CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP022848	Bosea sp. ANAM02	1 crisprs	csa3,DEDDh,WYL,cas3	0	1	7	0
NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	4 crisprs	c2c9_V-U4,cas9,DEDDh,cas6e,csf3gr5,csf2gr7,DinG	0	34	61	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022848_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022848_1

734242-734318

Orphan

Consensus_repeat	Method
GTTCAGTTGGGCCGCGCCGCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022848_1

>merge|NZ_AP022848|1|734242-734318|CRISPRCasFinder
GTTCAGTTGGGCCGCGCCGCGTTCCTCACTAACATCGCATCGGGGATCGGGATGTTGCAGTTGGGCCGCGCCGCGTT

>NZ_AP022848|1|1|734242-734318|CRISPRCasFinder
GTTCAGTTGGGCCGCGCCGCGTT	CCTCACTAACATCGCATCGGGGATCGGGATG
TTGCAGTTGGGCCGCGCCGCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022848.1\|WP_173043476.1\|725194_725959_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_AP022848.1\|WP_173043474.1\|723808_724507_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_AP022848.1\|WP_173043477.1\|726046_727213_+\|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	unknown	unknown	gnl\|CDD\|239432
NZ_AP022848.1\|WP_173043489.1\|746224_747097_+\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143587
NZ_AP022848.1\|WP_173043480.1\|729676_731161_+\|M81-family-metallopeptidase	unknown	unknown	gnl\|CDD\|227763
NZ_AP022848.1\|WP_173043484.1\|738224_739550_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|236027
NZ_AP022848.1\|WP_173043481.1\|731160_732723_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173867
NZ_AP022848.1\|WP_173043472.1\|721222_722437_+\|IS91-family-transposase	unknown	unknown	gnl\|CDD\|377437
NZ_AP022848.1\|WP_173043473.1\|722937_723777_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270225
NZ_AP022848.1\|WP_173043485.1\|739557_741027_+\|M81-family-metallopeptidase	unknown	unknown	gnl\|CDD\|377823
NZ_AP022848.1\|WP_173043479.1\|728338_729664_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|236027
NZ_AP022848.1\|WP_173043487.1\|742747_743692_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_AP022848.1\|WP_173043482.1\|734431_735232_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238623
NZ_AP022848.1\|WP_173043475.1\|724542_725205_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_AP022848.1\|WP_173043478.1\|727472_728342_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_AP022848.1\|WP_173049304.1\|744560_746228_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NZ_AP022848.1\|WP_173043486.1\|741070_742651_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173867
NZ_AP022848.1\|WP_173043488.1\|743688_744561_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_AP022848.1\|WP_173043483.1\|737095_737986_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_AP022848.1\|WP_173043490.1\|747105_747648_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|367130

Protein	Function_ID	Function_description	E-value
NZ_AP022848.1\|WP_173043476.1\|725194_725959_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.27643e-154
NZ_AP022848.1\|WP_173043474.1\|723808_724507_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.85366e-68
NZ_AP022848.1\|WP_173043477.1\|726046_727213_+\|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	gnl\|CDD\|239432	cd03316, MR_like, Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).	5.7331e-105
NZ_AP022848.1\|WP_173043489.1\|746224_747097_+\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143587	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes. This superfamily (also known as the C-N hydrolase superfamily) contains hydrolases that break carbon-nitrogen bonds; it includes nitrilases, cyanide dihydratases, aliphatic amidases, N-terminal amidases, beta-ureidopropionases, biotinidases, pantotheinase, N-carbamyl-D-amino acid amidohydrolases, the glutaminase domain of glutamine-dependent NAD+ synthetase, apolipoprotein N-acyltransferases, and N-carbamoylputrescine amidohydrolases, among others. These enzymes depend on a Glu-Lys-Cys catalytic triad, and work through a thiol acylenzyme intermediate. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. These oligomers include dimers, tetramers, hexamers, octamers, tetradecamers, octadecamers, as well as variable length helical arrangements and homo-oligomeric spirals. These proteins have roles in vitamin and co-enzyme metabolism, in detoxifying small molecules, in the synthesis of signaling molecules, and in the post-translational modification of proteins. They are used industrially, as biocatalysts in the fine chemical and pharmaceutical industry, in cyanide remediation, and in the treatment of toxic effluent. This superfamily has been classified previously in the literature, based on global and structure-based sequence analysis, into thirteen different enzyme classes (referred to as 1-13). This hierarchy includes those thirteen classes and a few additional subfamilies. A putative distant relative, the plasmid-borne TraB family, has not been included in the hierarchy.	3.17267e-63
NZ_AP022848.1\|WP_173043480.1\|729676_731161_+\|M81-family-metallopeptidase	gnl\|CDD\|227763	COG5476, COG5476, Uncharacterized conserved protein [Function unknown].	4.34229e-104
NZ_AP022848.1\|WP_173043484.1\|738224_739550_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|236027	PRK07483, PRK07483, aspartate aminotransferase family protein.	0
NZ_AP022848.1\|WP_173043481.1\|731160_732723_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173867	cd08502, PBP2_NikA_DppA_OppA_like_16, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_AP022848.1\|WP_173043472.1\|721222_722437_+\|IS91-family-transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	6.79077e-81
NZ_AP022848.1\|WP_173043473.1\|722937_723777_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270225	cd01004, PBP2_MidA_like, Mimosine binding domain of ABC-type transporter MidA and similar proteins; the type 2 periplasmic binding protein fold. This subgroup includes the periplasmic binding component of ABC transporter involved in uptake of mimosine MidA and its similar proteins. This periplasmic binding domain belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.77159e-59
NZ_AP022848.1\|WP_173043485.1\|739557_741027_+\|M81-family-metallopeptidase	gnl\|CDD\|377823	pfam07364, DUF1485, Metallopeptidase family M81. This is a family of proteobacterial metallo-peptidases.	5.76192e-82
NZ_AP022848.1\|WP_173043479.1\|728338_729664_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|236027	PRK07483, PRK07483, aspartate aminotransferase family protein.	0
NZ_AP022848.1\|WP_173043487.1\|742747_743692_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.84459e-122
NZ_AP022848.1\|WP_173043482.1\|734431_735232_-\|amidohydrolase-family-protein	gnl\|CDD\|238623	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.	2.97851e-44
NZ_AP022848.1\|WP_173043475.1\|724542_725205_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	6.59306e-41
NZ_AP022848.1\|WP_173043478.1\|727472_728342_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	6.84438e-40
NZ_AP022848.1\|WP_173049304.1\|744560_746228_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NZ_AP022848.1\|WP_173043486.1\|741070_742651_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173867	cd08502, PBP2_NikA_DppA_OppA_like_16, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_AP022848.1\|WP_173043488.1\|743688_744561_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.81456e-86
NZ_AP022848.1\|WP_173043483.1\|737095_737986_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	7.43942e-54
NZ_AP022848.1\|WP_173043490.1\|747105_747648_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|367130	pfam02627, CMD, Carboxymuconolactone decarboxylase family. Carboxymuconolactone decarboxylase (CMD) EC:4.1.1.44 is involved in protocatechuate catabolism. In some bacteria a gene fusion event leads to expression of CMD with a hydrolase involved in the same pathway. In these bifunctional proteins CMD represents the C-terminal domain, pfam00561 represents the N-terminal domain.	2.12568e-07

>NZ_AP022848.1|WP_173043481.1|731160_732723_+|ABC-transporter-substrate-binding-protein
MRRRDFLAAAAATAIARPALSQSRQRVLKFIPQADLANPDPIWTTATVAYNHGFMVWDTPYALDANYRPRPQMVAGHELSDDRLTWRFTLRDGLIFHDGEPVRSIDLVTSIHRWAKRRPLGQLMMSYGAEFTIESDKVFTVRLKKPFGLMLNALADYCFIMPERIAKTDPFKQISEYVGSGPYRFLRDEWKPGAGAAYARFDRYVPRQEETSLLAGGRIAHFDRIEWIVMPDPASAAAALQTGEADWLESPLPDLLPILRNNPATRVLRNDRIGAIGMAAINHLHPPFNNRKLLQAVLTAVDQKEFMQAAFNNEPELFTTGVGVFTKGLPMDNDEAIGAFKADIALAKKMVAESGYKGERAVLMAPGDQAVLGTFAPVMAATLERIGINVDHVTMDWGTLVQRRSSQEPVEKGGWSMFCTSYTGLSVMNPAVHLPLRGTGKAGWFGWPTDPDMEKLRDAWIDAPDLATQRQIARRMQALAFENVPFIPLGQYYFATAARADLTGFVPWPTPIFWNVRRSG
>NZ_AP022848.1|WP_173043480.1|729676_731161_+|M81-family-metallopeptidase
MPRLAVARFSHEGNSFSPVITGLNEFRREWYQGQEAEAVYRGTTTEGGGAVAFLDAHPEWRGTFLRMAGATPAGPVTREAYDAILDEIVADLIQGEWDAVFLSLHGAMVVEGMDLADYEIVRRVREAIGPEIPFGVSFDLHANLDPRIADLVTFAAGFKEHPHVDMKETAELVLDVLDRTVKGEVHPVGHIAKLDAILPSINMRTAEGPMAELEAFARGLEFDPRILDASPFGGFSYGDTIVAGAGALVYADGDKELAKRAAERIVEETRRRLGRFYISLPDAATGIAQALKLGRESQPVAVIDSGDNPLSGGIGDTPEMLRALLEAAPQVSTVLAFFADPALVERCIAAGEGAAISGTLGGRISAEFGPPVPFSGTVLRLTDGHYVNSGPMMRGLPMTLGPTAVIGIGQVRVIVTTACGSAHDPAFYALHGVDFIEVALLCVKAKNHFRAAFSAICPAMIDIDAPGPAALDINRFPFRLAPSTLYPLHIREAS
>NZ_AP022848.1|WP_173043479.1|728338_729664_+|aspartate-aminotransferase-family-protein
MTRLLHRSPASPPPIAAEGSGILLQTADRRAIIDAAGGAAVSCLGHGHPAVVAAIREQVGKLAYAHTGAFSSAPAEELADCLVGHEPGGLSHAYFVSSGSEACEGAFKLARQYFLEIDQPGRTHFIARRQSYHGNTLGALAAGGNASRRAPYTPLLPESFSHVSAPNAYRRPAGTSEADFVDSLEAELEAEFQRLGPGSVAGFVAETVIGATAGAMPAPAGYHAMVRRLCDRHGALLILDEVMCGMGRTGTMHAWEQDGASPDLQTVAKGLGGGYQPIAAVLMRKPIFAAIRAGSGRLWHGHTYMNHPVACAAALAVQRTIASEGLLSRVQTMGERLSQRLNARFGNHPHVGDIRGRGLIQAIELVSDRSAKEPFDPALRLNERVKQAAFDLGLACYPSGGTADGVRGDHVLLAPPYIVTAEEIDRIVEILGEAVDLALAS
>NZ_AP022848.1|WP_173043478.1|727472_728342_+|MurR/RpiR-family-transcriptional-regulator
MRTATADTVALLTAALRRLPPQQADAARFVIGRSFEAATMPMRGLARAAGLPPATFTRLAQSLGLPGWDELRAGLIADTRENLGARRPFSVRPLPERGTEPLAGAMIAADRAILDHLDAERIEQAAALLEAAPRVLVAGFRSCHAPALLFHYQYRLFRPDIALMGGVGGVLDVELGALKAGDALLLFGFDPYSRDGLLCAEAAADAGAKVVAVVDRPDAPVAEGAAVVLTFGTDSSGFFPSLTGCIALVQALAATLYSRAGDAGREQLRRTEARIAAHTPYLETGSRRR
>NZ_AP022848.1|WP_173043477.1|726046_727213_+|mandelate-racemase/muconate-lactonizing-enzyme-family-protein
MLTIDNLRVFNIRGGGLHPVLVELSTRDGIKGYGEAAVAYGIGANAAAGMLSDLAHKVVGQDATYPRNIWHEIYDNSFWTKGGGAIVFAALSAIDQALWDIKAKSLGVPVYELFGAKFESSLEVYANGWNTDHDDAMEWAKAAERPLKDGYTILKCYPLATRQEGGTLRHVQRRSLSTEEFKRAINRVRALRKVVGPDISLMFDLSGGLNNDQLIRFMDVCTELDVTWVEEPVDPFNIQGLRNFAGRWPIPIAAGERVYTRQGFRNLLETGGIDIVMPDVGNCGGIFEAVQIAAMAESYNARVSPHNCASSLCTAATVQVWAASGMGMPLETYPYFSDANDYVQVLANPPEKAVVKGRLAVPTDPGIGAEINLEAVNPFRCFDFKADA
>NZ_AP022848.1|WP_173043476.1|725194_725959_+|amino-acid-ABC-transporter-ATP-binding-protein
MPIEATAAEAGREAVIALEGLNKWFGAMHVLKDVSLSIDKGEKVVICGPSGSGKSTLIRCINGLEQHQGGQISVEGVELGPKTLAQVRREVGMVFQSFNLFPHLTIKENCMLAPMEARGLSKKEAEERSMDYLRRVHIAEHAHKYPSQLSGGQQQRAAIARALCMQPRIMLFDEPTSALDPEMISEVLDTMMELAASGMTMVCVTHEMGFAQKVADRVVFMDQGAIAEVGPPKQLFQSPSSERLALFLKRILTH
>NZ_AP022848.1|WP_173043475.1|724542_725205_+|GntR-family-transcriptional-regulator
MSLTALKRQPAEQLATEALKESILAGDLKPGERLTEAALADQFAVSRGTVRTALHQLSRDRLVVLTPYTGWAVATIDRQDLWEIYTLRSSLERLAARLAAERIDDKGRARLITVRDAFFAACERSDVEVAVDHDFSLHRTIVELSGNKRLLDQYLMVEQQIRLFINSTYASAPNLSVAIDHHSPIIDAVLAGDGAAAAGHSEHHILSEGERVLAMVKDAD
>NZ_AP022848.1|WP_173043474.1|723808_724507_+|amino-acid-ABC-transporter-permease
MRFDLDYFLSLLFSTRFFEPVAIVIIVAATAMVIGVLIGTVGGIVLNSPVPLLQRLVKLYVTTIRGVPVLVQIVFWYNGLPALTGGAINLSAYAAGIIALGVNEGAYMTEIVRSGIQSVDRGQREASQVLSLSYRSMMMKVILPQAIRIAIPPTGNQVVNLLKNTSLLFTIAIPEIFATGTNLFSANFKYFEVIAVVAIWYLLLAIAYGFIQRAVERRFAKGRRDLYDLAAA
>NZ_AP022848.1|WP_173043473.1|722937_723777_+|transporter-substrate-binding-domain-containing-protein
MNSKTLNSTLAFLGATLGMAVAPSMAQCLPAPPSLVEAGHLTVGTSLTAPPMGFMKDDTPSGFDPEFITAVAEKMCLKTKIVNVTFQGLFPGLIAKKFDVIASQIGITEPRKEMFDFVPVFVGGLRLVTQKNSGLKFQTESDVCGHAASIVAGSTQMAALERVKGDCPAGKPMTLKVFTNQSEALNEVAKGTVNVAYVDWPVAAYLIQQRPQDFVEASPVLSGKGPNTERNRNGIVIRKGETATQDAVAAAVKAAMSAGAYEGILKKWNLADGDVRKAN
>NZ_AP022848.1|WP_173043472.1|721222_722437_+|IS91-family-transposase
MARPSLEVADILNRHGDAFLARHRLSRGQLKVIGAIRACRTAALGGHVMACGDCDHATIAYNSCRNRHCPRCQGAAAKDWLADRQADLLPVPYYHLVFTLPAPVAAIAFQNKAAVYGLLFKAAAETLATIASDPRHLGTRIGFTSVLHTWGSAMTHHPHLHIIAPGGGLSPDSARWIPCRPGFFLPVRVLSRLFRRLFLEGLTALNASGRLAFHGDLAHLAEAEAFATVLAPLRRADWVVYAKRPFGGPEAVLAYLARYTHRVAIANSRIIAMDRHGVTFRWKDYRARSAGETWRKTMTLTAFEFIRRFLLHVLPDGFHRIRHYGLLASSRRAGTIARIRQIIAAPTPDAMTADRGAEISAEQSDPVDERRPPCPCCGGRMILVERFAPGTAPRTILAVRIDTS
>NZ_AP022848.1|WP_173043482.1|734431_735232_-|amidohydrolase-family-protein
MTTHRVSDEAWRALAADAREHGLGLHFHLLESPAQAGSARALYPEGTLSRLESLGVFETRASAAHFVQATARDMADAARLGLRVVMNPGSNMRLGNGAPPVAAMMDAGIRFGLGTDNCALDDNEDYLSELRLGRLLGRSASAAPAGQLRSFLAVATEWGAEAAFLGGTGLIRDGFKADLVAIDLAAAEGVYMDPQTRALEAVLARAGGQDVAMTMVGGSILHDRKAPARQAAERIRAAAGRTAAETRLDAGTWSLASRLSEALRSR
>NZ_AP022848.1|WP_173043483.1|737095_737986_-|MurR/RpiR-family-transcriptional-regulator
MLQADPLRERIVSLFDGMSPQLRQAARYIIEHPQEVALVSMRELARNAGVQPSTMTRLAKFLGLAGYDDIRAHHAEAIRFRVDGFAARAMQTEESEENMAAAQLSRRMLQGLAAQIARLTEPVSLERLATAADRLAQARRIFVLGLRSCHSVAWHFHYVMTLLGEKTTHLDGPADTVGDGLIRAGAEDVLLAISINPYALHSLELAQLAREKGLGIIAITDSEVSPLVGLADIAILCSTESQSFFHTLAPALAISEVLCGLLANKDRTAALAALQRADHHLLSLNTYATAIPRRRI
>NZ_AP022848.1|WP_173043484.1|738224_739550_+|aspartate-aminotransferase-family-protein
MTRILHRSIGGSLPQAVSGHGVTITDADGRSYIDGSGGAAVSCLGHGHPEVMAAMQAQMDRIAYAHTSFFTTDVAEQLAERLVDLAPEGLDYVYLVSGGSEAVEAAMKMARQYFVEIGQPQRRHFIARRQSYHGNTLGALAAGGNAWRRAQFQPILPETHHVSPCYAYRDQRDGEAPEAYAVRLADELEAKILELGADEVIAFIAEPVVGATLGAVGPVADYFARIRRICDKYGVLLILDEVMCGMGRTGTVFACEQEGIAPDLVTIAKGLGGGYQPIGAVLLSETIYRAFAEGSGLFQHGHTYICHPMAAAAALKVVELISQPEMMENVRRMGERLQAGLDARLGQHPHVGDIRGRGLFRGIEIVADKETKAPFDPALKIHARIKREAMARGLLCYPMGGTIDGRQGDHVLLAPPYIISPEDIDQIVERIGGAIDAAIRG
>NZ_AP022848.1|WP_173043485.1|739557_741027_+|M81-family-metallopeptidase
MTLRIAFAGFNLESVTAVPQIVELAEFERVCVRGRELTARFRGTNTVPGGCLKICEAEGAEFVPLFHTLLGALGPAADATVEHYTREIVEGLGRSGPLDGVILFLHGACWAAGYPDVERHVIDAVRAAFPALPIAVALDYHGNIDRETLRGADIAVAYRNSPHIDMGETGERAARALIRLLREGRRPGLAVARPDVVIPSIMSATALQPLASIIAEARAAEQAGDCDISIMAGFSYADSANTGMSVICLDWAGQEAAELKAQSFSGLLRAAREPIASAIPILSVEEALADIERKPAQERPIVLLEHADRMNDSTHLLRALLKRDVGRVNVPFLLDPETAAQAHEAGEGSVIAVALAGKTAPETGGPVKVEARVIWSGPKSFNVSGRYQRGSFVDLGLTALLQIGTIRVSVVSHFAFAVDGDPFFIFGERPEDYDVILLRSKTHYRDYYEPMADRILVVDTPDLGPADVRLIPYRQLDTARAYPWSEAPA
>NZ_AP022848.1|WP_173043486.1|741070_742651_+|ABC-transporter-substrate-binding-protein
MTFRFKIVGAAALVAGSLSAMPALAETTLNVVMQAPLRSLDPILSTAQIVRTHGFMVFDTLLGMDAKYNPQPQMADSAVSADKLTYTLTLRDGLKWHDGTPVTAADCVASLKRWGENDGAARTMMAHVASIEATSEKVLVIKLAKPFGQVLELLAKPSPVPPFMMPKRLAETPAGKQVTEMIGSGPFRFVADQYRPGDQAVYVKNTDYKPRSEPMSWTAGGKVINVDKVVWKAMPDMQTSINALQSGDVDLIEQVTIDLLPLLKANDEIRTGAINALGSQVTGRFNHRLPPFDNAKVRRAAMYALDQDQLMQTAIGDSQYYKLCASIYGCDVPLASDAGSEYLKGSAKERMAKAKELLKASGYDGTPVLMMQPTDLTILSTQPIVAAERLREAGFKVDVASMDWATLQSRKNGWQPVAQGGWNMFFTYWGVSGIWNPTVHALIDGSGKDSAWAGWPKSPRVEELRTAYLTAATAEEQKKIAREIQQIAFDEGFYFNAGEFQSVAAWNARLKNLQPGPITLFWGVSK
>NZ_AP022848.1|WP_173043487.1|742747_743692_+|ABC-transporter-permease
MASYFLRRLAMAIPVMFFVALFVFLLLRLTPGDPAQAIAGDQATPAQLAAIRENLGLDKPIASQFVTWIAGMAEGDFGSSLISQRPVLEMIGQRIGPTLALAIMAMLFTVAISLPLGVLAAWRHGGMVDRFVMALSVVGFSVPIFVIGYVLIAVFAVNLKWFPVQGYRALADGFGPFFHRILLPGLALSSFYVALVSRMTRASILEVLREDYVRTARAKGLGERIVLFRHALRNAAIPILTVVGTGFAMMVSGVVVTETVFNIPGLGRLVVDGVLARDYPLIQAIILLTAGTYVLINLLIDLSYALTDPRIRYQ
>NZ_AP022848.1|WP_173043488.1|743688_744561_+|ABC-transporter-permease
MSAPSNPAQGTHPRRRLLDNPPHWTTVLAVIVIVAVIVMAVFAPQLANFEPTRLNAAMRLKPASDTYWLGTDSFGRDLYSRVVYGARVSLLVGAGVAIGAIVIGLPLGLIAGWYRGIDGVLMRMMDGLMAIPGILLAIAIVALVRGGLVTVIIAIMIPAIPQVVRLVRARVIAAREETYVDAAVLLGTRPAKLIRKHLLPTTIAPLIVQGTYMYASAILTEAALSFLGVGIGTEVPSWGNIMAEGRLYFAINPWLVFWPAIVLSLCILSINLLGDALRDRLDPKMQGRAP
>NZ_AP022848.1|WP_173049304.1|744560_746228_+|ABC-transporter-ATP-binding-protein
MATATIQPVLSVRDLRVATRGRRPSDILKGIGFDIHPGETLCLVGESGSGKSVTSLVAMDLLPRDELHATGGSVRLNGEDILTATPARTKALRGAEMAMIFQEPMTALNPVLTIGLQMDEVYWAHTKMRPKERKEAALAAFESVHLPDPQRIYDSYPHQLSGGQRQRVMIAMALALKPKLLIADEPTTALDVTTQKQILSLIRELQDKQNTAVLFITHDMGVVVDIADRVCVMCRGEIVETGPVEQVLGQPREAYTRDLLQSVPSLTPRAPRASSGGEAVLEIRNLEKTFSFGSLLGKLMGRESRSVRAVRDVSFGLARGRTLGIVGESGSGKSTVARCLMRLEHPTGGEIRVNGQDIANLQGQQALAPARRRVQMVFQDPNRSLNPRLRIGESLIEGPLNLGEDRETALKRAGELMEVVGLPSSSLERFPHQFSGGQRQRIAIARALMMEPEVIVADEAVSALDVSVQAQVLALLAEIQERRNLAVLFITHDLRVAAQICDEVMVMQRGSVVEMGPAAEVLGRPSHDYTRALIAAAPGRNWDFAAGRRIAGATA
>NZ_AP022848.1|WP_173043489.1|746224_747097_+|carbon-nitrogen-hydrolase-family-protein
MISASLVQMDVQSLAPAENFRRIHDFVAEEAAGGAQLILFPELANTGYVEPLVPGGPIVSDVPHFGAALYEACAAPDGEEIRALVALAAKHRTHLVIGLGLRDRLRAGVMRNASLLIGPEGVIGDYTKIHQWQNEKLFFSGGDSIDTYPVFGTRLGMQVCYDIRFPEITRILALQGASIVTSVWASFGAETAPVTDEALFIHRAYTRATENGVFFLSCNRSGSRGGQRFFGRSCAVAPDGRVLGALDHDREDVLRVEIDLAEVARYRSFTGIWVDRVPALYAKYLTPPAP
>NZ_AP022848.1|WP_173043490.1|747105_747648_+|carboxymuconolactone-decarboxylase-family-protein
MTTSPCPPIGDADWPEAIAEMKTGFAGALNVYRTMAHHPALLQAWAPLRQHIVKDSALGPVRSEVVILRAAHRMGSPYEWAHHVSRARVLGMSDARIAALRGEPQGEDGLIARAVDALFDDKRLSLAQEAELAAAIGRAAVFDLIATVGFYSVLGYLLMTYETPIDAAVAAEMTEQPLQP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP022848_1	1.1\|734265\|31\|NZ_AP022848\|CRISPRCasFinder	734265-734295	31	NZ_LR134463	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 21, complete sequence	71268-71298	5	0.839
NZ_AP022848_1	1.1\|734265\|31\|NZ_AP022848\|CRISPRCasFinder	734265-734295	31	MN096374	Microbacterium phage Roman, complete genome	30183-30213	7	0.774
NZ_AP022848_1	1.1\|734265\|31\|NZ_AP022848\|CRISPRCasFinder	734265-734295	31	MK937596	Microbacterium phage PhillyPhilly, complete genome	29716-29746	7	0.774
NZ_AP022848_1	1.1\|734265\|31\|NZ_AP022848\|CRISPRCasFinder	734265-734295	31	MK919474	Microbacterium phage Lupine, complete genome	29537-29567	7	0.774
NZ_AP022848_1	1.1\|734265\|31\|NZ_AP022848\|CRISPRCasFinder	734265-734295	31	NZ_CP022605	Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence	260396-260426	10	0.677

1. spacer 1.1|734265|31|NZ_AP022848|CRISPRCasFinder matches to NZ_LR134463 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 21, complete sequence) position: , mismatch: 5, identity: 0.839

--cctcactaacatcgcatcggggatcgggatg	CRISPR spacer
ggcctcgc--gcagcgcatcggggatcgggatg	Protospacer
  ****.*  .** *******************

2. spacer 1.1|734265|31|NZ_AP022848|CRISPRCasFinder matches to MN096374 (Microbacterium phage Roman, complete genome) position: , mismatch: 7, identity: 0.774

cctcactaacatcgcatcggggatcgggatg	CRISPR spacer
caccagagacatcccatccgggatcgggatg	Protospacer
* .**  .***** **** ************

3. spacer 1.1|734265|31|NZ_AP022848|CRISPRCasFinder matches to MK937596 (Microbacterium phage PhillyPhilly, complete genome) position: , mismatch: 7, identity: 0.774

cctcactaacatcgcatcggggatcgggatg	CRISPR spacer
caccagagacatcccatccgggatcgggatg	Protospacer
* .**  .***** **** ************

4. spacer 1.1|734265|31|NZ_AP022848|CRISPRCasFinder matches to MK919474 (Microbacterium phage Lupine, complete genome) position: , mismatch: 7, identity: 0.774

cctcactaacatcgcatcggggatcgggatg	CRISPR spacer
caccagagacatcccatccgggatcgggatg	Protospacer
* .**  .***** **** ************

5. spacer 1.1|734265|31|NZ_AP022848|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.677

cctcactaacatcgcatcggggatcgggatg	CRISPR spacer
agcgacgatcatcgcatcggggatcggcggc	Protospacer
  . ** * ****************** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

231508 : 294065

Erwinia_phage(13.33%)

integrase,portal,head,protease,tail,tRNA

attL 234734:234750|attR 245296:245312

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173043140.1\|231508_232897_+\|portal	phage portal protein	K4I1F2	Acidithiobacillus_phage	2.3e-85	41.1
WP_173043141.1\|232893_234792_+\|head	Mu-like prophage major head subunit gpT family protein	A0A076G7Y9	Pseudoalteromonas_phage	2.3e-43	30.9
234734:234750	attL	NA	NA	NA	NA
WP_173043142.1\|234794_235019_+	hypothetical protein	NA	NA	NA	NA
WP_173043143.1\|235020_236895_+\|tail	phage tail tape measure protein	A0A068C997	Rhizobium_phage	7.6e-52	38.3
WP_173043144.1\|236891_237392_+	hypothetical protein	NA	NA	NA	NA
WP_173043145.1\|237396_237654_+	hypothetical protein	NA	NA	NA	NA
WP_173043146.1\|237640_238888_+\|integrase	integrase	NA	NA	NA	NA
WP_173043147.1\|239164_240253_-	2'-deoxycytidine 5'-triphosphate deaminase	NA	NA	NA	NA
WP_173043148.1\|240447_240840_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_173049222.1\|240881_242015_+	acetylornithine deacetylase	NA	NA	NA	NA
WP_173043149.1\|242243_243248_-	Hsp33 family molecular chaperone	NA	NA	NA	NA
WP_047577722.1\|243247_244168_-	ornithine carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	2.5e-19	26.2
WP_173043150.1\|244212_245433_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	8.0e-26	27.7
245296:245312	attR	NA	NA	NA	NA
WP_173043151.1\|245976_246525_+	GcrA cell cycle regulator	A0A1V0ED00	Caulobacter_phage	1.5e-11	31.8
WP_047580746.1\|246703_247747_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_173049224.1\|247743_248871_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_173049226.1\|249028_250009_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_047580355.1\|250159_251203_-	GMP reductase	A0A0N9Q9A5	Chrysochromulina_ericina_virus	2.6e-94	53.6
WP_173043152.1\|251272_252403_-	DMT family transporter	NA	NA	NA	NA
WP_173043153.1\|252689_253799_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_173043154.1\|253805_254975_-	glycosyltransferase	NA	NA	NA	NA
WP_173043155.1\|255134_256190_+	glycosyltransferase	NA	NA	NA	NA
WP_173043156.1\|256244_258719_-	hypothetical protein	NA	NA	NA	NA
WP_173043157.1\|258743_259844_-	endo-1,4-beta-xylanase	NA	NA	NA	NA
WP_173043158.1\|259954_261193_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_173043159.1\|261184_262087_-	hypothetical protein	NA	NA	NA	NA
WP_173043160.1\|262097_262925_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA
WP_173043161.1\|263317_264064_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.2e-09	27.3
WP_173043162.1\|264345_265605_+	Zn-dependent hydrolase	NA	NA	NA	NA
WP_173043163.1\|265685_266897_+	5-aminolevulinate synthase	V5LQ39	Emiliania_huxleyi_virus	8.2e-31	27.9
WP_173043164.1\|267064_267526_-	DUF3592 domain-containing protein	NA	NA	NA	NA
WP_173049228.1\|267532_268480_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_047578450.1\|268469_268928_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_173043165.1\|269080_271903_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	9.8e-19	23.0
WP_173049230.1\|271899_272607_-	RNA-binding protein	NA	NA	NA	NA
WP_173043166.1\|272603_274196_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_082009843.1\|274201_274900_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_047580159.1\|275120_276209_+	DUF2336 domain-containing protein	NA	NA	NA	NA
WP_173049232.1\|276183_276909_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_173043167.1\|277030_278263_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	5.0e-92	49.6
WP_173043168.1\|278392_278806_-	helix-turn-helix transcriptional regulator	Q8W6G2	Sinorhizobium_phage	3.9e-25	49.6
WP_173043169.1\|278932_280528_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA
WP_052232409.1\|280527_281517_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_173043170.1\|281529_282102_-	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_173049234.1\|282098_283205_-	PhoH family protein	W8D063	Erwinia_phage	1.5e-47	47.4
WP_173043171.1\|283457_284828_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_156134780.1\|284934_285696_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_173043172.1\|285817_286315_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_173043173.1\|286368_287055_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_173043174.1\|287110_287671_-	NifU family protein	A0A218MN08	uncultured_virus	1.3e-07	34.2
WP_047577943.1\|287772_288267_-	universal stress protein	NA	NA	NA	NA
WP_173043175.1\|288340_289390_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_173043176.1\|289436_290990_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_173043177.1\|291006_291321_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_047578942.1\|291317_291578_-	addiction module antitoxin	NA	NA	NA	NA
WP_173043178.1\|291658_292969_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A2H5BJT2	Erwinia_phage	1.1e-44	30.5
WP_173043179.1\|292965_293499_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_173043180.1\|293495_294065_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA

DBSCAN-SWA_2

944959 : 988231

Rhizobium_phage(32.14%)

capsid,integrase,plate,portal,head,protease,tail,terminase

attL 938182:938198|attR 965420:965436

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
938182:938198	attL	NA	NA	NA	NA
WP_047578012.1\|944959_945217_-	glutaredoxin 3	V9QKN6	Rhizobium_phage	5.4e-09	45.9
WP_173049339.1\|945245_946043_-	ComF family protein	NA	NA	NA	NA
WP_173043701.1\|946644_946875_-	hypothetical protein	NA	NA	NA	NA
WP_173043703.1\|946957_948040_-\|integrase	tyrosine-type recombinase/integrase	F8TUV0	EBPR_podovirus	1.9e-15	26.8
WP_173043705.1\|948313_948535_-	hypothetical protein	NA	NA	NA	NA
WP_173043707.1\|948544_949042_-	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	2.0e-44	57.6
WP_173049341.1\|949045_949249_-	hypothetical protein	R9TN97	Rhizobium_phage	8.6e-18	69.8
WP_173043709.1\|949343_949571_-	hypothetical protein	NA	NA	NA	NA
WP_173043711.1\|949570_950656_-	phage Gp37/Gp68 family protein	A0A0A8ILD3	Aurantimonas_phage	1.0e-96	52.0
WP_173049342.1\|950658_951369_-	DUF550 domain-containing protein	A0A2K8HR09	Pseudomonas_phage	1.0e-33	64.5
WP_173043713.1\|951618_952731_-	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	2.6e-84	48.4
WP_173043715.1\|952792_953761_-	DUF2303 family protein	R9TSA8	Rhizobium_phage	2.1e-77	48.5
WP_173043717.1\|953791_954130_-	hypothetical protein	R9TQI8	Rhizobium_phage	2.8e-21	47.3
WP_173043719.1\|954135_954840_-	hypothetical protein	NA	NA	NA	NA
WP_173043721.1\|954836_955097_-	hypothetical protein	NA	NA	NA	NA
WP_173043723.1\|955218_955455_-	hypothetical protein	NA	NA	NA	NA
WP_173043725.1\|955528_955882_-	hypothetical protein	NA	NA	NA	NA
WP_173043727.1\|956067_956286_+	hypothetical protein	A0A291AUS0	Sinorhizobium_phage	1.0e-08	37.7
WP_173043729.1\|956291_956657_+	DUF3572 domain-containing protein	NA	NA	NA	NA
WP_173043731.1\|956653_957421_-	helix-turn-helix transcriptional regulator	A0A291AUR9	Sinorhizobium_phage	6.3e-45	46.4
WP_173043733.1\|957404_957704_+	hypothetical protein	A0A076G8E5	Sinorhizobium_phage	5.0e-14	60.9
WP_173043735.1\|957889_958390_+	hypothetical protein	NA	NA	NA	NA
WP_173043737.1\|958393_958630_+	hypothetical protein	NA	NA	NA	NA
WP_173043739.1\|958629_958869_+	hypothetical protein	NA	NA	NA	NA
WP_173043741.1\|958837_959080_+	hypothetical protein	NA	NA	NA	NA
WP_173043743.1\|959076_961779_+	DNA methylase N-4	R9TRS8	Rhizobium_phage	0.0e+00	60.9
WP_173043745.1\|961784_963833_+	DNA cytosine methyltransferase	A0A1X9HVK8	Ruegeria_phage	1.4e-128	40.8
WP_173043747.1\|964049_965108_+	bifunctional DNA primase/polymerase	A0A068F3J2	Mycobacterium_phage	5.9e-09	29.4
WP_173043749.1\|965104_966841_+	DNA primase	Q8W5V7	Listeria_phage	6.4e-53	38.5
965420:965436	attR	NA	NA	NA	NA
WP_173043751.1\|967169_967967_+	hypothetical protein	NA	NA	NA	NA
WP_173043753.1\|968068_968653_+	hypothetical protein	A0A0A8IL87	Aurantimonas_phage	1.4e-28	42.9
WP_173043755.1\|969459_971559_+\|terminase	phage terminase large subunit family protein	G8DH41	Emiliania_huxleyi_virus	7.9e-106	35.9
WP_173043757.1\|971555_973154_+\|portal	phage portal protein	A0A068CC70	Rhizobium_phage	4.2e-152	53.4
WP_173043759.1\|973150_973393_+	hypothetical protein	NA	NA	NA	NA
WP_173043761.1\|973402_974443_+\|protease	Clp protease ClpP	A0A0A8IKZ4	Aurantimonas_phage	5.0e-61	47.9
WP_173043763.1\|974446_974830_+\|head	head decoration protein	NA	NA	NA	NA
WP_173043765.1\|974840_975848_+\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	9.1e-52	38.9
WP_173043767.1\|975850_976240_+	hypothetical protein	NA	NA	NA	NA
WP_173043769.1\|976236_977007_+	hypothetical protein	NA	NA	NA	NA
WP_173043771.1\|977006_977477_+\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_173043773.1\|977473_977734_+	PAAR domain-containing protein	R9U4D0	Rhizobium_phage	2.7e-08	59.0
WP_173043775.1\|977733_978114_+	GPW/gp25 family protein	A0A193GYY8	Enterobacter_phage	7.7e-20	53.5
WP_173043777.1\|978110_979181_+\|plate	baseplate J/gp47 family protein	V5YTH6	Pseudomonas_phage	2.8e-35	39.6
WP_173043779.1\|979177_979792_+\|tail	phage tail protein I	K7R2P6	Vibrio_phage	7.3e-20	43.6
WP_173043781.1\|979788_981606_+\|tail	phage tail protein	NA	NA	NA	NA
WP_173043783.1\|981615_982218_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_173043785.1\|982321_983791_+\|tail	phage tail protein	A0A1B2LRR3	Wolbachia_phage	5.5e-29	37.2
WP_173043787.1\|983862_984369_+\|tail	phage major tail tube protein	K4I1G5	Acidithiobacillus_phage	5.8e-23	37.0
WP_173043789.1\|984402_984687_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_173043791.1\|984903_987129_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_173043793.1\|987125_987569_-	hypothetical protein	NA	NA	NA	NA
WP_173043795.1\|987567_988014_+\|tail	phage tail protein	NA	NA	NA	NA
WP_173043797.1\|988018_988231_+\|tail	tail protein X	A0A2H4J946	uncultured_Caudovirales_phage	1.5e-12	50.0

DBSCAN-SWA_3

2514401 : 2524866

uncultured_Mediterranean_phage(77.78%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173045891.1\|2514401_2515412_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	5.2e-23	38.9
WP_173045893.1\|2515602_2516433_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.2e-30	32.5
WP_173045895.1\|2516429_2517125_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.5e-37	47.6
WP_173049531.1\|2517243_2518395_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	2.1e-12	30.7
WP_047577664.1\|2518476_2518725_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	5.8e-08	65.1
WP_173045897.1\|2518769_2519474_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_047580446.1\|2519470_2520283_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	3.9e-53	46.8
WP_173045899.1\|2520485_2521787_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.3e-95	46.5
WP_173045901.1\|2521790_2522552_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-35	37.1
WP_173045903.1\|2522690_2523353_+	protein-L-isoaspartate O-methyltransferase	NA	NA	NA	NA
WP_173045905.1\|2523597_2524866_+	peptidoglycan DD-metalloendopeptidase family protein	Q8SBN9	Clostridium_phage	3.5e-16	41.0

DBSCAN-SWA_4

3562880 : 3608821

Paracoccus_phage(20.0%)

tail,tRNA,head,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173049646.1\|3562880_3563837_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_173047311.1\|3564215_3566003_+	ABC transporter ATP-binding protein/permease	F2Y1V6	Organic_Lake_phycodnavirus	1.3e-08	26.5
WP_047580561.1\|3566045_3566876_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_173049648.1\|3566880_3567750_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_173049650.1\|3567767_3568835_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	9.2e-18	30.3
WP_173047313.1\|3568926_3570117_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_173047315.1\|3570276_3570972_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_173047317.1\|3571016_3572213_+	mannonate dehydratase	NA	NA	NA	NA
WP_173047319.1\|3572422_3573106_-	urease accessory protein UreE	NA	NA	NA	NA
WP_173047321.1\|3573209_3574247_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_173047323.1\|3574480_3575359_-	DUF1003 domain-containing protein	NA	NA	NA	NA
WP_047572597.1\|3575538_3575877_-	hypothetical protein	NA	NA	NA	NA
WP_173047325.1\|3575968_3576883_-	sugar kinase	NA	NA	NA	NA
WP_173047327.1\|3576937_3577282_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_173047329.1\|3577282_3577528_-	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA
WP_173047331.1\|3577589_3578039_-	VOC family protein	NA	NA	NA	NA
WP_082009973.1\|3578143_3579589_+	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_173047333.1\|3579778_3582424_+	aminopeptidase N	NA	NA	NA	NA
WP_173047335.1\|3582878_3585173_+	PAS-domain containing protein	A0A1V0SGX0	Hokovirus	1.3e-29	36.4
WP_173047337.1\|3585288_3588243_-	bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA	NA	NA	NA
WP_173049652.1\|3588395_3589901_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_173047339.1\|3589908_3590589_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.3e-28	33.8
WP_173047341.1\|3590713_3591886_-	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	2.8e-20	26.8
WP_173047343.1\|3592066_3592336_+	hypothetical protein	NA	NA	NA	NA
WP_173047346.1\|3592399_3592882_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_173047348.1\|3592887_3594864_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_052232581.1\|3594871_3595390_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_173047350.1\|3595386_3596490_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
WP_173047352.1\|3596557_3597937_-	sensor histidine kinase	NA	NA	NA	NA
WP_173047354.1\|3597946_3598615_-	response regulator transcription factor	NA	NA	NA	NA
WP_173047356.1\|3598652_3598976_-	hypothetical protein	NA	NA	NA	NA
WP_173047358.1\|3599039_3602963_-	glycoside hydrolase TIM-barrel-like domain-containing protein	A0A0B5A7K5	Paracoccus_phage	1.4e-212	36.7
WP_173047360.1\|3602962_3603394_-	C40 family peptidase	F4YXU4	Roseobacter_phage	1.3e-34	49.6
WP_173047362.1\|3603390_3604272_-	DUF2163 domain-containing protein	A0A1V0DY93	Dinoroseobacter_phage	2.5e-61	40.7
WP_047579551.1\|3604281_3604920_-	DUF2460 domain-containing protein	A0A0B5A2K3	Paracoccus_phage	1.7e-51	50.0
WP_173047364.1\|3604932_3605529_-\|tail	phage tail tape measure protein	G9JXH3	Shigella_phage	9.0e-07	47.8
WP_173047366.1\|3605565_3606186_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_047576756.1\|3606118_3606529_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_173047368.1\|3606610_3607021_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_173047369.1\|3607017_3607353_-\|head	phage head closure protein	NA	NA	NA	NA
WP_173047371.1\|3607355_3607925_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_173047373.1\|3608041_3608821_+\|protease	trypsin-like serine protease	NA	NA	NA	NA

DBSCAN-SWA_5

4170200 : 4178839

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173048090.1\|4170200_4171130_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	5.9e-05	29.4
WP_047573532.1\|4171281_4171818_-	peptide deformylase	E3SLL2	Synechococcus_phage	8.1e-23	43.8
WP_173048092.1\|4171931_4173116_+	DNA recombination protein RmuC	NA	NA	NA	NA
WP_173048094.1\|4173390_4175520_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.1e-11	34.1
WP_047572555.1\|4175699_4176215_-	OsmC family protein	NA	NA	NA	NA
WP_173048096.1\|4176257_4176968_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	2.7e-10	32.0
WP_173048098.1\|4177129_4177912_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.9e-35	39.4
WP_173048100.1\|4178008_4178839_-	ABC transporter permease	G3M9Y4	Bacillus_virus	1.5e-12	24.3

DBSCAN-SWA_6

4350654 : 4361122

Pandoravirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173048330.1\|4350654_4351584_+	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	1.8e-38	32.1
WP_173048332.1\|4351599_4352880_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	3.0e-55	35.2
WP_173048334.1\|4353086_4354205_-	chorismate synthase	A0A291AU41	Pandoravirus	3.2e-74	44.8
WP_173048336.1\|4354280_4358300_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.1e-60	33.0
WP_173048339.1\|4358666_4359263_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_173048341.1\|4359403_4360246_+	dihydropteroate synthase	S4VNV0	Pandoravirus	1.2e-23	32.7
WP_173048343.1\|4360242_4360617_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_047581595.1\|4360606_4361122_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	S4W084	Pandoravirus	9.5e-13	35.1

DBSCAN-SWA_7

4713552 : 4782191

Staphylococcus_phage(37.5%)

transposase,integrase

attL 4701313:4701329|attR 4756634:4756650

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4701313:4701329	attL	NA	NA	NA	NA
WP_173048862.1\|4713552_4714310_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_173048864.1\|4714394_4715021_+	hypothetical protein	NA	NA	NA	NA
WP_173048866.1\|4715007_4715838_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_173048868.1\|4715838_4716546_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.3e-09	22.1
WP_173049807.1\|4716547_4717288_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	4.3e-14	29.3
WP_173048870.1\|4717287_4718340_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_173048872.1\|4718332_4719223_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_173048874.1\|4719292_4720474_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_173048876.1\|4720519_4720987_-	PaaI family thioesterase	NA	NA	NA	NA
WP_173048894.1\|4720991_4721795_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_173048896.1\|4721853_4723398_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	2.7e-26	23.0
WP_173048898.1\|4723390_4723927_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_173048899.1\|4723914_4724742_-	FAD binding domain-containing protein	NA	NA	NA	NA
WP_173048900.1\|4724738_4727693_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_173048901.1\|4727868_4728714_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_173048862.1\|4729306_4730064_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_173048902.1\|4730222_4731353_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_173049809.1\|4731465_4732599_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_173048903.1\|4732668_4733808_+	CoA transferase	NA	NA	NA	NA
WP_173048904.1\|4733896_4734580_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_173048905.1\|4734552_4736202_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	7.5e-19	28.2
WP_173048907.1\|4736389_4737532_+	CoA transferase	NA	NA	NA	NA
WP_173048909.1\|4737577_4738705_+	glycoside hydrolase family 88 protein	NA	NA	NA	NA
WP_173048912.1\|4738773_4739544_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_173048537.1\|4739530_4740277_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.2e-12	28.9
WP_173048913.1\|4740335_4741541_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_173048540.1\|4741708_4742596_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_173048915.1\|4742618_4743611_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_173048917.1\|4743629_4744376_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_173048919.1\|4744375_4745320_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_173048921.1\|4745330_4745624_-	hypothetical protein	NA	NA	NA	NA
WP_173048923.1\|4745620_4745935_-	hypothetical protein	NA	NA	NA	NA
WP_173048925.1\|4745961_4746354_-	hypothetical protein	NA	NA	NA	NA
WP_173048927.1\|4746395_4746815_-	hypothetical protein	NA	NA	NA	NA
WP_173048929.1\|4746916_4747672_-	P-loop NTPase	NA	NA	NA	NA
WP_173048931.1\|4747681_4748410_-	hypothetical protein	NA	NA	NA	NA
WP_173048934.1\|4748739_4749111_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_173048936.1\|4749110_4750664_+	hypothetical protein	NA	NA	NA	NA
WP_173048938.1\|4751548_4753123_-	hypothetical protein	NA	NA	NA	NA
WP_173048940.1\|4753339_4753774_-	hypothetical protein	NA	NA	NA	NA
WP_173043471.1\|4754127_4754991_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	5.8e-31	32.2
WP_173043472.1\|4755006_4756221_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_173048942.1\|4756607_4759238_-	AAA family ATPase	NA	NA	NA	NA
4756634:4756650	attR	NA	NA	NA	NA
WP_173048943.1\|4759234_4760359_-	DNA repair exonuclease	NA	NA	NA	NA
WP_173048945.1\|4760369_4766357_-	DUF3320 domain-containing protein	NA	NA	NA	NA
WP_173048946.1\|4766552_4767784_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	2.5e-104	67.8
WP_173048947.1\|4767831_4768230_-	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_173048948.1\|4768550_4769603_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_173048950.1\|4769681_4770134_+	cytochrome P460 family protein	NA	NA	NA	NA
WP_173049811.1\|4772216_4772984_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_173048952.1\|4773198_4773765_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_173048954.1\|4775056_4777807_-	EAL domain-containing protein	NA	NA	NA	NA
WP_173048956.1\|4777803_4779033_-	FecR domain-containing protein	NA	NA	NA	NA
WP_173048958.1\|4779213_4780914_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_173048960.1\|4781043_4782191_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	9.1e-64	46.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_AP022849

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022849_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022849_1

496142-496575

Consensus_repeat	Method
TGCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAATT	CRISPRCasFinder
GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT	PILER-CR
GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT	CRT

6 spacers

cas9

The CRISPR arrays of NZ_AP022849_1

>merge|NZ_AP022849|1|496142-496575|CRISPRCasFinder,PILER-CR,CRT
AGCTTCGGTTGGACCGCACCTCGTTCTTTGCTAGAATACAGATAACCGTCTCGCCTGCGATGATGCAGCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAATTCGGGCGATGATTGACCAGCTCCGCAGCGAGCTGCGGTTGGACCGCACCCCGTTCCTTGCTAGAATCCGTGCTGTGGCCCGTAATCGTCATCACCTGCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAATTGCCGTCGCCGGCGAGCCCGAAGTCCACCTGCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAATTCCCGCCGAGCTATTCAGTGATCTCGATATGCTGCGGTTGGACCGTACCTCGTTCCTTGCTAGAATTAGCAGGCCCTCGTTGTTTGCCGCCTCATAGCTGCGGTTGGGCCGTACCTCGTTCCTTGCTAGAATA

>NZ_AP022849|1|1|496142-496575|CRISPRCasFinder
AGCTTCGGTTGGACCGCACCTCGTTCTTTGCTAGAATA	CAGATAACCGTCTCGCCTGCGATGATGC
AGCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAATT	CGGGCGATGATTGACCAGCTCCGCAGCG
AGCTGCGGTTGGACCGCACCCCGTTCCTTGCTAGAATC	CGTGCTGTGGCCCGTAATCGTCATCACC
TGCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAATT	GCCGTCGCCGGCGAGCCCGAAGTCCACC
TGCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAATT	CCCGCCGAGCTATTCAGTGATCTCGATA
TGCTGCGGTTGGACCGTACCTCGTTCCTTGCTAGAATT	AGCAGGCCCTCGTTGTTTGCCGCCTCAT
AGCTGCGGTTGGGCCGTACCTCGTTCCTTGCTAGAATA

>NZ_AP022849|1|1|496143-496574|PILER-CR
GCTTCGGTTGGACCGCACCTCGTTCTTTGCTAGAAT	ACAGATAACCGTCTCGCCTGCGATGATGCA
GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT	TCGGGCGATGATTGACCAGCTCCGCAGCGA
GCTGCGGTTGGACCGCACCCCGTTCCTTGCTAGAAT	CCGTGCTGTGGCCCGTAATCGTCATCACCT
GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT	TGCCGTCGCCGGCGAGCCCGAAGTCCACCT
GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT	TCCCGCCGAGCTATTCAGTGATCTCGATAT
GCTGCGGTTGGACCGTACCTCGTTCCTTGCTAGAAT	TAGCAGGCCCTCGTTGTTTGCCGCCTCATA
GCTGCGGTTGGGCCGTACCTCGTTCCTTGCTAGAAT

>NZ_AP022849|1|1|496143-496574|CRT
GCTTCGGTTGGACCGCACCTCGTTCTTTGCTAGAAT	ACAGATAACCGTCTCGCCTGCGATGATGCA
GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT	TCGGGCGATGATTGACCAGCTCCGCAGCGA
GCTGCGGTTGGACCGCACCCCGTTCCTTGCTAGAAT	CCGTGCTGTGGCCCGTAATCGTCATCACCT
GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT	TGCCGTCGCCGGCGAGCCCGAAGTCCACCT
GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT	TCCCGCCGAGCTATTCAGTGATCTCGATAT
GCTGCGGTTGGACCGTACCTCGTTCCTTGCTAGAAT	TAGCAGGCCCTCGTTGTTTGCCGCCTCATA
GCTGCGGTTGGGCCGTACCTCGTTCCTTGCTAGAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022849.1\|WP_173050729.1\|493938_494760_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050723.1\|492043_492427_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173051179.1\|495332_496022_+\|RNA-ligase-family-protein	unknown	unknown	gnl\|CDD\|378183
NZ_AP022849.1\|WP_173050735.1\|501706_502768_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050746.1\|506905_508003_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050721.1\|491601_492093_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050716.1\|488780_489272_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050737.1\|502775_503228_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050748.1\|508121_509048_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|236338
NZ_AP022849.1\|WP_173050744.1\|505844_506909_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050714.1\|488169_488688_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050739.1\|503344_503986_+\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|372611
NZ_AP022849.1\|WP_173050725.1\|492474_492900_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050727.1\|493012_493942_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050733.1\|500444_501626_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050731.1\|496663_499900_-\|hypothetical-protein	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_AP022849.1\|WP_173050720.1\|490091_491483_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273258
NZ_AP022849.1\|WP_173050740.1\|503990_504890_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_AP022849.1\|WP_173050742.1\|504996_505728_-\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225516
NZ_AP022849.1\|WP_173050718.1\|489342_489918_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|285957

Protein	Function_ID	Function_description	E-value
NZ_AP022849.1\|WP_173051179.1\|495332_496022_+\|RNA-ligase-family-protein	gnl\|CDD\|378183	pfam09414, RNA_ligase, RNA ligase. This is a family of RNA ligases. The enzyme repairs RNA strand breaks in nicked DNA:RNA and RNA:RNA but not in DNA:DNA duplexes.	1.4359e-05
NZ_AP022849.1\|WP_173050731.1\|496663_499900_-\|hypothetical-protein	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	3.69802e-66
NZ_AP022849.1\|WP_173050720.1\|490091_491483_-\|AAA-family-ATPase	gnl\|CDD\|273258	TIGR00763, Lon_protease, endopeptidase La. This protein, the ATP-dependent serine endopeptidase La, is induced by heat shock and other stresses in E. coli, B. subtilis, and other species. The yeast member, designated PIM1, is located in the mitochondrial matrix, required for mitochondrial function, and also induced by heat shock. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.2222e-23
NZ_AP022849.1\|WP_173050740.1\|503990_504890_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	1.54813e-13
NZ_AP022849.1\|WP_173050742.1\|504996_505728_-\|SIMPL-domain-containing-protein	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	2.50696e-35
NZ_AP022849.1\|WP_173050748.1\|508121_509048_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|236338	PRK08788, PRK08788, enoyl-CoA hydratase; Validated.	9.4624e-84
NZ_AP022849.1\|WP_173050718.1\|489342_489918_-\|hypothetical-protein	gnl\|CDD\|285957	pfam08805, PilS, PilS N terminal. Type IV pili are bacterial virulence-associated adhesins that promote bacterial attachment to host cells. In Salmonella typhi, the structural pilin protein PilS interacts with the cystic fibrosis transmembrane conductance regulator. Mutagenesis studies suggest that residues on an alpha-beta loop and the C terminal disulphide-bonded region of PilS might be involved in binding specificity of the pilus.	4.70027e-13
NZ_AP022849.1\|WP_173050739.1\|503344_503986_+\|DsbA-family-protein	gnl\|CDD\|372611	pfam13462, Thioredoxin_4, Thioredoxin.	2.56427e-43

>NZ_AP022849.1|WP_173051179.1|495332_496022_+|RNA-ligase-family-protein
MPTSPGLGRGDRMLKDLCTFEGERVIMTEKRDGECSSLYRDHTHARSLDGRHHPSRDWLRAYWSAIRWDIPELWRVVGEGTYARHSIAYADLPSYFEGFGLWNERNFCLSWDETLEWFALIGSSAGLSVTPVPVIYDGIYAPEAIEEAWQAYLARDIAQAEATGRPLQQREGYVIRTAAGFAYRDFRKHVAKWVRPNHVITSEHWMHAEITPNELAEDRDEAPVLRPVP
>NZ_AP022849.1|WP_173050729.1|493938_494760_-|hypothetical-protein
MSRVINSLKVLFSDAGSNTVVIAALLPGIYKSIVHLGSEVGIIDAGGSIFEQVIWSTVLAAAAFSGGSTSRMPMVFWSWVVGVAVLHLLIAVNTSGLGAMISYAFAAAVLMGALSGRLYASAMRARSVRGFAVGILGGAVAASFALAPMWNISSRFQEEASAITAAGSRLLDEYREIAKDGAPEPRAHFQAMNRFAQAILKSPFNDQTAVLRRHMDFDAFERFRLGAIECKAVGGGERANCLEKLGALEGLHGPSDTRTAVLLKTFKIALGKA
>NZ_AP022849.1|WP_173050727.1|493012_493942_+|hypothetical-protein
MHAIPAFMPTLASPWSEQDLRSTLPTHEIPNLAPTRALMREIGFDEDDLAELFVNPKTETILVDPKAWFWTDRKWWKHTRPETIDKMYRVAGGCFAELSLSEQAAMLGLEIEEIAGRPSRAGRGMWVLPGGPVGTVEDLALAHYRERGYSGTASEGKALNGINLMNGQVFQRRFGHWLGFDETNQRQHQPGPEYAAKVLLSAREVLANVREVYNERKSYYLGLLKAPIEEIEAYIATVGPDHILRCVEHRYVHGATVFSGHFDLTLRGESLRFVEVKAKDRLHANQADWVRSVARPLGLDASIARVVKS
>NZ_AP022849.1|WP_173050725.1|492474_492900_-|hypothetical-protein
MSNHPRTVSMEFDIADLAMMAHALRIERNSQLGTRNDIARQRADTIAKRLSAAAPTVSRYFDDAVFCELVIAVYETSEPTVEIERPSWRTWGKEGFITVTAGDRKYRSANSDHLPECAALSEIRDFLAEVSPMVTPATPGP
>NZ_AP022849.1|WP_173050723.1|492043_492427_-|hypothetical-protein
MKIEFYGVTPEGLREVVRVGRDGLYRLTPAMSVVDSIVDEVSEQIRQLVVREIDHKDLELPKRGEPHKCFAIELPAGQWRIIKDAIMAFGFNDNIGSKLLIDLKNVVMSISLGLEGAEAAPSRAVAR
>NZ_AP022849.1|WP_173050721.1|491601_492093_-|hypothetical-protein
MVSKALKPPRRELWRADRRDGLIYCLLDAEKRHFEDAAVRVRHFPGRISALITRRELEILRTMAAAEAEGRYEEAEIVTAGRECWLDVELISKKTVLGLLRCMAISVDTSGGATERYTINAAGRAIARRPELAREIQEAVVVGRPFEIEDDHVRFLPEAGVAP
>NZ_AP022849.1|WP_173050720.1|490091_491483_-|AAA-family-ATPase
MVGGELGFLASWRLPDAFTTRQIDNVFDWMRTRAIERVPALARSFFVPGKPPKDVAYRAASEPTKIGLSVLACDEIRTWMWLAAQKGHVEAIQQMVVITQACALSKEFAEQRLTLDNLSSEWMETLGRLTDSGQGTKSMADKHSSTLAPVVDDAEELEEIGFGTTVITKIGDQDSREGGEISKRYRALIGRKLPFLGELPEPRRIGDAIRQRWPWAEMAAERIENRFAVLRAAEGDRPITLSPMLFVGPPGSGKSTLARFVCEATGLPTTVLPLGGVADGAGISAVTRSWATTRPSAIVLGMHEHNCANPAFVLEEIDKTSRSTSANGSAADALLQLIGSGTYHDLCLMAPVDISNVTYVATANDLRTVQPALRDRFSLIQVPAPRSQDFEILLDNAREDFMISRGIRPSRMPHLTSKDLHALRSWFASNRSARSFADAYETLVSAAIAEFENAAPEPGMLPH
>NZ_AP022849.1|WP_173050718.1|489342_489918_-|hypothetical-protein
MTSITANSFKVRARATARRVRRGLSLIEAAAVLGLLMLVVAGAMLLYQNASTNSRVAESASQLATIQQNIRSTYAGAAGFTGLQNSTIANTLPAKMNAGGGALRHAFNGTVTVLPTNTGGGTDSGFYVSFTGVPAEACQKLATMDMGRAIVGLVIGGATASTTTPPPFTPANAQNGCGTSGTTTMAWTVAG
>NZ_AP022849.1|WP_173050716.1|488780_489272_-|hypothetical-protein
MNEMATITESYDRLAEETQRPCNSVSFWKTVTGRWGARAGLGHTEFGDTIESAIEAAVTSAIAVQLQRSEQDLRSPASEVPPRGQILTLVKPAPKRPDPEQVIKDYLAAFAEANPDSVPPLVQPSKGGWYLIRSYGVVGNGTPHRLSSLEAMTARLKARATAS
>NZ_AP022849.1|WP_173050714.1|488169_488688_-|hypothetical-protein
MLKILDRVDAYLIDQVNAWVTELQEKRGFTWPAILVGSHLAMIAILGLLTLASAVFSGLMEALVWAIATAVVGPFLWLNVSDFREAGVRRAQWKDTEIPSLLKFADGCRKQMLSLRRQLMVAGPVIIVLALREGGGLAVAVPLAIVMFLNQYLLCSYATAPGGKAERAVLDT
>NZ_AP022849.1|WP_173050731.1|496663_499900_-|hypothetical-protein
MKRRVAISQGLLQHFYMGIRFSFDLGTNSIGWAVWRTGVDPRGIFGVDAPLEILRAGVRIFKDGRNPKSKASLASERRAARLARRTRDRFKLRREDLLKALAKHGLFPEAGEERLALAKLDPYELRARAVNEALATFEIGRALFHLHQRRGFKSQRKGVAQDEELGKIAAGTERLKIALAALGCSTLGEFLWQRRGERKSTRIRLDGAGNQALYEFYPTREIVQDEFQAIWSTQAAYHPAALTEVAKAEIEAILFRQRPIKPPPVGKCSFTDELRAPKALPSVAAREIYERLNHLRIGYDDGIRRPLSVAERDLLATELLRSAKLTFPRARKLLGLKAGVAFSLEEAGEKHIPGFKFAECVHMETAFGGRWDSLSWGEKDAIVSIVLAEEEDLDAAERLVAECSVPAPEARAIAAMIRVLPDGYSKLGLTANAAILEALATEVTADGSVVTFAEAVLRAGRAIGYDWHHSDQVRRSGRPAPEVSRQLPNYAVILPDQVMPALPGEEFGRFTNPTVHIGLNQLRKVVNELLIEFGHPSQIVVELARDLKQTEKQKKATAASNRANAKLNDKRRDLLQSLGVRVNGDSMLRLRLLDEQTGADGKARCPFSGQEITQAALFTGEIEVEHLLPMSRTLDDTAANKVVCVREKNREKRGRSPFEAFGDRAEWPEIWSRAKALPANKSWRFKPDAMERYEKSDGFLGRHLGETRHLSRIAQQYLQAICVRFDGATGERVYGDVFVTPGEMTALLRARWRLNELLGDTGSKNRDDHRHHAIDAIVIGTMTRGWLSHLACEAGRYEGGERADLVKAVAEPFPGFRDVVKAAVDRVVVSYKPEHGIEGALFKETAYGLVSEKHSDHRAGNVVYRKPLASISAKEVAKIRGQELRAGALGAIDGVDPENKKLIAAHLNRFGEEQGVRRARLLGVENAVVPKADAQGHEFTALKRDGIHHMDIVMLRDGSWKMYPAPITDVNRRGFRPSWEVQKVGGKLAMRLHKGDMIELDGDEGRVIKVVIKFSESGQIVVADHNAGGNLKTRDADKRDPFRYQSASAEKLRGLNAIALNVSPSGVMRPRRIDAGEI
>NZ_AP022849.1|WP_173050733.1|500444_501626_+|hypothetical-protein
MRFDVPFAYELAYLKPRGRIPQTVLIADRVSVEMGSVGDVDAPVVIAGCFKANQRLGPETRQHEPFERRLFDGRLFEVLHTHSTPTIAAYEFSEQDRREGWRWTEGYTVEALRRRLNSPENTAKLLAGVIGGEVPYKPKIHDERPAGIDRVVHDGRDEMVQRIRDAFARLVLVDDRVHFQTLPPGIGLTLSEALHCPLGQRQAEIKLHAFNRSRLQVESNLEFTFDVSRYDQALEFSAAIARKAKSAIPGSEVEILNPLSPQIDRYDVTPSFPEARVAALAAINRTMDMLLGRLGGPHVGSPNLSPEALRLGAELAETRNDIIAGNSYAAGRAARLVEKAAEQHWNGYSAHHRLFSNFAHLRADLTTAAVDHACIEAALVEAEEPDLANLVPM
>NZ_AP022849.1|WP_173050735.1|501706_502768_+|hypothetical-protein
MFDVEIEEASLTDAPEVIRGAYLPQFGERIDFSRRLHGLHLFEAVDWSLSGETATLRHQRRVDLSRRDHGLHLFESVDEGFSGQAAALRYLGKVIERHFPSRHHAEADVLEALPAKARTIHSNTREGVEAFLLKKASELLFVDGVLHERTPAPAVSVELRGGAFLASGGLQPQGEITLGLGKGDSTERVTFLFDVAHREQASELALFARHLVPSASITENATIEIERYDVPASIHQARYAIRAALAELNVRLNSTPTSVPRFPGEVRETKLSAAIKEAARLRTLVLQEDCEPDSLLHQAKDLLDSVADVIKAKPERFRAISGIFTLAEFAAANSPNDLSLISRDDPELANFNF
>NZ_AP022849.1|WP_173050737.1|502775_503228_+|hypothetical-protein
MLDKLLATGVPEEWRHGRCYPMASALSDLLSLPVVTLTVSTRSDHSPTGWREHVVHAWVRSPDGEGFDAGGFFDESGVQTTFLANTGTIWRNARVIEHADSAALFSHLVECFPEAMDPTHRLHFDILCQQASEVAQEHLVHLAMPALTPA
>NZ_AP022849.1|WP_173050739.1|503344_503986_+|DsbA-family-protein
MTFAVLTRRGAIAGIAAALTASTTLAQAEDPPAVTLDKLLEATDVPDLWIGDPTAKVTIVEYASLTCTHCARFHEDVWPELRKRYVDTGKIRFVLREFPLDPLSLAAFMLARAAGADRREAYVDAFFRKQSEWAFNGRPLDTMPALTAQLGMKREEFDAVLKNEALLTSISQVRVRAQSQFGVNSTPTFFVGTERLVGARPIANFEAAIAAQG
>NZ_AP022849.1|WP_173050740.1|503990_504890_-|trypsin-like-peptidase-domain-containing-protein
MLAGVSFAQAQLAPIEAYRQALLPCLRQAKSCDLAKLTASDRDYLRYELGRSKLSAADVAAVAEARMTQFRYGPIPSEDKELPSRLRKATVMILARHATTVSEGSGFFVAPNLIVTNRHVIDGSPQTIMVLSSESRLPLVGQVAAMTPDHVVGNPDLAAIWVSPVEGVEILKFASPDSGSVIAAGFPGKAIGPEGFWRRAQVGDFTIPTLTLSQGLTGAIEMSQTGVELIRHAAVLAKGNSGGPLIDSCGRVVGVNTFIRGSQSYALSTPVAMKFLRDAKLPFAQDESGCKPAAVASGR
>NZ_AP022849.1|WP_173050742.1|504996_505728_-|SIMPL-domain-containing-protein
MRRQSIIALAIVTGLSIPAVGQDDQPAPRPPNITVSAEATRDVVPRIAMIQLSIVAEKPTSRAATDEMARLSAPVIAEIRSQGIDALDLKTDFDLSLVWDDTRGVFLQSKETLRGFRARNTLTIRLHDIARAGALAQILIDKGANHFEGISYMVGDDKRQSDELISEATKEATRRAGIYAEAAGVRLGRVLQIDTAPVAPGATEPPVLRKSTLRESIPTVVPFNPGSLQIRSRVNMTWEILDR
>NZ_AP022849.1|WP_173050744.1|505844_506909_-|hypothetical-protein
MKTMPIDIQVRVPFKVLRGRSKKPEKIQVRVPLAGEIKLIESLDQAPIALRARTVEGPRSDEYERRVIEVDGKEVLVRPIMRSSWEKIRARIADARAMLADGFHHSLKVQTPLHIGWGNDVFDVLPLDTRAVIEDHTDSAMKLARDTLDRVFAIEDTLFLRSAPPAFDLYPPTKTGGDRGRFNVSDQVDLAPGYQSNGFAFMLDRVDDAVAFAKRHGLNDIPPEFSSFRIDRPDLLTSGETLANAYMGVRTIEFELQEALADLSAAGLEQLGRLLTQRERMVEEHGGDAVWAIIDELDDAVANRFYTPALPPRIFDRIAKVTDMTKDALTMSRDLPPRPVIEFGDDPELANLGM
>NZ_AP022849.1|WP_173050746.1|506905_508003_-|hypothetical-protein
MLFAGHSTRFLPTEFAMESAVSSKLKVTFTVGQSARLDQPGVVIPLEIELPEKTGEIALRANAVVQLGKFEMPQLVERLLVDDVLFRPLPLEEAAGRSVAAAGAKAVSDFIISTLASRGTHDVVAAAKKTAVRYKDASSEEKVSADRYVAEIERIIADETLFNRNRVWGAAPPPAIVVKHPIYPAYNQGGPRMGWSELTLNDLGADPGEFAFGITRLDVAGKFLADYANIDKNEKRLSDNFVRRLEIDTINEDVILFDEQSVNVAAGVRMLLNSLKERFAIIGVDGRAPLIEIAKLREAALAGEPDGAARLLRAFRDLGRNRFNLYDEFTDKRRRFLEKSLVLAEGAFEISQPAPAPAAGRGVRP
>NZ_AP022849.1|WP_173050748.1|508121_509048_+|enoyl-CoA-hydratase/isomerase-family-protein
MELVEHVPARTFTLPHIATGRPASLAVRLDEICREFTAFRMRFDEATGILWATMLDNPFPSFAPAMLQEMRLATTAVRLAAEQGLAQGLEFCVLHSETPGVFNLGGDLATFARAICEGDAPALRRYARHSCDLVYDMWSSFDLPVTTVSFVEGTALGGGFEAARACNVVVAERGARLGLPEVKFGLFAAIGAISLLTRHVPWTVVQRLMIGGEVMLAEDLHALGVVDVLLEPGSGIDGFLRYLNTDLRREKPTRSLVQAARRRVAPLPISELYEVADQWIEAAMALSPEDLRRMERIHAAQRRHLQRA

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Crispr_ID: NZ_AP022849_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022849_2

606372-606869

TypeIV-A

Consensus_repeat	Method
CCTATGCCG-ACCCTTCTTTTGCGGTTGGCCGACAAC	PILER-CR
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	CRISPRCasFinder
CCTATGCCGACCCTTNNTTTTGNGGTTGGCCGACAACN	CRT

7 spacers

DinG,csf2gr7,csf3gr5,cas6e

The CRISPR arrays of NZ_AP022849_2

>merge|NZ_AP022849|2|606372-606869|PILER-CR,CRISPRCasFinder,CRT
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAACTGTAGAGGCATCGCCGCCGTCAATGACGAACCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAACATGAGCGATCGTTTCACGATCTGCCTGCCCCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAACTTGTTGACCATGGCCGGCACGTTCACCACGCCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAACGTGGTCGCCTGAGCCTTCGACAGTGACGATCCTATGCCGACCCTTCTTTTGGGGTCGGCCGACAACAAGCCCGAAGCCAAAATCGCCCGCGGTGATCCTATGCCGACCCTTGATTTGGGGTTGGCCGACAACTTCGATGAGAGCTGGAAGCATTTCGTTACTCTTATTCCGACCCTTGATTGGGGTTGGCCGACAATTTGATTACGCCAAGCGTTTCGTTGCGTATCCTTATGCCGACCCTTTCATTTGAGGTCGGCCGACAAGG

>NZ_AP022849|2|2|606372-606670|PILER-CR
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	TGTAGAGGCATCGCCGCCGTCAATGACGAA
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	ATGAGCGATCGTTTCACGATCTGCCTGCC
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	TTGTTGACCATGGCCGGCACGTTCACCACG
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	GTGGTCGCCTGAGCCTTCGACAGTGACGAT
CCTATGCCGACCCTTCTTTTGGGGTCGGCCGACAAC

>NZ_AP022849|2|2|606372-606737|CRISPRCasFinder
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	TGTAGAGGCATCGCCGCCGTCAATGACGAA
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	ATGAGCGATCGTTTCACGATCTGCCTGCC
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	TTGTTGACCATGGCCGGCACGTTCACCACG
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	GTGGTCGCCTGAGCCTTCGACAGTGACGAT
CCTATGCCGACCCTTCTTTTGGGGTCGGCCGACAAC	AAGCCCGAAGCCAAAATCGCCCGCGGTGAT
CCTATGCCGACCCTTGATTTGGGGTTGGCCGACAACT

>NZ_AP022849|2|2|606372-606869|CRT
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	TGTAGAGGCATCGCCGCCGTCAATGACGAA
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	ATGAGCGATCGTTTCACGATCTGCCTGCC
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	TTGTTGACCATGGCCGGCACGTTCACCACG
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	GTGGTCGCCTGAGCCTTCGACAGTGACGAT
CCTATGCCGACCCTTCTTTTGGGGTCGGCCGACAAC	AAGCCCGAAGCCAAAATCGCCCGCGGTGAT
CCTATGCCGACCCTTGATTTGGGGTTGGCCGACAAC	TTCGATGAGAGCTGGAAGCATTTCGTTACT
CTTATTCCGACCCTTGATTGGGGTTGGCCGACAATT	TGATTACGCCAAGCGTTTCGTTGCGTATCCT
TATGCCGACCCTTTCATTTGAGGTCGGCCGACAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022849.1\|WP_173050977.1\|610580_611066_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050979.1\|611067_611562_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373919
NZ_AP022849.1\|WP_173050988.1\|614140_614848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050966.1\|601586_602231_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|215025
NZ_AP022849.1\|WP_173050973.1\|607500_607731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050969.1\|603026_604142_+\|hypothetical-protein	csf2gr7	cd09706_csf2gr7_CAS-IV-A	gnl\|CDD\|187837
NZ_AP022849.1\|WP_173050971.1\|604147_606361_+\|hypothetical-protein	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_AP022849.1\|WP_173050975.1\|609149_610568_+\|ATP-dependent-zinc-metalloprotease-FtsH	unknown	unknown	gnl\|CDD\|273520
NZ_AP022849.1\|WP_173050962.1\|599648_600467_-\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|366523
NZ_AP022849.1\|WP_173050955.1\|594953_597026_+\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_AP022849.1\|WP_173050981.1\|611632_612586_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277358
NZ_AP022849.1\|WP_173050964.1\|600705_601566_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050985.1\|613564_614140_+\|YqgE/AlgH-family-protein	unknown	unknown	gnl\|CDD\|234694
NZ_AP022849.1\|WP_173050989.1\|614844_615225_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050960.1\|599400_599652_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050991.1\|615555_616419_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050983.1\|612578_613412_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277367
NZ_AP022849.1\|WP_173050958.1\|599218_599392_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050967.1\|602227_603016_+\|hypothetical-protein	csf3gr5	mkCas0093_csf3gr5_CAS-IV-A	unknown
NZ_AP022849.1\|WP_173051188.1\|597765_598959_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP022849.1\|WP_173050983.1\|612578_613412_-\|metallophosphoesterase	gnl\|CDD\|277367	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	6.66255e-62
NZ_AP022849.1\|WP_173050985.1\|613564_614140_+\|YqgE/AlgH-family-protein	gnl\|CDD\|234694	PRK00228, PRK00228, YqgE/AlgH family protein.	3.39544e-39
NZ_AP022849.1\|WP_173050966.1\|601586_602231_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	5.13354e-12
NZ_AP022849.1\|WP_173050969.1\|603026_604142_+\|hypothetical-protein	gnl\|CDD\|187837	cd09706, Csf2_U, CRISPR/Cas system-associated RAMP superfamily protein Csf2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Contains several motifs similar to Cas7 family.	4.96932e-16
NZ_AP022849.1\|WP_173050971.1\|604147_606361_+\|hypothetical-protein	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	9.26184e-44
NZ_AP022849.1\|WP_173050979.1\|611067_611562_-\|hypothetical-protein	gnl\|CDD\|373919	pfam15523, Ntox16, Novel toxin 16. A predicted RNase toxin found in bacterial polymorphic toxin systems. The toxin possesses an all-alpha helical fold and conserved (DNE)xxH motif and arginine residue. In bacterial polymorphic toxin systems, the toxin is exported by the type 2, type 6, or Photorhabdus virulence cassette (PVC)-type secretion system.	4.46133e-19
NZ_AP022849.1\|WP_173050962.1\|599648_600467_-\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|366523	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease.	5.18102e-53
NZ_AP022849.1\|WP_173050955.1\|594953_597026_+\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	7.48236e-81
NZ_AP022849.1\|WP_173050981.1\|611632_612586_-\|metallophosphoesterase	gnl\|CDD\|277358	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.42465e-69
NZ_AP022849.1\|WP_173050975.1\|609149_610568_+\|ATP-dependent-zinc-metalloprotease-FtsH	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.63547e-167

>NZ_AP022849.1|WP_173050971.1|604147_606361_+|hypothetical-protein
MSIVHDLFSNPESEFFSIGLGGRLGKPRAAQAQFAEAVEGLLDQRSGIGIIQGETGSGKTAGYLVPALLKAAKTGALVVISTNTLNLQKQLMKDALPSALVLIERLTGKRLRAARRIGRQNFISLPGLQIKINDLAREATPNSALVKLLGRIHAELSIDPANATKQHVSEAFGQELGEIGVPAHFFDQLQIGRVDGDDYAYLKMLDDSVNCDVLVTNHALLTYNLMCSGGFLYDVKSDDRRPVIMIVDEADALASMAASLATRKLPLRDLDYAASRIDVAKATRTRLNKCLKNIAASFDQARDAGAILNRPSDIAIMPLSGQSNLQKVLLGEIEEVEGILTTCMSKDGLGTMRRYDLDTIVRDLQAIRANLARQGGASSEILSLYWSPIRNFPGFHIDGGDAGRIISRLWRLEHLRPATLLFTSATLTGAADRGIPMAGFAREIGMGQRVLAETVCAAFAPEQFGSMDFVLIDPRIAPPVTIRNDGDDDDTNTIANPAILPWWCGMIRAASDKGGRILVLLPSHRDASLVRDALGAIDGRRILLDSRDEGAQVLRAFETDASAILISAIRWEGLDMPGKIRHIVIPRYPLTPRDVVRDALREESLLARGYKKSSIRAQAFMASLSQARRKFFQGAGRGIRIESDSVTIWIGDSRWPLSDDRRERHPEVISRNWASSMVYAVPQRFRSNLDNAAIYSLASGVGPFESIEKERRQSRLSAFLDKIRPRREDVPDALPRL
>NZ_AP022849.1|WP_173050969.1|603026_604142_+|hypothetical-protein
MTKHFDVRFIGTMINRSPLHITPPNTQVKEVPNFSDAKAVEIATLPVYRDGVLRHLPVIPASTIRGKLRNAATRVAMRHLAEKPSREAYVYTSLGGVKGSEDENPFAIADRNQRRHVNPIIGLMGGSQPWDRSSAFISNAIPIDIVEPHFVTSARVDAMRLKSDLVDLLDQNAVPSYLKMREATRDKVEAAKKVTDAKKAFAIEKGSNGNADASALEAAKAEHEKAKGTAGNSLALPIAHRVMPAGVVMDQTITLQRVTAVEAGLFLAALNYLFDEDPFFGGKVSYHYGAVDADWKVSYREERGGKWIDAGSLAGTTFSPTTYDGAVLEEFASAWAEYAASGALDLTPPTHKSAGDDTSTSGTAKKGKKAA
>NZ_AP022849.1|WP_173050967.1|602227_603016_+|hypothetical-protein
MTAFILSLRTVTPVLLNRWLTLDAMLDGIQTQNGLAPEERILPLLAFDGRQKRAGLTALDASSGNLVFCASAAIPGDATIRIVDPVDETKSGRASIPHPAISSVTFRGGLRPNEAFKHDVEYPFATAAKVFDVKRGITAGFLSTQRMILPGRFEWLAQGDPDEVRRILAETPGIGAKVNNGFGQLDHASIRTTTVEDAPDLFGIVDEEGERLMRPAPADLLAGRSLNEFRHRIETCRPPYWDKRGQVHALVPKTIFDALLTR
>NZ_AP022849.1|WP_173050966.1|601586_602231_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MNAGLADAIAADWYKIHRLLHDQIGYRVLGMGEGQTSRWLFGADPRAVIHEPDAHARFIFVRTLPELSEAIAPLSVHSCDTFIPKLGDTVRFFLNVSTKRSASFDFRSFVLTQRPREGETREQAAWRVIASDFVANSGLELVGDLDAAHQRRFEVNKIDKRRSQKVTKHAIFASGCATVTDLEKVRRAILEGVGRDRGFGFGLLVLEPMAGGQA
>NZ_AP022849.1|WP_173050964.1|600705_601566_+|hypothetical-protein
MTGLLSRSYVSTNLPLSVVSVLLCPYDFFARNGGCALLSANGYSGDAPLQKLLASSWPTWPKPETAEQATPGAPEKIRTTRPGAAAVHCTILAWEGGLSIYSPACLQSVPGVTVERGLSVPRTYELAWNSLSLPRPLLFMTIGPSYQPALKAARLTLDPDLVEGVGQVSFLLDRERVELVTLCAAYMKTTPFKLRALKGSIEHAIALEGRSPKSTLQGKTINHPRHPLMVKQVRKALGLPAKANPNAFDAEFAQQHEFWENVSRLPMSDDPAWAIAEAIQNPKKAS
>NZ_AP022849.1|WP_173050962.1|599648_600467_-|DNA/RNA-non-specific-endonuclease
MRKTILASVFLIASMLTANAAPTQCPVFFAGGVAPDVGPSLSQKVRPLCFSAYALLHSGVTRSALWSAEHLTRDNVRSARSLERQNLFHAETALPVGERAELSDYVRSGFDRGHLAPSGNMPDEIAQAESFSLANMIPQNPDNNRNLWAAIETAVRDHAVRSGELYVVTGPLYIGKDLQALRNRVLVPTHVFKAVYDPRRQTAAAYITANGPGAEWKTVSIKELEALSGIDVFPALSSAAKTKLASLPSPAPRASRTAQQEGWVARTLRRLW
>NZ_AP022849.1|WP_173050960.1|599400_599652_-|hypothetical-protein
MKPFSDDASSVTLAGLTIENGTSEIAIYGDLRLRADRKGLEAATELARFFAEARDKLASQPNLPDAVDTVDASAVSTVRNPFG
>NZ_AP022849.1|WP_173050958.1|599218_599392_+|hypothetical-protein
MSSTRAFVDLVNELRREEGRFPVPQGSYPTNERFLEKLVREMREASARKSGGLKAAE
>NZ_AP022849.1|WP_173051188.1|597765_598959_+|hypothetical-protein
MALRPIAFSAGPNSVSEADIQALVHQFPGSLPINEIDPMFSGAVSVCTELNTPAGPIDNFLVTASGLPVLVECKLWRNPEARREITGQILDYAKELAKWSSADLHREVNRRLKRHDNALLEIVRRVNPAVDEMEFNDALTTNLRRGRFLLLIVGDGIREGVETIAEYLSAHAGLHFSLGLVEMPIFALPDGSRLAAPRVLARTTVITRHVIAAPADHIVVEASEPTERRTPATSTETIAAGEAYVRFWSEFLDGLTLDDPEQQKPKPFKLGYLSFSMPAPAGSSWLNVYRDMRRGVMGVFLASTRNTAGEYASNLIAEEWETVSKELGGSAIVESDDHGRPRIIDYKVFGSLDDAGTRTKAFEWLRERTNTFVNVLRPRVRSAVADYSASGAANVSG
>NZ_AP022849.1|WP_173050955.1|594953_597026_+|response-regulator
MTGSASVRFSPFRPRTMALLALAASVPLVLLASFAGVLILRQQQEEMQETAREATFNLADTLQREFDAQINVLKVMAASRAFDNGLDLYEFRDLAERSLTTQPNFTAITLNDLTGVRVARVPEDSHIGEQAKDILSHELTVATQQPSVGNVTQFPEEGPVFAVRVPIVRDSKIKGVISTTLKPSVLVALLQASRLSPEWISLVIDGNDRIVARAGDQGDFASQPGSLASEPARKARHTSDAGVYAGRTLDGRATNAHYRMLPGLRWSVHVAIPDKIYQEPVRRSIFLAVTAGIVALAISGVFVTLLLRELRRGQEVGRKVEDGLRLEALGRVTGGVAHDFNNLLMIMMGGADILKSRSGDSTRVQMIADTIASAAQRGRQLTTHLLAFARRSSHDPISFRIQDRIAHLAVMIERAINPDVRLQISIDPNTPAILADPNAFEVALINLAVNASDAMPDGGILTIRAHAWNTFRSPNSVSISVTDTGAGISQEFQEKIFEPFFTTKPTGKGTGLGLSQVHGFAYQSGGDIHVRSEMGQGSTFTLVMPRSNAPPVPSPLPIVSNDEVEGGRLLIIEDHVEVGSITGEVLRASGFKVKLVESAEEALDVIETDKAFDAVLSDIVLGDGMSGLDAAPRIQSALPNAAVVMMTGYSEALARGATCGFPLVRKPFDQAEVVRVIQSAIAQGPNREAA
>NZ_AP022849.1|WP_173050973.1|607500_607731_+|hypothetical-protein
MADNGTVYLALFTALCRTLLLGLADNEKTTSATANSPMPTLLWGLADNSAVRLSVSFEPMPTLLLGLAENAMQSIA
>NZ_AP022849.1|WP_173050975.1|609149_610568_+|ATP-dependent-zinc-metalloprotease-FtsH
MAGLVVWLLRTARSKMAIADFVKPRDIKDRILFQHVAGADDGKEALKDIVDYLRDPSRFEAVGAKPRNGVLLVGDPGNGKTLLAKAVAGEAGVPFMACSGSQFQEMFAGVGAARVRSMFKKLRKAAPAILFIDEIDSLGKKRSSSSSSVENDSANTLNELLTQLDGLTSGSGIVIIGATNRVEVLDPALIRAGRFDMHVIVPSPDQKARTEILKVASRDVELADDVDFATIARGTSGFSGADLAILVNEAAILAGKRSAHQVTMADFDQARDNKILGGTRGTLMIDPAELETIIVHESGHALANVLLPACDPIHKGTVTPRGRSLGHIATMPLKDRVLVTRTKFLSELVMLLAGRAAEEIFFGADMVTSGATSDSDLATTTAFDMVARYGMGSSMASRVGSSRPLSEETKRRVDEEVEEIIRASYERAKELLLANKPALDRLCARFREEDTLDGDEIRRIVAESSPAVSAAA
>NZ_AP022849.1|WP_173050977.1|610580_611066_-|hypothetical-protein
MKSLIDIVSDAFPPELSYGAVPIEELYEFYSMESLGRPVANWTEITEEDLRHGHFGALLQMMLDGTFVNWLPAWLVMVPACGGEVRKALAAFSGCLSPRASAELGEADRLAERVSWLNSAQRKAVAAAGRELAGKHIEFFGFDAGSDIAEAWERYASEAPA
>NZ_AP022849.1|WP_173050979.1|611067_611562_-|hypothetical-protein
MKILMLSAALLLAAVAAQAQTALMPSPGAIKMGVGVGGGILAYKAAKACLDHKISCAVAIGGGAALVHKFKKDAGLPPPGDCGPEQFRRLNAEVERACKSPTPLRCLRTDSAAILENKADKFRFCAVARSRRETLCFRGGDKNHKTQINQVNNAYRNCVELAGI
>NZ_AP022849.1|WP_173050981.1|611632_612586_-|metallophosphoesterase
MADRLFIGDIHGHADELEALLAENGFQHAGGAWRHPSMIAVFCGDYIDRGPRQLDVVDIVRRMVDAGSAAAIQGNHEFNAVAWATEIPDEPGRHFRVRGTKNRAQHAAFLDAVGNDSEQHKEIVSWFRSLPLWVEFDGAVAIHACWHRDLQAELSGLTDANHVLTEEGWFQALTKGARAYEITETLLKGPEVALPPGVTFFDKDGHERKNTRVRWWDNEATTFRSAAIVDEETAAFLPDEALGSDWLADLGEERLVFFGHYWMAGEPRILHPRRTCLDFSVAKAGHLAAYRHEGETELDPEHLVWAGKPVPGLRPAG
>NZ_AP022849.1|WP_173050983.1|612578_613412_-|metallophosphoesterase
MLKRLPKPAVKRLPLNTKGKDLIVGDIHGMFDLVLRAMEKMNFDQSRDRLISVGDLIDRGPGSHRTAKFLSCSFVEAVLGNHEGMLLEAYQGGDAHPAVLEFLHSRNGFEWWRDTPDELRSDILDALWKLPLALEIETDRGLVGVVHADVPRGMSWQAFTGALEAGDADVAECALWGRDRIHKLDESGVQGIGRIYVGHTPLRRVAKLGNVVALDTGGVFGLGREEGALTALDIATGTMEIRTVHSMMRPDDLVFSGPVGDAPDTAFSFESVGMRHG
>NZ_AP022849.1|WP_173050985.1|613564_614140_+|YqgE/AlgH-family-protein
MITNLAGHLLVSPPGGTSRNIVYVCEHADADHTAFGLRLGNPVPELDFSQVLLQQEIITPEESLILPDETKRIPVLHGGDNDGRRGFILHSSDVFLPDQTQKISEMISLTRTPDLLRAIGRRSGPRRVLFAIGSRAWSPGAVTKEIFEGDWLVCPGEPEIVFGANPEEQYAMALAQLGLNAATRISAPGFA
>NZ_AP022849.1|WP_173050988.1|614140_614848_+|hypothetical-protein
MPIIARNHRQDAWQPLKDWPSDTYVQWGGRGVVLRADDKGGSYSTAFFEAMPAGGGFIRGEGKSIEEAEADAFSRFEKEAACRPHRWGRRGYTNGGAKCLRCGSFRTAFKSIYEIGAWRAPLSATELSLLQMGGTRQRADDAPDVNRRRRHLYLRARLAGLTIPDAGDETDEDDFEQICRVAVARWFASRLPEMTSPEERPKSSLMGEVFDRMHLRSLMRDAIELGFLPPEMAPA
>NZ_AP022849.1|WP_173050989.1|614844_615225_-|hypothetical-protein
MSAPRIVYFAHMQFMGQTEGGILVDDRFFAMPGGPGSQALQAELNKRGTLPLRQPLPAQAYPQFKLRSELGAIENAWARLGSLSEADIANAVRGDKTAWARAYDRNRVVAISDRAIFEEFLWLHDA
>NZ_AP022849.1|WP_173050991.1|615555_616419_+|hypothetical-protein
MSAQDAPVAFRVKDQWARPVDQTYRWRDSKLWAKALLREKPVTLEVFVASLDGTSHELNPTSRHSDRILERELDIQEVHHTDREEVERKVRSAASEMMFVDGVQWDVVEEPFLAADMERDYPSVRVIEGSDRRPAFQSFRLDELDLIKELHAERIGRAKGFREPDLIEILIPEAVQHRFEPELLLATAREVSRTMADRLALLDAPYFVAFAGLRDETYALEHKLRTDPFASLGELSLKLREALQQITTDRTKHDLGGAWFEEEKLRALARVDRYVGEIELGTLDMKP

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Crispr_ID: NZ_AP022849_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022849_3

607215-607711

TypeIV-A

Consensus_repeat	Method
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	CRISPRCasFinder
NCCTATGCCGACCCNTTCTTTTGGGGTTGGCCGACAA	CRT
ACAGCCCTATGCCGAACCCTTCTTTTGGGGTTGGCCGACAACGG	PILER-CR
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	CRISPRCasFinder

7 spacers

DinG,csf2gr7,csf3gr5,cas6e

The CRISPR arrays of NZ_AP022849_3

>merge|NZ_AP022849|3|607215-607711|CRISPRCasFinder,CRT,PILER-CR,CRISPRCasFinder
CCTATGCCGACCCTTCTTTGGGGGCGGCCGACAACTTGGAGAGCTCGTCGGTGATCCAGGAACCTCCTATGCCGACCCTTCTTTTGGGGTCGGCCGACAACGTCATCGTCAGCACAGACGATCAGATGCGGCCTGTGCCGACCCTTCTTTTGGGGTTGGCCGACAAGTTGCGGGAGAGCCGGCGCCAGGCAGCCCCTATGCCGACCCCTCTTTTGGGGTTGGCCGACAACCTCGGGTTCACGACGCCCGCGCTTCGACGGCCCTATGCCGACCCTGGCTTTTAGGGTTGGCCGACAACGGCACCGTCTACCTCGCGCTATTCACCGCCCTATGCCGAACCCTTCTTTTGGGGTTGGCCGACAACGAGAAGACCACGAGCGCAACGGCGAACAGCCCTATGCCGACCCTTCTTTGGGGGTTGGCCGACAACAGCGCGGTGCGCTTGTCGGTCTCGTTCGAGCCTATGCCGACCCTTCTTTTGGGGTTGGCCGAAAACG

>NZ_AP022849|3|3|607215-607445|CRISPRCasFinder
CCTATGCCGACCCTTCTTTGGGGGCGGCCGACAACT	TGGAGAGCTCGTCGGTGATCCAGGAACCT
CCTATGCCGACCCTTCTTTTGGGGTCGGCCGACAAC	GTCATCGTCAGCACAGACGATCAGATGCGG
CCTGTGCCGACCCTTCTTTTGGGGTTGGCCGACAAG	TTGCGGGAGAGCCGGCGCCAGGCAGCC
CCTATGCCGACCCCTCTTTTGGGGTTGGCCGACAACCTCGGGTTCACGACGCCCGCGCTTCGACGGCCCTATGCCGACCCTGGCTTTTAGGGTTGGCCGACAACGGCACCGTCTACCTCGCGCTATTCACCGCCCTATGCCGAACCCTTCTTTTGGGGTTGGCCGACAAC	GAGAAGACCACGAGCGCAACGGCGAACAGC
CCTATGCCGACCCTTCTTTGGGGGTTGGCCGACAAC	AGCGCGGTGCGCTTGTCGGTCTCGTTCGAG


>NZ_AP022849|3|3|607215-607708|CRT
CCTATGCCGACCCTTCTTTGGGGGCGGCCGACAAC	TTGGAGAGCTCGTCGGTGATCCAGGAACCT
CCTATGCCGACCCTTCTTTTGGGGTCGGCCGACAA	CGTCATCGTCAGCACAGACGATCAGATGCGG
CCTGTGCCGACCCTTCTTTTGGGGTTGGCCGACAA	GTTGCGGGAGAGCCGGCGCCAGGCAGCC
CCTATGCCGACCCCTCTTTTGGGGTTGGCCGACAA	CCTCGGGTTCACGACGCCCGCGCTTCGACGGC
CCTATGCCGACCCTGGCTTTTAGGGTTGGCCGACA	ACGGCACCGTCTACCTCGCGCTATTCACCGC
CCTATGCCGAACCCTTCTTTTGGGGTTGGCCGACA	ACGAGAAGACCACGAGCGCAACGGCGAACAG
CCCTATGCCGACCCTTCTTTGGGGGTTGGCCGACA	ACAGCGCGGTGCGCTTGTCGGTCTCGTTCGA
GCCTATGCCGACCCTTCTTTTGGGGTTGGCCGAAA

>NZ_AP022849|3|3|607478-607646|PILER-CR
TATGCCGACCCTGGCTTTTAGGGTTGGCCGACAACGGCACCGTC	TACCTCGCGCTATTCACCGCCC
TATGCCGAACCCTTCTTTTGGGGTTGGCCGACAACGAGAAGACC	ACGAGCGCAACGGCGAACAGCCC
TATGCCGACCCTTCTTTGGGGGTTGGCCGACAACAG

>NZ_AP022849|3|4|607543-607711|CRISPRCasFinder
	TGGAGAGCTCGTCGGTGATCCAGGAACCT
CCTATGCCGACCCTTCTTTTGGGGTCGGCCGACAAC	GTCATCGTCAGCACAGACGATCAGATGCGG
CCTGTGCCGACCCTTCTTTTGGGGTTGGCCGACAAG	TTGCGGGAGAGCCGGCGCCAGGCAGCC
CCTATGCCGACCCCTCTTTTGGGGTTGGCCGACAACCTCGGGTTCACGACGCCCGCGCTTCGACGGCCCTATGCCGACCCTGGCTTTTAGGGTTGGCCGACAACGGCACCGTCTACCTCGCGCTATTCACCGCCCTATGCCGAACCCTTCTTTTGGGGTTGGCCGACAAC	GAGAAGACCACGAGCGCAACGGCGAACAGC
CCTATGCCGACCCTTCTTTGGGGGTTGGCCGACAAC	AGCGCGGTGCGCTTGTCGGTCTCGTTCGAG
CCTATGCCGACCCTTCTTTTGGGGTTGGCCGAAAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022849.1\|WP_173050977.1\|610580_611066_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050979.1\|611067_611562_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373919
NZ_AP022849.1\|WP_173050988.1\|614140_614848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050993.1\|616455_617286_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198393
NZ_AP022849.1\|WP_173050966.1\|601586_602231_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|215025
NZ_AP022849.1\|WP_173050969.1\|603026_604142_+\|hypothetical-protein	csf2gr7	cd09706_csf2gr7_CAS-IV-A	gnl\|CDD\|187837
NZ_AP022849.1\|WP_173050971.1\|604147_606361_+\|hypothetical-protein	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_AP022849.1\|WP_173050989.1\|614844_615225_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050962.1\|599648_600467_-\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|366523
NZ_AP022849.1\|WP_173050975.1\|609149_610568_+\|ATP-dependent-zinc-metalloprotease-FtsH	unknown	unknown	gnl\|CDD\|273520
NZ_AP022849.1\|WP_173050981.1\|611632_612586_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277358
NZ_AP022849.1\|WP_173050955.1\|594953_597026_+\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_AP022849.1\|WP_173050985.1\|613564_614140_+\|YqgE/AlgH-family-protein	unknown	unknown	gnl\|CDD\|234694
NZ_AP022849.1\|WP_173050964.1\|600705_601566_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050960.1\|599400_599652_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050991.1\|615555_616419_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050983.1\|612578_613412_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277367
NZ_AP022849.1\|WP_173050958.1\|599218_599392_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050967.1\|602227_603016_+\|hypothetical-protein	csf3gr5	mkCas0093_csf3gr5_CAS-IV-A	unknown
NZ_AP022849.1\|WP_173051188.1\|597765_598959_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP022849.1\|WP_173050983.1\|612578_613412_-\|metallophosphoesterase	gnl\|CDD\|277367	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	6.66255e-62
NZ_AP022849.1\|WP_173050985.1\|613564_614140_+\|YqgE/AlgH-family-protein	gnl\|CDD\|234694	PRK00228, PRK00228, YqgE/AlgH family protein.	3.39544e-39
NZ_AP022849.1\|WP_173050993.1\|616455_617286_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198393	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial hypothetical proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	8.40107e-37
NZ_AP022849.1\|WP_173050966.1\|601586_602231_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	5.13354e-12
NZ_AP022849.1\|WP_173050969.1\|603026_604142_+\|hypothetical-protein	gnl\|CDD\|187837	cd09706, Csf2_U, CRISPR/Cas system-associated RAMP superfamily protein Csf2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Contains several motifs similar to Cas7 family.	4.96932e-16
NZ_AP022849.1\|WP_173050971.1\|604147_606361_+\|hypothetical-protein	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	9.26184e-44
NZ_AP022849.1\|WP_173050979.1\|611067_611562_-\|hypothetical-protein	gnl\|CDD\|373919	pfam15523, Ntox16, Novel toxin 16. A predicted RNase toxin found in bacterial polymorphic toxin systems. The toxin possesses an all-alpha helical fold and conserved (DNE)xxH motif and arginine residue. In bacterial polymorphic toxin systems, the toxin is exported by the type 2, type 6, or Photorhabdus virulence cassette (PVC)-type secretion system.	4.46133e-19
NZ_AP022849.1\|WP_173050962.1\|599648_600467_-\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|366523	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease.	5.18102e-53
NZ_AP022849.1\|WP_173050955.1\|594953_597026_+\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	7.48236e-81
NZ_AP022849.1\|WP_173050981.1\|611632_612586_-\|metallophosphoesterase	gnl\|CDD\|277358	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.42465e-69
NZ_AP022849.1\|WP_173050975.1\|609149_610568_+\|ATP-dependent-zinc-metalloprotease-FtsH	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.63547e-167

>NZ_AP022849.1|WP_173050971.1|604147_606361_+|hypothetical-protein
MSIVHDLFSNPESEFFSIGLGGRLGKPRAAQAQFAEAVEGLLDQRSGIGIIQGETGSGKTAGYLVPALLKAAKTGALVVISTNTLNLQKQLMKDALPSALVLIERLTGKRLRAARRIGRQNFISLPGLQIKINDLAREATPNSALVKLLGRIHAELSIDPANATKQHVSEAFGQELGEIGVPAHFFDQLQIGRVDGDDYAYLKMLDDSVNCDVLVTNHALLTYNLMCSGGFLYDVKSDDRRPVIMIVDEADALASMAASLATRKLPLRDLDYAASRIDVAKATRTRLNKCLKNIAASFDQARDAGAILNRPSDIAIMPLSGQSNLQKVLLGEIEEVEGILTTCMSKDGLGTMRRYDLDTIVRDLQAIRANLARQGGASSEILSLYWSPIRNFPGFHIDGGDAGRIISRLWRLEHLRPATLLFTSATLTGAADRGIPMAGFAREIGMGQRVLAETVCAAFAPEQFGSMDFVLIDPRIAPPVTIRNDGDDDDTNTIANPAILPWWCGMIRAASDKGGRILVLLPSHRDASLVRDALGAIDGRRILLDSRDEGAQVLRAFETDASAILISAIRWEGLDMPGKIRHIVIPRYPLTPRDVVRDALREESLLARGYKKSSIRAQAFMASLSQARRKFFQGAGRGIRIESDSVTIWIGDSRWPLSDDRRERHPEVISRNWASSMVYAVPQRFRSNLDNAAIYSLASGVGPFESIEKERRQSRLSAFLDKIRPRREDVPDALPRL
>NZ_AP022849.1|WP_173050969.1|603026_604142_+|hypothetical-protein
MTKHFDVRFIGTMINRSPLHITPPNTQVKEVPNFSDAKAVEIATLPVYRDGVLRHLPVIPASTIRGKLRNAATRVAMRHLAEKPSREAYVYTSLGGVKGSEDENPFAIADRNQRRHVNPIIGLMGGSQPWDRSSAFISNAIPIDIVEPHFVTSARVDAMRLKSDLVDLLDQNAVPSYLKMREATRDKVEAAKKVTDAKKAFAIEKGSNGNADASALEAAKAEHEKAKGTAGNSLALPIAHRVMPAGVVMDQTITLQRVTAVEAGLFLAALNYLFDEDPFFGGKVSYHYGAVDADWKVSYREERGGKWIDAGSLAGTTFSPTTYDGAVLEEFASAWAEYAASGALDLTPPTHKSAGDDTSTSGTAKKGKKAA
>NZ_AP022849.1|WP_173050967.1|602227_603016_+|hypothetical-protein
MTAFILSLRTVTPVLLNRWLTLDAMLDGIQTQNGLAPEERILPLLAFDGRQKRAGLTALDASSGNLVFCASAAIPGDATIRIVDPVDETKSGRASIPHPAISSVTFRGGLRPNEAFKHDVEYPFATAAKVFDVKRGITAGFLSTQRMILPGRFEWLAQGDPDEVRRILAETPGIGAKVNNGFGQLDHASIRTTTVEDAPDLFGIVDEEGERLMRPAPADLLAGRSLNEFRHRIETCRPPYWDKRGQVHALVPKTIFDALLTR
>NZ_AP022849.1|WP_173050966.1|601586_602231_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MNAGLADAIAADWYKIHRLLHDQIGYRVLGMGEGQTSRWLFGADPRAVIHEPDAHARFIFVRTLPELSEAIAPLSVHSCDTFIPKLGDTVRFFLNVSTKRSASFDFRSFVLTQRPREGETREQAAWRVIASDFVANSGLELVGDLDAAHQRRFEVNKIDKRRSQKVTKHAIFASGCATVTDLEKVRRAILEGVGRDRGFGFGLLVLEPMAGGQA
>NZ_AP022849.1|WP_173050964.1|600705_601566_+|hypothetical-protein
MTGLLSRSYVSTNLPLSVVSVLLCPYDFFARNGGCALLSANGYSGDAPLQKLLASSWPTWPKPETAEQATPGAPEKIRTTRPGAAAVHCTILAWEGGLSIYSPACLQSVPGVTVERGLSVPRTYELAWNSLSLPRPLLFMTIGPSYQPALKAARLTLDPDLVEGVGQVSFLLDRERVELVTLCAAYMKTTPFKLRALKGSIEHAIALEGRSPKSTLQGKTINHPRHPLMVKQVRKALGLPAKANPNAFDAEFAQQHEFWENVSRLPMSDDPAWAIAEAIQNPKKAS
>NZ_AP022849.1|WP_173050962.1|599648_600467_-|DNA/RNA-non-specific-endonuclease
MRKTILASVFLIASMLTANAAPTQCPVFFAGGVAPDVGPSLSQKVRPLCFSAYALLHSGVTRSALWSAEHLTRDNVRSARSLERQNLFHAETALPVGERAELSDYVRSGFDRGHLAPSGNMPDEIAQAESFSLANMIPQNPDNNRNLWAAIETAVRDHAVRSGELYVVTGPLYIGKDLQALRNRVLVPTHVFKAVYDPRRQTAAAYITANGPGAEWKTVSIKELEALSGIDVFPALSSAAKTKLASLPSPAPRASRTAQQEGWVARTLRRLW
>NZ_AP022849.1|WP_173050960.1|599400_599652_-|hypothetical-protein
MKPFSDDASSVTLAGLTIENGTSEIAIYGDLRLRADRKGLEAATELARFFAEARDKLASQPNLPDAVDTVDASAVSTVRNPFG
>NZ_AP022849.1|WP_173050958.1|599218_599392_+|hypothetical-protein
MSSTRAFVDLVNELRREEGRFPVPQGSYPTNERFLEKLVREMREASARKSGGLKAAE
>NZ_AP022849.1|WP_173051188.1|597765_598959_+|hypothetical-protein
MALRPIAFSAGPNSVSEADIQALVHQFPGSLPINEIDPMFSGAVSVCTELNTPAGPIDNFLVTASGLPVLVECKLWRNPEARREITGQILDYAKELAKWSSADLHREVNRRLKRHDNALLEIVRRVNPAVDEMEFNDALTTNLRRGRFLLLIVGDGIREGVETIAEYLSAHAGLHFSLGLVEMPIFALPDGSRLAAPRVLARTTVITRHVIAAPADHIVVEASEPTERRTPATSTETIAAGEAYVRFWSEFLDGLTLDDPEQQKPKPFKLGYLSFSMPAPAGSSWLNVYRDMRRGVMGVFLASTRNTAGEYASNLIAEEWETVSKELGGSAIVESDDHGRPRIIDYKVFGSLDDAGTRTKAFEWLRERTNTFVNVLRPRVRSAVADYSASGAANVSG
>NZ_AP022849.1|WP_173050955.1|594953_597026_+|response-regulator
MTGSASVRFSPFRPRTMALLALAASVPLVLLASFAGVLILRQQQEEMQETAREATFNLADTLQREFDAQINVLKVMAASRAFDNGLDLYEFRDLAERSLTTQPNFTAITLNDLTGVRVARVPEDSHIGEQAKDILSHELTVATQQPSVGNVTQFPEEGPVFAVRVPIVRDSKIKGVISTTLKPSVLVALLQASRLSPEWISLVIDGNDRIVARAGDQGDFASQPGSLASEPARKARHTSDAGVYAGRTLDGRATNAHYRMLPGLRWSVHVAIPDKIYQEPVRRSIFLAVTAGIVALAISGVFVTLLLRELRRGQEVGRKVEDGLRLEALGRVTGGVAHDFNNLLMIMMGGADILKSRSGDSTRVQMIADTIASAAQRGRQLTTHLLAFARRSSHDPISFRIQDRIAHLAVMIERAINPDVRLQISIDPNTPAILADPNAFEVALINLAVNASDAMPDGGILTIRAHAWNTFRSPNSVSISVTDTGAGISQEFQEKIFEPFFTTKPTGKGTGLGLSQVHGFAYQSGGDIHVRSEMGQGSTFTLVMPRSNAPPVPSPLPIVSNDEVEGGRLLIIEDHVEVGSITGEVLRASGFKVKLVESAEEALDVIETDKAFDAVLSDIVLGDGMSGLDAAPRIQSALPNAAVVMMTGYSEALARGATCGFPLVRKPFDQAEVVRVIQSAIAQGPNREAA
>NZ_AP022849.1|WP_173050975.1|609149_610568_+|ATP-dependent-zinc-metalloprotease-FtsH
MAGLVVWLLRTARSKMAIADFVKPRDIKDRILFQHVAGADDGKEALKDIVDYLRDPSRFEAVGAKPRNGVLLVGDPGNGKTLLAKAVAGEAGVPFMACSGSQFQEMFAGVGAARVRSMFKKLRKAAPAILFIDEIDSLGKKRSSSSSSVENDSANTLNELLTQLDGLTSGSGIVIIGATNRVEVLDPALIRAGRFDMHVIVPSPDQKARTEILKVASRDVELADDVDFATIARGTSGFSGADLAILVNEAAILAGKRSAHQVTMADFDQARDNKILGGTRGTLMIDPAELETIIVHESGHALANVLLPACDPIHKGTVTPRGRSLGHIATMPLKDRVLVTRTKFLSELVMLLAGRAAEEIFFGADMVTSGATSDSDLATTTAFDMVARYGMGSSMASRVGSSRPLSEETKRRVDEEVEEIIRASYERAKELLLANKPALDRLCARFREEDTLDGDEIRRIVAESSPAVSAAA
>NZ_AP022849.1|WP_173050977.1|610580_611066_-|hypothetical-protein
MKSLIDIVSDAFPPELSYGAVPIEELYEFYSMESLGRPVANWTEITEEDLRHGHFGALLQMMLDGTFVNWLPAWLVMVPACGGEVRKALAAFSGCLSPRASAELGEADRLAERVSWLNSAQRKAVAAAGRELAGKHIEFFGFDAGSDIAEAWERYASEAPA
>NZ_AP022849.1|WP_173050979.1|611067_611562_-|hypothetical-protein
MKILMLSAALLLAAVAAQAQTALMPSPGAIKMGVGVGGGILAYKAAKACLDHKISCAVAIGGGAALVHKFKKDAGLPPPGDCGPEQFRRLNAEVERACKSPTPLRCLRTDSAAILENKADKFRFCAVARSRRETLCFRGGDKNHKTQINQVNNAYRNCVELAGI
>NZ_AP022849.1|WP_173050981.1|611632_612586_-|metallophosphoesterase
MADRLFIGDIHGHADELEALLAENGFQHAGGAWRHPSMIAVFCGDYIDRGPRQLDVVDIVRRMVDAGSAAAIQGNHEFNAVAWATEIPDEPGRHFRVRGTKNRAQHAAFLDAVGNDSEQHKEIVSWFRSLPLWVEFDGAVAIHACWHRDLQAELSGLTDANHVLTEEGWFQALTKGARAYEITETLLKGPEVALPPGVTFFDKDGHERKNTRVRWWDNEATTFRSAAIVDEETAAFLPDEALGSDWLADLGEERLVFFGHYWMAGEPRILHPRRTCLDFSVAKAGHLAAYRHEGETELDPEHLVWAGKPVPGLRPAG
>NZ_AP022849.1|WP_173050983.1|612578_613412_-|metallophosphoesterase
MLKRLPKPAVKRLPLNTKGKDLIVGDIHGMFDLVLRAMEKMNFDQSRDRLISVGDLIDRGPGSHRTAKFLSCSFVEAVLGNHEGMLLEAYQGGDAHPAVLEFLHSRNGFEWWRDTPDELRSDILDALWKLPLALEIETDRGLVGVVHADVPRGMSWQAFTGALEAGDADVAECALWGRDRIHKLDESGVQGIGRIYVGHTPLRRVAKLGNVVALDTGGVFGLGREEGALTALDIATGTMEIRTVHSMMRPDDLVFSGPVGDAPDTAFSFESVGMRHG
>NZ_AP022849.1|WP_173050985.1|613564_614140_+|YqgE/AlgH-family-protein
MITNLAGHLLVSPPGGTSRNIVYVCEHADADHTAFGLRLGNPVPELDFSQVLLQQEIITPEESLILPDETKRIPVLHGGDNDGRRGFILHSSDVFLPDQTQKISEMISLTRTPDLLRAIGRRSGPRRVLFAIGSRAWSPGAVTKEIFEGDWLVCPGEPEIVFGANPEEQYAMALAQLGLNAATRISAPGFA
>NZ_AP022849.1|WP_173050988.1|614140_614848_+|hypothetical-protein
MPIIARNHRQDAWQPLKDWPSDTYVQWGGRGVVLRADDKGGSYSTAFFEAMPAGGGFIRGEGKSIEEAEADAFSRFEKEAACRPHRWGRRGYTNGGAKCLRCGSFRTAFKSIYEIGAWRAPLSATELSLLQMGGTRQRADDAPDVNRRRRHLYLRARLAGLTIPDAGDETDEDDFEQICRVAVARWFASRLPEMTSPEERPKSSLMGEVFDRMHLRSLMRDAIELGFLPPEMAPA
>NZ_AP022849.1|WP_173050989.1|614844_615225_-|hypothetical-protein
MSAPRIVYFAHMQFMGQTEGGILVDDRFFAMPGGPGSQALQAELNKRGTLPLRQPLPAQAYPQFKLRSELGAIENAWARLGSLSEADIANAVRGDKTAWARAYDRNRVVAISDRAIFEEFLWLHDA
>NZ_AP022849.1|WP_173050991.1|615555_616419_+|hypothetical-protein
MSAQDAPVAFRVKDQWARPVDQTYRWRDSKLWAKALLREKPVTLEVFVASLDGTSHELNPTSRHSDRILERELDIQEVHHTDREEVERKVRSAASEMMFVDGVQWDVVEEPFLAADMERDYPSVRVIEGSDRRPAFQSFRLDELDLIKELHAERIGRAKGFREPDLIEILIPEAVQHRFEPELLLATAREVSRTMADRLALLDAPYFVAFAGLRDETYALEHKLRTDPFASLGELSLKLREALQQITTDRTKHDLGGAWFEEEKLRALARVDRYVGEIELGTLDMKP
>NZ_AP022849.1|WP_173050993.1|616455_617286_+|GIY-YIG-nuclease-family-protein
MPFRFNMLLQDAGIEPSSVRLLRHQDNRSIKGRSPYELWRDNRPAFDEYQRVQTFSNRAKLQAPYWASFVVTSTGETLFAGLYRCQYSGINEADISWPHAPGTDAAGTRDVYALELDPRFEDLQGRLVIEWGLGGRAWIQRADFQEKAVAEIWRSFREPEFPGFTEFMADLSSIERLPATWSTALSAVKGVYLLTCPRTKEQYVGSATGADGFFGRWLTYRDGHGGNVGLKSRDPSDYRVSILEVAGDGSLPEDILAKESLWKRKLQSGAMGLNRN

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Crispr_ID: NZ_AP022849_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022849_4

607806-607906

TypeIV-A

Consensus_repeat	Method
CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	CRISPRCasFinder

1 spacers

DinG,csf2gr7,csf3gr5,cas6e

The CRISPR arrays of NZ_AP022849_4

>merge|NZ_AP022849|4|607806-607906|CRISPRCasFinder
TACATGCCGACCATCCATTTGGGGTTGGCCGACAACACGACAGCAGAGCCGGAAGCGATGCGCGCCCTATGCCGACCCATCAAATGGGGTTGGCCGACAAC

>NZ_AP022849|4|5|607806-607906|CRISPRCasFinder
TACATGCCGACCATCCATTTGGGGTTGGCCGACAAC	ACGACAGCAGAGCCGGAAGCGATGCGCGC
CCTATGCCGACCCATCAAATGGGGTTGGCCGACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022849.1\|WP_173050977.1\|610580_611066_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050979.1\|611067_611562_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373919
NZ_AP022849.1\|WP_173050988.1\|614140_614848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050993.1\|616455_617286_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198393
NZ_AP022849.1\|WP_173050966.1\|601586_602231_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|215025
NZ_AP022849.1\|WP_173050973.1\|607500_607731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050969.1\|603026_604142_+\|hypothetical-protein	csf2gr7	cd09706_csf2gr7_CAS-IV-A	gnl\|CDD\|187837
NZ_AP022849.1\|WP_173050971.1\|604147_606361_+\|hypothetical-protein	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_AP022849.1\|WP_173050989.1\|614844_615225_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050962.1\|599648_600467_-\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|366523
NZ_AP022849.1\|WP_173050975.1\|609149_610568_+\|ATP-dependent-zinc-metalloprotease-FtsH	unknown	unknown	gnl\|CDD\|273520
NZ_AP022849.1\|WP_173050981.1\|611632_612586_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277358
NZ_AP022849.1\|WP_173050964.1\|600705_601566_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050985.1\|613564_614140_+\|YqgE/AlgH-family-protein	unknown	unknown	gnl\|CDD\|234694
NZ_AP022849.1\|WP_173050960.1\|599400_599652_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050991.1\|615555_616419_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050983.1\|612578_613412_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277367
NZ_AP022849.1\|WP_173050958.1\|599218_599392_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022849.1\|WP_173050967.1\|602227_603016_+\|hypothetical-protein	csf3gr5	mkCas0093_csf3gr5_CAS-IV-A	unknown
NZ_AP022849.1\|WP_173051188.1\|597765_598959_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP022849.1\|WP_173050983.1\|612578_613412_-\|metallophosphoesterase	gnl\|CDD\|277367	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	6.66255e-62
NZ_AP022849.1\|WP_173050985.1\|613564_614140_+\|YqgE/AlgH-family-protein	gnl\|CDD\|234694	PRK00228, PRK00228, YqgE/AlgH family protein.	3.39544e-39
NZ_AP022849.1\|WP_173050966.1\|601586_602231_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	5.13354e-12
NZ_AP022849.1\|WP_173050969.1\|603026_604142_+\|hypothetical-protein	gnl\|CDD\|187837	cd09706, Csf2_U, CRISPR/Cas system-associated RAMP superfamily protein Csf2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Contains several motifs similar to Cas7 family.	4.96932e-16
NZ_AP022849.1\|WP_173050971.1\|604147_606361_+\|hypothetical-protein	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	9.26184e-44
NZ_AP022849.1\|WP_173050979.1\|611067_611562_-\|hypothetical-protein	gnl\|CDD\|373919	pfam15523, Ntox16, Novel toxin 16. A predicted RNase toxin found in bacterial polymorphic toxin systems. The toxin possesses an all-alpha helical fold and conserved (DNE)xxH motif and arginine residue. In bacterial polymorphic toxin systems, the toxin is exported by the type 2, type 6, or Photorhabdus virulence cassette (PVC)-type secretion system.	4.46133e-19
NZ_AP022849.1\|WP_173050962.1\|599648_600467_-\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|366523	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease.	5.18102e-53
NZ_AP022849.1\|WP_173050975.1\|609149_610568_+\|ATP-dependent-zinc-metalloprotease-FtsH	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.63547e-167
NZ_AP022849.1\|WP_173050981.1\|611632_612586_-\|metallophosphoesterase	gnl\|CDD\|277358	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.42465e-69
NZ_AP022849.1\|WP_173050993.1\|616455_617286_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198393	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial hypothetical proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	8.40107e-37

>NZ_AP022849.1|WP_173050973.1|607500_607731_+|hypothetical-protein
MADNGTVYLALFTALCRTLLLGLADNEKTTSATANSPMPTLLWGLADNSAVRLSVSFEPMPTLLLGLAENAMQSIA
>NZ_AP022849.1|WP_173050971.1|604147_606361_+|hypothetical-protein
MSIVHDLFSNPESEFFSIGLGGRLGKPRAAQAQFAEAVEGLLDQRSGIGIIQGETGSGKTAGYLVPALLKAAKTGALVVISTNTLNLQKQLMKDALPSALVLIERLTGKRLRAARRIGRQNFISLPGLQIKINDLAREATPNSALVKLLGRIHAELSIDPANATKQHVSEAFGQELGEIGVPAHFFDQLQIGRVDGDDYAYLKMLDDSVNCDVLVTNHALLTYNLMCSGGFLYDVKSDDRRPVIMIVDEADALASMAASLATRKLPLRDLDYAASRIDVAKATRTRLNKCLKNIAASFDQARDAGAILNRPSDIAIMPLSGQSNLQKVLLGEIEEVEGILTTCMSKDGLGTMRRYDLDTIVRDLQAIRANLARQGGASSEILSLYWSPIRNFPGFHIDGGDAGRIISRLWRLEHLRPATLLFTSATLTGAADRGIPMAGFAREIGMGQRVLAETVCAAFAPEQFGSMDFVLIDPRIAPPVTIRNDGDDDDTNTIANPAILPWWCGMIRAASDKGGRILVLLPSHRDASLVRDALGAIDGRRILLDSRDEGAQVLRAFETDASAILISAIRWEGLDMPGKIRHIVIPRYPLTPRDVVRDALREESLLARGYKKSSIRAQAFMASLSQARRKFFQGAGRGIRIESDSVTIWIGDSRWPLSDDRRERHPEVISRNWASSMVYAVPQRFRSNLDNAAIYSLASGVGPFESIEKERRQSRLSAFLDKIRPRREDVPDALPRL
>NZ_AP022849.1|WP_173050969.1|603026_604142_+|hypothetical-protein
MTKHFDVRFIGTMINRSPLHITPPNTQVKEVPNFSDAKAVEIATLPVYRDGVLRHLPVIPASTIRGKLRNAATRVAMRHLAEKPSREAYVYTSLGGVKGSEDENPFAIADRNQRRHVNPIIGLMGGSQPWDRSSAFISNAIPIDIVEPHFVTSARVDAMRLKSDLVDLLDQNAVPSYLKMREATRDKVEAAKKVTDAKKAFAIEKGSNGNADASALEAAKAEHEKAKGTAGNSLALPIAHRVMPAGVVMDQTITLQRVTAVEAGLFLAALNYLFDEDPFFGGKVSYHYGAVDADWKVSYREERGGKWIDAGSLAGTTFSPTTYDGAVLEEFASAWAEYAASGALDLTPPTHKSAGDDTSTSGTAKKGKKAA
>NZ_AP022849.1|WP_173050967.1|602227_603016_+|hypothetical-protein
MTAFILSLRTVTPVLLNRWLTLDAMLDGIQTQNGLAPEERILPLLAFDGRQKRAGLTALDASSGNLVFCASAAIPGDATIRIVDPVDETKSGRASIPHPAISSVTFRGGLRPNEAFKHDVEYPFATAAKVFDVKRGITAGFLSTQRMILPGRFEWLAQGDPDEVRRILAETPGIGAKVNNGFGQLDHASIRTTTVEDAPDLFGIVDEEGERLMRPAPADLLAGRSLNEFRHRIETCRPPYWDKRGQVHALVPKTIFDALLTR
>NZ_AP022849.1|WP_173050966.1|601586_602231_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MNAGLADAIAADWYKIHRLLHDQIGYRVLGMGEGQTSRWLFGADPRAVIHEPDAHARFIFVRTLPELSEAIAPLSVHSCDTFIPKLGDTVRFFLNVSTKRSASFDFRSFVLTQRPREGETREQAAWRVIASDFVANSGLELVGDLDAAHQRRFEVNKIDKRRSQKVTKHAIFASGCATVTDLEKVRRAILEGVGRDRGFGFGLLVLEPMAGGQA
>NZ_AP022849.1|WP_173050964.1|600705_601566_+|hypothetical-protein
MTGLLSRSYVSTNLPLSVVSVLLCPYDFFARNGGCALLSANGYSGDAPLQKLLASSWPTWPKPETAEQATPGAPEKIRTTRPGAAAVHCTILAWEGGLSIYSPACLQSVPGVTVERGLSVPRTYELAWNSLSLPRPLLFMTIGPSYQPALKAARLTLDPDLVEGVGQVSFLLDRERVELVTLCAAYMKTTPFKLRALKGSIEHAIALEGRSPKSTLQGKTINHPRHPLMVKQVRKALGLPAKANPNAFDAEFAQQHEFWENVSRLPMSDDPAWAIAEAIQNPKKAS
>NZ_AP022849.1|WP_173050962.1|599648_600467_-|DNA/RNA-non-specific-endonuclease
MRKTILASVFLIASMLTANAAPTQCPVFFAGGVAPDVGPSLSQKVRPLCFSAYALLHSGVTRSALWSAEHLTRDNVRSARSLERQNLFHAETALPVGERAELSDYVRSGFDRGHLAPSGNMPDEIAQAESFSLANMIPQNPDNNRNLWAAIETAVRDHAVRSGELYVVTGPLYIGKDLQALRNRVLVPTHVFKAVYDPRRQTAAAYITANGPGAEWKTVSIKELEALSGIDVFPALSSAAKTKLASLPSPAPRASRTAQQEGWVARTLRRLW
>NZ_AP022849.1|WP_173050960.1|599400_599652_-|hypothetical-protein
MKPFSDDASSVTLAGLTIENGTSEIAIYGDLRLRADRKGLEAATELARFFAEARDKLASQPNLPDAVDTVDASAVSTVRNPFG
>NZ_AP022849.1|WP_173050958.1|599218_599392_+|hypothetical-protein
MSSTRAFVDLVNELRREEGRFPVPQGSYPTNERFLEKLVREMREASARKSGGLKAAE
>NZ_AP022849.1|WP_173051188.1|597765_598959_+|hypothetical-protein
MALRPIAFSAGPNSVSEADIQALVHQFPGSLPINEIDPMFSGAVSVCTELNTPAGPIDNFLVTASGLPVLVECKLWRNPEARREITGQILDYAKELAKWSSADLHREVNRRLKRHDNALLEIVRRVNPAVDEMEFNDALTTNLRRGRFLLLIVGDGIREGVETIAEYLSAHAGLHFSLGLVEMPIFALPDGSRLAAPRVLARTTVITRHVIAAPADHIVVEASEPTERRTPATSTETIAAGEAYVRFWSEFLDGLTLDDPEQQKPKPFKLGYLSFSMPAPAGSSWLNVYRDMRRGVMGVFLASTRNTAGEYASNLIAEEWETVSKELGGSAIVESDDHGRPRIIDYKVFGSLDDAGTRTKAFEWLRERTNTFVNVLRPRVRSAVADYSASGAANVSG
>NZ_AP022849.1|WP_173050975.1|609149_610568_+|ATP-dependent-zinc-metalloprotease-FtsH
MAGLVVWLLRTARSKMAIADFVKPRDIKDRILFQHVAGADDGKEALKDIVDYLRDPSRFEAVGAKPRNGVLLVGDPGNGKTLLAKAVAGEAGVPFMACSGSQFQEMFAGVGAARVRSMFKKLRKAAPAILFIDEIDSLGKKRSSSSSSVENDSANTLNELLTQLDGLTSGSGIVIIGATNRVEVLDPALIRAGRFDMHVIVPSPDQKARTEILKVASRDVELADDVDFATIARGTSGFSGADLAILVNEAAILAGKRSAHQVTMADFDQARDNKILGGTRGTLMIDPAELETIIVHESGHALANVLLPACDPIHKGTVTPRGRSLGHIATMPLKDRVLVTRTKFLSELVMLLAGRAAEEIFFGADMVTSGATSDSDLATTTAFDMVARYGMGSSMASRVGSSRPLSEETKRRVDEEVEEIIRASYERAKELLLANKPALDRLCARFREEDTLDGDEIRRIVAESSPAVSAAA
>NZ_AP022849.1|WP_173050977.1|610580_611066_-|hypothetical-protein
MKSLIDIVSDAFPPELSYGAVPIEELYEFYSMESLGRPVANWTEITEEDLRHGHFGALLQMMLDGTFVNWLPAWLVMVPACGGEVRKALAAFSGCLSPRASAELGEADRLAERVSWLNSAQRKAVAAAGRELAGKHIEFFGFDAGSDIAEAWERYASEAPA
>NZ_AP022849.1|WP_173050979.1|611067_611562_-|hypothetical-protein
MKILMLSAALLLAAVAAQAQTALMPSPGAIKMGVGVGGGILAYKAAKACLDHKISCAVAIGGGAALVHKFKKDAGLPPPGDCGPEQFRRLNAEVERACKSPTPLRCLRTDSAAILENKADKFRFCAVARSRRETLCFRGGDKNHKTQINQVNNAYRNCVELAGI
>NZ_AP022849.1|WP_173050981.1|611632_612586_-|metallophosphoesterase
MADRLFIGDIHGHADELEALLAENGFQHAGGAWRHPSMIAVFCGDYIDRGPRQLDVVDIVRRMVDAGSAAAIQGNHEFNAVAWATEIPDEPGRHFRVRGTKNRAQHAAFLDAVGNDSEQHKEIVSWFRSLPLWVEFDGAVAIHACWHRDLQAELSGLTDANHVLTEEGWFQALTKGARAYEITETLLKGPEVALPPGVTFFDKDGHERKNTRVRWWDNEATTFRSAAIVDEETAAFLPDEALGSDWLADLGEERLVFFGHYWMAGEPRILHPRRTCLDFSVAKAGHLAAYRHEGETELDPEHLVWAGKPVPGLRPAG
>NZ_AP022849.1|WP_173050983.1|612578_613412_-|metallophosphoesterase
MLKRLPKPAVKRLPLNTKGKDLIVGDIHGMFDLVLRAMEKMNFDQSRDRLISVGDLIDRGPGSHRTAKFLSCSFVEAVLGNHEGMLLEAYQGGDAHPAVLEFLHSRNGFEWWRDTPDELRSDILDALWKLPLALEIETDRGLVGVVHADVPRGMSWQAFTGALEAGDADVAECALWGRDRIHKLDESGVQGIGRIYVGHTPLRRVAKLGNVVALDTGGVFGLGREEGALTALDIATGTMEIRTVHSMMRPDDLVFSGPVGDAPDTAFSFESVGMRHG
>NZ_AP022849.1|WP_173050985.1|613564_614140_+|YqgE/AlgH-family-protein
MITNLAGHLLVSPPGGTSRNIVYVCEHADADHTAFGLRLGNPVPELDFSQVLLQQEIITPEESLILPDETKRIPVLHGGDNDGRRGFILHSSDVFLPDQTQKISEMISLTRTPDLLRAIGRRSGPRRVLFAIGSRAWSPGAVTKEIFEGDWLVCPGEPEIVFGANPEEQYAMALAQLGLNAATRISAPGFA
>NZ_AP022849.1|WP_173050988.1|614140_614848_+|hypothetical-protein
MPIIARNHRQDAWQPLKDWPSDTYVQWGGRGVVLRADDKGGSYSTAFFEAMPAGGGFIRGEGKSIEEAEADAFSRFEKEAACRPHRWGRRGYTNGGAKCLRCGSFRTAFKSIYEIGAWRAPLSATELSLLQMGGTRQRADDAPDVNRRRRHLYLRARLAGLTIPDAGDETDEDDFEQICRVAVARWFASRLPEMTSPEERPKSSLMGEVFDRMHLRSLMRDAIELGFLPPEMAPA
>NZ_AP022849.1|WP_173050989.1|614844_615225_-|hypothetical-protein
MSAPRIVYFAHMQFMGQTEGGILVDDRFFAMPGGPGSQALQAELNKRGTLPLRQPLPAQAYPQFKLRSELGAIENAWARLGSLSEADIANAVRGDKTAWARAYDRNRVVAISDRAIFEEFLWLHDA
>NZ_AP022849.1|WP_173050991.1|615555_616419_+|hypothetical-protein
MSAQDAPVAFRVKDQWARPVDQTYRWRDSKLWAKALLREKPVTLEVFVASLDGTSHELNPTSRHSDRILERELDIQEVHHTDREEVERKVRSAASEMMFVDGVQWDVVEEPFLAADMERDYPSVRVIEGSDRRPAFQSFRLDELDLIKELHAERIGRAKGFREPDLIEILIPEAVQHRFEPELLLATAREVSRTMADRLALLDAPYFVAFAGLRDETYALEHKLRTDPFASLGELSLKLREALQQITTDRTKHDLGGAWFEEEKLRALARVDRYVGEIELGTLDMKP
>NZ_AP022849.1|WP_173050993.1|616455_617286_+|GIY-YIG-nuclease-family-protein
MPFRFNMLLQDAGIEPSSVRLLRHQDNRSIKGRSPYELWRDNRPAFDEYQRVQTFSNRAKLQAPYWASFVVTSTGETLFAGLYRCQYSGINEADISWPHAPGTDAAGTRDVYALELDPRFEDLQGRLVIEWGLGGRAWIQRADFQEKAVAEIWRSFREPEFPGFTEFMADLSSIERLPATWSTALSAVKGVYLLTCPRTKEQYVGSATGADGFFGRWLTYRDGHGGNVGLKSRDPSDYRVSILEVAGDGSLPEDILAKESLWKRKLQSGAMGLNRN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP022849_1	1.1\|496180\|28\|NZ_AP022849\|CRISPRCasFinder	496180-496207	28	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496180-496207	0	1.0
NZ_AP022849_1	1.2\|496246\|28\|NZ_AP022849\|CRISPRCasFinder	496246-496273	28	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496246-496273	0	1.0
NZ_AP022849_1	1.3\|496312\|28\|NZ_AP022849\|CRISPRCasFinder	496312-496339	28	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496312-496339	0	1.0
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496378-496405	0	1.0
NZ_AP022849_1	1.5\|496444\|28\|NZ_AP022849\|CRISPRCasFinder	496444-496471	28	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496444-496471	0	1.0
NZ_AP022849_1	1.6\|496510\|28\|NZ_AP022849\|CRISPRCasFinder	496510-496537	28	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496510-496537	0	1.0
NZ_AP022849_1	1.7\|496179\|30\|NZ_AP022849\|PILER-CR,CRT	496179-496208	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496179-496208	0	1.0
NZ_AP022849_1	1.8\|496245\|30\|NZ_AP022849\|PILER-CR,CRT	496245-496274	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496245-496274	0	1.0
NZ_AP022849_1	1.9\|496311\|30\|NZ_AP022849\|PILER-CR,CRT	496311-496340	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496311-496340	0	1.0
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496377-496406	0	1.0
NZ_AP022849_1	1.11\|496443\|30\|NZ_AP022849\|PILER-CR,CRT	496443-496472	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496443-496472	0	1.0
NZ_AP022849_1	1.12\|496509\|30\|NZ_AP022849\|PILER-CR,CRT	496509-496538	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	496509-496538	0	1.0
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	606408-606437	0	1.0
NZ_AP022849_2	2.2\|606474\|29\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606474-606502	29	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	606474-606502	0	1.0
NZ_AP022849_2	2.3\|606539\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606539-606568	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	606539-606568	0	1.0
NZ_AP022849_2	2.4\|606605\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606605-606634	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	606605-606634	0	1.0
NZ_AP022849_2	2.5\|606671\|30\|NZ_AP022849\|CRISPRCasFinder,CRT	606671-606700	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	606671-606700	0	1.0
NZ_AP022849_2	2.6\|606737\|30\|NZ_AP022849\|CRT	606737-606766	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	606737-606766	0	1.0
NZ_AP022849_2	2.7\|606803\|31\|NZ_AP022849\|CRT	606803-606833	31	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	606803-606833	0	1.0
NZ_AP022849_3	3.1\|607251\|29\|NZ_AP022849\|CRISPRCasFinder	607251-607279	29	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607251-607279	0	1.0
NZ_AP022849_3	3.2\|607316\|30\|NZ_AP022849\|CRISPRCasFinder	607316-607345	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607316-607345	0	1.0
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607382-607408	0	1.0
NZ_AP022849_3	3.4\|607250\|30\|NZ_AP022849\|CRT	607250-607279	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607250-607279	0	1.0
NZ_AP022849_3	3.5\|607315\|31\|NZ_AP022849\|CRT	607315-607345	31	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607315-607345	0	1.0
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607381-607408	0	1.0
NZ_AP022849_3	3.7\|607444\|32\|NZ_AP022849\|CRT	607444-607475	32	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607444-607475	0	1.0
NZ_AP022849_3	3.8\|607511\|31\|NZ_AP022849\|CRT	607511-607541	31	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607511-607541	0	1.0
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607577-607607	0	1.0
NZ_AP022849_3	3.10\|607643\|31\|NZ_AP022849\|CRT	607643-607673	31	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607643-607673	0	1.0
NZ_AP022849_3	3.11\|607522\|22\|NZ_AP022849\|PILER-CR	607522-607543	22	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607515-607536	0	1.0
NZ_AP022849_3	3.12\|607588\|23\|NZ_AP022849\|PILER-CR	607588-607610	23	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607581-607603	0	1.0
NZ_AP022849_3	3.13\|607579\|30\|NZ_AP022849\|CRISPRCasFinder	607579-607608	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607579-607608	0	1.0
NZ_AP022849_3	3.14\|607645\|30\|NZ_AP022849\|CRISPRCasFinder	607645-607674	30	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607645-607674	0	1.0
NZ_AP022849_4	4.1\|607842\|29\|NZ_AP022849\|CRISPRCasFinder	607842-607870	29	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	607842-607870	0	1.0
NZ_AP022849_3	3.12\|607588\|23\|NZ_AP022849\|PILER-CR	607588-607610	23	NZ_CP007515	Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence	87747-87769	2	0.913
NZ_AP022849_3	3.12\|607588\|23\|NZ_AP022849\|PILER-CR	607588-607610	23	NZ_CP021032	Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence	324837-324859	2	0.913
NZ_AP022849_3	3.12\|607588\|23\|NZ_AP022849\|PILER-CR	607588-607610	23	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	655819-655841	2	0.913
NZ_AP022849_1	1.2\|496246\|28\|NZ_AP022849\|CRISPRCasFinder	496246-496273	28	NZ_CP011297	Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence	122426-122453	4	0.857
NZ_AP022849_2	2.4\|606605\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606605-606634	30	NC_019519	Agrobacterium phage 7-7-1, complete genome	5363-5392	4	0.867
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NZ_AP014814	Methylorubrum populi strain P-1M plasmid pMPPM05, complete sequence	12385-12411	4	0.852
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NC_010727	Methylorubrum populi BJ001 plasmid pMPOP01, complete sequence	12398-12424	4	0.852
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NZ_CP006994	Methylobacterium sp. AMS5 plasmid pAMS5b, complete sequence	24871-24897	4	0.852
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	KC292022	Halovirus HRTV-5, complete genome	1890-1920	4	0.871
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	MN901521	Halorubrum coriense virus Serpecor1, complete genome	1922-1952	4	0.871
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	MN901520	Halorubrum coriense virus Hardycor2, complete genome	1926-1956	4	0.871
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	NC_021321	Halovirus HRTV-8, complete genome	1954-1984	4	0.871
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	AY190604	Halovirus HF1, complete genome	73943-73973	4	0.871
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	NC_003345	Halorubrum phage HF2, complete genome	75715-75745	4	0.871
NZ_AP022849_1	1.2\|496246\|28\|NZ_AP022849\|CRISPRCasFinder	496246-496273	28	NZ_CP017300	Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence	381664-381691	5	0.821
NZ_AP022849_1	1.2\|496246\|28\|NZ_AP022849\|CRISPRCasFinder	496246-496273	28	NZ_CP015205	Rhodococcus sp. 008 plasmid pR8C2, complete sequence	14614-14641	5	0.821
NZ_AP022849_1	1.2\|496246\|28\|NZ_AP022849\|CRISPRCasFinder	496246-496273	28	NZ_CP025960	Rhodococcus qingshengii strain djl-6-2 plasmid pDJL1, complete sequence	57954-57981	5	0.821
NZ_AP022849_1	1.2\|496246\|28\|NZ_AP022849\|CRISPRCasFinder	496246-496273	28	NZ_CP016454	Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence	195-222	5	0.821
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NZ_CP025584	Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-01, complete sequence	57847-57874	5	0.821
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NZ_CP030129	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence	144849-144876	5	0.821
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	471059-471086	5	0.821
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NZ_CP011296	Rhodococcus erythropolis strain BG43 plasmid pRLCBG43, complete sequence	90915-90942	5	0.821
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	373422-373449	5	0.821
NZ_AP022849_1	1.6\|496510\|28\|NZ_AP022849\|CRISPRCasFinder	496510-496537	28	LC201957	Kocuria palustris plasmid pKPAL2 DNA, complete sequence	811-838	5	0.821
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	252468-252494	5	0.815
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	228886-228912	5	0.815
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	228886-228912	5	0.815
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	12165-12191	5	0.815
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NZ_AP014814	Methylorubrum populi strain P-1M plasmid pMPPM05, complete sequence	12384-12411	5	0.821
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NC_010727	Methylorubrum populi BJ001 plasmid pMPOP01, complete sequence	12397-12424	5	0.821
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NZ_CP006994	Methylobacterium sp. AMS5 plasmid pAMS5b, complete sequence	24870-24897	5	0.821
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NZ_CP042999	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence	7635-7662	6	0.786
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	484891-484918	6	0.786
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	194510-194537	6	0.786
NZ_AP022849_1	1.6\|496510\|28\|NZ_AP022849\|CRISPRCasFinder	496510-496537	28	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	86901-86928	6	0.786
NZ_AP022849_1	1.6\|496510\|28\|NZ_AP022849\|CRISPRCasFinder	496510-496537	28	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	137094-137121	6	0.786
NZ_AP022849_1	1.6\|496510\|28\|NZ_AP022849\|CRISPRCasFinder	496510-496537	28	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	157401-157428	6	0.786
NZ_AP022849_1	1.6\|496510\|28\|NZ_AP022849\|CRISPRCasFinder	496510-496537	28	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	201445-201472	6	0.786
NZ_AP022849_1	1.8\|496245\|30\|NZ_AP022849\|PILER-CR,CRT	496245-496274	30	NZ_CP011297	Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence	122425-122454	6	0.8
NZ_AP022849_1	1.8\|496245\|30\|NZ_AP022849\|PILER-CR,CRT	496245-496274	30	NC_000914	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence	398109-398138	6	0.8
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_CP025584	Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-01, complete sequence	57846-57875	6	0.8
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	471058-471087	6	0.8
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	298670-298699	6	0.8
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NC_048780	Corynebacterium phage StAB, complete genome	22373-22402	6	0.8
NZ_AP022849_1	1.12\|496509\|30\|NZ_AP022849\|PILER-CR,CRT	496509-496538	30	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1601806-1601835	6	0.8
NZ_AP022849_2	2.3\|606539\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606539-606568	30	NC_016972	Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2, complete sequence	54279-54308	6	0.8
NZ_AP022849_2	2.3\|606539\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606539-606568	30	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1023392-1023421	6	0.8
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	468411-468437	6	0.778
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	35134-35160	6	0.778
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	MK814751	Mycobacterium phage Bananafish, complete genome	21947-21973	6	0.778
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	KX443696	Mycobacterium phage Laurie, complete genome	21946-21972	6	0.778
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	252467-252494	6	0.786
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	228885-228912	6	0.786
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	228885-228912	6	0.786
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	12165-12192	6	0.786
NZ_AP022849_3	3.13\|607579\|30\|NZ_AP022849\|CRISPRCasFinder	607579-607608	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	655817-655846	6	0.8
NZ_AP022849_4	4.1\|607842\|29\|NZ_AP022849\|CRISPRCasFinder	607842-607870	29	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1760284-1760312	6	0.793
NZ_AP022849_4	4.1\|607842\|29\|NZ_AP022849\|CRISPRCasFinder	607842-607870	29	NZ_CP022370	Bosea sp. AS-1 plasmid unnamed1, complete sequence	170076-170104	6	0.793
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	571916-571943	7	0.75
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	2881-2908	7	0.75
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	2881-2908	7	0.75
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	571584-571611	7	0.75
NZ_AP022849_1	1.4\|496378\|28\|NZ_AP022849\|CRISPRCasFinder	496378-496405	28	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	146650-146677	7	0.75
NZ_AP022849_1	1.6\|496510\|28\|NZ_AP022849\|CRISPRCasFinder	496510-496537	28	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1601807-1601834	7	0.75
NZ_AP022849_1	1.7\|496179\|30\|NZ_AP022849\|PILER-CR,CRT	496179-496208	30	NZ_CP040763	Paracoccus sp. 2251 plasmid unnamed4, complete sequence	227005-227034	7	0.767
NZ_AP022849_1	1.8\|496245\|30\|NZ_AP022849\|PILER-CR,CRT	496245-496274	30	NZ_CP017300	Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence	381663-381692	7	0.767
NZ_AP022849_1	1.8\|496245\|30\|NZ_AP022849\|PILER-CR,CRT	496245-496274	30	NZ_CP015205	Rhodococcus sp. 008 plasmid pR8C2, complete sequence	14613-14642	7	0.767
NZ_AP022849_1	1.8\|496245\|30\|NZ_AP022849\|PILER-CR,CRT	496245-496274	30	NZ_CP025960	Rhodococcus qingshengii strain djl-6-2 plasmid pDJL1, complete sequence	57953-57982	7	0.767
NZ_AP022849_1	1.8\|496245\|30\|NZ_AP022849\|PILER-CR,CRT	496245-496274	30	NZ_CP016454	Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence	194-223	7	0.767
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_CP030129	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence	144848-144877	7	0.767
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_CP025617	Micrococcus luteus strain SGAir0127 plasmid pSGAir0127	61620-61649	7	0.767
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	62629-62658	7	0.767
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NC_024972	Micrococcus sp. A1 plasmid pLMA1, complete sequence	37764-37793	7	0.767
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	373421-373450	7	0.767
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_CP011296	Rhodococcus erythropolis strain BG43 plasmid pRLCBG43, complete sequence	90914-90943	7	0.767
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NC_048791	Corynebacterium phage Adelaide, complete genome	22444-22473	7	0.767
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	MN062706	Mycobacterium phage Heathen, complete genome	6165-6194	7	0.767
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	KX683423	Mycobacterium phage BabyRay, complete genome	6599-6628	7	0.767
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	NC_042328	Mycobacterium virus HelDan, complete genome	6417-6446	7	0.767
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	MF373840	Mycobacterium phage Fred313, complete genome	6067-6096	7	0.767
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	KJ510415	Mycobacterium phage Phantastic, complete genome	6328-6357	7	0.767
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	MF472895	Mycobacterium phage Kimona, complete genome	9962-9991	7	0.767
NZ_AP022849_2	2.3\|606539\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606539-606568	30	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	288165-288194	7	0.767
NZ_AP022849_2	2.5\|606671\|30\|NZ_AP022849\|CRISPRCasFinder,CRT	606671-606700	30	NZ_CP007144	Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence	133566-133595	7	0.767
NZ_AP022849_2	2.5\|606671\|30\|NZ_AP022849\|CRISPRCasFinder,CRT	606671-606700	30	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1665334-1665363	7	0.767
NZ_AP022849_2	2.7\|606803\|31\|NZ_AP022849\|CRT	606803-606833	31	NZ_CP039892	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499c, complete sequence	34098-34128	7	0.774
NZ_AP022849_3	3.2\|607316\|30\|NZ_AP022849\|CRISPRCasFinder	607316-607345	30	NZ_CP010686	Phaeobacter piscinae strain P14 plasmid pP14_e, complete sequence	5783-5812	7	0.767
NZ_AP022849_3	3.2\|607316\|30\|NZ_AP022849\|CRISPRCasFinder	607316-607345	30	NZ_CP010680	Phaeobacter gallaeciensis strain P75 plasmid pP75_g, complete sequence	24409-24438	7	0.767
NZ_AP022849_3	3.2\|607316\|30\|NZ_AP022849\|CRISPRCasFinder	607316-607345	30	NZ_CP045322	Roseivivax sp. THAF197b plasmid pTHAF197b_d, complete sequence	3113-3142	7	0.767
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	159949-159975	7	0.741
NZ_AP022849_3	3.3\|607382\|27\|NZ_AP022849\|CRISPRCasFinder	607382-607408	27	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	1110847-1110873	7	0.741
NZ_AP022849_3	3.5\|607315\|31\|NZ_AP022849\|CRT	607315-607345	31	NZ_CP010680	Phaeobacter gallaeciensis strain P75 plasmid pP75_g, complete sequence	24408-24438	7	0.774
NZ_AP022849_3	3.5\|607315\|31\|NZ_AP022849\|CRT	607315-607345	31	NZ_CP010686	Phaeobacter piscinae strain P14 plasmid pP14_e, complete sequence	5783-5813	7	0.774
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	468410-468437	7	0.75
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	MK814751	Mycobacterium phage Bananafish, complete genome	21946-21973	7	0.75
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	KX443696	Mycobacterium phage Laurie, complete genome	21945-21972	7	0.75
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	35134-35161	7	0.75
NZ_AP022849_3	3.13\|607579\|30\|NZ_AP022849\|CRISPRCasFinder	607579-607608	30	NZ_CP007515	Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence	87742-87771	7	0.767
NZ_AP022849_3	3.13\|607579\|30\|NZ_AP022849\|CRISPRCasFinder	607579-607608	30	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1351056-1351085	7	0.767
NZ_AP022849_3	3.13\|607579\|30\|NZ_AP022849\|CRISPRCasFinder	607579-607608	30	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1329051-1329080	7	0.767
NZ_AP022849_3	3.14\|607645\|30\|NZ_AP022849\|CRISPRCasFinder	607645-607674	30	NC_024957	Methylibium sp. T29 plasmid pT29A, complete sequence	17438-17467	7	0.767
NZ_AP022849_3	3.14\|607645\|30\|NZ_AP022849\|CRISPRCasFinder	607645-607674	30	NC_024958	Methylibium sp. T29-B plasmid pT29B, complete sequence	17434-17463	7	0.767
NZ_AP022849_3	3.14\|607645\|30\|NZ_AP022849\|CRISPRCasFinder	607645-607674	30	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1412322-1412351	7	0.767
NZ_AP022849_3	3.14\|607645\|30\|NZ_AP022849\|CRISPRCasFinder	607645-607674	30	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	60199-60228	7	0.767
NZ_AP022849_1	1.1\|496180\|28\|NZ_AP022849\|CRISPRCasFinder	496180-496207	28	NZ_CP040763	Paracoccus sp. 2251 plasmid unnamed4, complete sequence	227006-227033	8	0.714
NZ_AP022849_1	1.9\|496311\|30\|NZ_AP022849\|PILER-CR,CRT	496311-496340	30	NC_008713	Paenarthrobacter aurescens TC1 plasmid pTC2, complete sequence	93725-93754	8	0.733
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	146649-146678	8	0.733
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	571915-571944	8	0.733
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_CP042999	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence	7634-7663	8	0.733
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	571583-571612	8	0.733
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	484890-484919	8	0.733
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	194509-194538	8	0.733
NZ_AP022849_1	1.12\|496509\|30\|NZ_AP022849\|PILER-CR,CRT	496509-496538	30	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	86900-86929	8	0.733
NZ_AP022849_1	1.12\|496509\|30\|NZ_AP022849\|PILER-CR,CRT	496509-496538	30	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	137093-137122	8	0.733
NZ_AP022849_1	1.12\|496509\|30\|NZ_AP022849\|PILER-CR,CRT	496509-496538	30	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	157400-157429	8	0.733
NZ_AP022849_1	1.12\|496509\|30\|NZ_AP022849\|PILER-CR,CRT	496509-496538	30	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	201444-201473	8	0.733
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	355290-355319	8	0.733
NZ_AP022849_2	2.3\|606539\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606539-606568	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1875324-1875353	8	0.733
NZ_AP022849_2	2.3\|606539\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606539-606568	30	NZ_LR027520	Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence	176980-177009	8	0.733
NZ_AP022849_2	2.3\|606539\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606539-606568	30	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	896253-896282	8	0.733
NZ_AP022849_2	2.5\|606671\|30\|NZ_AP022849\|CRISPRCasFinder,CRT	606671-606700	30	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	74671-74700	8	0.733
NZ_AP022849_2	2.5\|606671\|30\|NZ_AP022849\|CRISPRCasFinder,CRT	606671-606700	30	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	934155-934184	8	0.733
NZ_AP022849_2	2.5\|606671\|30\|NZ_AP022849\|CRISPRCasFinder,CRT	606671-606700	30	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2299793-2299822	8	0.733
NZ_AP022849_3	3.1\|607251\|29\|NZ_AP022849\|CRISPRCasFinder	607251-607279	29	NZ_LR134455	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence	48192-48220	8	0.724
NZ_AP022849_3	3.4\|607250\|30\|NZ_AP022849\|CRT	607250-607279	30	NZ_LR134455	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence	48191-48220	8	0.733
NZ_AP022849_3	3.4\|607250\|30\|NZ_AP022849\|CRT	607250-607279	30	NZ_CP010870	Confluentimicrobium sp. EMB200-NS6 strain EMBL200_NS6 plasmid pNS6001, complete sequence	13020-13049	8	0.733
NZ_AP022849_3	3.4\|607250\|30\|NZ_AP022849\|CRT	607250-607279	30	NZ_CP045390	Roseivivax sp. THAF30 plasmid pTHAF30_a, complete sequence	25496-25525	8	0.733
NZ_AP022849_3	3.4\|607250\|30\|NZ_AP022849\|CRT	607250-607279	30	NZ_CP045362	Roseivivax sp. THAF40 plasmid pTHAF40_b, complete sequence	25500-25529	8	0.733
NZ_AP022849_3	3.5\|607315\|31\|NZ_AP022849\|CRT	607315-607345	31	NZ_CP045322	Roseivivax sp. THAF197b plasmid pTHAF197b_d, complete sequence	3112-3142	8	0.742
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	159948-159975	8	0.714
NZ_AP022849_3	3.6\|607381\|28\|NZ_AP022849\|CRT	607381-607408	28	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	1110846-1110873	8	0.714
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	NZ_CP007515	Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence	87743-87773	8	0.742
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1351054-1351084	8	0.742
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	655815-655845	8	0.742
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1329049-1329079	8	0.742
NZ_AP022849_3	3.13\|607579\|30\|NZ_AP022849\|CRISPRCasFinder	607579-607608	30	NZ_CP021032	Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence	324835-324864	8	0.733
NZ_AP022849_3	3.14\|607645\|30\|NZ_AP022849\|CRISPRCasFinder	607645-607674	30	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	893133-893162	8	0.733
NZ_AP022849_4	4.1\|607842\|29\|NZ_AP022849\|CRISPRCasFinder	607842-607870	29	NZ_CP033939	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-2, complete sequence	15310-15338	8	0.724
NZ_AP022849_4	4.1\|607842\|29\|NZ_AP022849\|CRISPRCasFinder	607842-607870	29	NZ_CP033938	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-1, complete sequence	22794-22822	8	0.724
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	2880-2909	9	0.7
NZ_AP022849_1	1.10\|496377\|30\|NZ_AP022849\|PILER-CR,CRT	496377-496406	30	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	2880-2909	9	0.7
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	NZ_CP042496	Leclercia adecarboxylata strain E61 plasmid pE61_003, complete sequence	33324-33353	9	0.7
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	NZ_MH909330	Leclercia adecarboxylata strain 150707804 plasmid p707804-1FII, complete sequence	69180-69209	9	0.7
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	NZ_KY126370	Enterobacter cloacae subsp. cloacae strain MN201516 plasmid pOP-I, complete sequence	44239-44268	9	0.7
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	NZ_CP017947	Bosea sp. Tri-49 plasmid unnamed1, complete sequence	308895-308924	9	0.7
NZ_AP022849_2	2.1\|606408\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606408-606437	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2239803-2239832	9	0.7
NZ_AP022849_2	2.3\|606539\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606539-606568	30	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	901310-901339	9	0.7
NZ_AP022849_2	2.3\|606539\|30\|NZ_AP022849\|PILER-CR,CRISPRCasFinder,CRT	606539-606568	30	NZ_CP022191	Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence	288516-288545	9	0.7
NZ_AP022849_3	3.4\|607250\|30\|NZ_AP022849\|CRT	607250-607279	30	CP000385	Mycobacterium sp. MCS Plasmid1, complete sequence	119091-119120	9	0.7
NZ_AP022849_3	3.4\|607250\|30\|NZ_AP022849\|CRT	607250-607279	30	NC_019959	Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence	69337-69366	9	0.7
NZ_AP022849_3	3.4\|607250\|30\|NZ_AP022849\|CRT	607250-607279	30	NC_008704	Mycobacterium sp. KMS plasmid pMKMS02, complete sequence	145150-145179	9	0.7
NZ_AP022849_3	3.9\|607577\|31\|NZ_AP022849\|CRT	607577-607607	31	NZ_CP021032	Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence	324833-324863	9	0.71
NZ_AP022849_3	3.10\|607643\|31\|NZ_AP022849\|CRT	607643-607673	31	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1412320-1412350	9	0.71
NZ_AP022849_3	3.10\|607643\|31\|NZ_AP022849\|CRT	607643-607673	31	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	60197-60227	9	0.71
NZ_AP022849_3	3.13\|607579\|30\|NZ_AP022849\|CRISPRCasFinder	607579-607608	30	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1206375-1206404	9	0.7
NZ_AP022849_3	3.14\|607645\|30\|NZ_AP022849\|CRISPRCasFinder	607645-607674	30	CP003958	Rhodococcus opacus PD630 plasmid 9, complete sequence	19160-19189	9	0.7
NZ_AP022849_3	3.13\|607579\|30\|NZ_AP022849\|CRISPRCasFinder	607579-607608	30	KM597530	Mycobacterium phage Bipolar, complete genome	43227-43256	10	0.667

1. spacer 1.1|496180|28|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

cagataaccgtctcgcctgcgatgatgc	CRISPR spacer
cagataaccgtctcgcctgcgatgatgc	Protospacer
****************************

2. spacer 1.2|496246|28|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

cgggcgatgattgaccagctccgcagcg	CRISPR spacer
cgggcgatgattgaccagctccgcagcg	Protospacer
****************************

3. spacer 1.3|496312|28|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

cgtgctgtggcccgtaatcgtcatcacc	CRISPR spacer
cgtgctgtggcccgtaatcgtcatcacc	Protospacer
****************************

4. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gccgtcgccggcgagcccgaagtccacc	Protospacer
****************************

5. spacer 1.5|496444|28|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

cccgccgagctattcagtgatctcgata	CRISPR spacer
cccgccgagctattcagtgatctcgata	Protospacer
****************************

6. spacer 1.6|496510|28|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

agcaggccctcgttgtttgccgcctcat	CRISPR spacer
agcaggccctcgttgtttgccgcctcat	Protospacer
****************************

7. spacer 1.7|496179|30|NZ_AP022849|PILER-CR,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

acagataaccgtctcgcctgcgatgatgca	CRISPR spacer
acagataaccgtctcgcctgcgatgatgca	Protospacer
******************************

8. spacer 1.8|496245|30|NZ_AP022849|PILER-CR,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

tcgggcgatgattgaccagctccgcagcga	CRISPR spacer
tcgggcgatgattgaccagctccgcagcga	Protospacer
******************************

9. spacer 1.9|496311|30|NZ_AP022849|PILER-CR,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

ccgtgctgtggcccgtaatcgtcatcacct	CRISPR spacer
ccgtgctgtggcccgtaatcgtcatcacct	Protospacer
******************************

10. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgccgtcgccggcgagcccgaagtccacct	Protospacer
******************************

11. spacer 1.11|496443|30|NZ_AP022849|PILER-CR,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

tcccgccgagctattcagtgatctcgatat	CRISPR spacer
tcccgccgagctattcagtgatctcgatat	Protospacer
******************************

12. spacer 1.12|496509|30|NZ_AP022849|PILER-CR,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

tagcaggccctcgttgtttgccgcctcata	CRISPR spacer
tagcaggccctcgttgtttgccgcctcata	Protospacer
******************************

13. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
tgtagaggcatcgccgccgtcaatgacgaa	Protospacer
******************************

14. spacer 2.2|606474|29|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

atgagcgatcgtttcacgatctgcctgcc	CRISPR spacer
atgagcgatcgtttcacgatctgcctgcc	Protospacer
*****************************

15. spacer 2.3|606539|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttgaccatggccggcacgttcaccacg	CRISPR spacer
ttgttgaccatggccggcacgttcaccacg	Protospacer
******************************

16. spacer 2.4|606605|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

gtggtcgcctgagccttcgacagtgacgat	CRISPR spacer
gtggtcgcctgagccttcgacagtgacgat	Protospacer
******************************

17. spacer 2.5|606671|30|NZ_AP022849|CRISPRCasFinder,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

aagcccgaagccaaaatcgcccgcggtgat	CRISPR spacer
aagcccgaagccaaaatcgcccgcggtgat	Protospacer
******************************

18. spacer 2.6|606737|30|NZ_AP022849|CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgatgagagctggaagcatttcgttact	CRISPR spacer
ttcgatgagagctggaagcatttcgttact	Protospacer
******************************

19. spacer 2.7|606803|31|NZ_AP022849|CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

tgattacgccaagcgtttcgttgcgtatcct	CRISPR spacer
tgattacgccaagcgtttcgttgcgtatcct	Protospacer
*******************************

20. spacer 3.1|607251|29|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

tggagagctcgtcggtgatccaggaacct	CRISPR spacer
tggagagctcgtcggtgatccaggaacct	Protospacer
*****************************

21. spacer 3.2|607316|30|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

gtcatcgtcagcacagacgatcagatgcgg	CRISPR spacer
gtcatcgtcagcacagacgatcagatgcgg	Protospacer
******************************

22. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ttgcgggagagccggcgccaggcagcc	Protospacer
***************************

23. spacer 3.4|607250|30|NZ_AP022849|CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

ttggagagctcgtcggtgatccaggaacct	CRISPR spacer
ttggagagctcgtcggtgatccaggaacct	Protospacer
******************************

24. spacer 3.5|607315|31|NZ_AP022849|CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

cgtcatcgtcagcacagacgatcagatgcgg	CRISPR spacer
cgtcatcgtcagcacagacgatcagatgcgg	Protospacer
*******************************

25. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
gttgcgggagagccggcgccaggcagcc	Protospacer
****************************

26. spacer 3.7|607444|32|NZ_AP022849|CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

cctcgggttcacgacgcccgcgcttcgacggc	CRISPR spacer
cctcgggttcacgacgcccgcgcttcgacggc	Protospacer
********************************

27. spacer 3.8|607511|31|NZ_AP022849|CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

acggcaccgtctacctcgcgctattcaccgc	CRISPR spacer
acggcaccgtctacctcgcgctattcaccgc	Protospacer
*******************************

28. spacer 3.9|607577|31|NZ_AP022849|CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

acgagaagaccacgagcgcaacggcgaacag	CRISPR spacer
acgagaagaccacgagcgcaacggcgaacag	Protospacer
*******************************

29. spacer 3.10|607643|31|NZ_AP022849|CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

acagcgcggtgcgcttgtcggtctcgttcga	CRISPR spacer
acagcgcggtgcgcttgtcggtctcgttcga	Protospacer
*******************************

30. spacer 3.11|607522|22|NZ_AP022849|PILER-CR matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

caccgtctacctcgcgctattc	CRISPR spacer
caccgtctacctcgcgctattc	Protospacer
**********************

31. spacer 3.12|607588|23|NZ_AP022849|PILER-CR matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

gaagaccacgagcgcaacggcga	CRISPR spacer
gaagaccacgagcgcaacggcga	Protospacer
***********************

32. spacer 3.13|607579|30|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

gagaagaccacgagcgcaacggcgaacagc	CRISPR spacer
gagaagaccacgagcgcaacggcgaacagc	Protospacer
******************************

33. spacer 3.14|607645|30|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

agcgcggtgcgcttgtcggtctcgttcgag	CRISPR spacer
agcgcggtgcgcttgtcggtctcgttcgag	Protospacer
******************************

34. spacer 4.1|607842|29|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 0, identity: 1.0

acgacagcagagccggaagcgatgcgcgc	CRISPR spacer
acgacagcagagccggaagcgatgcgcgc	Protospacer
*****************************

35. spacer 3.12|607588|23|NZ_AP022849|PILER-CR matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 2, identity: 0.913

gaagaccacgagcgcaacggcga	CRISPR spacer
gaagaccacgagcgccacggcgt	Protospacer
*************** ******

36. spacer 3.12|607588|23|NZ_AP022849|PILER-CR matches to NZ_CP021032 (Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence) position: , mismatch: 2, identity: 0.913

gaagaccacgagcgcaacggcga	CRISPR spacer
gaagaccacgagcgcaattgcga	Protospacer
*****************. ****

37. spacer 3.12|607588|23|NZ_AP022849|PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 2, identity: 0.913

gaagaccacgagcgcaacggcga	CRISPR spacer
gacgaccacgaccgcaacggcga	Protospacer
** ******** ***********

38. spacer 1.2|496246|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP011297 (Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence) position: , mismatch: 4, identity: 0.857

cgggcgatgattgaccagctccgcagcg	CRISPR spacer
aaggcgatgatcgaccatctccgcagcg	Protospacer
 .*********.***** **********

39. spacer 2.4|606605|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NC_019519 (Agrobacterium phage 7-7-1, complete genome) position: , mismatch: 4, identity: 0.867

-gtggtcgcctgagccttcgacagtgacgat	CRISPR spacer
cattgt-gccggagccttcgacagtgacgat	Protospacer
 .* ** *** ********************

40. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NZ_AP014814 (Methylorubrum populi strain P-1M plasmid pMPPM05, complete sequence) position: , mismatch: 4, identity: 0.852

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ttgcgggtgagccggagccaggccgtc	Protospacer
******* ******* ******* *.*

41. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NC_010727 (Methylorubrum populi BJ001 plasmid pMPOP01, complete sequence) position: , mismatch: 4, identity: 0.852

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ttgcgggtgagccggagccaggccgtc	Protospacer
******* ******* ******* *.*

42. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NZ_CP006994 (Methylobacterium sp. AMS5 plasmid pAMS5b, complete sequence) position: , mismatch: 4, identity: 0.852

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ttgcgggtgagccggagccaggccgtc	Protospacer
******* ******* ******* *.*

43. spacer 3.9|607577|31|NZ_AP022849|CRT matches to KC292022 (Halovirus HRTV-5, complete genome) position: , mismatch: 4, identity: 0.871

acgagaagaccacgagcgcaacggcgaacag--	CRISPR spacer
acgagaagaccgcgagcgcgacg--gaacagct	Protospacer
***********.*******.***  ******

44. spacer 3.9|607577|31|NZ_AP022849|CRT matches to MN901521 (Halorubrum coriense virus Serpecor1, complete genome) position: , mismatch: 4, identity: 0.871

acgagaagaccacgagcgcaacggcgaacag--	CRISPR spacer
acgagaagaccgcgagcgcgacg--gaacagct	Protospacer
***********.*******.***  ******

45. spacer 3.9|607577|31|NZ_AP022849|CRT matches to MN901520 (Halorubrum coriense virus Hardycor2, complete genome) position: , mismatch: 4, identity: 0.871

acgagaagaccacgagcgcaacggcgaacag--	CRISPR spacer
acgagaagaccgcgagcgcgacg--gaacagct	Protospacer
***********.*******.***  ******

46. spacer 3.9|607577|31|NZ_AP022849|CRT matches to NC_021321 (Halovirus HRTV-8, complete genome) position: , mismatch: 4, identity: 0.871

acgagaagaccacgagcgcaacggcgaacag--	CRISPR spacer
acgagaagaccgcgagcgcgacg--gaacagct	Protospacer
***********.*******.***  ******

47. spacer 3.9|607577|31|NZ_AP022849|CRT matches to AY190604 (Halovirus HF1, complete genome) position: , mismatch: 4, identity: 0.871

acgagaagaccacgagcgcaacggcgaacag--	CRISPR spacer
acgagaagaccgcgagcgcgacg--gaacagct	Protospacer
***********.*******.***  ******

48. spacer 3.9|607577|31|NZ_AP022849|CRT matches to NC_003345 (Halorubrum phage HF2, complete genome) position: , mismatch: 4, identity: 0.871

acgagaagaccacgagcgcaacggcgaacag--	CRISPR spacer
acgagaagaccgcgagcgcgacg--gaacagct	Protospacer
***********.*******.***  ******

49. spacer 1.2|496246|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP017300 (Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence) position: , mismatch: 5, identity: 0.821

cgggcgatgattgaccagctccgcagcg	CRISPR spacer
aaagcgatgatcgaccacctccgcagcg	Protospacer
 ..********.***** **********

50. spacer 1.2|496246|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP015205 (Rhodococcus sp. 008 plasmid pR8C2, complete sequence) position: , mismatch: 5, identity: 0.821

cgggcgatgattgaccagctccgcagcg	CRISPR spacer
aaagcgatgatcgaccacctccgcagcg	Protospacer
 ..********.***** **********

51. spacer 1.2|496246|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP025960 (Rhodococcus qingshengii strain djl-6-2 plasmid pDJL1, complete sequence) position: , mismatch: 5, identity: 0.821

cgggcgatgattgaccagctccgcagcg	CRISPR spacer
aaagcgatgatcgaccacctccgcagcg	Protospacer
 ..********.***** **********

52. spacer 1.2|496246|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP016454 (Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence) position: , mismatch: 5, identity: 0.821

cgggcgatgattgaccagctccgcagcg	CRISPR spacer
caccggatgattgaccagctccgcaccg	Protospacer
*.   ******************** **

53. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP025584 (Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-01, complete sequence) position: , mismatch: 5, identity: 0.821

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gacgtcgccggcgagcaggaagtccatg	Protospacer
* **************  ********.

54. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP030129 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.821

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
accgtcggcggcgagcccgaggtccccg	Protospacer
.****** ************.**** *

55. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.821

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gccgacgccggcgagcccgaacggctcc	Protospacer
**** ****************   * **

56. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP011296 (Rhodococcus erythropolis strain BG43 plasmid pRLCBG43, complete sequence) position: , mismatch: 5, identity: 0.821

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
accgtcgccggccagcccgaaggagacc	Protospacer
.*********** *********   ***

57. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 5, identity: 0.821

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gcacacgccggcgagcgcgaagtccagc	Protospacer
**   *********** ********* *

58. spacer 1.6|496510|28|NZ_AP022849|CRISPRCasFinder matches to LC201957 (Kocuria palustris plasmid pKPAL2 DNA, complete sequence) position: , mismatch: 5, identity: 0.821

agcaggccctcgttgtttgccgcctcat	CRISPR spacer
cgcaggccctcggtgattgccgccgcgt	Protospacer
 *********** ** ******** *.*

59. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 5, identity: 0.815

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ttgcggacgagccggcgccaggcacga	Protospacer
******. ****************

60. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 5, identity: 0.815

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ctcggggagacccggcgcgaggcagcc	Protospacer
.*  ****** ******* ********

61. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 5, identity: 0.815

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ctcggggagacccggcgcgaggcagcc	Protospacer
.*  ****** ******* ********

62. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 5, identity: 0.815

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ctcggggagacccggcgcgaggcagcc	Protospacer
.*  ****** ******* ********

63. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NZ_AP014814 (Methylorubrum populi strain P-1M plasmid pMPPM05, complete sequence) position: , mismatch: 5, identity: 0.821

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
cttgcgggtgagccggagccaggccgtc	Protospacer
 ******* ******* ******* *.*

64. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NC_010727 (Methylorubrum populi BJ001 plasmid pMPOP01, complete sequence) position: , mismatch: 5, identity: 0.821

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
cttgcgggtgagccggagccaggccgtc	Protospacer
 ******* ******* ******* *.*

65. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NZ_CP006994 (Methylobacterium sp. AMS5 plasmid pAMS5b, complete sequence) position: , mismatch: 5, identity: 0.821

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
cttgcgggtgagccggagccaggccgtc	Protospacer
 ******* ******* ******* *.*

66. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP042999 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence) position: , mismatch: 6, identity: 0.786

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gccgtcgccggcgaggccgaagcggagg	Protospacer
*************** ******.  *

67. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 6, identity: 0.786

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gccgccgccggcgagcccgacgtggagg	Protospacer
****.*************** **  *

68. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 6, identity: 0.786

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
ggattcgccggcgagcccgaagacctcg	Protospacer
*   ****************** ** *

69. spacer 1.6|496510|28|NZ_AP022849|CRISPRCasFinder matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.786

agcaggccctcgttgtttgccgcctcat	CRISPR spacer
acggggccctcgtcgtgtgccgcctcag	Protospacer
*  .*********.** **********

70. spacer 1.6|496510|28|NZ_AP022849|CRISPRCasFinder matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.786

agcaggccctcgttgtttgccgcctcat	CRISPR spacer
acggggccctcgtcgtgtgccgcctcag	Protospacer
*  .*********.** **********

71. spacer 1.6|496510|28|NZ_AP022849|CRISPRCasFinder matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.786

agcaggccctcgttgtttgccgcctcat	CRISPR spacer
acggggccctcgtcgtgtgccgcctcag	Protospacer
*  .*********.** **********

72. spacer 1.6|496510|28|NZ_AP022849|CRISPRCasFinder matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.786

agcaggccctcgttgtttgccgcctcat	CRISPR spacer
acggggccctcgtcgtgtgccgcctcag	Protospacer
*  .*********.** **********

73. spacer 1.8|496245|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP011297 (Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence) position: , mismatch: 6, identity: 0.8

tcgggcgatgattgaccagctccgcagcga	CRISPR spacer
caaggcgatgatcgaccatctccgcagcgg	Protospacer
. .*********.***** **********.

74. spacer 1.8|496245|30|NZ_AP022849|PILER-CR,CRT matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 6, identity: 0.8

tcgggcgatgattgaccagctccgcagcga	CRISPR spacer
ccgcactatgtttgaccagctccgcggcga	Protospacer
.** .* *** **************.****

75. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP025584 (Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-01, complete sequence) position: , mismatch: 6, identity: 0.8

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
agacgtcgccggcgagcaggaagtccatgt	Protospacer
 * **************  ********. *

76. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.8

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
cgccgacgccggcgagcccgaacggctcct	Protospacer
.**** ****************   * ***

77. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 6, identity: 0.8

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgccgtcggcgccgagcccgaagaagaccg	Protospacer
******** ** ***********   ***

78. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NC_048780 (Corynebacterium phage StAB, complete genome) position: , mismatch: 6, identity: 0.8

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgacgtcgccggcgagcccgacggcgagca	Protospacer
** ****************** * * * *

79. spacer 1.12|496509|30|NZ_AP022849|PILER-CR,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 6, identity: 0.8

--tagcaggccctcgttgtttgccgcctcata	CRISPR spacer
cttggc--gccgtcgttgtttgccgcatcatg	Protospacer
  *.**  *** ************** ****.

80. spacer 2.3|606539|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NC_016972 (Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2, complete sequence) position: , mismatch: 6, identity: 0.8

ttgttgaccatggccggcacgttcaccacg	CRISPR spacer
ttctctgccatgtccggcacgatcaccacg	Protospacer
** *. .***** ******** ********

81. spacer 2.3|606539|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

ttgttgaccatggccggcacgttcaccacg	CRISPR spacer
tcgttgaccatggccgccacgttggcgccg	Protospacer
*.************** ****** .*  **

82. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 6, identity: 0.778

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
agctgggagacccggcgcccggcagcc	Protospacer
   .****** ******** *******

83. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 6, identity: 0.778

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
agctgggagacccggcgcccggcagcc	Protospacer
   .****** ******** *******

84. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to MK814751 (Mycobacterium phage Bananafish, complete genome) position: , mismatch: 6, identity: 0.778

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
atgcgggacagccagcgccaggcacaa	Protospacer
 ******* ****.**********

85. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to KX443696 (Mycobacterium phage Laurie, complete genome) position: , mismatch: 6, identity: 0.778

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
atgcgggacagccagcgccaggcacaa	Protospacer
 ******* ****.**********

86. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 6, identity: 0.786

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
cttgcggacgagccggcgccaggcacga	Protospacer
 ******. ****************

87. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 6, identity: 0.786

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
cctcggggagacccggcgcgaggcagcc	Protospacer
 .*  ****** ******* ********

88. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 6, identity: 0.786

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
cctcggggagacccggcgcgaggcagcc	Protospacer
 .*  ****** ******* ********

89. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 6, identity: 0.786

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
cctcggggagacccggcgcgaggcagcc	Protospacer
 .*  ****** ******* ********

90. spacer 3.13|607579|30|NZ_AP022849|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.8

gagaagaccacgagcgcaacggcgaacagc	CRISPR spacer
gcgacgaccacgaccgcaacggcgacgatc	Protospacer
* ** ******** ***********  * *

91. spacer 4.1|607842|29|NZ_AP022849|CRISPRCasFinder matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 6, identity: 0.793

acgacagcagagccggaagcgatgcgcgc	CRISPR spacer
acgacatcagagccggcagcgatgaattc	Protospacer
****** ********* ******* .. *

92. spacer 4.1|607842|29|NZ_AP022849|CRISPRCasFinder matches to NZ_CP022370 (Bosea sp. AS-1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

acgacagcagagccggaagcgatgcgcgc	CRISPR spacer
caggccgcagaggcggaagcgctgcgcgc	Protospacer
  *.* ****** ******** *******

93. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.75

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gccgccgccggcgagaccgaagttgcgg	Protospacer
****.********** *******.

94. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 7, identity: 0.75

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gccgtcgccggcaagcccgaggtggcga	Protospacer
************.*******.**

95. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 7, identity: 0.75

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gccgtcgccggcaagcccgaggtggcga	Protospacer
************.*******.**

96. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.75

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gccgccgccggcgagaccgaagttgcgg	Protospacer
****.********** *******.

97. spacer 1.4|496378|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.75

gccgtcgccggcgagcccgaagtccacc	CRISPR spacer
gccgccgccggcgagaccgaagttgcgg	Protospacer
****.********** *******.

98. spacer 1.6|496510|28|NZ_AP022849|CRISPRCasFinder matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 7, identity: 0.75

agcaggccctcgttgtttgccgcctcat	CRISPR spacer
ttggcgccgtcgttgtttgccgcatcat	Protospacer
   . *** ************** ****

99. spacer 1.7|496179|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

acagat-aaccgtctcgcctgcgatgatgca	CRISPR spacer
-cggctcgaccgtctcgcccgcgatgatgtc	Protospacer
 *.* * .***********.*********.

100. spacer 1.8|496245|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP017300 (Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgggcgatgattgaccagctccgcagcga	CRISPR spacer
caaagcgatgatcgaccacctccgcagcgg	Protospacer
. ..********.***** **********.

101. spacer 1.8|496245|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP015205 (Rhodococcus sp. 008 plasmid pR8C2, complete sequence) position: , mismatch: 7, identity: 0.767

tcgggcgatgattgaccagctccgcagcga	CRISPR spacer
caaagcgatgatcgaccacctccgcagcgg	Protospacer
. ..********.***** **********.

102. spacer 1.8|496245|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP025960 (Rhodococcus qingshengii strain djl-6-2 plasmid pDJL1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgggcgatgattgaccagctccgcagcga	CRISPR spacer
caaagcgatgatcgaccacctccgcagcgg	Protospacer
. ..********.***** **********.

103. spacer 1.8|496245|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP016454 (Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence) position: , mismatch: 7, identity: 0.767

tcgggcgatgattgaccagctccgcagcga	CRISPR spacer
gcaccggatgattgaccagctccgcaccgg	Protospacer
 *.   ******************** **.

104. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP030129 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
caccgtcggcggcgagcccgaggtccccga	Protospacer
..****** ************.**** *

105. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP025617 (Micrococcus luteus strain SGAir0127 plasmid pSGAir0127) position: , mismatch: 7, identity: 0.767

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgccgacgccggcgggcccgaagcagacgc	Protospacer
***** ********.********.  ** .

106. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 7, identity: 0.767

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgccgtcgacggcgatcccgaagacgcttt	Protospacer
******** ****** ******* *  ..*

107. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NC_024972 (Micrococcus sp. A1 plasmid pLMA1, complete sequence) position: , mismatch: 7, identity: 0.767

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgccgacgccggcgggcccgaagcagacgc	Protospacer
***** ********.********.  ** .

108. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 7, identity: 0.767

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
cgcacacgccggcgagcgcgaagtccagcc	Protospacer
.**   *********** ********* *.

109. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP011296 (Rhodococcus erythropolis strain BG43 plasmid pRLCBG43, complete sequence) position: , mismatch: 7, identity: 0.767

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
aaccgtcgccggccagcccgaaggagacca	Protospacer
 .*********** *********   ***

110. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NC_048791 (Corynebacterium phage Adelaide, complete genome) position: , mismatch: 7, identity: 0.767

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgacgtcgccggcgagcccgacggagaaat	Protospacer
** ****************** *   *  *

111. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to MN062706 (Mycobacterium phage Heathen, complete genome) position: , mismatch: 7, identity: 0.767

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
tgggaaggcatcgccgccgtcaacgccgcc	Protospacer
** ..******************.* **

112. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to KX683423 (Mycobacterium phage BabyRay, complete genome) position: , mismatch: 7, identity: 0.767

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
tgggaaggcatcgccgccgtcaacgccgcc	Protospacer
** ..******************.* **

113. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NC_042328 (Mycobacterium virus HelDan, complete genome) position: , mismatch: 7, identity: 0.767

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
tgggaaggcatcgccgccgtcaacgccgcc	Protospacer
** ..******************.* **

114. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to MF373840 (Mycobacterium phage Fred313, complete genome) position: , mismatch: 7, identity: 0.767

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
tgggaaggcatcgccgccgtcaacgccgcc	Protospacer
** ..******************.* **

115. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to KJ510415 (Mycobacterium phage Phantastic, complete genome) position: , mismatch: 7, identity: 0.767

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
tgggaaggcatcgccgccgtcaacgccgcc	Protospacer
** ..******************.* **

116. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to MF472895 (Mycobacterium phage Kimona, complete genome) position: , mismatch: 7, identity: 0.767

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
tcgggtggcatcgccaccgtcaacgacgag	Protospacer
*  .* *********.*******.*****.

117. spacer 2.3|606539|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgttgaccatggccggcacgttcaccacg	CRISPR spacer
aaggtcaccatcgccggcacgttcaccaac	Protospacer
  * * ***** ****************

118. spacer 2.5|606671|30|NZ_AP022849|CRISPRCasFinder,CRT matches to NZ_CP007144 (Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence) position: , mismatch: 7, identity: 0.767

aagcccgaagccaaaatcgcccgcggtgat	CRISPR spacer
gaggccgaagccaaaatagcccgcgaggcc	Protospacer
.** ************* *******. * .

119. spacer 2.5|606671|30|NZ_AP022849|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 7, identity: 0.767

aagcccgaagccaaaatcgcccgcggtgat	CRISPR spacer
aagcccgaagcgaaaatcgcccttctctat	Protospacer
*********** ********** .  . **

120. spacer 2.7|606803|31|NZ_AP022849|CRT matches to NZ_CP039892 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499c, complete sequence) position: , mismatch: 7, identity: 0.774

tgattacgccaagcgtttcgttgcgtatcct	CRISPR spacer
tggttacgccaagcttttcgttgtgcgccca	Protospacer
**.*********** ********.*...**

121. spacer 3.2|607316|30|NZ_AP022849|CRISPRCasFinder matches to NZ_CP010686 (Phaeobacter piscinae strain P14 plasmid pP14_e, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatcgtcagcacagacgatcagatgcgg	CRISPR spacer
gcccgcgtcagcacagacgaccagaagctc	Protospacer
*.*  ***************.**** **

122. spacer 3.2|607316|30|NZ_AP022849|CRISPRCasFinder matches to NZ_CP010680 (Phaeobacter gallaeciensis strain P75 plasmid pP75_g, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatcgtcagcacagacgatcagatgcgg	CRISPR spacer
gcccgcgtcagcacagacgaccagaagctc	Protospacer
*.*  ***************.**** **

123. spacer 3.2|607316|30|NZ_AP022849|CRISPRCasFinder matches to NZ_CP045322 (Roseivivax sp. THAF197b plasmid pTHAF197b_d, complete sequence) position: , mismatch: 7, identity: 0.767

gtcatcgtcagcacagacgatcagatgcgg	CRISPR spacer
gcccgcgtcagcacagacgaccagaagctc	Protospacer
*.*  ***************.**** **

124. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 7, identity: 0.741

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ccgcgggaaagccggcgccaggcgcga	Protospacer
..******.**************.

125. spacer 3.3|607382|27|NZ_AP022849|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 7, identity: 0.741

ttgcgggagagccggcgccaggcagcc	CRISPR spacer
ccgcgggaaagccggcgccaggcgcga	Protospacer
..******.**************.

126. spacer 3.5|607315|31|NZ_AP022849|CRT matches to NZ_CP010680 (Phaeobacter gallaeciensis strain P75 plasmid pP75_g, complete sequence) position: , mismatch: 7, identity: 0.774

cgtcatcgtcagcacagacgatcagatgcgg	CRISPR spacer
cgcccgcgtcagcacagacgaccagaagctc	Protospacer
**.*  ***************.**** **

127. spacer 3.5|607315|31|NZ_AP022849|CRT matches to NZ_CP010686 (Phaeobacter piscinae strain P14 plasmid pP14_e, complete sequence) position: , mismatch: 7, identity: 0.774

cgtcatcgtcagcacagacgatcagatgcgg	CRISPR spacer
cgcccgcgtcagcacagacgaccagaagctc	Protospacer
**.*  ***************.**** **

128. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 7, identity: 0.75

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
cagctgggagacccggcgcccggcagcc	Protospacer
    .****** ******** *******

129. spacer 3.6|607381|28|NZ_AP022849|CRT matches to MK814751 (Mycobacterium phage Bananafish, complete genome) position: , mismatch: 7, identity: 0.75

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
catgcgggacagccagcgccaggcacaa	Protospacer
  ******* ****.**********

130. spacer 3.6|607381|28|NZ_AP022849|CRT matches to KX443696 (Mycobacterium phage Laurie, complete genome) position: , mismatch: 7, identity: 0.75

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
catgcgggacagccagcgccaggcacaa	Protospacer
  ******* ****.**********

131. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 7, identity: 0.75

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
cagctgggagacccggcgcccggcagcc	Protospacer
    .****** ******** *******

132. spacer 3.13|607579|30|NZ_AP022849|CRISPRCasFinder matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

gagaagaccacgagcgcaacggcgaacagc	CRISPR spacer
tcgaagaccacgagcgccacggcgtgcatg	Protospacer
  *************** ****** .**

133. spacer 3.13|607579|30|NZ_AP022849|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.767

gagaagaccacgagcgcaacggcgaacagc	CRISPR spacer
gccgcgagcacgagcgcgacggcgaacatc	Protospacer
*  . ** *********.********** *

134. spacer 3.13|607579|30|NZ_AP022849|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 7, identity: 0.767

gagaagaccacgagcgcaacggcgaacagc	CRISPR spacer
gccgcgagcacgagcgcgacggcgaacatc	Protospacer
*  . ** *********.********** *

135. spacer 3.14|607645|30|NZ_AP022849|CRISPRCasFinder matches to NC_024957 (Methylibium sp. T29 plasmid pT29A, complete sequence) position: , mismatch: 7, identity: 0.767

agcgcggtgcgcttgtcggtctcgttcgag	CRISPR spacer
ggcgcggtgggcttgtcggtctggggcacg	Protospacer
.******** ************ *  *. *

136. spacer 3.14|607645|30|NZ_AP022849|CRISPRCasFinder matches to NC_024958 (Methylibium sp. T29-B plasmid pT29B, complete sequence) position: , mismatch: 7, identity: 0.767

agcgcggtgcgcttgtcggtctcgttcgag	CRISPR spacer
ggcgcggtgggcttgtcggtctggggcacg	Protospacer
.******** ************ *  *. *

137. spacer 3.14|607645|30|NZ_AP022849|CRISPRCasFinder matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 7, identity: 0.767

agcgcggtgcgcttgtcggtctcgttcgag	CRISPR spacer
aacgcggtgtgctggtcggtctcgtcgctg	Protospacer
*.*******.*** ***********.   *

138. spacer 3.14|607645|30|NZ_AP022849|CRISPRCasFinder matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 7, identity: 0.767

agcgcggtgcgcttgtcggtctcgttcgag	CRISPR spacer
tccgcagtgcgcttgccggtctcgtcgggg	Protospacer
  ***.*********.*********. *.*

139. spacer 1.1|496180|28|NZ_AP022849|CRISPRCasFinder matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.714

cagataaccgtctcgcctgcgatgatgc	CRISPR spacer
ggctcgaccgtctcgcccgcgatgatgt	Protospacer
 .  ..***********.*********.

140. spacer 1.9|496311|30|NZ_AP022849|PILER-CR,CRT matches to NC_008713 (Paenarthrobacter aurescens TC1 plasmid pTC2, complete sequence) position: , mismatch: 8, identity: 0.733

ccgtgctgtggcccgtaatcgtcatcacct	CRISPR spacer
ccgtgctgtggcccgaaatcttccgcgagg	Protospacer
*************** **** **  *.

141. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.733

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgccgccgccggcgagaccgaagttgcggc	Protospacer
*****.********** *******.    .

142. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgccgccgccggcgagaccgaagttgcggc	Protospacer
*****.********** *******.    .

143. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP042999 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence) position: , mismatch: 8, identity: 0.733

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
agccgtcgccggcgaggccgaagcggaggc	Protospacer
 *************** ******.  *  .

144. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
tgccgccgccggcgagaccgaagttgcggc	Protospacer
*****.********** *******.    .

145. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 8, identity: 0.733

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
ggccgccgccggcgagcccgacgtggaggc	Protospacer
 ****.*************** **  *  .

146. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 8, identity: 0.733

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
cggattcgccggcgagcccgaagacctcgc	Protospacer
.*   ****************** ** * .

147. spacer 1.12|496509|30|NZ_AP022849|PILER-CR,CRT matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.733

tagcaggccctcgttgtttgccgcctcata	CRISPR spacer
cacggggccctcgtcgtgtgccgcctcagc	Protospacer
.*  .*********.** **********

148. spacer 1.12|496509|30|NZ_AP022849|PILER-CR,CRT matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.733

tagcaggccctcgttgtttgccgcctcata	CRISPR spacer
cacggggccctcgtcgtgtgccgcctcagc	Protospacer
.*  .*********.** **********

149. spacer 1.12|496509|30|NZ_AP022849|PILER-CR,CRT matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.733

tagcaggccctcgttgtttgccgcctcata	CRISPR spacer
cacggggccctcgtcgtgtgccgcctcagc	Protospacer
.*  .*********.** **********

150. spacer 1.12|496509|30|NZ_AP022849|PILER-CR,CRT matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.733

tagcaggccctcgttgtttgccgcctcata	CRISPR spacer
cacggggccctcgtcgtgtgccgcctcagc	Protospacer
.*  .*********.** **********

151. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.733

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
actggaggtatcgccgccggcaatgaccgc	Protospacer
  *.****.********** ******* .

152. spacer 2.3|606539|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.733

ttgttgaccatggccggcacgttcaccacg	CRISPR spacer
tgcccctccatcgccgacacgttcaccacg	Protospacer
*  ..  **** ****.*************

153. spacer 2.3|606539|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 8, identity: 0.733

ttgttgaccatggccggcacgttcaccacg	CRISPR spacer
gcggtgaccatggccgccaggttcacctgc	Protospacer
 .* ************ ** *******

154. spacer 2.3|606539|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 8, identity: 0.733

ttgttgaccatggccggcacgttcaccacg	CRISPR spacer
gccgcgaccatggccggcacgttgacgccg	Protospacer
 .  .****************** **  **

155. spacer 2.5|606671|30|NZ_AP022849|CRISPRCasFinder,CRT matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 8, identity: 0.733

aagcccgaagccaaaatcgcccgcggtgat	CRISPR spacer
cggcaggaagccaaattcgcccgcggttga	Protospacer
 .**  ********* *********** .

156. spacer 2.5|606671|30|NZ_AP022849|CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.733

aagcccgaagccaaaatcgcccgcggtgat	CRISPR spacer
aagcccgaggccaaaaccgcccgtatggcg	Protospacer
********.*******.******..  *

157. spacer 2.5|606671|30|NZ_AP022849|CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.733

aagcccgaagccaaaatcgcccgcggtgat	CRISPR spacer
aagcccgaggccaaaaccgcccgtatggcg	Protospacer
********.*******.******..  *

158. spacer 3.1|607251|29|NZ_AP022849|CRISPRCasFinder matches to NZ_LR134455 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence) position: , mismatch: 8, identity: 0.724

tggagagctcgtcggtgatccaggaacct	CRISPR spacer
cggagggctcgtcggtgatccaccgttcg	Protospacer
.****.****************  . .*

159. spacer 3.4|607250|30|NZ_AP022849|CRT matches to NZ_LR134455 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence) position: , mismatch: 8, identity: 0.733

ttggagagctcgtcggtgatccaggaacct	CRISPR spacer
tcggagggctcgtcggtgatccaccgttcg	Protospacer
*.****.****************  . .*

160. spacer 3.4|607250|30|NZ_AP022849|CRT matches to NZ_CP010870 (Confluentimicrobium sp. EMB200-NS6 strain EMBL200_NS6 plasmid pNS6001, complete sequence) position: , mismatch: 8, identity: 0.733

ttggagagctcgtcggtgatccaggaacct	CRISPR spacer
ttggagagatcgtcggcgatccattgatgc	Protospacer
******** *******.******  .*. .

161. spacer 3.4|607250|30|NZ_AP022849|CRT matches to NZ_CP045390 (Roseivivax sp. THAF30 plasmid pTHAF30_a, complete sequence) position: , mismatch: 8, identity: 0.733

ttggagagctcgtcggtgatccaggaacct	CRISPR spacer
ttggagagatcgtcggcgatccactgatgc	Protospacer
******** *******.******  .*. .

162. spacer 3.4|607250|30|NZ_AP022849|CRT matches to NZ_CP045362 (Roseivivax sp. THAF40 plasmid pTHAF40_b, complete sequence) position: , mismatch: 8, identity: 0.733

ttggagagctcgtcggtgatccaggaacct	CRISPR spacer
ttggagagatcgtcggcgatccactgatgc	Protospacer
******** *******.******  .*. .

163. spacer 3.5|607315|31|NZ_AP022849|CRT matches to NZ_CP045322 (Roseivivax sp. THAF197b plasmid pTHAF197b_d, complete sequence) position: , mismatch: 8, identity: 0.742

cgtcatcgtcagcacagacgatcagatgcgg	CRISPR spacer
tgcccgcgtcagcacagacgaccagaagctc	Protospacer
.*.*  ***************.**** **

164. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 8, identity: 0.714

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
tccgcgggaaagccggcgccaggcgcga	Protospacer
 ..******.**************.

165. spacer 3.6|607381|28|NZ_AP022849|CRT matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 8, identity: 0.714

gttgcgggagagccggcgccaggcagcc	CRISPR spacer
tccgcgggaaagccggcgccaggcgcga	Protospacer
 ..******.**************.

166. spacer 3.9|607577|31|NZ_AP022849|CRT matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.742

acgagaagaccacgagcgcaacggcgaacag	CRISPR spacer
cgtcgaagaccacgagcgccacggcgtgcat	Protospacer
    *************** ****** .**

167. spacer 3.9|607577|31|NZ_AP022849|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.742

-----acgagaagaccacgagcgcaacggcgaacag	CRISPR spacer
tggccgcgag-----cacgagcgcgacggcgaacat	Protospacer
     .****     *********.**********

168. spacer 3.9|607577|31|NZ_AP022849|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.742

acgagaagaccacgagcgcaacggcgaacag	CRISPR spacer
tggcgacgaccacgaccgcaacggcgacgat	Protospacer
  * ** ******** ***********  *

169. spacer 3.9|607577|31|NZ_AP022849|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.742

-----acgagaagaccacgagcgcaacggcgaacag	CRISPR spacer
tggccgcgag-----cacgagcgcgacggcgaacat	Protospacer
     .****     *********.**********

170. spacer 3.13|607579|30|NZ_AP022849|CRISPRCasFinder matches to NZ_CP021032 (Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence) position: , mismatch: 8, identity: 0.733

gagaagaccacgagcgcaacggcgaacagc	CRISPR spacer
ccgaagaccacgagcgcaattgcgatccag	Protospacer
  *****************. **** * .

171. spacer 3.14|607645|30|NZ_AP022849|CRISPRCasFinder matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

agcgcggtgcgcttgtcggtctcgttcgag	CRISPR spacer
tcggcggtgcgcttgacggtctcgagagat	Protospacer
   ************ ********   **

172. spacer 4.1|607842|29|NZ_AP022849|CRISPRCasFinder matches to NZ_CP033939 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-2, complete sequence) position: , mismatch: 8, identity: 0.724

acgacagcagagccggaagcgatgcgcgc	CRISPR spacer
tttgcaacagtgccggaagcgatgcgcat	Protospacer
 . .**.*** ****************..

173. spacer 4.1|607842|29|NZ_AP022849|CRISPRCasFinder matches to NZ_CP033938 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-1, complete sequence) position: , mismatch: 8, identity: 0.724

acgacagcagagccggaagcgatgcgcgc	CRISPR spacer
tttgcaacagtgccggaagcgatgcgcat	Protospacer
 . .**.*** ****************..

174. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 9, identity: 0.7

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
cgccgtcgccggcaagcccgaggtggcgag	Protospacer
.************.*******.**

175. spacer 1.10|496377|30|NZ_AP022849|PILER-CR,CRT matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 9, identity: 0.7

tgccgtcgccggcgagcccgaagtccacct	CRISPR spacer
cgccgtcgccggcaagcccgaggtggcgag	Protospacer
.************.*******.**

176. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042496 (Leclercia adecarboxylata strain E61 plasmid pE61_003, complete sequence) position: , mismatch: 9, identity: 0.7

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
ctccaccgcatcgccgccgtcattgacgac	Protospacer
. . .  *************** ******

177. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH909330 (Leclercia adecarboxylata strain 150707804 plasmid p707804-1FII, complete sequence) position: , mismatch: 9, identity: 0.7

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
ctctaccgcatcgccgccgtcattgacgac	Protospacer
. . .  *************** ******

178. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY126370 (Enterobacter cloacae subsp. cloacae strain MN201516 plasmid pOP-I, complete sequence) position: , mismatch: 9, identity: 0.7

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
ctctacggcatcgccgccgtcattgacaac	Protospacer
. . . **************** ****.*

179. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017947 (Bosea sp. Tri-49 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
ctctatggcttcgccgccgtcaatgtcgag	Protospacer
. . . *** *************** ***.

180. spacer 2.1|606408|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.7

tgtagaggcatcgccgccgtcaatgacgaa	CRISPR spacer
accgtaggcatcgccggcgtcaacgacgcg	Protospacer
  .. *********** ******.**** .

181. spacer 2.3|606539|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 9, identity: 0.7

ttgttgaccatggccggcacgttcaccacg	CRISPR spacer
ggcaccgccatcgccggcacgatcaccacg	Protospacer
    . .**** ********* ********

182. spacer 2.3|606539|30|NZ_AP022849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022191 (Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ttgttgaccatggccggcacgttcaccacg	CRISPR spacer
agccagaccatgaccggcacgatcaccagc	Protospacer
   . *******.******** ******

183. spacer 3.4|607250|30|NZ_AP022849|CRT matches to CP000385 (Mycobacterium sp. MCS Plasmid1, complete sequence) position: , mismatch: 9, identity: 0.7

ttggagagctcgtcggtgatccaggaacct	CRISPR spacer
ttggagaactcgtcggtgatcacgatgatc	Protospacer
*******.*************  *. . ..

184. spacer 3.4|607250|30|NZ_AP022849|CRT matches to NC_019959 (Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence) position: , mismatch: 9, identity: 0.7

ttggagagctcgtcggtgatccaggaacct	CRISPR spacer
ttggagaactcgtcggtgatcacgatgatc	Protospacer
*******.*************  *. . ..

185. spacer 3.4|607250|30|NZ_AP022849|CRT matches to NC_008704 (Mycobacterium sp. KMS plasmid pMKMS02, complete sequence) position: , mismatch: 9, identity: 0.7

ttggagagctcgtcggtgatccaggaacct	CRISPR spacer
ttggagaactcgtcggtgatcacgatgatc	Protospacer
*******.*************  *. . ..

186. spacer 3.9|607577|31|NZ_AP022849|CRT matches to NZ_CP021032 (Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence) position: , mismatch: 9, identity: 0.71

acgagaagaccacgagcgcaacggcgaacag	CRISPR spacer
ttccgaagaccacgagcgcaattgcgatcca	Protospacer
 .  *****************. **** * .

187. spacer 3.10|607643|31|NZ_AP022849|CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 9, identity: 0.71

acagcgcggtgcgcttgtcggtctcgttcga	CRISPR spacer
gaaacgcggtgtgctggtcggtctcgtcgct	Protospacer
. *.*******.*** ***********.

188. spacer 3.10|607643|31|NZ_AP022849|CRT matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 9, identity: 0.71

acagcgcggtgcgcttgtcggtctcgttcga	CRISPR spacer
cgtccgcagtgcgcttgccggtctcgtcggg	Protospacer
    ***.*********.*********. *.

189. spacer 3.13|607579|30|NZ_AP022849|CRISPRCasFinder matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 9, identity: 0.7

gagaagaccacgagcgcaacggcgaacagc	CRISPR spacer
tcatcagccccgagcgcaacggcgaatagc	Protospacer
  .  ..** ****************.***

190. spacer 3.14|607645|30|NZ_AP022849|CRISPRCasFinder matches to CP003958 (Rhodococcus opacus PD630 plasmid 9, complete sequence) position: , mismatch: 9, identity: 0.7

agcgcggtgcgcttgtcggtctcgttcgag	CRISPR spacer
tatgcggtgcgcttgtcggtctcggggagc	Protospacer
 ..*********************   ..

191. spacer 3.13|607579|30|NZ_AP022849|CRISPRCasFinder matches to KM597530 (Mycobacterium phage Bipolar, complete genome) position: , mismatch: 10, identity: 0.667

gagaagaccacgagcgcaacggcgaacagc	CRISPR spacer
tccgctaccacgaccgcaacggcgaacgag	Protospacer
   .  ******* *************..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 10153

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173049843.1\|874_2290_-	hypothetical protein	NA	NA	NA	NA
WP_173049845.1\|2297_3056_-	HNH endonuclease	NA	NA	NA	NA
WP_173049847.1\|3052_4261_-	hypothetical protein	NA	NA	NA	NA
WP_173049850.1\|4263_5463_-	hypothetical protein	NA	NA	NA	NA
WP_173049851.1\|5475_6429_-	hypothetical protein	NA	NA	NA	NA
WP_173049854.1\|6435_7143_-	DotI/IcmL/TraM family protein	NA	NA	NA	NA
WP_173049857.1\|7263_7818_+	hypothetical protein	NA	NA	NA	NA
WP_173049859.1\|7829_8558_-	hypothetical protein	NA	NA	NA	NA
WP_173049861.1\|8707_9127_+	hypothetical protein	NA	NA	NA	NA
WP_173051148.1\|9247_9478_+	acyl carrier protein	M4M9G2	Vibrio_phage	9.4e-05	40.0
WP_173049863.1\|9610_10153_-	HNH endonuclease	H6WG01	Cyanophage	6.7e-17	38.6

DBSCAN-SWA_2

16774 : 17905

Virus_Rctr41k(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173049879.1\|16774_17905_-	DNA (cytosine-5-)-methyltransferase	A0A1P8DJM9	Virus_Rctr41k	4.1e-32	40.1

DBSCAN-SWA_3

21198 : 30040

Tupanvirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173049886.1\|21198_21813_-	DUF488 domain-containing protein	A0A2K9L455	Tupanvirus	2.5e-07	30.8
WP_173049888.1\|21944_23093_+	hypothetical protein	NA	NA	NA	NA
WP_173049890.1\|23082_24033_-	tyrosine recombinase	A0A1P8DJJ6	Virus_Rctr41k	2.0e-16	30.8
WP_173049892.1\|24246_24555_-	hypothetical protein	NA	NA	NA	NA
WP_173049894.1\|24666_25041_+	hypothetical protein	NA	NA	NA	NA
WP_173049896.1\|25435_26065_-	hypothetical protein	NA	NA	NA	NA
WP_173049898.1\|26970_28290_+	RtcB family protein	A0A221J7A7	Mycobacterium_phage	6.2e-24	29.6
WP_173049899.1\|28485_28878_+	hypothetical protein	NA	NA	NA	NA
WP_173049901.1\|28894_30040_-	helix-turn-helix domain-containing protein	L7TKN6	Rhizobium_phage	1.9e-53	37.5

DBSCAN-SWA_4

35296 : 36721

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173049918.1\|35296_36058_-	dTMP kinase	Q2Z0N0	Pseudomonas_phage	3.8e-26	35.0
WP_173049919.1\|36457_36721_-	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	7.7e-11	47.1

DBSCAN-SWA_5

61544 : 65840

Klosneuvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173049959.1\|61544_64238_-	DNA topoisomerase 3	A0A1V0SIB2	Klosneuvirus	2.0e-08	21.7
WP_173049960.1\|64356_65262_+	hypothetical protein	A0A248SJK0	Salicola_phage	9.8e-13	28.3
WP_173049962.1\|65258_65840_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	4.5e-35	41.6

DBSCAN-SWA_6

76995 : 77877

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173049981.1\|76995_77877_+	ATP-dependent DNA ligase	A0A068CDF3	Rhizobium_phage	2.6e-71	50.9

DBSCAN-SWA_7

90666 : 98624

uncultured_Mediterranean_phage(20.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050006.1\|90666_92136_+	hypothetical protein	A0A1B1ITP9	uncultured_Mediterranean_phage	4.3e-26	30.0
WP_173050008.1\|92132_92657_+	DUF4262 domain-containing protein	NA	NA	NA	NA
WP_173050010.1\|92871_93894_-	hypothetical protein	NA	NA	NA	NA
WP_173050012.1\|93983_94793_-	metallophosphoesterase	A0A076YQ07	Rhizobium_phage	4.3e-36	37.9
WP_173050013.1\|94956_95184_-	hypothetical protein	NA	NA	NA	NA
WP_173050014.1\|95260_95683_+\|tRNA	peptidyl-tRNA hydrolase	F8TV29	EBPR_siphovirus	7.3e-27	54.6
WP_173050015.1\|95737_96604_+	hypothetical protein	NA	NA	NA	NA
WP_173050016.1\|96626_96965_-	hypothetical protein	NA	NA	NA	NA
WP_173050017.1\|96961_97324_-	hypothetical protein	NA	NA	NA	NA
WP_173050018.1\|97403_98135_-	metallophosphoesterase family protein	A0A1S6UA53	Serratia_phage	1.4e-09	25.1
WP_173050019.1\|98210_98624_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.4e-22	47.8

DBSCAN-SWA_8

112971 : 113355

Caulobacter_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050035.1\|112971_113355_+	hypothetical protein	K4JQC9	Caulobacter_virus	1.1e-10	43.6

DBSCAN-SWA_9

122863 : 125470

Salmonella_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050055.1\|122863_124099_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	7.7e-77	40.2
WP_173050057.1\|124101_124365_+	hypothetical protein	NA	NA	NA	NA
WP_173050059.1\|124361_124652_+	hypothetical protein	NA	NA	NA	NA
WP_173050061.1\|124657_125470_+	metallophosphoesterase	K4K650	Caulobacter_phage	6.7e-45	39.7

DBSCAN-SWA_10

134264 : 134825

Brucella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050077.1\|134264_134825_+	helix-turn-helix domain-containing protein	A0A141GF24	Brucella_phage	3.2e-06	46.8

DBSCAN-SWA_11

144772 : 146181

Acidovorax_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050100.1\|144772_145294_+	hypothetical protein	A0A218M312	Acidovorax_phage	3.5e-07	41.7
WP_173050101.1\|145293_145512_+	hypothetical protein	NA	NA	NA	NA
WP_173050103.1\|145590_146181_+	NERD domain-containing protein	A0A2R2ZH57	Clostridioides_phage	3.4e-14	33.1

DBSCAN-SWA_12

163330 : 163540

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050143.1\|163330_163540_+	cold-shock protein	A0A218MMZ6	uncultured_virus	2.1e-11	49.3

DBSCAN-SWA_13

176352 : 176946

Orpheovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050149.1\|176352_176946_-	hypothetical protein	A0A2I2L698	Orpheovirus	2.1e-24	36.5

DBSCAN-SWA_14

194147 : 198667

Bradyrhizobium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050190.1\|194147_195533_+	RtcB family protein	A0A1X9SH10	Bradyrhizobium_phage	6.1e-123	50.8
WP_173050192.1\|195638_196340_+	hypothetical protein	NA	NA	NA	NA
WP_173050194.1\|196491_196995_-	dihydrofolate reductase	A0A223LJP4	Erwinia_phage	8.7e-19	37.2
WP_173050195.1\|196991_197828_-	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase	A0A1P8VV89	Erythrobacter_phage	4.3e-47	43.5
WP_173051155.1\|197836_198667_-	thymidylate synthase	A6M9A2	Geobacillus_virus	3.1e-82	55.9

DBSCAN-SWA_15

203091 : 204075

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050206.1\|203091_204075_-	hypothetical protein	A0A1B1IPE0	uncultured_Mediterranean_phage	2.1e-85	48.7

DBSCAN-SWA_16

207112 : 211942

Virus_Rctr197k(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050216.1\|207112_209521_-	AAA family ATPase	A0A1P8DII4	Virus_Rctr197k	2.5e-47	29.8
WP_173050218.1\|209918_210965_+	hypothetical protein	NA	NA	NA	NA
WP_173050220.1\|210964_211942_+	J domain-containing protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	3.9e-07	24.1

DBSCAN-SWA_17

216816 : 219243

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051157.1\|216816_219243_+	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	4.7e-09	55.6

DBSCAN-SWA_18

223564 : 229216

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050241.1\|223564_226414_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.7e-82	30.0
WP_173050243.1\|226410_227349_+	hypothetical protein	NA	NA	NA	NA
WP_173050245.1\|228229_229216_+	lytic transglycosylase domain-containing protein	K4NWI2	Pseudomonas_phage	6.0e-24	45.2

DBSCAN-SWA_19

259092 : 259584

Ostreococcus_mediterraneus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050305.1\|259092_259584_-	dUTP diphosphatase	A0A0P0CP41	Ostreococcus_mediterraneus_virus	2.5e-23	45.7

DBSCAN-SWA_20

270646 : 271297

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051161.1\|270646_271297_+	guanylate kinase	S4VT50	Pandoravirus	1.2e-07	43.3

DBSCAN-SWA_21

276041 : 278006

Sinorhizobium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050330.1\|276041_276818_+	hypothetical protein	A0A0F6SIL8	Sinorhizobium_phage	9.6e-09	48.3
WP_173050332.1\|276830_277301_+	hypothetical protein	NA	NA	NA	NA
WP_173050334.1\|277322_278006_+	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	2.8e-28	40.0

DBSCAN-SWA_22

282898 : 289011

Bradyrhizobium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050347.1\|282898_286597_-	vitamin B12-dependent ribonucleotide reductase	A0A1X9SGV9	Bradyrhizobium_phage	0.0e+00	54.2
WP_173050349.1\|288768_289011_-	DUF2312 domain-containing protein	Q8W6H2	Sinorhizobium_phage	1.5e-21	71.2

DBSCAN-SWA_23

294955 : 297357

Aureococcus_anophage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050362.1\|294955_296599_+	type IA DNA topoisomerase	A0A076FM50	Aureococcus_anophage	1.1e-06	24.4
WP_173050364.1\|296637_297357_+	hypothetical protein	A0A289ZIY5	Serratia_phage	4.7e-34	38.7

DBSCAN-SWA_24

304550 : 305267

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051163.1\|304550_305267_+	response regulator	W8CYM9	Bacillus_phage	1.6e-29	33.8

DBSCAN-SWA_25

313418 : 316025

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050391.1\|313418_316025_+	AAA family ATPase	A0A218KCE8	Bacillus_phage	1.3e-38	27.8

DBSCAN-SWA_26

319665 : 322119

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050395.1\|319665_322119_+	class I SAM-dependent DNA methyltransferase	Q6NE04	Leptospira_phage	2.0e-129	34.6

DBSCAN-SWA_27

328976 : 332356

Orpheovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050408.1\|328976_329948_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	5.0e-63	44.7
WP_173050410.1\|330074_331850_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.6e-59	31.8
WP_173050412.1\|331846_332356_+	macro domain-containing protein	A0A1C3S7D5	Escherichia_phage	2.2e-14	35.9

DBSCAN-SWA_28

337117 : 341164

Xylella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050425.1\|337117_341164_+	bifunctional DNA primase/polymerase	V5Q8Z2	Xylella_phage	3.9e-08	27.8

DBSCAN-SWA_29

359450 : 361310

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050458.1\|359450_361310_+	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	3.5e-57	37.9

DBSCAN-SWA_30

365652 : 366666

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050468.1\|365652_366666_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	4.9e-05	32.5

DBSCAN-SWA_31

373658 : 376835

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050479.1\|373658_376835_-	error-prone DNA polymerase	A0A1C9LWZ5	Streptomyces_phage	1.7e-88	27.7

DBSCAN-SWA_32

389286 : 400685

Pseudomonas_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050503.1\|389286_390753_+	hypothetical protein	A0A2H4P790	Pseudomonas_phage	4.3e-10	34.0
WP_173050505.1\|390792_391137_+	hypothetical protein	NA	NA	NA	NA
WP_173050507.1\|391267_391891_+	porin family protein	NA	NA	NA	NA
WP_173050509.1\|391970_392741_+	segregation/condensation protein A	NA	NA	NA	NA
WP_173050511.1\|392737_393310_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.1e-22	37.8
WP_173050513.1\|393309_393669_+	hypothetical protein	NA	NA	NA	NA
WP_173050515.1\|393677_394277_-	hypothetical protein	NA	NA	NA	NA
WP_173050517.1\|395561_396248_+	ParA family protein	A0A0A8IL09	Aurantimonas_phage	6.0e-55	51.8
WP_173050519.1\|396259_396646_+	hypothetical protein	NA	NA	NA	NA
WP_173050521.1\|396642_396906_-	hypothetical protein	NA	NA	NA	NA
WP_173050523.1\|396935_398429_-	sigma-70 family RNA polymerase sigma factor	F4YCU2	Synechococcus_phage	3.0e-27	36.8
WP_173050525.1\|398542_399052_-	hypothetical protein	NA	NA	NA	NA
WP_173050526.1\|399089_400685_-	extensin family protein	M4SNJ8	Pseudoalteromonas_phage	1.2e-10	34.6

DBSCAN-SWA_33

413700 : 418206

Gordonia_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050555.1\|413700_415308_+	TROVE domain-containing protein	A0A0K0N779	Gordonia_phage	5.1e-105	41.3
WP_173051167.1\|415640_415832_+	DUF433 domain-containing protein	NA	NA	NA	NA
WP_173050557.1\|415883_416411_+	DUF1643 domain-containing protein	A0A1V0EBT6	Caulobacter_phage	5.3e-11	33.3
WP_173050559.1\|416407_417250_+	GIY-YIG nuclease family protein	A0A2C9CXT1	Yersinia_phage	7.0e-05	32.5
WP_173051169.1\|417666_418206_-	hypothetical protein	A0A1L2CVC0	Pectobacterium_phage	2.7e-10	40.8

DBSCAN-SWA_34

421415 : 422717

uncultured_Mediterranean_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051171.1\|421415_422717_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.2e-89	44.6

DBSCAN-SWA_35

437710 : 438622

Bordetella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050604.1\|437710_438622_+	hypothetical protein	A0A291L9Z9	Bordetella_phage	2.4e-11	26.2

DBSCAN-SWA_36

444886 : 446023

Salicola_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050620.1\|444886_446023_-	sigma-70 family RNA polymerase sigma factor	A0A248SJA5	Salicola_phage	2.8e-25	27.1

DBSCAN-SWA_37

450820 : 451648

Acidianus_tailed_spindle_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050634.1\|450820_451648_-	ATP-binding protein	A0A125SJ49	Acidianus_tailed_spindle_virus	8.4e-11	28.9

DBSCAN-SWA_38

468482 : 470567

Sphingobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050669.1\|468482_470567_+	NAD-dependent DNA ligase LigA	A0A1W6DX16	Sphingobium_phage	1.4e-123	41.3

DBSCAN-SWA_39

475371 : 476331

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050687.1\|475371_476331_+	DNA cytosine methyltransferase	G9BWB3	Planktothrix_phage	1.0e-12	32.3

DBSCAN-SWA_40

482141 : 484249

Ruegeria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050699.1\|482141_483905_-	DEAD/DEAH box helicase	A0A1X9HX80	Ruegeria_phage	7.8e-123	45.3
WP_173050701.1\|483901_484249_-	hypothetical protein	A0A1X9HVL1	Ruegeria_phage	6.6e-18	41.7

DBSCAN-SWA_41

495332 : 496022

Salicola_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051179.1\|495332_496022_+	RNA ligase family protein	A0A248SJ81	Salicola_phage	9.3e-48	47.1

DBSCAN-SWA_42

509110 : 510382

Salmonella_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050750.1\|509110_510382_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	2.0e-75	39.7

DBSCAN-SWA_43

517816 : 519613

Stx2-converting_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050765.1\|517816_519613_+	hypothetical protein	Q08J70	Stx2-converting_phage	1.2e-30	29.1

DBSCAN-SWA_44

524950 : 525250

Geobacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050787.1\|524950_525250_-	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	3.6e-12	41.9

DBSCAN-SWA_45

530379 : 531923

Sinorhizobium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050803.1\|530379_531069_-	sigma-70 family RNA polymerase sigma factor	A0A0F6TH34	Sinorhizobium_phage	5.7e-13	32.9
WP_173050805.1\|531065_531923_-	ParB N-terminal domain-containing protein	A0A0U2C144	Paracoccus_phage	2.2e-22	37.6

DBSCAN-SWA_46

535802 : 536867

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050826.1\|535802_536867_+	DNA polymerase IV	I6RSM4	Salmonella_phage	1.8e-21	34.0

DBSCAN-SWA_47

542679 : 544340

Caulobacter_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050843.1\|542679_543498_+	metallophosphoesterase	K4JXC0	Caulobacter_virus	5.4e-18	31.0
WP_173050845.1\|543494_544340_-	Ku protein	A0A218M9C0	Mycobacterium_phage	4.2e-18	28.8

DBSCAN-SWA_48

549069 : 549687

Klebsiella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050855.1\|549069_549687_+	thymidine kinase	A0A0K1Y4R8	Klebsiella_phage	6.6e-37	44.0

DBSCAN-SWA_49

554245 : 559973

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050871.1\|554245_554581_+	DUF2958 domain-containing protein	A0A1B1IV52	uncultured_Mediterranean_phage	3.9e-07	46.0
WP_173050873.1\|554597_555059_+	hypothetical protein	NA	NA	NA	NA
WP_173050875.1\|555081_556602_-	hypothetical protein	NA	NA	NA	NA
WP_173050877.1\|556616_559973_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	4.3e-13	21.7

DBSCAN-SWA_50

563040 : 566829

Bradyrhizobium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050883.1\|563040_563697_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.7e-14	33.3
WP_173050885.1\|563837_564167_+	hypothetical protein	NA	NA	NA	NA
WP_173051184.1\|564418_565357_-	SPFH domain-containing protein	NA	NA	NA	NA
WP_173050887.1\|565593_565911_+	hypothetical protein	NA	NA	NA	NA
WP_173050889.1\|565914_566439_-	hypothetical protein	NA	NA	NA	NA
WP_173050891.1\|566556_566829_-	hypothetical protein	V9QKZ2	Rhizobium_phage	2.5e-28	64.6

DBSCAN-SWA_51

575014 : 575341

Bordetella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050914.1\|575014_575341_+	DUF4031 domain-containing protein	A0A291LA06	Bordetella_phage	4.6e-21	51.9

DBSCAN-SWA_52

582329 : 585470

Monodon_slow_growth-associated_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050923.1\|582329_585470_+	hypothetical protein	F8J2B4	Monodon_slow_growth-associated_virus	1.6e-17	27.2

DBSCAN-SWA_53

590859 : 591459

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050947.1\|590859_591459_+	transglycosylase SLT domain-containing protein	Q3T526	Enterobacteria_phage	3.0e-10	37.5

DBSCAN-SWA_54

594953 : 600467

Ectocarpus_siliculosus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050955.1\|594953_597026_+	response regulator	Q8QNA2	Ectocarpus_siliculosus_virus	2.1e-10	23.9
WP_173051188.1\|597765_598959_+	hypothetical protein	NA	NA	NA	NA
WP_173050958.1\|599218_599392_+	hypothetical protein	NA	NA	NA	NA
WP_173050960.1\|599400_599652_-	hypothetical protein	NA	NA	NA	NA
WP_173050962.1\|599648_600467_-	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	2.0e-25	33.3

DBSCAN-SWA_55

609149 : 613412

Micromonas_sp._RCC1109_virus(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173050975.1\|609149_610568_+\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQ50	Micromonas_sp._RCC1109_virus	2.2e-83	41.5
WP_173050977.1\|610580_611066_-	hypothetical protein	NA	NA	NA	NA
WP_173050979.1\|611067_611562_-	hypothetical protein	NA	NA	NA	NA
WP_173050981.1\|611632_612586_-	metallophosphoesterase	V9QL63	Rhizobium_phage	3.6e-05	29.5
WP_173050983.1\|612578_613412_-	metallophosphoesterase	A0A0A0YWI7	Pseudomonas_phage	2.6e-44	44.1

DBSCAN-SWA_56

620283 : 625770

Agrobacterium_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051000.1\|620283_621249_-	NUDIX domain-containing protein	A0A1B0V161	Roseobacter_phage	3.6e-21	26.2
WP_173051002.1\|621248_621941_-	isochorismatase family protein	NA	NA	NA	NA
WP_173051004.1\|621975_622776_-	hypothetical protein	NA	NA	NA	NA
WP_173051006.1\|622778_624095_-	nicotinate phosphoribosyltransferase	A0A2L0UZQ6	Agrobacterium_phage	2.0e-139	55.4
WP_173051008.1\|624102_625770_-	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	8.2e-90	37.2

DBSCAN-SWA_57

629287 : 631354

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051018.1\|629287_631354_+	EAL domain-containing protein	G3MA91	Bacillus_virus	5.0e-20	36.3

DBSCAN-SWA_58

653936 : 654764

Myxococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051068.1\|653936_654764_+	site-specific DNA-methyltransferase	O03956	Myxococcus_phage	1.1e-42	43.9

DBSCAN-SWA_59

667479 : 672542

Thermus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051098.1\|667479_668703_-\|transposase	transposase	A0A068A1P5	Thermus_phage	1.0e-49	35.6
WP_173051100.1\|668772_668982_-	nucleoside monophosphate kinase	NA	NA	NA	NA
WP_173051194.1\|669159_670011_+	DNA adenine methylase	A0A0K1LM14	Caulobacter_phage	8.7e-88	59.5
WP_173051102.1\|670007_670874_-	hypothetical protein	NA	NA	NA	NA
WP_173051104.1\|670931_671930_-	hypothetical protein	NA	NA	NA	NA
WP_173051106.1\|672122_672542_+	nucleoside-diphosphate kinase	K7YW26	Megavirus	2.6e-16	36.6

DBSCAN-SWA_60

678380 : 679148

Caulobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051121.1\|678380_679148_+	metallophosphoesterase	A0A067XQN2	Caulobacter_phage	4.1e-20	31.8

DBSCAN-SWA_61

685049 : 689039

Bradyrhizobium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173051139.1\|685049_685772_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.3e-44	42.7
WP_173051140.1\|685865_686489_-	RusA family crossover junction endodeoxyribonuclease	J7I4J7	Pseudomonas_phage	1.0e-08	39.1
WP_173051142.1\|686485_686839_-	hypothetical protein	NA	NA	NA	NA
WP_173051144.1\|686921_689039_-	ATP-dependent helicase	S5M596	Bacillus_phage	7.8e-61	28.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP022848

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_AP022849

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection