARIVRRVVEDEIGSGEGANFVIRRTFEGRIPGFGRADALALFRRLLAGERGAYWTFVVHAGERTLVGASPEVHVRMSGGTVVMNPISGTFRYPPGGPTAEGLLGFLGDRKETEELSMVVDEELKMMCTVGDRGGVVIGPRLKEMAHLAHTEYELRGRSSLDVREVLKETMFAATVTGSPVQNACRVIERHEEGGRGYYAGALALIGRDAGGAQTLDSPILIRTADIDGEGGLRVPVGATLVRHSDPAGEVAETHAKAAGVLAALGVRPGPSRTAREAPRLADDPRVRAALDARRADLSPFWLRMRTAPAPLAGHALVVDGEDTFTAMLAHLLRSSGLEVTVRRFDEPGLRPAALAHPGPVVLGPGPGDPADPADPKMGLLRELAAGLLRDRRHGLLGICLGHELIAVELGLETVRKRVPHQGAQTGVDLFGRAETVGFYNSFTATCDDAAAVELAAHGIEVSRGDGGTDDGEVHALRGPGFASVQFHPESVLTLNGPEIVRELLAGAMSGARAGV
>NZ_CP050177.1|WP_167037604.1|5872152_5872830_+|response-regulator-transcription-factor
MTGTTAGPVRVMVVDDHPMWRDAVARDLDAAGFEVIATAGDGPQAVRRAKATAPQVLVLDLNLPGMPGVQVCKELVGLQPGLRVLVLSASGEHADVLEAVKSGATGYLLKSASTEELVDAVRRTAVGDPVFTPGLAGLVLGEYRRLASEPAPAAPDEPKAPQLTERETEVLRLVAKGLSYKQIAERLVISHRTVQNHVQNTLGKLQLHNRVELVRYAIERGLDDA
>NZ_CP050177.1|WP_167033693.1|5870830_5872144_+|sensor-histidine-kinase
MVKRERVVRMSVEQPLWRALTGYRVLTAVYAILLFVFERGKFERPWVAIAFLAFLAVWTAATLPRVANAASCTKRFLVADLTVAVVGILLTPLADEQAQHVDGPTLPTIWAAGSVLAFAIKGGWRWAALASTIVAVANLVERAHPSRDTLHNVLLVWIASIAIGYIVEVARASERVLAHALEIEAATRERERLARDIHDSVLQVLAMVQRRGTALGGEAAELGRMAGEQEIALRTLVSSGLVPTARASHDALAGGGFLRTDDGQDDGTGHGPGPRRDGGPDHRHDHGRGAGLGKGRAAPDAGPQAPCDLRSLLAPYTGSKVTFAEPGAPVLLAPAAARELAAAVGAALDNVGRHAGTDARAWILVEDDPDEVVVTVRDDGPGIPEGRLAQAEGEGRLGVALSIRGRLRDLGGTAELISVPGQGTEVELRVPRGKAER
>NZ_CP050177.1|WP_167033692.1|5870054_5870768_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MIYGAMKFSVGGSLKLAFRPWVEGIENVPAEGPAILASNHLSFSDSFFLPAVLDRKVTFIAKAEYFTTPGIKGKLTAAFFKGVGQLPVDRSGARGAGEAAIKSGVDVLAKGELFGIYPEGTRSPDGRLYRGKPGGLARVALASGAPVIPVAMIDTEKIQPPGKVVPKLMRPGIRIGKPLDFSRYQGMEGDRFILRSVTDEVMYEIMKLSGQEYVDVYATAAKRQLAEAAKEKSPTGE
>NZ_CP050177.1|WP_167033700.1|5881703_5882501_-|thiazole-synthase
MADDRLVIGDTVLDSRLIMGTGGAPSLDVLRRSLIASGTELTTVAMRRLDPTVQGSVLSVLESLGIRALPNTAGCFTAGEAVLTARLAREALGTDWIKLEVVADERTLLPDPIELLDAAETLVDDGFTVLPYTNDDPVLARKLEDVGCAAIMPLGSPIGSGLGIRNPHNFELIVEHARVPVILDAGAGTASDAALAMELGCAAVMLASAVTRAREPELMAAAMRHAVSAGRLAWRAGRIPRRHFAHASSPSEGVPTLDPERPAFA
>NZ_CP050177.1|WP_167037610.1|5882502_5882703_-|sulfur-carrier-protein-ThiS
MTISVNGEPRAIGAATTLDALVATLTPAPSGVAAAVNETVVPRTRWSGTLLGEGDRVEVLTAVQGG
>NZ_CP050177.1|WP_167033701.1|5882723_5883926_-|glycine-oxidase-ThiO
MQSSRTDQHPRTAPTEISDVLVVGGGIIGLVIAWRAAQRGLRTVVADPEPGGGAARVAAGMLAAVTELHYGEETLLGLNLASAARYPAFVAELEEAAGQDTGYRACGTLAVALDADDRAHLRELHGLQQRSGLTSEWLSGRECRRLEPMLAPGVRGGLRVDGDHQIDPRRLAAALVTACERAGVLFHRAFASRLTVVRDRATGVVLEDGGVLTADRTVLAGGSLSGKLAGLPSDVVPPVRPVKGQVLRLRVPRAYAPFLSRSVRAVVRGSHVYLVPRENGELVVGATSEEQGWDTTVTAGGVYELLRDAHELVPGITELPFTEASAGLRPGSPDNAPLLGPTALPGLDLATGHYRNGVLLTPVTGDAMADVLTTGELPEVARPFTPRRFSPAPARQEQLA
>NZ_CP050177.1|WP_167033702.1|5884085_5884445_+|hypothetical-protein
MARSLDGLVLAPVADQAPGQVGTRTRFTYHERDGRIWAAYEGGDVERGYLVGTREGDRLDFRYVQLKRDGGTSAGHCVSLVVDLPDGRVRLEETWEWESREGSGTSVVEELPSGVPSVD
>NZ_CP050177.1|WP_167033703.1|5884477_5885698_+|FAD-dependent-oxidoreductase
MSEQRRHPEERNVVIVGAGMAGVQTAVALREGGFRDRITLIGAEPHPPYDRPPLSKAVLLGQADGSSFDIDFAALGVELRLGLAVTGLRADVRELDTADGPVPYDVLVLATGAEPVRLPGTDGLPGVHLLRTLDDAERLRPVLARRDDVVVVGAGWIGAEFATAAREAGCAVTVVEAADRPLAGVLPAEVAAPMSGWYAESGAELLTGTRVASIEPGAVVLADGRRLAAGAVVVGVGARPATGWLAGSGVELGPDGSVTADEGLGTSLPGVYAVGDCASFPSARYGARLLVHHWDNALQGPRTVAARITGEGEGVYDPVPYFWSEQFGRFVQYAGHHAPSDTLVWRGAPAEAAWSVAWLREGALVALLAVGRPRDLAQARKLLETAARLDPRLLADPSVPLKKAVV
>NZ_CP050177.1|WP_167033704.1|5885775_5886141_+|DNA-binding-protein
MTEIDAKIDALVPAWLHLPDIAELFDIEVTRVRQLVKEGQLIAVRRGENRALQVPAAFIDGGKVVKGLAGTLTLLRDDGWTDEEMLEWLFTSDPTLPGTPAQALSENRGTEVKRRAQALAV
>NZ_CP050177.1|WP_167033705.1|5886232_5886898_+|thiamine-phosphate-synthase
MPAERTSAERAALSDARLYLCTDARRKQRDLPDFLDAVLASGVDIVQLRDKGMEAAEELEHLQVFAEAARRHGVLLAVNDRADVAHAIGADVLHLGQGDLPVPAARAILGGTPMIGRSTHAEAEVDAAVAEPGVDYFCTGPCWPTPTKPGRHAPGLDLVRYAAGLATDRPWFAIGGIDAGNLDQVLDAGARRVVVVRAITEADDPAAATASLAKRVRERSR
>NZ_CP050177.1|WP_167033706.1|5887022_5887940_+|methylenetetrahydrofolate-reductase-[NAD(P)H]
MAFGTPSTRTDHAPTVRDLLAAGETTYSFEFWAPKTEKGERNLWNALRRVEGVAPSFVSVTYGAGGSTRSGTVKATERIAADTTLTPVAHLTAVGQSVAELRNMIGQYADAGIRNILAVRGDPPGDPMGEWVKHPQGVRYAAELVRLIKESGDFCVGVAAFPEMHPRSSDWDTDIRHFVDKCRAGADYAITQMFFEPDGYLHLRDRVESAGCTTPIIPEIMPVTSVKMLERLPQLSTAAVPAALKERILAVKDDPAAVRSIGIEFATEFCAGLLAEGVPGLHFITLNNSTATLEIYENLGLREQS
>NZ_CP050177.1|WP_167033707.1|5887991_5888921_+|hypothetical-protein
MGWTVLYIAFGIVALWLLGEVLLQYKARLRWRLLAFTGFMGVVLGVLMPSVFVIALGAIAFAVGQAYVTLSFRRGFSTGWALGGSPGASRRRKAVGAVEQEPTLEVSDLEYEPAMAGPAADVPMDAAMTATMGAVYEPQPLPDDTGQYGVYKDDQAQDNPYGEAFDAFAGYGQAAAGQPYAAQDPYADQQTAYQTGQGVYAAQDTGQGAGQDAYAQYGYGADQSYAAYADPYTGAGDGGQQAGAYDSYGGQQQYADPYAAQQYSVDTPPGGVWVPQQRENDQQVPPMPQDQPHEYGYDPGYNNEQQYRY
>NZ_CP050177.1|WP_167033708.1|5888958_5890488_-|NAD(P)/FAD-dependent-oxidoreductase
MARIVVIGAGMGAMAAAARLAVAGHRVTVYERAATYGGSVGRFAREGFVFDTGPGLLHLPAVYRDLFVKTGKEPLEACVELRQVDPASRHVFADGTDVLLPNASRAGVVSALDAALGGGAGERWGDFLGRARDTWERSRRPLLEEPLPADRGPLAHEPYPAVRHRRLLRGARRAATVAEIGAWELADPRLAALLDGYALAYGLDPRRAPASAAVLPYLEQTFGSWYVGGGMRELARAVHERCLARRVEFVFGAAVTRIVEKDGAATGVELADGTVVAADRVVTGVDPGPLAGREVREAGDTGPEGRDVRPGGRDASPAPARFTVLLALRGGRPAGAAHRTVVHSPDGPAEAADLFAGRRAARPTVTVLRPDDPATRPGGDHEAVTITATVAPQGSVDWTDDAVRERYADVLVAAAEAAVPGLAGRVEWREVRTPADTAELTGAPGGSVPAPALAGADGAFLYPANGTALAGLHRVGGLAHPGGGLAHAGMSGALVAGLIVEGADFRGSR

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Crispr_ID: NZ_CP050177_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_30

5935469-5935680

Orphan

Consensus_repeat	Method
GATGTCCTCAAACGCCGGACGGGCT	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP050177_30

>merge|NZ_CP050177|30|5935469-5935680|CRISPRCasFinder
GATGTCCTCAAACGCCGGACGGGCTTGGTTTGTGCGTCGGCCCGTTGCGCGGGCGCGGCTTAAAGATGTCCTCAATCGCCGGACGGGCTGGATTGTTGCGCCCGTTGTCCCGTGCGGGTCAAAGACGTCCTCAATCGCCGGACGGGCTTGAGAGGGGTTGCGGTCGGTCGTGACCGTTGCGGTTACCGATGTCCTCAATCGCCGGACGGGCT

>NZ_CP050177|30|24|5935469-5935680|CRISPRCasFinder
GATGTCCTCAAACGCCGGACGGGCT	TGGTTTGTGCGTCGGCCCGTTGCGCGGGCGCGGCTTAAA
GATGTCCTCAATCGCCGGACGGGCT	GGATTGTTGCGCCCGTTGTCCCGTGCGGGTCAAA
GACGTCCTCAATCGCCGGACGGGCT	TGAGAGGGGTTGCGGTCGGTCGTGACCGTTGCGGTTACC
GATGTCCTCAATCGCCGGACGGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167033748.1\|5943135_5944467_+\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|234853
NZ_CP050177.1\|WP_167033739.1\|5928542_5929883_-\|DUF2252-domain-containing-protein	unknown	unknown	gnl\|CDD\|313268
NZ_CP050177.1\|WP_167033740.1\|5930084_5933624_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NZ_CP050177.1\|WP_167033744.1\|5937964_5938693_+\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033737.1\|5926860_5927679_-\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|372611
NZ_CP050177.1\|WP_167033746.1\|5939497_5940238_-\|LON-peptidase-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366967
NZ_CP050177.1\|WP_167033736.1\|5926223_5926793_+\|dienelactone-hydrolase	unknown	unknown	gnl\|CDD\|223489
NZ_CP050177.1\|WP_167033747.1\|5940243_5941272_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033749.1\|5944463_5945606_+\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235115
NZ_CP050177.1\|WP_167033742.1\|5934104_5935457_+\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350235
NZ_CP050177.1\|WP_167033741.1\|5933700_5933871_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033733.1\|5922950_5923892_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP050177.1\|WP_167033745.1\|5938916_5939423_-\|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl\|CDD\|237976
NZ_CP050177.1\|WP_167033750.1\|5945602_5946196_+\|imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|234873
NZ_CP050177.1\|WP_167033743.1\|5937129_5937981_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP050177.1\|WP_167033738.1\|5927767_5928454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167037616.1\|5935982_5936954_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP050177.1\|WP_167037619.1\|5941374_5942976_-\|oxidoreductase	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033734.1\|5923888_5924374_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225064
NZ_CP050177.1\|WP_167033735.1\|5924498_5926085_+\|Na+/H+-antiporter	unknown	unknown	gnl\|CDD\|129911

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167033739.1\|5928542_5929883_-\|DUF2252-domain-containing-protein	gnl\|CDD\|313268	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252). This domain, found in various hypothetical bacterial proteins, has no known function.	2.26438e-139
NZ_CP050177.1\|WP_167033740.1\|5930084_5933624_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP050177.1\|WP_167033746.1\|5939497_5940238_-\|LON-peptidase-substrate-binding-domain-containing-protein	gnl\|CDD\|366967	pfam02190, LON_substr_bdg, ATP-dependent protease La (LON) substrate-binding domain. This domain has been shown to be part of the PUA superfamily. This domain represents a general protein and polypeptide interaction domain for the ATP-dependent serine peptidase, LON, Peptidase_S16, pfam05362. ATP-dependent Lon proteases are conserved in all living organisms and catalyze rapid turnover of short-lived regulatory proteins and many damaged or denatured proteins.	5.52227e-39
NZ_CP050177.1\|WP_167037616.1\|5935982_5936954_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.2232e-83
NZ_CP050177.1\|WP_167033736.1\|5926223_5926793_+\|dienelactone-hydrolase	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	3.37257e-17
NZ_CP050177.1\|WP_167033750.1\|5945602_5946196_+\|imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|234873	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB.	1.05582e-117
NZ_CP050177.1\|WP_167033742.1\|5934104_5935457_+\|NYN-domain-containing-protein	gnl\|CDD\|350235	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins. This subfamily contains Synechococcus elongatus PCC 7942 LabA which participates in cyanobacterial circadian timing, it is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system, and appears to be necessary for KaiC-dependent repression of gene expression. This subfamily belongs to the LabA-like domain family which includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Also included in the LabA-like domain family are human ZNF451, uncharacterized Bacillus subtilis YqxD, uncharacterized Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously Pseudomonas putida S16 NicB , which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	4.7307e-11
NZ_CP050177.1\|WP_167033737.1\|5926860_5927679_-\|DsbA-family-protein	gnl\|CDD\|372611	pfam13462, Thioredoxin_4, Thioredoxin.	2.63514e-38
NZ_CP050177.1\|WP_167033733.1\|5922950_5923892_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	4.65778e-104
NZ_CP050177.1\|WP_167033745.1\|5938916_5939423_-\|Cys-tRNA(Pro)-deacylase	gnl\|CDD\|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	1.54587e-75
NZ_CP050177.1\|WP_167033743.1\|5937129_5937981_+\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	1.39682e-08
NZ_CP050177.1\|WP_167033749.1\|5944463_5945606_+\|histidinol-phosphate-transaminase	gnl\|CDD\|235115	PRK03317, PRK03317, histidinol-phosphate aminotransferase; Provisional.	0
NZ_CP050177.1\|WP_167033748.1\|5943135_5944467_+\|histidinol-dehydrogenase	gnl\|CDD\|234853	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed.	0
NZ_CP050177.1\|WP_167033734.1\|5923888_5924374_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	2.96159e-20
NZ_CP050177.1\|WP_167033735.1\|5924498_5926085_+\|Na+/H+-antiporter	gnl\|CDD\|129911	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309., Na+/H+ antiporter, bacterial form. The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds].	3.71302e-76

>NZ_CP050177.1|WP_167033742.1|5934104_5935457_+|NYN-domain-containing-protein
MEHVDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRERAEADTEQPLLRIYWFDGAPDRVPQPEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADERRVLDRVWITKAVRARETGGVCPPPPVPRPEIAAILSAPLPESASASGAGAASGEAGGGEEAAAPGGAGVGAGAAGRNGSGPADHAPAADADASPAPGGRGVPTPKDLASLRAPLAPAGAAGGGVGAGAGAGAGTGAGATLRWSSDKGWVERPGGGGGGATAGEPPETASLPTLAQLTSAEQRWADREEDITTVGGDPFEVGQVFARRWMERLPEAGHVQKLSVMYPRVPHRIDGELLRYAARFGLLAHKDDQIDEHDRYAIRAGFWREIDVRATESAPPA
>NZ_CP050177.1|WP_167033741.1|5933700_5933871_-|hypothetical-protein
MAKNKNRDRNKQQAPSTEARGSEESRSSEDRSEQVQSRITPSDMPHKGKQKRFGHN
>NZ_CP050177.1|WP_167033740.1|5930084_5933624_+|DNA-polymerase-III-subunit-alpha
MTKPPFTHLHVHTQYSLLDGAARLGDMFKACGEMGMSHIAMTDHGNLHGAYDFFHQAKKAGVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANAKGLHNLFRLSSDAYAEGWLTKWPRMDKETIAQWSEGLIASTGCPSGEVQTRLRLGQFDDALKAASEYQDIFGKDRYFLELMDHGIEIERRVRDGLLEIGQKLGIPPLVTNDSHYTYANEATAHDALLCIQTGKNLSDPDRFRFDGTGYYLKSTDEMYAVDSSDAWQEGCANTLLVAQQIDTEGMFQERNLMPKFDIPEGFTEVSWFREETMRGMARRYPGGIPDDRLKQVEYEMGIIIDMGFPGYFLVVADFIMWAKNNGIAVGPGRGSAAGSIVSYAMGITDLDPIEHGLIFERFLNPERISMPDVDIDFDERRRGEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMPADVLGKGIDLNGITDPKHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAGVIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKANKGIDLDLLALPLTDPTTYELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALYRPGPMGMNSHTNYALRKNGQQEITPIHPELEEPLKEILGLTHGLIVYQEQVQKAAQIIAGYSLGEADILRRVMGKKKADELAKNFVLFQAGAKKNGYSDEAIQALWDVLVPFAGYAFNKAHSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNESQSNFAAQGDDVILFGLTAIRNVGQNVVDSIIRCRKAKGKYTSFPDFLDKVEVVVCNKRTVESLIKAGAFDEMKHTRKGLVAHHEPMIDNVVAVKRKEAEGQFDLFGGMGDEATDEPGFGLDVEFSDVEWDKSYLLAQEREMLGLYVSDHPLFGLEHVLSDKSDAAISQLTGGEHADGAVVTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRLDKREDIPRLVAMELQVPDVSSAGTDAPVVITIPTVKVTPPMISRLGEILGHHRGNSEVRIKLQGARKTTVLRLDRHRVQPDAALFGDLKVLLGPACLAG
>NZ_CP050177.1|WP_167033739.1|5928542_5929883_-|DUF2252-domain-containing-protein
MSVPRPAETADEERGEEILAVFGTAFGRLLAADPSAFKVKFRKMAASAFAFYRGTAALFYHDLEQQRSGSRASGPFLDERTGRVWIHGDLHAENFGTYMDANGRLIFNVNDFDEAYIGPFTWDLKRFAASLALIGYTKALSDEQITELVEIYAGAYRERIHALATGVKNDEVPPFTLDSAQGPLLGALRAARSLTRFALLDSMTEIREYERRFAPGGGAVELDAATRYKILAAFDGYLETLPESSLTRPDSYRVKDVVGRRGVGIGSAGLPSYNILLEGNSDALENDVVIYMKQAQVPAVSRHITDAAVREYFQHEGHRTVISQRALQAHADPWLGWTELDGAGQLVAEVSPYAVDLDWSDLDDPEEIASVVADLGRATATMHAAADDESGHSLVPFSTERAIDAAIAGDEDGFAAMLVDFAHAYGARARADHQIFVDLFRNGRLA
>NZ_CP050177.1|WP_167033738.1|5927767_5928454_-|hypothetical-protein
MDISGTQLRVLRAALFTALVVTLSVGSHVLLSRVPLPLPVVAGLSAVVFLVAYATAGRERGFWPIAALLVPLELAADTVFTSGQQFCYGQAGGPVTGSLRSVGLDVLCGGGVGGPLPGVVSPERGAAALLNSPDPVLPWLLLAVHVSIGLLATVWLRHGEAALAGLVRTAATSAFRPLLVAFASVAGTVRRTVRRGARPTGRPRPNRTHLLVHSVGRRGPPRLALSSV
>NZ_CP050177.1|WP_167033737.1|5926860_5927679_-|DsbA-family-protein
MSTRNNQANKAAARERLRQERERQAKKDRIRRQGIVAGSAVVLLAIAGGVGYAVVQGNKPSHWEAAKNATTIVAPKNTTGTNGTTVVIGKASAPKTLEVFEDSRCPICAQFEQTVGKTVQNDIDAGKFKIQYVGATFIDNSDNGTGSKNALSALGAALNVSPEAFLQYKTALYSTQFHPEETNDKFAKDSYLLQVADSVSALKNNATFQKDVKQGTFDAWAMKMSATFDKSGVQGTPTFKMDGKTLTADDGSQNPPMTVAQFDTAINAALKA
>NZ_CP050177.1|WP_167033736.1|5926223_5926793_+|dienelactone-hydrolase
MDIMLFHSMYGLRPAVHAGADRLRAAGHHVHVPDLFEGQTAGTAEEGVALKDKIGKEELLRRAILAAAPYSERGLLYAGFSLGGSIAQTLALGDEKARGLLLLHGTSDIAENAEVDDLPVQLHVADPDPFESHDWLNTWYLRMRRIGADVEIYPYQGAGHLYTDPGLPDYDESAAERTWRTALGFVDSL
>NZ_CP050177.1|WP_167033735.1|5924498_5926085_+|Na+/H+-antiporter
MDQLALLLVLLLGAVVTVPLGARLGLPPPVLMTIIGIVLALLPFVPNVDVSPDLILPLLLPPILYAAVQRTSWRQFTANKRPIFLLAVALVFVTTAAVAAVASAVVPGLPIAAALVLGALVAPPDPVAATAVAGSLGLPRRLVSILEGEGLFNDVTAIVLYHVAVAAAVSGTFSWPVAVGQFALSAVVAVVMGLALGWITNKLMSLLDDATLQVGLTLLVPFAAYVLAEEAHGSGVLAVLTVALYLAEHSADADDVMGRLAGNAFWQIVDTLVTGIAFGLIGLELHQAFGTGDGRGGVLLGWSAAVVGVVVGVRLLYLMPATWLAKRLHKLRDYDEEIPVSWRETVVMWWAGMRGVASVALALAIPLKTDSGEPFPGRDEIIFIAFAVIMATLVFQGLTLPWLVRRLGVRADTDAERELLNDLAGRAAKAARHRLREIESVEDLPDDLSERLLRVAFDLGVRISPDIVDDERREGFRRRVDRIKVVQRIQREMMSAARHEILAARSEPGADPELVDRVLRHLDVSSMR
>NZ_CP050177.1|WP_167033734.1|5923888_5924374_+|GNAT-family-N-acetyltransferase
MTTTDAGSLGHAIREATGPEDREACFAVRKEVFVLEQGVPEDIEYDGRDDDAIQVLALRDDGVPLGTGRLLYGPGAADRTGGDLSVGALGRLAVKGAARGRGLGAALVRAIEDAARERGLTAVDLHAQTHALGFYERLGYEAYGPEFLDADIPHRSMRRTL
>NZ_CP050177.1|WP_167033733.1|5922950_5923892_+|RluA-family-pseudouridine-synthase
MSLPEIRTLPVPDGLEGERVDAALARMFGFSRTKAAELAASGKVQVDGAAVGKSDRVSGGAWLEVELPEPAQPIRIVAEPVEGMEIIHDDDDIVVIVKPVGVAAHPSPGWTGTTVIGGLAAAGYRISTSGAAERQGVVHRLDVGTSGLMVVAKSERAYTLLKAQFKERVVDKRYHALVQGHPDPMSGTIDAPIGRHPNHDYKFAVTAEGKPSVTHYDLIEAFRSASLLDIKLETGRTHQIRVHMAAHRHPCVGDVTYGADPTLGKRLGLTRQWLHAVRLGFEHPSDGRWVEYASTYPADLQGALDQVRAESNA
>NZ_CP050177.1|WP_167037616.1|5935982_5936954_+|ABC-transporter-ATP-binding-protein
MCVVRDLVKTYPAARGRRGAPATPEVRATDGISLDVRRGEIFGLLGPNGAGKSTLVRQITGLMRPDSGSVELLGHDLVGHPERAARLIGYLGQESTALDELTVALAAETTGRLRGLSLRAARAERDAVLAELGLTEIAGRPLKKLSGGQRRLACFAAVLVGERPVLILDEPTTGMDPVARRAVWAAVDRRRAEHGATVVLVTHNVIEAETVLDRVAVLERGKVIACDTPAGLKEQVAGEVRVELVWRERAPLDVPEVAALRGSAQESGRRWVLRLAPDEARAAVAAVTGGEAFAALDDFTLATPSLEDVYLALGGRAKGLVKA
>NZ_CP050177.1|WP_167033743.1|5937129_5937981_+|ABC-transporter-permease
MSIVPAEAVSARGGGSVRVARENSSGTTADGTPAPLAPRARLLPSLAAVYRAQMSRARVARIPLLFVATFQSVGIMVLMRGVVNGAEESRAVVAGASVLVVAFVALNLLAQYFGHLRASGGLDHFATLPVPPAAVVLGTAAAYASFTVPGAVFTAVTGSVLFQLPLAHLWVLLLVIPPAGAALAGLGAALGLLAPRQELATLLGQLGMSAALLLGVLPANRLPEPVTWARDLLPSTYGVEALSRSFDARPDWVAVFVDLGVCAAVGVVSLAVATWAYRRAAVR
>NZ_CP050177.1|WP_167033744.1|5937964_5938693_+|ABC-transporter-permease
MRRSGEADAGRAWHDGRVTAPLTPPHQPRHDPWQTPPDGASGDSGSDSGSGSGDGSVPDDKSGTGAEVRTAVVVTVALAVAGVLLGLLWLWLSPRIPLVSDDTAVFLKDTEGEEAIGADGTFALLGLGFGAVAAAVVFLFRKRGGIAVVVGLVLGGLIGSFLAWKVGVWLGPTSDVVAHAREVGKGVTFDAPLKLNAKGALLAWPVAAMVVNLALTAVFGPRDPEPEWDWSAFGTPPGGAKP
>NZ_CP050177.1|WP_167033745.1|5938916_5939423_-|Cys-tRNA(Pro)-deacylase
MAKAKKKTQPGSGGTPATVALTAAGAPYTLHAYEHDPASASYGEEAAEALGVSPDRVFKTLVADVDGELTVAVVPVAGSLDLKALASAVGGKRASMADPAAAERTTGYVRGGISPLGQRKRLRTVLDSSAESHETICVSAGRRGLEVELSPQSLTTLTSATLSPIARP
>NZ_CP050177.1|WP_167033746.1|5939497_5940238_-|LON-peptidase-substrate-binding-domain-containing-protein
MTTARLPLFPLNAVLFPGLVLPLNVFEERYRTLMRELLKTDESEPRRFAVVAVRDGHELSPTAPGLPDQAPLPERGPTDGFGPEPLAAFHHVGCVADAATIRERPDGSFEVMATGTTRVRLLSVDASGPYLTAEVEELPEEVGEGASALAEAVLRAFRAYQKRLAGARERTLATGDDLPDEPSVVSYLIAAAAVLDTPSKQRLLETPDTAARLREELRLLRSETAVIRHLPSLPAVDLTRSPTSPN
>NZ_CP050177.1|WP_167033747.1|5940243_5941272_-|hypothetical-protein
MVGTMSLLRALIGTARMVRHTPLLAAGQPPDDAVLLDAPDERLAPVLVSAALGAYGQAAELLATTRESAEWENRDRYVRRLAAFAHSREDWLTDWLAVTPRDPDALLVKAELAVRRAWESPARAERLREMGPLIDAAADGDPRDPVPWRLALDHARGTHATHSAFEGLWAQAVRRSPHHYGCHVAALQYLSALWYGSHRECFEFAEQAARDALPGSLVQALPVRAAFTLLMSGDPTSVQGDRIDAAADLAVAVSARYEAGDPWPAEVRNLLAYVLAGRGRWAEALEQFRLVGPYATSFPWTCFTDDPLGQFLETRDGVRLQVASEMPLRARADRRRPRGHYA
>NZ_CP050177.1|WP_167037619.1|5941374_5942976_-|oxidoreductase
MTEPQEGEAPDWLSAAELGMWQAFRNGSTYDLSTYDPRRDDPFAPHGWGANRSVRARVIALLLLSGPPALPGRVAALKMRGVRITGTLTLAGGTIAPYVELDRCLFDNEIVLPESHFTTLRMVGCAIPRLEAARLHTEGDLHLPRCRVERGIRLTDAQIGTDLLISQIEVRPDRLGRAITADGMTVAQDLQADQIETYGEVSLRGAKIGVSLSLRGSRLRAPRDRRALNAPRLTVERTLHMTGAWVSDETGPAGSTPPYGVGTAGSPPPGTRVQPFECRGGVRLDDGRFGDAVDLDQARFVLMAGEELSLRRIVTPELRFKCERPEEGRVVLSGARIVTLVDVSTSWPGPGGLAMGGFVYENLVWVGHFPLSRRLEWVAAATPEYAPEPYERLAQVLRNSGEDADAREVLLVKQRRRRETLPLAAKLWGYLQDWTVAYGYRPGRAALWMAVLWAAGTIAFTRHAPPPLKATEHPDWNPALFALDLLVPVIDLGQYGYWRLEGGWQWAGAVLVLLGWILATTVAAGASRLLRRG
>NZ_CP050177.1|WP_167033748.1|5943135_5944467_+|histidinol-dehydrogenase
MISRIDLRGGALPEGSALRDLLPRAEFDVEAALEKVRPICEDVHHRGTEALIEYAEKFDGVKLTRVRVPAAALADALAGLDPAVRAALEESARRARLVHREQRRAPHTTQVVPGGTVREKWVPVGRVGLYAPGGRSVYPSSVIMNVVPAQEAGVASIALASPPQADFGGLPHPTILAACALLGVDEVYAVGGAQAVAMFAYGTTGPDGCAPADMVTGPGNIWVAAAKRYFTGRIGIDTEAGPTEIAVLADSTADPVHVAADLISQAEHDPLAAAVLVTDSAELADAVEKELEPQVAATKHVEDRVAPALAGKQSAIVLVDSVEDGLRVVDAYGAEHLEIQTADAAAVADRVRNAGAIFVGPYAPVSLGDYCAGSNHVLPTGGCACHSSGLSVQSFLRGIHIVDYTRDALAEVAHHVVTLAEAEDLPAHGAAVKARFGWKVPTA
>NZ_CP050177.1|WP_167033749.1|5944463_5945606_+|histidinol-phosphate-transaminase
MTGTSGPAREPGDLGIDDLPVRDELRGKTPYGAPQLDVPVQLNTNENPYPLPEALVERIAERVREAARGLNRYPDRDAVELRTELAAYLSRTGGHPLTTAHVWAANGSNEVIQQLLQTFGGPGRTAIGFEPSYSMHHLIARGTGTGWLSGPRGEDFTIDVTAAVAAITAHRPDVVFITSPNNPTGTAVDAETVLALYEAAQAARPSLVVVDEAYVEFSHRPSLLPLIEGRPRLVVSRTMSKAFGAAGLRLGYLAAHPAVVDAVQLVRLPYHLSAVTQATALAALEHTDTLLGYVETLKAERDRLVGELRALGYEVTDSDANFVQFGRFEDSHAAWRWILDRGVLVRDNGVPGRLRVTAGTPSENDAFLDAVRELKKEQSA
>NZ_CP050177.1|WP_167033750.1|5945602_5946196_+|imidazoleglycerol-phosphate-dehydratase-HisB
MSRIGRVERSTKETSVVVEIDLDGTGTVDVSTGVGFFDHMLDQLGRHGLFDLTVKTEGDLHIDTHHTIEDTALALGAAFKQALGDKVGVYRFGNCTVPLDESLAQVTVDLSGRPYLVHTEPENMAPMIGTYDTTMTRHILESFVAQARIALHVHVPYGRNAHHIVECQFKALARALRYASERDPRAVGILPSTKGAL

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Crispr_ID: NZ_CP050177_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_31

6109528-6109611

Orphan

Consensus_repeat	Method
GATGTCCTCAATCGCCGGACGGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_31

>merge|NZ_CP050177|31|6109528-6109611|CRISPRCasFinder
GATGTCCTCAATCGCCGGACGGGCTGGGTTGTTGCGCCCGATGTCCCGTGCGGGTCAAAGACGTCCTCAATCGCCGGACGGGCT

>NZ_CP050177|31|25|6109528-6109611|CRISPRCasFinder
GATGTCCTCAATCGCCGGACGGGCT	GGGTTGTTGCGCCCGATGTCCCGTGCGGGTCAAA
GACGTCCTCAATCGCCGGACGGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167033878.1\|6116167_6117376_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_161311713.1\|6112209_6112437_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273429
NZ_CP050177.1\|WP_167033866.1\|6103292_6103829_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225767
NZ_CP050177.1\|WP_167033867.1\|6103879_6104119_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033871.1\|6108006_6109512_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033869.1\|6105360_6106260_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP050177.1\|WP_167033880.1\|6119226_6120651_+\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP050177.1\|WP_167033879.1\|6117826_6119026_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP050177.1\|WP_167033868.1\|6104319_6105318_+\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	unknown	unknown	gnl\|CDD\|274635
NZ_CP050177.1\|WP_167037647.1\|6107142_6107709_+\|SMI1/KNR4-family-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033865.1\|6102972_6103293_+\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP050177.1\|WP_167033864.1\|6102007_6102496_+\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NZ_CP050177.1\|WP_167033872.1\|6109756_6110563_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP050177.1\|WP_167033875.1\|6113798_6114023_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167033873.1\|6110669_6112088_+\|DUF839-domain-containing-protein	unknown	unknown	gnl\|CDD\|253386
NZ_CP050177.1\|WP_167033877.1\|6115193_6116171_+\|5-dehydro-4-deoxyglucarate-dehydratase	unknown	unknown	gnl\|CDD\|235141
NZ_CP050177.1\|WP_167033874.1\|6112548_6113763_-\|TerD-family-protein	unknown	unknown	gnl\|CDD\|225192
NZ_CP050177.1\|WP_167033876.1\|6114116_6114926_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP050177.1\|WP_167033870.1\|6106388_6107084_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_161310764.1\|6102492_6102831_+\|DUF59-domain-containing-protein	unknown	unknown	gnl\|CDD\|225062

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_161311713.1\|6112209_6112437_+\|hypothetical-protein	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	8.83851e-07
NZ_CP050177.1\|WP_167033866.1\|6103292_6103829_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|225767	COG3226, COG3226, Uncharacterized protein conserved in bacteria [Function unknown].	6.64013e-28
NZ_CP050177.1\|WP_167033869.1\|6105360_6106260_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	3.41194e-122
NZ_CP050177.1\|WP_167033880.1\|6119226_6120651_+\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.42841e-124
NZ_CP050177.1\|WP_167033879.1\|6117826_6119026_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.82889e-44
NZ_CP050177.1\|WP_167033868.1\|6104319_6105318_+\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	gnl\|CDD\|274635	TIGR03535, DapD_actino, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. This enzyme is part of the diaminopimelate pathway of lysine biosynthesis. This model represents a clade of the enzyme specific to Actinobacteria. Alternate name: tetrahydrodipicolinate N-succinyltransferase.	5.8099e-177
NZ_CP050177.1\|WP_167033865.1\|6102972_6103293_+\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	8.00323e-30
NZ_CP050177.1\|WP_167033864.1\|6102007_6102496_+\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.37861e-59
NZ_CP050177.1\|WP_167033872.1\|6109756_6110563_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.01361e-63
NZ_CP050177.1\|WP_167033873.1\|6110669_6112088_+\|DUF839-domain-containing-protein	gnl\|CDD\|253386	pfam05787, DUF839, Bacterial protein of unknown function (DUF839). This family consists of several bacterial proteins of unknown function that contain a predicted beta-propeller repeats.	5.61425e-99
NZ_CP050177.1\|WP_167033877.1\|6115193_6116171_+\|5-dehydro-4-deoxyglucarate-dehydratase	gnl\|CDD\|235141	PRK03620, PRK03620, 5-dehydro-4-deoxyglucarate dehydratase; Provisional.	2.28899e-153
NZ_CP050177.1\|WP_167033874.1\|6112548_6113763_-\|TerD-family-protein	gnl\|CDD\|225192	COG2310, TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 [Signal transduction mechanisms].	1.01177e-49
NZ_CP050177.1\|WP_167033876.1\|6114116_6114926_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	9.10804e-31
NZ_CP050177.1\|WP_161310764.1\|6102492_6102831_+\|DUF59-domain-containing-protein	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	3.14635e-31

>NZ_CP050177.1|WP_167033871.1|6108006_6109512_+|hypothetical-protein
MPGDRTSLPPVRLPSDAELARDALAAPLLARAVRLARWAGPGTRVGAGGELVDEQLPAAAELLGLGDELEDGDGEAYASEAWRVAVDTGLVEVEDPDEPDEQDASDGALDADSGDGEPTGSVTAGAQLALITSGAPQDVLPLWLEALDVVFADATAPILDDLAAVIDDDGEIDFEALDWDPEAEAEFLEGVLGNLYLLTVADGGATEGPVPLPVLAASMIVPDDMGEPTDDILEQVSEAMMRLDDQFQLLEPIGLVTYTPVDEALMVEDADGAESALPVEEDDVSRYGMVRLTPLGLYGIRSRMLEAGVDAPAVGDLAGKDARALLDGIAHFPELSARAETEQWLARRAAADAARDLLAAARGTDEGAPLRRLHCQQALSLVGAEAEPAVREVLDSPELGGLARVWLAELGAADVPAPPESMIFWLAIDTIAAQLSADGEPDELQELVEGLVGQHSGFFDTAWRVEHPATAEVLEAMGRLHRDRTVSKEARKAAFRARSRS
>NZ_CP050177.1|WP_167037647.1|6107142_6107709_+|SMI1/KNR4-family-protein
MDNEHADRGELDALRAAFPAEHCLPPLGWDGVRAFERAHDIVLPEPYRTLVAEICDGCTEGPPDIDGLIPLAALPADWGPDDTQRVLAEPFPLTEAWVWEDDPRPYEEIEPLIDAVSNHGSVVLGTDGCGMYWHLVVTGPQRGRLWNISDVGAAPFGAVFGTTAATDGFAGWVGLWSTTRRPWYDVVV
>NZ_CP050177.1|WP_167033870.1|6106388_6107084_+|hypothetical-protein
MHGMTRSLRAPLLLLALTLALASAGCGTERAGAPGDDGGKLHATADPTPAPDPRPSVDRSQLEARARYMQSAIELIRVTDLPGFAVAPQSVGVLGDDGFHSVYVTPRGTTQIELAVERGTLTANTCPDTPVDGTGGRVACEKDGAAWYRVSGQLHEYARPEDGHVVRLTARRDTVDRATLRRAASAARPADDAELDALLPRNIPTAPVERGDLPPVGDGAPNNSVPEGASG
>NZ_CP050177.1|WP_167033869.1|6105360_6106260_-|4-hydroxy-tetrahydrodipicolinate-synthase
MTTPRPFGRALCAMITPFTATGALDLDGARKLAAHLVAEGCDGLVLNGTTGESPTTTDAEKTALVRVVREEVGDRAFVVAGVGSADTRHTVALAREAEQAGADGLLVVTPYYSRPPQAAVEAHFLRVADATGLPLMLYDIPGRTGTRIEPATLLALAAHPRVVAVKDCAYDLLGSSLAIARTSLAYYSGCEELNLPLYAVGGAGYVSTVAGVAPRQMRAVLDAYDSGDRAGAVRLNQLTLPLVESMMASGLPGTVTAKALLDGLGLPGGPVREPLLPAGRETADGLLATYGELLHAARP
>NZ_CP050177.1|WP_167033868.1|6104319_6105318_+|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase
MTDTPSFRSSRTTGAAAAGLATLTEDGTVLDTWFPAPELLAEPGPAGTERLTEARAVELLGEGAARAVGPDPRRGVEVVAVRTVIASLDDKPLDAHDAYLRLHLLSHRLVPPHGQNLDGLFGVLANVAWTSLGPVPVDGLEAARLNARAEGLHLQVTSVDKFPRMTDYVAPQGVRIADADRVRLGAHLATGTTVMHEGFVNFNAGTLGTSMIEGRISAGVVIGDGTDIGGGASTMGTLSGGGKERIVIGERCLIGAEAGIGIALGDECVVEAGLYVTAGTRVTLPDGQIVKARELSGASNMLFRRNSVTGTVEVRPNNAVWGGLNDVLHQHN
>NZ_CP050177.1|WP_167033867.1|6103879_6104119_+|hypothetical-protein
MSIPPSGPEITYAECRQCGTLIAGLDGRYSCGVCGWVNHHSEGHRELPRAEDDADHPAGGAEGNRLSADDNRLRGEGDS
>NZ_CP050177.1|WP_167033866.1|6103292_6103829_+|TetR-family-transcriptional-regulator
MSRRYDPDRRQRITDAALRVVGNNGIAGLSHRTVAAEADVPLGSTTYHFASLDEMLAAALRQVNEGFAAAVRDSEALADPACDMAAELARIIGVWLAGDRTGVELEFDLYLSALRRPVLRPVAAEWADAVAEILARRTDPVTARGLVALIDGICLQVLLTDAVYDPAYAREMLARLIP
>NZ_CP050177.1|WP_167033865.1|6102972_6103293_+|multidrug-efflux-SMR-transporter
MGYGLLAGAIAAEVAGTTAMKYSEGFTRLWPSLLTVAGYLIAFSLLAQTLKTLSIGTAYAIWAGTGTAAIAAIGIVFMNESAGPVKIAGLVLVIAGVVVLNLGGAH
>NZ_CP050177.1|WP_161310764.1|6102492_6102831_+|DUF59-domain-containing-protein
MSDNETVTMTPASEEEVREALYDVVDPELGIDVVNLGLIYGIHIDDANIATLDMTLTSAACPLTDVIEDQAKSATDGIVSELKINWVWMPPWGPDKITDDGREQLRALGFNV
>NZ_CP050177.1|WP_167033864.1|6102007_6102496_+|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MKLDSMYQDVILDHYKHPHGRGLRDGDAEVHHVNPTCGDEITLRVRYEGSLIADVSYEGQGCSISQASASVLNDLLVGKELAEAQKIQGTFLELMQSKGQLEPDDAMEEVLEDAVAFAGVSKYPARVKCALLSWMAWKDATAQALAAAPAAGPNDRPTKETA
>NZ_CP050177.1|WP_167033872.1|6109756_6110563_-|SDR-family-oxidoreductase
MNLPVPAPDLPGPVPDLPASGRRVLVSGASRGLGRAVARAFAANGDVVAVHHGTRAADARRTLESLPGTGHVLVGGDLSDPAEVARVADEAAEGLGGIDVLVNNAAVNERHPLPTTSYEEWTETWQRHLSVNVLATALLSHRAARDMIDRGVAGRIVNVGSRGAFRGEPDHPAYGATKAAVHAMGQSLAVSLAPYGIGVASVAPGFFETERVATRLTGPEGDTIRAQSPFGRVGRVGEVASAVVWLASPEAVWSSGTILDLNGASHLR
>NZ_CP050177.1|WP_167033873.1|6110669_6112088_+|DUF839-domain-containing-protein
MPLTRREFSGKSALTGAGLVLTGAAGALATAPGALAAEDAPEVSCGPAPRPGYGPLVPDPAGMLALPAGFSYRVLTRSGVTRLETGEFTPSDHDGTATFEGPRGTTLLVNNHELDGPRADYPYPVPLTEGLVYDPAAAGGCTVVEAHRDGRTAEWVGIAGTSTNCAGGRTPWGTWLTCEENADRAGQNGMTKDHGFVFEVDPYDRRANRDPRPVKAFGRFEHEAVVIDPRTGHAYLTEDADGPNGLLYRWVPPKGFAHGRGRLRHLADDAGVLQAPRCFDAGGRFVDDLSRATRIGTVYGVDWLEVPDRQARTVEVREQFDDGDVTRARKLEGMWWADGGAYVVSSYARDESPGRPHDGQVWFYDPRRRTLTLKVLLGVNTDPDRDGAFDGPDNITVSPYGGLILAEDGEGVQHLFGATESGVTYPIARNDLNDSEFTGVVFSPDGAVLYANIQEPGIMLAVTGPWRRSPRR
>NZ_CP050177.1|WP_161311713.1|6112209_6112437_+|hypothetical-protein
MTKSAGSRRHLPSSPFNRQGPASPPPEQFDVGDRVSHDQFGLGRVIGVEGEHAVLIDFSGRQGRILTPFSKLTKL
>NZ_CP050177.1|WP_167033874.1|6112548_6113763_-|TerD-family-protein
MTAMTPGSNIPLPTAHVAVDVTAPVRLDVSGLLLTGDGKVRSDDDFIFYNQPTGPGVSYRSGGGTAPDAIVVDTGAVPAGIEKIVVTASPDAAGQSFQGIEPTATVRNAADGSVLATFTPPQLGAETALVIVEVYLRKGAWKVRAVGQGYANGLAGIATDFGVSVEEPAAAPAAAPAAPAQAPRAADPRVAAPPAPAAPPAPPAPAPSAPGSGKINLDKGRVSLQKNQTVSLVKGGRPLLSKVKMGLGWEPAYGGKDIDLDASVIAYGPDRKHLDSCYFGRLSILNGAIKHSGDNLTGEGAGDDEVIVVDLGRLPAEATGLVFTVNSFTGQKFNEVAKAYCRLIDAATDEELVRFDLTGAEPQTGVMMAKLIKQFSGEWEMTGLGEFVKSRTVRGMVKPAAKIL
>NZ_CP050177.1|WP_167033875.1|6113798_6114023_-|hypothetical-protein
MPRPFGFTYERRGDGTVVVTHRGRAAATLRAARAEKFLAEVEQGDAQLVMARWTGAYKFGNERVARDHSRNRRR
>NZ_CP050177.1|WP_167033876.1|6114116_6114926_-|NAD(P)-dependent-oxidoreductase
MPAPRTVLLTGAAGGLGTLMRGLLPAYGYELRLFDSRPVEGEPGALTADLADKGALREAVDGVDAILHLAGISLEASFDKILKANIEGTYNLYEAARAAGIPRTVFASSNHAVGFTPRPQGDDPLIPVDTPRRPDTYYGLSKCFGEDLAQLYWDLHGMETVSVRIGSCFAEPTSVRMLSVWMSPADGARLFHAALTAEDVGHTVVYGSSANTRLWWDLSGARALGYDPRDDSEPYAAKLIAEQGELDPANPDHAHLGGHFTTHPPQWPH
>NZ_CP050177.1|WP_167033877.1|6115193_6116171_+|5-dehydro-4-deoxyglucarate-dehydratase
MTSAPLAARLTRVEGPLFFPVTAYGPDGTLDLDAFRAHVRGGVDAGAAAVFACCGTGEFHALTPDEFRDCVAAAVEETAGEVPVVAGAGYGTALAIQYARLAEEAGADGLLAMPPYLVFADQEGLLRHYTELAAATSLETIVYQRDNAVLTPETAVALAQVDGIIGLKDGFGDLDLMQRIVSTVRRELPGREFLYFNGLPTAELTGLAYRGIGITLYSSAVFAFAPDIALAFHRALNSGDDVTANRLLDGFYVPLVELRNQGRGYAVSLVKAGVRLGGLDVGEVRPPLGEPLALHVKELAALIERGRALLADIASDAAPGAGGDA
>NZ_CP050177.1|WP_167033878.1|6116167_6117376_+|hypothetical-protein
MRASAFLYPWDVVGDPDAARRIADLGVEQVTLASAYHSTRALTPRHPRHRIVTAEHAAVLYPMDEDRWAGQELRPYAAGAWAPGDAYGEAAAALADAGLDVHSWVVLAHNSRLGTERPDTSVVNAYGDRYPWAPCIARPAVAAYLVSLAAEAAVRPGAGGTELESCGWYGLAHLHAHDKIAGVGLGDAAQYLMSLCFCDVCAAGYAELGVPASVLAGVVRGALGPVWSGSASGAEGGSAAGSAAIDKLLGAELAAVTFAWRGGVARGLQESVVAAVRAAGGPGFQVLLHADPSLYRTGANVGVDPDHILGVADGVVLPCTGGGAGLLLPAFTSSPSRTASSVLAANFTVVSGMGGVPGVLGEDVEEAVGLGATGVRLYHAGLASAGDLAACVAGLSSIAGRA
>NZ_CP050177.1|WP_167033879.1|6117826_6119026_-|MFS-transporter
MRIKGDRDRGGGVLRDHDARLYLAGVVVSGFGTSAMWLAAGIWVKSLTGSDSLAALTVLAMWAPTLAGPVLGTVADRVRRRPLLIVCNLGMALLLTALLAVDSADRVWIVFAVLFVYGTAGVVMDAAENALIAGVLDQRLLGAFNGLRLTANEGMKLLAPLAGAALYARFGGGRVALLDAATFALAGCLFGLMRVREPRPSPAAGGGWRAATAEGVRRLRATPAVRPLVGAAAVTMLLAGLNGAAVYAVVDEGLGRSPAYVGVLYAVQGAGSVLVGLLAGPLLRRLPERGFAAAGVAVFAVSLGVRALPYDAAVLASAVGVGAGLPCVLIAAMTALQREVPPAELGRVSATATTLMYAPNAVGLALGAGAVALTNPTPLLATASLIALATAWHLTHHPN
>NZ_CP050177.1|WP_167033880.1|6119226_6120651_+|NCS2-family-permease
MSGEATNENGSAVDRYFKISERGSTFAREIRGGFATFFTMAYILVLNPIILGSAQDKFGAHLSGPQLVTATALVAAVMTAIMGLGGNLPLAIAAGLGLNAVVAFQLAPLMSWPDAMGLVVLEGLVICVLVVTGLREAIMNAIPQSLKQAISVGIGLFIAFIGFIDAGFVTRIPGDTGSVPVQLGASGHLAGWPVLVFCLGVLLTLALVARKVKGAILLGIVVTTLFAVVINQIADIKPAAWGLTVPSVPDDLVAAPDFGLIGHFSLFGAFQQIGVVTLVLLVFTLILSDFFDTMGTVVGVSNEAGLLDENGKVPNLGRVLLIDGVAAVAGGAASASSNTAYIESAAGVGEGARTGFASVVTGSLFGLSLFLAPLALVVPAQAAAPALIVVGFLLMSQVRHIDWEKYEIAVPAFLTIAVMPFTYSITNGIGAGFVAYVVIKTVLGKAREVHWLLWATTALFVVYFAIDPIERWIG

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Crispr_ID: NZ_CP050177_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_32

6631333-6631496

Orphan

Consensus_repeat	Method
CCGCGCGGGTCAAGGATGTCCTCAAGCGCCGGACGGGCTG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP050177_32

>merge|NZ_CP050177|32|6631333-6631496|PILER-CR
CCGCGCGGCTCAAAGATGTCCTCAATCGCCGGACGGGCTTGAGGGGGTTGCGGTCGGGTCGTGACCTTGCGGTCAAGGACGTCCTCAAGCGCCGGACGGGCTGGATGTGGCTCGGGCCCGATGACCGTGCGGGTCAAGGATGTCCTCAAGCGCCGGACGGGCTG

>NZ_CP050177|32|7|6631333-6631496|PILER-CR
CCGCGCGGCTCAAAGATGTCCTCAATCGCCGGACGGGCTT	GAGGGGGTTGCGGTCGGGTCGTGACCTTG
CGGTCAAGGACGTCCTCAAGCGCCGGACGGGCTGGATGTG	GCTCGGGCCCGATGACCGTGC
GGGTCAAGGATGTCCTCAAGCGCCGGACGGGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167034256.1\|6635581_6636169_+\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	unknown	unknown	gnl\|CDD\|235365
NZ_CP050177.1\|WP_167034249.1\|6626741_6627926_+\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
NZ_CP050177.1\|WP_167034252.1\|6629567_6630008_+\|type-II-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|235443
NZ_CP050177.1\|WP_167034244.1\|6620050_6620395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167034261.1\|6640305_6643620_+\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP050177.1\|WP_167034246.1\|6623093_6623558_+\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|335420
NZ_CP050177.1\|WP_167034251.1\|6628476_6629571_+\|3-dehydroquinate-synthase	unknown	unknown	gnl\|CDD\|234565
NZ_CP050177.1\|WP_161310969.1\|6632977_6633544_+\|elongation-factor-P	unknown	unknown	gnl\|CDD\|234788
NZ_CP050177.1\|WP_167034259.1\|6638559_6639147_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167034257.1\|6636254_6637265_+\|aspartate-carbamoyltransferase-catalytic-subunit	unknown	unknown	gnl\|CDD\|234849
NZ_CP050177.1\|WP_167034260.1\|6639143_6640313_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP050177.1\|WP_167034253.1\|6630199_6631291_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|370676
NZ_CP050177.1\|WP_167034247.1\|6623679_6625689_+\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|376862
NZ_CP050177.1\|WP_167034248.1\|6625669_6626515_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
NZ_CP050177.1\|WP_167034245.1\|6620394_6623064_+\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP050177.1\|WP_161310967.1\|6634859_6635360_-\|transcriptional-regulator-BldD	unknown	unknown	gnl\|CDD\|319351
NZ_CP050177.1\|WP_167034255.1\|6633546_6633987_+\|transcription-antitermination-factor-NusB	unknown	unknown	gnl\|CDD\|234686
NZ_CP050177.1\|WP_167034254.1\|6631814_6632924_+\|M24-family-metallopeptidase	unknown	unknown	gnl\|CDD\|238525
NZ_CP050177.1\|WP_167034258.1\|6637267_6638554_+\|dihydroorotase	unknown	unknown	gnl\|CDD\|236479
NZ_CP050177.1\|WP_167034250.1\|6627922_6628480_+\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167034256.1\|6635581_6636169_+\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	gnl\|CDD\|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	6.65254e-91
NZ_CP050177.1\|WP_167034249.1\|6626741_6627926_+\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
NZ_CP050177.1\|WP_167034252.1\|6629567_6630008_+\|type-II-3-dehydroquinate-dehydratase	gnl\|CDD\|235443	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase.	7.23121e-81
NZ_CP050177.1\|WP_161310967.1\|6634859_6635360_-\|transcriptional-regulator-BldD	gnl\|CDD\|319351	cd16837, BldD_C_like, C-terminal domain of BldD and similar transcription factors. The Streptomyces transcription factor BldD dimerizes via an unusual mechanism that inolves a tetrameric c-di-GMP assembly. BdlD is involved in controlling multicellular differentiation in sporulating actinomycetes.	5.32833e-30
NZ_CP050177.1\|WP_167034261.1\|6640305_6643620_+\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP050177.1\|WP_167034246.1\|6623093_6623558_+\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|335420	pfam03652, RuvX, Holliday junction resolvase. This family of nucleases resolves the Holliday junction intermediates in genetic recombination.	3.14259e-54
NZ_CP050177.1\|WP_167034251.1\|6628476_6629571_+\|3-dehydroquinate-synthase	gnl\|CDD\|234565	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed.	6.534e-173
NZ_CP050177.1\|WP_161310969.1\|6632977_6633544_+\|elongation-factor-P	gnl\|CDD\|234788	PRK00529, PRK00529, elongation factor P; Validated.	3.4066e-109
NZ_CP050177.1\|WP_167034257.1\|6636254_6637265_+\|aspartate-carbamoyltransferase-catalytic-subunit	gnl\|CDD\|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	4.8828e-180
NZ_CP050177.1\|WP_167034260.1\|6639143_6640313_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP050177.1\|WP_167034253.1\|6630199_6631291_+\|ATP-binding-protein	gnl\|CDD\|370676	pfam09770, PAT1, Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.	4.50878e-13
NZ_CP050177.1\|WP_167034247.1\|6623679_6625689_+\|endolytic-transglycosylase-MltG	gnl\|CDD\|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	2.92763e-88
NZ_CP050177.1\|WP_167034248.1\|6625669_6626515_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	5.38214e-82
NZ_CP050177.1\|WP_167034245.1\|6620394_6623064_+\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP050177.1\|WP_167034255.1\|6633546_6633987_+\|transcription-antitermination-factor-NusB	gnl\|CDD\|234686	PRK00202, nusB, transcription antitermination factor NusB.	2.58932e-52
NZ_CP050177.1\|WP_167034254.1\|6631814_6632924_+\|M24-family-metallopeptidase	gnl\|CDD\|238525	cd01092, APP-like, Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.	7.02594e-83
NZ_CP050177.1\|WP_167034258.1\|6637267_6638554_+\|dihydroorotase	gnl\|CDD\|236479	PRK09357, pyrC, dihydroorotase; Validated.	0
NZ_CP050177.1\|WP_167034250.1\|6627922_6628480_+\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	1.08569e-65

>NZ_CP050177.1|WP_167034253.1|6630199_6631291_+|ATP-binding-protein
MQHAVGAPLPPHQGSAHGGWARQVPPPGAQDQPPPAPGWHHPPQGPPSPPQGPAQGPPVPPRGPAQGPPVPPHGPAQGQPAPPHGPPPGPPRPPQGNPPGNPQGPPRPPQGPPHPPQGPPPHHPQYRPQPGHAPRHAPVPPPGRPSGPPSSDVTGHIQLPPGGPVPIPAPLPGDSGTGVATLAVLLIGPAGAGKTTVARHWAQSRRVPTAHISLDDVREWVCSGFADPQSGWNDHSEAQYRLARRTCGFAARNFLANGISCILDDAVFPDRPVVGLGGWKRHVGPGLLPVVLLPGLEIVLERNAERTGNRRLADEEVAGIHGRMAGWYGSGLPIIDNSKYDVETTARVLDDVLARALTSPPSW
>NZ_CP050177.1|WP_167034252.1|6629567_6630008_+|type-II-3-dehydroquinate-dehydratase
MSRPVLVLNGPNLGRLGSREPDVYGSTSYAGLVEVCQALGKELGFEVEVRETNDEGELIRWLHEAADGSIPVVLNPGAFTHYSYGMRDAAAQRTAPLIEVHLSNPYAREEFRHTSVVAAVASGTVAGFGIGSYRLALRALADELTG
>NZ_CP050177.1|WP_167034251.1|6628476_6629571_+|3-dehydroquinate-synthase
MTDQESTRIQVGGTAGHAPYEVLVGRRLLGELPALIGPQARRVAVIHPEALAETGEALRQDLADQGYEVVAVQVPNAEEAKTAEVAAYCWKALGQTGFTRTDVIIGVGGGATTDLAGFVAATWLRGVRWIALPTTVLAMVDAAVGGKTGINTAEGKNLVGAFHPPAGVLCDLAALDSLGVHDYVSGMAEIIKAGFIADPAILDLVEADPQGARTPAGPHTAELIERSIRVKAEVVSNDLKESGLREILNYGHTLAHAIEKNERYKWRHGAAVSVGMVFAAELGRLAGRLDDATADRHRAVLESVGLPLTYRADQWPKLLENMKIDKKSRGNLLRFIVLDGLAKPTVLEGPDPAVLLAAYGEVSA
>NZ_CP050177.1|WP_167034250.1|6627922_6628480_+|shikimate-kinase
MTGPVVVLVGPMGVGKSTVGELLAARLGTHYRDTDADIVAAEGRPIADIFVDDGEPRFRELEREAVRLAVAGHDGVLALGGGAVLDEATRDLLAGLPVVYLTMEVGEAIKRVGLNTARPLLAINPRQQWKQLMEARRHHYTDVARVVVATDDRTPEEVADAVLDALELKRPPGTDPRTPGKENLV
>NZ_CP050177.1|WP_167034249.1|6626741_6627926_+|chorismate-synthase
MSRLRWLTAGESHGPALVATLEGLPAGVPITTEMVADHLARRRLGYGRGARMKFERDEITFLGGVRHGLTMGSPVAIMVGNTEWPKWEQVMSADPVDPEVLAGLARNEPLTRPRPGHADLAGMQKYGVRDARPILERASARETAARVALGAVARSYLKETAGIEIVSHVVELAAAKAPYGVYPQPSDVERLDADPVRCLDADASKAMVAEIDQAHKDGDTLGGVVEVLAYGVPVGLGSHVHWDRRLDARLAAALMGIQAIKGVEVGDGFGLARVPGSQAHDEILATEDGVRRASGRSGGTEGGLTTGEPLRVRAAMKPIATVPRALATVDVVTGEAAKAHHQRSDVCAVPAAGIVAEAMVALTLADAVAEKFGGDSVPETRRNVESYLKNLVIR
>NZ_CP050177.1|WP_167034248.1|6625669_6626515_+|shikimate-dehydrogenase
MPSRATSSGSRRAAVLGSPIAHSLSPVLHRAAYDELGLTGWSYDRFEVTETGIADFLGGLDASWAGLSLTMPLKRAVIPLLDGITDTAASVEAVNTVVIGDDGRRTGDNTDIPGMIAALRERGVTSVESAAILGAGATASSALAALARVCAGPVTAYVRSEARAAEMRGWGTRLGVDVRTADWADAAGALDAPLVVATTPAGASDALAGQVPERPGTLFDVLYDPWPTALAAAWSARGGQVVGGLDLLVHQAVLQVEMMTGRGPAPLPAMRKAGEQALAAR
>NZ_CP050177.1|WP_167034247.1|6623679_6625689_+|endolytic-transglycosylase-MltG
MTDYGRGPGSEPWHPEDPLYGDQGWGAQQAADGQGAPYGEQPQQQYPQQQYDAGQPGQDPYQQQQQYQQQPYDGGQHYDGQQQYADPQQQYADPQHYQQHPQQYQDPQQYQQQPQGYGEQQLPHQQQYNGGTGGWDPHQQQAAMAYGGNPADPYAVQHAGGYPEGQDYYGTPDAYPPPQPPGRRPGEMGPPQGQGQQQLHQQPLQQQPIQQQHQQPHQPQQHQPPQQHQPQPQQPQVPAPAAPAAPENEWDAEQPPETHPFFTGDDDGSDDRKPRDSRNDDGDDGYGDDDEDEGDDGRDGRDRRGKSSKKKKGGNGRACLVLAVVLVGGVGGVGYFGYTFYQDRFGPPPDFAGAGTTAVDVEIPPDSGGYAIAAILVKKGVIKSEGAFVEAQKKNPKGTLIQAGVFTLRKGMSGDNAVKAMLDPNSHNSLVIPEGTRNAKIYKLIDKQLGVDDGTTADVAKKQINSLGLPDWAKGHKNVKDPLEGFLFPASYPVAKGMTPESVLKKMVSRANAEYGKLDLEANAKKFKVDGPWQMITVASLVQAEGKTQDDFRKMAEVVYNRLKPTNIQTNQKLQFDSSFNYLQGESNINISESEINSNQDPYNTYTQRGLPPGPISNPGNEALAAALDPTSDGWMYFVATDGVHKTEFAKTYAEFQRLKDKFNAKQGN
>NZ_CP050177.1|WP_167034246.1|6623093_6623558_+|Holliday-junction-resolvase-RuvX
MRRGRRLAIDVGDARIGVASCDPDGIIATPVETVPGRDVPAAHRRLRQLVEEYEPIEVVIGLPRSLNGGEGPAAVKVRTFAQEVARGIAPVPVRLVDERMSTVTASQGLRASGVKSKKGRSVIDQVAAVVILQSALEAERGSGEAPGEGVEVVI
>NZ_CP050177.1|WP_167034245.1|6620394_6623064_+|alanine--tRNA-ligase
MESAEIRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPYPRATSVQKCVRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAVKLAWELLTSSLADGGFGLDPERLWVTVYEDDDEAERIWRDVVGFPAERIQRLGKAENYWSMGVPGPCGPCSEIMYDRGPDFGVEGGPAVNDERYVEIWNLVFMQYERGEGTGKADFEILGDLPSQNIDTGLGLERLAMILQGVQNMYETDTLRVVMDKATELTGVRYGADHGSDVSLRVVADHMRTSAMLIGDGVTPGNEGRGYVLRRIMRRAIRNMRLLGATQPVVADLIDVVIRTMGRQYPELETDRKRIETVALAEEAAFLKALKGGTNILDTAVTETKAAGGQVLSGDRAFLLHDTWGFPIDLTLEMAAEQGLSVDEDGFRRLMKEQRDRAKADAKAKKSGHADLSAYRAVADNSGSTEFTGYTSTENESVIVGLLVDGVSSPAATEGDEVEVVLDRTPFYAEGGGQLADQGRIRLDTGAVIQVRDVQQPVPGVSVHKGVVQVGEVTVGAPVQAAIDLNRRRAIARAHSATHLTHQALRDALGPTAAQAGSENSPGRFRFDFGSPAAVPGTVLTDVEQKINEVLSRELDVQAEVMSIDEAKKQGAIAEFGEKYGERVRVVTIGDFSKELCGGTHVKNTAQLGLVKLLGESSIGSGVRRIEALVGVDAYNFLAKEHTVVAQLQELVKGRSEELPEKISGMLSKLRDAEKEIEKFRAEKVLAAAAGLVDSAKDVRGTALVTGQVPDGTSADDLRKLVLDVRGRMPGDRPTVVALFTVSGGRPVTVIATNEAARERGLKAGELVRAAAKTLGGGGGGKPDVAQGGGQNPEAVGDAVAAVERLVAETA
>NZ_CP050177.1|WP_167034244.1|6620050_6620395_+|hypothetical-protein
MFRRTFWFTAGAAAGVWATTKVNRKLRQLTPESLAAQAANKAIDAGHKLKDFALDVRTGMVRREAELGEALGLEAPADPALPAPRRLAAIEYTERPRTGTTRHTPNPHNRNEDH
>NZ_CP050177.1|WP_167034254.1|6631814_6632924_+|M24-family-metallopeptidase
MSQVYAARRARLRDRCSAAGDAAALISRPANVRYLAGGAPPGAVLLLGPDEDVLLCPRTPVPESTAGHVDDELRLTVLPAGHGGDPAVAAAGVLARAGADSLAVEEHHLTVARHRALGSAAPGLRLADLGAAVEHQRIVKDEEEIACLRIAAEIADHALGELLESILVGRTERHLALELERRLVDHGADGPAFPTAVATGPHSGRPDHRPSDRRVEEGDFLSVTLGADYRGYRCLIGRTFVIGTSPADWQIDLYELVFGAQRAGREVLVPGKGYRDVDRAARQPLEAAGHSEGLAPRTGHGVGLEIDEDPQIAPATMGKLDACVPVTVGPGVHLPGRGGVRIDDTLVVRPEADGGPELLTITTKELLAL
>NZ_CP050177.1|WP_161310969.1|6632977_6633544_+|elongation-factor-P
MASTNDLKNGLVLKLDGGQLWSVVEFQHVKPGKGPAFVRTKLKNVLSGKVVDKTFNAGVKVETATVDRRDMQFSYMDGEYYVFMDMDTYDQLMVDRKSVGNAANYLIEGFTASVAQHEGEVLYVELPAAVELVIQHTDPGLQGDRSTGGTKPATLETGYEIGVPLFITTGEKIKVDTRTGDYLGRVNS
>NZ_CP050177.1|WP_167034255.1|6633546_6633987_+|transcription-antitermination-factor-NusB
MAARNKARKRAFQILFEADQRGAPVQTVLADWIRHARTDERQPPVGEYTMELVEGYAEYADRIDDLISTYAVGWTLDRMPVVDRNIVRLAAYELVWVDDTPDAVVIDEAVQLAKEFSTDDSPSFVNGLLGRFKELKPSLRRVVDTP
>NZ_CP050177.1|WP_161310967.1|6634859_6635360_-|transcriptional-regulator-BldD
MSSEYAKQLGAKLRAIRTQQGLSLHGVEEKSQGRWKAVVVGSYERGDRAVTVQRLAELADFYGVPVQELLPGTTPGGAAEPPPKLVLQLERLAHVPQEKAGPLQRYAATIQSQRGDYNGKVLSIRQDDLRTLAVIYDQSPSVLTEQLISWGVLDADARRAVAHDEG
>NZ_CP050177.1|WP_167034256.1|6635581_6636169_+|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR
MDSQNPAHSSEAARPVLEAPDIARVLTRIAHEIVERARGAEDVVLLGIPTRGVYLARRLADRLAEITGRTIPVGSLDITMYRDDLRMRPARALGRTDIPADGVDGRLVVLVDDVLFSGRTIRAALDALGDIGRPRAVQLAVLVDRGHRELPIRADYVGKNLPTSLRETVKVQLAEEDGRDTVLLGLRRPATSGER
>NZ_CP050177.1|WP_167034257.1|6636254_6637265_+|aspartate-carbamoyltransferase-catalytic-subunit
MLRLPGTSPRTPGHLISAADLTRDEAVNILDTAEEMARVADRPIKKLPTLRGRTVVNLFFEDSTRTRISFEAAAKRLSADVINFSAKGSSVSKGESLKDTALTLEAMGADAVVIRHGASGAPYRLATSGWIEGVVVNAGDGTHEHPTQALLDAFTLRRRLVGADQGIGRDLEGRRVTIVGDVLHSRVARSNILLLHTLGAQVTVVAPPTLVPIGVEQWPCEVSYDLDKVLPASDAVMMLRVQRERMNAAFFPTEREYSRRYGLNGDRMARMPGHSVVMHPGPMNRGMEITAEVADSDRCTAVEQVANGVSIRMAVLYLLLGGNEPAVSHARTEENK
>NZ_CP050177.1|WP_167034258.1|6637267_6638554_+|dihydroorotase
MTKILVRGARVLGGAARDVLIDGETIAEVGAGLDADGATVIEADGLVLLPGLVDLHTHLREPGREDSETVLTGTRAAAIGGFTAVHAMANTFPVADTAGVVEQVWRLGRESGYCDVQPIGAVTVGLEGKQLAELGAMHDSAAGVRVFSDDGKCVDDAVIMRRALEYVKAFDGVVAQHAQEPRLTEGAQMNEGVVSAELGLGGWPAVAEESIIARDVLLAAHVGSRLHICHLSTAGSVELVRWAKSKGWNVTAEVTPHHLLLTDELVRSYNPVYKVNPPLRTEADVLALREALADGTIDCVATDHAPHPHEDKDCEWAAAAMGMVGLETALSVVQQTMVDTGLLDWAGVADRMSFRPARIGRLDGHGRPVSAGEPANLTLVDPAYRGVVDPAGFASRSRNTPYEGRELPGRVTHTFLRGRATVVDGNLA
>NZ_CP050177.1|WP_167034259.1|6638559_6639147_+|hypothetical-protein
MTTANLLTTLAAEQKSADVTDWAARIGWVVGLLFFVVLVYWLMRQGWKWRGSLQSDVPDLPTAPETPGEPRLTLTGRYHGSTTAGQWLDRIVAHGLGTRSRVELTLTDAGLDVVRPGATDFFVPADRLREARLDKGIAGKVLAEGGLLIVTWQHGDRLIDSGFRSDRSAEQAEWVDAINAMTPATTSLTTTEGAS
>NZ_CP050177.1|WP_167034260.1|6639143_6640313_+|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MTTSPRGSARDKASPAVLVLEDGRSFRGRAYGAVGETFGEAVFSTGMTGYQETLTDPSYHRQVVVMTAPHVGNTGINDEDQESRRIWVSGYVVRDPARIPSNWRSRRSLDDELTAQGVVGISGIDTRALTRHLRERGAMRVGIFSGDALDSASGKGAADGAALLARVLRAPEMTGAELSSEVTTAEPYVVPAIGTKRFTVAALDLGIKGMTPHRLAERGIEVHVLPASATLDDVYATTPDGVFLSNGPGDPATADLTVVKGVLERGTPLFGICFGNQLLGRALGFGTYKLKYGHRGINQPVQDRTTGKVEVTAHNHGFAVDAPLDRVSETPYGRAEVTHVCLNDNVVEGLRLLDRPVFSVQYHPEAAAGPHDAAYLFDRFTSLMEDQRA
>NZ_CP050177.1|WP_167034261.1|6640305_6643620_+|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIQSVLVIGSGPIVIGQAAEFDYSGTQACRVLKSEGLRVILVNSNPATIMTDPEIADATYVEPITPEFVEKIIAKERPDALLPTLGGQTALNTAISMHEQGVLEKYGVELIGANVEAINKGEDRELFKGVVEAVRAKIGHGESARSVICHTMDDVLGGVETLGGYPVVVRPSFTMGGAGSGFAHDEEELRRIAGQGLMLSPTTEVLLEESILGWKEYELELMRDKKDNVVVVCSIENFDPMGVHTGDSITVAPAMTLTDREYQTLRDVGIAIIREVGVDTGGCNIQFAVNPDDGRIIVIEMNPRVSRSSALASKATGFPIAKIAARLAVGYTLDEIPNDITEKTPASFEPTLDYVVVKVPRFAFEKFPLADATLTTTMKSVGEAMAIGRNFTEALQKALRSLEKAGSQFDFTGAPGDKDALLETAKVPTDGRINTVMRAIRAGATQEEVFDATRIDPWFVDQLFLIKEYADELADADRLFPELLAEVKRHGFSDAQIGAIRGLREDVVREVRHSLGVRPVYKTVDTCAAEFAAKTPYFYSSYDEESEVAPREKPAVIILGSGPNRIGQGIEFDYSCVHASFALSDAGYETVMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHAESLAGPIAGVVVQLGGQTPLGLAQALKDNGVPVVGTPPEAIHAAEDRGAFGRVLAEAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVLGGRGMEIVYDETRLSSYIAESTEISPTRPVLVDRFLDDAIEIDVDALYDGTELYLGGVMEHIEEAGIHSGDSACALPPITLGGYDIKRLRTSTEAIAKGVGVRGLINIQFALAGDILYVLEANPRASRTVPFTSKATAVPLAKAAARISLGATIAGLREEGLLPAHGDGGTLPLDGPISVKEAVMPWSRFRDVHGRGVDTVLGPEMRSTGEVMGIDSAFGTAYAKSQAGAYGPLPTKGRAFISVANRDKRSMIFPARELVAHGFELLATSGTAEVLKRNGIKARVVRKQFEGEGPNGEQTIVQLIHAGEVDLIVNTPYGTGGRLDGYDIRTAAVARGVPCLTTVQALAAAVQGIDALTQGDIGVRSLQEHARNLIAAREDQ

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Crispr_ID: NZ_CP050177_33

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_33

6657782-6657875

Orphan

Consensus_repeat	Method
GTGTCCTCAATCGCCGGACGGGCTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_33

>merge|NZ_CP050177|33|6657782-6657875|CRISPRCasFinder
GTGTCCTCAATCGCCGGACGGGCTTGAAGTGTCCGCCGGCCGGGGGATGGGTGCGGGCCGGGGGTGGGGTGTCCTCAATCGCCGGACGGGCTTG

>NZ_CP050177|33|26|6657782-6657875|CRISPRCasFinder
GTGTCCTCAATCGCCGGACGGGCTTG	AAGTGTCCGCCGGCCGGGGGATGGGTGCGGGCCGGGGGTGGG
GTGTCCTCAATCGCCGGACGGGCTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167034271.1\|6658743_6659688_+\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|234567
NZ_CP050177.1\|WP_161310958.1\|6646358_6646922_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_CP050177.1\|WP_167034273.1\|6661383_6662067_+\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|235515
NZ_CP050177.1\|WP_161309538.1\|6666186_6666669_+\|AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP050177.1\|WP_167034267.1\|6653262_6654039_-\|toll/interleukin-1-receptor-domain-containing-protein	unknown	unknown	gnl\|CDD\|379328
NZ_CP050177.1\|WP_167034265.1\|6650173_6651268_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_023542989.1\|6647001_6647274_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|234744
NZ_CP050177.1\|WP_167034275.1\|6666821_6667619_+\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143600
NZ_CP050177.1\|WP_167034272.1\|6659721_6661155_+\|rRNA-cytosine-C5-methyltransferase	unknown	unknown	gnl\|CDD\|237857
NZ_CP050177.1\|WP_167034264.1\|6648902_6650111_+\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
NZ_CP050177.1\|WP_167037770.1\|6665111_6665969_+\|RNA-polymerase-sigma-factor-SigF	unknown	unknown	gnl\|CDD\|274373
NZ_CP050177.1\|WP_066954827.1\|6645996_6646320_+\|integration-host-factor	unknown	unknown	gnl\|CDD\|223177
NZ_CP050177.1\|WP_167034269.1\|6655564_6657715_+\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|237844
NZ_CP050177.1\|WP_167034276.1\|6667675_6669382_+\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|366721
NZ_CP050177.1\|WP_167037768.1\|6662265_6663282_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|367868
NZ_CP050177.1\|WP_167034268.1\|6654031_6655363_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP050177.1\|WP_167034266.1\|6651307_6653266_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167034270.1\|6657907_6658459_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP050177.1\|WP_167034263.1\|6647373_6648612_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl\|CDD\|235513
NZ_CP050177.1\|WP_167034274.1\|6663527_6664970_+\|GuaB1-family-IMP-dehydrogenase-related-protein	unknown	unknown	gnl\|CDD\|181127

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167034271.1\|6658743_6659688_+\|methionyl-tRNA-formyltransferase	gnl\|CDD\|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	1.03425e-162
NZ_CP050177.1\|WP_161310958.1\|6646358_6646922_+\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	1.93793e-103
NZ_CP050177.1\|WP_167034273.1\|6661383_6662067_+\|ribulose-phosphate-3-epimerase	gnl\|CDD\|235515	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated.	6.81689e-135
NZ_CP050177.1\|WP_161309538.1\|6666186_6666669_+\|AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	4.92727e-32
NZ_CP050177.1\|WP_167034267.1\|6653262_6654039_-\|toll/interleukin-1-receptor-domain-containing-protein	gnl\|CDD\|379328	pfam13676, TIR_2, TIR domain. This is a family of bacterial Toll-like receptors.	4.02843e-07
NZ_CP050177.1\|WP_023542989.1\|6647001_6647274_+\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	1.23162e-18
NZ_CP050177.1\|WP_167034275.1\|6666821_6667619_+\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143600	cd07576, R-amidase_like, Pseudomonas sp. MCI3434 R-amidase and related proteins (putative class 13 nitrilases). Pseudomonas sp. MCI3434 R-amidase hydrolyzes (R,S)-piperazine-2-tert-butylcarboxamide to form (R)-piperazine-2-carboxylic acid. It does so with strict R-stereoselectively. Its preferred substrates are carboxamide compounds which have the amino or imino group connected to their beta- or gamma-carbon. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group. It has been suggested that this subgroup represents a new class. Members of the nitrilase superfamily generally form homomeric complexes, the basic building block of which is a homodimer. Native R-amidase however appears to be a monomer.	4.94433e-129
NZ_CP050177.1\|WP_167034272.1\|6659721_6661155_+\|rRNA-cytosine-C5-methyltransferase	gnl\|CDD\|237857	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB.	2.45085e-92
NZ_CP050177.1\|WP_167034264.1\|6648902_6650111_+\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP050177.1\|WP_167037770.1\|6665111_6665969_+\|RNA-polymerase-sigma-factor-SigF	gnl\|CDD\|274373	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily. This group of similar sigma-70 factors includes clades found in Bacilli (including the sporulation factors SigF:TIGR02885 and SigG:TIGR02850 as well as SigB:TIGR02941), and the high GC gram positive bacteria (Actinobacteria) where a variable number of them are found depending on the lineage.	6.95639e-108
NZ_CP050177.1\|WP_066954827.1\|6645996_6646320_+\|integration-host-factor	gnl\|CDD\|223177	COG0099, RpsM, Ribosomal protein S13 [Translation, ribosomal structure and biogenesis].	1.46032e-05
NZ_CP050177.1\|WP_167034269.1\|6655564_6657715_+\|primosomal-protein-N'	gnl\|CDD\|237844	PRK14873, PRK14873, primosomal protein N'.	0
NZ_CP050177.1\|WP_167034276.1\|6667675_6669382_+\|NAD(P)-binding-protein	gnl\|CDD\|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	3.01389e-48
NZ_CP050177.1\|WP_167037768.1\|6662265_6663282_+\|transcriptional-regulator	gnl\|CDD\|367868	pfam04198, Sugar-bind, Putative sugar-binding domain. This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. These proteins have an amino-terminal helix-turn-helix pfam00325 that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.	3.76937e-73
NZ_CP050177.1\|WP_167034268.1\|6654031_6655363_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	9.11213e-06
NZ_CP050177.1\|WP_167034270.1\|6657907_6658459_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00321294
NZ_CP050177.1\|WP_167034263.1\|6647373_6648612_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl\|CDD\|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	0
NZ_CP050177.1\|WP_167034274.1\|6663527_6664970_+\|GuaB1-family-IMP-dehydrogenase-related-protein	gnl\|CDD\|181127	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein.	0

>NZ_CP050177.1|WP_167034269.1|6655564_6657715_+|primosomal-protein-N'
MSSDDRQSEGSGEGGGPEQLAFIRETVRKAKVPRAKPRTWRGAALAAELPVARVVVNKGVLHLDQFFDYAVPEELDRDAQPGVRVRVRFGAGAHQVRGGRREGGRLIDGFVVERRAESDYSGPLAALAGVVSPEPVLGAELLGLARAVADRYAGSLADVLQLAVPPRNARAESKPSPEPLPPPAAPGPGTWERYGKGAAFLDALAGGGAPRAVWTALPGPHWADELARAVAATLASGRGALVVVPDGRVAGRVDAALTDLLGAGRHALLTAEAGPEKRYREWLAVRRGAVRAVVGTRAAMFAPVRNLGLVALWDDGDGSHSEQHAPQPHAREVLLLRAAHDKCGFLLGSTSCTVEAAQLVETGWALPLAADREQVRVAAPLVRTVGDGELARDEAARAARLPSLAWQAVREGLKSGPVLVQVPRRGYVPRLACERCRTPARCRHCAGPLEAPEQRELHCTWCGRGESAWRCVECGSTRLRAQIVGARRTAEELGRAFPAVPVRTSGRDHVLDSVPGRPALVVSTPGAEPVAEGGGYAAALLLDGWAMLGRPDLRAAEEALRRWTQASSLVRGQGEGGTVVIVAEPTQRPVQALVRWDPVGHAQRELAERAELGFPPVSRMAAVTGRAETVGAFLGSAALPPDVEVLGPVPLPVAEPGRPRRPGDPPPGEVWERVLLRVPPGSGAALAGALKAAQAGRMARGGESAVRVRIDPPDIG
>NZ_CP050177.1|WP_167034268.1|6654031_6655363_-|helix-turn-helix-domain-containing-protein
MTEVAVLEQSHDFGCELRRRRTEALLSLEELGRLVHYSKGQLSKVERGLKRPTPELARLCDTQLRAGGALSALVPRQEADRPLPDSGYDGEVWLMRLDQDGSSSFQPVRRRSVIAAGAASVLTMHVEAAGTPDPSGAGADTVVDASRLLFDQFRRIGQASGPAGVLPPLIAQTHALEQLAMRSGSRTRAALLVLASRYAEYTGWMAQELGDDRSALWWTDRAVQLARAGDDPALVAYSWVRRSLLCLYRGQLRESVELSERALNSDAPPRVRGLAAQHLAQGLAAEGSHDACTRSLEQARGLLDRGLSDPVAPVLGASHLPDVVAMFTGWCLYELGRPDEAAQVLDREHARIPEHAMRTRARYGVRRALAHAAAGEIDHACHLTREVLPSVRLTHSATIAADLRRLVHTLGRHPRQASVREIGPELSAALALHSPAPRGHSHA
>NZ_CP050177.1|WP_167034267.1|6653262_6654039_-|toll/interleukin-1-receptor-domain-containing-protein
MHEIFINYRTEGGKGFASLCERHLSERFGEGSAFLAQKSIGPGNNFVDALVHGVRRSRVLLALVDEHWLDAPDHRRSGRRALSDPKNWVRREIEEAFASGVLVVPLLLGRRAEQLDAHRLPKSLAPLAECQYERLSNRSAEADLIRLGDRLVQQVPELAALDRRPAAKTQPSPEPDTQLGVRNDHQSGGIGQVGGSVGTFVNESHGPLHSGNGDLVHGGDVVRGPKIVGDGTNHVTGGNRGGIHQRFGPRTGRKDDER
>NZ_CP050177.1|WP_167034266.1|6651307_6653266_-|hypothetical-protein
MTSAYRTFVDNAYGSFHGGDGTQVNNHYYEWEATSARLREEFRSRPRTIAEGDRAWLYRRFIEPTRFQQARRVLRDHHMALLSATPGSGLRAAALMLLHELPSSEGGFHELPDTVDDEDSSSQLDRAVLGEGDRLVLDLSGAEESRYLDVQGQFSDFRHRLAQARSHLVVIVPQRLGYILRSELRPLTTDLVRPSPRLVLARHLRCEGIQPTAAEMESADLVTHLATAPLRDVSDLASRIVKARDDGGSERGFPHWLREALVEVTDRSEQVAKQLTDCPAGSRRALLLALAMFHESTPTVVHAAATALMKILKQPSDDRPRLDHNDLHAEFKAIGATTQASGGVRFDDIGYDRAVRDHFWTYFPDIRRQLRDWVGDHVAGPELTQKERGQVVSRISGQCLRTGRPEDLVHLTERWAGPTGHGRLSPDAAQILGHGLADDRYGRTFRQQVYDWSTTRDLDPKLQQLLVQVCSEHMARTYPDQAMVRLHHLARRMRSPRPVTRALFRLVEADDRLYRRLLERLSAGAAKGRWRADVTLFLALADPTRLIPSPNVRAALTTGWGGAIRQHPVDVWRSDMHRWLMVCRDTRFRGPVLDVLTSACGRERGALGNVYGVARRWARSHGDDSLVRSETAACLLRKINAAQGFVPFDSSA
>NZ_CP050177.1|WP_167034265.1|6650173_6651268_-|hypothetical-protein
MTAFLTIILGLLVVIVGLVVAWPWWVWPASLVLLLLFGAVTQKVLTREPDGFPLEYSLEPDFPTPVVHRQEHRVTYVALPSSVPDYDFSFSATVRWVLLDAPDDAPHINPGGLAVDAVLRRAREVTVRQPPTRSALVQHQLDGCLGIMEADPTGRVLAMAQDVTLNLPDPDRERLTKLSNVRKDEDLWEHERNYERNKRAYLGEDVLKDPGSAVVWWLAKNDDQVEGTVDRIGLLASLSAAANNGPVHPEFQHLVDPPTVGPGGDEPLTSVGGLADPFEAGSADGPGPAEPLGPESLDGLLEWLGFDESDPDLLLFAVRLAELVEAHEKPEAAEAIRQHFEPAEPDEPDQPDKPDQATEDNPPA
>NZ_CP050177.1|WP_167034264.1|6648902_6650111_+|methionine-adenosyltransferase
MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGQVHVAGEVTTKAYAPIAQLVRDKILDIGYDSSKKGFDGASCGVSVSIGAQSPDIAQGVDTAYEKRVEGDEDELDKQGAGDQGLMFGYACDETPELMPLPIHLAHRLSRRLSEVRKNGTIPYLRPDGKTQVTIEYDGDKAVRLDTVVVSSQHASDIDLDSLLAPDVREFVVEHVLNQLVEDGIKLDTEGYRLLVNPTGRFEIGGPMGDAGLTGRKIIIDTYGGMARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLASRCEVQVAYAIGKAEPVGLFVETFGTHTVDPEKIEQAIAHVFDLRPAAIIRDLDLLRPIYAQTAAYGHFGRELPEFTWERTDRVDALREAAGL
>NZ_CP050177.1|WP_167034263.1|6647373_6648612_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MDGRPKVVLGVTGGIAAYKACELLRRLTESGHDVRVVPTEAALHFVGAATWSALSGHPVSTEVWNDVHEVPHVRIGQSADLVVVAPATADLLAKAAHGLADDLLTNTLLTARCPVVFAPAMHTEMWEHPATRENVATLRRRGAVVVEPAVGRLTGADTGKGRLPDPGEIFEVCRRVLARGVSAPDLAGRHVVVSAGGTREPLDPVRYLGNRSSGKQGYALARTAAARGARVTLIEANTGITDPAGVDVVHVGTAVQLREAVLKAAADADAVVMAAAVADFRPAAYATGKIKKKDGEEPAPVALVRNPDILAEIAGERPRPGQVVVGFAAETDDVLANGRLKLARKGCDLLVVNEVGERKTFGAEENEAVVLAADGGETPVPYGPKEALADVVWDLVVPRLGPAGLDPGSRNA
>NZ_CP050177.1|WP_023542989.1|6647001_6647274_+|DNA-directed-RNA-polymerase-subunit-omega
MSSSISTPEGIINPPIDELLEATDSKYSLVIYAAKRARQINAYYSQLGEGLLEYVGPLVDTHVHEKPLSIALREINAGLLTSEAIDGPAQ
>NZ_CP050177.1|WP_161310958.1|6646358_6646922_+|guanylate-kinase
MAAEVRPRLTVLSGPSGVGKSTVVAHMRKVHPEVWLSVSATTRKPRPGERHGVQYFFVSDEEFDKLVANGELLEWAEFAGNRYGTPRRAVLDRLESGDPVLLEIDLQGARQVKESMPDSQLVFLAPPSWDELVRRLTGRGTESAPVIERRLAAARIELAAESEFDTTLVNTSVEDVARELLALMAVA
>NZ_CP050177.1|WP_066954827.1|6645996_6646320_+|integration-host-factor
MALPPLTPEQRAAALEKAAAARRERAEVKNRLKHSGASLHDVIKQGQENDVIGKMKVSALLESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLEREFGGSGA
>NZ_CP050177.1|WP_167034270.1|6657907_6658459_-|hypothetical-protein
MADHTTHDAQARASLHLLVRDIERVRRQVDALRTLTAQLGNVYRPRRSGPSTGFVVYGRAPAPTVRLAQELRDSVETLVTAAVDFDRSLGFSWDAVGSALGVTKQAVHRRYGARRTTPQPGAAEADHAQDPAAPPQPRPSLPAVPGPLPAVPAARSMPPQPTASTQSLREETRPTAFPGPRGG
>NZ_CP050177.1|WP_167034271.1|6658743_6659688_+|methionyl-tRNA-formyltransferase
MKLVFAGTPEVAVPALDALLASGRHEVAAVVTRPDAPAGRGRRLVASPVAERAEEAGIEVLKPAKPRDEDFLARLREIAPDCCPVVAYGALLPRVALDIPAHGWVNLHFSLLPAWRGAAPVQHAVMAGDEMTGAATFQIEEGLDSGPVYGVITEAVRPTDTSGDLLTRLAFAGSGLLAATMDGIEDGTLKPRPQPADGITLAPKLSVEDARVDWGAPALRVDRVVRACTPAPGAWTVFRGERLKLIQIGLFPGRTELASGELAVGKNAVHVGTGSHDVELLWVQPQGKKPMRAADWARGVRIAPGERLGAADVG
>NZ_CP050177.1|WP_167034272.1|6659721_6661155_+|rRNA-cytosine-C5-methyltransferase
MNEQARRRPATPYRRPKKDPVRMLAFEALRAVDERDAYANLVLPPLLKKARENKEFETRDAALATELVYGTLRRQGTYDAIISACIDRPLREVDPPVLDVLALGAHQLLGTRIPTHAAVSASVELARVVLGDGRARFVNAVLRKISQHDLDSWLQQVAPSYDQDPEDHLAVVHSHPRWVVSALWDALGGGRAGIEDLLEADNERPEVTLVARPGRSTTAELVAAVGEDSALPGRWSPYAVRLAEGGEPGALDAVREGRAGVQDEGSQLVAAAVANAPLDGADARWLDGCAGPGGKAALMAALAAERGALLLAAEKQPHRARLVARALAGNPGPYQVITADGTRPPWVPGSFDRVLVDVPCSGLGALRRRPESRWRRRPEDLEGFAPLQRGLLREALGAVRIGGIVGYATCSPHLAETRIVVEDVLGGRGGPAVAAEWVDARPLMPGVPALGDGPDVQLWPHLHGTDAMYLALLRRTA
>NZ_CP050177.1|WP_167034273.1|6661383_6662067_+|ribulose-phosphate-3-epimerase
MAQINPSILSADFSRLAEEAKAVEGADWLHVDVMDNHFVPNLTLGVPVVEALGRATDTPLDCHLMIEDPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPIEPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRQLIAKHGLELWLQVDGGVSATTIERCAEAGADVFVAGSAVYGTDDPAAAVRMLRNQATEATAAAPWACAH
>NZ_CP050177.1|WP_167037768.1|6662265_6663282_+|transcriptional-regulator
MSAGRPALRMGPAELVQAAAMARRFYLEGKSKIQIAEEFGVSRFKVARVLETALERDLVRIEIRVPAELDAERSDALRARYGLRHAVVVESPADAADESPDPENLGEVAADLLGELVAEGDVLGLAWGRSTIHMAAALDRLPPCTVVQLTGVYDAGTAERGSVEAVRRAAQVSGGEAHPIYAPMLLPDPATAAALRSQPGIARAFEYFDKVTVAAVSIGSWEAGISTVHDMLSDEERSHYASLGVAAEMSAHLFDSEGRRVGRDLGERCITVEADRLRRIPEVVAIAGGLRKAEAIGAVLRSGLVTSLVTDTAAADFLLTEFAPAPRPALERSDPDGD
>NZ_CP050177.1|WP_167034274.1|6663527_6664970_+|GuaB1-family-IMP-dehydrogenase-related-protein
MRFLNGQTPSYDLTYDDVFMVPGRSAVASRQDVDLAAPDGTGTTIPLVVANMTAIAGRRMAETVARRGGLVVIPQDIPIEVVAEVVSWVKTRHLVLDTPIVLSPSQTVGDALSLLPKRAHGAGVVVDADHRPVGIVTEHDLTGVDRFTQLSEVMSKDVLAIAADMDPREAFNALDGANRKLAPAVDADGRLAGILTRKGALRATLYTPAVDAAGKLRIAAAVGINGDVAGKARQLLDAGVDTLVVDTAHGHQESMLAAVRAVRALDPDVPVVAGNVVSADGVRDLIEAGADIVKVGVGPGAMCTTRMMTGVGRPQFSAVLECAAEARKHGKHVWADGGVRHPRDVAMALAAGASNVMIGSWFAGTYESPGDLQEASDGRLYKESFGMASARAVRNRTSEESAYDRARKAVFEEGISTSRMFLDPGRPGVEDLIDSIVAGVRSACTYAGAGSLGEFTDKAVVGIQSAAGYAEGKPLHASWG
>NZ_CP050177.1|WP_167037770.1|6665111_6665969_+|RNA-polymerase-sigma-factor-SigF
MSATSVRHAARQDAATTEHALPYLERPADVAPKDAREISKLFFARLSELEEGTRDHQYARNTLIELNLSLVRYAAGRFRNRADQMEDIVQVGTIGLIKAIDRFELTREVEFATFAVPYIVGEIKRFFRDTSWAVHVPRRLQELRIDLARATDDLSQRLDRAPTTAELAEHLGLDEDEVIEGVVAGNGYTAGSIDLPSDDSSEASAPLSDRLGAPDAGLETAENVQALKPLLKELDDRERQILRMRFGDEMTQAEIGAELGVTQMHVSRLLSRITGRLRDGLLAVE
>NZ_CP050177.1|WP_161309538.1|6666186_6666669_+|AsnC-family-transcriptional-regulator
MRLNDLDERIVHALAEDARRSFADIGALVGLSAPAVKRRVDRLRAEGAITGFTVRVDPAALGWQTEGFIEIYCSRNTSPEAIHRGLERYPEIASASTVTGDADAIVQVFAADMRHFEQVLERIAGEPYVERTKSVLVLSPLLRRYSSGSPGAPGSPARHG
>NZ_CP050177.1|WP_167034275.1|6666821_6667619_+|carbon-nitrogen-hydrolase-family-protein
MPSLRTALLQSSGRPGSVPGNLAVLDAAAGRAAAAGAGLLVCPEMFLTGYAIGDDVARLAEPADGASARAVAAIASRHGIAVAYGYPERDGERVFNAAQLVAPDGTRLADYRKTHLFGPFEREHFSAGDRPVVQAELGGLRLGLLICYDVEFPENVRAHALAGTDLLLVPTAQMHPFEFVAESVVPVRAFENQMYVAYVNRTGQEGAFEFVGLSSLAGPDGTTRARAGRGEELVLGEADPALLTASRAANPYLLDRRPGLYTSLG
>NZ_CP050177.1|WP_167034276.1|6667675_6669382_+|NAD(P)-binding-protein
MTVPTAVEHVEPAQPPITMFGPDFPFAYDDFLKDPAGLGRIPESAYGAEVAVIGGGVSGLVAAYELMKMGLRPVVYEADRLGGRLRTVGFEGCDPALTAEMGAMRFPPSSTALQHYIDLVGLETRPFPNPLAAGTPSTVVDLKGESHYARTIDDLPQVYRDVMTAWNTCLEEGADFSDMNRALRERDVPRIREIWARLVEKLDNQTFYGFLCDSPAFKSFRHREIFGQVGFGTGGWDTDFPNSILEILRVVYTEADDHHRGIVGGSEQLPLRLWADAPETMAHWPAGTSLKSLHADGEPRPAVTRLHRTAGNRVTVTDASGRIRTYRAAIFTAQSWLLLSKIACDDSLFPIDHWTAMERTHYMESSKLFVPVDRPFWRDEARDDQGRPTGRDVMSMTLTDRMTRGTYLLENGPDEPAVICLSYTWCDDSLKWLPLSAEERMEVMLSSLREIYPRVDIRRHIIGSPVTVSWENEPYFMGAFKANLPGHYRYQRRLFTHFMQDRLPADKRGIFLAGDDISWTAGWAEGAVQTALNAVWGVMNHFGGGTDPANPGPGDVFDAIAPVELPED

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Crispr_ID: NZ_CP050177_34

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_34

6824553-6824645

Orphan

Consensus_repeat	Method
TGTCCTCAAGCGCCGGACGGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_34

>merge|NZ_CP050177|34|6824553-6824645|CRISPRCasFinder
TGTCCTCAAGCGCCGGACGGGCTGGGTTTGCCGGTGGGTGGGTGCGGGGTGTGGGGGGTGCGGTTACTGATGTCCTCAATCGCCGGACGGGCT

>NZ_CP050177|34|27|6824553-6824645|CRISPRCasFinder
TGTCCTCAAGCGCCGGACGGGCT	GGGTTTGCCGGTGGGTGGGTGCGGGGTGTGGGGGGTGCGGTTACTGA
TGTCCTCAATCGCCGGACGGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167034490.1\|6825360_6826599_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|275331
NZ_CP050177.1\|WP_167034487.1\|6823320_6823773_+\|DUF4442-domain-containing-protein	unknown	unknown	gnl\|CDD\|373120
NZ_CP050177.1\|WP_167034488.1\|6823866_6824523_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP050177.1\|WP_167037800.1\|6826722_6828015_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP050177.1\|WP_167034491.1\|6828023_6828638_-\|ATP/GTP-binding-protein	unknown	unknown	gnl\|CDD\|367304
NZ_CP050177.1\|WP_167034475.1\|6816517_6817228_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP050177.1\|WP_167034493.1\|6828974_6829394_-\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422
NZ_CP050177.1\|WP_167034497.1\|6832310_6832865_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240137
NZ_CP050177.1\|WP_167034477.1\|6817584_6818763_+\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|237184
NZ_CP050177.1\|WP_167034473.1\|6815298_6816399_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|235533
NZ_CP050177.1\|WP_167034499.1\|6832918_6833326_-\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|224745
NZ_CP050177.1\|WP_167034483.1\|6820663_6822022_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP050177.1\|WP_167034494.1\|6829478_6831293_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340391
NZ_CP050177.1\|WP_167034501.1\|6833434_6834061_+\|YigZ-family-protein	unknown	unknown	gnl\|CDD\|129359
NZ_CP050177.1\|WP_167034471.1\|6814253_6815258_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	unknown	unknown	gnl\|CDD\|236515
NZ_CP050177.1\|WP_167034481.1\|6819856_6820702_+\|fused-MFS/spermidine-synthase	unknown	unknown	gnl\|CDD\|223498
NZ_CP050177.1\|WP_167034485.1\|6822084_6823227_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370676
NZ_CP050177.1\|WP_167034479.1\|6818889_6819744_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|224666
NZ_CP050177.1\|WP_167034492.1\|6828618_6828978_-\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP050177.1\|WP_167034495.1\|6831521_6832262_+\|acyltransferase	unknown	unknown	gnl\|CDD\|100053

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167034490.1\|6825360_6826599_+\|cytochrome-P450	gnl\|CDD\|275331	TIGR04538, P450_cycloAA_1, cytochrome P450, cyclodipeptide synthase-associated. Members of this subfamily are cytochrome P450 enzymes that occur next to tRNA-dependent cyclodipeptide synthases. This group does NOT include CYP121 (Rv2275) from Mycobacterium tuberculosis, adjacent to the cyclodityrosine synthetase Rv2276.	1.0307e-119
NZ_CP050177.1\|WP_167034487.1\|6823320_6823773_+\|DUF4442-domain-containing-protein	gnl\|CDD\|373120	pfam14539, DUF4442, Domain of unknown function (DUF4442). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 139 and 165 amino acids in length. There is a conserved PYF sequence motif. There is a single completely conserved residue N that may be functionally important.	8.14299e-24
NZ_CP050177.1\|WP_167034488.1\|6823866_6824523_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.46389e-36
NZ_CP050177.1\|WP_167037800.1\|6826722_6828015_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	7.90056e-45
NZ_CP050177.1\|WP_167034491.1\|6828023_6828638_-\|ATP/GTP-binding-protein	gnl\|CDD\|367304	pfam03029, ATP_bind_1, Conserved hypothetical ATP binding protein. Members of this family are found in a range of archaea and eukaryotes and have hypothesized ATP binding activity.	1.2175e-38
NZ_CP050177.1\|WP_167034475.1\|6816517_6817228_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	3.40006e-25
NZ_CP050177.1\|WP_167034493.1\|6828974_6829394_-\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	5.98573e-23
NZ_CP050177.1\|WP_167034497.1\|6832310_6832865_+\|hypothetical-protein	gnl\|CDD\|240137	cd04939, PA2301, PA2301 is an uncharacterized Pseudomonas aeruginosa protein with a YbaK-like domain of unknown function. The YbaK-like domain family includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, and ProX. The primary function of INS is to hydrolyze mischarged cysteinyl-tRNA(Pro)'s, thus helping ensure the fidelity of translation. Organisms whose ProRS lacks the INS domain express a single-domain INS homolog such as YbaK, ProX, or PrdX which supplies the function of INS in trans.	8.91264e-68
NZ_CP050177.1\|WP_167034477.1\|6817584_6818763_+\|elongation-factor-Tu	gnl\|CDD\|237184	PRK12736, PRK12736, elongation factor Tu; Reviewed.	0
NZ_CP050177.1\|WP_167034473.1\|6815298_6816399_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|235533	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional.	3.47842e-175
NZ_CP050177.1\|WP_167034499.1\|6832918_6833326_-\|CoA-binding-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	5.69839e-51
NZ_CP050177.1\|WP_167034483.1\|6820663_6822022_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.55225e-54
NZ_CP050177.1\|WP_167034494.1\|6829478_6831293_-\|sensor-histidine-kinase	gnl\|CDD\|340391	cd00075, HATPase, Histidine kinase-like ATPase domain. This superfamily includes the histidine kinase-like ATPase (HATPase) domains of several ATP-binding proteins such as histidine kinase, DNA gyrase B, topoisomerases, heat shock protein 90 (HSP90), phytochrome-like ATPases and DNA mismatch repair proteins. Domains belonging to this superfamily are also referred to as GHKL (gyrase, heat-shock protein 90, histidine kinase, MutL) ATPase domains.	9.23273e-16
NZ_CP050177.1\|WP_167034501.1\|6833434_6834061_+\|YigZ-family-protein	gnl\|CDD\|129359	TIGR00257, IMPACT_family_member_HI_0722, uncharacterized protein, YigZ family. This uncharacterized protein family includes YigZ, which has been crystallized, from E. coli. YigZ is homologous to the protein product of the mouse IMPACT gene. Crystallography shows a two-domain stucture, and the C-terminal domain is suggested to bind nucleic acids. The function is unknown. Note that the ortholog from E. coli was shown fused to the pepQ gene in GenBank entry X54687. This caused occasional misidentification of this protein as pepQ; this family is found in a number of species that lack pepQ. [Unknown function, General].	1.31335e-58
NZ_CP050177.1\|WP_167034471.1\|6814253_6815258_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	gnl\|CDD\|236515	PRK09435, PRK09435, methylmalonyl Co-A mutase-associated GTPase MeaB.	0
NZ_CP050177.1\|WP_167034481.1\|6819856_6820702_+\|fused-MFS/spermidine-synthase	gnl\|CDD\|223498	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism].	2.51792e-12
NZ_CP050177.1\|WP_167034485.1\|6822084_6823227_-\|hypothetical-protein	gnl\|CDD\|370676	pfam09770, PAT1, Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.	8.03986e-09
NZ_CP050177.1\|WP_167034479.1\|6818889_6819744_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|224666	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	3.01288e-23
NZ_CP050177.1\|WP_167034492.1\|6828618_6828978_-\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	5.31541e-35
NZ_CP050177.1\|WP_167034495.1\|6831521_6832262_+\|acyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	1.53619e-40

>NZ_CP050177.1|WP_167034488.1|6823866_6824523_+|DedA-family-protein
MHVQEWLETVPAVSIYLLVGLVIGLESLGIPLPGEIVLVSAALLASQHGEIDPYVLGACASAGAIIGDSIGYAIGRKGGRPLLAWLGGKFPKHFGEAQISMAERSFEKWGMWAVFFGRFVALLRIFAGPLAGVLHMPYWKFLIANVFGGIVWAGGTTAVIYTVGVVAEPWLKRFSWVGLGLAVLIGVGSMLVLRNRAKKSAAAAGVEPVEVGAGRGGE
>NZ_CP050177.1|WP_167034487.1|6823320_6823773_+|DUF4442-domain-containing-protein
MSADQNSVGELLTATVPMTRTLELEFVETTPERAVVRLPDRPEYHNHVGGPHAGAMFTLGESASGAIVLAAFGDQLHRAVPLAVNATIDYRKLAKGVVTATASLGRPVADVVAELDAGERPEFPVTVDLTRADGAVTAGMTVVWTLRPNA
>NZ_CP050177.1|WP_167034485.1|6822084_6823227_-|hypothetical-protein
MWPGQQPPGGEQNPQDPHPNPYQQPGYQQPGYSQPNPYQQPGYQQQPGYPPQQPSPPQPGQQGQPGQPGYPQQPGQPVGPNPYQQPTVPQYAVPGGPGPGGPGPGGPAPSGGGKKTTVVAILAALAVVVAAGVTGFLVLGGKNDDAKDTKADDQKPSVSAKPSTSSPAANPRDGSQAAKPQIAGWKVVSNPKYGTQFDVPADWEVEKPGFSTLFEDRKKGDGSPVFSFSAPAYYKSKWCSEDTDRNGETEDTSLVGTGTKGARGAKDTPSSAEIQASNLVWAAYAQQEPEARLKTVLKTSKGAPFTTTSGLKGSYSISTAAGVTKKAKCETDGKAIAFSFVNTQGEYATWVAYAAKGVPDEVADETLKKIMGTVRLAGTS
>NZ_CP050177.1|WP_167034483.1|6820663_6822022_-|MFS-transporter
MSASAGAPGRRTRPSRRPFRGPSRRPAWAGRNYTLLTAAAIVTNLGSQGALIAAAFAVLQAGGDGGDVGLVAAARTVPLVLFLLVGGALADRLPRHRVMVAANALNCVSQGAFALLVLVGEPQLWQMMVLAALGGTGHAFFSPASEGMLLSSVSGEQAGRAFALYRMAMHGAGMGGAALGGALIAVFGPGWVLAVDSVAFLVAASFRAFLDVSHIPARKPGGGMISDLREGWREFVGRSWLWSIVVQFAVVNAVVIAAESVYGPLVAEEELGGAGPWGLALAAFGAGTVVGALVMMRWRPRRLLLAGTLCVFPLALPSAALAVPLPVLPLAAVLFLTGASVEVFGVSWMTALHQEIPEDMLSRVSAYDWLGSVGMVPVAAALTGPAEQAFGRDAALWGCSALVVVLTAAVLTVPDVRHLSRRTTKVATSPASPSLSPSPSSTDAEGTVGRAG
>NZ_CP050177.1|WP_167034481.1|6819856_6820702_+|fused-MFS/spermidine-synthase
MSELIPVVRGVEFGTAKLMPDVDRERAWLLTVDGAPQSYVDLDEPTHLEFEYTRRLAHVVDSVAASGEPLAVVHLGGGGLTLPRYVAVTRPHSPQHVVEADAGLLALVAEQLPIPAGAGISVHHADARGWLAQAGERSADVIVADVFGGSRIPAHLTSVEYAREAERVLRTDGIYLANLADGAPFDFLRSQLATFAEVFEELALIAEPGVLRGRRFGNAVLVASHSAIDTAALARRTASDAFPARVEHGASLATFIGDATAVRDSGAVPSPRPPDGAFSIG
>NZ_CP050177.1|WP_167034479.1|6818889_6819744_+|patatin-like-phospholipase-family-protein
MTRTALVLGGGGITGVAWTIGVLHGLRLAGTDLTTADLIVGTSAGSVVGAQIAAGTHDLEALYERQLAPPGDERPARLGPAVLFRYARAMLVSRTPEAYGQRIGRYALAAAAGLEAEADRRAVIASRIMVDSWPERALVVTAVDALTGELRAFDRESGVPVVDAVAASCAVPGVWPPVTVEGRKWIDGGMHSPANAQLAAGYDRVVVIAPVGSGSGVVAGPQSQAAALVAGGARVEVVTPGAAAKKAIGHNVLDPGRRAGAARAGVVQGGGVVGVVGVVWGGGP
>NZ_CP050177.1|WP_167034477.1|6817584_6818763_+|elongation-factor-Tu
MSKTAYVRTKPHLNIGTMGHVDHGKTTLTAAITKVLSDRGTGTFVPFDRIDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYIKNMVTGAAQLDGAILVVSALDGIMPQTAEHVLLARQVGVDHIVVALNKADAGDDELTDLVELEVRELLTSQGYGGDTTPVVRVSGLRALEGDPRWTGSIEALLDAVDTYVPIPVRYTDAPFLLPVENVLTITGRGTVVTGAIERGTVRVGDKVQVLGGDLGPQASTVTGLETFGKPMESAEAGDNVALLLRGMPRDAIRRGQVVAAPDTVVPSRRFTARVYILSGREGGRTTPVATGYRPQFYIRTADVVGDVDLGDTAVARPGDTVTMTVELGRDIPLEPGLGFAIREGGRTVGAGTVSSLL
>NZ_CP050177.1|WP_167034475.1|6816517_6817228_-|TVP38/TMEM64-family-protein
MLDTATRPAPGIAVRCSRALRSPWSRFALLVAVLGAAGTLVLLYEPQRLLSEGWPARLTGSAAVVLFALAYGVCAVAFVPRPLLNLGAGALFGTALGLPAALAGTVLGAGLAFGLGRFLGQDALRPLLRGRWIEAADGQLSRHGFRSMLAVRLFPGVPFAAANYCAAISRMGWAPFLLATGLGSIPNTAAYVVAGSRASSPTSPIFLVAMGFIVLTGVGASIVAWRKRDALRGKDA
>NZ_CP050177.1|WP_167034473.1|6815298_6816399_+|enoyl-CoA-hydratase/isomerase-family-protein
MDDEQHVLTHRQGGVGQVILNRPRALNALTHGMVSGISEALAAWERDDDVRAVVISGAGERGLCAGGDIRAIYEDARVGGGASEAFWRDEYRLNAYIARYPKPYVAFMDGIVMGGGVGVSAHGGVRIVTERSAVAMPETGIGLVPDVGGTYLLSRAPGEVGTHLALTGVVVGAADAVWCGLADHFVASDRLEGVRDALGEALRGALAGGLADGRVQVEGVVREVVARFAGVAPEGRLAADRGWIDACYAADTVEEIVDRLYGDGHPAAKEAAETLLTRSPTALKATLASLRRARGLPTLESVLEQEYRASCAALATADLVEGIRAQVIDKDRAPRWVPGELAGVTGGEVERFFLVPGSGDLWGGVR
>NZ_CP050177.1|WP_167034471.1|6814253_6815258_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB
MPPRIDLDSYAKGVLDGSRAYIARAITLVESTRPDHRALAQGLLTELLPHAGKARRIGISGVPGVGKSTFIDALGTMLTGLGHRVAVLAVDPSSSRTGGSILGDKTRMERLAVDPKAFVRPSPTAGTLGGVAKATRETIVVMEAAGYDVVLVETVGVGQSETTVSRMVDSFLLLTLARTGDQLQGIKKGVLELADVITVNKADGPHEHDAHAAARELAGALRLMHPVDAAWTPPVLSCSAREGTGLDVVWDRLEQHRAILEADGRLERKRRDQQVDWTWSMVRDHLLDRLRENPEVRELAPGLEQRVRDGTLTPTLAADRIIEALGRPVPGRDV
>NZ_CP050177.1|WP_167034490.1|6825360_6826599_+|cytochrome-P450
MATAQQIPDILSAEFAANPYPAYRAMREHAPLIWHEATGSWIISRYDDVERAFKDKESVFTTDNYNWQIEPVHGRTILQLSGREHAVRRALVAPAFRGGDLQDKFLPVIDRNARELIDTFRHTGTVDLVEAFATRFPINVIVDMLGLDKSDHERFHTWYTAVIAFLGNLSGDPRVMADGERTRVEFAEYMIPIIHARRDNLGDDLLSTLCAAEVDGVRMSDEDIKSFCSLLLAAGGETTDKAIASLFANLLLHPEQLAAVRADRSLIPRAFAETLRFTPPVHMIMRQTAVDVEVSGGTIPSGATVTCLIGAANRDSSRYAEPDTFDIFRDDLTTTTAFSAAADHLAFALGRHFCVGALLAKAEIETGVNQLLDAMPDLRLADGFDPVEQGVFTRGPRSLPVVFTPTSDPASA
>NZ_CP050177.1|WP_167037800.1|6826722_6828015_-|cytochrome-P450
MTESATGQPVTDDAPPPGATPPPGCPAHPGAVSLSGLEFQQTPSELYRALRRRHGTVAPVLLDGDIPAWLVLGYSEVSYVTGHDELFARDSRRWNQWPAIPPDWPLMPFVGHQPSVLFTEGTEHQRRAGVITEALEAVDQFELAQLCREIAEALIDSFAGSGQAELMTSYAHALPMRAVVRLCGMPGGGSGDTDDLVRDLRISLDAAEGDDPVAAYLRVQARIERLVKDKRSSPGSDITSRMLTHPAGLSDVEIVQDLITVIAAAQQPTANWICNTLRLLLTDDRFALNVSGGRIGVGQALNEVLWLDTPTQNFIGRWAVRDTQLGGRQIMAGDCLVLGLAAANTDPLIWPGGAVGAENSAHLSFSNGEHRCPYPAPLLADVIARTAIETLLERLPDVVLSVEPHELSWRPSIWMRGLTSLPVRFTPAAR
>NZ_CP050177.1|WP_167034491.1|6828023_6828638_-|ATP/GTP-binding-protein
MDSMLSELPGRTPLADGAETGLKIVVVGGFGVGKTTLVRSVSEIRPLNTEEVMTQAGVGVDDPAGLTTKTTTTVAFDFGRISLNDRMVLYLFGAPGQERFWFLWDRLFSGTLGAVVLVDTRRMSESWYAIDRLEHHRTPFVVAVNRFDDDVSAFSLAEIRQALSLAEHVPLIDCDARVRSSGKNVLITLVDHLYELAMARELTP
>NZ_CP050177.1|WP_167034492.1|6828618_6828978_-|DUF742-domain-containing-protein
MIRKPVDTGDPHRLYTVTGGRSRVDDDTFDLVTLIVAECEPTPGMQSEHARILALCRHPTAVVEISAEVKLPVTVVRILLGDLLATGRITARRPRAGRSVTSPPDSAFLKEVLHGLHAL
>NZ_CP050177.1|WP_167034493.1|6828974_6829394_-|roadblock/LC7-domain-containing-protein
MQTTDNSLTWLLESLLERTPGTRHALVLSRDGLKLCWSRFLTVDQADQLAAICSGIQALAQGASVEFGNGSGGVRHSMTEFHGGLLFIVEAGEGAHLAVVAEDGADPGVVGHRMTELVEQIGEHLRAEPRTTDRESSPS
>NZ_CP050177.1|WP_167034494.1|6829478_6831293_-|sensor-histidine-kinase
MSVPVAPSPHRIRPARSLSLAVPLAALVVVAAAAAAAALAAPVPARAWVAATAAGAWVCVAVTVAAAVVLVRQGRRGAVTADGEVRTAQTQLAQFGGESAHLLNVSLPSVVKRLRDGASAEAAIAATAPPSDPQLRRLLEVFAAEVAASERRAAESRADCATAVERLARGADDLDRLMTTTLPAALGGLRSGGSADTVLGTVEPPTDPRLRVLVDVIVREFATSERRGAAAQAASAKALSRVQAKAVSMLADLREMQDKYGEEVFGDLLKLDHNTSQLGLLTDRLALLMGGRASRSWNKPIPMESVLRGAVGRISAYQRVRLHCSSDAAIAGFAAEGVMHLLAELMDNAANFSPPIDEVHVYVEERTAGIVVTIEDSGLKMADAAMRRAEESVSGRMNDLATLQGTRLGLAVVGRLAAKYHLSVNYRPSSRGGTGVVVLFPPQLLAQQRAVLPEQSVRPTRDTFPERDPLPEQASFPEQAGFPERAVGAEPAVRNGHGVRTGQAAFPEHPVRPPDPTARPADADTPPPAAPPLPAPAAPGDGPRVATPNGLPVRPPGRTMAAADRGRPEPEPETGAPRTGRDAGSQFGAFHRARHAHRPPEGTP
>NZ_CP050177.1|WP_167034495.1|6831521_6832262_+|acyltransferase
MPKNGTVLSSLAAWRRSLASRAVQRGWRWIQDTGAVTAEHPGRLRFARIGAGTRLAFPQGTVFGEAWIALGDHCVIGEQVTLTAGMMPGLDLGPATLLTLGDGVVLGRGSHVIADTTVTIGSDTYCGPYVYITSTNHSYDDPATPVGKQWPRFEPVEIGPGCWLGTGAVVLPGARLGRNVVVAAGAVVRGEVPDHAVVAGAPARVVRSWDPERGWQPPLRTPAPVPIPEGITPEQLLALGDRDPDA
>NZ_CP050177.1|WP_167034497.1|6832310_6832865_+|hypothetical-protein
MRAPLGDFADARPAPDCLDLLVEPVARAVRAWQGAVPADQLVFVDTDPAIADTAAFVEHHGAELLDRSANCVVVAGKRAGGSTLAACVVLSRTRVDVNGVVRKQLGARKASFAPMDTAVSETGMEYGGITPIGLPDGWPLFVDSAVVDTEWVLIGSGRRRGKLIVPGKAFADLPGVVVLESLGI
>NZ_CP050177.1|WP_167034499.1|6832918_6833326_-|CoA-binding-protein
MYADDKTIREILTSTGDTWAVVGLSNNTSRAAYGVAGVLQRFGKRIVPVHPKAESVHGEQGYASLADIPFPVDVVDVFVNSEQAGAVADDAVSIGAKAVWFQLGVVDEQAYDRTRQAGLAMVMDRCPAIEIPRLG
>NZ_CP050177.1|WP_167034501.1|6833434_6834061_+|YigZ-family-protein
MQEQYRTVARAGVHETEINRSRFLCAVAPVADEREAQEFVAGIRKEHPTAGHHCFAYVIGADASVQKASDDGEPGGTAGVPMLDMLLRREMRYVVAVVTRYYGGVKLGAGGLIRAYGGAVGEALDLVGVRTRRRFRLATVTVDHQRAGKLENDLRATGRAVREVRYAEAVTIGIGLPDGEVDTFRAWLADTTAGTAVLELGGEAYGDG

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Crispr_ID: NZ_CP050177_35

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_35

7015334-7015437

Orphan

Consensus_repeat	Method
GACCGGCCCGCCCGCCGACCGGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP050177_35

>merge|NZ_CP050177|35|7015334-7015437|CRISPRCasFinder
CACCGTCCCTCCCCCCAGCCGCCGACCTCTGACTCGGCCGGGTCGGACCGGCCCGCCCGCCGACCGGCCCGCCCGCCGACCGGCCCGCCCGCCGACCGGCCCGT

>NZ_CP050177|35|28|7015334-7015437|CRISPRCasFinder
CACCGTCCCTCCCCCCAGCCGCC	GACCTCTGACTCGGCCGG
GTCGGACCGGCCCGCCCGCCGAC	CGGCCCGCCCGCCGACC
GGCCCGCCCGCCGACCGGCCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167034742.1\|7003655_7004096_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP050177.1\|WP_167034765.1\|7021728_7023351_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293817
NZ_CP050177.1\|WP_167034744.1\|7004901_7005567_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP050177.1\|WP_167034773.1\|7029970_7030537_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226472
NZ_CP050177.1\|WP_167034750.1\|7008669_7010436_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293840
NZ_CP050177.1\|WP_167037844.1\|7006719_7007181_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167034754.1\|7010974_7011934_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167037847.1\|7032199_7032859_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP050177.1\|WP_167034775.1\|7030670_7032164_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP050177.1\|WP_167037850.1\|7033606_7034269_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP050177.1\|WP_167034746.1\|7005610_7006672_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274817
NZ_CP050177.1\|WP_167034760.1\|7015538_7017386_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167034767.1\|7023350_7025684_-\|LamG-domain-containing-protein	unknown	unknown	gnl\|CDD\|379155
NZ_CP050177.1\|WP_167034763.1\|7017382_7021714_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
NZ_CP050177.1\|WP_167034771.1\|7025892_7029696_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167037841.1\|7004117_7004813_-\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|213983
NZ_CP050177.1\|WP_167034748.1\|7007406_7008564_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|235815
NZ_CP050177.1\|WP_167034769.1\|7025680_7025884_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167034756.1\|7012055_7014176_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP050177.1\|WP_167034752.1\|7010574_7010943_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167034742.1\|7003655_7004096_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.26886e-12
NZ_CP050177.1\|WP_167034765.1\|7021728_7023351_-\|hypothetical-protein	gnl\|CDD\|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	8.23795e-12
NZ_CP050177.1\|WP_167034744.1\|7004901_7005567_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.25977e-08
NZ_CP050177.1\|WP_167037850.1\|7033606_7034269_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	3.43434e-33
NZ_CP050177.1\|WP_167034750.1\|7008669_7010436_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293840	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.20983e-43
NZ_CP050177.1\|WP_167034748.1\|7007406_7008564_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|235815	PRK06489, PRK06489, hypothetical protein; Provisional.	2.07448e-159
NZ_CP050177.1\|WP_167037847.1\|7032199_7032859_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.36656e-66
NZ_CP050177.1\|WP_167034775.1\|7030670_7032164_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.74679e-35
NZ_CP050177.1\|WP_167034746.1\|7005610_7006672_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274817	TIGR03858, LLM_2I7G, probable oxidoreductase, LLM family. This model describes a highly conserved, somewhat broadly distributed family withing the luciferase-like monooxygenase (LLM) superfamily. Most members are from species incapable of synthesizing coenzyme F420, bound by some members of the LLM superfamily. Members, therefore, are more likely to use FMN as a cofactor.	1.37702e-112
NZ_CP050177.1\|WP_167034767.1\|7023350_7025684_-\|LamG-domain-containing-protein	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	9.13587e-15
NZ_CP050177.1\|WP_167034763.1\|7017382_7021714_-\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.00102258
NZ_CP050177.1\|WP_167034773.1\|7029970_7030537_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|226472	COG3963, COG3963, Phospholipid N-methyltransferase [Lipid metabolism].	5.53477e-29
NZ_CP050177.1\|WP_167037841.1\|7004117_7004813_-\|hemerythrin-domain-containing-protein	gnl\|CDD\|213983	cd12108, Hr-like, Hemerythrin-like domain. Hemerythrin (Hr) like domains have the same four alpha helix bundle and a similar, but slightly different active site structure than hemerythrin. They are non-heme diiron binding proteins mainly found in bacteria and eukaryotes. Like Hr, they may be involved in oxygen transport or like human FBXL5 (F-box and leucine-rich repeat protein 5), a member of this group, play a role in cellular iron homeostasis.	3.27306e-23
NZ_CP050177.1\|WP_167034756.1\|7012055_7014176_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	4.92115e-47

>NZ_CP050177.1|WP_167034756.1|7012055_7014176_-|SpoIIE-family-protein-phosphatase
MGNDVARCSTHDIDRALLDVVRLTGAHVGAVYECVPQEHVIRMTVVTGVSRRIAQPWSRVAMSAPVPVAEAARERRLIWLSGHSEVARRYPRTALAFPYHSSMCVAPLLAGSTCWGVVLLLWPGNRAPRLTCRETDAITSAADRMGEVLQEARIPDEPVRDPSPLRTLAHARPAARRTEAEAHAGADLVERLHEGLFAMDLDGRVTYLNEQAAVLLGGERPATTGARLWEALPWLDDPAYENLYLSALFSRLPTSFTALKPPDTWLSFRLFPDLTGVSARVAPASAPDAGPPRAPDPPMGAQSGAGSLFHLMHLSSALTQAVGVKDVTGCVTDQIMPVINAHGLALVSADDERLRILSSLGFPEALTERLDGLPLTVNSAGARAIRSGIPSFFADDDELVRAYPHLKDLYSDLGPVCYLPLLASGRTVGCCVLRFPRPHPFPHEERAALTSLAGMIAQALERARLYDTQSQIARGLQAVLLPRTLPDIPGLGVTARYLPATSGMDIGGDFYDLIRLDHHRVAAVIGDVQGHNVNAAALMGQLRTAIQAHATSGAPPEEVLKRTNRLIHGLDPGLFASCLYAELDLRDGTARAAVAGHPPLILAPPGRTAGVLDTTPGVPLGIEAESAYEATVFRTPPGSLLTLYTDGLVERPGTDLGAAIDDLAGQIEGLRSRPLDVVADELIDQAWRNGQGRDDIALLLIRPHAP
>NZ_CP050177.1|WP_167034754.1|7010974_7011934_-|hypothetical-protein
MAVQHTRTPPHDTRPREPRIPAGEPGHEGPDREAVRLSIGKLLDHDRRHGPEQVADAALALWRNHAHTTGRVRTPHLATEAEIAQVAGWLLFHADRQGEAHRALLKAAHLARLAGEPGFRSFVLDLLSMHAVETGDVGEAVALADAVLSSSRASPRLHVMAHVRKARAYAIIGERARALREIDQAKVNVLDSVAETDPDWSRWIDLRQVATHETEILARVGHGEAALERLVGTSEAAGTPLQRLTSLVAICGTAARLTAWREVGSTTQEIAVLLPQTPFALPLARFRRMAGRVDRSNAPVALKRLVRHVADGPTALVRA
>NZ_CP050177.1|WP_167034752.1|7010574_7010943_-|hypothetical-protein
MTSFGDGLAEDVTLECSMGNLAVRGRDAVRARLTTVGGFHDNWVHRFSAYAGDYGMEEYEGMVAGQPVKVTVTTHRNAEGNYGLARDKPPPALRGADVVTPRRRIVHRRVSEALKTRCPQCG
>NZ_CP050177.1|WP_167034750.1|7008669_7010436_-|MBL-fold-metallo-hydrolase
MTPHSSSAPSSRPPNPDLSPPGITRNLTAEAMMTAARWPNATPQLVLALSGVLTASRRFGEAYHFFHELAGQRPDQPLLAAVAGSFRARLPGRIGEAVNTLDTAVAALPGLPNYFRGLVLAELPPEAGRTGDAVADLERVLALGDAFPIGPRRGAYRALARAYELLGRTEDAAAARRKAGLDAQPDLPPLSTDYWVNERDGFRFAPRRFRELAEGVHVTQGFGFGEIGFVVTDSSLVVIDAGGTNEQARAALRAMREISDLPVSHVILTHGHWDHIGGVDELRGPGVEVIAQAGFAAEVEAQNAGFVPWTRFLPAGAGHRHDVVPDRLIGEPESLTVGGVDIRLLPVHGGETDDALLVHLPGRDVVFVGDILMPHLGAPFFAEGSAEGLLDTLRLLDDLGPALLVHGHAPLTAAFTPVALAGLRPALEDLYRVVRGDITAGRTVHDILDRNHMPDVLRSHPASVLPYILLRDNVVRRVQRQHTGYWQPDLDSVDPVSPKEWTAVLELLSGGKADVYTDTIETLLERDDLAPALRVADAALQSHPGSATLAELRRRTLLRLVERHQQTAPFKFVVYSELADLSVPEMTG
>NZ_CP050177.1|WP_167034748.1|7007406_7008564_-|alpha/beta-fold-hydrolase
MRKLPSLLLALLVVAVSGVTHRTASPAQAPAQRRTAAEASLSVLSSDRPTTVVNPRQQDVTYTDYTFRDGETLARLRLHYALLGTPHVNRHGTVDNAVLLLHWTGAAGQNLLTPEFQDALFAPGAPFDITRYFVIIPDAVGHGGSSKPSDGLRAGFPHYGYQDMVDLQHKLVTETLGIPHLRAVVGMSMGCMNAWQWAEAYPDAMDGIMPVACFPAPVSGRNLLWRRVIIDGVKSDPAYENGNYRQQPPSAAVAFNVAQMMINGVPNLQAQITSPQAADQYIQAVKSQTAGQDANDLLYAFEASADFDAEPRLGDIRAKVFALNFADDEFYPDSLRILERDSAEVRNAKVVIRPASADSVGHLSMSRPGLWKDQAARFLLWLNTA
>NZ_CP050177.1|WP_167037844.1|7006719_7007181_-|hypothetical-protein
MDELSFFLGSWDAPGKFHHTPFAPEKPIHMDIVGSGELDPHFLRISTAERPTPENRNPLRATYLWGYDTASDEFVADWFDSNGGRARQRSTGWSGDTLVFEGTITMAGATVPLRDTFTRHDQDSYHHIGEIDLGQGWIPVDEEDVRRVSPSAA
>NZ_CP050177.1|WP_167034746.1|7005610_7006672_-|LLM-class-flavin-dependent-oxidoreductase
MNAPLPATDVGIASLTDIQSPTVDGRNVTTGERHRRLVVLGETAERLGLDHIGIGEHHSPDFAVSSPAVVLAAIAARTSTIRLTSSVSTLSTLDPVRLYEDFATLDLVSAGRAEVTVGRSAYPDPFRLFGVPMEKYDAVFEEKLELFLRVRGTAHVTWRGRFRSGLDAAAVVPRAQQDPLPVWVGVGGTPESAERAGRLGLPMMLGYIGGPAERLAYLAARYRAAGEEAGTTDRLRLGLGVHFFATDSAANARDTYPYYREFLRPKSPNGGGFTVLPEQFEAGLGPHGHLLVGTPEHITEKALRLHEAIRFDRLQALVDWGGLPEDAVGSSLEHLGRTIAPALRDASHHAAPA
>NZ_CP050177.1|WP_167034744.1|7004901_7005567_-|TetR/AcrR-family-transcriptional-regulator
MVLYEDTVPPRQRRTDARRNRVKVLTAATDLYAARGLEVSLNEIARHAKVGIATLQRNFPQREDLVAEVFAPRVREYADAAEAAAENPDPWAAFRGYVELVCRMQCEDRGFAAVLNTSFPASAELEAERRRALRGFTRLVRRAKEAGVLRGDFSPHDLPLFLLANAGVVIGTGSNAAKASRRLTAFFLQSCALVDSEPLPAGPPARSLLRTLDPPLPPTPQ
>NZ_CP050177.1|WP_167037841.1|7004117_7004813_-|hemerythrin-domain-containing-protein
MADVRDMYTAHVMLRREFRLLPGLVRGVPPGDIKRAKIVATHAEKICLVLHLHHEGEDLVLWPLLLERGGEQTSAIVPTMEEQHHGIETALRDVTELLAAWKESARGGELLAASCETLSARLQEHMAMEEERILPLVEEHVTAAEWAQLGEHGLNGTPKQDLPLVLGMVMYEGDPLVLKEILSKAPLAARLVMPFVGPRVYARHARRVYGTPTPPRVGDGHIEPGPGLTSA
>NZ_CP050177.1|WP_167034742.1|7003655_7004096_-|MarR-family-transcriptional-regulator
MGESSVREIVHDCLAVRVRLIGRAVTSLYDGALDRHGVTIAQVNLLAALGAAGPCPPSKLGDVLQLERSTVSRNLKLLLHHGWVEIVSSDAKGIREIELTPAGRAKIESVMPEWRQAQREAARILGATGVTALQGIASGMGYPPGA
>NZ_CP050177.1|WP_167034760.1|7015538_7017386_-|hypothetical-protein
MTTTTEPQRVAFVDHLVPTLPGDEYTVTVTQTVLPPDEPVQQFTAVRRFTVAADPHTLAPELVRAVFPPEGSLGDHSTALPHIALSRPTLPWEHSATDPPPGEGVTPVPWLALLLFASDEQPAPQVVTVTDNGNEERATVIDVPRALLERLLPSAAELPLLAHVRRGGDADTAFVIGNRLPPAGSTSTVHLVSLAGRYRTAAGDSEPAFDFGSGGPDAPVRLVSLASWRFACVDADRSFAPLVRRLSRGWSPFRLPEAATDSAADTLAETFLARGYVPVRHTLRGGGRTVAWYRGPFASGPVAADETPALWSAPVRTADRLLRYHPGLGMFDVSLASAWQLGRLLALQSKDFSTTLYEWKRRRDQAHKRAGTLSAAGADHPLEIAGIDDALPSGAADWLTGLAELRGVPFSYLVPDERLLPVETIRFLGVDQQWVRCLVDGAYSLGRVGTVDAELDASHALPRALPTVTGALIRSDVVSGYPDLEIAGFAESFGGEPLPVLRRETLSRNILLCLFTGTVRRLEVRRRAESLHFGLEPGGGEGTVTKNLRPPGDGDGPELFVPDLTVGEGRVVDVRGLADVMATTLGVDADAFGSGAFARQMIETADRVTFRHADV
>NZ_CP050177.1|WP_167034763.1|7017382_7021714_-|hypothetical-protein
MTDLAALRDTLTGRGAALELTGSDTALPQPLRDLVSGLPGGLVRLTAAPGGPVLADGVLTLTGTTDDTWPVTGLTGVTVHPATVVVTVTAAPVVTVTATGTMNLAGTAVNVVVAAITEQGFPGWHVTPGAAVAGVRAADLLAIGLGGSLSVLPVPAGLDALGGAATLAPDRFGLSFFPGTVLAPRYAFVLGVPAAQWAPVPSVLELDGLDIAASMVAGSFSVTLIGHLEIGGTPVDLRVGIVPGRVWTAEVAPGDGGTFPGITDLIAWIGGTSGGGGLGGLGFDADGIDAAIEAVRVTFDPNALTLDSVEVVTELTLGALRFDVAVRLPDLTVRGFLHPGDPLPITAVLESFDLPSDGIPADLAVTEASFSAQPSVSAYAAALGLSGVWSAGPLAIRSLGASVAYSATQGLTGRLSGVIGIGTSAELYVSASYEGPSDGWVFTGGTLPGPVLSIGDLLDDLATSFGIGDVPQLLRDLTLTDVSVEYRGGTGAFALGCTGTLDLAGTPVSLTVDIDLRRATGGTAGYSATFGGSLTVGTRTFRIAFDRSAEESRTFVAAFVPGADPVTLTLRDLVGFLSAGAAESVPEGLSVGLESALIAYVRPAGAAQGRFAVALGAAVGADLASLPLIGEKLPAGATLSVRRLRFVYGSGALTAADVAVVNGLLPAAVPPLAPTTGGAQATVDLRIGDTDTRLEIGAAPPPALPPAPAAALTTTAAAAPAAVPADDVTWYPVQKQLGPVTFERVGFTLLRPPDADAVLAFLLDASLAVGGLSLSLDGLSVGIAPGDLASGPRFSLRGLGVAYRSGTVEIGGAFLKDTVEYEGRTYDSYNGAAVLRSGQLQLSALGSYMQLPQGPSLFVYAALNYPIGGPPVFFVRGLAAGFGYNRRLVPPPIDKIATFPLVTEVMSPPSGASSVDVGAKLRALRDYLPPSAGDFFLAVGVRFTSFQMIDSFLLLVVGFGRRVEVNLLGLSTVQLPAPETSAPGVAPIARVQLALQATLVPEDGFFGIRGQLTEDSYLLSRDCRLTGGFAFRTWFGDTHTGDFVVTVGGYHPRYAVPAHYPAVPRLGFSWQVSPELAMKGGAYFALTPSALMAGGSFAATYQDGSTKAWFSASMDFLIGWKPYHYEASFRISVGASYTFWAFGTQTVRVQVDAGVDLWGPEFGGLATVDVGPFSFDVSLGSDAARTSPDALSWTAFRTSLLPAPKDVVTVVLAGGASPGPEPGENDLGFVNALELVLVTDCVVPSRDSERGGNVPLPAGTGPTAFGIAPLGLSKQANVASTHRIEITGSDGADAGDRFTYAPVRKNLPSALWGGSLKPSLGAAATVDGLLTGFTVRPLPPTEPAGPAPSLTRAALQEGTELVPPADDAFRWLPPAPFAETGGPDGPGLIEADITAPGTADARYAIAAALLGEGVPIDLTGFRGGDFRAAPRVAATTQSEGTRA
>NZ_CP050177.1|WP_167034765.1|7021728_7023351_-|hypothetical-protein
MAWQLDIHVLDVGQGQSVLVVASDAAAGAGATRTLLIDGGHQQSAPDIRRGIAAAGVDRVDVMISTNYDVDHLGGLIGLLRADNAWQLADYVAAAAVAAAVPHAASTSDFHVAAAAAAIALLRGVPATDVPRINSIVNLMLLSVPPMANDVVRAGFAMNETEDAINGWISTGMPLGATLARTVQQRLNYAHAVAVTAGQWLALPQAGITAKAAEALTWMLCATAQIPMVSTEGLFRNTRVIDIGNLPAASPWWPLALAGAVETVAGTRVTAPGFVARPYGFPALGTELLWAGGAPANAATAPVAVMVSGRRRAWQGPNPSAAVNADTPSNNASIGVVVRFNNFAFMTCGDLPHDGEDALGAALTTHPLPTAAGGGATAPAPTRIAAYTCGHHGASTATSNPLVPQAFLNSATPVTPIISCGANLYPHPHGQTTARLQAAVSVAAFYLTNCRHARLEVPYSPGPGVPAVPQQGHPQKGRIAGDNGGPGGHAGDISLQVTQAASQAAAGAGQYSVSYWDQALAAPVPGGAPAPGAVTNIVNF
>NZ_CP050177.1|WP_167034767.1|7023350_7025684_-|LamG-domain-containing-protein
MTTAGPLLHWHLDELVENAGVPDSSGNRLNGAAEGDPKNVPDELFGSCLTLDGDADAVVLPAAAGPLPGVHTLELWVDADPPANDGRTLAVLPFAGPALVLRADGSLRHVLPDGTEASAAPAGTVLPGRWQHIAVTAGDDELTVHVGGEPVTRIPRPDKPVPGEDTPALIVGRGLSGTGHLAGRVAHVRVYGGVLTPEEIRLDMAEDEAELSAFVRTYPIGFELLNEDEHPVLFIDDAPGDHPMTVRLTNASRDEVVPTPSGGEAGPDNHHFALRFRAGVLSGGSVPRTETAGWSMSAGTDTIYLLLTGEQPPSIRPGGSLTVTLLGLNGDGGGGTRGTRVELAYRRLAYLGDPQELTGTRLQALELVNHRGRKELPLHVDFVDGDSVLSDGATANTLRLRIANTSRDVPVRLRGLDEATPAADGDGTGTDATTIVVSFEVQEANEVREWALVTGAAKDGAALGLPVPSSTWEAPARSFPGERVQWRLRPVTSTQLEPGGRLDLLLTGVIAPPSLGVANVYVDLVNLPDYVDGSFTATVRKAPLLFSQTSVGIGTRDPKARLHILDPGNISNNAGAGTLVLGPITGTNLRLGYHGDYTWIQGHGQRPLALNPLGNHVGIGTTTPSSRLTVLSGDAVQIDVRQGATGPANGAPTILFTREGGWRHRIEARADGFHLKTGEPGLDTLSGLSAARVTAAEVVTPALTIGGVTIGEAELRILKRLAAGTLTLKVFNPDRNEYLFSSDINDGAGRRSVYTSALSPTDPTIPHFRVWQLREVT
>NZ_CP050177.1|WP_167034769.1|7025680_7025884_-|hypothetical-protein
MTQPDTVSPPSPSLTLELTLDEANLVLEALGQLPYARVYRFIDRIQEEARTQLAPAGAGHDTRGSLA
>NZ_CP050177.1|WP_167034771.1|7025892_7029696_-|hypothetical-protein
MGAVLVVPVHLDALVLDRDRDVTAPAVDFAGLPHVHPADGRDHGADVPYLGEALLSVPFQDQTFRLRAGVHLHWALPSALTGLDHRRADERTGAPLAPAVPNRWLVTRSRGGAVERQWVVESDYCATGDTGGVPYPYIEGEVPGPASPPFRRLGRRVPLHVWEPYADGGGDAPYLRRLTATGYGEPAFATFYPHCHSVFGLHDPEPAGGPAADLRYDVVGWYADLAHDAAVAELDRAGSESDVPWPRVLRDGLGWDAAGDDTDSAPDRTVCVGRLDFAPDRAAGAEADADEPVTVCVGSTPTEALAAHLGDVLPGASRDGLENLLEALAFADDLESAPLDVGAKLAEARHAGTFRTLPSGQVWTVRPKDRPAASAQDDPPGLAGLAHRVGDLLDTLNGAQGAYDRAVRDLTGMREELFADWCRYLLCVYPPESRPDSYPSPDLAAFHLRRQAARIQRRQAAVGTTLADAVREAETALTAALDDDLYEPARVPGPSYYEPLEPVVLLSGAAATPSERYGRGDSLDPAGLLDCALVRAEDAALALDGPDALRALRGAVLDAVGPRTWERPPWHPLFLHWQVEFFPVARGGNVAADPGTGRDYAADYLTGSHTLDGGEVELVPVPGRAAFVNAANVYTGSTVLSPAARPVLSARILRYLEKPLLLARNDGAEEAARVTPEQYRDDPAPVLDWYRENGDDARLRTLVDAQRHLAVHERANLAQSLGGFNDALLMRRLIRQLPVADPLGFPGGQELARLVDAVVGDATRLSPQPLSGFNPVRAGALKLLRLRIVDTFGQVRDIALDEDRVRTTTRLRVPDHPDWVALPPRLTQPARLSLRWLDAGGDADDVLRETNAVPSTSPVCGWILPNRLDGGLAVHAADGRGLGTLLALPDLADADRAQWHPAPGRPATAVDEIPNLRLRTVVRHLRDLGADGVRDLLGTLDDALASIEPEDYALHRSRALLVSRPVAVVRAAVGLELMGLPAAHQDWNVFRQDLRRGAHETDGFTRTRFPVRVGDHGRLGDAVAAYWCEPAPGKLPAGPPLSPLTAPPLERTVDAPPQCLTLLVDPRGAVHACCGALPAKSISLPEAHYRAALERMETWSLNAPVLTDAESVGLPLPQEPGFLWSWTEATPTGWTETSTTPTVRRADVLAAVAGVPGTGDVWAALVRLGWITPLDSDTATVAPAETRAEPGTADLPQDAVAPLTALLDRPGVAEALPEARFPDRPTAREGWLTLRPLPPSTVPSTASSTAPSTTTSTTAGPPAAPSQ
>NZ_CP050177.1|WP_167034773.1|7029970_7030537_-|methyltransferase-domain-containing-protein
MSITTEFLRRPFMTGAVAASSRRLAYTMTRGIGLPKARLVVELGPGTGVFTDAILAQLAPDARLVAVELNPALAARLSATRRDPRLTVVQGSAAELAAVVGEPVDVVVSGLPWTVMPQDRRARILDAVSHVLAPGGRFTTFAYLHAAWTPPARHFTAELATRFDRLERSRTIWGNLPPAFVHRATRKP
>NZ_CP050177.1|WP_167034775.1|7030670_7032164_+|sensor-histidine-kinase
MQRLIETLLRLRRGHPWLTDLLLVVLVAVPPVIHEQPGWRPVWVQTSVYVALVLPLLWRRRRPVLVAALVTVAFWVQHVGEVWGHESGRGAVALAAVLITLTVRGLRRAAAATVLGVAGCVLLWIPAWQRDNTGPDARDVWLTPLALGLLLFGAWVFGEYVRARRAYVAECERRAALAESERLALARVAVAEERARIAREIHDVLAHSVSVMVLNAEGGRMMRTVDPAAVDSTLDVISATGREALDELRRLLDVLRTPDGDGDGGVPGVTGDAGHAGAVPTLSADLGRLVGRLNTSGTRAGLDLRGDQGGLPPGLTAQTYRIVQEALTNVVKHAPPDATIRVRVDTGTPGPGRQVRVRVENSAGAGGGALPGRPTPVPALSGHGLTGMRERTALYGGSVDAGPTPGGGYRVTATLRATAPGPTAGRATAPGSAAPGSTGPGPVGSGSTPPAPTAGRATALGSTAPGLTGSGSTGSGSTAPGLTAPGLTAPGLTAAVP
>NZ_CP050177.1|WP_167037847.1|7032199_7032859_+|response-regulator-transcription-factor
MSRVLICDDQELIRMGLRMVIDSQPDLSVVGEAADGDAAITAVAALDPDLVLMDIRMPGLDGLAATEHLCARPDGPRILVVTTFDLDEYAYAALRAGANGFLVKDAPAEEILVTVRAVLRGEVMVAPSLTRRLVERFVLQAPESAPAQRGRLAALTDREREVLALVAHGLANGEIADRLFVGETTVKTHLGRVLTKLGLRDRIHAVIFAYESGLIRAGD
>NZ_CP050177.1|WP_167037850.1|7033606_7034269_-|DedA-family-protein
MVPLAESLAVNVLDAGSLLSAFGALGVAVVLFAETGLLVGFFLPGDSLLFTAGLLCVNGSRGTAHLSLPQVLVAAVAGALAGAQVGFWIGRRGGRALLARSRATRLREGAARAEELLTRYGHAKAIVLARFVPVVRTVLNPLAGALGVPAKVFLLWQTVGGVVWTAGLVLAGYALGSSIPGVDRYLLPLVAVVVIVSLIPLALELRRARARGRTAGGDVP

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Crispr_ID: NZ_CP050177_36

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050177_36

7539516-7539609

Orphan

Consensus_repeat	Method
GGGTCGCAGCGGCGCCCAGAGCTGAGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050177_36

>merge|NZ_CP050177|36|7539516-7539609|CRISPRCasFinder
GGGTCGCAGCGGCGCCCAGAGCTGAGCCGACCCTGGTCGTAAGGCTTTCGGGCCTGAACCGACCCGGGTCGCAGCGGCGCCCAGGGCTGAGCCG

>NZ_CP050177|36|29|7539516-7539609|CRISPRCasFinder
GGGTCGCAGCGGCGCCCAGAGCTGAGCCG	ACCCTGGTCGTAAGGCTTTCGGGCCTGAACCGACCC
GGGTCGCAGCGGCGCCCAGGGCTGAGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050177.1\|WP_167035584.1\|7541073_7541352_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167035573.1\|7531562_7531925_-\|DUF1304-domain-containing-protein	unknown	unknown	gnl\|CDD\|377753
NZ_CP050177.1\|WP_167037989.1\|7534667_7536056_+\|chitinase	unknown	unknown	gnl\|CDD\|119360
NZ_CP050177.1\|WP_167035593.1\|7548552_7550478_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223039
NZ_CP050177.1\|WP_167035595.1\|7550656_7552159_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167035575.1\|7532172_7532970_-\|ribonuclease	unknown	unknown	gnl\|CDD\|225231
NZ_CP050177.1\|WP_167035579.1\|7536133_7538344_+\|RICIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|379501
NZ_CP050177.1\|WP_167035569.1\|7529321_7530785_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP050177.1\|WP_167037997.1\|7543715_7548110_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274860
NZ_CP050177.1\|WP_167035565.1\|7526382_7527504_-\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736
NZ_CP050177.1\|WP_167037995.1\|7542841_7543669_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|375319
NZ_CP050177.1\|WP_167035588.1\|7542016_7542730_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235914
NZ_CP050177.1\|WP_167035586.1\|7541348_7541966_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167037992.1\|7540277_7541084_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226765
NZ_CP050177.1\|WP_167035582.1\|7539687_7540173_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167035577.1\|7533393_7534662_+\|lectin	unknown	unknown	gnl\|CDD\|185693
NZ_CP050177.1\|WP_167035571.1\|7530987_7531566_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP050177.1\|WP_167035567.1\|7527747_7529262_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050177.1\|WP_167035590.1\|7548180_7548474_-\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|377587
NZ_CP050177.1\|WP_167035580.1\|7538553_7539441_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187572

Protein	Function_ID	Function_description	E-value
NZ_CP050177.1\|WP_167035573.1\|7531562_7531925_-\|DUF1304-domain-containing-protein	gnl\|CDD\|377753	pfam06993, DUF1304, Protein of unknown function (DUF1304). This family consists of several hypothetical bacterial proteins of around 120 residues in length. The function of this family is unknown.	1.21699e-36
NZ_CP050177.1\|WP_167037989.1\|7534667_7536056_+\|chitinase	gnl\|CDD\|119360	cd06543, GH18_PF-ChiA-like, PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.	4.89206e-103
NZ_CP050177.1\|WP_167035593.1\|7548552_7550478_-\|hypothetical-protein	gnl\|CDD\|223039	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional.	7.96485e-09
NZ_CP050177.1\|WP_167035575.1\|7532172_7532970_-\|ribonuclease	gnl\|CDD\|225231	COG2356, EndA, Endonuclease I [DNA replication, recombination, and repair].	7.82963e-49
NZ_CP050177.1\|WP_167035579.1\|7536133_7538344_+\|RICIN-domain-containing-protein	gnl\|CDD\|379501	pfam14200, RicinB_lectin_2, Ricin-type beta-trefoil lectin domain-like.	2.3128e-19
NZ_CP050177.1\|WP_167035569.1\|7529321_7530785_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	5.5612e-29
NZ_CP050177.1\|WP_167037997.1\|7543715_7548110_-\|AAA-family-ATPase	gnl\|CDD\|274860	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain. This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking].	2.14815e-173
NZ_CP050177.1\|WP_167035565.1\|7526382_7527504_-\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	1.01983e-12
NZ_CP050177.1\|WP_167037995.1\|7542841_7543669_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	6.0693e-39
NZ_CP050177.1\|WP_167035588.1\|7542016_7542730_-\|SDR-family-oxidoreductase	gnl\|CDD\|235914	PRK07041, PRK07041, SDR family oxidoreductase.	2.04209e-79
NZ_CP050177.1\|WP_167037992.1\|7540277_7541084_-\|hypothetical-protein	gnl\|CDD\|226765	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown].	1.0143e-14
NZ_CP050177.1\|WP_167035577.1\|7533393_7534662_+\|lectin	gnl\|CDD\|185693	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.	2.19218e-100
NZ_CP050177.1\|WP_167035571.1\|7530987_7531566_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.19044e-06
NZ_CP050177.1\|WP_167035590.1\|7548180_7548474_-\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|377587	pfam06013, WXG100, Proteins of 100 residues with WXG. ESAT-6 is a small protein appears to be of fundamental importance in virulence and protective immunity in Mycobacterium tuberculosis. homologs have been detected in other Gram-positive bacterial species. It may represent a novel secretion system potentially driven by the pfam01580 domains in the YukA-like proteins.	6.03969e-09
NZ_CP050177.1\|WP_167035580.1\|7538553_7539441_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187572	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7. This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.74513e-59

>NZ_CP050177.1|WP_167035580.1|7538553_7539441_+|NAD-dependent-epimerase/dehydratase-family-protein
MSVTKVFLTGGSGYVGRPTVAALLRRGIAVTALARSAESARTLSTLGAEPVRGALTDTAVLREAASRADGVIHLGSDASPGGDQVDREAAEALLDGVGAGPYVHTGGAWVYGDTDGVADEEKTQQPPAITAWRKANEDLVLARAATGGHPVLVMPGVVYGHGAGLIDMFYTAPARERGAAPVIGDGRNHWGVVHVDDIAELYALALGAPAGAVYIGVSDEAPTQAEVAAAAAEAAGHPGRTESLTLEAGLERMGPIAEAFALNQRLTGARARRETGWQPRHVDDALTEIAHPTQA
>NZ_CP050177.1|WP_167035579.1|7536133_7538344_+|RICIN-domain-containing-protein
MTTLLVAAASLCTALVALPAQAAPSSAPQAAPKAAQAAAALPTGWVNIVNKGSGKCVDAAAAGTANGTAVQQYACNGTTAQNWSLTDTGSGRVRVGNRNSANQVWDVKDVSTADSAAIQLWLYSSGLNQQWQPVEEADGAYHFVNGNSGKCLDVPAASTADGVVLGQYTCNGSAAQSFRLTAADTPPPAGTPDLGPNVQVFDPSMPSATIQSRVDAVFRQQETNQFGTQRQAFLFRPGNYNNVNVNVGFYTQVAGLGLSPDDVNIGGTVHVEADWFPPQNATQNFWRSAENLSVTPPSGTDRWAVSQAAPYRRMHVRGNLALDDGGWASGGFMADSKVDGQVRSGTQQQWLSRNTEWGSWTGQNWNMVFVGAKNAPAGTFPNPPYTTVATTPQIREKPFLYVDAAGAYKVFVPALRSNSSGTTWSAGAPAGTSLPLDQFYIAKPGASAADMNAALAAGKNLLVTPGVYHLNQTLRVTRPDTVVLGLGLATFIPDNGITAVSVSDVDGVKVAGLLIDAGPVNSQRLMEVGADGSNVSHAANPTSLHDVFFRIGGAGVGKATTSLVVNSRNVIGDHMWIWRADHGSGVGWTTNTADTGLIVNGADVTMYGLFVEHYQKHQTIWNGNGGKTYFYQNEMPYDPPNQAAWMNGSTQGYAAYKVANTVTSHEAYGLGSYCFFNVNNGVTAEHAFEVPNNANVKFRNMVTVSLGGVGTIRHVINDRGGPSNSSTNVANLVSYP
>NZ_CP050177.1|WP_167037989.1|7534667_7536056_+|chitinase
MRSFLKPLAVLAALPLAVGASVISTSTPAAAATGTITGLGGKCVDVAAASSANGTAVQLYDCNGSAAQQWTVGTDGTVRALGKCLDVKDGSVANGGQLQIWDCTGAANQKWTASAARDLVNTQANKCLDATGNSSANGTRLQIWTCTGTANQKWTAPAAGGGGGDTPPPAPGAMAVAPYLYNGWGNTPNPVTVMNATGVKWFTLAFVLSNGYCNPQWDGGRALTGGVDQQTVNSVRAAGGDIIPSFGGYSGNKLESSCSSAGELAAAYQKVINAYSLKAIDIDLEAAAYDNPTVQQRTIDALKTVKANNPGIKVYITIGTGINGPDTSLINRGAAAGLTVDSWTIMPFDFGGAGQNMGTLTLRAAEGLKTAVKNAYGYSDDTTYRRIGISSMNGITDVNETVTVADFRTILAYAQQHHLARLTFWSANRDRPCPGAYPNDDTCSGVSQQAWDFTRTFAQYAG
>NZ_CP050177.1|WP_167035577.1|7533393_7534662_+|lectin
MTVRTPLRRRMALYGLALLCCASAVAAGPATVAGAAPAPAPAAAAAVVFNDDFNGPAGSGVDGSKWQLETGDNVNNHERQYYTSGTNNAALDGAGNLVIQARRENPNNYQCWYGRCEYTSARLNTAGKFSAQYGRVESRIKIPRGQGIWPAFWMLGNGGGGWPAQGEIDVMENVGFEPSTVHGTLHGPGYSGAEGIGAGYTLPGGQQFADAFHTFAIDWAPDSITWSVDGNVYQRRTPADLGGDSWVFNKSFFMILNLAVGGYWPGDPNGSTVLPQYMVIDYVRVTTGDTGTPGTGRAIRGLGGKCVDVAAASSANGTPVQLYDCNGSAAQQWTVGSDGTIRALGKCLDVKDGSVADGAQLQIWDCTGANNQKWATPAALDVVNIQANKCLDVPAANSANGTRLQIYTCNGSAAQKWTVNAS
>NZ_CP050177.1|WP_167035575.1|7532172_7532970_-|ribonuclease
MVRRRHTARHALLALCAVTAVLATTTAAAPAATPRAALDDTYYQNALGKSGPQLRTALHSIIRNQTKISYAAVWEALKVTDEDPANRSNVILLYTGKSQSKASNGGNAGNWNREHVWAQSHGGFGTSAGPGTDIHHLRPSEVGVNSTRGNKDFDLGGGAVAGAPGNYTDSDSFEPRNAVKGDVARMILYMAVRYEGDDAWADLEANDRVNNGSTPFMGKLSVLKRWNEQDPPDTFEKRRNDVIYTSYQHNRNPFVDHPEWVESIW
>NZ_CP050177.1|WP_167035573.1|7531562_7531925_-|DUF1304-domain-containing-protein
MQTAAHILVGLLAALHVYILVLEMFLWEGAKGRELSGFDADMAKATAPLAANQGLYNGFLAAGLIWGLIVSDPTGFRVQVFFTICVTVAGLYGGLTANRRILFVQALPGAVALAVVLAAG
>NZ_CP050177.1|WP_167035571.1|7530987_7531566_-|TetR/AcrR-family-transcriptional-regulator
MTAGPSADAGDPRTARTRARLRQALLDACAEQPFEEIGVAALARRAGLGRATFYLHYPDLQALAVDACAEVVRDAVDALHAWRGAPDPRTPPPPLTAFFVGLTPHAALYRTLLRPGGGGPLGELLHRELRERAKAERVLAGAPAPDLIASAVAAAFAGVLADWLHGLVEDTPEGIATRVWRLLVALHRMPVE
>NZ_CP050177.1|WP_167035569.1|7529321_7530785_-|SpoIIE-family-protein-phosphatase
MPSPLFADRPAPQPPERGSVDALITQTRRLRGDVDAVRRDASAEADDDDILRRWQRALCDLAVHQLDDLGAHLDQLRAGRPDLTDDPHGTVPAQGRSAGPPAPRPAPLTGRVGSAEWNLLTDEVTWSDELYEIFGRPQEAGPLSLDELPSLLFPEDQALLTAMVTACLIDGRPIDGEFRVLTAQGRVRTLHMMGEPVLDTGGCTASMWAVLRDVSTLRRSERVLRDTRDSVHRRQHLAQTEQRLVAELQQAVLPTRGGALELSRSGAAALDVAARHLGGASAPTARGDWYDALDLPGGDTLMTVGDLTGQGVAAASNLAMLLGALRGMAVAGIEPGALLGHLNQLLETSRQPALGSALCARYRPDTATLVWAQAANPAPLLFRDGTGRALTPPDGVLLGATTGAAYEQADLRLLPGDVLVLHTDGEGRAGTEARQNHLLALAPLLTRARTARECAETIVARLGGAGDTDDACVMVARSRGPEDRVDS
>NZ_CP050177.1|WP_167035567.1|7527747_7529262_+|hypothetical-protein
MSGEPNTRLSDLFGLAGWSKGELARLVNRQAAAMGHPQLATDTSRVRRWIDMGETPRDPVPRVLAALFTERLGRVVTIEDLGFDRSGRAGKRQEAGSADNPDGLPWAPERTAAVLTEFTGMDLMLNRRGLVGAGAALAAGSALSSAMHDWLHHDPVLSSDAPRLNAPLHADPAGFDRYEAAPIGSQEIEALERSVEVFRAWDASRGGGLQRKAVVGQLNEVGGMLAYRHPDHLQRRLWGVAANLAVLAGWMSHDVGLEPTAQKYFVIATHAAREGGDRPRAGEALSRAARQMIHLGRPDDALDLMKLARSGSGEEALPRTRAMLHTIEAWAQASLGRGQAMRRTLGEAEDLFVSDKGDVEPPSWMQMFDEADLHGMEALAFRTLADHEPSAAATAQRHARRALDLRVGGRQRSKIFDHISLASACFIADDPEQAATYARLALVSIRETSSLRTWDRLREMYRLTGQYADYGKVQDLREEIELSMPKGPGRPSVLGPARKTYGSA
>NZ_CP050177.1|WP_167035565.1|7526382_7527504_-|aminoglycoside-phosphotransferase-family-protein
MYTASSSVSAPPRSTRTVAPGSGPYLDPTNAPRRWAGAVKQPLSGRLDLSGPQGAQLRMAIASVHRICPEFNPVQVLRRSGRSVLLVGSTGRTTAVAKCLLDHSPVWTERFRHEIAAYRAFVRHRPPVRVPRLIAADPDNCTLVVERMPGRAAALARHPVEAPPRADVRAALGAIARLNTWRPPAGMFDAPLDYAARIARYHELGLFTDRDLGDLQKLLHGLAAGRQGAGQFCHGDALLSNILLSPAGPVLVDWEHAGWYLPGYDLATLWSVLGDAPVARRQISQLAQAPGPAARDAFLVNLMLVLTREIRMYETAVQRAMRDTQPPAPGAAPAASCAQSGLPTGEEQRLLLRRLHDDCAMARRAVRAAVGTR
>NZ_CP050177.1|WP_167035582.1|7539687_7540173_-|hypothetical-protein
MTAADDGGAGRPGGFEAATGDGPAPGGAPEVRAAEVRVAFGGLLQIRRLTHTGAGAPEAVPAAWERQRPVRAVALVLEAAGLAPSAVDAAGQPVATGFRVRAGERAGTVRVEWVGPPGGGAAQDEERALGRCASELTRLGWEALLYRGPRRRRFLEVEPLA
>NZ_CP050177.1|WP_167037992.1|7540277_7541084_-|hypothetical-protein
MSATEIPSGAVVRAVGPSRTRDGRPLGSIPLVREPFLSASRVPHVTFPSNSPARGSLRRAAVASALVLCGVAGLAACGKTVSVTDASPAPAAAATSAPASQPPAATAPSGQPSSNSGLQVVDSTAAQNGLTGNGGTVVGLAVQETPPKWVQLSAVTSPRLGSHLINVNQATLYRFDQDTAQPSQSNCAGDCAAKWPPVTVQEGGKAYLAGVDPSQVGAIRRPDGTIQVTVGGWPIYRFSGDSGPGDANGQGIGGTWFAVGPTGQKATP
>NZ_CP050177.1|WP_167035584.1|7541073_7541352_+|hypothetical-protein
MADIFIPGDELDDARQALSFVLDHIDIQANEFDFPAMFGPGLRNAAQNFDDKWNDGRERLQKQVKEIKKAMDSIADEFAKTDNDAASNLSDS
>NZ_CP050177.1|WP_167035586.1|7541348_7541966_+|hypothetical-protein
MRTAERFLVNVPASWTEADLTGEALARTRREALAATDDPRAKAAVNDMFRQGREISRAARKHGALYAAGTATQYEDGLFLAYAMVFAVSTPEGMELTLPLLSRQLGLSTVKHKVPADRVVSAVTLENVGRVARVTGTEETPLTADVKAKLLTMHTIMPVPGTTREYLVVTCASPNLPLKEEAYDLFDAITGTFRFVSADGTVVPL
>NZ_CP050177.1|WP_167035588.1|7542016_7542730_-|SDR-family-oxidoreductase
MTDAIIIGGGSGMGLALARTLLAEDMQVTIVGRSSDRLARARTELARPGHGRITTITADLGREEDVAGLFAQVERVEHVAVTAADATGVYGRTADVATATARAVVETKLLGAWLVGKHAAGRVTGSITFTSGINAYRPNGSNTIMAAANGALASLAYGLAIELAPVRVNVISPGWVDTPIWDQLGMDKQAAFAELAARLPARRVGTPDDIAQAFLSVMRNGFITGTVLHVDGGHRIT
>NZ_CP050177.1|WP_167037995.1|7542841_7543669_+|helix-turn-helix-transcriptional-regulator
MADFLRIRRGRIGPADVGLPTGPGARRTPGLRREELAALAGVSVDYYIRIEQGRETAPSDAVLGALARVLRLTADEHAHLLGLADQVAGRTPRRRPADARPAGPGLRLLLESVRPSPAYVLDDVNDVLAANPEGLALMPGLGDSPPGQRNTIRYTFLHAAARTLFADWGRVARNGVAHLRTAQLTAPERTAALVAELEAASGEFAALWRRHEVAAKRAGETAFRHPVIGPTTLANEVLRPVGEGQRLLIYQAPPGTAEHNALVLLAMTVEDVRTP
>NZ_CP050177.1|WP_167037997.1|7543715_7548110_-|AAA-family-ATPase
MNVSVRDPLAEGVSTTVVVDTEPSARAARFAAELARAVGHTEAGAEGTPAPDLYIGAERVDPEATLQVAGVRDGMDLGLGTPVLRDPEPEGRTELRLVSGPGAGTVFRLPPGEYDIGSGDGCRIRLAPGAPVVGARVRVALDGSGVLSVTGTSQLDGKTVSGDLPWREGSQLAVGDTLLELTVRNSAKAPLTPAADGLGLEFNRPPRFFPSPAASRFRLPAPPVKPDKRPIPLLPILLLPAASAAIAIFVTHRWTFVFLALLSPVAALLTQFGGRKQAMLKYLEQEQKHSETMTRLRADIDAAVLAEQHNLRLSLPDPASLLRMAAQPSERLWERRWQDPDFLDVRVGTADLPSSLGVEDPTLDEHRRSTVPWLNQVPVAVPLRRAGVAGIAGPGAGRLAGWMAAQAASLHSPADLRIVVLGGPDGERDWSWTRWLPHGRPANEDTYSLVGSTADSLARRIGELGQIVSARVAAGTELVRGGVNGHPDILVVLDQARRARSLPGVIALLRDGPSVGVYTICMDREERLLPEECGAVVVTQGSPRGGSRVRTGVGAALEDVRTDSPEADWYEHLARALAPLRGVGDADESALPASVRLLDLLNVEPPTAEAIVAGWSLGGRSTRAVLGTGYDGDFSVDLVRDGPHALIAGTTGSGKSELLQTLVATLAVVNRPDEMTFVLVDYKGGSAFAECADLPHTVGLVTDLDTRLVERALVSLGAELRRRETQLAQASAKDIEDYLDKRGRGGDVLPPLPRLLLVIDEFASMARELPDFISGLVNIAQRGRSLGIHLVLATQRPSGAVTADIRANTNLRIALRTTDTSESRDIIDAAEAGEISPANPGRAYARLGPSALLPFQAGRVGGRRPGGAMPADVEVPVRARAVSWQELGGPVRLRSGGGGGARATEAVTDLAVLTAAVAQASRLAEVPRQPSPWLPALPEVLEWTPSPAPKAFADRAAELPAVEYGMVDLPAQQSRTPLVFDLDRAGHLHIIGSPRSGRSQTLRTLAAALAQAHGAQDVHLYGIDCGNGALNALTALPHTGAVVDRNQTERLSRLLDRLTAELTYRQGVLGARGTADLAELRRMAEPAERLPHLVVLVDRFEVFEREYNAFDNGSYLERMVRLLRDGAGVGIHLVLAGDRVLGSSRFGGTTEDKIVLRMNDRADYSSVGVPTKAAPADAAPGRGLRTQDLSEAQIAVLGTDLSGTAQARFLSDLGAELTRREAEVPAERRARRLDVLPDRVTYREALALHTKRGAMRPLVAVGGDTLAGLGPDLADVPTFAVAGPPRTGRSTALLTVTRSALDAGAGVVVLAPRRSPLRDLAGRAGVAAVITETEVSVEEFRKVLGNVPEDNAVIVIDDAELFMGAEIDPDLALLARGGAGNGWGVVVAGNAESMSLSLAGWMGQVKRNRTGMLLSPQSLGDGEVIGTKLTRGLIGQAPQPGRGLLHLGDGTLLAVQVPGTVLED
>NZ_CP050177.1|WP_167035590.1|7548180_7548474_-|WXG100-family-type-VII-secretion-target
MPNFAVNSDETASASASLLNDFTSLQDKLTEVRGRVNQLLSQGYSTPAAQQKFQPFFEEFAKGFQQVNEGLQGISQYVKSVGEAFSQTDEQLGSNIG
>NZ_CP050177.1|WP_167035593.1|7548552_7550478_-|hypothetical-protein
MARRHTSGFEIVGMDADPTPGQPEEIDRLETRYRQIGDEADVARQFTQKGGGLESGRGAAIDSLKGVIGDLPDKLGKTVDSYHSAADAYRGYSPQLVQAQDMLDQAMDKAASVAGAAAQTVAPLPADATDEQKAQNKQQSDSKDAADQELTAAKRMAQDAKDLRDSAARECERVLDVAVSQAIPERNIFQKIADAFKDFPFIQILLGALIAITSIFFPVAGVLLGAALFAVNQIVAIGSGQFRLGDFLVGLLSFIPGGALLKGAGAIATKIAPGLLKAGAGVIKSATGSITKIADTLTTSKIGGGLLAGAGVKEAGKVVGDVTVKFGVESGKEAAVEKLNGDPLDAKAIFGGAAAVAGVGGLIKGAGIIRKGRGGGTEAGAAASPAAASPATAPAAAGSGAAGPAAAGSGAAGSGAAGAKSLGDRLRDAKDGALEQAGELVPEAAASAVKVGVAVSEGTSLGDAVTSEASNFIPTAPGTAHGTVHDRISGLIPTKTSKPEGSTPPSAHTGDAAAHTGDTSSTHTVTPAPTGDSSSSPSPDSAPNPEPSSPGPEPQDIPLPPSPPGSPTEPTGSPFGPPQSPTDSDGGFTTAPSSPVEEGGFTTAPSSPVEETASVTPPTPPGTPTPPTEPTPPATGTPPAP
>NZ_CP050177.1|WP_167035595.1|7550656_7552159_+|hypothetical-protein
MRNGARATRRQDAPTSRPAGRNGAATLTALVATILLALCAVLGAAGPGAAADGDGLIKVYVVKSPAQNGGTTDTLGSIAASTLGDPGRSDDIFTLNRGLAQPDGGALNNPADPLVPGWILRLPDDASGPDVQLAKEAGNQDSTAPGTGSGQAQNGTGRTQNGTGQAQNSTGGTAATDSGALVFPLAAVLAVAGAFLLALVTAGIVGRRRVARAARALAGWFRALGEPARRRRRRRQRRALAGRFASDTESVRRAYGVLEEFGGSGGREGTAVHAVRVDRAGVTAWLAVPDTASDPWKKLDGTRWRRAGTWPGGGLGESTAARSADPSACLVRVGTDDEGEPVFVDLSRLDGILSVTGDRAVSHDVVRGLLDEIARTRPDVPVTQLVGADGGSPFAVPPELTTRPADGAVRAVSPREGRAATGRGTVRAGAVRRPLKGLVVVSGAPAGREAAELLDLCGPGGAGWTALVCGEVGGAHWRWHAAAGGTVEIPVLGVRLTVPA

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP050177_2	2.1\|1464471\|40\|NZ_CP050177\|CRISPRCasFinder	1464471-1464510	40	NZ_CP050177.1	6978108-6978147	0	1.0
NZ_CP050177_4	4.1\|1632482\|15\|NZ_CP050177\|PILER-CR	1632482-1632496	15	NZ_CP050177.1	145659-145673	0	1.0
NZ_CP050177_4	4.1\|1632482\|15\|NZ_CP050177\|PILER-CR	1632482-1632496	15	NZ_CP050177.1	2887181-2887195	0	1.0
NZ_CP050177_5	5.2\|2101691\|15\|NZ_CP050177\|PILER-CR	2101691-2101705	15	NZ_CP050177.1	2075555-2075569	0	1.0
NZ_CP050177_21	21.1\|4492167\|16\|NZ_CP050177\|CRISPRCasFinder	4492167-4492182	16	NZ_CP050177.1	4688105-4688120	0	1.0
NZ_CP050177_21	21.1\|4492167\|16\|NZ_CP050177\|CRISPRCasFinder	4492167-4492182	16	NZ_CP050177.1	6805180-6805195	0	1.0
NZ_CP050177_29	29.1\|5881508\|41\|NZ_CP050177\|PILER-CR	5881508-5881548	41	NZ_CP050177.1	6978108-6978148	0	1.0
NZ_CP050177_20	20.1\|4457142\|40\|NZ_CP050177\|CRISPRCasFinder	4457142-4457181	40	NZ_CP050177.1	2897771-2897810	1	0.975
NZ_CP050177_26	26.1\|5697606\|35\|NZ_CP050177\|CRISPRCasFinder	5697606-5697640	35	NZ_CP050177.1	6978111-6978145	1	0.971
NZ_CP050177_26	26.1\|5697606\|35\|NZ_CP050177\|CRISPRCasFinder	5697606-5697640	35	NZ_CP050177.1	4480993-4481027	1	0.971
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	273995-274011	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	577258-577274	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	910528-910544	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	1021644-1021660	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	1761570-1761586	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	1886169-1886185	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	2193696-2193712	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	3089094-3089110	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	3522845-3522861	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	4326352-4326368	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	5345534-5345550	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	5402392-5402408	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	5524403-5524419	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	5544571-5544587	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	6015070-6015086	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	6542842-6542858	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	7015446-7015462	1	0.941
NZ_CP050177_35	35.2\|7015398\|17\|NZ_CP050177\|CRISPRCasFinder	7015398-7015414	17	NZ_CP050177.1	7037427-7037443	1	0.941
NZ_CP050177_2	2.1\|1464471\|40\|NZ_CP050177\|CRISPRCasFinder	1464471-1464510	40	NZ_CP050177.1	4480991-4481030	2	0.95
NZ_CP050177_9	9.2\|2286961\|31\|NZ_CP050177\|CRT	2286961-2286991	31	NZ_CP050177.1	2652722-2652752	2	0.935
NZ_CP050177_9	9.3\|2287024\|29\|NZ_CP050177\|CRT	2287024-2287052	29	NZ_CP050177.1	2075555-2075583	2	0.931
NZ_CP050177_9	9.3\|2287024\|29\|NZ_CP050177\|CRT	2287024-2287052	29	NZ_CP050177.1	7558032-7558060	2	0.931
NZ_CP050177_21	21.9\|4492640\|22\|NZ_CP050177\|CRISPRCasFinder	4492640-4492661	22	NZ_CP050177.1	4875409-4875430	2	0.909
NZ_CP050177_22	22.1\|4505163\|36\|NZ_CP050177\|CRISPRCasFinder	4505163-4505198	36	NZ_CP050177.1	2897960-2897995	2	0.944
NZ_CP050177_28	28.4\|5803150\|36\|NZ_CP050177\|CRISPRCasFinder	5803150-5803185	36	NZ_CP050177.1	1889466-1889501	2	0.944
NZ_CP050177_29	29.1\|5881508\|41\|NZ_CP050177\|PILER-CR	5881508-5881548	41	NZ_CP050177.1	4480990-4481030	2	0.951
NZ_CP050177_30	30.2\|5935558\|34\|NZ_CP050177\|CRISPRCasFinder	5935558-5935591	34	NZ_CP050177.1	6117706-6117739	2	0.941
NZ_CP050177_32	32.1\|6631373\|29\|NZ_CP050177\|PILER-CR	6631373-6631401	29	NZ_CP050177.1	7196135-7196163	2	0.931
NZ_CP050177_32	32.2\|6631442\|21\|NZ_CP050177\|PILER-CR	6631442-6631462	21	NZ_CP050177.1	7557978-7557998	2	0.905

1. spacer 2.1|1464471|40|NZ_CP050177|CRISPRCasFinder matches to position: 6978108-6978147, mismatch: 0, identity: 1.0

atctttgaccgcaacggtcccgcccgaccgcaaccccctc	CRISPR spacer
atctttgaccgcaacggtcccgcccgaccgcaaccccctc	Protospacer
****************************************

2. spacer 4.1|1632482|15|NZ_CP050177|PILER-CR matches to position: 145659-145673, mismatch: 0, identity: 1.0

ccggggccggtgggc	CRISPR spacer
ccggggccggtgggc	Protospacer
***************

3. spacer 4.1|1632482|15|NZ_CP050177|PILER-CR matches to position: 2887181-2887195, mismatch: 0, identity: 1.0

ccggggccggtgggc	CRISPR spacer
ccggggccggtgggc	Protospacer
***************

4. spacer 5.2|2101691|15|NZ_CP050177|PILER-CR matches to position: 2075555-2075569, mismatch: 0, identity: 1.0

gcccgagccacaccc	CRISPR spacer
gcccgagccacaccc	Protospacer
***************

5. spacer 21.1|4492167|16|NZ_CP050177|CRISPRCasFinder matches to position: 4688105-4688120, mismatch: 0, identity: 1.0

cgcggcccgccgcgcg	CRISPR spacer
cgcggcccgccgcgcg	Protospacer
****************

6. spacer 21.1|4492167|16|NZ_CP050177|CRISPRCasFinder matches to position: 6805180-6805195, mismatch: 0, identity: 1.0

cgcggcccgccgcgcg	CRISPR spacer
cgcggcccgccgcgcg	Protospacer
****************

7. spacer 29.1|5881508|41|NZ_CP050177|PILER-CR matches to position: 6978108-6978148, mismatch: 0, identity: 1.0

atctttgaccgcaacggtcccgcccgaccgcaaccccctcc	CRISPR spacer
atctttgaccgcaacggtcccgcccgaccgcaaccccctcc	Protospacer
*****************************************

8. spacer 20.1|4457142|40|NZ_CP050177|CRISPRCasFinder matches to position: 2897771-2897810, mismatch: 1, identity: 0.975

gtttgtgcgtcggccggtcgcgcgggcgcggctcaccgat	CRISPR spacer
gtttgcgcgtcggccggtcgcgcgggcgcggctcaccgat	Protospacer
*****.**********************************

9. spacer 26.1|5697606|35|NZ_CP050177|CRISPRCasFinder matches to position: 6978111-6978145, mismatch: 1, identity: 0.971

tttgaccgcaacggtcacgcccgaccgcaaccccc	CRISPR spacer
tttgaccgcaacggtcccgcccgaccgcaaccccc	Protospacer
**************** ******************

10. spacer 26.1|5697606|35|NZ_CP050177|CRISPRCasFinder matches to position: 4480993-4481027, mismatch: 1, identity: 0.971

tttgaccgcaacggtcacgcccgaccgcaaccccc	CRISPR spacer
tttgaccgcaacggtcacgcccgaccgcaacctcc	Protospacer
********************************.**

11. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 273995-274011, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccggccgccgacc	Protospacer
******* *********

12. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 577258-577274, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggctcgcccgccgacc	Protospacer
****.************

13. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 910528-910544, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccgcccgccggcc	Protospacer
**************.**

14. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 1021644-1021660, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccgcccgcccacc	Protospacer
************* ***

15. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 1761570-1761586, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccgcccgcagacc	Protospacer
************ ****

16. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 1886169-1886185, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccgcccgccggcc	Protospacer
**************.**

17. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 2193696-2193712, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccgcccgtcgacc	Protospacer
***********.*****

18. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 3089094-3089110, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cgtcccgcccgccgacc	Protospacer
** **************

19. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 3522845-3522861, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccggccgccgacc	Protospacer
******* *********

20. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 4326352-4326368, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggaccgcccgccgacc	Protospacer
*** *************

21. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 5345534-5345550, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcctgcccgccgacc	Protospacer
*****.***********

22. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 5402392-5402408, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cgccccgcccgccgacc	Protospacer
** **************

23. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 5524403-5524419, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccgctcgccgacc	Protospacer
********.********

24. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 5544571-5544587, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccgcccgccggcc	Protospacer
**************.**

25. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 6015070-6015086, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cgacccgcccgccgacc	Protospacer
**.**************

26. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 6542842-6542858, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccggccgccgacc	Protospacer
******* *********

27. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 7015446-7015462, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcccgctcgccgacc	Protospacer
********.********

28. spacer 35.2|7015398|17|NZ_CP050177|CRISPRCasFinder matches to position: 7037427-7037443, mismatch: 1, identity: 0.941

cggcccgcccgccgacc	CRISPR spacer
cggcctgcccgccgacc	Protospacer
*****.***********

29. spacer 2.1|1464471|40|NZ_CP050177|CRISPRCasFinder matches to position: 4480991-4481030, mismatch: 2, identity: 0.95

atctttgaccgcaacggtcccgcccgaccgcaaccccctc	CRISPR spacer
atctttgaccgcaacggtcacgcccgaccgcaacctcctc	Protospacer
******************* ***************.****

30. spacer 9.2|2286961|31|NZ_CP050177|CRT matches to position: 2652722-2652752, mismatch: 2, identity: 0.935

gcaacggtcacgcccgaccgcaaccccctca	CRISPR spacer
gcaacgggcaggcccgaccgcaaccccctca	Protospacer
******* ** ********************

31. spacer 9.3|2287024|29|NZ_CP050177|CRT matches to position: 2075555-2075583, mismatch: 2, identity: 0.931

cgcacgggcaacgggcccgagccaacccc	CRISPR spacer
cgcacgggcaacgggcccgagccacaccc	Protospacer
************************  ***

32. spacer 9.3|2287024|29|NZ_CP050177|CRT matches to position: 7558032-7558060, mismatch: 2, identity: 0.931

cgcacgggcaacgggcccgagccaacccc	CRISPR spacer
cgcacgggcaacgggcccgagccatctcc	Protospacer
************************ *.**

33. spacer 21.9|4492640|22|NZ_CP050177|CRISPRCasFinder matches to position: 4875409-4875430, mismatch: 2, identity: 0.909

gcgcgcccgcgtgcccgccgac	CRISPR spacer
gcgcgcccgcgtggtcgccgac	Protospacer
************* .*******

34. spacer 22.1|4505163|36|NZ_CP050177|CRISPRCasFinder matches to position: 2897960-2897995, mismatch: 2, identity: 0.944

tctttgacccgcacgggcaacgggcccgggccacat	CRISPR spacer
tctttgacccgcacgggcaacgggcccgagccccat	Protospacer
****************************.*** ***

35. spacer 28.4|5803150|36|NZ_CP050177|CRISPRCasFinder matches to position: 1889466-1889501, mismatch: 2, identity: 0.944

ggatgtcctcaaacgccggacgggctggatgtggcg	CRISPR spacer
ggttgtcctcaaacgccggacgggcttgatgtggcg	Protospacer
** *********************** *********

36. spacer 29.1|5881508|41|NZ_CP050177|PILER-CR matches to position: 4480990-4481030, mismatch: 2, identity: 0.951

atctttgaccgcaacggtcccgcccgaccgcaaccccctcc	CRISPR spacer
atctttgaccgcaacggtcacgcccgaccgcaacctcctcc	Protospacer
******************* ***************.*****

37. spacer 30.2|5935558|34|NZ_CP050177|CRISPRCasFinder matches to position: 6117706-6117739, mismatch: 2, identity: 0.941

ggattgttgcgcccgttgtcccgtgcgggtcaaa	CRISPR spacer
ggattgttgcgcccgttgttccgtgcggctcaaa	Protospacer
*******************.******** *****

38. spacer 32.1|6631373|29|NZ_CP050177|PILER-CR matches to position: 7196135-7196163, mismatch: 2, identity: 0.931

gagggggttgcggtcgggtcgtgaccttg	CRISPR spacer
gaaggggttgcggtcgggtcgtgaccgtg	Protospacer
**.*********************** **

39. spacer 32.2|6631442|21|NZ_CP050177|PILER-CR matches to position: 7557978-7557998, mismatch: 2, identity: 0.905

gatgtggctcgggcccgatga	CRISPR spacer
gaagtggctcgggctcgatga	Protospacer
** ***********.******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	317531-317555	2	0.92
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	237990-238014	2	0.92
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP011869	Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence	184072-184096	2	0.92
NZ_CP050177_21	21.9\|4492640\|22\|NZ_CP050177\|CRISPRCasFinder	4492640-4492661	22	NZ_CP045120	Rubrobacter sp. SCSIO 52909 plasmid unnamed1, complete sequence	83294-83315	2	0.909
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	684689-684713	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	852610-852634	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP020371	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence	94964-94988	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	CP000385	Mycobacterium sp. MCS Plasmid1, complete sequence	34834-34858	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	630630-630654	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NC_008704	Mycobacterium sp. KMS plasmid pMKMS02, complete sequence	59468-59492	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	KT221034	Streptomyces phage SF3, complete genome	27508-27532	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1542309-1542333	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NC_008703	Mycobacterium sp. KMS plasmid pMKMS01, complete sequence	155505-155529	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP023713	Rhodococcus ruber strain YC-YT1 plasmid unnamed2, complete sequence	51729-51753	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	MG962374	Mycobacterium phage Paola, complete genome	49142-49166	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	MH051255	Mycobacterium phage Leston, complete genome	49259-49283	3	0.88
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	MF185720	Mycobacterium phage Guillsminger, complete genome	49142-49166	3	0.88
NZ_CP050177_21	21.6\|4492485\|24\|NZ_CP050177\|CRISPRCasFinder	4492485-4492508	24	CP000877	Herpetosiphon aurantiacus DSM 785 plasmid pHAU02, complete sequence	31639-31662	3	0.875
NZ_CP050177_21	21.6\|4492485\|24\|NZ_CP050177\|CRISPRCasFinder	4492485-4492508	24	NZ_CP040763	Paracoccus sp. 2251 plasmid unnamed4, complete sequence	94852-94875	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	CP021184	Sphingomonas wittichii DC-6 plasmid pDC03, complete sequence	29469-29492	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP020899	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence	149479-149502	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP006989	Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence	138862-138885	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013554	Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence	140555-140578	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013588	Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence	133413-133436	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013577	Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence	138301-138324	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013549	Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence	138671-138694	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013529	Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence	139685-139708	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013534	Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence	138671-138694	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013539	Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence	142704-142727	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013545	Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence	138665-138688	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013565	Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence	140555-140578	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013582	Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence	139685-139708	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP013571	Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence	138301-138324	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP021126	Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence	155679-155702	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	CP007642	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence	144207-144230	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NC_010998	Rhizobium etli CIAT 652 plasmid pA, complete sequence	138013-138036	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	10550-10573	3	0.875
NZ_CP050177_21	21.8\|4492590\|24\|NZ_CP050177\|CRISPRCasFinder	4492590-4492613	24	NZ_CP043960	Streptomyces tendae strain 139 plasmid unnamed1, complete sequence	379092-379115	3	0.875
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	MT701593	Streptomyces phage Sycamore, complete genome	16958-16982	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP013856	Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence	24185-24209	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP018075	Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence	137445-137469	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1314786-1314810	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	172722-172746	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	KJ174157	Mycobacterium phage Soto, complete genome	20776-20800	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	498290-498314	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	95851-95875	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	461786-461810	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	393324-393348	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	344172-344196	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	MT740747	Ralstonia phage Simangalove, complete genome	6153-6177	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	MT740744	Ralstonia phage Jenny, complete genome	5729-5753	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	MT740735	Ralstonia phage Elie, complete genome	6136-6160	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	MT740746	Ralstonia phage Sarlave, complete genome	16549-16573	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	MT740725	Ralstonia phage Adzire, complete genome	6003-6027	3	0.88
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	335444-335468	3	0.88
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NC_009475	Bradyrhizobium sp. BTAi1 plasmid pBBta01, complete sequence	12713-12737	3	0.88
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	DQ372923	Bacteriophage mu1/6, complete genome	14680-14704	3	0.88
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NC_007967	Streptomyces phage mu1/6, complete genome	14680-14704	3	0.88
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	143059-143083	3	0.88
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	106128-106152	3	0.88
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NC_019407	Caulobacter phage CcrMagneto, complete genome	121770-121794	3	0.88
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_CP053565	Pseudonocardia sp. Gen01 plasmid unnamed1, complete sequence	21071-21095	3	0.88
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	195568-195599	4	0.875
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP015530	Rhodococcus sp. WB1 plasmid pWB1, complete sequence	99189-99213	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP020556	Streptomyces sp. Sge12 plasmid pSGE, complete sequence	77326-77350	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP019036	Massilia putida strain 6NM-7 plasmid unnamed1, complete sequence	48993-49017	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NC_018583	Gordonia sp. KTR9 plasmid pGKT3, complete sequence	31793-31817	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP049319	Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence	162680-162704	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	311593-311617	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP013632	Rhizobium sp. N324 plasmid pRspN324b, complete sequence	334073-334097	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP040722	Rhodococcus pyridinivorans strain YF3 plasmid unnamed3, complete sequence	62636-62660	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_LT960615	Hartmannibacter diazotrophicus strain E19T plasmid HDIAp1, complete sequence	4693-4717	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP039641	Azospirillum sp. TSH100 plasmid p2, complete sequence	18441-18465	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	MG707188	Pseudomonas phage TC7, partial genome	38320-38344	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	KM389226	UNVERIFIED: Pseudomonas phage F_MX1987sp/MX560 clone contig00002 genomic sequence	6668-6692	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NC_013697	Deftia phage phiW-14, complete genome	92915-92939	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NC_047756	Caulobacter phage Sansa, complete genome	54429-54453	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP014515	Frondihabitans sp. PAMC 28766 strain SR6 plasmid 2, complete sequence	92335-92359	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP049159	Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence	214248-214272	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_LR134452	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence	243587-243611	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP003988	Streptomyces sp. 769 plasmid pSGZL, complete sequence	175433-175457	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	3669-3693	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP045288	Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff1, complete sequence	76329-76353	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	136470-136494	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	CP041260	Curtobacterium flaccumfaciens pv. flaccumfaciens strain Cff1037 plasmid pCFF113, complete sequence	70746-70770	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP039433	Rhodococcus sp. SGAir0479 plasmid unnamed	64400-64424	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	90860-90884	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP016822	Rhodococcus sp. p52 plasmid pDF03, complete sequence	75069-75093	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP047236	Gordonia sp. JH63 plasmid pJH63-1, complete sequence	124807-124831	4	0.84
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	AX955019	Sequence 1 from Patent WO03093461	17029-17053	4	0.84
NZ_CP050177_21	21.6\|4492485\|24\|NZ_CP050177\|CRISPRCasFinder	4492485-4492508	24	NZ_CP025552	Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence	152928-152951	4	0.833
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP027239	Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence	186815-186839	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	770407-770431	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	505614-505638	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	35249-35273	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NC_018022	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence	384575-384599	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP034329	Tabrizicola piscis strain K13M18 plasmid unnamed1, complete sequence	91003-91027	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP010408	Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence	24130-24154	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP011665	Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence	215677-215701	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	712409-712433	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	524549-524573	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	237015-237039	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	386075-386099	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	472855-472879	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	204254-204278	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP023977	Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.2, complete sequence	64697-64721	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	93878-93902	4	0.84
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2246550-2246574	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NC_011143	Phenylobacterium zucineum HLK1 plasmid, complete sequence	255476-255500	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	984966-984990	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_LT900339	Gluconobacter oxydans 621H isolate WT-DSMZ plasmid 2	146838-146862	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NC_006672	Gluconobacter oxydans 621H plasmid pGOX1, complete sequence	146835-146859	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	283231-283255	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_CP015167	Acetobacter ascendens strain LMG 1590 plasmid unnamed3, complete sequence	38308-38332	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_CP037921	Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence	104262-104286	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	KY555147	Caulobacter phage Ccr34, complete genome	123482-123506	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	KY555145	Caulobacter phage Ccr29, complete genome	127395-127419	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	KY555143	Caulobacter phage Ccr2, complete genome	122862-122886	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NC_019410	Caulobacter phage CcrKarma, complete genome	123581-123605	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	KY555146	Caulobacter phage Ccr32, complete genome	123042-123066	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	KY555144	Caulobacter phage Ccr5, complete genome	122754-122778	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	KY555142	Caulobacter phage Ccr10, complete genome	122387-122411	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NC_019411	Caulobacter phage CcrSwift, complete genome	122336-122360	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_CP014675	Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence	11160-11184	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_CP043044	Gluconobacter thailandicus strain HD924 plasmid unnamed1, complete sequence	112543-112567	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NC_006910	Micromonospora rosaria strain SCC2095 plasmid pMR2, complete sequence	6949-6973	4	0.84
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	JX163858	Caulobacter phage phiCbK, complete genome	84794-84818	4	0.84
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP040822	Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence	36604-36635	5	0.844
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1448525-1448549	5	0.8
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4016639-4016663	5	0.8
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1737780-1737804	5	0.8
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	890979-891003	5	0.8
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1707178-1707202	5	0.8
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP035502	Sphingosinicella sp. BN140058 plasmid p1, complete sequence	47530-47554	5	0.8
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NC_023748	Mycobacterium phage SkiPole, complete genome	24659-24683	5	0.8
NZ_CP050177_24	24.1\|5356882\|28\|NZ_CP050177\|CRISPRCasFinder	5356882-5356909	28	NZ_CP018075	Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence	105775-105802	5	0.821
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	828600-828624	5	0.8
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NC_004808	Streptomyces rochei plasmid pSLA2-L DNA, complete sequence	204318-204342	5	0.8
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	121436-121460	5	0.8
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	87699-87723	5	0.8
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	CP049262	Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence	92537-92561	5	0.8
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_CP022158	Escherichia coli strain ABWA45 plasmid pABWA45_4, complete sequence	16488-16512	5	0.8
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	NZ_MF062700	Enterobacter cloacae strain T5282 plasmid pT5282-CTXM, complete sequence	28780-28804	5	0.8
NZ_CP050177_24	24.2\|5356939\|25\|NZ_CP050177\|CRISPRCasFinder	5356939-5356963	25	MH779514	Mycobacterium phage Paito, complete genome	30286-30310	5	0.8
NZ_CP050177_24	24.4\|5357047\|25\|NZ_CP050177\|CRISPRCasFinder	5357047-5357071	25	NZ_CP042998	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence	39775-39799	5	0.8
NZ_CP050177_8	8.1\|2174344\|28\|NZ_CP050177\|CRISPRCasFinder	2174344-2174371	28	NC_007491	Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence	80893-80920	6	0.786
NZ_CP050177_8	8.1\|2174344\|28\|NZ_CP050177\|CRISPRCasFinder	2174344-2174371	28	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	70485-70512	6	0.786
NZ_CP050177_8	8.1\|2174344\|28\|NZ_CP050177\|CRISPRCasFinder	2174344-2174371	28	NZ_CP022566	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence	171902-171929	6	0.786
NZ_CP050177_8	8.1\|2174344\|28\|NZ_CP050177\|CRISPRCasFinder	2174344-2174371	28	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	144697-144724	6	0.786
NZ_CP050177_9	9.2\|2286961\|31\|NZ_CP050177\|CRT	2286961-2286991	31	GU196281	Escherichia phage K1ind3, complete genome	18326-18356	6	0.806
NZ_CP050177_9	9.2\|2286961\|31\|NZ_CP050177\|CRT	2286961-2286991	31	NC_041898	Escherichia phage K1ind2, complete genome	17630-17660	6	0.806
NZ_CP050177_9	9.2\|2286961\|31\|NZ_CP050177\|CRT	2286961-2286991	31	MF158038	Shigella phage Sf11 SMD-2017, complete genome	14606-14636	6	0.806
NZ_CP050177_9	9.3\|2287024\|29\|NZ_CP050177\|CRT	2287024-2287052	29	NZ_CP040721	Rhodococcus pyridinivorans strain YF3 plasmid unnamed2, complete sequence	28125-28153	6	0.793
NZ_CP050177_9	9.3\|2287024\|29\|NZ_CP050177\|CRT	2287024-2287052	29	NZ_CP018064	Rhodococcus sp. 2G plasmid p1, complete sequence	247761-247789	6	0.793
NZ_CP050177_9	9.3\|2287024\|29\|NZ_CP050177\|CRT	2287024-2287052	29	NZ_CP038031	Rhodococcus ruber strain R1 plasmid unnamed1, complete sequence	25085-25113	6	0.793
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	64154-64185	6	0.812
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	NZ_CP053909	Hymenobacter sp. BRD128 plasmid unnamed1, complete sequence	20369-20397	6	0.793
NZ_CP050177_16	16.1\|3693917\|25\|NZ_CP050177\|CRISPRCasFinder	3693917-3693941	25	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	477583-477607	6	0.76
NZ_CP050177_21	21.7\|4492535\|29\|NZ_CP050177\|CRISPRCasFinder	4492535-4492563	29	NZ_CP045303	Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence	3372-3400	6	0.793
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	CP054935	Nocardiopsis flavescens strain NA01583 plasmid unnamed2, complete sequence	13957-13988	7	0.781
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	CP054935	Nocardiopsis flavescens strain NA01583 plasmid unnamed2, complete sequence	32313-32344	7	0.781
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	969588-969619	7	0.781
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NC_009959	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI05, complete sequence	12289-12320	7	0.781
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	571348-571379	7	0.781
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	228604-228635	7	0.781
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022191	Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence	132913-132944	7	0.781
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NC_009507	Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence	250763-250794	7	0.781
NZ_CP050177_12	12.1\|2672222\|31\|NZ_CP050177\|CRISPRCasFinder	2672222-2672252	31	AP022674	Sphingomonas sp. HMP9 plasmid pHMP9 DNA, complete sequence	26355-26385	7	0.774
NZ_CP050177_12	12.1\|2672222\|31\|NZ_CP050177\|CRISPRCasFinder	2672222-2672252	31	NZ_CP051543	Paracoccus sanguinis strain OM2164 plasmid pPspOM122, complete sequence	31690-31720	7	0.774
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1511382-1511410	7	0.759
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	NZ_CP033726	Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence	67930-67958	7	0.759
NZ_CP050177_21	21.7\|4492535\|29\|NZ_CP050177\|CRISPRCasFinder	4492535-4492563	29	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	451185-451213	7	0.759
NZ_CP050177_8	8.1\|2174344\|28\|NZ_CP050177\|CRISPRCasFinder	2174344-2174371	28	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1078142-1078169	8	0.714
NZ_CP050177_9	9.2\|2286961\|31\|NZ_CP050177\|CRT	2286961-2286991	31	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1250549-1250579	8	0.742
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	458769-458800	8	0.75
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NC_019959	Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence	153831-153862	8	0.75
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	837698-837729	8	0.75
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NC_023068	Streptomyces sp. F11 plasmid pFP12, complete sequence	14829-14860	8	0.75
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NC_047905	Streptomyces phage Attoomi, complete genome	26956-26987	8	0.75
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2255808-2255836	8	0.724
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	566388-566416	8	0.724
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	MH001453	Mycobacterium phage Adonis, complete genome	56632-56660	8	0.724
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	MT941682	Pseudomonas phage BUCT553, complete genome	3695-3723	8	0.724
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	NC_042031	Mycobacterium phage Anaya, complete sequence	57655-57683	8	0.724
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	KX641264	Mycobacterium phage LindNT, complete genome	56666-56694	8	0.724
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	NC_014459	Mycobacterium virus CrimD, complete genome	56600-56628	8	0.724
NZ_CP050177_15	15.1\|3550841\|29\|NZ_CP050177\|PILER-CR	3550841-3550869	29	MH077577	Mycobacterium phage AlishaPH, complete genome	53823-53851	8	0.724
NZ_CP050177_6	6.1\|2133063\|35\|NZ_CP050177\|CRISPRCasFinder	2133063-2133097	35	NC_023316	Streptomyces sp. 14R-10 plasmid pZL1, complete sequence	103358-103392	9	0.743
NZ_CP050177_9	9.2\|2286961\|31\|NZ_CP050177\|CRT	2286961-2286991	31	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	798667-798697	9	0.71
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP013856	Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence	6852-6883	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP031159	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence	184785-184816	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1384494-1384525	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1440655-1440686	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1306928-1306959	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	67076-67107	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1369109-1369140	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1305950-1305981	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1351367-1351398	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1351358-1351389	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1306920-1306951	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1306274-1306305	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1306911-1306942	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1384637-1384668	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	186874-186905	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1272758-1272789	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1384618-1384649	9	0.719
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1384603-1384634	9	0.719
NZ_CP050177_12	12.1\|2672222\|31\|NZ_CP050177\|CRISPRCasFinder	2672222-2672252	31	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	304019-304049	9	0.71
NZ_CP050177_5	5.1\|2101616\|32\|NZ_CP050177\|PILER-CR	2101616-2101647	32	NZ_CP015009	Aminobacter aminovorans strain KCTC 2477 plasmid pAA04, complete sequence	115408-115439	10	0.688
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	434994-435025	10	0.688
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP031159	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence	241132-241163	11	0.656
NZ_CP050177_11	11.1\|2427459\|32\|NZ_CP050177\|CRISPRCasFinder	2427459-2427490	32	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	269156-269187	11	0.656
NZ_CP050177_18	18.2\|3694703\|37\|NZ_CP050177\|CRISPRCasFinder	3694703-3694739	37	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	668248-668284	12	0.676

1. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 2, identity: 0.92

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtcgacagcaccgccgacggcac	Protospacer
******** ****** *********

2. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.92

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtccaccgcaccgacgacggccc	Protospacer
***** ***************** *

3. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP011869 (Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence) position: , mismatch: 2, identity: 0.92

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtcgacagcaccgccgacggcac	Protospacer
******** ****** *********

4. spacer 21.9|4492640|22|NZ_CP050177|CRISPRCasFinder matches to NZ_CP045120 (Rubrobacter sp. SCSIO 52909 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

gcgcgcccgcgtgcccgccgac	CRISPR spacer
ccgcgccctcgtgcccgccgac	Protospacer
 ******* *************

5. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
aagtcgaccgcaccaacgacggcac	Protospacer
  ************.**********

6. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
aagtcgaccgcaccaacgacggcac	Protospacer
  ************.**********

7. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP020371 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
atgtcgaccgcaacgacgacggcac	Protospacer
 .********** ************

8. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to CP000385 (Mycobacterium sp. MCS Plasmid1, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgtcgaccgccccgacgacgccac	Protospacer
 ********** ********* ***

9. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgtcaacctcaccgacgacggcac	Protospacer
 ****.*** ***************

10. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NC_008704 (Mycobacterium sp. KMS plasmid pMKMS02, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgtcgaccgccccgacgacgccac	Protospacer
 ********** ********* ***

11. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to KT221034 (Streptomyces phage SF3, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgtcgacctcaccgacgacggcgc	Protospacer
 ******** *************.*

12. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgtcaacctcaccgacgacggcac	Protospacer
 ****.*** ***************

13. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NC_008703 (Mycobacterium sp. KMS plasmid pMKMS01, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgtcgaccgccccgacgacgccac	Protospacer
 ********** ********* ***

14. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP023713 (Rhodococcus ruber strain YC-YT1 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgccgaccgcaccgaccacggcag	Protospacer
***.************* ******

15. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to MG962374 (Mycobacterium phage Paola, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ctgtcgaccgcgacgacgacggcac	Protospacer
*.*********. ************

16. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to MH051255 (Mycobacterium phage Leston, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ctgtcgaccgcgacgacgacggcac	Protospacer
*.*********. ************

17. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to MF185720 (Mycobacterium phage Guillsminger, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ctgtcgaccgcgacgacgacggcac	Protospacer
*.*********. ************

18. spacer 21.6|4492485|24|NZ_CP050177|CRISPRCasFinder matches to CP000877 (Herpetosiphon aurantiacus DSM 785 plasmid pHAU02, complete sequence) position: , mismatch: 3, identity: 0.875

cgccgcctgccgcgcagcggttac	CRISPR spacer
cgccgccagccgcgcagcggtgaa	Protospacer
******* ************* *

19. spacer 21.6|4492485|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.875

cgccgcctgccgcgcagcggttac	CRISPR spacer
cgccgcctgccgcgcggcggtgat	Protospacer
***************.***** *.

20. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to CP021184 (Sphingomonas wittichii DC-6 plasmid pDC03, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcgaagttcgcggcccgccgcgct	Protospacer
***** ***** ***********

21. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

22. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP006989 (Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

23. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013554 (Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

24. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013588 (Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

25. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013577 (Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

26. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013549 (Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

27. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013529 (Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

28. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013534 (Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

29. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013539 (Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

30. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013545 (Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

31. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013565 (Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

32. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013582 (Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

33. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013571 (Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

34. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP021126 (Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

35. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to CP007642 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

36. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gcaaattgcgccgcccgccgcgcc	Protospacer
**.**** ***************

37. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
gccaatttcaccgcccgccgcgcc	Protospacer
** ******.*************

38. spacer 21.8|4492590|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP043960 (Streptomyces tendae strain 139 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaatttcgccgcccgccgcgcg	CRISPR spacer
ccgaagttccccgcccgccgcgcg	Protospacer
 **** *** **************

39. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to MT701593 (Streptomyces phage Sycamore, complete genome) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
tacggccaccgtcgccccggccgct	Protospacer
. ********* *************

40. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013856 (Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
ccccgccaccggcgccccgcccgca	Protospacer
*** *************** ****

41. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP018075 (Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
cccgaccaccggcgccccgggcgcg	Protospacer
****.*************** ***

42. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccacccgcgcccccgccgcc	Protospacer
********** ******* *****.

43. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccagcggcgccacggccgca	Protospacer
******** ******* *******

44. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to KJ174157 (Mycobacterium phage Soto, complete genome) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccaccgccgccccggccacc	Protospacer
*********** **********.*.

45. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccacccgcgcccccgccgcc	Protospacer
********** ******* *****.

46. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
cgcggccaccggcgcgccggccgcc	Protospacer
* ************* ********.

47. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccaccgccgccgcggccgcc	Protospacer
*********** **** *******.

48. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccaccgccgccgcggccgcc	Protospacer
*********** **** *******.

49. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
gccggccaccggcctcccggccgct	Protospacer
 ************ .**********

50. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to MT740747 (Ralstonia phage Simangalove, complete genome) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
gccgggcaccggcgccccgggcgct	Protospacer
 **** ************** ****

51. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to MT740744 (Ralstonia phage Jenny, complete genome) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
gccgggcaccggcgccccgggcgct	Protospacer
 **** ************** ****

52. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to MT740735 (Ralstonia phage Elie, complete genome) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
gccgggcaccggcgccccgggcgct	Protospacer
 **** ************** ****

53. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to MT740746 (Ralstonia phage Sarlave, complete genome) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
gccgggcaccggcgccccgggcgct	Protospacer
 **** ************** ****

54. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to MT740725 (Ralstonia phage Adzire, complete genome) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
gccgggcaccggcgccccgggcgct	Protospacer
 **** ************** ****

55. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccaccggcgccccggccgct	CRISPR spacer
cccggcctccggcgccccagccggt	Protospacer
******* **********.**** *

56. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NC_009475 (Bradyrhizobium sp. BTAi1 plasmid pBBta01, complete sequence) position: , mismatch: 3, identity: 0.88

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgatccggccgcccccggccgc	Protospacer
******.*************.***

57. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to DQ372923 (Bacteriophage mu1/6, complete genome) position: , mismatch: 3, identity: 0.88

ccccgacccggccgcccccgaccga	CRISPR spacer
cctcgacccggccgcccccgtccgc	Protospacer
**.***************** ***

58. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NC_007967 (Streptomyces phage mu1/6, complete genome) position: , mismatch: 3, identity: 0.88

ccccgacccggccgcccccgaccga	CRISPR spacer
cctcgacccggccgcccccgtccgc	Protospacer
**.***************** ***

59. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 3, identity: 0.88

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgccgcccgc	Protospacer
**************** *** ***

60. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 3, identity: 0.88

ccccgacccggccgcccccgaccga	CRISPR spacer
caccgacccggccgccaccgacgga	Protospacer
* ************** ***** **

61. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NC_019407 (Caulobacter phage CcrMagneto, complete genome) position: , mismatch: 3, identity: 0.88

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccaa	Protospacer
**************** * ****.*

62. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP053565 (Pseudonocardia sp. Gen01 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacacggccgaccccgaccca	Protospacer
******* ****** ******** *

63. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.875

-ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
tggccgcc-gccggcgcccggcccgcgccccgg	Protospacer
 ****.** ***. *******************

64. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP015530 (Rhodococcus sp. WB1 plasmid pWB1, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtcgcccgcaccgacgacgggtg	Protospacer
****** ***************

65. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP020556 (Streptomyces sp. Sge12 plasmid pSGE, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
atgtcgcccgcaccgacgacggcaa	Protospacer
 .**** *****************

66. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP019036 (Massilia putida strain 6NM-7 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
tcgtccaccgcaccgaccacggcaa	Protospacer
.**** *********** ******

67. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NC_018583 (Gordonia sp. KTR9 plasmid pGKT3, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgccgaccgcactgacgacggcga	Protospacer
***.*********.*********.

68. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP049319 (Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgacgacagcaccgacgacggcgt	Protospacer
*** **** **************..

69. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtcgacctcaccggcgacggcgt	Protospacer
********* *****.*******..

70. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013632 (Rhizobium sp. N324 plasmid pRspN324b, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
aggtcgacagcaccggcgacggcac	Protospacer
  ****** ******.*********

71. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP040722 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtcgcccgcaccgacgacgagaa	Protospacer
****** **************. *

72. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_LT960615 (Hartmannibacter diazotrophicus strain E19T plasmid HDIAp1, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgacgaccgcaccgatgacggcaa	Protospacer
 ** ************.*******

73. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP039641 (Azospirillum sp. TSH100 plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
gggtcgacctcaccgacgccggcac	Protospacer
  ******* ******** ******

74. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to MG707188 (Pseudomonas phage TC7, partial genome) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgccgacggcaccgacgacggcat	Protospacer
 **.**** ***************.

75. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to KM389226 (UNVERIFIED: Pseudomonas phage F_MX1987sp/MX560 clone contig00002 genomic sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgccgacggcaccgacgacggcat	Protospacer
 **.**** ***************.

76. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NC_013697 (Deftia phage phiW-14, complete genome) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
tcgtcgaccgcaccggcgacggggc	Protospacer
.**************.****** .*

77. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NC_047756 (Caulobacter phage Sansa, complete genome) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
tcatcgaccgcaccgacgagggcaa	Protospacer
.*.**************** ****

78. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP014515 (Frondihabitans sp. PAMC 28766 strain SR6 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgtcgaccgcgccgacgacggtaa	Protospacer
 **********.**********.*

79. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP049159 (Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgacgacagcaccgacgacggcgt	Protospacer
*** **** **************..

80. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtcgaccgcaccgacgtcgaggc	Protospacer
****************** **. .*

81. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP003988 (Streptomyces sp. 769 plasmid pSGZL, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgacgaccgcaccgacgaccgctg	Protospacer
*** **************** **

82. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtccaccgcaccgacgaaggcgg	Protospacer
***** ************* ***.

83. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP045288 (Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff1, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
aggtcgaacgctccgacgacggcac	Protospacer
  ***** *** *************

84. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
acgtctaccgccccgacgacggcaa	Protospacer
 **** ***** ************

85. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to CP041260 (Curtobacterium flaccumfaciens pv. flaccumfaciens strain Cff1037 plasmid pCFF113, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
aggtcgaacgctccgacgacggcac	Protospacer
  ***** *** *************

86. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP039433 (Rhodococcus sp. SGAir0479 plasmid unnamed) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtcacccgcaccgacgacggctg	Protospacer
*****. ****************

87. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgccggccgcaccgacgacggcta	Protospacer
***.**.****************

88. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP016822 (Rhodococcus sp. p52 plasmid pDF03, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgtcgcccgcaccgacgacgagaa	Protospacer
****** **************. *

89. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP047236 (Gordonia sp. JH63 plasmid pJH63-1, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
ccgccgaccgcactgacgacggcga	Protospacer
***.*********.*********.

90. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to AX955019 (Sequence 1 from Patent WO03093461) position: , mismatch: 4, identity: 0.84

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
tcgtcgagcgcaccgccgacggcag	Protospacer
.****** ******* ********

91. spacer 21.6|4492485|24|NZ_CP050177|CRISPRCasFinder matches to NZ_CP025552 (Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.833

cgccgcctgccgcgcagcggttac	CRISPR spacer
cgccgcctgccgggcagcggtgct	Protospacer
************ ********  .

92. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccaccggcgccccggtgcgt	Protospacer
********************.   *

93. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccaccggcgccgtggccgtg	Protospacer
**************** .*****.

94. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
ccgggccaccggcgacccggccgaa	Protospacer
** *********** ********

95. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccaccgtcgccccggacggg	Protospacer
*********** ******** **

96. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
tccggccagcgtcgccccggccgcc	Protospacer
.******* ** ************.

97. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP034329 (Tabrizicola piscis strain K13M18 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
ctcggccaccggcgccacggccgtg	Protospacer
*.************** ******.

98. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP010408 (Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cccgggcaccggcgccctggccggc	Protospacer
***** ***********.***** .

99. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP011665 (Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cctggccaccggcgcccccgccgag	Protospacer
**.*************** ****

100. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cccggcgaccgccgccccggccggg	Protospacer
****** **** ***********

101. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
gccggccaccggcgcgccggcggcc	Protospacer
 ************** ***** **.

102. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
tccggccgccgccgccccggccgcg	Protospacer
.******.*** ************

103. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccaccgccgccccggacgag	Protospacer
*********** ******** **

104. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cctggccaccggcgcccccgccgag	Protospacer
**.*************** ****

105. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cccggcgaccggcggcccggccgag	Protospacer
****** ******* ********

106. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP023977 (Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.2, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
gtcgggcaccggcgccccggccgtt	Protospacer
 .*** *****************.*

107. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccacggccgccccggccgtc	Protospacer
********* * ***********..

108. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccaccggcgccccggccgct	CRISPR spacer
gcccgccaccggcgcgccggccgcc	Protospacer
 ** *********** ********.

109. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NC_011143 (Phenylobacterium zucineum HLK1 plasmid, complete sequence) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
catcgacccggccgcccccgacccg	Protospacer
* .******************** .

110. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
gcccgacccggccgtccgcgaccgc	Protospacer
 *************.** ******

111. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_LT900339 (Gluconobacter oxydans 621H isolate WT-DSMZ plasmid 2) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
cgccgacccggccgaccccgaccac	Protospacer
* ************ ********.

112. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NC_006672 (Gluconobacter oxydans 621H plasmid pGOX1, complete sequence) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
cgccgacccggccgaccccgaccac	Protospacer
* ************ ********.

113. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccggcccggccgccccagaccct	Protospacer
*****.************ ****

114. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP015167 (Acetobacter ascendens strain LMG 1590 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
cgccgacccggccgaccccgaccac	Protospacer
* ************ ********.

115. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP037921 (Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
gcccggcccggccgccccctaccgg	Protospacer
 ****.************* ****.

116. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to KY555147 (Caulobacter phage Ccr34, complete genome) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccac	Protospacer
**************** * ****.

117. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to KY555145 (Caulobacter phage Ccr29, complete genome) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccac	Protospacer
**************** * ****.

118. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to KY555143 (Caulobacter phage Ccr2, complete genome) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccac	Protospacer
**************** * ****.

119. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NC_019410 (Caulobacter phage CcrKarma, complete genome) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccac	Protospacer
**************** * ****.

120. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to KY555146 (Caulobacter phage Ccr32, complete genome) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccac	Protospacer
**************** * ****.

121. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to KY555144 (Caulobacter phage Ccr5, complete genome) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccac	Protospacer
**************** * ****.

122. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to KY555142 (Caulobacter phage Ccr10, complete genome) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccac	Protospacer
**************** * ****.

123. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NC_019411 (Caulobacter phage CcrSwift, complete genome) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccac	Protospacer
**************** * ****.

124. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP014675 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
cgccgacccggccgaccccgaccac	Protospacer
* ************ ********.

125. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP043044 (Gluconobacter thailandicus strain HD924 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
cgccgacccggccgaccccgaccac	Protospacer
* ************ ********.

126. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NC_006910 (Micromonospora rosaria strain SCC2095 plasmid pMR2, complete sequence) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccggcccggccggccccgacccg	Protospacer
*****.******** ******** .

127. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to JX163858 (Caulobacter phage phiCbK, complete genome) position: , mismatch: 4, identity: 0.84

ccccgacccggccgcccccgaccga	CRISPR spacer
ccccgacccggccgccgcagaccac	Protospacer
**************** * ****.

128. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP040822 (Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence) position: , mismatch: 5, identity: 0.844

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
ggacaccggcctccgcccggcccgcggggcgg	Protospacer
** ******** **************   ***

129. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
agtacgaccgcgccgacgacggcac	Protospacer
    *******.*************

130. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
tggtcgaccgcaccgacgacgtgtc	Protospacer
. *******************   *

131. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
agtacgaccgcgccgacgacggcac	Protospacer
    *******.*************

132. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
agtacgaccgcgccgacgacggcac	Protospacer
    *******.*************

133. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
agtacgaccgcgccgacgacggcac	Protospacer
    *******.*************

134. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP035502 (Sphingosinicella sp. BN140058 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
tgctcgaccgcaccgccgacggcaa	Protospacer
.  ************ ********

135. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NC_023748 (Mycobacterium phage SkiPole, complete genome) position: , mismatch: 5, identity: 0.8

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
gcgtcgaccgcaccggcgacggtgt	Protospacer
 **************.******...

136. spacer 24.1|5356882|28|NZ_CP050177|CRISPRCasFinder matches to NZ_CP018075 (Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence) position: , mismatch: 5, identity: 0.821

gaacccagctctcgcggacccagccgcc	CRISPR spacer
ggacgacgctctcgcggacacagccgcc	Protospacer
*.**   ************ ********

137. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 5, identity: 0.8

cccggccaccggcgccccggccgct	CRISPR spacer
ggcggcaaccggcgccccggccggc	Protospacer
  **** **************** .

138. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NC_004808 (Streptomyces rochei plasmid pSLA2-L DNA, complete sequence) position: , mismatch: 5, identity: 0.8

cccggccaccggcgccccggccgct	CRISPR spacer
cccggccaccggcgccccgatgccg	Protospacer
*******************..  *

139. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 5, identity: 0.8

cccggccaccggcgccccggccgct	CRISPR spacer
aacggccaccggcgccctggccgag	Protospacer
  ***************.*****

140. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.8

cccggccaccggcgccccggccgct	CRISPR spacer
cagcgccaccggcgccccggccggc	Protospacer
*   ******************* .

141. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to CP049262 (Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence) position: , mismatch: 5, identity: 0.8

cccggccaccggcgccccggccgct	CRISPR spacer
aaaggtcaccggcgccccggccgcc	Protospacer
   **.******************.

142. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022158 (Escherichia coli strain ABWA45 plasmid pABWA45_4, complete sequence) position: , mismatch: 5, identity: 0.8

cccggccaccggcgccccggccgct	CRISPR spacer
aaaggtcaccggcgccccggccgcc	Protospacer
   **.******************.

143. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to NZ_MF062700 (Enterobacter cloacae strain T5282 plasmid pT5282-CTXM, complete sequence) position: , mismatch: 5, identity: 0.8

cccggccaccggcgccccggccgct	CRISPR spacer
aaaggtcaccggcgccccggccgcc	Protospacer
   **.******************.

144. spacer 24.2|5356939|25|NZ_CP050177|CRISPRCasFinder matches to MH779514 (Mycobacterium phage Paito, complete genome) position: , mismatch: 5, identity: 0.8

cccggccaccggcgccccggccgct	CRISPR spacer
gccggccaccggcgccccgaccagc	Protospacer
 ******************.**. .

145. spacer 24.4|5357047|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP042998 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence) position: , mismatch: 5, identity: 0.8

ccccgacccggccgcccccgaccga	CRISPR spacer
ggacgaccccgccgcccccgaccgc	Protospacer
   ****** **************

146. spacer 8.1|2174344|28|NZ_CP050177|CRISPRCasFinder matches to NC_007491 (Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence) position: , mismatch: 6, identity: 0.786

cggtctcgccgcctccggcggcaaaggt	CRISPR spacer
atatctcgccttctccggcggcaaagat	Protospacer
  .******* .**************.*

147. spacer 8.1|2174344|28|NZ_CP050177|CRISPRCasFinder matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.786

cggtctcgccgcctccggcggcaaaggt	CRISPR spacer
cggcctcgccggctccggcggcatcgcg	Protospacer
***.******* ***********  *

148. spacer 8.1|2174344|28|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022566 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence) position: , mismatch: 6, identity: 0.786

cggtctcgccgcctccggcggcaaaggt	CRISPR spacer
ggcgctcgccgcctccggcgaaaaaggc	Protospacer
 *  ****************. *****.

149. spacer 8.1|2174344|28|NZ_CP050177|CRISPRCasFinder matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.786

cggtctcgccgcctccggcggcaaaggt	CRISPR spacer
atatctcgccttctccggcggcaaagat	Protospacer
  .******* .**************.*

150. spacer 9.2|2286961|31|NZ_CP050177|CRT matches to GU196281 (Escherichia phage K1ind3, complete genome) position: , mismatch: 6, identity: 0.806

gcaacggt----cacgcccgaccgcaaccccctca	CRISPR spacer
----cggtggcacacgcccgacagcaaccccgtca	Protospacer
    ****    ********** ******** ***

151. spacer 9.2|2286961|31|NZ_CP050177|CRT matches to NC_041898 (Escherichia phage K1ind2, complete genome) position: , mismatch: 6, identity: 0.806

gcaacggt----cacgcccgaccgcaaccccctca	CRISPR spacer
----cggtggcacacgcccgacagcaaccccgtca	Protospacer
    ****    ********** ******** ***

152. spacer 9.2|2286961|31|NZ_CP050177|CRT matches to MF158038 (Shigella phage Sf11 SMD-2017, complete genome) position: , mismatch: 6, identity: 0.806

gcaacggt-cacgcccgaccgcaaccccctca	CRISPR spacer
-cggcggcacacgcccgacagcaaccccatca	Protospacer
 *..***. ********** ******** ***

153. spacer 9.3|2287024|29|NZ_CP050177|CRT matches to NZ_CP040721 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

cgcacgggcaacgggcccgagccaacccc	CRISPR spacer
ggcaccggcaacgggcccgagccgaggac	Protospacer
 **** *****************.*   *

154. spacer 9.3|2287024|29|NZ_CP050177|CRT matches to NZ_CP018064 (Rhodococcus sp. 2G plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.793

cgcacgggcaacgggcccgagccaacccc	CRISPR spacer
ggcacaggcaacgggcccgagccgaggac	Protospacer
 ****.*****************.*   *

155. spacer 9.3|2287024|29|NZ_CP050177|CRT matches to NZ_CP038031 (Rhodococcus ruber strain R1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

cgcacgggcaacgggcccgagccaacccc	CRISPR spacer
ggcaccggcaacgggcccgagccgaggac	Protospacer
 **** *****************.*   *

156. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.812

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcgcaccggcccccgcccggccggcgcccgga	Protospacer
*  ******** ********** ****** *.

157. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to NZ_CP053909 (Hymenobacter sp. BRD128 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
tggcctcgggcaccacgaacccggcgtcg	Protospacer
 ************ ****** **** .*

158. spacer 16.1|3693917|25|NZ_CP050177|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.76

ccgtcgaccgcaccgacgacggcac	CRISPR spacer
tgttcgaccgcaccgacgacgggcg	Protospacer
.  *******************

159. spacer 21.7|4492535|29|NZ_CP050177|CRISPRCasFinder matches to NZ_CP045303 (Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

gcagatccgcgagagcggttacccgcagc	CRISPR spacer
gcagatccgcgagcgcggttatgccgaga	Protospacer
************* *******. *  **

160. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to CP054935 (Nocardiopsis flavescens strain NA01583 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
ggcgggtggcccccgccgggcccgcgccccgc	Protospacer
*** . .**** ***** *************

161. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to CP054935 (Nocardiopsis flavescens strain NA01583 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
ggcgggtggcccccgccgggcccgcgccccgc	Protospacer
*** . .**** ***** *************

162. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 7, identity: 0.781

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
cgccaccggcccccgccgggcccgtggtcctg	Protospacer
 ********** ***** ******.* .** *

163. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NC_009959 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI05, complete sequence) position: , mismatch: 7, identity: 0.781

ggccaccg-----gccaccgcccggcccgcgccccgg	CRISPR spacer
-----ccggttttgcccccgcccggcccgcgcccggg	Protospacer
     ***     *** ***************** **

164. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 7, identity: 0.781

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
cgccaccggcccccgccgggcccgtggtcctg	Protospacer
 ********** ***** ******.* .** *

165. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 7, identity: 0.781

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
cgccaccggcccccgccgggcccgtggtcctg	Protospacer
 ********** ***** ******.* .** *

166. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022191 (Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

-ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
tcgccg-cggccaccgcccggccctcggccagc	Protospacer
  ***. ***************** ** ** *

167. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NC_009507 (Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence) position: , mismatch: 7, identity: 0.781

ggccaccggccaccgcccgg-cccgcgccccgg	CRISPR spacer
ggccaactgccaccgcccggccccgcgtgtca-	Protospacer
***** * ************ ******. .*.

168. spacer 12.1|2672222|31|NZ_CP050177|CRISPRCasFinder matches to AP022674 (Sphingomonas sp. HMP9 plasmid pHMP9 DNA, complete sequence) position: , mismatch: 7, identity: 0.774

cggggccggtgggccgcgcggcttactagct	CRISPR spacer
cgaggccggtgggccgcgcggctacgacgcc	Protospacer
**.********************     **.

169. spacer 12.1|2672222|31|NZ_CP050177|CRISPRCasFinder matches to NZ_CP051543 (Paracoccus sanguinis strain OM2164 plasmid pPspOM122, complete sequence) position: , mismatch: 7, identity: 0.774

cggggccggtgggccgcgcggcttactagct--	CRISPR spacer
cggggcgggggggccgcgcggctcat--gccgg	Protospacer
****** ** *************.*.  **.

170. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.759

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
aggcctcgggcacgacgagcccgaacacg	Protospacer
******************.* **. . *

171. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to NZ_CP033726 (Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence) position: , mismatch: 7, identity: 0.759

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
cggcctcgggcgcgaagaacgcggtgtcg	Protospacer
 **********.*** ********. .*

172. spacer 21.7|4492535|29|NZ_CP050177|CRISPRCasFinder matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.759

gcagatccgcgagagcggttacccgcagc	CRISPR spacer
ccagatccgcgagcgcggttacgagatga	Protospacer
 ************ ********  *  *

173. spacer 8.1|2174344|28|NZ_CP050177|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.714

cggtctcgccgcctccggcggcaaaggt	CRISPR spacer
acgtctcgccgccgccggcggcaccctc	Protospacer
  *********** *********    .

174. spacer 9.2|2286961|31|NZ_CP050177|CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 8, identity: 0.742

gcaacggtcacgcccgaccgcaaccccctca	CRISPR spacer
atactaggcaggcccgaccgcaacccgctca	Protospacer
..* ..* ** *************** ****

175. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
cggcgccggccaccgccccgcccgctccacac	Protospacer
 * *.************* ****** ** *.

176. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NC_019959 (Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence) position: , mismatch: 8, identity: 0.75

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gatcaccggccaccgcccggcctgagcacgcc	Protospacer
*..*******************.* ** *

177. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

ggccaccg----gccaccgcccggcccgcgccccgg	CRISPR spacer
----accatgtcgccgccgccgggcccgcgccccgc	Protospacer
    ***.    ***.***** *************

178. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NC_023068 (Streptomyces sp. F11 plasmid pFP12, complete sequence) position: , mismatch: 8, identity: 0.75

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
tccaaccggtccccgcccggcccgcgcagcag	Protospacer
  * *****.* ***************  *.*

179. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NC_047905 (Streptomyces phage Attoomi, complete genome) position: , mismatch: 8, identity: 0.75

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
ttccttcagccaccgcccggcccgctccgcgt	Protospacer
  ** .*.***************** ** **

180. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.724

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
ttgcctcgggcacgacgagcgcgtcggag	Protospacer
  ****************.**** *

181. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.724

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
cggcctcgtgctcgacgaacgcggtgggg	Protospacer
 ******* ** ************.

182. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to MH001453 (Mycobacterium phage Adonis, complete genome) position: , mismatch: 8, identity: 0.724

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
cggcctcgtgcacgacgaacacggtcgag	Protospacer
 ******* ***********.***..

183. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to MT941682 (Pseudomonas phage BUCT553, complete genome) position: , mismatch: 8, identity: 0.724

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
ccgcatcgggcacgacgaaggcggcaggg	Protospacer
  ** ************** *****

184. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to NC_042031 (Mycobacterium phage Anaya, complete sequence) position: , mismatch: 8, identity: 0.724

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
cggcctcgtgcacgacgaacacggtcgag	Protospacer
 ******* ***********.***..

185. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to KX641264 (Mycobacterium phage LindNT, complete genome) position: , mismatch: 8, identity: 0.724

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
cggcctcgtgcacgacgaacacggtcgaa	Protospacer
 ******* ***********.***..

186. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to NC_014459 (Mycobacterium virus CrimD, complete genome) position: , mismatch: 8, identity: 0.724

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
cggcctcgtgcacgacgaacacggtcgag	Protospacer
 ******* ***********.***..

187. spacer 15.1|3550841|29|NZ_CP050177|PILER-CR matches to MH077577 (Mycobacterium phage AlishaPH, complete genome) position: , mismatch: 8, identity: 0.724

aggcctcgggcacgacgaacgcggctcct	CRISPR spacer
cggcctcgtgcacgacgaacacggtcgag	Protospacer
 ******* ***********.***..

188. spacer 6.1|2133063|35|NZ_CP050177|CRISPRCasFinder matches to NC_023316 (Streptomyces sp. 14R-10 plasmid pZL1, complete sequence) position: , mismatch: 9, identity: 0.743

tctttgacccgcaggggcaacgggcccgagccccc	CRISPR spacer
tctttgaaccgcatgggcaacgggcggacgccgga	Protospacer
******* ***** ***********  . ***

189. spacer 9.2|2286961|31|NZ_CP050177|CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.71

gcaacggtcacgcccgaccgcaaccccctca	CRISPR spacer
gagggctacacgcccgaccgcaacccggtca	Protospacer
* ..    ******************  ***

190. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP013856 (Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
tctgaccggacaccgcccggccggcgccgatg	Protospacer
  . ***** ************ *****   *

191. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
ctatgccggccaccgcccggcccacgtcctcg	Protospacer
   ..******************.**.**. *

192. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

193. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

194. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

195. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
cgatgccggccaccgccctgccctcgccatcg	Protospacer
 * ..************* **** **** . *

196. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

197. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

198. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

199. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

200. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

201. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

202. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

203. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

204. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
cgagcccggccaccgcccgcgccgcgccggcg	Protospacer
 *   **************  *******   *

205. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
cggcaccggccaccgcctggctcgcgtggctt	Protospacer
 * **************.***.****.  *

206. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

207. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
gcctacccgcccccgcccggcccgcgctggct	Protospacer
* *.*** *** ***************.

208. spacer 12.1|2672222|31|NZ_CP050177|CRISPRCasFinder matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

cggggccggtgggccgcgcggcttactagct	CRISPR spacer
cgcggccggtggaccgcgcggctggcggcgg	Protospacer
** *********.********** .* .

209. spacer 5.1|2101616|32|NZ_CP050177|PILER-CR matches to NZ_CP015009 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA04, complete sequence) position: , mismatch: 10, identity: 0.688

caacggtcacgatcggaccgcaacccctctca	CRISPR spacer
gaccggtgacgatcggaccgcaccccgcaggg	Protospacer
 * **** ************** *** .   .

210. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 10, identity: 0.688

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
ccttcccggcctccgcccggcccgcgtccgcc	Protospacer
  .. ****** **************.**

211. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 11, identity: 0.656

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
ctgtgccggccaccgccagccccgcgcctacc	Protospacer
   ..************ * ********.

212. spacer 11.1|2427459|32|NZ_CP050177|CRISPRCasFinder matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ggccaccggccaccgcccggcccgcgccccgg	CRISPR spacer
ctgtgccggccaccgccagccccgcgcctacc	Protospacer
   ..************ * ********.

213. spacer 18.2|3694703|37|NZ_CP050177|CRISPRCasFinder matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 12, identity: 0.676

ccgtgcggtccgacccggccgggctgccgctggaggt	CRISPR spacer
agccgcggtccaacccggccgggcggccgccaccgaa	Protospacer
   .*******.************ *****..  *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6235918 : 6243121

Streptomyces_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_167033970.1\|6235918_6236560_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	8.5e-11	29.4
WP_167033971.1\|6236559_6237915_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_167037691.1\|6238060_6238717_+	nicotinamide mononucleotide transporter	A0A0F6YPU8	Sinorhizobium_phage	1.8e-11	27.5
WP_167033972.1\|6238713_6239793_+	AAA family ATPase	A0A2K8HHU5	Bacteriophage	1.4e-29	31.6
WP_167033973.1\|6239789_6240584_+	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	1.4e-18	43.0
WP_167037694.1\|6240583_6241603_+	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA
WP_167033974.1\|6241606_6242446_+	nucleotidyltransferase domain-containing protein	K4K696	Caulobacter_phage	1.5e-07	41.7
WP_167033975.1\|6242371_6243121_-	nucleotidyltransferase	A0A1J0GW18	Streptomyces_phage	6.2e-13	32.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050177

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CRISPR-Cas detection and classification

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