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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP050692 Streptomyces antibioticus strain DSM 41481 chromosome, complete genome 8 crisprs c2c9_V-U4,csa3,DEDDh,WYL,cas4,cas3,Cas9_archaeal,DinG 0 2 2 0

Results visualization

1. NZ_CP050692
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050692_1 251379-251467 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050692_3 2071575-2071677 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050692_2 2071347-2071486 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050692_4 2846663-2846907 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050692_5 2946299-2946411 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050692_6 6047152-6047295 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050692_7 7058757-7058846 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050692_8 7346752-7346835 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP050692_1 1.1|251407|33|NZ_CP050692|CRISPRCasFinder 251407-251439 33 NZ_CP024309 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence 51213-51245 10 0.697
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 150539-150570 10 0.688
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 274662-274693 10 0.688
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NZ_AP019795 Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence 191360-191391 10 0.688
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NZ_LR027520 Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence 225661-225692 10 0.688
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NZ_LR027520 Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence 270781-270812 10 0.688
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NZ_LR027520 Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence 300224-300255 10 0.688
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NZ_LR027520 Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence 310426-310457 10 0.688
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NZ_LR027520 Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence 342127-342158 10 0.688
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NZ_LR027520 Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence 363130-363161 10 0.688
NZ_CP050692_8 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder 7346778-7346809 32 NZ_AP019793 Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence 1144-1175 10 0.688

1. spacer 1.1|251407|33|NZ_CP050692|CRISPRCasFinder matches to NZ_CP024309 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence) position: , mismatch: 10, identity: 0.697

cctgtagtggctgcgaccgccgccgcgaccctc	CRISPR spacer
ttggctgtggctgcgaccgccgccgtggccgcg	Protospacer
.. *. *******************.*.** . 

2. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

3. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

4. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

5. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

6. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

7. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

8. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

9. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

10. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

11. spacer 8.1|7346778|32|NZ_CP050692|CRISPRCasFinder matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 10, identity: 0.688

tgagcgtgggcgttggctgaggggtgccgggc	CRISPR spacer
atgatggaggcggtggctgagcggtgccgggt	Protospacer
  ...* .**** ******** *********.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 7048857 : 7058109 18 Streptomyces_phage(50.0%) NA NA
DBSCAN-SWA_2 7101391 : 7109802 15 Streptomyces_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage