CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP050746	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-1, complete sequence	0 crisprs	cas14j	0	11
NZ_CP050749	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-4, complete sequence	0 crisprs	NA	0	0
NZ_CP050747	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-2, complete sequence	0 crisprs	RT	0	1
NZ_CP050745	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 chromosome, complete genome	5 crisprs	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas14j,DEDDh,DinG,RT	37	13
NZ_CP050748	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence	1 crisprs	NA	1	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

44084 : 52527

Rhodococcus_virus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000117626.1\|44084_44585_-	antirestriction protein	G9FHQ1	Rhodococcus_virus	7.1e-05	26.5
WP_000977995.1\|45046_45643_-	hypothetical protein	A0A0N7KZV3	Escherichia_phage	9.0e-15	56.6
WP_012783927.1\|45639_46359_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_001402001.1\|46355_46790_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_063267868.1\|46842_48801_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	1.2e-20	30.0
WP_015508350.1\|48859_49093_-	DUF905 domain-containing protein	A0A096XUX0	Cronobacter_phage	2.3e-06	53.2
WP_012783926.1\|49150_49678_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	2.1e-47	73.5
WP_012372796.1\|50859_52527_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.7e-164	53.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP050746

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 14879

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000979451.1\|2949_3252_+	transcriptional regulator PefB	NA	NA	NA	NA
WP_000748205.1\|3526_4045_+	major pilin PefA	NA	NA	NA	NA
WP_000007893.1\|4272_6681_+	outer membrane usher protein PefC	NA	NA	NA	NA
WP_001038510.1\|6673_7366_+	fimbrial chaperone PefD	NA	NA	NA	NA
WP_010999940.1\|7380_7938_+	membrane protein	NA	NA	NA	NA
WP_014343944.1\|8190_9066_+	hypothetical protein	NA	NA	NA	NA
WP_000004313.1\|9497_9710_+	transcriptional regulator PefI	NA	NA	NA	NA
WP_001526811.1\|9694_10045_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000178592.1\|10289_10943_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_001192557.1\|10932_11079_+	hypothetical protein	NA	NA	NA	NA
WP_010999938.1\|11075_11975_+	YjiK family protein	NA	NA	NA	NA
WP_167787428.1\|12064_12616_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	3.0e-20	37.8
WP_000957857.1\|12704_12893_+	hypothetical protein	NA	NA	NA	NA
WP_000220561.1\|14597_14879_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	2.9e-24	62.4

DBSCAN-SWA_2

18518 : 23824

Escherichia_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000572405.1\|18518_19313_+	aminoglycoside O-phosphotransferase APH(3')-IIa	Q75ZG1	Hepacivirus	9.5e-153	100.0
WP_001067858.1\|19619_20324_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001067855.1\|23119_23824_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_3

30118 : 30859

Xanthomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000177629.1\|30118_30859_-	conjugal transfer pilus acetylase TraX	A0A077JBM8	Xanthomonas_phage	3.9e-07	30.8

DBSCAN-SWA_4

48765 : 49185

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001229397.1\|48765_49185_-	HNH endonuclease	C6ZR29	Salmonella_phage	2.2e-68	88.9

DBSCAN-SWA_5

55654 : 55876

Vibrio_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001278699.1\|55654_55876_-	conjugal transfer protein TraR	A2I309	Vibrio_virus	1.0e-08	42.3

DBSCAN-SWA_6

66109 : 70015

Emiliania_huxleyi_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000117513.1\|66109_68107_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	5.5e-16	30.0
WP_000131520.1\|68175_68418_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_000741240.1\|68472_68991_-	single-stranded DNA-binding protein SSB2	A0A0A0P1Q9	Enterobacteria_phage	6.8e-51	82.5
WP_000015983.1\|69691_70015_-	hypothetical protein	G8C7V1	Escherichia_phage	2.0e-13	56.5

DBSCAN-SWA_7

73207 : 82503

Escherichia_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000088645.1\|73207_73888_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.4
WP_000369839.1\|74269_74626_-	hypothetical protein	NA	NA	NA	NA
WP_000490265.1\|74618_75089_-	hypothetical protein	NA	NA	NA	NA
WP_000925627.1\|75599_76022_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.0e-28	51.6
WP_000457541.1\|76021_77296_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	3.0e-156	64.5
WP_000064274.1\|77377_78352_-	ParB/RepB/Spo0J family partition protein	A0A1B0V750	Salmonella_phage	5.1e-84	53.2
WP_000427676.1\|78351_79557_-	ParA family protein	A0A077SL49	Escherichia_phage	1.5e-162	69.3
WP_000728917.1\|79971_80913_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.0e-72	54.3
WP_001541562.1\|80944_81511_-	DUF2913 family protein	NA	NA	NA	NA
WP_001527010.1\|81567_81903_-	hypothetical protein	NA	NA	NA	NA
WP_001541564.1\|82086_82503_-	hypothetical protein	O64348	Escherichia_phage	8.2e-07	42.9

DBSCAN-SWA_8

88520 : 94133

Bacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001083725.1\|88520_89018_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_071523897.1\|89174_89420_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001206356.1\|89425_90217_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_167787430.1\|90720_91560_+	sulfonamide-resistant dihydropteroate synthase Sul1	S4VNV0	Pandoravirus	1.1e-10	26.3
WP_000376616.1\|91687_91891_+	hypothetical protein	NA	NA	NA	NA
WP_000184001.1\|92046_93252_+	chromate efflux transporter	NA	NA	NA	NA
WP_167787432.1\|93473_94133_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.4e-125	100.0

DBSCAN-SWA_9

98178 : 101615

Escherichia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067858.1\|98178_98883_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_000346691.1\|100383_101277_+	virulence genes transcriptional activator SpvR	NA	NA	NA	NA
WP_001576629.1\|101450_101615_+	glycoside hydrolase family protein	A0A0M4R365	Salmonella_phage	3.3e-12	63.0

DBSCAN-SWA_10

107038 : 107389

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001541541.1\|107038_107389_+	helix-turn-helix domain-containing protein	A0A077SLN2	Escherichia_phage	1.9e-44	80.5

DBSCAN-SWA_11

110449 : 111232

Macacine_betaherpesvirus(100.0%)

integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000082169.1\|110449_111232_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.6e-51	91.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP050748

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050748_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050748_1

5835-5954

Orphan

Consensus_repeat	Method
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050748_1

>merge|NZ_CP050748|1|5835-5954|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCACTGTAATTTTCATGAAAGGTGGATGGCTGCGCACTGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

>NZ_CP050748|1|1|5835-5954|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA	CTGTAATTTTCATGAAAGGTGGATGGCTGCGCAC
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050748.1\|WP_024129959.1\|6206_7046_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NZ_CP050748.1\|WP_001067858.1\|3336_4041_+\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP050748.1\|WP_000347021.1\|1585_1765_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050748.1\|WP_001074384.1\|7912_8359_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050748.1\|WP_000957857.1\|4916_5105_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050748.1\|WP_000051066.1\|10874_11105_-\|partitioning-protein	unknown	unknown	gnl\|CDD\|117819
NZ_CP050748.1\|WP_012291478.1\|9386_10451_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379293
NZ_CP050748.1\|WP_024129958.1\|8495_8849_+\|DNA-distortion-protein-3	unknown	unknown	unknown
NZ_CP050748.1\|WP_000203199.1\|825_1470_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239736
NZ_CP050748.1\|WP_000435064.1\|7066_7909_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444

Protein	Function_ID	Function_description	E-value
NZ_CP050748.1\|WP_024129959.1\|6206_7046_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	1.05812e-22
NZ_CP050748.1\|WP_001067858.1\|3336_4041_+\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.07441e-69
NZ_CP050748.1\|WP_000435064.1\|7066_7909_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	6.74541e-13
NZ_CP050748.1\|WP_000051066.1\|10874_11105_-\|partitioning-protein	gnl\|CDD\|117819	pfam09274, ParG, ParG. Members of this family of plasmid partition proteins adopt a ribbon-helix-helix fold, with a core of four alpha-helices. They are an essential component of the DNA partition complex of the multidrug resistance plasmid TP228.	4.81797e-42
NZ_CP050748.1\|WP_000203199.1\|825_1470_+\|recombinase-family-protein	gnl\|CDD\|239736	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subgroup is composed of proteins similar to the E. coli resolvase found in the par region of the RP4 plasmid, which encodes a highly efficient partitioning system. This protein is part of a complex stabilization system involved in the resolution of plasmid dimers during cell division. Similar to Tn3 and other resolvases, members of this family may contain a C-terminal DNA binding domain.	3.98678e-71
NZ_CP050748.1\|WP_012291478.1\|9386_10451_-\|AAA-family-ATPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	4.38468e-29

>NZ_CP050748.1|WP_000957857.1|4916_5105_-|hypothetical-protein
MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVTTSILKRRGDTAALTLLQDTGV
>NZ_CP050748.1|WP_001067858.1|3336_4041_+|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>NZ_CP050748.1|WP_000347021.1|1585_1765_-|hypothetical-protein
MDFMSILGRCLLLPFPVAMFVGCLFPGIDDRFTGMFMSFIVGCLSWYITKPKPQKAEVA
>NZ_CP050748.1|WP_000203199.1|825_1470_+|recombinase-family-protein
MTSNAPTNFVRAYLRASTAEQDASRALETIEAFARERGLIICSYYIENESGSRLDRPELFRLLRDCQQNDILLIEDVDRLSRLSGEDWNTLKKMIRQKDIRVMAVNVPTTWINSGMSEFDSRLFAAINDMLLDMLAAVARRDYEQRRERQKQGIEKARKDGKYKGRKPNQARHDAIIRLIESGSSWTQVQKVLGCSRGTISSAIKRKSLQSSGE
>NZ_CP050748.1|WP_024129959.1|6206_7046_+|replication-initiation-protein
MNLLSVTKKTKIRHRNEINSTFSSLPLSARRILFMAMAQIDSREELSEGATFRITAREYAFIADIDVTGAYRQLKEGAEELQASVIRIPRNQLLTAQGNQSSGHTKKRGKLPSDAVRLMNLTAFCDYVESEGYIDIAFSHVIEPYITMLKDSYTTQVLISSVRLADQNSNMLYQFIRKQYSSGKKTFFDIEVDVLKDELELFRIDNGEKVYLYQNFKDFNKVFLQKNIEKINQYTEINHLEVKIVKRVARRASKLRFSYKIDKESEGLDTRIPYGFRGA
>NZ_CP050748.1|WP_000435064.1|7066_7909_+|replication-initiation-protein
MEQIKLHKQGGAAVIIIPASMIENTGWEDGTLLEVLEINETLHIRRKTESGALATKACPSLFSSTMRHVNYDKIIRYNSGLNLLVNELSFSARRVFFICLYYYFENKLESDKSLLIRADKYAEFVGVERSVAYKQMKDAADFFSRNKNLITHCDYISNEGLLRVMFSSKTINYITAIDSRKYQVTELPLKSALSLQGRYSWPLYQLIKFSHLKSFTIGVDELKKEIGYIQNQKFSFFKRDGINIAIDEITERTDVKNIKCVNAERQGRRVSKVRFEIEMR
>NZ_CP050748.1|WP_001074384.1|7912_8359_+|hypothetical-protein
MAKIYQFPQGEERAKFRKEIARERKKRFAVKTGSTFVKWLGWGWFYLRLLAASVLHFIFVFVLAILGAFKWAVFWLGGILCVITWYHLDHQLWTPQNLTIPVITATWILGLLAEPLMELLNKTMPWHKLLVPEPADESTENSSEISQQ
>NZ_CP050748.1|WP_024129958.1|8495_8849_+|DNA-distortion-protein-3
MKYLVKEFINEKYSKAVNILKDNLKEHYHVFYGVRLSEILFPTSEYGTDAFFKEFELINSVILPLVIFDFIDRKPIMVIGFEEAPGIDSLIDSGMEVVLLDGLSDLLLVEKLMPLFD
>NZ_CP050748.1|WP_012291478.1|9386_10451_-|AAA-family-ATPase
MKTISLFNNKGGVGKTTLTWNLSVSLSAKGKSVLLIDFDPQCNLSIALLGETGFSDLLKKDANNPYGKTIRAFCQPFIQQDILPVVHTFPPQFPMEPGSGRLDIAPGDFWLNNLSDVISVGTDLIAGNAVNRFLIPSLIASKAQELNNCEYDYVLIDVPPSFNTIVRSALYCSDYFLVPCTADIFSAYCIGLIGETLPKFRDDWEQGIRRTSAQNNSLISQKGSPKFAGWVFNGFDKRKNPGQQNSSEIAADAAHRDKIIDSVKNDLRPKLASIKTYSAVASFTPDTPVAKVEDLNVMAPDSILQGVPLRYLSTVAPTRGVLARGAWSGPQKALMQTMSAEHDVLADYIIQNFV
>NZ_CP050748.1|WP_000051066.1|10874_11105_-|partitioning-protein
MSLEKAHTSVKKMTFGENRDLERVVTAPVSSGKIKRVNVNFDEEKHTRFKAACARKGTSITDVVNQLVDNWLKENE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_KX518744	Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence	63874-63907	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP041286	Escherichia coli strain 54 plasmid p54-tetX, complete sequence	64169-64202	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_KU321583	Escherichia coli strain E80 plasmid pE80, complete sequence	38215-38248	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_KT990220	Escherichia coli strain 42-2 plasmid p42-2, complete sequence	37006-37039	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP010164	Escherichia coli strain H2 plasmid A, complete sequence	20751-20784	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP019647	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence	239581-239614	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP022964	Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence	30266-30299	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP024467	Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence	17630-17663	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	16611-16644	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	53074-53107	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	32601-32634	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP047093	Salmonella sp. S13 plasmid pS13-4, complete sequence	1762-1795	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP051432	Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence	23725-23758	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP046002	Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence	35337-35370	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	26770-26803	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	41390-41423	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	60962-60995	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	39391-39424	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032389	Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence	9889-9922	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_LT904873	Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2	5696-5729	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_KT754163	Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence	12265-12298	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP033383	Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence	7366-7399	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP020836	Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence	20407-20440	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	93494-93527	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP043216	Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence	32193-32226	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	25537-25570	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP031361	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence	27033-27066	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP044153	Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence	25749-25782	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP040929	Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence	2187-2220	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP033386	Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence	34721-34754	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP041177	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence	4942-4975	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP034761	Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence	47580-47613	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050707	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence	14631-14664	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP047339	Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence	28949-28982	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_010860	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence	32623-32656	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP022453	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence	5893-5926	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP024153	Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence	53536-53569	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP030208	Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence	39815-39848	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP005994	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence	30028-30061	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032450	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence	29110-29143	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP010155	Escherichia coli strain D9 plasmid C, complete genome	14497-14530	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	58667-58700	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP029061	Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence	10786-10819	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP042589	Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence	29459-29492	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP025677	Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence	79278-79311	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	54169-54202	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MN816373	Escherichia coli strain A127 plasmid pA127-X1, complete sequence	29459-29492	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP052879	Escherichia coli strain C21 plasmid pC21-2, complete sequence	61147-61180	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	99797-99830	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	88012-88045	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050724	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence	41949-41982	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	53619-53652	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_019106	Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence	32551-32584	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP010127	Escherichia coli strain C8 plasmid B, complete genome	33248-33281	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	85971-86004	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP022072	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence	18650-18683	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	20398-20431	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	147056-147089	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP045998	Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence	35339-35372	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032394	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence	32800-32833	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_019256	Shigella sp. LN126 plasmid pLN126_33, complete sequence	2112-2145	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MH884649	Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence	16816-16849	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MH884651	Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence	68260-68293	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MH229869	Escherichia coli plasmid pKANJ7, complete sequence	90-123	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050713	Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence	33434-33467	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP041439	Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence	96892-96925	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP041443	Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence	63333-63366	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MK461931	Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence	238663-238696	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MK656937	Escherichia coli strain T3 plasmid pT3, complete sequence	37880-37913	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MK731977	Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence	22155-22188	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MK673546	Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence	28203-28236	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	18380-18413	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	118004-118037	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	151970-152003	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MH287085	Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence	243053-243086	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MH287084	Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence	241163-241196	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP025558	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence	11939-11972	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	90443-90476	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT219826	Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence	43726-43759	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MG904998	Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence	48918-48951	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MG197491	Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence	33352-33385	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MG197498	Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence	58347-58380	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MG197503	Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence	61256-61289	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MG197495	Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence	61256-61289	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	27964-27997	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MG197502	Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence	61256-61289	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT219818	Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence	43736-43769	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT219820	Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence	80789-80822	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT219822	Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence	38970-39003	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT219823	Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence	73817-73850	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_023323	Escherichia coli ACN001 plasmid pACN001-A, complete sequence	18865-18898	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MF554637	uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence	14942-14975	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP016575	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence	296-329	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP020060	Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence	30572-30605	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032994	Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence	10049-10082	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MN783746	Escherichia coli plasmid pIncX1_p1, complete sequence	5290-5323	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_KX815983	Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence	40397-40430	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_KU254580	Escherichia coli strain YD786 plasmid pYD786-3, complete sequence	25507-25540	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP042633	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence	38916-38949	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032392	Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence	67739-67772	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP019272	Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence	35028-35061	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP053728	Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence	69102-69135	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP037995	Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281	7255-7288	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP053740	Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence	9971-10004	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP016580	Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence	23703-23736	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP046001	Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence	49989-50022	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP021103	Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence	56470-56503	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP029182	Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence	2302-2335	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	90173-90206	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP053047	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence	9874-9907	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP014974	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence	295-328	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032397	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence	220331-220364	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP035774	Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence	12757-12790	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP044182	Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence	25543-25576	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP042608	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence	7171-7204	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MK461930	Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence	45261-45294	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_019046	Escherichia coli plasmid pNMEC31_31, complete sequence	31361-31394	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	89191-89224	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	30748-30781	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP035315	Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence	28493-28526	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050748	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence	5878-5911	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_024961	Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence	905-938	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	4017-4050	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_LT985261	Escherichia coli strain 657 plasmid RCS50_p, complete sequence	42585-42618	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_AP019678	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence	49115-49148	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP009074	Escherichia coli ATCC 25922 plasmid unnamed, complete sequence	21137-21170	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP010168	Escherichia coli strain H3 plasmid A, complete genome	25682-25715	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_010378	Escherichia coli plasmid pOLA52, complete sequence	34562-34595	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	CP016512	Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence	23704-23737	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP016529	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence	23704-23737	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP016518	Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence	23705-23738	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032988	Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence	50710-50743	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP017633	Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence	23885-23918	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP012922	Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence	23704-23737	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP033093	Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence	19532-19565	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP012926	Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence	37369-37402	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP023360	Escherichia coli strain 1943 plasmid p54, complete sequence	52726-52759	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	CP043734	Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence	37807-37840	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP039600	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence	32872-32905	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP030283	Escherichia coli strain E308 plasmid pLKSZ02, complete sequence	49947-49980	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_011204	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence	70648-70681	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	23689-23722	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050710	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence	15569-15602	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP024290	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence	33653-33686	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP048777	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence	1446-1479	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP041631	Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence	4799-4832	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050773	Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence	30707-30740	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP041444	Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence	38005-38038	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP019180	Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence	24566-24599	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050765	Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence	6593-6626	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_010422	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence	59434-59467	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050759	Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence	5734-5767	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_AP022652	Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence	295-328	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	79478-79511	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_LT985315	Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence	47119-47152	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MN436006	Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence	27492-27525	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MN436007	Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence	27131-27164	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	44664-44697	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP045839	Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence	48284-48317	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP032381	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence	12454-12487	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MG825381	Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence	43402-43435	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT197111	Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence	12897-12930	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	59284-59317	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT219819	Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence	118931-118964	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	MT219821	Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence	3734-3767	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MG288677	Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence	29004-29037	0	1.0
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP030195	Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence	159-192	1	0.971
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP033353	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence	78450-78483	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP050780	Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence	203947-203980	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP022061	Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence	1711-1744	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	CP048927	Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence	45611-45644	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP029841	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence	98434-98467	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP028313	Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence	41569-41602	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP018662	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence	41992-42025	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	CP049987	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence	41386-41419	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	CP049982	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence	42740-42773	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NC_010421	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence	27662-27695	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_MK625201	Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence	41824-41857	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP023476	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence	33473-33506	2	0.941
NZ_CP050748_1	1.1\|5878\|34\|NZ_CP050748\|CRISPRCasFinder	5878-5911	34	NZ_CP044292	Escherichia coli strain P43A plasmid pP43A-1, complete sequence	44259-44292	4	0.882

1. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_KX518744 (Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

2. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

3. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_KU321583 (Escherichia coli strain E80 plasmid pE80, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

4. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_KT990220 (Escherichia coli strain 42-2 plasmid p42-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

5. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP010164 (Escherichia coli strain H2 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

6. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP019647 (Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

7. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP022964 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

8. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP024467 (Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

9. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

10. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

11. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

12. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP047093 (Salmonella sp. S13 plasmid pS13-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

13. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP051432 (Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

14. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP046002 (Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

15. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

16. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

17. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

18. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

19. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032389 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

20. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_LT904873 (Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

21. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_KT754163 (Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

22. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP033383 (Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

23. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP020836 (Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

24. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

25. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP043216 (Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

26. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

27. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP031361 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

28. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP044153 (Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

29. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP040929 (Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

30. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP033386 (Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

31. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP041177 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

32. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP034761 (Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

33. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050707 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

34. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP047339 (Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

35. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_010860 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

36. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP022453 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

37. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP024153 (Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

38. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

39. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP005994 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

40. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

41. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP010155 (Escherichia coli strain D9 plasmid C, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

42. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

43. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP029061 (Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

44. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP042589 (Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

45. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP025677 (Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

46. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

47. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MN816373 (Escherichia coli strain A127 plasmid pA127-X1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

48. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP052879 (Escherichia coli strain C21 plasmid pC21-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

49. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

50. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

51. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050724 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

52. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP047573 (Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

53. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

54. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP010127 (Escherichia coli strain C8 plasmid B, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

55. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

56. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP022072 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

57. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

58. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

59. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP045998 (Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

60. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

61. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_019256 (Shigella sp. LN126 plasmid pLN126_33, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

62. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MH884649 (Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

63. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MH884651 (Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

64. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MH229869 (Escherichia coli plasmid pKANJ7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

65. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050713 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

66. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP041439 (Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

67. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

68. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MK461931 (Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

69. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MK656937 (Escherichia coli strain T3 plasmid pT3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

70. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MK731977 (Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

71. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MK673546 (Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

72. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

73. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

74. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

75. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MH287085 (Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

76. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MH287084 (Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

77. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP025558 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

78. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

79. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

80. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MG904998 (Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

81. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MG197491 (Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

82. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MG197498 (Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

83. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MG197503 (Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

84. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MG197495 (Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

85. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

86. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MG197502 (Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

87. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

88. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

89. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT219822 (Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

90. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

91. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_023323 (Escherichia coli ACN001 plasmid pACN001-A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

92. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MF554637 (uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

93. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP016575 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

94. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP020060 (Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

95. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032994 (Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

96. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MN783746 (Escherichia coli plasmid pIncX1_p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

97. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_KX815983 (Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

98. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_KU254580 (Escherichia coli strain YD786 plasmid pYD786-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

99. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP042633 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

100. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

101. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP019272 (Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

102. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP053728 (Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

103. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP037995 (Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

104. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP053740 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

105. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP016580 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

106. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP046001 (Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

107. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP021103 (Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

108. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP029182 (Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

109. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

110. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP053047 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

111. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP014974 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

112. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032397 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

113. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP035774 (Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

114. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP044182 (Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

115. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP042608 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

116. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MK461930 (Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

117. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_019046 (Escherichia coli plasmid pNMEC31_31, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

118. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

119. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

120. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP035315 (Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

121. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050748 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

122. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_024961 (Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

123. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_021842 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

124. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_LT985261 (Escherichia coli strain 657 plasmid RCS50_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

125. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_AP019678 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

126. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP009074 (Escherichia coli ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

127. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP010168 (Escherichia coli strain H3 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

128. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_010378 (Escherichia coli plasmid pOLA52, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

129. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to CP016512 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

130. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP016529 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

131. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP016518 (Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

132. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032988 (Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

133. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP017633 (Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

134. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP012922 (Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

135. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP033093 (Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

136. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP012926 (Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

137. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP023360 (Escherichia coli strain 1943 plasmid p54, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

138. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to CP043734 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

139. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP039600 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

140. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP030283 (Escherichia coli strain E308 plasmid pLKSZ02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

141. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

142. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_017624 (Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

143. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050710 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

144. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP024290 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

145. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP048777 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

146. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP041631 (Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

147. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050773 (Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

148. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP041444 (Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

149. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

150. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050765 (Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

151. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

152. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050759 (Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

153. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_AP022652 (Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

154. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP024136 (Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

155. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_LT985315 (Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

156. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MN436006 (Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

157. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MN436007 (Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

158. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

159. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP045839 (Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

160. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

161. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MG825381 (Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

162. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT197111 (Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

163. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

164. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

165. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to MT219821 (Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

166. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MG288677 (Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

167. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP030195 (Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence) position: , mismatch: 1, identity: 0.971

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtgattttcatgaaaggtggatggctgcgcac	Protospacer
****.*****************************

168. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP033353 (Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

169. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP050780 (Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

170. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP022061 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

171. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to CP048927 (Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

172. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

173. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP028313 (Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

174. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP018662 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

175. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to CP049987 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

176. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to CP049982 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

177. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NC_010421 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

178. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_MK625201 (Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

179. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP023476 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

180. spacer 1.1|5878|34|NZ_CP050748|CRISPRCasFinder matches to NZ_CP044292 (Escherichia coli strain P43A plasmid pP43A-1, complete sequence) position: , mismatch: 4, identity: 0.882

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgttcga	Protospacer
*****************************. *.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP050745

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050745_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050745_1

678225-678325

Orphan

Consensus_repeat	Method
GCTTCAGTGGCGAACGTCGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050745_1

>merge|NZ_CP050745|1|678225-678325|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAAGGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTCGCTTCAGCGGCGAACGTCGTGAA

>NZ_CP050745|1|1|678225-678325|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAA	GGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTC
GCTTCAGCGGCGAACGTCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050745.1\|WP_000207654.1\|664303_665647_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP050745.1\|WP_000802069.1\|675432_676317_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NZ_CP050745.1\|WP_000089674.1\|671581_672526_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235333
NZ_CP050745.1\|WP_001670767.1\|673187_675323_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP050745.1\|WP_001031038.1\|666754_668257_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP050745.1\|WP_000130443.1\|681229_682237_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP050745.1\|WP_000133064.1\|668281_670960_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP050745.1\|WP_000105461.1\|666274_666727_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP050745.1\|WP_000059465.1\|672676_672946_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP050745.1\|WP_000928379.1\|685521_685839_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NZ_CP050745.1\|WP_000380404.1\|685876_686320_+\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP050745.1\|WP_000908562.1\|685031_685535_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP050745.1\|WP_010723222.1\|676422_676503_+\|protein-YrbN	unknown	unknown	gnl\|CDD\|380282
NZ_CP050745.1\|WP_000421309.1\|683301_684297_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP050745.1\|WP_000884721.1\|684513_685038_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP050745.1\|WP_000532745.1\|680532_681252_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP050745.1\|WP_001294027.1\|679843_680374_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050745.1\|WP_014343907.1\|682414_683311_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP050745.1\|WP_001040199.1\|671180_671582_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP050745.1\|WP_000224386.1\|678538_679783_+\|tryptophan-permease	unknown	unknown	gnl\|CDD\|182492

Protein	Function_ID	Function_description	E-value
NZ_CP050745.1\|WP_000207654.1\|664303_665647_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP050745.1\|WP_000802069.1\|675432_676317_+\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	0
NZ_CP050745.1\|WP_000089674.1\|671581_672526_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235333	PRK05033, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP050745.1\|WP_001670767.1\|673187_675323_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP050745.1\|WP_001031038.1\|666754_668257_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP050745.1\|WP_000130443.1\|681229_682237_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP050745.1\|WP_000133064.1\|668281_670960_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP050745.1\|WP_000105461.1\|666274_666727_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	4.39218e-79
NZ_CP050745.1\|WP_000059465.1\|672676_672946_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	7.70279e-54
NZ_CP050745.1\|WP_000928379.1\|685521_685839_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	4.3214e-44
NZ_CP050745.1\|WP_000380404.1\|685876_686320_+\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	1.36854e-99
NZ_CP050745.1\|WP_000908562.1\|685031_685535_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	7.2703e-63
NZ_CP050745.1\|WP_010723222.1\|676422_676503_+\|protein-YrbN	gnl\|CDD\|380282	NF033440, small_YrbN, protein YrbN. YrbN, a small protein of only 26 amino acids, is found in at least these genera: Escherichia, Salmonella, Enterobacter, Klebsiella, and Yersinia. It is known to be expressed in E. coli.	1.66225e-08
NZ_CP050745.1\|WP_000421309.1\|683301_684297_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	3.77757e-116
NZ_CP050745.1\|WP_000884721.1\|684513_685038_+\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	1.82299e-84
NZ_CP050745.1\|WP_000532745.1\|680532_681252_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.17265e-108
NZ_CP050745.1\|WP_014343907.1\|682414_683311_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP050745.1\|WP_001040199.1\|671180_671582_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	9.9646e-53
NZ_CP050745.1\|WP_000224386.1\|678538_679783_+\|tryptophan-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	0

>NZ_CP050745.1|WP_010723222.1|676422_676503_+|protein-YrbN
MKIADQFHDELCRLAAINFEAHVLHG
>NZ_CP050745.1|WP_000802069.1|675432_676317_+|lipoprotein-NlpI
MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPYRSLWLYLVEQKLNEKQAKEALKARFEKSDKEQWGWNIVEFYLGDISEATLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ
>NZ_CP050745.1|WP_001670767.1|673187_675323_+|polyribonucleotide-nucleotidyltransferase
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
>NZ_CP050745.1|WP_000059465.1|672676_672946_+|30S-ribosomal-protein-S15
MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR
>NZ_CP050745.1|WP_000089674.1|671581_672526_+|tRNA-pseudouridine(55)-synthase-TruB
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQLLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDEGRVAPRRLVVEYPA
>NZ_CP050745.1|WP_001040199.1|671180_671582_+|30S-ribosome-binding-factor-RbfA
MAKEFGRPQRVAQEMQKEIAIILQREIKDPRLGMMTTVSGVEMSRDLAYAKVFVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED
>NZ_CP050745.1|WP_000133064.1|668281_670960_+|translation-initiation-factor-IF-2
MTDVTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVSNQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA
>NZ_CP050745.1|WP_001031038.1|666754_668257_+|transcription-termination/antitermination-protein-NusA
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMAGNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMAFKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA
>NZ_CP050745.1|WP_000105461.1|666274_666727_+|ribosome-maturation-factor-RimP
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>NZ_CP050745.1|WP_000207654.1|664303_665647_-|argininosuccinate-synthase
MTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDESVKIPAEVVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHSHGRQLGKLLYQGRWFDSQALMLRDGLQRWVASQITGEVTLELRRGNDYSILNTVSDNLTYKAERLTMEKGESVFSPDDRIGQLTMRNLDITDTREKLFGYAKAGLLTASSATGLPQVENLENKGK
>NZ_CP050745.1|WP_000224386.1|678538_679783_+|tryptophan-permease
MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFAFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESHASYTPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALALYSVWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRFKTALLTFLPPMIGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKSRERFGSPKFRVWGGKPMIVLILLFGVGNALVHILSSFNLLPVYQ
>NZ_CP050745.1|WP_001294027.1|679843_680374_-|hypothetical-protein
MSEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCNSGESEKNIYAEHINFNKETQIVTMDHIFLSESYEIFMPLMACVRGIEKFITPGENNFALIYYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDEHGEALAEELYNKQGFI
>NZ_CP050745.1|WP_000532745.1|680532_681252_+|murein-L,D-transpeptidase
MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTTLP
>NZ_CP050745.1|WP_000130443.1|681229_682237_-|LLM-class-flavin-dependent-oxidoreductase
MTDKTIPFSVLDLAPIPEGSSAKEAFTHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQSTMRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEQIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRTQFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIENMETFRSPSEQYGVQQALSMSLVGDKAKVRHGLESILRETQADEIMVNGQIFDHQARLHSFDLAMDVKEELLG
>NZ_CP050745.1|WP_014343907.1|682414_683311_-|U32-family-peptidase
MAVRGAMKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVVLSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGLVDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
>NZ_CP050745.1|WP_000421309.1|683301_684297_-|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKAAPQNFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP050745.1|WP_000884721.1|684513_685038_+|SCP2-domain-containing-protein
MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC
>NZ_CP050745.1|WP_000908562.1|685031_685535_+|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQVHRLAEDALEGVTGLVEYHDHFNRF
>NZ_CP050745.1|WP_000928379.1|685521_685839_-|GIY-YIG-nuclease-family-protein
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
>NZ_CP050745.1|WP_000380404.1|685876_686320_+|YhbP-family-protein
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA

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Crispr_ID: NZ_CP050745_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050745_2

1028172-1030153

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

32 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP050745_2

>merge|NZ_CP050745|2|1028172-1030153|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGCAGAGTTGTATCTTACCCTGTTTACGTTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTATCCCAATATATTTCGCTATCAGTTACATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGACTGTTTATACCGGATTCCATGCGTTTTCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAATTACTGGCTAACGACGAACTGACAGTTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGACCTAAACCTGAAAAAACCGACGCCCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTCATTAAATAACTATATAACCCCCGGACTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCCAGAACCGTTTGACTTACTGTGGCCATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCTTTGGTGAAGATTTCTGATTTGGTCATTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGATCGGGTGGTGCCGGTGGGCCATGTGGCGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGCGGTTGAGTAACTCCTCGTCCACGTCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCCAGCGCTCGAATTTATTTGAGGCCACCACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGAGGTCAATAAAAAATGGTGTGGCTTTACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGCATCAGCGCCGATCCGTTCATAGTGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAACAGGAACAGGAAAAAAAAGATTTGTCCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGATCCTCAACGGTCAGGCTGTTTAGTTCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGAGGATGGAATATTTCCGAGGCTGGCGATTGTGTTCCCCGCGCTAGCGGGGATAAACCGATGCCGGAACGCTGATGGCGTTTGACATGAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTATTTCTGTGGCTGGGGTTTCGATTCGATGTGTTCCCCGCGCCAGCGGGGATAAACCGTGACGCTGGTCTATACCGGCAACGAACGCGACGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGACGGTGACGTCAGTGCCGAAGGCGAAATAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCTTACGCTATTTACGACGTTATTGAGCAGTGTTCCCCGCGCCAGCAGGGATAAATCGAAACGAAAGAGGCTATGCGGTTGTTTATCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCGATAGCGACGCTTCTGTAGTCACTGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGCGTGTTCCCCGCGCCAGCGGGGATAAGCCGCGTCACTTTCTGACATTTTATTCAGTTCGTTAGTGTTCCCCGTGCCAGCGGGGATAAACCGTCATTTCTGGACGGGGCTGTGTGACGAATACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGTCCAATTAACCCAAACTTTGCGCGCTTAATATGTTCCCCGCGCTAGCGGGGATAAACCGGGATATGTGAAGTTCAGGTAGCCCATTACGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATCGAGAGTGCGAAGAGGCAGAACGGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTTATGCGCAAAAATTAATTCATATTATAGTGTTCCCCGCGCCAGCAGGGATAAACCGGACGAGTTCTGGAAATGGTTAGCTGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTCATCGGCAGCGTCACGCAATATGAAGATGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP050745|2|1|1028172-1030092|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCAGAGTTGTATCTTACCCTGTTTACGTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATCCCAATATATTTCGCTATCAGTTACATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTGTTTATACCGGATTCCATGCGTTTTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTACTGGCTAACGACGAACTGACAGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGACCTAAACCTGAAAAAACCGACGCCCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCATTAAATAACTATATAACCCCCGGACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAGAACCGTTTGACTTACTGTGGCCATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTTTGGTGAAGATTTCTGATTTGGTCATTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCCTCAACGGTCAGGCTGTTTAGTTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAGGATGGAATATTTCCGAGGCTGGCGATT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATGCCGGAACGCTGATGGCGTTTGACATGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGCTGGTCTATACCGGCAACGAACGCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGGTGACGTCAGTGCCGAAGGCGAAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCTTACGCTATTTACGACGTTATTGAGCA
GTGTTCCCCGCGCCAGCAGGGATAAATCG	AAACGAAAGAGGCTATGCGGTTGTTTATCGGTGTG
TTCCCCGCGCCAGCGGGGATAAACCGCCC	CGATAGCGACGCTTCTGTAGTCACTGGCAGTG
TTCCCCGCGCCAGCGGGGATAAACCGGTG	AGTTCGGTTTTAATTTCGTCGCTAAGCTGCGTG
TTCCCCGCGCCAGCGGGGATAAGCCGCGT	CACTTTCTGACATTTTATTCAGTTCGTTAGTG
TTCCCCGTGCCAGCGGGGATAAACCGTCA	TTTCTGGACGGGGCTGTGTGACGAATACGGTG
TTCCCCGCGCCAGCGGGGATAAACCGTGT	CCAATTAACCCAAACTTTGCGCGCTTAATATG
TTCCCCGCGCTAGCGGGGATAAACCGGGA	TATGTGAAGTTCAGGTAGCCCATTACGCAGTG
TTCCCCGCGCCAGCGGGGATAAACCGTTG	ATCGAGAGTGCGAAGAGGCAGAACGGGCAGTG
TTCCCCGCGCCAGCGGGGATAAACCGCAG	GTTATGCGCAAAAATTAATTCATATTATAGTG
TTCCCCGCGCCAGCAGGGATAAACCGGAC	GAGTTCTGGAAATGGTTAGCTGATAAAGAGTG
TTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP050745|2|2|1028172-1030153|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCAGAGTTGTATCTTACCCTGTTTACGTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATCCCAATATATTTCGCTATCAGTTACATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTGTTTATACCGGATTCCATGCGTTTTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTACTGGCTAACGACGAACTGACAGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGACCTAAACCTGAAAAAACCGACGCCCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCATTAAATAACTATATAACCCCCGGACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAGAACCGTTTGACTTACTGTGGCCATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTTTGGTGAAGATTTCTGATTTGGTCATTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCCTCAACGGTCAGGCTGTTTAGTTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAGGATGGAATATTTCCGAGGCTGGCGATT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATGCCGGAACGCTGATGGCGTTTGACATGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGCTGGTCTATACCGGCAACGAACGCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGGTGACGTCAGTGCCGAAGGCGAAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCTTACGCTATTTACGACGTTATTGAGCA
GTGTTCCCCGCGCCAGCAGGGATAAATCG	AAACGAAAGAGGCTATGCGGTTGTTTATCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCGATAGCGACGCTTCTGTAGTCACTGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	CGTCACTTTCTGACATTTTATTCAGTTCGTTA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCATTTCTGGACGGGGCTGTGTGACGAATACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
ATGTTCCCCGCGCTAGCGGGGATAAACCG	GGATATGTGAAGTTCAGGTAGCCCATTACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP050745|2|1|1028172-1030153|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCAGAGTTGTATCTTACCCTGTTTACGTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATCCCAATATATTTCGCTATCAGTTACATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTGTTTATACCGGATTCCATGCGTTTTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTACTGGCTAACGACGAACTGACAGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGACCTAAACCTGAAAAAACCGACGCCCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCATTAAATAACTATATAACCCCCGGACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAGAACCGTTTGACTTACTGTGGCCATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTTTGGTGAAGATTTCTGATTTGGTCATTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCCTCAACGGTCAGGCTGTTTAGTTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAGGATGGAATATTTCCGAGGCTGGCGATT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATGCCGGAACGCTGATGGCGTTTGACATGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGCTGGTCTATACCGGCAACGAACGCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGGTGACGTCAGTGCCGAAGGCGAAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCTTACGCTATTTACGACGTTATTGAGCA
GTGTTCCCCGCGCCAGCAGGGATAAATCG	AAACGAAAGAGGCTATGCGGTTGTTTATCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCGATAGCGACGCTTCTGTAGTCACTGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	CGTCACTTTCTGACATTTTATTCAGTTCGTTA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCATTTCTGGACGGGGCTGTGTGACGAATACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
ATGTTCCCCGCGCTAGCGGGGATAAACCG	GGATATGTGAAGTTCAGGTAGCCCATTACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050745.1\|WP_000210927.1\|1031921_1033721_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP050745.1\|WP_000206415.1\|1042530_1043589_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP050745.1\|WP_001145543.1\|1036330_1037284_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP050745.1\|WP_001290660.1\|1033720_1035433_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP050745.1\|WP_000029738.1\|1037728_1040392_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP050745.1\|WP_000368584.1\|1040403_1041960_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP050745.1\|WP_000706479.1\|1013970_1015113_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP050745.1\|WP_000117946.1\|1041956_1042517_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP050745.1\|WP_000108313.1\|1031135_1031498_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP050745.1\|WP_000046849.1\|1017970_1019266_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP050745.1\|WP_000226838.1\|1019317_1021552_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP050745.1\|WP_000480218.1\|1021635_1021992_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP050745.1\|WP_000080404.1\|1035508_1036243_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP050745.1\|WP_001532579.1\|1021957_1022254_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP050745.1\|WP_000210449.1\|1023021_1023822_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP050745.1\|WP_000186400.1\|1015156_1017913_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP050745.1\|WP_001208014.1\|1030250_1031048_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP050745.1\|WP_000036734.1\|1025769_1027068_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP050745.1\|WP_000210863.1\|1024049_1025687_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP050745.1\|WP_001199961.1\|1027203_1027875_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126

Protein	Function_ID	Function_description	E-value
NZ_CP050745.1\|WP_000210927.1\|1031921_1033721_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP050745.1\|WP_000206415.1\|1042530_1043589_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP050745.1\|WP_001145543.1\|1036330_1037284_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP050745.1\|WP_001290660.1\|1033720_1035433_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP050745.1\|WP_000029738.1\|1037728_1040392_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP050745.1\|WP_000368584.1\|1040403_1041960_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP050745.1\|WP_000706479.1\|1013970_1015113_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP050745.1\|WP_000117946.1\|1041956_1042517_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP050745.1\|WP_000108313.1\|1031135_1031498_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP050745.1\|WP_000046849.1\|1017970_1019266_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP050745.1\|WP_000226838.1\|1019317_1021552_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP050745.1\|WP_000480218.1\|1021635_1021992_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP050745.1\|WP_000080404.1\|1035508_1036243_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP050745.1\|WP_001532579.1\|1021957_1022254_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.63617e-13
NZ_CP050745.1\|WP_000210449.1\|1023021_1023822_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
NZ_CP050745.1\|WP_000186400.1\|1015156_1017913_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP050745.1\|WP_001208014.1\|1030250_1031048_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	2.10968e-101
NZ_CP050745.1\|WP_000036734.1\|1025769_1027068_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP050745.1\|WP_000210863.1\|1024049_1025687_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP050745.1\|WP_001199961.1\|1027203_1027875_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155

>NZ_CP050745.1|WP_001199961.1|1027203_1027875_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP050745.1|WP_000036734.1|1025769_1027068_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP050745.1|WP_000210863.1|1024049_1025687_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP050745.1|WP_000210449.1|1023021_1023822_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP050745.1|WP_001532579.1|1021957_1022254_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>NZ_CP050745.1|WP_000480218.1|1021635_1021992_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP050745.1|WP_000226838.1|1019317_1021552_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP050745.1|WP_000046849.1|1017970_1019266_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP050745.1|WP_000186400.1|1015156_1017913_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP050745.1|WP_000706479.1|1013970_1015113_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>NZ_CP050745.1|WP_001208014.1|1030250_1031048_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKVRPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDSSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRSYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP050745.1|WP_000108313.1|1031135_1031498_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP050745.1|WP_000210927.1|1031921_1033721_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP050745.1|WP_001290660.1|1033720_1035433_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP050745.1|WP_000080404.1|1035508_1036243_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP050745.1|WP_001145543.1|1036330_1037284_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP050745.1|WP_000029738.1|1037728_1040392_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP050745.1|WP_000368584.1|1040403_1041960_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP050745.1|WP_000117946.1|1041956_1042517_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP050745.1|WP_000206415.1|1042530_1043589_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA

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Crispr_ID: NZ_CP050745_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050745_3

1046285-1047169

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR

14 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP050745_3

>merge|NZ_CP050745|3|1046285-1047169|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGAGCAACGACAGTAAATAATTTTTCGTGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGAACCGCTGGCGGGCTGATTGGTCTGCAACCACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAACCAGGCTGGATCGTAACTCCTATCCCCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTGCGGATTATCGTTAAGACTGAAGGAAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCTGACGCACTGGATCAACCTGACGCAACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCAGGGCGATATTGTTGTTGGTGAATGGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCGCGGAAAATTTCGCATTGACGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTACGTGTTTATTCATCTGTTGCATTAGATTCGTGTTCCCCGCGCCAGCGGGGATAAACCTGAGGCGTACAGGCTGTTAGATGAGAAATTACCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGATTATCTGTATTTTACGGAAGTGGGCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCGTTCATCAGGCACTACCGGCACTTTCTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGATATTCGCCGCTTTCCATTTACCGAACGTAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCCACGTTCGGCGATGTTGGCCCCATCGGTCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACGGTAGTGTTTTAAAACCGTTTCGAGGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGA

>NZ_CP050745|3|2|1046285-1046496|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAGCAACGACAGTAAATAATTTTTCGTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCGCTGGCGGGCTGATTGGTCTGCAACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACCAGGCTGGATCGTAACTCCTATCCCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTGCGGATTATCGTTAAGACTGAAGGAAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCTGACGCACTGGATCAACCTGACGCAACGGTGTTCCCCGCGCCAGCGGGGATAAACC	GTTGCAGGGCGATATTGTTGTTGGTGAATGGGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGTCGCGGAAAATTTCGCATTGACGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCACGTTCGGCGATGTTGGCCCCATCGGTCCA


>NZ_CP050745|3|3|1046285-1047169|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAGCAACGACAGTAAATAATTTTTCGTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCGCTGGCGGGCTGATTGGTCTGCAACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACCAGGCTGGATCGTAACTCCTATCCCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCTGACGCACTGGATCAACCTGACGCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCAGGGCGATATTGTTGTTGGTGAATGGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGCGGAAAATTTCGCATTGACGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCGA

>NZ_CP050745|3|2|1046285-1047168|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAGCAACGACAGTAAATAATTTTTCGTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCGCTGGCGGGCTGATTGGTCTGCAACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACCAGGCTGGATCGTAACTCCTATCCCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCTGACGCACTGGATCAACCTGACGCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCAGGGCGATATTGTTGTTGGTGAATGGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGCGGAAAATTTCGCATTGACGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP050745|3|3|1046590-1047105|PILER-CR
	TGAGCAACGACAGTAAATAATTTTTCGTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCGCTGGCGGGCTGATTGGTCTGCAACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACCAGGCTGGATCGTAACTCCTATCCCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTGCGGATTATCGTTAAGACTGAAGGAAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCTGACGCACTGGATCAACCTGACGCAACGGTGTTCCCCGCGCCAGCGGGGATAAACC	GTTGCAGGGCGATATTGTTGTTGGTGAATGGGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGTCGCGGAAAATTTCGCATTGACGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCACGTTCGGCGATGTTGGCCCCATCGGTCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050745.1\|WP_001145543.1\|1036330_1037284_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP050745.1\|WP_000085114.1\|1043599_1044346_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP050745.1\|WP_001219245.1\|1053502_1053982_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP050745.1\|WP_000368584.1\|1040403_1041960_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP050745.1\|WP_001537530.1\|1051948_1052272_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP050745.1\|WP_000117946.1\|1041956_1042517_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP050745.1\|WP_000490481.1\|1047651_1048698_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP050745.1\|WP_001092263.1\|1049866_1051306_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP050745.1\|WP_000029738.1\|1037728_1040392_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP050745.1\|WP_001173663.1\|1051292_1051898_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP050745.1\|WP_000206415.1\|1042530_1043589_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP050745.1\|WP_001518648.1\|1045894_1046188_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP050745.1\|WP_000144832.1\|1044974_1045895_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP050745.1\|WP_000372384.1\|1048948_1049857_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP050745.1\|WP_000080404.1\|1035508_1036243_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP050745.1\|WP_000741650.1\|1052792_1053503_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP050745.1\|WP_000281486.1\|1044327_1044978_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP050745.1\|WP_000134246.1\|1053978_1055028_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP050745.1\|WP_001221538.1\|1055008_1055770_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP050745.1\|WP_000517480.1\|1052462_1052774_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156

Protein	Function_ID	Function_description	E-value
NZ_CP050745.1\|WP_001145543.1\|1036330_1037284_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP050745.1\|WP_000085114.1\|1043599_1044346_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP050745.1\|WP_001219245.1\|1053502_1053982_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
NZ_CP050745.1\|WP_000368584.1\|1040403_1041960_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP050745.1\|WP_001537530.1\|1051948_1052272_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
NZ_CP050745.1\|WP_000117946.1\|1041956_1042517_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP050745.1\|WP_000490481.1\|1047651_1048698_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP050745.1\|WP_001092263.1\|1049866_1051306_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP050745.1\|WP_000029738.1\|1037728_1040392_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP050745.1\|WP_001173663.1\|1051292_1051898_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP050745.1\|WP_000206415.1\|1042530_1043589_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP050745.1\|WP_001518648.1\|1045894_1046188_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP050745.1\|WP_000144832.1\|1044974_1045895_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NZ_CP050745.1\|WP_000372384.1\|1048948_1049857_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP050745.1\|WP_000080404.1\|1035508_1036243_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP050745.1\|WP_000741650.1\|1052792_1053503_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
NZ_CP050745.1\|WP_000281486.1\|1044327_1044978_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP050745.1\|WP_000134246.1\|1053978_1055028_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP050745.1\|WP_001221538.1\|1055008_1055770_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP050745.1\|WP_000517480.1\|1052462_1052774_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64

>NZ_CP050745.1|WP_001518648.1|1045894_1046188_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP050745.1|WP_000144832.1|1044974_1045895_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP050745.1|WP_000281486.1|1044327_1044978_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP050745.1|WP_000085114.1|1043599_1044346_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP050745.1|WP_000206415.1|1042530_1043589_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP050745.1|WP_000117946.1|1041956_1042517_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP050745.1|WP_000368584.1|1040403_1041960_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP050745.1|WP_000029738.1|1037728_1040392_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP050745.1|WP_001145543.1|1036330_1037284_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP050745.1|WP_000080404.1|1035508_1036243_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP050745.1|WP_000490481.1|1047651_1048698_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP050745.1|WP_000372384.1|1048948_1049857_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP050745.1|WP_001092263.1|1049866_1051306_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP050745.1|WP_001173663.1|1051292_1051898_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP050745.1|WP_001537530.1|1051948_1052272_+|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP050745.1|WP_000517480.1|1052462_1052774_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP050745.1|WP_000741650.1|1052792_1053503_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP050745.1|WP_001219245.1|1053502_1053982_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP050745.1|WP_000134246.1|1053978_1055028_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP050745.1|WP_001221538.1|1055008_1055770_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: NZ_CP050745_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050745_4

1047243-1047637

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

6 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP050745_4

>merge|NZ_CP050745|4|1047243-1047637|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAGCCGTTTCCGCTAAATACCCCCGCAGTGATTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCTTGAATATGATTGCGGGTATATGTGGATAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTGGTTATAACATCGCAGCAAAATCAAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGACGAGGTGCGAGCGATGGTATCAAGGCCTAGTGTTTCCCGCGCCAGCGGGGATAAACCGGGTTAACCAGGGGTTTTTCCCCACTATTTCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAATGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP050745|4|4|1047243-1047576|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTTTCCGCTAAATACCCCCGCAGTGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCTTGAATATGATTGCGGGTATATGTGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGGTTATAACATCGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGAGGTGCGAGCGATGGTATCAAGGCCTA
GTGTTTCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP050745|4|4|1047243-1047637|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTTTCCGCTAAATACCCCCGCAGTGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCTTGAATATGATTGCGGGTATATGTGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGGTTATAACATCGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGAGGTGCGAGCGATGGTATCAAGGCCTA
GTGTTTCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP050745|4|3|1047243-1047637|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTTTCCGCTAAATACCCCCGCAGTGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCTTGAATATGATTGCGGGTATATGTGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGGTTATAACATCGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGAGGTGCGAGCGATGGTATCAAGGCCTA
GTGTTTCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050745.1\|WP_001145543.1\|1036330_1037284_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP050745.1\|WP_000085114.1\|1043599_1044346_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP050745.1\|WP_001219245.1\|1053502_1053982_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP050745.1\|WP_000368584.1\|1040403_1041960_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP050745.1\|WP_001537530.1\|1051948_1052272_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP050745.1\|WP_000117946.1\|1041956_1042517_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP050745.1\|WP_000490481.1\|1047651_1048698_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP050745.1\|WP_001092263.1\|1049866_1051306_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP050745.1\|WP_000029738.1\|1037728_1040392_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP050745.1\|WP_001173663.1\|1051292_1051898_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP050745.1\|WP_000206415.1\|1042530_1043589_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP050745.1\|WP_001518648.1\|1045894_1046188_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP050745.1\|WP_000144832.1\|1044974_1045895_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP050745.1\|WP_000372384.1\|1048948_1049857_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP050745.1\|WP_000080404.1\|1035508_1036243_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP050745.1\|WP_000741650.1\|1052792_1053503_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP050745.1\|WP_000281486.1\|1044327_1044978_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP050745.1\|WP_000134246.1\|1053978_1055028_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP050745.1\|WP_001221538.1\|1055008_1055770_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP050745.1\|WP_000517480.1\|1052462_1052774_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156

Protein	Function_ID	Function_description	E-value
NZ_CP050745.1\|WP_001145543.1\|1036330_1037284_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP050745.1\|WP_000085114.1\|1043599_1044346_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP050745.1\|WP_001219245.1\|1053502_1053982_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
NZ_CP050745.1\|WP_000368584.1\|1040403_1041960_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP050745.1\|WP_001537530.1\|1051948_1052272_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
NZ_CP050745.1\|WP_000117946.1\|1041956_1042517_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP050745.1\|WP_000490481.1\|1047651_1048698_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP050745.1\|WP_001092263.1\|1049866_1051306_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP050745.1\|WP_000029738.1\|1037728_1040392_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP050745.1\|WP_001173663.1\|1051292_1051898_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP050745.1\|WP_000206415.1\|1042530_1043589_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP050745.1\|WP_001518648.1\|1045894_1046188_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP050745.1\|WP_000144832.1\|1044974_1045895_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NZ_CP050745.1\|WP_000372384.1\|1048948_1049857_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP050745.1\|WP_000080404.1\|1035508_1036243_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP050745.1\|WP_000741650.1\|1052792_1053503_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
NZ_CP050745.1\|WP_000281486.1\|1044327_1044978_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP050745.1\|WP_000134246.1\|1053978_1055028_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP050745.1\|WP_001221538.1\|1055008_1055770_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP050745.1\|WP_000517480.1\|1052462_1052774_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64

>NZ_CP050745.1|WP_001518648.1|1045894_1046188_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP050745.1|WP_000144832.1|1044974_1045895_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP050745.1|WP_000281486.1|1044327_1044978_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP050745.1|WP_000085114.1|1043599_1044346_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP050745.1|WP_000206415.1|1042530_1043589_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP050745.1|WP_000117946.1|1041956_1042517_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP050745.1|WP_000368584.1|1040403_1041960_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP050745.1|WP_000029738.1|1037728_1040392_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP050745.1|WP_001145543.1|1036330_1037284_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP050745.1|WP_000080404.1|1035508_1036243_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP050745.1|WP_000490481.1|1047651_1048698_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP050745.1|WP_000372384.1|1048948_1049857_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP050745.1|WP_001092263.1|1049866_1051306_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP050745.1|WP_001173663.1|1051292_1051898_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP050745.1|WP_001537530.1|1051948_1052272_+|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP050745.1|WP_000517480.1|1052462_1052774_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP050745.1|WP_000741650.1|1052792_1053503_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP050745.1|WP_001219245.1|1053502_1053982_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP050745.1|WP_000134246.1|1053978_1055028_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP050745.1|WP_001221538.1|1055008_1055770_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: NZ_CP050745_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050745_5

1386604-1386713

Orphan

Consensus_repeat	Method
TTAAAAAAAGGTGGTACAGGGTGGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050745_5

>merge|NZ_CP050745|5|1386604-1386713|CRISPRCasFinder
TTAAAAAAAGGTGGTACAGGGTGGGACAAGTGGTACACGCAGAGCTGGCGAGGGTTACAGCGTCCCACCTTAGAGAATTTGATTAAAAAAAAGTGGTACAGGGTGGGACA

>NZ_CP050745|5|5|1386604-1386713|CRISPRCasFinder
TTAAAAAAAGGTGGTACAGGGTGGGACA	AGTGGTACACGCAGAGCTGGCGAGGGTTACAGCGTCCCACCTTAGAGAATTTGA
TTAAAAAAAAGTGGTACAGGGTGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050745.1\|WP_001033832.1\|1392116_1393130_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP050745.1\|WP_001098984.1\|1391125_1392106_+\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NZ_CP050745.1\|WP_000973738.1\|1390754_1391129_+\|PTS-glucitol/sorbitol-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|226254
NZ_CP050745.1\|WP_000052560.1\|1377194_1377827_+\|phage-repressor-protein	unknown	unknown	gnl\|CDD\|374550
NZ_CP050745.1\|WP_000776032.1\|1394700_1395336_-\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|132172
NZ_CP050745.1\|WP_010989064.1\|1388416_1389235_+\|DUF4435-domain-containing-protein	unknown	unknown	gnl\|CDD\|373095
NZ_CP050745.1\|WP_001520307.1\|1384516_1386586_+\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NZ_CP050745.1\|WP_001161781.1\|1382987_1383815_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050745.1\|WP_000480483.1\|1390236_1390758_+\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
NZ_CP050745.1\|WP_001520831.1\|1387088_1388372_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226459
NZ_CP050745.1\|WP_000248794.1\|1381459_1382653_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376935
NZ_CP050745.1\|WP_000460862.1\|1376293_1376803_-\|phage-regulatory-CII-family-protein	unknown	unknown	gnl\|CDD\|369127
NZ_CP050745.1\|WP_000957775.1\|1376052_1376286_-\|DUF2724-domain-containing-protein	unknown	unknown	gnl\|CDD\|371288
NZ_CP050745.1\|WP_000889012.1\|1393424_1394627_+\|DUF3883-domain-containing-protein	unknown	unknown	gnl\|CDD\|379021
NZ_CP050745.1\|WP_001536726.1\|1377830_1378856_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|222904
NZ_CP050745.1\|WP_010989063.1\|1380476_1381070_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050745.1\|WP_000701821.1\|1384265_1384481_+\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP050745.1\|WP_000749979.1\|1389839_1390124_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225957
NZ_CP050745.1\|WP_000102104.1\|1376838_1377078_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050745.1\|WP_010989065.1\|1389388_1389745_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
NZ_CP050745.1\|WP_001098984.1\|1391125_1392106_+\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.31232e-179
NZ_CP050745.1\|WP_000973738.1\|1390754_1391129_+\|PTS-glucitol/sorbitol-transporter-subunit-IIA	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	5.89598e-59
NZ_CP050745.1\|WP_000052560.1\|1377194_1377827_+\|phage-repressor-protein	gnl\|CDD\|374550	pfam16452, Phage_CI_C, Bacteriophage CI repressor C-terminal domain. The C-terminal domain of the CI repressor functions in oligomer formation.	1.49283e-43
NZ_CP050745.1\|WP_000776032.1\|1394700_1395336_-\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|132172	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.	4.14833e-98
NZ_CP050745.1\|WP_010989064.1\|1388416_1389235_+\|DUF4435-domain-containing-protein	gnl\|CDD\|373095	pfam14491, DUF4435, Protein of unknown function (DUF4435). This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 285 and 362 amino acids in length. This domain is sometimes associated with AAA domains.	2.33424e-50
NZ_CP050745.1\|WP_001520307.1\|1384516_1386586_+\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
NZ_CP050745.1\|WP_001033832.1\|1392116_1393130_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.77409e-67
NZ_CP050745.1\|WP_000480483.1\|1390236_1390758_+\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	2.29561e-79
NZ_CP050745.1\|WP_001520831.1\|1387088_1388372_+\|AAA-family-ATPase	gnl\|CDD\|226459	COG3950, COG3950, Predicted ATP-binding protein involved in virulence [General function prediction only].	0
NZ_CP050745.1\|WP_000248794.1\|1381459_1382653_+\|hypothetical-protein	gnl\|CDD\|376935	pfam02810, SEC-C, SEC-C motif. The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some SWI2 ATPases and also solo in several proteins. The motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain.	3.20348e-07
NZ_CP050745.1\|WP_000460862.1\|1376293_1376803_-\|phage-regulatory-CII-family-protein	gnl\|CDD\|369127	pfam06892, Phage_CP76, Phage regulatory protein CII (CP76). This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny.	4.55954e-86
NZ_CP050745.1\|WP_000957775.1\|1376052_1376286_-\|DUF2724-domain-containing-protein	gnl\|CDD\|371288	pfam10893, DUF2724, Protein of unknown function (DUF2724). This is a family of proteins with unknown function.	1.20897e-15
NZ_CP050745.1\|WP_000889012.1\|1393424_1394627_+\|DUF3883-domain-containing-protein	gnl\|CDD\|379021	pfam13020, DUF3883, Domain of unknown function (DUF3883). This is a domain is uncharacterized. It is found on restriction endonucleases.	6.01438e-16
NZ_CP050745.1\|WP_001536726.1\|1377830_1378856_+\|site-specific-integrase	gnl\|CDD\|222904	PHA02601, int, integrase; Provisional.	0
NZ_CP050745.1\|WP_000701821.1\|1384265_1384481_+\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.37497e-21
NZ_CP050745.1\|WP_000749979.1\|1389839_1390124_+\|transcriptional-regulator	gnl\|CDD\|225957	COG3423, Nlp, Predicted transcriptional regulator [Transcription].	5.31271e-38
NZ_CP050745.1\|WP_010989065.1\|1389388_1389745_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.55924e-09

>NZ_CP050745.1|WP_001520307.1|1384516_1386586_+|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRVWRKDPDREDDVPPMVLGPNELADLSNLTIIRPDTLYVRVLRTGDISEEDLLKIAVKLAHAGVQMARLMSPDGELLENWTGQLERLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDGSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTNISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPDGDNVILQGSHYLTGGFAQAGTLAEWQEQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERIYAGMDVRMVQIPSDTGQHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQNALMPDNAGNQVQRIVARFALLAAAGEIATLHGITGWQKGTAYEAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMAGFRRVEKDPLTGEEHTLFFILPEGWREICRGFSPARAARLCQEAECLQPGSDGKYQSQVRLPEIGKTRVYRLTSRILSI
>NZ_CP050745.1|WP_000701821.1|1384265_1384481_+|AlpA-family-transcriptional-regulator
MKIRADSNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRTVIR
>NZ_CP050745.1|WP_001161781.1|1382987_1383815_-|hypothetical-protein
MQGLTMDDISLSIARNMFHLQVYESDGVRFEDLFSKIMYYKSPDFQQVKPYGNIGDRKNDGFIKGQGVYYQVYAPEDASNNVLAAVNKIKDDFEGLRDYWHDICPIKKYYFVLNDKYKGSLPQLHKELIVLQSDFNLIDTGVIVAKDLERELFNLPDDMIRSVVGHLPDIDHEEYMFVSGFTCFISAWINFEKIARHKVFSAKQPNRPLFIGKVVNALVKNKIISRQDATFIKKITEVRNSLVHGVSMLVPKKNEIDMLIFITEKIKPAGVCRLD
>NZ_CP050745.1|WP_000248794.1|1381459_1382653_+|hypothetical-protein
MVNYPYFSVNVLSGSINFVENDKVKLGRNDKCWCKSGLKYKKCHLDRDREMPVSKAEALKFSKSNSQRKACYAPASMHEDCDKRIVQAHTLSKSSSLKAIADSSNHVMGVVMNLPSLIKNNGRWVPEKIGINQASTFTGFCAVHDRILFSCLENEKFTGTDEQCFALMFRSLSKEIYAKEGGRRSSDFAKNADKGKLQAEQVYIQEFVSLHQSGLNAAITELNNLKTSLDRILLNRQFSEIESVVFTFSEPLPIAVSSILSPERDFDGTKIQDLNDLTVSAEQVCFNAFSSEGKGYVVFSWLGTSAIIRRFVRSLIKVQTDRIFNTLLYFFFTKAENTYSSPEWWDSLSDKQRENIGNMIMSGVDFFDNSTLRVDHSVDYNSAALAEIRYSNSEISS
>NZ_CP050745.1|WP_010989063.1|1380476_1381070_+|hypothetical-protein
MPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPSEVKDRSLKAVMKLSRNSRGRKWLKTLGDDALPDLTASTQPSLRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDQILRKLKTLAKEQELPSDGLGRGTFYEVLKMEREK
>NZ_CP050745.1|WP_001536726.1|1377830_1378856_+|site-specific-integrase
MSIRKQPNGKWLCECYPNGRDGKRVRKQFATKGEAIAFENHTMDEVNKKPWLGEKEDRRHLSEVIDQWHSLYGQTLADPKRLMAKLSIICNGLGDPIASELTAGDFTKYREARLKGEVKNEDGVLMSPVKPRTVNLEQRNLSSVFGTLKKLGHWSAPNPLAGLPTFKIAEGELAFLAPEEIKRLLDACADSQSPSLLMIAKVCLATGARWSEAENLQGHQLSKYRITYTKTKGKKNRTVPISQDLYDELPKNRGKLFTPCRKAFERAVKRAGIELPEGQCTHVLRHTFASHFMMNGGNILVLRDILGHADIKMTMVYAHFAPDHLEDAVTKNPLHNLNWKR
>NZ_CP050745.1|WP_000052560.1|1377194_1377827_+|phage-repressor-protein
MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL
>NZ_CP050745.1|WP_000102104.1|1376838_1377078_-|hypothetical-protein
MSTDISIRVPKEMATPAEFAEWEGISRGSVYQKIHHGQLAKYMVKKEKNKGRVSLRYLMYKTDQVRESLGHSNFRVIVG
>NZ_CP050745.1|WP_000460862.1|1376293_1376803_-|phage-regulatory-CII-family-protein
MFDYKISKHPHFDEACRVFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLTDLTEDSTLVDGFLAQIHCLPCVPMNEVAKEKLPHYVMSATAEIGRIAAGAVSGDVKTTAGRRDVISSINSVTRLMALAAVSIQARLQANPAMASAVDTVTGLGASFGLI
>NZ_CP050745.1|WP_000957775.1|1376052_1376286_-|DUF2724-domain-containing-protein
MLTREPSFASLLVKQSPAMHYGHGWIYLPCGKKWHPCIELSPRQQAVRGIGKKRLLQRLSFNVAGILQTRRKAFPGS
>NZ_CP050745.1|WP_001520831.1|1387088_1388372_+|AAA-family-ATPase
MELRRISVNNLFGILNYDIDLGNSETIIITGPNGYGKTMLLKIIDNILNKNIDFFFDLRFEEIKFELDTILLCIEKQKNKNVAVTVVDYVNDKKRQEVFTLNKNKELDVDYFDEIYNKLLICDNIDSDPILKSYNHEEILNYYKIKKIKLHKEKHHKSDFLDKSIPNAELTFIKAQRIENIKNEKSAIESQANFLLELIKRAAEESAQISQRLDSTFPARLFDSINENISSTSINDRLIGIQRKRELFMKFGIIKSEDTFIPRKFSNATLGKEYSTVLNLYISDALEKLSPYEELFEKINLFVNLLNEKMLAFKEIKISNEHGFYFQSDNGERISLSNLSSGEQNQIVIYFDLIFKAKQNSVILIDEPEISLHVAWQKEFLDSIARIQKLNEFSKIIIATHSPQIVNNNWDITYDLFENNNKNMEGQ
>NZ_CP050745.1|WP_010989064.1|1388416_1389235_+|DUF4435-domain-containing-protein
MLLLFRSPKYSRKIFFTLEGESDIRFLNTHFADERIHYDSPCSGKPEVINAVQLLRSHGKQNVYGLCDADFDILEGNSYENIHFTDCHDLEMMLIEGGSFDKFISEFLKTSILRIHTLEDIRNNLKESIIDVTYKIGILKWLNFKNNLLLMFKGMKYDNFITFVDFSANIDIDNYIQHILDRSPRKPPHCDFNFLKKEYQLLYNKQADYKYVCNGHDFTYITMMAFHSEFSRDKNITQEKVESHLRIAYSATAFQRTNIYNELSGLIDSHNI
>NZ_CP050745.1|WP_010989065.1|1389388_1389745_-|helix-turn-helix-transcriptional-regulator
MPEDGCCPERDNSCMFRCRIAIVIGKRLKISRVRADLTQAELGALAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGSTLILSGNI
>NZ_CP050745.1|WP_000749979.1|1389839_1390124_+|transcriptional-regulator
MKKSTTKDWHPADIVAALHKRGTSLAKLSREAGLASSTLSNTLTRPWPKGEWLIAIALDMHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>NZ_CP050745.1|WP_000480483.1|1390236_1390758_+|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTVRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSRRGNAP
>NZ_CP050745.1|WP_000973738.1|1390754_1391129_+|PTS-glucitol/sorbitol-transporter-subunit-IIA
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLLLAGHDYLVTAVGKGVQQALFELGHLTLVFDGDLKPCHTGAIHLSGPVPKLHDLHGNLVIEEGRP
>NZ_CP050745.1|WP_001098984.1|1391125_1392106_+|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEVVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAQFISEDNYVSGVTIEQLVLVDTAEAPDGEPEPVSVTAPRIITTPPPARGAEKLVRMVERTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHALTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>NZ_CP050745.1|WP_001033832.1|1392116_1393130_+|Gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTESILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPTQWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSRICEAVHRSLESGKPEDV
>NZ_CP050745.1|WP_000889012.1|1393424_1394627_+|DUF3883-domain-containing-protein
MLEFHNVPLKTILRRAIMSLPTNFNDILRFFEKDYDTAKEDNALSARGQFLQLYPLNHLKKMTLDDYVIGKGTASFCACVEVKTRTWANMQGATALKFGIYYGKSKSDPTVRYRFTQKFGDDDSTNKEVFANVKDALLDLIQSGKELDFRAIDENPLSQMFKAKILSLYFPEHFINICSKDHLKEIAMEMGIKEQQFISKYQHLLFKKKLEHKITRNWSNPKYMSFLYAQFIRKDLSSAPAVIVKKPQKRNHPEVNFEEITDNRDLIGKKSEEYALNWEKNRLIGLGYSKLAEEIDDRRNRPTYGYDFLSFNAPGDERYIEVKSIGRDGKEGAFRFFLSGNELTVSNLSNHSKNYYFYLVQYGKDGEPCNLYVKHAQDLYTNSEMSPCAYVVRFDLEEPA
>NZ_CP050745.1|WP_000776032.1|1394700_1395336_-|3-hexulose-6-phosphate-synthase
MKLQLALDELTLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQHH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP050745_2	2.28\|1029852\|32\|NZ_CP050745\|PILER-CR	1029852-1029883	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
NZ_CP050745_2	2.28\|1029852\|32\|NZ_CP050745\|PILER-CR	1029852-1029883	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
NZ_CP050745_2	2.38\|1029849\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1029849-1029880	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
NZ_CP050745_2	2.38\|1029849\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1029849-1029880	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
NZ_CP050745_3	3.13\|1047046\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1047046-1047077	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
NZ_CP050745_3	3.13\|1047046\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1047046-1047077	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
NZ_CP050745_3	3.22\|1047045\|33\|NZ_CP050745\|PILER-CR	1047045-1047077	33	CP051275	Salmonella phage SW-37, complete genome	24294-24326	1	0.97
NZ_CP050745_3	3.22\|1047045\|33\|NZ_CP050745\|PILER-CR	1047045-1047077	33	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44003	1	0.97
NZ_CP050745_2	2.32\|1029482\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1029482-1029513	32	NZ_CP030204	Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence	130783-130814	2	0.938
NZ_CP050745_3	3.13\|1047046\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1047046-1047077	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
NZ_CP050745_2	2.22\|1029482\|35\|NZ_CP050745\|PILER-CR	1029482-1029516	35	NZ_CP030204	Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence	130780-130814	4	0.886
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1387347-1387378	5	0.844
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1461559-1461590	5	0.844
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	599340-599371	5	0.844
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	NC_012528	Deinococcus deserti VCD115 plasmid 3, complete sequence	121315-121346	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	850282-850313	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	887728-887759	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	856045-856076	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	835457-835488	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	953948-953979	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	431895-431926	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	843687-843718	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	833486-833517	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	457962-457993	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1502459-1502490	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1188725-1188756	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1094940-1094971	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	574071-574102	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	758103-758134	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	92938-92969	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1622461-1622492	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	174090-174121	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	996227-996258	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	856529-856560	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1026857-1026888	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	801217-801248	6	0.812
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	887731-887762	6	0.812
NZ_CP050745_3	3.11\|1046924\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046924-1046955	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
NZ_CP050745_3	3.20\|1046923\|33\|NZ_CP050745\|PILER-CR	1046923-1046955	33	MT774487	Salmonella phage MG40, complete genome	21745-21777	6	0.818
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	NZ_CP044078	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence	135155-135186	7	0.781
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	NZ_CP031081	Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence	195902-195933	7	0.781
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	581076-581107	7	0.781
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	122557-122588	7	0.781
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	529537-529568	7	0.781
NZ_CP050745_2	2.9\|1028689\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028689-1028720	32	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	327444-327475	7	0.781
NZ_CP050745_2	2.13\|1028933\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028933-1028964	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	208454-208485	7	0.781
NZ_CP050745_2	2.13\|1028933\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028933-1028964	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	449563-449594	7	0.781
NZ_CP050745_2	2.13\|1028933\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028933-1028964	32	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	167100-167131	7	0.781
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	360377-360408	7	0.781
NZ_CP050745_3	3.8\|1046741\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046741-1046772	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
NZ_CP050745_3	3.8\|1046741\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046741-1046772	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
NZ_CP050745_3	3.11\|1046924\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046924-1046955	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
NZ_CP050745_3	3.11\|1046924\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046924-1046955	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
NZ_CP050745_3	3.11\|1046924\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046924-1046955	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
NZ_CP050745_3	3.11\|1046924\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046924-1046955	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
NZ_CP050745_3	3.20\|1046923\|33\|NZ_CP050745\|PILER-CR	1046923-1046955	33	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39484	7	0.788
NZ_CP050745_3	3.20\|1046923\|33\|NZ_CP050745\|PILER-CR	1046923-1046955	33	MH370364	Salmonella phage S107, complete genome	29958-29990	7	0.788
NZ_CP050745_3	3.20\|1046923\|33\|NZ_CP050745\|PILER-CR	1046923-1046955	33	MH370382	Salmonella phage S135, complete genome	29958-29990	7	0.788
NZ_CP050745_3	3.20\|1046923\|33\|NZ_CP050745\|PILER-CR	1046923-1046955	33	MH370383	Salmonella phage S137, complete genome	29958-29990	7	0.788
NZ_CP050745_4	4.1\|1047272\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1047272-1047303	32	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	188177-188208	7	0.781
NZ_CP050745_4	4.1\|1047272\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1047272-1047303	32	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	192938-192969	7	0.781
NZ_CP050745_4	4.1\|1047272\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1047272-1047303	32	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	188204-188235	7	0.781
NZ_CP050745_2	2.6\|1028506\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028506-1028537	32	NC_028940	Pectobacterium bacteriophage PM2, complete genome	79087-79118	8	0.75
NZ_CP050745_2	2.7\|1028567\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028567-1028598	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	462005-462036	8	0.75
NZ_CP050745_2	2.16\|1029116\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029116-1029147	32	CP001770	Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence	145771-145802	8	0.75
NZ_CP050745_2	2.17\|1029177\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029177-1029208	32	LQ277707	Sequence 2 from Patent WO2016071503	12422-12453	8	0.75
NZ_CP050745_2	2.17\|1029177\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029177-1029208	32	LZ998055	JP 2017534684-A/2: Phage Therapy	12422-12453	8	0.75
NZ_CP050745_2	2.19\|1029299\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029299-1029330	32	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1098771-1098802	8	0.75
NZ_CP050745_2	2.19\|1029299\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029299-1029330	32	NZ_CP014128	Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence	160189-160220	8	0.75
NZ_CP050745_2	2.19\|1029299\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029299-1029330	32	NC_014561	Pantoea vagans C9-1 plasmid pPag1, complete sequence	156443-156474	8	0.75
NZ_CP050745_2	2.19\|1029299\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029299-1029330	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	137983-138014	8	0.75
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	43093-43124	8	0.75
NZ_CP050745_2	2.20\|1029360\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029360-1029391	32	NZ_CP053442	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence	152052-152083	8	0.75
NZ_CP050745_2	2.25\|1029669\|32\|NZ_CP050745\|PILER-CR	1029669-1029700	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
NZ_CP050745_2	2.25\|1029669\|32\|NZ_CP050745\|PILER-CR	1029669-1029700	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
NZ_CP050745_2	2.35\|1029666\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1029666-1029697	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
NZ_CP050745_2	2.35\|1029666\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1029666-1029697	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
NZ_CP050745_3	3.5\|1046558\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046558-1046589	32	AP013976	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, * SEQUENCING IN PROGRESS *	6246-6277	8	0.75
NZ_CP050745_3	3.5\|1046558\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046558-1046589	32	JX536274	Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence	3959-3990	8	0.75
NZ_CP050745_3	3.9\|1046802\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046802-1046833	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
NZ_CP050745_3	3.17\|1046740\|33\|NZ_CP050745\|PILER-CR	1046740-1046772	33	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142293-142325	8	0.758
NZ_CP050745_3	3.17\|1046740\|33\|NZ_CP050745\|PILER-CR	1046740-1046772	33	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29080	8	0.758
NZ_CP050745_4	4.2\|1047333\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1047333-1047364	32	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	8862-8893	8	0.75
NZ_CP050745_4	4.2\|1047333\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1047333-1047364	32	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	151600-151631	8	0.75
NZ_CP050745_4	4.5\|1047516\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1047516-1047547	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
NZ_CP050745_2	2.10\|1028750\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028750-1028781	32	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	353298-353329	9	0.719
NZ_CP050745_2	2.10\|1028750\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028750-1028781	32	AM749121	Streptococcus phage M102 complete genome	7893-7924	9	0.719
NZ_CP050745_2	2.10\|1028750\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028750-1028781	32	NC_012884	Streptococcus phage M102, complete genome	7893-7924	9	0.719
NZ_CP050745_2	2.12\|1028872\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028872-1028903	32	MN693046	Marine virus AFVG_25M413, complete genome	4323-4354	9	0.719
NZ_CP050745_2	2.12\|1028872\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028872-1028903	32	MN693008	Marine virus AFVG_117M9, complete genome	4316-4347	9	0.719
NZ_CP050745_2	2.13\|1028933\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028933-1028964	32	DQ674738	Aeromonas phage phiO18P, complete genome	15707-15738	9	0.719
NZ_CP050745_2	2.13\|1028933\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028933-1028964	32	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	380725-380756	9	0.719
NZ_CP050745_2	2.13\|1028933\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028933-1028964	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	153785-153816	9	0.719
NZ_CP050745_2	2.14\|1028994\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028994-1029025	32	MN694645	Marine virus AFVG_250M761, complete genome	31050-31081	9	0.719
NZ_CP050745_2	2.15\|1029055\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029055-1029086	32	MN062720	Microbacterium phage FuzzBuster, complete genome	19374-19405	9	0.719
NZ_CP050745_2	2.19\|1029299\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029299-1029330	32	NZ_CP045722	Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence	332-363	9	0.719
NZ_CP050745_2	2.19\|1029299\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029299-1029330	32	NZ_CP022519	Pantoea vagans strain FBS135 plasmid pPant3, complete sequence	62976-63007	9	0.719
NZ_CP050745_2	2.19\|1029299\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029299-1029330	32	NZ_CP028351	Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence	144976-145007	9	0.719
NZ_CP050745_2	2.23\|1029546\|32\|NZ_CP050745\|PILER-CR	1029546-1029577	32	NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	45237-45268	9	0.719
NZ_CP050745_2	2.33\|1029543\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1029543-1029574	32	NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	45237-45268	9	0.719
NZ_CP050745_3	3.6\|1046619\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046619-1046650	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
NZ_CP050745_3	3.11\|1046924\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046924-1046955	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
NZ_CP050745_2	2.6\|1028506\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028506-1028537	32	NZ_CP042995	Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence	68697-68728	10	0.688
NZ_CP050745_2	2.6\|1028506\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028506-1028537	32	NZ_CP026129	Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence	43950-43981	10	0.688
NZ_CP050745_2	2.6\|1028506\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028506-1028537	32	NZ_CP038501	Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence	49131-49162	10	0.688
NZ_CP050745_2	2.6\|1028506\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028506-1028537	32	NZ_CP046044	Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence	66631-66662	10	0.688
NZ_CP050745_2	2.6\|1028506\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028506-1028537	32	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	147167-147198	10	0.688
NZ_CP050745_2	2.11\|1028811\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028811-1028842	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1134787-1134818	10	0.688
NZ_CP050745_2	2.15\|1029055\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029055-1029086	32	NZ_CP019257	Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence	20006-20037	10	0.688
NZ_CP050745_2	2.15\|1029055\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029055-1029086	32	NZ_CP019274	Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence	9024-9055	10	0.688
NZ_CP050745_2	2.15\|1029055\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029055-1029086	32	NZ_CP019275	Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence	27130-27161	10	0.688
NZ_CP050745_2	2.15\|1029055\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029055-1029086	32	NZ_CP019279	Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence	19363-19394	10	0.688
NZ_CP050745_2	2.15\|1029055\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029055-1029086	32	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	23427-23458	10	0.688
NZ_CP050745_2	2.15\|1029055\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029055-1029086	32	NC_049342	Escherichia phage 500465-1, complete genome	24342-24373	10	0.688
NZ_CP050745_2	2.15\|1029055\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029055-1029086	32	KY271398	Klebsiella phage 4 LV-2017, complete genome	28240-28271	10	0.688
NZ_CP050745_2	2.15\|1029055\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1029055-1029086	32	CP025900	Escherichia phage sp., complete genome	24342-24373	10	0.688
NZ_CP050745_2	2.29\|1029913\|32\|NZ_CP050745\|PILER-CR	1029913-1029944	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
NZ_CP050745_2	2.39\|1029910\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1029910-1029941	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
NZ_CP050745_2	2.42\|1030093\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1030093-1030124	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
NZ_CP050745_3	3.5\|1046558\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046558-1046589	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	53255-53286	10	0.688
NZ_CP050745_3	3.6\|1046619\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046619-1046650	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
NZ_CP050745_3	3.6\|1046619\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046619-1046650	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
NZ_CP050745_3	3.6\|1046619\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046619-1046650	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
NZ_CP050745_3	3.6\|1046619\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046619-1046650	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
NZ_CP050745_3	3.6\|1046619\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1046619-1046650	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
NZ_CP050745_3	3.13\|1047046\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1047046-1047077	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
NZ_CP050745_4	4.6\|1047577\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1047577-1047608	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_CP050745_4	4.6\|1047577\|32\|NZ_CP050745\|CRISPRCasFinder,CRT	1047577-1047608	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
NZ_CP050745_2	2.13\|1028933\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028933-1028964	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	234768-234799	11	0.656
NZ_CP050745_2	2.13\|1028933\|32\|NZ_CP050745\|PILER-CR,CRISPRCasFinder,CRT	1028933-1028964	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	299431-299462	11	0.656

1. spacer 2.28|1029852|32|NZ_CP050745|PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

2. spacer 2.28|1029852|32|NZ_CP050745|PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

3. spacer 2.38|1029849|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

4. spacer 2.38|1029849|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

5. spacer 3.13|1047046|32|NZ_CP050745|CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ccacgttcggcgatgttggccccatcggtccg	Protospacer
*******************************.

6. spacer 3.13|1047046|32|NZ_CP050745|CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ccacattcggcgatgttggccccatcggtcca	Protospacer
****.***************************

7. spacer 3.22|1047045|33|NZ_CP050745|PILER-CR matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.97

gccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
gccacgttcggcgatgttggccccatcggtccg	Protospacer
********************************.

8. spacer 3.22|1047045|33|NZ_CP050745|PILER-CR matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.97

gccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
gccacattcggcgatgttggccccatcggtcca	Protospacer
*****.***************************

9. spacer 2.32|1029482|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 2, identity: 0.938

aaacgaaagaggctatgcggttgtttatcggt	CRISPR spacer
aaacgaaagaggccatgcgattgtttatcggt	Protospacer
*************.*****.************

10. spacer 3.13|1047046|32|NZ_CP050745|CRISPRCasFinder,CRT matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ctacgttcggtgatgttggccccataggtcca	Protospacer
*.********.************** ******

11. spacer 2.22|1029482|35|NZ_CP050745|PILER-CR matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 4, identity: 0.886

tcgaaacgaaagaggctatgcggttgtttatcggt	CRISPR spacer
atgaaacgaaagaggccatgcgattgtttatcggt	Protospacer
 .**************.*****.************

12. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

gatcgggtggtgccggtgggccatgtggcgct-	CRISPR spacer
gatcgggtggtgccgctggggcata-gccgctg	Protospacer
*************** **** ***. * ****

13. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

gatcgggtggtgccggtgggccatgtggcgct-	CRISPR spacer
gatcgggtggtgccgctggggcata-gccgctg	Protospacer
*************** **** ***. * ****

14. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

gatcgggtggtgccggtgggccatgtggcgct-	CRISPR spacer
gatcgggtggtgccgctggggcata-gccgctg	Protospacer
*************** **** ***. * ****

15. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_012528 (Deinococcus deserti VCD115 plasmid 3, complete sequence) position: , mismatch: 6, identity: 0.812

gatcgggtggtgccggtgggccatgtggcgct--	CRISPR spacer
ggtcgggtggtgcgggtcggcca--tggcgttgg	Protospacer
*.*********** *** *****  *****.*

16. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

17. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

18. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

19. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

20. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

21. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

22. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

23. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

24. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

25. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

26. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

27. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

28. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

29. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

30. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

31. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

32. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

33. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

34. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

35. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

36. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

37. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

38. spacer 3.11|1046924|32|NZ_CP050745|CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgg	Protospacer
 .  **********************  ****

39. spacer 3.20|1046923|33|NZ_CP050745|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.818

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgg	Protospacer
* .  **********************  ****

40. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044078 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg--ggtggtgccggtgggccatgtggcgct	CRISPR spacer
--ccgacgctggtggcggtgggccatgtggcggc	Protospacer
  .**  * ***** ***************** .

41. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg--ggtggtgccggtgggccatgtggcgct	CRISPR spacer
--ccgacgctggtggcggtgggccatgtggcggc	Protospacer
  .**  * ***** ***************** .

42. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg-ggtggtgccggtgggccatgtggcgct	CRISPR spacer
-atggcgatggagccgctgggccatgtggcggg	Protospacer
 ** * *.*** **** **************

43. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg-ggtggtgccggtgggccatgtggcgct	CRISPR spacer
-atggcgatggagccgctgggccatgtggcggg	Protospacer
 ** * *.*** **** **************

44. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg-ggtggtgccggtgggccatgtggcgct	CRISPR spacer
-atggcgatggagccgctgggccatgtggcggg	Protospacer
 ** * *.*** **** **************

45. spacer 2.9|1028689|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

gatcgggtggtgccggtgggccatgtggcgct	CRISPR spacer
gctagtgccgtgccggtgcgccatgtggggct	Protospacer
* * * *. ********* ********* ***

46. spacer 2.13|1028933|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*

47. spacer 2.13|1028933|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcaccgccgatcctttcaccgccgcc	Protospacer
********* ********* ****. *.  **

48. spacer 2.13|1028933|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*

49. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacggtgacgtcagtgccgaaggcgaaata	CRISPR spacer
tcttcggtgacgacattgccgaaggcgacgta	Protospacer
*.  ******** ** ************ .**

50. spacer 3.8|1046741|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

ttacgtgtttattcatctgttgcattagattc	CRISPR spacer
attggtgtttcttcatctattgcattagaagc	Protospacer
 *  ****** *******.**********  *

51. spacer 3.8|1046741|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

ttacgtgtttattcatctgttgcattagattc	CRISPR spacer
attggtgtttcttcatctattgcattagaagc	Protospacer
 *  ****** *******.**********  *

52. spacer 3.11|1046924|32|NZ_CP050745|CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

53. spacer 3.11|1046924|32|NZ_CP050745|CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

54. spacer 3.11|1046924|32|NZ_CP050745|CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

55. spacer 3.11|1046924|32|NZ_CP050745|CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

56. spacer 3.20|1046923|33|NZ_CP050745|PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.788

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

57. spacer 3.20|1046923|33|NZ_CP050745|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.788

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

58. spacer 3.20|1046923|33|NZ_CP050745|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.788

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

59. spacer 3.20|1046923|33|NZ_CP050745|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.788

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

60. spacer 4.1|1047272|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

61. spacer 4.1|1047272|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

62. spacer 4.1|1047272|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

63. spacer 2.6|1028506|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_028940 (Pectobacterium bacteriophage PM2, complete genome) position: , mismatch: 8, identity: 0.75

gctcattaaataactatataacccccggactc	CRISPR spacer
tatcattaaataactatataacacacgagagc	Protospacer
  ******************** * **..  *

64. spacer 2.7|1028567|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ttccagaaccgtttgacttactgtggccatta	CRISPR spacer
ctgccgaaccgtgtgccttactgtggccaccg	Protospacer
.* * ******* ** *************...

65. spacer 2.16|1029116|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 8, identity: 0.75

cggaggatggaatatttccgaggctggcgatt	CRISPR spacer
tgggagatggaatacttccggggctggcaacc	Protospacer
.**..*********.*****.*******.*..

66. spacer 2.17|1029177|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to LQ277707 (Sequence 2 from Patent WO2016071503) position: , mismatch: 8, identity: 0.75

atgccggaacgctgatggcgtttgacatgagc----	CRISPR spacer
ttgccggaacgctattggcgtttg----cagccttt	Protospacer
 ************. *********     ***

67. spacer 2.17|1029177|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to LZ998055 (JP 2017534684-A/2: Phage Therapy) position: , mismatch: 8, identity: 0.75

atgccggaacgctgatggcgtttgacatgagc----	CRISPR spacer
ttgccggaacgctattggcgtttg----cagccttt	Protospacer
 ************. *********     ***

68. spacer 2.19|1029299|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 8, identity: 0.75

tgacgctggtctataccggcaacgaacgcgac-	CRISPR spacer
atacgctggtctataccggcaa-ggatccgctg	Protospacer
  ******************** *.*. ** .

69. spacer 2.19|1029299|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014128 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacactggtctacaccggcaacgtaaaattc	Protospacer
****.********.********** * .   *

70. spacer 2.19|1029299|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_014561 (Pantoea vagans C9-1 plasmid pPag1, complete sequence) position: , mismatch: 8, identity: 0.75

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacactggtctacaccggcaacgtaaaattc	Protospacer
****.********.********** * .   *

71. spacer 2.19|1029299|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.75

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
ggacgctgttcaataccggcaacgtccggatc	Protospacer
 ******* ** ************  ** . *

72. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtgacgtcagtgccgaaggcgaaata	CRISPR spacer
tcgacggtgacgtccgtgacgaaggtgttcga	Protospacer
*.************ *** ******.*    *

73. spacer 2.20|1029360|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtgacgtcagtgccgaaggcgaaata	CRISPR spacer
ttctggtggacgtccgtgccgaaggcgcaatg	Protospacer
**   *  ****** ************ ***.

74. spacer 2.25|1029669|32|NZ_CP050745|PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
attcactatcagacattttattcagttctgcc	Protospacer
  ***** ** *****************  .

75. spacer 2.25|1029669|32|NZ_CP050745|PILER-CR matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
cgcgcgtgtctgacattgtattcagttcattt	Protospacer
**.   * ********* **********.**

76. spacer 2.35|1029666|32|NZ_CP050745|CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
attcactatcagacattttattcagttctgcc	Protospacer
  ***** ** *****************  .

77. spacer 2.35|1029666|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
cgcgcgtgtctgacattgtattcagttcattt	Protospacer
**.   * ********* **********.**

78. spacer 3.5|1046558|32|NZ_CP050745|CRISPRCasFinder,CRT matches to AP013976 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

ccgctgacgcactggatcaacctgacgcaacg	CRISPR spacer
acgcatcagcactggatcaagctggcgcaact	Protospacer
 ***    ************ ***.******

79. spacer 3.5|1046558|32|NZ_CP050745|CRISPRCasFinder,CRT matches to JX536274 (Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence) position: , mismatch: 8, identity: 0.75

ccgctgacgcactggatcaacctgacgcaacg	CRISPR spacer
acgcatcagcactggatcaagctggcgcaact	Protospacer
 ***    ************ ***.******

80. spacer 3.9|1046802|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gaggcgtac-----aggctgttagatgagaaattacc	CRISPR spacer
-----atactaataaggctgtttgatgcgaaattacc	Protospacer
     .***     ******** **** *********

81. spacer 3.17|1046740|33|NZ_CP050745|PILER-CR matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.758

gttacgtgtttattcatctgttgcattagattc	CRISPR spacer
aattggtgtttcttcatctattgcattagaagc	Protospacer
. *  ****** *******.**********  *

82. spacer 3.17|1046740|33|NZ_CP050745|PILER-CR matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 8, identity: 0.758

gttacgtgtttattcatctgttgcattagattc	CRISPR spacer
aattggtgtttcttcatctattgcattagaagc	Protospacer
. *  ****** *******.**********  *

83. spacer 4.2|1047333|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

ttcttgaatatgattgcgggtatatgtggata	CRISPR spacer
ctcttgaatatgattgcgggtttagatttacc	Protospacer
.******************** ** .*  *.

84. spacer 4.2|1047333|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcttgaatatgattgcgggtatatgtggata	CRISPR spacer
ctcttgaatatgattgcgggtttagatttacc	Protospacer
.******************** ** .*  *.

85. spacer 4.5|1047516|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

ggttaaccaggggtttttccccactatttcgc	CRISPR spacer
aggtaacgaggggtttttccccaatattgaaa	Protospacer
.* **** *************** ****  .

86. spacer 2.10|1028750|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 9, identity: 0.719

gcagcggttgagtaactcctcgtccacgtcga	CRISPR spacer
ggtgcgggtgaggaactcctcgtccactgaac	Protospacer
*  **** **** **************   .

87. spacer 2.10|1028750|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 9, identity: 0.719

gcagcggttgagtaactcctcgtccacgtcga	CRISPR spacer
aaggcggtggagtaactcctggtccagcccaa	Protospacer
. .***** *********** *****  .*.*

88. spacer 2.10|1028750|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 9, identity: 0.719

gcagcggttgagtaactcctcgtccacgtcga	CRISPR spacer
aaggcggtggagtaactcctggtccagcccaa	Protospacer
. .***** *********** *****  .*.*

89. spacer 2.12|1028872|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719

gcgaggtcaataaaaaatggtgtggctttacc	CRISPR spacer
ttagggtcaacaaaaaatggtgtggtttcaga	Protospacer
 ...******.**************.**.*

90. spacer 2.12|1028872|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719

gcgaggtcaataaaaaatggtgtggctttacc	CRISPR spacer
ttagggtcaacaaaaaatggtgtggtttcaga	Protospacer
 ...******.**************.**.*

91. spacer 2.13|1028933|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcagcgccgagcagttcagcaaactg	Protospacer
**************** * *****  . .*.

92. spacer 2.13|1028933|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
gcggcatcagcgccgaccggttcaccgtcagg	Protospacer
 ***************.* *****. **

93. spacer 2.13|1028933|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatgagcgccgatcagttcgacgccctg	Protospacer
******* ********** ****.  *. *.

94. spacer 2.14|1028994|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

aacaggaacaggaaaaaaaagatttgtccggt	CRISPR spacer
tacagtaacaggaaaaaaaggattaatgatgc	Protospacer
 **** *************.**** .*   *.

95. spacer 2.15|1029055|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 9, identity: 0.719

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaacggtcagcctgtccaggagga	Protospacer
****** *********** ****..**

96. spacer 2.19|1029299|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045722 (Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacgctgatctataccggcaacgtcaagttt	Protospacer
********.***************   .   .

97. spacer 2.19|1029299|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022519 (Pantoea vagans strain FBS135 plasmid pPant3, complete sequence) position: , mismatch: 9, identity: 0.719

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacgctgatctataccggcaacgtcaagttt	Protospacer
********.***************   .   .

98. spacer 2.19|1029299|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028351 (Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence) position: , mismatch: 9, identity: 0.719

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacactggtctacaccggcaacgtaaaattt	Protospacer
****.********.********** * .   .

99. spacer 2.23|1029546|32|NZ_CP050745|PILER-CR matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccccgatagcgacgcttctgtagtcactggca	CRISPR spacer
gtccgatagcgacacttcggtagtcaggcgtg	Protospacer
 .***********.**** *******   *..

100. spacer 2.33|1029543|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccccgatagcgacgcttctgtagtcactggca	CRISPR spacer
gtccgatagcgacacttcggtagtcaggcgtg	Protospacer
 .***********.**** *******   *..

101. spacer 3.6|1046619|32|NZ_CP050745|CRISPRCasFinder,CRT matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

ttgcag----ggcgatattgttgttggtgaatggga	CRISPR spacer
----aacactgacgatattattgttggtgattgggg	Protospacer
    *.    *.*******.********** ****.

102. spacer 3.11|1046924|32|NZ_CP050745|CRISPRCasFinder,CRT matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
tgagttcatccggcactaccggcgctggatgc	Protospacer
   ******* ************.**   **

103. spacer 2.6|1028506|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042995 (Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

104. spacer 2.6|1028506|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026129 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

105. spacer 2.6|1028506|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038501 (Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

106. spacer 2.6|1028506|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046044 (Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

107. spacer 2.6|1028506|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

108. spacer 2.11|1028811|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 10, identity: 0.688

ctccagcgctcgaatttatttgaggccaccac	CRISPR spacer
gaacaccgcgcgaatttatttgaggcaagttt	Protospacer
   ** *** **************** * . .

109. spacer 2.15|1029055|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019257 (Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

110. spacer 2.15|1029055|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019274 (Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

111. spacer 2.15|1029055|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019275 (Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

112. spacer 2.15|1029055|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019279 (Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

113. spacer 2.15|1029055|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

114. spacer 2.15|1029055|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NC_049342 (Escherichia phage 500465-1, complete genome) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

115. spacer 2.15|1029055|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to KY271398 (Klebsiella phage 4 LV-2017, complete genome) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

116. spacer 2.15|1029055|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to CP025900 (Escherichia phage sp., complete genome) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

117. spacer 2.29|1029913|32|NZ_CP050745|PILER-CR matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgatcgagagtgcgaagaggcagaacgggca	CRISPR spacer
gaaggtggcagtgccaagagacagaacgggca	Protospacer
  .. .*. ***** *****.***********

118. spacer 2.39|1029910|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgatcgagagtgcgaagaggcagaacgggca	CRISPR spacer
gaaggtggcagtgccaagagacagaacgggca	Protospacer
  .. .*. ***** *****.***********

119. spacer 2.42|1030093|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttcatcggcagcgtcacgcaatatgaagat	CRISPR spacer
acatcatcggcatcgtcacgccatatccggca	Protospacer
   ********* ******** ****  .*

120. spacer 3.5|1046558|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.688

ccgctgacgcactggatcaacctgacgcaacg	CRISPR spacer
aatctgacgcacttgatcaacctggcgtttga	Protospacer
   ********** **********.**.   .

121. spacer 3.6|1046619|32|NZ_CP050745|CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

122. spacer 3.6|1046619|32|NZ_CP050745|CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

123. spacer 3.6|1046619|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

124. spacer 3.6|1046619|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

125. spacer 3.6|1046619|32|NZ_CP050745|CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

126. spacer 3.13|1047046|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
actcgttcggcgatgtggcccccatccaggtg	Protospacer
 * ************* * ******* .  ..

127. spacer 4.6|1047577|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

128. spacer 4.6|1047577|32|NZ_CP050745|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

129. spacer 2.13|1028933|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

130. spacer 2.13|1028933|32|NZ_CP050745|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

65645 : 100522

Escherichia_phage(44.44%)

transposase,integrase

attL 60916:60945|attR 81546:81575

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
60916:60945	attL	NA	NA	NA	NA
WP_000935451.1\|65645_67361_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_000344784.1\|67363_68224_+	AAA family ATPase	NA	NA	NA	NA
WP_000287615.1\|68274_69819_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.0e-38	34.6
WP_001324342.1\|69941_71465_+\|transposase	IS21-like element IS1326 family transposase	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
WP_001163403.1\|71454_72237_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.5e-33	35.0
WP_000376623.1\|72412_72913_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|73040_73880_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000679427.1\|73873_74221_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001209508.1\|74384_75176_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_001334766.1\|75288_76119_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_000845048.1\|76328_77342_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_000454193.1\|77544_77895_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000147567.1\|78020_78581_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_001138064.1\|78583_81550_+\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000656305.1\|81616_81994_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
81546:81575	attR	NA	NA	NA	NA
WP_000412211.1\|82194_82854_-	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_049802299.1\|83826_84090_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_000460651.1\|84082_84469_+	hypothetical protein	NA	NA	NA	NA
WP_001284954.1\|84476_85163_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000088605.1\|85140_85764_-	tetracycline resistance transcriptional repressor TetR(B)	NA	NA	NA	NA
WP_001089068.1\|85845_87051_+	tetracycline efflux MFS transporter Tet(B)	NA	NA	NA	NA
WP_000428546.1\|87163_87757_-	tetracyline resistance-associated transcriptional repressor TetC	NA	NA	NA	NA
WP_000449408.1\|89083_89242_+	copper-sensitivity suppressor C	NA	NA	NA	NA
WP_000949452.1\|89231_89738_+	protein disulfide oxidoreductase	NA	NA	NA	NA
WP_012372823.1\|89920_90736_+	Na(+)-translocating NADH-quinone reductase subunit C	NA	NA	NA	NA
WP_000118029.1\|91082_92969_+	FTR1 family iron permease	NA	NA	NA	NA
WP_000178050.1\|93009_93537_+	iron transporter	NA	NA	NA	NA
WP_000119836.1\|93640_95020_+	DUF2318 domain-containing protein	NA	NA	NA	NA
WP_000964653.1\|95022_96306_+	ABC transporter permease	NA	NA	NA	NA
WP_000729220.1\|96295_97426_+	ABC transporter permease	NA	NA	NA	NA
WP_000117262.1\|97430_98126_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.3e-17	32.2
WP_001267177.1\|98112_98598_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_000874189.1\|98622_99108_+	hypothetical protein	NA	NA	NA	NA
WP_001067834.1\|99817_100522_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6

DBSCAN-SWA_2

1150249 : 1261304

114

Salmonella_phage(35.09%)

head,capsid,holin,portal,integrase,tail,lysis,protease,tRNA,terminase,transposase

attL 1142087:1142103|attR 1255525:1255541

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1142087:1142103	attL	NA	NA	NA	NA
WP_000047224.1\|1150249_1152880_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.5e-79	38.3
WP_000906486.1\|1153114_1153300_+	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	4.9e-12	66.7
WP_000271296.1\|1154694_1155261_+	fructose-1-phosphate/6-phosphogluconate phosphatase	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	7.2e-14	27.6
WP_001279499.1\|1155257_1155683_+	DedA family protein	NA	NA	NA	NA
WP_000611817.1\|1155759_1157316_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_001130194.1\|1157465_1157981_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_000645139.1\|1158326_1159697_+	carbohydrate porin	NA	NA	NA	NA
WP_001187300.1\|1159745_1161284_-	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	NA	NA
WP_001275603.1\|1161300_1162473_-	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	NA	NA
WP_000378431.1\|1162599_1163130_-	transcriptional repressor MprA	NA	NA	NA	NA
WP_000165758.1\|1163626_1164811_-	MFS transporter	NA	NA	NA	NA
WP_001216622.1\|1164975_1165971_-	glycine betaine/L-proline ABC transporter substrate-binding protein ProX	NA	NA	NA	NA
WP_000775022.1\|1166040_1167105_-	glycine betaine/L-proline ABC transporter permease ProW	NA	NA	NA	NA
WP_000985529.1\|1167097_1168300_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	1.4e-27	38.8
WP_000777903.1\|1168654_1169614_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0M4S3B4	Mycobacterium_phage	6.1e-130	71.8
WP_000246626.1\|1169624_1171769_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.7e-196	48.7
WP_001275401.1\|1171741_1172152_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	3.3e-16	41.8
WP_000028870.1\|1172148_1172394_-	glutaredoxin-like protein NrdH	NA	NA	NA	NA
WP_000209813.1\|1172665_1173097_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_001138459.1\|1173185_1174520_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_001519557.1\|1174603_1174930_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_000281305.1\|1175091_1175442_+	YgaC family protein	NA	NA	NA	NA
WP_000492669.1\|1175476_1175926_-	L-alanine exporter AlaE	NA	NA	NA	NA
WP_001051100.1\|1176624_1177026_+	DNA-binding protein StpA	NA	NA	NA	NA
WP_000494942.1\|1177115_1177295_-	hypothetical protein	NA	NA	NA	NA
WP_000022009.1\|1177373_1177901_-	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_000137432.1\|1177910_1178210_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000508175.1\|1178392_1178551_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_000522406.1\|1178650_1179100_+	peptidoglycan-binding protein LysM	A0A090DBR9	Clostridium_phage	7.5e-06	38.2
WP_000126152.1\|1179121_1179799_-	DNA-binding transcriptional regulator CsiR	NA	NA	NA	NA
WP_000531282.1\|1179840_1181241_-	GABA permease	NA	NA	NA	NA
WP_001095556.1\|1181370_1182654_-	4-aminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	6.0e-32	31.1
WP_001176529.1\|1182668_1184117_-	NADP-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000271907.1\|1184138_1185407_-	L-2-hydroxyglutarate oxidase	NA	NA	NA	NA
WP_000993096.1\|1185432_1186410_-	carbon starvation induced protein CsiD	NA	NA	NA	NA
WP_000382035.1\|1186712_1188227_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
WP_001574835.1\|1188237_1188672_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
WP_000744413.1\|1188683_1189661_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_001237934.1\|1189815_1190490_+	transcriptional regulator TctD	NA	NA	NA	NA
WP_000872348.1\|1190476_1191892_+	sensor histidine kinase	NA	NA	NA	NA
WP_001059352.1\|1192024_1193038_+	HoxN/HupN/NixA family nickel/cobalt transporter	NA	NA	NA	NA
WP_000701506.1\|1193759_1194656_-	antimicrobial resistance protein Mig-14	NA	NA	NA	NA
WP_000178733.1\|1194948_1195878_-	VirK family antimicrobial peptide resistance protein	NA	NA	NA	NA
WP_001738474.1\|1196396_1197449_+	SPI-2 type III secretion system effector PipB2	NA	NA	NA	NA
WP_014343883.1\|1197623_1197956_+	hypothetical protein	NA	NA	NA	NA
WP_001687277.1\|1198481_1200662_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_000274378.1\|1200703_1201639_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001239941.1\|1201670_1202915_-	esterase family protein	NA	NA	NA	NA
WP_167787403.1\|1203024_1206678_-	salmochelin/enterobactin export ABC transporter IroC	W8CYL7	Bacillus_phage	1.4e-44	28.4
WP_001221110.1\|1206758_1207874_-	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	NA	NA
WP_000178853.1\|1210012_1210255_-	hypothetical protein	NA	NA	NA	NA
WP_000514917.1\|1210293_1213656_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.7
WP_000246126.1\|1213717_1214365_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
WP_000662739.1\|1214262_1215000_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
WP_001152689.1\|1215006_1215705_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
WP_000447369.1\|1215714_1216044_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
WP_000372072.1\|1216046_1219142_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	6.1e-280	62.3
WP_010989052.1\|1219113_1219452_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000479607.1\|1219448_1219844_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_000971954.1\|1219894_1220641_-\|tail	tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
WP_000033885.1\|1220648_1221050_-\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
WP_000817263.1\|1221158_1222289_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	9.2e-218	100.0
WP_000677089.1\|1222337_1222916_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
WP_000083294.1\|1222943_1223327_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
WP_000201486.1\|1223337_1223697_-	DNA packaging protein	NA	NA	NA	NA
WP_000522566.1\|1223754_1224783_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
WP_000011260.1\|1224837_1225185_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
WP_001189503.1\|1225197_1226694_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
WP_000831821.1\|1226683_1228264_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
WP_000201415.1\|1228260_1228464_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
WP_000623091.1\|1228447_1230379_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
WP_001102153.1\|1230350_1230896_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
WP_000669690.1\|1231182_1231584_+	hypothetical protein	NA	NA	NA	NA
WP_001533543.1\|1231819_1232272_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
WP_000984581.1\|1232289_1232742_-	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	97.3
WP_001574216.1\|1232725_1233055_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_001110786.1\|1233330_1234017_+\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	7.9e-132	99.6
WP_000657897.1\|1234231_1234420_-	hypothetical protein	NA	NA	NA	NA
WP_000211409.1\|1234926_1235490_-	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	7.6e-56	92.2
WP_001097241.1\|1235762_1236440_-	antitermination protein	I6PDF8	Cronobacter_phage	7.7e-63	54.0
WP_000801757.1\|1236436_1236577_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
WP_001096550.1\|1236573_1237185_-	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
WP_000929803.1\|1237393_1237996_-	DUF1367 family protein	S4TTI0	Salmonella_phage	1.1e-108	98.5
WP_000807548.1\|1238078_1238300_-	hypothetical protein	NA	NA	NA	NA
WP_001217665.1\|1238411_1238645_-	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
WP_010989003.1\|1238936_1239227_-	hypothetical protein	NA	NA	NA	NA
WP_000065108.1\|1239304_1239616_-	ead/Ea22-like family protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
WP_000113629.1\|1239612_1239960_-	DUF977 family protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
WP_000800010.1\|1239970_1240720_-	ATP-binding protein	S4TNF5	Salmonella_phage	3.6e-138	99.6
WP_000062941.1\|1240722_1241706_-	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
WP_167787404.1\|1241790_1242165_-	hypothetical protein	S4TTD7	Salmonella_phage	1.1e-63	98.4
WP_000370145.1\|1242130_1242370_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
WP_001038966.1\|1242489_1242900_+	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
WP_010989055.1\|1242949_1243210_+	hypothetical protein	NA	NA	NA	NA
WP_000917562.1\|1243202_1243361_+	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
WP_014344461.1\|1243382_1243682_+	hypothetical protein	S4TSN6	Salmonella_phage	1.4e-48	83.6
WP_000017125.1\|1243808_1246736_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	99.3
WP_071892913.1\|1246698_1247856_+	recombinase RecT	S4TTE8	Salmonella_phage	7.9e-217	99.7
WP_001237031.1\|1247898_1248138_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_001670787.1\|1248178_1248463_+	excisionase Xis	H6WRW8	Salmonella_phage	3.1e-42	86.2
WP_001007939.1\|1248440_1249670_-\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	2.9e-233	94.4
WP_000589087.1\|1250167_1250647_-	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_000812017.1\|1250643_1251600_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_001168374.1\|1251599_1252250_-	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_000003307.1\|1252281_1252857_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_014344135.1\|1252853_1253018_-	rpoE leader peptide RseD	NA	NA	NA	NA
WP_000989177.1\|1253281_1254904_+	L-aspartate oxidase	NA	NA	NA	NA
WP_000083343.1\|1254888_1255626_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
1255525:1255541	attR	NA	NA	NA	NA
WP_000219174.1\|1255756_1257091_+	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
WP_001526875.1\|1257108_1258008_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000188414.1\|1258110_1258698_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627811.1\|1258759_1259143_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
WP_000179978.1\|1259461_1260151_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
WP_000997368.1\|1260266_1261304_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_3

1282436 : 1317044

Cronobacter_phage(64.52%)

head,capsid,holin,portal,integrase,tail,tRNA,terminase

attL 1280889:1280904|attR 1309052:1309067

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1280889:1280904	attL	NA	NA	NA	NA
WP_024136261.1\|1282436_1284137_-	hypothetical protein	F1BUJ7	Cronobacter_phage	2.9e-223	81.4
WP_000200792.1\|1284139_1284685_-	hypothetical protein	F1BUJ9	Cronobacter_phage	3.5e-58	71.4
WP_000267951.1\|1284656_1285382_-	hypothetical protein	F1BUK1	Cronobacter_phage	6.6e-68	56.4
WP_000122989.1\|1285371_1285926_-\|tail	tail fiber assembly protein	S4TUB9	Salmonella_phage	4.6e-98	97.2
WP_025614139.1\|1285938_1288182_-\|tail	tail protein	Q8HAB4	Salmonella_phage	3.4e-171	72.7
WP_001001823.1\|1288191_1288779_-	hypothetical protein	F1BUK5	Cronobacter_phage	8.4e-90	82.1
WP_000136921.1\|1288771_1289956_-	hypothetical protein	F1BUK6	Cronobacter_phage	6.7e-179	78.4
WP_001002797.1\|1289952_1290282_-	DUF2590 family protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
WP_000811099.1\|1290278_1292246_-\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	1.9e-271	70.7
WP_000411498.1\|1292433_1292691_-	hypothetical protein	A5X9I7	Aeromonas_virus	3.1e-20	61.0
WP_000376377.1\|1292837_1293170_-	hypothetical protein	F1BUL2	Cronobacter_phage	2.2e-34	69.1
WP_000175558.1\|1293169_1293511_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	2.2e-50	91.1
WP_001154426.1\|1293507_1293804_-\|holin	holin	C7BGD7	Burkholderia_phage	2.4e-16	48.2
WP_000166745.1\|1293816_1294272_-	DUF2597 family protein	F1BUL4	Cronobacter_phage	1.7e-58	71.5
WP_000220185.1\|1294268_1295396_-	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	1.6e-174	82.9
WP_000606932.1\|1295392_1296097_-	hypothetical protein	F1BUL6	Cronobacter_phage	2.0e-69	59.5
WP_000080872.1\|1296093_1296576_-\|tail	phage tail protein	F1BUL7	Cronobacter_phage	4.0e-37	48.7
WP_031602415.1\|1296572_1297064_-\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	1.3e-48	64.7
WP_000505908.1\|1297118_1297310_-	hypothetical protein	NA	NA	NA	NA
WP_167787427.1\|1297328_1298027_-\|terminase	terminase	F1BUM0	Cronobacter_phage	2.7e-63	53.0
WP_001176504.1\|1298038_1299067_-\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.7e-133	71.6
WP_031603163.1\|1299101_1299941_-\|capsid	phage capsid scaffolding protein	F1BUM4	Cronobacter_phage	4.8e-46	52.0
WP_001151938.1\|1300151_1301936_+	hypothetical protein	F1BUM5	Cronobacter_phage	1.8e-247	69.7
WP_000746493.1\|1301932_1302952_+\|portal	phage portal protein	F1BUM7	Cronobacter_phage	1.0e-135	68.5
WP_000088096.1\|1302951_1303275_+	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	1.3e-36	73.1
WP_000994502.1\|1303302_1305960_-	hypothetical protein	A0A077K8T2	Ralstonia_phage	4.6e-244	47.5
WP_031603162.1\|1305998_1306217_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	8.9e-05	37.7
WP_000681786.1\|1306219_1306789_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	1.2e-43	46.8
WP_167787405.1\|1306798_1307131_-	hypothetical protein	NA	NA	NA	NA
WP_000661530.1\|1307156_1307495_-	hypothetical protein	NA	NA	NA	NA
WP_000085723.1\|1307603_1307903_+	helix-turn-helix domain-containing protein	Q1JS21	Enterobacteria_phage	3.8e-22	53.2
WP_024136262.1\|1307969_1308962_+\|integrase	integrase	A0A0F7LBR0	Escherichia_phage	4.7e-109	58.5
WP_010989056.1\|1309125_1309173_+	hypothetical protein	NA	NA	NA	NA
1309052:1309067	attR	NA	NA	NA	NA
WP_000200080.1\|1309272_1310433_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000210995.1\|1310393_1311302_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_000225191.1\|1311359_1312481_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168062.1\|1312490_1313561_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
WP_001212379.1\|1314000_1314519_+	YfiR family protein	NA	NA	NA	NA
WP_001030985.1\|1314511_1315732_+	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
WP_000065257.1\|1315888_1316236_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000469804.1\|1316276_1317044_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_4

1345443 : 1378856

Salmonella_phage(97.56%)

head,capsid,plate,integrase,portal,tail,lysis,terminase

attL 1345282:1345328|attR 1378974:1379020

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1345282:1345328	attL	NA	NA	NA	NA
WP_000980498.1\|1345443_1345662_-	hypothetical protein	Q53ZE7	Salmonella_virus	2.1e-38	100.0
WP_001010543.1\|1345730_1346831_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	3.4e-193	98.1
WP_000980418.1\|1346827_1347313_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	2.4e-66	98.5
WP_001282773.1\|1347309_1350117_-\|tail	phage tail tape measure protein	A0A1S6L010	Salmonella_phage	0.0e+00	99.7
WP_000763317.1\|1350109_1350229_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	8.8e-15	97.4
WP_001280967.1\|1350243_1350546_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	9.4e-45	99.0
WP_001207652.1\|1350600_1351116_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	7.9e-92	98.8
WP_000046109.1\|1351125_1352298_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.7e-223	99.7
WP_167787406.1\|1352400_1352958_-	serine-type DNA invertase Fin	A0A1S6L009	Salmonella_phage	3.0e-97	97.8
WP_010989058.1\|1352927_1354007_+	hypothetical protein	A0A1B0V7G4	Salmonella_phage	5.4e-183	92.1
WP_001287105.1\|1354013_1354421_+\|tail	tail assembly protein	A0A1B0V844	Salmonella_phage	2.2e-60	84.4
WP_010989059.1\|1354424_1355042_-\|tail	tail fiber assembly protein	A0A1B0VCD0	Salmonella_phage	4.1e-95	84.6
WP_001274647.1\|1355011_1356586_-\|tail	tail protein	A0A1S6KZZ8	Salmonella_phage	2.1e-156	60.7
WP_001086807.1\|1356582_1357188_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	4.1e-116	98.0
WP_000268333.1\|1357180_1358089_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.7e-159	99.0
WP_000177403.1\|1358075_1358435_-\|plate	baseplate assembly protein	E5G6N7	Salmonella_phage	8.0e-59	98.3
WP_000993751.1\|1358431_1359010_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	3.3e-107	98.4
WP_000343947.1\|1359078_1359525_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.9e-65	89.0
WP_001039961.1\|1359517_1359949_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.1e-75	99.3
WP_001648763.1\|1360044_1360473_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	2.6e-64	95.0
WP_000871617.1\|1360469_1360844_-	hypothetical protein	NA	NA	NA	NA
WP_001069932.1\|1360848_1361358_-	lysozyme	A0A1S6KZY9	Salmonella_phage	3.5e-92	97.6
WP_000171565.1\|1361338_1361554_-	hypothetical protein	E5G6N0	Salmonella_phage	5.9e-33	100.0
WP_000868168.1\|1361557_1361761_-\|tail	tail protein X	E5G6M9	Salmonella_phage	1.1e-33	98.5
WP_000673534.1\|1361760_1362225_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.9e-84	98.1
WP_000059178.1\|1362318_1362972_-\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	4.6e-113	98.6
WP_000730755.1\|1362975_1364058_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	1.6e-190	97.7
WP_000216276.1\|1364074_1364908_-\|capsid	GPO family capsid scaffolding protein	E5G6M5	Salmonella_phage	3.1e-130	100.0
WP_001098444.1\|1365050_1366817_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	97.3
WP_001292071.1\|1366816_1367857_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.4e-188	93.0
WP_071892914.1\|1367942_1369694_-	AIPR family protein	NA	NA	NA	NA
WP_014344476.1\|1369907_1370585_-	hypothetical protein	NA	NA	NA	NA
WP_001217575.1\|1370698_1370932_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154433.1\|1370942_1371131_-	hypothetical protein	E5G6M0	Salmonella_phage	1.4e-27	100.0
WP_000301161.1\|1371283_1373713_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	91.8
WP_000104125.1\|1373703_1374561_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.7e-129	80.4
WP_000785509.1\|1374557_1374785_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	1.3e-35	93.3
WP_001244234.1\|1374784_1375018_-	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	2.0e-26	84.4
WP_000963195.1\|1375085_1375427_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.2e-49	85.0
WP_000166366.1\|1375646_1376105_+	hypothetical protein	NA	NA	NA	NA
WP_000957775.1\|1376052_1376286_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	3.6e-12	59.1
WP_000460862.1\|1376293_1376803_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	5.1e-83	92.9
WP_000102104.1\|1376838_1377078_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	8.8e-38	98.7
WP_000052560.1\|1377194_1377827_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-66	58.6
WP_001536726.1\|1377830_1378856_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	9.9e-203	100.0
1378974:1379020	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1401454 : 1438390

Salmonella_phage(27.27%)

tail,transposase,integrase,tRNA

attL 1401563:1401579|attR 1450652:1450668

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000088556.1\|1401454_1402330_+\|integrase	integrase	NA	NA	NA	NA
1401563:1401579	attL	NA	NA	NA	NA
WP_001521074.1\|1402495_1404370_+	membrane protein	NA	NA	NA	NA
WP_010989066.1\|1404629_1405913_-	membrane protein	NA	NA	NA	NA
WP_001682341.1\|1406490_1407087_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B5FPC6	Escherichia_phage	2.6e-99	91.3
WP_000061088.1\|1408800_1409439_-	hypothetical protein	NA	NA	NA	NA
WP_000073810.1\|1409435_1411418_-	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_085983317.1\|1411696_1412858_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	5.2e-51	41.9
WP_000388997.1\|1413638_1414178_-	phase 1 flagellin gene repressor FljA	NA	NA	NA	NA
WP_000079794.1\|1414245_1415766_-	FliC/FljB family flagellin	NA	NA	NA	NA
WP_000190912.1\|1416129_1416702_-	flagellar phase variation DNA invertase Hin	A0A0A7NPV4	Enterobacteria_phage	8.8e-68	72.6
WP_000593433.1\|1417676_1418501_+\|tail	tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
WP_000143154.1\|1418490_1419069_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
WP_010989049.1\|1419165_1419393_-	PagK-like protein	NA	NA	NA	NA
WP_001738443.1\|1419499_1419712_+	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
WP_001526383.1\|1420464_1420584_+\|transposase	transposase	NA	NA	NA	NA
WP_001542312.1\|1421296_1421434_-	hypothetical protein	NA	NA	NA	NA
WP_010989047.1\|1421912_1423406_-	type III secretion effector GogB	Q9MBM1	Phage_Gifsy-1	3.4e-260	100.0
WP_000790154.1\|1423810_1425610_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
WP_000002559.1\|1425626_1426601_+	signal peptidase I	NA	NA	NA	NA
WP_001068341.1\|1426874_1427555_+	ribonuclease III	A0A2K9L5P0	Tupanvirus	7.4e-21	31.8
WP_080069629.1\|1427551_1428457_+	GTPase Era	NA	NA	NA	NA
WP_000399380.1\|1428468_1429197_+	DNA repair protein RecO	NA	NA	NA	NA
WP_000818972.1\|1429208_1429940_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_000986043.1\|1429939_1430320_+	holo-ACP synthase	NA	NA	NA	NA
WP_001196290.1\|1430431_1430692_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.4e-17	52.3
WP_001022463.1\|1430729_1431656_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.0e-09	24.4
WP_001276365.1\|1431771_1432968_+	OFA family MFS transporter	NA	NA	NA	NA
WP_000684022.1\|1432989_1433907_+	oxidoreductase	NA	NA	NA	NA
WP_000995703.1\|1433945_1434794_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_001048530.1\|1434909_1435803_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_000361663.1\|1435813_1437175_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_000253558.1\|1437178_1437814_+	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_001134566.1\|1437838_1438390_+\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
1450652:1450668	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1791451 : 1821044

Salmonella_phage(38.46%)

tail,protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000781589.1\|1791451_1791946_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_000228070.1\|1792359_1792851_+	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_001260058.1\|1792840_1793104_+	chaperone NapD	NA	NA	NA	NA
WP_000778097.1\|1793100_1795587_+	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA
WP_000091673.1\|1795593_1796289_+	ferredoxin-type protein NapG	NA	NA	NA	NA
WP_000013529.1\|1796275_1797145_+	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
WP_000835182.1\|1797260_1797710_+	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
WP_000431778.1\|1797719_1798322_+	cytochrome c-type protein NapC	NA	NA	NA	NA
WP_000888541.1\|1798342_1798960_+	cytochrome c biogenesis heme-transporting ATPase CcmA	A0A2R8FG22	Brazilian_cedratvirus	2.4e-10	29.8
WP_000990028.1\|1798956_1799616_+	heme exporter protein CcmB	NA	NA	NA	NA
WP_000266008.1\|1799667_1800405_+	heme ABC transporter permease	NA	NA	NA	NA
WP_000074110.1\|1800401_1800614_+	heme exporter protein CcmD	NA	NA	NA	NA
WP_001053618.1\|1800610_1801090_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_000982518.1\|1801086_1803018_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_000828296.1\|1803014_1803572_+	thiol:disulfide interchange protein DsbE	NA	NA	NA	NA
WP_001238333.1\|1803568_1804612_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_001115498.1\|1804655_1805303_-	nitrate/nitrite response regulator protein NarP	NA	NA	NA	NA
WP_000281877.1\|1806032_1806596_+	acyloxyacyl hydrolase	NA	NA	NA	NA
WP_001653202.1\|1806787_1806991_-	virulence protein MsgA	NA	NA	NA	NA
WP_000624225.1\|1807293_1808085_+\|tail	tail protein	Q1MVL8	Enterobacteria_phage	1.7e-48	31.6
WP_001113462.1\|1808381_1808585_+\|tail	tail protein	NA	NA	NA	NA
WP_001115840.1\|1808753_1811120_+	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	2.9e-72	88.7
WP_001202279.1\|1811448_1812438_+	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
WP_010989045.1\|1812452_1812821_+	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
WP_000894639.1\|1812849_1814181_-	AAA family ATPase	R9TRQ8	Vibrio_phage	2.1e-19	28.5
WP_001120499.1\|1814477_1814807_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
WP_000554739.1\|1815399_1816641_+	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
WP_001215679.1\|1816643_1817171_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
WP_000022213.1\|1817548_1817992_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
WP_000639473.1\|1818045_1819875_-	acyltransferase	C6ZR20	Salmonella_phage	3.0e-61	29.6
WP_000884778.1\|1820222_1820513_-	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
WP_000806401.1\|1820540_1821044_+	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3

DBSCAN-SWA_7

1893096 : 1902267

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1893096_1894044_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
WP_000824855.1\|1894027_1894759_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1894739_1894847_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1894906_1895638_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272845.1\|1895860_1897546_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
WP_000598637.1\|1897542_1898262_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1898308_1898776_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_001197952.1\|1898832_1899363_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1899534_1899993_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_000195332.1\|1900233_1902267_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_8

1970575 : 1981081

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001111841.1\|1970575_1971979_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	27.1
WP_000981469.1\|1972156_1973050_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_000697840.1\|1973426_1974512_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
WP_001023662.1\|1974511_1975411_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_000857529.1\|1975458_1976337_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.3e-109	65.5
WP_000973708.1\|1976337_1976889_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
WP_000018226.1\|1976894_1977887_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000648784.1\|1977883_1978657_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000565905.1\|1978661_1979741_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
WP_000126349.1\|1979767_1981081_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_9

2070424 : 2077678

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000394196.1\|2070424_2070844_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000457662.1\|2070846_2072115_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	4.2e-227	92.2
WP_000208509.1\|2072569_2072782_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131109.1\|2072792_2072981_+	hypothetical protein	NA	NA	NA	NA
WP_001080680.1\|2073241_2074438_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.8e-110	56.1
WP_000107430.1\|2075087_2075387_+	membrane protein	NA	NA	NA	NA
WP_000377041.1\|2075478_2076174_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_001157322.1\|2076247_2077678_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_10

2973718 : 3058453

Salmonella_phage(43.64%)

holin,portal,integrase,tail,lysis,protease,tRNA,terminase

attL 2997812:2997831|attR 3069599:3069618

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000938191.1\|2973718_2974399_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	8.3e-81	70.6
WP_000374050.1\|2975019_2975679_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.3e-43	51.9
WP_000904446.1\|2975765_2976095_+	sulfurtransferase TusE	NA	NA	NA	NA
WP_000072884.1\|2976091_2976373_-	acylphosphatase	NA	NA	NA	NA
WP_000548082.1\|2976421_2977201_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000859419.1\|2977226_2977775_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_000140480.1\|2977989_2979201_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000561983.1\|2979258_2979576_+	heat shock protein HspQ	NA	NA	NA	NA
WP_001537782.1\|2979620_2980034_-	CoA-binding protein	NA	NA	NA	NA
WP_000847719.1\|2980207_2980870_+	DUF2057 family protein	NA	NA	NA	NA
WP_000424187.1\|2980964_2981423_+	methylglyoxal synthase	NA	NA	NA	NA
WP_000420505.1\|2981458_2983513_-	DNA helicase IV	A7KV33	Bacillus_phage	8.5e-20	27.6
WP_001261222.1\|2983636_2984083_+	YccF domain-containing protein	NA	NA	NA	NA
WP_000950880.1\|2984101_2986255_+	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001202375.1\|2986241_2986847_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_000288732.1\|2987063_2987573_+	cell division inhibitor SulA	NA	NA	NA	NA
WP_001674965.1\|2987929_2988982_+	porin OmpA	NA	NA	NA	NA
WP_000877172.1\|2989053_2989506_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_000156454.1\|2989691_2991452_+\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000227928.1\|2991520_2992039_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_001537784.1\|2992138_2992306_-	ribosome modulation factor	NA	NA	NA	NA
WP_000759136.1\|2992561_2993125_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_000433414.1\|2993121_2994762_-	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_000333152.1\|2994766_2996020_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_000053044.1\|2996034_2997942_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
2997812:2997831	attL	NA	NA	NA	NA
WP_001086485.1\|2997954_3000063_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_000224069.1\|3000161_3001271_+	MOSC domain-containing protein	NA	NA	NA	NA
WP_001220671.1\|3001267_3001810_-	cell division protein ZapC	NA	NA	NA	NA
WP_000291723.1\|3001975_3002986_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_000193784.1\|3003193_3005806_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
WP_000497441.1\|3006232_3006424_+	DinI-like family protein	S4TNM0	Salmonella_phage	6.2e-26	95.2
WP_001525490.1\|3006694_3007381_+	hypothetical protein	NA	NA	NA	NA
WP_010989011.1\|3007365_3007665_+	hypothetical protein	NA	NA	NA	NA
WP_000334547.1\|3007733_3008360_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
WP_001533476.1\|3009007_3009976_-	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	7.9e-194	99.7
WP_000143167.1\|3010451_3011033_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
WP_014344464.1\|3011032_3013471_-\|tail	tail protein	A0A0K2FIZ6	Escherichia_phage	2.9e-91	63.4
WP_000178849.1\|3013524_3013767_-	hypothetical protein	NA	NA	NA	NA
WP_001687102.1\|3013805_3014681_-	DUF1983 domain-containing protein	K7PKJ2	Enterobacteria_phage	1.1e-48	77.1
WP_001541992.1\|3014707_3017155_-	host specificity protein J	Q687E8	Enterobacteria_phage	0.0e+00	68.0
WP_000246065.1\|3017226_3017931_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.2e-67	62.6
WP_000606351.1\|3017828_3018566_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.6e-114	76.1
WP_001152415.1\|3018575_3019271_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.3e-89	66.7
WP_000877926.1\|3019360_3019894_+	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
WP_000725267.1\|3020010_3020508_-	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
WP_000978296.1\|3020606_3020939_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	3.3e-35	61.5
WP_010989010.1\|3020935_3023923_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	8.2e-266	62.1
WP_010989009.1\|3024002_3024332_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
WP_000478859.1\|3024328_3024727_-\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	8.6e-30	56.8
WP_000132756.1\|3024772_3025522_-\|tail	tail protein	A0A291AWU6	Escherichia_phage	3.7e-90	68.6
WP_000196702.1\|3025533_3025935_-\|tail	tail protein	K7PHM6	Enterobacterial_phage	1.5e-42	60.9
WP_000453194.1\|3025931_3026498_-\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	9.5e-14	97.8
WP_000774239.1\|3026478_3026778_-	ATP-binding protein	K7PH43	Enterobacteria_phage	4.5e-15	45.1
WP_001107908.1\|3026770_3027094_-	DUF2190 family protein	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
WP_010989008.1\|3027184_3029266_-\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	4.8e-265	69.5
WP_001009207.1\|3029189_3030737_-\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	2.8e-177	64.3
WP_000196190.1\|3030733_3030940_-	hypothetical protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
WP_000989241.1\|3030936_3033075_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.4e-290	72.6
WP_000371784.1\|3033031_3033565_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.0e-33	48.1
WP_001541990.1\|3033772_3034252_-\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.4e-55	77.0
WP_000984586.1\|3034269_3034722_-	lysozyme	A0A0M4R365	Salmonella_phage	2.3e-79	97.3
WP_001574216.1\|3034705_3035035_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_001141973.1\|3035310_3035997_+\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
WP_000798705.1\|3036357_3036807_+	hypothetical protein	NA	NA	NA	NA
WP_001534733.1\|3036942_3037068_-	hypothetical protein	NA	NA	NA	NA
WP_010989004.1\|3037241_3037559_-	hypothetical protein	NA	NA	NA	NA
WP_001047631.1\|3037625_3038423_-	antitermination protein	A0A0M4S661	Salmonella_phage	2.3e-151	99.6
WP_001617856.1\|3038412_3038559_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
WP_001096552.1\|3038555_3039167_-	hypothetical protein	A0A0M4RU10	Salmonella_phage	6.9e-79	91.6
WP_000929802.1\|3039375_3039978_-	DUF1367 family protein	S4TTI0	Salmonella_phage	2.8e-109	99.0
WP_000807548.1\|3040060_3040282_-	hypothetical protein	NA	NA	NA	NA
WP_001217665.1\|3040393_3040627_-	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
WP_010989003.1\|3040918_3041209_-	hypothetical protein	NA	NA	NA	NA
WP_000065108.1\|3041286_3041598_-	ead/Ea22-like family protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
WP_000113629.1\|3041594_3041942_-	DUF977 family protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
WP_000800010.1\|3041952_3042702_-	ATP-binding protein	S4TNF5	Salmonella_phage	3.6e-138	99.6
WP_000062941.1\|3042704_3043688_-	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
WP_167787404.1\|3043772_3044147_-	hypothetical protein	S4TTD7	Salmonella_phage	1.1e-63	98.4
WP_000370145.1\|3044112_3044352_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
WP_001038966.1\|3044471_3044882_+	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
WP_010989055.1\|3044931_3045192_+	hypothetical protein	NA	NA	NA	NA
WP_000917562.1\|3045184_3045343_+	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
WP_014344461.1\|3045364_3045664_+	hypothetical protein	S4TSN6	Salmonella_phage	1.4e-48	83.6
WP_020979158.1\|3045790_3048676_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	97.2
WP_001539618.1\|3048638_3049796_+	recombinase RecT	S4TTE8	Salmonella_phage	1.6e-217	100.0
WP_001237031.1\|3049838_3050078_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_000065276.1\|3050118_3050367_+	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001262306.1\|3050411_3051704_+\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	1.0e-252	99.8
WP_000191399.1\|3051898_3053101_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_000893207.1\|3053178_3054615_-	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_000544849.1\|3054859_3056074_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_000762342.1\|3056390_3056852_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000117870.1\|3057052_3058453_+\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
3069599:3069618	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3122589 : 3131321

Enterobacteria_phage(14.29%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085983316.1\|3122589_3123844_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	5.4e-17	33.9
WP_000502119.1\|3124307_3124766_-\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_000934063.1\|3124957_3127234_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000520789.1\|3127264_3127585_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000447499.1\|3127908_3128130_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000125877.1\|3128259_3130206_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
WP_001201751.1\|3130202_3131321_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_12

3711926 : 3723022

Enterobacteria_phage(66.67%)

transposase,integrase

attL 3697692:3697706|attR 3731371:3731385

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3697692:3697706	attL	NA	NA	NA	NA
WP_000915528.1\|3711926_3712289_+	GtrA family protein	A0A192Y6N5	Salmonella_phage	5.0e-61	100.0
WP_167787418.1\|3712285_3712606_+	glycosyltransferase	A8CG95	Salmonella_phage	6.1e-34	100.0
WP_000957857.1\|3712620_3712809_+	hypothetical protein	NA	NA	NA	NA
WP_000948429.1\|3712818_3714018_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_167787419.1\|3714202_3714781_+	recombinase	Q76H40	Enterobacteria_phage	5.3e-113	100.0
WP_001253476.1\|3714780_3715065_+	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_001111291.1\|3715111_3715405_+	DUF2856 family protein	Q76H42	Enterobacteria_phage	1.4e-48	100.0
WP_001214777.1\|3715415_3715586_+	DUF2737 family protein	Q76H43	Enterobacteria_phage	1.6e-25	100.0
WP_000812203.1\|3715582_3716092_+	hypothetical protein	Q76H44	Enterobacteria_phage	2.8e-89	100.0
WP_071533029.1\|3716088_3716322_+	hypothetical protein	NA	NA	NA	NA
WP_025617570.1\|3716308_3716953_+	DUF551 domain-containing protein	Q76H45	Enterobacteria_phage	1.4e-122	99.5
WP_000371199.1\|3716952_3717237_+	DUF4752 family protein	Q76H46	Enterobacteria_phage	1.6e-49	100.0
WP_000002104.1\|3717229_3717514_+	ASCH domain-containing protein	Q76H28	Enterobacteria_phage	1.4e-50	100.0
WP_155675089.1\|3717582_3717723_+	hypothetical protein	A0A0M4QWX3	Salmonella_phage	4.2e-16	97.8
WP_000051897.1\|3717952_3719116_+\|integrase	site-specific integrase	Q76H30	Enterobacteria_phage	3.7e-230	100.0
WP_000893231.1\|3719321_3720572_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.6e-98	47.5
WP_001285275.1\|3720583_3721687_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
WP_001043675.1\|3721969_3723022_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.7e-112	58.5
3731371:3731385	attR	NA	NA	NA	NA

DBSCAN-SWA_13

4550280 : 4597324

Burkholderia_phage(40.91%)

tail,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001182237.1\|4550280_4551279_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039339.1\|4551366_4552677_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416272.1\|4552923_4553439_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4553537_4553747_-	CsbD family protein	NA	NA	NA	NA
WP_010989093.1\|4553768_4553882_-	hypothetical protein	NA	NA	NA	NA
WP_001128116.1\|4553878_4555204_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4555382_4555991_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002902.1\|4556099_4556468_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4556638_4559059_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455249.1\|4559157_4560030_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019219.1\|4560043_4560541_-	chorismate lyase	NA	NA	NA	NA
WP_000782504.1\|4560721_4561639_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973645.1\|4561802_4563161_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4563249_4564359_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000695417.1\|4564720_4565911_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382573.1\|4566042_4567587_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252085.1\|4567601_4568492_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982749.1\|4568657_4569068_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750804.1\|4569210_4571307_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_000977979.1\|4571306_4572044_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_022742863.1\|4572040_4572709_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4572742_4572985_-	outer membrane protein	NA	NA	NA	NA
WP_000790037.1\|4573428_4575078_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136400.1\|4575422_4576772_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4576904_4577252_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226442.1\|4577827_4578115_+	membrane protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
WP_001270442.1\|4578117_4578723_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	4.2e-60	59.9
WP_000777266.1\|4578735_4579050_+	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_000449433.1\|4579209_4579665_+	hypothetical protein	NA	NA	NA	NA
WP_000875314.1\|4579661_4579859_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000729852.1\|4579848_4581276_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
WP_000907494.1\|4581275_4581800_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_001003642.1\|4581851_4582169_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001185654.1\|4582128_4582257_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001262499.1\|4582353_4584708_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.0e-66	30.6
WP_000271423.1\|4584707_4585661_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_001269716.1\|4585660_4585870_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000818154.1\|4585857_4586901_+	phage late control D family protein	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
WP_000679398.1\|4586910_4587633_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
WP_000593182.1\|4587960_4588323_+	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000703632.1\|4588319_4589249_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	8.8e-150	83.8
WP_001095011.1\|4589248_4590796_+	membrane protein	B9UDL6	Salmonella_phage	1.9e-48	29.9
WP_001093501.1\|4590959_4591319_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_000951736.1\|4591309_4592425_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.8e-101	52.2
WP_000359500.1\|4592417_4593050_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
WP_000368196.1\|4593052_4594798_+\|tail	tail protein	A0A0M3ULF6	Salmonella_phage	3.2e-52	52.2
WP_001526208.1\|4594802_4595408_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_000084331.1\|4595404_4595860_+	hypothetical protein	NA	NA	NA	NA
WP_010989092.1\|4596108_4596399_+	membrane protein	NA	NA	NA	NA
WP_000587738.1\|4596595_4597324_+	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050747

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP050746

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP050748

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP050745

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection