CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP050810	Trueperella pyogenes strain jx18 chromosome, complete genome	5 crisprs	cas5,cas6e,cas1,cas2,DinG,DEDDh,WYL,cas4,csa3,cas3,cas8e,cse2gr11	1	16	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050810_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050810_1

3978-7421

Unclear

I-E

Consensus_repeat	Method
GTGGTCCCCGCGCAGGCGGGGATGAGCC	PILER-CR
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CRISPRCasFinder
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CRT

56 spacers

cas2,cas1,cas6e,cas5,cas7

The CRISPR arrays of NZ_CP050810_1

>merge|NZ_CP050810|1|3978-7421|PILER-CR,CRISPRCasFinder,CRT
GTGGTCCCCGCGCAGGCGGGGATGAGCCGGCCAATAGTCGTTGTCCACGACGTCGGCGTTAGTGGTCCCCGCGCAGGCGGGGATGAGCCTTGCCCACGCGCCACTAACAACCGATGAGAAAAGTGGTCCCCGCGCAGGCGGGGATGAGCCGTGATTAACGCCCTCGGCGGCTTCGCTGGACTCGTGGTCCCCGCGCAGGCGGGGATGAGCCCCCTAAGGGTGGCTTCGACGTCGTTGAGCATTGGTGGTCCCCGCGCAGGCGGGGATGAGCCTGTGACCGTGCCCACTGGTGCGTGGGCGTCCGGGTGGTCCCCGCGCAGGCGGGGATGAGCCGGCGTGGCGAGATCTATGCATGGACGCCGGCGTGTGGTCCCCGCGCAGGCGGGGATGAGCCCCCGATCACGCGGAACCTTCAACGCAAGCTTCCGTGGTCCCCGCGCAGGCGGGGATGAGCCCACCCGGCCCCTCAAAAGCCGCGTCGGTCGAAAGTGGTCCCCGCGCAGGCGGGGATGAGCCCTGGGGGTCAGGCATCAGCGTGCAGACCTCACAGTGGTCCCCGCGCAGGCGGGGATGAGCCCCCGGCCAAGTCGCCACCCCTGACGGGTAGGAAGTGGTCCCCGCGCAGGCGGGGATGAGCCGTGGATTGCTGGGCGCGGACCGCTTCCACCGCGGTGGTCCCCGCGCAGGCGGGGATGAGCCCAAAATCGTTAATCACCATCAGTGCCCCTTTATGTGGTCCCCGCGCAGGCGGGGATGAGCCGGTCTCCAACTGGGCCGTGTTCAATGCCTGCTCGTGGTCCCCGCGCAGGCGGGGATGAGCCGACTCCTCCATGTGTAAGAATCGAGAGCATGGGGTGGTCCCCGCGCAGGCGGGGATGAGCCCTCGGTGCCCTTCTGTTTGAAAATCTCGAACGCGTGGTCCCCGCGCAGGCGGGGATGAGCCCGTCTGGAAGGTCGACAATTCGTCGGGGACGCCGTGGTCCCCGCGCAGGCGGGGATGAGCCCCGCTGGTGACATCTGGTGGACATACGACGCCTGTGGTCCCCGCGCAGGCGGGGATGAGCCGACCACCAAGCGCACCAACGACAGCCTGGACAGGTGGTCCCCGCGCAGGCGGGGATGAGCCGCAGGTCAAGTCTGATGTGTCTGGGCGCGAGTTGTGGTCCCCGCGCAGGCGGGGATGAGCCTAGGTCGGAATCCGACTGAAATCCACATGCCCAGTGGTCCCCGCGCAGGCGGGGATGAGCCCGAACTGGGTGCCCTGCAATTCCGGCTATATTCGTGGTCCCCGCGCAGGCGGGGATGAGCCTTAGAAAAGATGCTTGCGGAGAAAAACGCTGATGTGGTCCCCGCGCAGGCGGGGATGAGCCCCCCGTACACCAAGTTCGCGGCCTACGCCCTCTGTGGTCCCCGCGCAGGCGGGGATGAGCCGTCTGTTACATGGGTTGCGGCGTATTCGCTTGCGTGGTCCCCGCGCAGGCGGGGATGAGCCCGCCTTGGTGGATGCCGGGATTTCCCTAGGTGGGTGGTCCCCGCGCAGGCGGGGATGAGCCCTGCTCGACGTCAGCGCGGATATTTACCGCGATGTGGTCCCCGCGCAGGCGGGGATGAGCCCGATCATTCAGCGTTAATGTGGCAGCCAGGGTGGTGGTCCCCGCGCAGGCGGGGATGAGCCCCGCGTGGGCGGGTTCAACCGTTCCAGAGGCTTGTGGTCCCCGCGCAGGCGGGGATGAGCCCAATGACCACGACGATCGGGTTACAACCTACAAGTGGTCCCCGCGCAGGCGGGGATGAGCCCCTGCCCAACGGGCAAACCCGTGACGTGTACGCGTGGTCCCCGCGCAGGCGGGGATGAGCCTGATGAGCTTGCCCTTTACGTGTGGCTGCTCCTGTGGTCCCCGCGCAGGCGGGGATGAGCCGACTATTGGACGCTGACGCTTGCCGAGCGTGAAGTGGTCCCCGCGCAGGCGGGGATGAGCCGACATGGTTTTGCACGGTGGTCGGCATGGTATCGTGGTCCCCGCGCAGGCGGGGATGAGCCGCTTGGCTCCTCGCGCCAGAGCATGCATCACAAGTGGTCCCCGCGCAGGCGGGGATGAGCCCCGCGAATGAAAACCACGATACGTACCCTCGCTGTGGTCCCCGCGCAGGCGGGGATGAGCCGCCGAAAAGGAGCCGCCCGGCTGGCAAGACCACGTGGTCCCCGCGCAGGCGGGGATGAGCCGTCAAAGGGGCGTTCTCCGCCAATAACCCGTCAGTGGTCCCCGCGCAGGCGGGGATGAGCCCCGGTAGTGGCCGGGCAGGCTCACGCCGACCCGGTGGTCCCCGCGCAGGCGGGGATGAGCCCAGTGCCACGCACTACACGGCCGCCACCATCGAGTGGTCCCCGCGCAGGCGGGGATGAGCCCGCGACCTTGATCCCGCCACCCGAATAGGACAGGTGGTCCCTGCGCAGGCGGGGATGAGCCGCACGAGGGGTTTAGGAACGCTGTCAATACAGCGTGGTCCCCGCGCAGGCGGGGATGAGCCTGGCACAATTTGGCCACGGTTGAGCACACCGGCGTGGTCCCCGCGCAGGCGGGGATGAGCCGCGTGTGACGGCACAGATCAAGGCCGATACCGGGTGGTCCCCGCGCAGGCGGGGATGAGCCTTTTGGGTATGGTGGCCGCCAGTGGGCGGAGTTGTGGTCCCCGCGCAGGCGGGGATGAGCCGAGCACGACGTCCTATATCTGATCACCGAATAAGTGGTCCCCGCGCAGGCGGGGATGAGCCGCCATGCCGGGTATCGTGACGGTGGTGGATGACGTGGTCCCCGCGCAGGCGGGGATGAGCCCGTCATCTCGCATATCGAGGCGACGAACCACGAGTGGTCCCCGCGCAGGCGGGGATGAGCCGTTCGCGGATCTTACGAGCGGTTTGCGTATGTCGTGGTCCCCGCGCAGGCGGGGATGAGCCTTCCACCGAAGAGAGTCCCACACGGCGAGGTCTGTGGTCCCCGCGCAGGCGGGGATGAGCCCGGGATCGAGCAGACGATTACCGCGACCGGCGTGTGGTCCCCGCGCAGGCGGGGATGAGCCGCCGGGCCTGCAGTGGTGGCGCGATATAACCGGGTGGTCCCCGCGCAGGCGGGGATGAGCCCGGTTTCTACCCACGTTTTAACTACTTCAAGTGGTGGTCCCCGCGCAGGCGGGGATGAGCCCACGCACATGTGTGAAATGTAGCGGCGGGCGTGGTGGTCCCCGCGCGGGCGGGGATGAGCCGCCTCATACAATGCGCCGATCCTGCCTTTCAGTGTGGTCCCCGCGCAGGCGGGGATGAGCCGACGCGGGAAAGCTCTTGGCCTCGTGGCCTGGTGTGGTCCCCGCGCAGGCGGGGATGAGCCCGCACACGTGTCGTAAGTGTCGCGGGTCGCGCAGTGGTCCCCGCGCAGGCGGGGATGACGT

>NZ_CP050810|1|1|3978-7360|PILER-CR
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GGCCAATAGTCGTTGTCCACGACGTCGGCGTTA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTGCCCACGCGCCACTAACAACCGATGAGAAAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTGATTAACGCCCTCGGCGGCTTCGCTGGACTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCTAAGGGTGGCTTCGACGTCGTTGAGCATTG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TGTGACCGTGCCCACTGGTGCGTGGGCGTCCGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GGCGTGGCGAGATCTATGCATGGACGCCGGCGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCGATCACGCGGAACCTTCAACGCAAGCTTCC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CACCCGGCCCCTCAAAAGCCGCGTCGGTCGAAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CTGGGGGTCAGGCATCAGCGTGCAGACCTCACA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCGGCCAAGTCGCCACCCCTGACGGGTAGGAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTGGATTGCTGGGCGCGGACCGCTTCCACCGCG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CAAAATCGTTAATCACCATCAGTGCCCCTTTAT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GGTCTCCAACTGGGCCGTGTTCAATGCCTGCTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACTCCTCCATGTGTAAGAATCGAGAGCATGGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CTCGGTGCCCTTCTGTTTGAAAATCTCGAACGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGTCTGGAAGGTCGACAATTCGTCGGGGACGCC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGCTGGTGACATCTGGTGGACATACGACGCCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACCACCAAGCGCACCAACGACAGCCTGGACAG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCAGGTCAAGTCTGATGTGTCTGGGCGCGAGTT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TAGGTCGGAATCCGACTGAAATCCACATGCCCA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGAACTGGGTGCCCTGCAATTCCGGCTATATTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTAGAAAAGATGCTTGCGGAGAAAAACGCTGAT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCCGTACACCAAGTTCGCGGCCTACGCCCTCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTCTGTTACATGGGTTGCGGCGTATTCGCTTGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGCCTTGGTGGATGCCGGGATTTCCCTAGGTGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CTGCTCGACGTCAGCGCGGATATTTACCGCGAT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGATCATTCAGCGTTAATGTGGCAGCCAGGGTG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGCGTGGGCGGGTTCAACCGTTCCAGAGGCTT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CAATGACCACGACGATCGGGTTACAACCTACAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCTGCCCAACGGGCAAACCCGTGACGTGTACGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TGATGAGCTTGCCCTTTACGTGTGGCTGCTCCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACTATTGGACGCTGACGCTTGCCGAGCGTGAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACATGGTTTTGCACGGTGGTCGGCATGGTATC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCTTGGCTCCTCGCGCCAGAGCATGCATCACAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGCGAATGAAAACCACGATACGTACCCTCGCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCCGAAAAGGAGCCGCCCGGCTGGCAAGACCAC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTCAAAGGGGCGTTCTCCGCCAATAACCCGTCA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGGTAGTGGCCGGGCAGGCTCACGCCGACCCG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CAGTGCCACGCACTACACGGCCGCCACCATCGA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGCGACCTTGATCCCGCCACCCGAATAGGACAG
GTGGTCCCTGCGCAGGCGGGGATGAGCC	GCACGAGGGGTTTAGGAACGCTGTCAATACAGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TGGCACAATTTGGCCACGGTTGAGCACACCGGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCGTGTGACGGCACAGATCAAGGCCGATACCGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTTTGGGTATGGTGGCCGCCAGTGGGCGGAGTT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GAGCACGACGTCCTATATCTGATCACCGAATAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCCATGCCGGGTATCGTGACGGTGGTGGATGAC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGTCATCTCGCATATCGAGGCGACGAACCACGA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTTCGCGGATCTTACGAGCGGTTTGCGTATGTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTCCACCGAAGAGAGTCCCACACGGCGAGGTCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGGGATCGAGCAGACGATTACCGCGACCGGCGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCCGGGCCTGCAGTGGTGGCGCGATATAACCGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGGTTTCTACCCACGTTTTAACTACTTCAAGTG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CACGCACATGTGTGAAATGTAGCGGCGGGCGTG
GTGGTCCCCGCGCGGGCGGGGATGAGCC	GCCTCATACAATGCGCCGATCCTGCCTTTCAGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACGCGGGAAAGCTCTTGGCCTCGTGGCCTGGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC

>NZ_CP050810|1|1|3978-7421|CRISPRCasFinder
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GGCCAATAGTCGTTGTCCACGACGTCGGCGTTA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTGCCCACGCGCCACTAACAACCGATGAGAAAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTGATTAACGCCCTCGGCGGCTTCGCTGGACTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCTAAGGGTGGCTTCGACGTCGTTGAGCATTG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TGTGACCGTGCCCACTGGTGCGTGGGCGTCCGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GGCGTGGCGAGATCTATGCATGGACGCCGGCGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCGATCACGCGGAACCTTCAACGCAAGCTTCC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CACCCGGCCCCTCAAAAGCCGCGTCGGTCGAAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CTGGGGGTCAGGCATCAGCGTGCAGACCTCACA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCGGCCAAGTCGCCACCCCTGACGGGTAGGAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTGGATTGCTGGGCGCGGACCGCTTCCACCGCG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CAAAATCGTTAATCACCATCAGTGCCCCTTTAT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GGTCTCCAACTGGGCCGTGTTCAATGCCTGCTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACTCCTCCATGTGTAAGAATCGAGAGCATGGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CTCGGTGCCCTTCTGTTTGAAAATCTCGAACGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGTCTGGAAGGTCGACAATTCGTCGGGGACGCC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGCTGGTGACATCTGGTGGACATACGACGCCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACCACCAAGCGCACCAACGACAGCCTGGACAG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCAGGTCAAGTCTGATGTGTCTGGGCGCGAGTT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TAGGTCGGAATCCGACTGAAATCCACATGCCCA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGAACTGGGTGCCCTGCAATTCCGGCTATATTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTAGAAAAGATGCTTGCGGAGAAAAACGCTGAT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCCGTACACCAAGTTCGCGGCCTACGCCCTCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTCTGTTACATGGGTTGCGGCGTATTCGCTTGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGCCTTGGTGGATGCCGGGATTTCCCTAGGTGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CTGCTCGACGTCAGCGCGGATATTTACCGCGAT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGATCATTCAGCGTTAATGTGGCAGCCAGGGTG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGCGTGGGCGGGTTCAACCGTTCCAGAGGCTT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CAATGACCACGACGATCGGGTTACAACCTACAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCTGCCCAACGGGCAAACCCGTGACGTGTACGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TGATGAGCTTGCCCTTTACGTGTGGCTGCTCCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACTATTGGACGCTGACGCTTGCCGAGCGTGAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACATGGTTTTGCACGGTGGTCGGCATGGTATC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCTTGGCTCCTCGCGCCAGAGCATGCATCACAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGCGAATGAAAACCACGATACGTACCCTCGCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCCGAAAAGGAGCCGCCCGGCTGGCAAGACCAC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTCAAAGGGGCGTTCTCCGCCAATAACCCGTCA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGGTAGTGGCCGGGCAGGCTCACGCCGACCCG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CAGTGCCACGCACTACACGGCCGCCACCATCGA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGCGACCTTGATCCCGCCACCCGAATAGGACAG
GTGGTCCCTGCGCAGGCGGGGATGAGCC	GCACGAGGGGTTTAGGAACGCTGTCAATACAGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TGGCACAATTTGGCCACGGTTGAGCACACCGGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCGTGTGACGGCACAGATCAAGGCCGATACCGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTTTGGGTATGGTGGCCGCCAGTGGGCGGAGTT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GAGCACGACGTCCTATATCTGATCACCGAATAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCCATGCCGGGTATCGTGACGGTGGTGGATGAC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGTCATCTCGCATATCGAGGCGACGAACCACGA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTTCGCGGATCTTACGAGCGGTTTGCGTATGTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTCCACCGAAGAGAGTCCCACACGGCGAGGTCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGGGATCGAGCAGACGATTACCGCGACCGGCGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCCGGGCCTGCAGTGGTGGCGCGATATAACCGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGGTTTCTACCCACGTTTTAACTACTTCAAGTG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CACGCACATGTGTGAAATGTAGCGGCGGGCGTG
GTGGTCCCCGCGCGGGCGGGGATGAGCC	GCCTCATACAATGCGCCGATCCTGCCTTTCAGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACGCGGGAAAGCTCTTGGCCTCGTGGCCTGGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGCACACGTGTCGTAAGTGTCGCGGGTCGCGCA
GTGGTCCCCGCGCAGGCGGGGATGACGT

>NZ_CP050810|1|1|3978-7421|CRT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GGCCAATAGTCGTTGTCCACGACGTCGGCGTTA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTGCCCACGCGCCACTAACAACCGATGAGAAAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTGATTAACGCCCTCGGCGGCTTCGCTGGACTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCTAAGGGTGGCTTCGACGTCGTTGAGCATTG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TGTGACCGTGCCCACTGGTGCGTGGGCGTCCGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GGCGTGGCGAGATCTATGCATGGACGCCGGCGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCGATCACGCGGAACCTTCAACGCAAGCTTCC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CACCCGGCCCCTCAAAAGCCGCGTCGGTCGAAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CTGGGGGTCAGGCATCAGCGTGCAGACCTCACA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCGGCCAAGTCGCCACCCCTGACGGGTAGGAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTGGATTGCTGGGCGCGGACCGCTTCCACCGCG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CAAAATCGTTAATCACCATCAGTGCCCCTTTAT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GGTCTCCAACTGGGCCGTGTTCAATGCCTGCTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACTCCTCCATGTGTAAGAATCGAGAGCATGGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CTCGGTGCCCTTCTGTTTGAAAATCTCGAACGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGTCTGGAAGGTCGACAATTCGTCGGGGACGCC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGCTGGTGACATCTGGTGGACATACGACGCCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACCACCAAGCGCACCAACGACAGCCTGGACAG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCAGGTCAAGTCTGATGTGTCTGGGCGCGAGTT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TAGGTCGGAATCCGACTGAAATCCACATGCCCA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGAACTGGGTGCCCTGCAATTCCGGCTATATTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTAGAAAAGATGCTTGCGGAGAAAAACGCTGAT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCCCGTACACCAAGTTCGCGGCCTACGCCCTCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTCTGTTACATGGGTTGCGGCGTATTCGCTTGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGCCTTGGTGGATGCCGGGATTTCCCTAGGTGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CTGCTCGACGTCAGCGCGGATATTTACCGCGAT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGATCATTCAGCGTTAATGTGGCAGCCAGGGTG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGCGTGGGCGGGTTCAACCGTTCCAGAGGCTT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CAATGACCACGACGATCGGGTTACAACCTACAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCTGCCCAACGGGCAAACCCGTGACGTGTACGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TGATGAGCTTGCCCTTTACGTGTGGCTGCTCCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACTATTGGACGCTGACGCTTGCCGAGCGTGAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACATGGTTTTGCACGGTGGTCGGCATGGTATC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCTTGGCTCCTCGCGCCAGAGCATGCATCACAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGCGAATGAAAACCACGATACGTACCCTCGCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCCGAAAAGGAGCCGCCCGGCTGGCAAGACCAC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTCAAAGGGGCGTTCTCCGCCAATAACCCGTCA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CCGGTAGTGGCCGGGCAGGCTCACGCCGACCCG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CAGTGCCACGCACTACACGGCCGCCACCATCGA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGCGACCTTGATCCCGCCACCCGAATAGGACAG
GTGGTCCCTGCGCAGGCGGGGATGAGCC	GCACGAGGGGTTTAGGAACGCTGTCAATACAGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TGGCACAATTTGGCCACGGTTGAGCACACCGGC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCGTGTGACGGCACAGATCAAGGCCGATACCGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTTTGGGTATGGTGGCCGCCAGTGGGCGGAGTT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GAGCACGACGTCCTATATCTGATCACCGAATAA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCCATGCCGGGTATCGTGACGGTGGTGGATGAC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGTCATCTCGCATATCGAGGCGACGAACCACGA
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GTTCGCGGATCTTACGAGCGGTTTGCGTATGTC
GTGGTCCCCGCGCAGGCGGGGATGAGCC	TTCCACCGAAGAGAGTCCCACACGGCGAGGTCT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGGGATCGAGCAGACGATTACCGCGACCGGCGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GCCGGGCCTGCAGTGGTGGCGCGATATAACCGG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGGTTTCTACCCACGTTTTAACTACTTCAAGTG
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CACGCACATGTGTGAAATGTAGCGGCGGGCGTG
GTGGTCCCCGCGCGGGCGGGGATGAGCC	GCCTCATACAATGCGCCGATCCTGCCTTTCAGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	GACGCGGGAAAGCTCTTGGCCTCGTGGCCTGGT
GTGGTCCCCGCGCAGGCGGGGATGAGCC	CGCACACGTGTCGTAAGTGTCGCGGGTCGCGCA
GTGGTCCCCGCGCAGGCGGGGATGACGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050810.1\|WP_114949731.1\|13797_15072_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP050810.1\|WP_080754015.1\|3458_3803_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_CP050810.1\|WP_108726134.1\|1850_2519_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_CP050810.1\|WP_159081050.1\|9383_9998_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|376540
NZ_CP050810.1\|WP_039662977.1\|10263_11961_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471
NZ_CP050810.1\|WP_115324241.1\|1146_1851_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP050810.1\|WP_108726126.1\|15156_16458_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP050810.1\|WP_108726125.1\|17559_20292_+\|pyruvate,-phosphate-dikinase	unknown	unknown	gnl\|CDD\|236446
NZ_CP050810.1\|WP_159081051.1\|8266_9130_-\|Abi-family-protein	unknown	unknown	gnl\|CDD\|377910
NZ_CP050810.1\|WP_159081052.1\|7591_7888_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP050810.1\|WP_108726135.1\|0_1143_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP050810.1\|WP_108726128.1\|12898_13795_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP050810.1\|WP_108726131.1\|7915_8119_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|281658
NZ_CP050810.1\|WP_108726133.1\|2521_3454_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP050810.1\|WP_025296984.1\|12014_12890_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
NZ_CP050810.1\|WP_114949731.1\|13797_15072_-\|extracellular-solute-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.24268e-36
NZ_CP050810.1\|WP_080754015.1\|3458_3803_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	5.69141e-42
NZ_CP050810.1\|WP_108726134.1\|1850_2519_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.28783e-71
NZ_CP050810.1\|WP_159081050.1\|9383_9998_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	1.4257e-14
NZ_CP050810.1\|WP_039662977.1\|10263_11961_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP050810.1\|WP_115324241.1\|1146_1851_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.46729e-41
NZ_CP050810.1\|WP_108726126.1\|15156_16458_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.74945e-31
NZ_CP050810.1\|WP_108726125.1\|17559_20292_+\|pyruvate,-phosphate-dikinase	gnl\|CDD\|236446	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.	0
NZ_CP050810.1\|WP_159081051.1\|8266_9130_-\|Abi-family-protein	gnl\|CDD\|377910	pfam07751, Abi_2, Abi-like protein. This family, found in various bacterial species, contains sequences that are similar to the Abi group of proteins, which are involved in bacteriophage resistance mediated by abortive infection in Lactococcus species. The proteins are thought to have helix-turn-helix motifs, found in many DNA-binding proteins, allowing them to perform their function.	6.3507e-46
NZ_CP050810.1\|WP_159081052.1\|7591_7888_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	5.22771e-19
NZ_CP050810.1\|WP_108726135.1\|0_1143_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	7.57563e-157
NZ_CP050810.1\|WP_108726128.1\|12898_13795_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	5.04337e-58
NZ_CP050810.1\|WP_108726131.1\|7915_8119_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|281658	pfam03693, ParD_antitoxin, Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH. ParD is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is ParE in, pfam05016. The family contains several related antitoxins from Cyanobacteria, Proteobacteria and Actinobacteria. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all type II antitoxins.	1.63599e-22
NZ_CP050810.1\|WP_108726133.1\|2521_3454_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.15255e-124
NZ_CP050810.1\|WP_025296984.1\|12014_12890_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.73839e-62

>NZ_CP050810.1|WP_080754015.1|3458_3803_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MLVLTVTAVPAGLRGDLTKWLMEIAPGVFVGTPSARIREQIWARTVALCKDGRAIMVCSADNEQGMTFRTHRHDWEPADFDGLTLMIRPDGGQNSQNNQRRTGWSDARHLRKKY
>NZ_CP050810.1|WP_108726133.1|2521_3454_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTGNPSSTPLDRPLLTRMENRLSFLYVERAVINRDGNALTIQDSRGIAHVPATQIAVVLMGPGTRVTYAAMALLGDAGASAVWVGEKGVRYYAHGRPAAKTAKFAEAHAKIWSNQRSRLRCARRMYAKRFPDENIEHLTMAQLRGREGARMKTIYAVEAQRTGVQWTRRSYDPNDFESGDSINRALTEGSAALYGIAHAVIVGLGFIPALGIIHSGTDRAFVYDVADLYKAEISIPAAFEAVAESAQGDELNVRKRIRDKVVSARLMQRMVRDIQEVMEISEEDAYVDADLFLWNDLEVIPAGINWGSWG
>NZ_CP050810.1|WP_108726134.1|1850_2519_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MATFTRVQLNPARRQGQKYLNNPQALHAAVQASFPSDVVVKNERILWRLDQRGHQHTLYIVGPEMPTAAHIVEEAGWEVRPQETADYDRLLTRIQKDQEWNFELLANPTKTINRGRDRRGRVVAHLSILEQMKWLFRKAESLGVDFGSAEQPTFQVTESKTLNFTKMRGDGTERDRVHLVTARFTGSLKVVDSDRLRHGLVNGIGRAKGYGCGLLTLARGNV
>NZ_CP050810.1|WP_115324241.1|1146_1851_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MQHSLLLLLKGPLQSWGDESRYRTRATGSTPSKSGVIGLLASALGRERTAPLDDLVRLDFAVRVDQPGTLLHDYQTAQPWQKNPNDPAALVTRYFLADAAFVAAVGSEDRGELEGFHRALREPAYPLFLGRRSCPAPARLDLGIVDKPVVDALLDHDVWHATATHKKESARQVELPIYRDGKPGEIGVARQDVPVSFAQRRREYDWRTVVFAGSKIIQNGKSMNRDPYFDEVIS
>NZ_CP050810.1|WP_108726135.1|0_1143_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTLVIDIHALQTVPPSLINRDDTGAPKSAIFGGVPRQRVSSQAWKRAIRRYFENEIGQEAVGLRSRNLPEVIVNRVMEISPEFGLEEAIEGVQNLFKAPGAKQGIKLVEPKVSKDGEDSDNQSPYPTTAALLFLSPHQIERAAQAIVDADGEKITKAEATDILDTKHSVDMAMFGRMLADAPAFNIDASVQVAHAIGVHESEPEFDYYTAVDDVLEDAEEIGAGMIGTTQMMSSTLYRFATINVEGLATNLGNMDMANKAAVLFIKAFIESMPTGKQNSFANNTLPELVYVAVRNTRSVSLVNAFEDPVGREDSTRRRAAAEALAQEARDIEDIYGMKPLAAYVLATGELGEPFSGLAENVTFQKLSEKVGEVLATAKVE
>NZ_CP050810.1|WP_159081052.1|7591_7888_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MKLAFSPLAKVDLSNIRDHTEEKWGPCQAELYLRELQTSLESLTDFPLRDRLRKELESACRSLTGSQHVIFYRCEDDAVVVVRILQRHMDIDSRLSDS
>NZ_CP050810.1|WP_108726131.1|7915_8119_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MAIDTSVTLDDHFVEFLSAQVAGGRYASASEVVRAGLRLLEERETKLENLRVALHADEESGVLSPRL
>NZ_CP050810.1|WP_159081051.1|8266_9130_-|Abi-family-protein
MTAKPFLCLSQQAELLVQRGLIVADLCQLEDFLRVNNYYRFSGYAREFQESPREQKNAFVRGITLDRIRDLMELDRQLRQLILEALERIEVTTRSAFAYESGKTYGEGAFYLEKENYLDKTPDLEIHLNKIRSQLMRSGQPAVARYRDGDNLSRVPICVAVETLSFGTLAKICQYLRDDHAVKATADSLSIQKTSFSDTLHAFSNLRNRCAHYGQLWNRSFDIAFKVLPKEKKKAPTFKHPGSYGGILVIRRWLRSFDQSSDWFGRVTDLLEINSEYREGILNPRMK
>NZ_CP050810.1|WP_159081050.1|9383_9998_-|helix-turn-helix-domain-containing-protein
MDLNQIFARHLKAARKKRDITQEHLADLLGVSRQAVSKWENGDGYPEVEKLILLSRELRVSLDSLFALHVASGTDEAEANESTAEASVPTSPPYVRLIQPSERIAISSYDGEKLCLCYDVRATRSIGSGEIKYVLLAITEKGFWNRKEEIIGWYTDLDAVKKEIKAVHAAIAAGETRYQLQFFTPVEVKGMFGAPRVISESRES
>NZ_CP050810.1|WP_039662977.1|10263_11961_-|glycoside-hydrolase-family-13-protein
MSTFPSRHGDTASAEAPWWRQAVVYQIYPRSFADSNGDGLGDLKGITSRADYLAKLGVDAVWLSPFYPSELADGGYDVIDYRDVDPRLGTLADFDEMVAALHSRGINLIVDIVPNHTSNKHVWFQEALTAGRGSAARERYVFREGKGIDGAEPPTDWVSAFGGPAWTRVDDGQWYLHLFASEQPDLNWDNREVHEEFLTTLKFWSDRGVDGFRIDVAHALAKDLTEPLPSWEELKGIPTASGRHPLFDREELGQIYAEWRALFNLYDPPRTAVAEAWVDSTRVPRYASPQSLGQAFNFDLLEADFETEQFAPIIRHNLKLAEYSGSSSTWVLSNHDVVRHATRYGLPNPPRQPGNLTPDEKHGAAWLLTGGTDPMLERERGLRRARAATMLILGLPGSTYLYQGEELGLHEVAEIPAADRQDPTFFRTGQAEIGRDGCRVPLPWTQGGESFGFGDGPAHLPQPEWFNQCAAADGGAAGTLELYREALRLRREFQTAERLEWVESPDKTLRFRRPNGWEVLTNFGTEPIVLDEADAARVVLRSEPASPEVREAMAGESTVWLKPTN
>NZ_CP050810.1|WP_025296984.1|12014_12890_-|carbohydrate-ABC-transporter-permease
MSSAENTPGQGARRVKPGREKISWSTTIVLMLASVTVLLPLYVTITMAFKGTAQAVDGNAFSLPNPFSISGIVEAWRLTNFPVGAGISLAVTAGTVLATVILAAFASYAIVRNWDRKLFRYSFYYLLAAMFIPFPVVALPQIQLTGRVGLDNPLGVVILATMFQLSFSVMLFTAFLRSIPQSLEESARIDGASTWQTFWKIIFPMLAPMAATVAIFAFLYAWNDFMMPSLIISDPELQTLPVRQNLFQNQFSNNYNVAFASYMMAMAPAIVAYAFTQRWVMEGVTQGAVKG
>NZ_CP050810.1|WP_108726128.1|12898_13795_-|sugar-ABC-transporter-permease
MSTIIPASPKARKKRRTEPVYYFFLLPSVILFTLAITIPGLVGIFYSFTDSIGIGDWKFIGLTNYKALFSDPAILQAYLFTFGFAIVTVAVVNLVAFLLALGLTAKIRFTTTLRAIFVVPMVISGIIISYVFNFLFSNSLPALGEALGVSWLETSLLANPNLAWVAIVIVTAWQAIPSTMLIYIAGLLSVPGEVYEAAEIDGASTLQKLTRVTIPLVFGYVVINMILGLKNFLNAYDIIVGLTNGGPGTATRSIAMTIISGFNGGDYAYQMANATIFFFVAIVIALLQLSATRGRNEL
>NZ_CP050810.1|WP_114949731.1|13797_15072_-|extracellular-solute-binding-protein
MSLMNRLLRVAATAIAFALAAVSLAGCSTHSREDIRFTFSKREAIDFMQNVVNEYNSSQDRYNVKLDTSGVDVVSASFVRGNPPDLMLANYNFEVARFVERCALSDLSDTAAAKAADLATFGPLMAQYGECAGQISALPYSIMSSAVIYNKDIFAEHGLTVPHTWSELLDVANRLREAGIDPFYATFKDEWTVGQGWFDYAIGGSIDVGKFFGKLHEAGDRVGPQSAASFQDLAAPMEKMLKLSVYANRDAAARSYGDGNLAIAQGKAAMYLQGPWAFSEIAKSAPELNLGTFPLPMTEDPKDLAVRVNIDLALMVPADAKNPKGARDFLEYLYQPHIIHAYNASQLGFTPIVGAAAPEDPRVAGMIPYYDAGQIYQGPSVLIPKAIPVHNYAQAIIAEQNAQTYLATLDKDWSRLAYRQPKGD
>NZ_CP050810.1|WP_108726126.1|15156_16458_+|ROK-family-protein
MKPPQSTPSAWFDASVSDWPASHVAVLNYAWGRKEFTASDVMANTGLTRATSIDVLEVLADSGLIVELPNAREACPRAGATAHARVVGQVNAPAAIYRKGRPARRFSFDADAGLVVGVDAGCSHLTAIAADLSGQSVATAHSVAECDPDGDVCVLGPRRREQVRSLIAEAVKQAGRDPGDIYAVCVGVPAPVADDGRSPRHHAGFWQLVNPDLIDELADVGPVVRVENDALLAAVAEGTVGEARGQGSFVTLLAGARMGAGVVIDGHLLRGTHGAVGEMNAFDCVEGVGDTFGFGEYAAKAAAKEIAAGHVDGNGAFGGLAPEEVTGRLVFAAIEAGDADAQAIARDIGRRLARVVTVLQSFYDPAMIVVSGAVGPAMLKVIEEARAAMPDSGASIAPDVVGSRLGAEAVVTGAVAAAVQMACASALDIAVGK
>NZ_CP050810.1|WP_108726125.1|17559_20292_+|pyruvate,-phosphate-dikinase
MTKYVYDFTEGDKDQKDLLGGKGANLAEMTNLGLPVPPGFTITTEACRVYLTEGSAPEVLDVQVTSAIREVEAKMGKHLGDPKDPLLMSVRSGAKFSMPGMMETVLNIGLNDESVIGLAEQSGDERFAWDSYRRLLQMFGKTVLGIEGEPFAEALHALQEEKGYAGDPDMTTEDLQRLVVEFKAIVKESTGEDFPQNPRKQLDLAVVAVFNSWNTERARIYRRREHIPNDIGTAVNVQTMVFGNMGEGSGTGVCFTRDPSTGHSGVYGDYLENAQGEDVVAGIRNTLPLSALGEIDKKSYDELLAIMDRLETHYRDLCDIEFTVQRGKLWMLQTRVGKRTPAAAFRVADQLVDERLITRDEAVTRVTGDQLTSLLFPQFDKKAEKVTITRGMPASPGAAVGEIVMDNATAVARTQAGAKVVLVRRETNPEDLQGMVVSEGILTARGGKTSHAAVVARGMGRCCVVGADDLLVDEIAGTMKVKSSGKEFRVGDIIAIDGTTGEVFEGEVAVTDSPVTTYLAEGLEAGLAAASSDDDKDLVAAVDRIMTHADEKRRMLVRANADSPEDAQRARDFGAQGIGLCRTEHMFLGERRKLIEKMILAHDEETQAAALAELLPYQREDFIGIFGAMDGLPVTVRLIDPPLHEFLPDLTEISVSLAVKEAKGEEITAEERELLAAVKGHHEQNPMLGLRGVRLGLKIPGLIRLQVRAISEAAAQLKKEGKDPKPEIMVPLIGGVRELQIVRDMALEVIAEVSEETGVELDLPIGNMIELPRAAVSADTIAAESDFFSFGTNDLTQTTWGFSRDDVEGTFFNEYFDYGVFGVSPFESVDLGGVGALVDMGVQRGRHTKPDMKMGVCGEHGGDPSSIHFFEKVGLNYVSCSPFRVPVARLEAGRAAIENETTYERRFDHV

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Crispr_ID: NZ_CP050810_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050810_2

28425-28523

Orphan

Consensus_repeat	Method
GAGAAGGCCGCCCGAGAGGCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050810_2

>merge|NZ_CP050810|2|28425-28523|CRISPRCasFinder
GAGGCCGCCGAGCGGGAAGCCGCGCGTCTGGTGGAAAAGGCGAAGAACTCTACCGGAGCATCCAAGGCGAATGATGAGCGGGCAGCTAAGGAGGCCGCG

>NZ_CP050810|2|2|28425-28523|CRISPRCasFinder
GAGGCCGCCGAGCGGGAAGCCGC	GCGTCTGGTGGAAAAGGCGAAGAACTCTACCGGAGCATCCAAGGCGAATGAT
GAGCGGGCAGCTAAGGAGGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050810.1\|WP_114949731.1\|13797_15072_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP050810.1\|WP_114949728.1\|20547_23439_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP050810.1\|WP_108726128.1\|12898_13795_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP050810.1\|WP_108726120.1\|32214_33258_+\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP050810.1\|WP_024964647.1\|29240_29768_-\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|376376
NZ_CP050810.1\|WP_108726125.1\|17559_20292_+\|pyruvate,-phosphate-dikinase	unknown	unknown	gnl\|CDD\|236446
NZ_CP050810.1\|WP_108726126.1\|15156_16458_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP050810.1\|WP_025296984.1\|12014_12890_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP050810.1\|WP_108726913.1\|37320_38148_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|223872
NZ_CP050810.1\|WP_024964653.1\|35947_36511_+\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472
NZ_CP050810.1\|WP_108726121.1\|31351_32215_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274833
NZ_CP050810.1\|WP_053793249.1\|33812_35951_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl\|CDD\|273520
NZ_CP050810.1\|WP_025296990.1\|25988_27251_-\|homoserine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|234678
NZ_CP050810.1\|WP_024964651.1\|33254_33812_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_CP050810.1\|WP_114949726.1\|29836_31255_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|334815
NZ_CP050810.1\|WP_039662959.1\|36529_37309_+\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|238380
NZ_CP050810.1\|WP_025296998.1\|38161_38638_+\|DUF3180-domain-containing-protein	unknown	unknown	gnl\|CDD\|378650
NZ_CP050810.1\|WP_114949727.1\|23519_24905_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376177
NZ_CP050810.1\|WP_039662965.1\|24951_25956_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP050810.1\|WP_039662977.1\|10263_11961_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471

Protein	Function_ID	Function_description	E-value
NZ_CP050810.1\|WP_114949731.1\|13797_15072_-\|extracellular-solute-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.24268e-36
NZ_CP050810.1\|WP_114949728.1\|20547_23439_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	4.38124e-82
NZ_CP050810.1\|WP_108726128.1\|12898_13795_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	5.04337e-58
NZ_CP050810.1\|WP_108726120.1\|32214_33258_+\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	3.35034e-43
NZ_CP050810.1\|WP_024964647.1\|29240_29768_-\|inorganic-diphosphatase	gnl\|CDD\|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	3.9125e-79
NZ_CP050810.1\|WP_108726125.1\|17559_20292_+\|pyruvate,-phosphate-dikinase	gnl\|CDD\|236446	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.	0
NZ_CP050810.1\|WP_108726126.1\|15156_16458_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.74945e-31
NZ_CP050810.1\|WP_025296984.1\|12014_12890_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.73839e-62
NZ_CP050810.1\|WP_108726913.1\|37320_38148_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	4.91836e-56
NZ_CP050810.1\|WP_024964653.1\|35947_36511_+\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	8.18349e-111
NZ_CP050810.1\|WP_108726121.1\|31351_32215_+\|hypothetical-protein	gnl\|CDD\|274833	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated. A phylogenetic tree of the DUF2342 family (TIGR03624) consists of two major branches. One of these branches, modeled here, is observed almost entirely to be found in coenzyme F420 biosynthesizing species of the Actinobacterial, Chloroflexi and Archaeal lineages. The few organisms having genes within this family and lacking F420 biosynthesis may either have an undiscovered F420 transporter, or may represent F420-to-FMN revertants. This family includes a Chloroflexus Aurantiacus protein whose crystal structure has been determined (PDB:3CMN_A). This has been annotated as a putative hydrolase, but the support for that assertion is untraceable. There is no cofactor present in the structure.	3.00747e-71
NZ_CP050810.1\|WP_053793249.1\|33812_35951_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP050810.1\|WP_025296990.1\|25988_27251_-\|homoserine-O-acetyltransferase	gnl\|CDD\|234678	PRK00175, metX, homoserine O-acetyltransferase; Provisional.	3.34161e-169
NZ_CP050810.1\|WP_024964651.1\|33254_33812_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	4.44703e-85
NZ_CP050810.1\|WP_114949726.1\|29836_31255_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|334815	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family.	1.27873e-51
NZ_CP050810.1\|WP_039662959.1\|36529_37309_+\|dihydropteroate-synthase	gnl\|CDD\|238380	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.	1.50039e-100
NZ_CP050810.1\|WP_025296998.1\|38161_38638_+\|DUF3180-domain-containing-protein	gnl\|CDD\|378650	pfam11377, DUF3180, Protein of unknown function (DUF3180). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	1.91776e-23
NZ_CP050810.1\|WP_114949727.1\|23519_24905_+\|hypothetical-protein	gnl\|CDD\|376177	pfam18755, RAMA, Restriction Enzyme Adenine Methylase Associated. An alpha+beta fold domain associated with restriction enzymes across prokaryotes and fused to JAB deubiquitinases, and chromatin proteins in a wide range of eukaryotes. The domain is predicted to function as a modified-DNA reader domain.	6.71674e-06
NZ_CP050810.1\|WP_039662965.1\|24951_25956_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	7.22596e-31
NZ_CP050810.1\|WP_039662977.1\|10263_11961_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>NZ_CP050810.1|WP_025296990.1|25988_27251_-|homoserine-O-acetyltransferase
MTFNAYLPAYLVGYPPLTAVTDAAPVADFDTGYPPLCRTPLPASGAWREGDDPGERQFANIGPLQLELGGVLPAVTLAYETWGTLNADGTNAILLCHALTGDSHATSQDGHDGWWKDIVGPGKAIDTRRWYVVCPNVLGGCQGSTGPASLAPDGQPWGSRFPEITIRDMCDAEKRLAEHLGVERWALLAGASFGGNRVMEWAASYPDMSGAIAVLVAGAATTAEQIAYQKTQNQAIFLDPAFNGGNYYHLPDGAGPHRGLGLARELAHISYRSPVEFDERFGRSPQEGEDPLAGGRYAVSSYLDHHACKLASRFDANSYLRISQSMITHDIGRGRGGTQAAIARLIMPALVVSVDSDRLFYPAAMAALAEALPGSGPVRTVYSRYGHDGFLIENDQVAAILEEFLGGLNDAAESDVHRAG
>NZ_CP050810.1|WP_039662965.1|24951_25956_-|alpha/beta-hydrolase
MTWTPDFLGEGFYQQVLPLYDDDYGPNRAVLVTYLPTAPASFAVLAIHGWNDYFYHYEFAESISQMGGHFYALDLRKYGRSHIDGQMWGYVEDLSDYDEEIHAALDIITTEHGEDMPIFLYGHSTGGLTATLWADRHPGAIAGLILNSPWLEFQGHTAVRMAGQPVLETINKLAPTTIIPQPDDGYYQRLLTGFMSEEERAQLSEQDAADPFLREGGWNPDPRFRHMPTFPIRAGWLRAVTNGHERVAQGLDIRCPILVLTSAKTHYSDIWDDRMRHADTVLNVDQLWKRVPWLGDVVTLVKVPDAIHDVLLSRKSARDYSYKHIRTFVRSVLD
>NZ_CP050810.1|WP_114949727.1|23519_24905_+|hypothetical-protein
MGVFVLHDGRLVAPQQLVAEVSDDVCDAVRSQALEFIHYPLFGVGRSYESGTFLALDATGQVASIDFFDTLSSQAFMRALARAGRHSQMGRGALGQLYTGGSEAFDSDYRAFVDSAPPLTKPGPRLFLFSPHYEADVLRAISALRGAGVEAYQIFAHQGAQGLLVEIAKVMESPTVLPWAEEAAELMSESAQTADEEGGAEELISEPAPTVEPEPVIEPEPVVVWPKSAAAPEPAAASEPIQEVEEAVDRAQRYDEAWDISGWRYEKERPAKRDPSDLLYAVELRRASDEAKKAFSEEATSLLEKNRQDVGMTMYDLLLAESKRAEQRLWDMSAPKDRSATIFSERASSEASSEAVAQAAVKSDRWDSGLVPRPSAVSAPAPNPRLQRIVAQVGTVKVTWRSRRKHQALYGYLTSAGLIDIAGVGVFADPSEAAAKASGMDGVDGWSIWRVPDGRSLGDIA
>NZ_CP050810.1|WP_114949728.1|20547_23439_+|FAD-binding-oxidoreductase
MAPLTLAEAIAARIVGDVDASVRARAEYSTDASNYRVPPQVVVFPKNDDDVAAVLEICRERGVALTSRGGGTSVAGNAVGPGVVLDFSRHMNKILEIDPVARTARVQPGVVMSDLQAAAAVHGLRFGPDPSTQNRATLGGMIGNNACGPHAVAWGRTADNVLALECIDGAGRAFTAGSGSLGKGELGECLAALIGSHLADIRRHFGRFSRQVSGYSLEHLLPENGRDLAKMLVGSEGTLVVITQALLRLVPLAQAPTLVVLGYPDMPTAADAVPALLAHAPLAVEGIDAELVEVVRRKKGAVPALPAGGGWLFIEVGAQEGEDVAVVDRRVAAIVRDAGTADVVVCPPGPEAAELWRIRADGAGLGGRTPAGEAAWPGWEDSAVPPEKLGPYLRDLRGLMSAKGLDGLMYGHFGDGCVHVRIDFPLEEAGGVPLMRAFMEEATDIAMRYGGSMSGEHGDGRARSELLTRMYPPQILELFGAVKALFDPDDVLNPGVLVRPRPLDADLRRPQAAPSQYAGGFHFREDGGDFTRAVHRCTGVGNCRANRTAAGFYMCPSYQATKDEKDVTRGRARVLQEVTNGQLVSGFADSALHEALDLCLACKACSTDCPTGVNLAKFKSEALYRGYRGKIRPRTHYILGNLPILARWATAIPGLAALANALMKIGPIRKIAFAASGLDTRRSWPGFATTRFSTHAKSLRKETRGLVGQAAMGEKKYVMLWVDSFSETLDTRGAQAMVAVLQRAGYTVLIPPADACCGLTWITTGQLGHAKKELTHLLGLLAPFAASGIPIVGVEPSCTAVLREDLLDLLPDDARSAVVAHMTHTLAELLTAPEPIGPGEDWQVPDLSGVEVVAQPHCHHYSVMGWRADAELLRRAGAQLTTVSGCCGLAGNFGMEKGHYDVSVKVAHNDLLPKLAAASPDAVYLADGFSCRTQAAGLVGDQGVHLAELLRDGAGVRRKSHTS
>NZ_CP050810.1|WP_108726125.1|17559_20292_+|pyruvate,-phosphate-dikinase
MTKYVYDFTEGDKDQKDLLGGKGANLAEMTNLGLPVPPGFTITTEACRVYLTEGSAPEVLDVQVTSAIREVEAKMGKHLGDPKDPLLMSVRSGAKFSMPGMMETVLNIGLNDESVIGLAEQSGDERFAWDSYRRLLQMFGKTVLGIEGEPFAEALHALQEEKGYAGDPDMTTEDLQRLVVEFKAIVKESTGEDFPQNPRKQLDLAVVAVFNSWNTERARIYRRREHIPNDIGTAVNVQTMVFGNMGEGSGTGVCFTRDPSTGHSGVYGDYLENAQGEDVVAGIRNTLPLSALGEIDKKSYDELLAIMDRLETHYRDLCDIEFTVQRGKLWMLQTRVGKRTPAAAFRVADQLVDERLITRDEAVTRVTGDQLTSLLFPQFDKKAEKVTITRGMPASPGAAVGEIVMDNATAVARTQAGAKVVLVRRETNPEDLQGMVVSEGILTARGGKTSHAAVVARGMGRCCVVGADDLLVDEIAGTMKVKSSGKEFRVGDIIAIDGTTGEVFEGEVAVTDSPVTTYLAEGLEAGLAAASSDDDKDLVAAVDRIMTHADEKRRMLVRANADSPEDAQRARDFGAQGIGLCRTEHMFLGERRKLIEKMILAHDEETQAAALAELLPYQREDFIGIFGAMDGLPVTVRLIDPPLHEFLPDLTEISVSLAVKEAKGEEITAEERELLAAVKGHHEQNPMLGLRGVRLGLKIPGLIRLQVRAISEAAAQLKKEGKDPKPEIMVPLIGGVRELQIVRDMALEVIAEVSEETGVELDLPIGNMIELPRAAVSADTIAAESDFFSFGTNDLTQTTWGFSRDDVEGTFFNEYFDYGVFGVSPFESVDLGGVGALVDMGVQRGRHTKPDMKMGVCGEHGGDPSSIHFFEKVGLNYVSCSPFRVPVARLEAGRAAIENETTYERRFDHV
>NZ_CP050810.1|WP_108726126.1|15156_16458_+|ROK-family-protein
MKPPQSTPSAWFDASVSDWPASHVAVLNYAWGRKEFTASDVMANTGLTRATSIDVLEVLADSGLIVELPNAREACPRAGATAHARVVGQVNAPAAIYRKGRPARRFSFDADAGLVVGVDAGCSHLTAIAADLSGQSVATAHSVAECDPDGDVCVLGPRRREQVRSLIAEAVKQAGRDPGDIYAVCVGVPAPVADDGRSPRHHAGFWQLVNPDLIDELADVGPVVRVENDALLAAVAEGTVGEARGQGSFVTLLAGARMGAGVVIDGHLLRGTHGAVGEMNAFDCVEGVGDTFGFGEYAAKAAAKEIAAGHVDGNGAFGGLAPEEVTGRLVFAAIEAGDADAQAIARDIGRRLARVVTVLQSFYDPAMIVVSGAVGPAMLKVIEEARAAMPDSGASIAPDVVGSRLGAEAVVTGAVAAAVQMACASALDIAVGK
>NZ_CP050810.1|WP_114949731.1|13797_15072_-|extracellular-solute-binding-protein
MSLMNRLLRVAATAIAFALAAVSLAGCSTHSREDIRFTFSKREAIDFMQNVVNEYNSSQDRYNVKLDTSGVDVVSASFVRGNPPDLMLANYNFEVARFVERCALSDLSDTAAAKAADLATFGPLMAQYGECAGQISALPYSIMSSAVIYNKDIFAEHGLTVPHTWSELLDVANRLREAGIDPFYATFKDEWTVGQGWFDYAIGGSIDVGKFFGKLHEAGDRVGPQSAASFQDLAAPMEKMLKLSVYANRDAAARSYGDGNLAIAQGKAAMYLQGPWAFSEIAKSAPELNLGTFPLPMTEDPKDLAVRVNIDLALMVPADAKNPKGARDFLEYLYQPHIIHAYNASQLGFTPIVGAAAPEDPRVAGMIPYYDAGQIYQGPSVLIPKAIPVHNYAQAIIAEQNAQTYLATLDKDWSRLAYRQPKGD
>NZ_CP050810.1|WP_108726128.1|12898_13795_-|sugar-ABC-transporter-permease
MSTIIPASPKARKKRRTEPVYYFFLLPSVILFTLAITIPGLVGIFYSFTDSIGIGDWKFIGLTNYKALFSDPAILQAYLFTFGFAIVTVAVVNLVAFLLALGLTAKIRFTTTLRAIFVVPMVISGIIISYVFNFLFSNSLPALGEALGVSWLETSLLANPNLAWVAIVIVTAWQAIPSTMLIYIAGLLSVPGEVYEAAEIDGASTLQKLTRVTIPLVFGYVVINMILGLKNFLNAYDIIVGLTNGGPGTATRSIAMTIISGFNGGDYAYQMANATIFFFVAIVIALLQLSATRGRNEL
>NZ_CP050810.1|WP_025296984.1|12014_12890_-|carbohydrate-ABC-transporter-permease
MSSAENTPGQGARRVKPGREKISWSTTIVLMLASVTVLLPLYVTITMAFKGTAQAVDGNAFSLPNPFSISGIVEAWRLTNFPVGAGISLAVTAGTVLATVILAAFASYAIVRNWDRKLFRYSFYYLLAAMFIPFPVVALPQIQLTGRVGLDNPLGVVILATMFQLSFSVMLFTAFLRSIPQSLEESARIDGASTWQTFWKIIFPMLAPMAATVAIFAFLYAWNDFMMPSLIISDPELQTLPVRQNLFQNQFSNNYNVAFASYMMAMAPAIVAYAFTQRWVMEGVTQGAVKG
>NZ_CP050810.1|WP_039662977.1|10263_11961_-|glycoside-hydrolase-family-13-protein
MSTFPSRHGDTASAEAPWWRQAVVYQIYPRSFADSNGDGLGDLKGITSRADYLAKLGVDAVWLSPFYPSELADGGYDVIDYRDVDPRLGTLADFDEMVAALHSRGINLIVDIVPNHTSNKHVWFQEALTAGRGSAARERYVFREGKGIDGAEPPTDWVSAFGGPAWTRVDDGQWYLHLFASEQPDLNWDNREVHEEFLTTLKFWSDRGVDGFRIDVAHALAKDLTEPLPSWEELKGIPTASGRHPLFDREELGQIYAEWRALFNLYDPPRTAVAEAWVDSTRVPRYASPQSLGQAFNFDLLEADFETEQFAPIIRHNLKLAEYSGSSSTWVLSNHDVVRHATRYGLPNPPRQPGNLTPDEKHGAAWLLTGGTDPMLERERGLRRARAATMLILGLPGSTYLYQGEELGLHEVAEIPAADRQDPTFFRTGQAEIGRDGCRVPLPWTQGGESFGFGDGPAHLPQPEWFNQCAAADGGAAGTLELYREALRLRREFQTAERLEWVESPDKTLRFRRPNGWEVLTNFGTEPIVLDEADAARVVLRSEPASPEVREAMAGESTVWLKPTN
>NZ_CP050810.1|WP_024964647.1|29240_29768_-|inorganic-diphosphatase
MDFDVTIEIPKGNRNKYEVDHETGRIRLDRMLFTSTRYPDDYGFIDGTLGEDGDPLDALVLLDEPTFPGCVIRCRALGMFRMKDEAGGDDKVVCVPTGDQRASWRTELEDISEFHRLEIQHFFEVYKDLEPGKSVEGAHWVGREETEQEIRRSFQRAIDTGYYEHNPSLHPDNMK
>NZ_CP050810.1|WP_114949726.1|29836_31255_+|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MGRRAHLPTSWPNVWEDDDVWKRIVALLLAITVGGYLFADAWDLVPGPLTTKPTLPEPLPYPTLSQVTAHAPEPDEQASPAAANPPSPTGVAALISALANAENNTGKASVIVADPLTGKTIASYNPDRPTIPASNMKIVTARAALDVLGPENTLPTVVAAQGSTLYLVGGGDVLLAEGAGDPRATRGRAGLADLAGAVVDKLSGSVTQVNLVVDSSLFEGPQYFTDIEGVDRGYVMELRPLAVDRGRVQGRGYLPNPDLLAGEAFAEHLRAAGLGVGEVKRGTVANDAVELARVESAPVRELVDLLLTESDNSLSEVMGHLVAKAKGKPATFAGSAAAIGEVMAAAGYPMKGVTLGDASGLSRLNRVTAELLTAILLDTWKCQECRFAALPAGLPVSALNGTLTQRFGGTAVAGQVRAKTGTLVEAISLSGYLRTEAGYPLVFSIMLDELEPGTAPSSRTLIDTLVTGLAKL
>NZ_CP050810.1|WP_108726121.1|31351_32215_+|hypothetical-protein
MVNHEKVYRFARMLAGGGPADTPAQARALVADLRTQALRAPDIVADATRLMGEQSPDVKVVDRPTWAAAAAVWIDTMLPGKDVLDTFQGSLVLSAVSTKVLGQFDPFAEPARLYLVAPNISAFRAAYDLDRRDLSLWVAVHEFTHAVQFAAAPWLRGLLMSKASELCDALGEDSAHGLLDDVTAVMSLLEGHAEYVMNNVPVTHIRSRQRIVDAMAAQRAAANPVANLLLTRLGLPDKRRQYAAGESFVAGVVGRRGMEFFNRVWQRPENLPTQAELSDPDAWIERV
>NZ_CP050810.1|WP_108726120.1|32214_33258_+|tRNA-lysidine(34)-synthetase-TilS
MSFPHPAVTAARRAMTAALASVPDGGAVLLAVSGGSDSMAMTKVAMWAARGRIEVLSATVDHGLRPESGAEALAVDRYLRRILDTSIVTRIDVLASGGEGPEGNARNARYDRLADIARAGGRLKGTGPLTVFLGHTADDQAETVLMGLGRGSGPRSIAGMRQRAALPGHDDVPMVRPYLHMRRADLRVVCSQLDIPWLDDPSNHIDGPWRAADGSPLRRSEIRHRALPALDTALGGGVTDALARTATMIRDDDDLLTSLAAHVRKQVTSPDGVVVKELARQPRALRTRVLREILAEVGDRAGDIVYRHIDALDRLVCGADNNRELDLPGAHASRRADLLTIKRAEKS
>NZ_CP050810.1|WP_024964651.1|33254_33812_+|hypoxanthine-phosphoribosyltransferase
MNLDDCKDDLVKVVVTEEQINQRLAEMGKQISDDYRGDDSLLLVGVLRGAIMVMADLSRHISIPLHMDWMAVSSYGASTKTSGVVRILKDLDTELEGRSVLIVEDIIDSGLTLDWLLKNLESRGAKSVKIATLLRKPEAAKVDVDVEYVGFDIPNEFVVGYGLDYAEDYRHLPFVGVLAPHVYGG
>NZ_CP050810.1|WP_053793249.1|33812_35951_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MSDRKRRRLEEFNRKGRKAKAKASSDSGKDPRKLREQREKEERERKQRRIFWAIMGLLVTGAAVIFFFFNPSGFTSVKTSEGREILQSQSIDRIQVTDGTQIVQIWLAEKYKPTDLEGEEQSPTKKVQFQYTDPEANDVLALVAKADSKNGYNSIVPQQSAFFSLLTFILPMLIVLAIFFWMIPRMQGRMNEFGRVKRDGVESDLPDVTFADVAGADEAVEELREIKEFIETPEKFRKMGAKIPRGVLLYGPPGTGKTLLAKAVAGEAGVPFFHISASEFVEMFVGVGASRVRDLFTKAKKVAPAIIFVDEIDAVGRNRGSGIGGGNDEREQTLNQLLVEMDGFDERTNVIVIAATNRPDVLDPALLRPGRFDRQIGVDAPDLSGREQILKVHADGKPLAAAISLESIARRTPGFSGADLANLLNEAALLAARRGHTKIDEDDVDEAIDRVIAGPQRRTRVMNPKEKRMTAYHEAGHAVAAAALNHSAPVTKVTILPRGRALGYTMVIPTEDRYSTSRHELLDEMVYAMGGRAAEEVVFHDPTTGASNDIQKATNVARKMVTEYGMSQRVGAVRLVADESDPMTRMGGGNSREHSDQLARVVDDEVHALLDRAAQEAWQIMMDNRHVLDRLTTVLLEKETVLEEELKVIFQDIVKAPPRDLWLSSPDRPVSDLPPVPLPETEASAEEPTVLPGQETEEGKHVDLEPGDKADQ
>NZ_CP050810.1|WP_024964653.1|35947_36511_+|GTP-cyclohydrolase-I-FolE
MIDSARAQAAVRELLLAIGEDPDRDGLKDTPARVARSYAEIFSGLGEDPGSHLEKVFDVGHQELVLVRDIPVYSMCEHHLLPFHGVAHVGYIPGPDGRVTGLSKLARLVEGFAHRPQVQERLTTQVADTLAERIGADGVIVVVEAEHLCMSMRGVRKPGSRTVTSAVRGSLHDPATRAEAMSLIMAG
>NZ_CP050810.1|WP_039662959.1|36529_37309_+|dihydropteroate-synthase
MLVMGILNVTPNSFSDGGQFLQTDAAIDHGRELIAHGATILDIGGESTRPGAEPVEPAQEWERIADVVAELSDEITVSVDTYHAATARAAVAAGAQIVNDVTGGHGDMDMLATVAELDCDYILQHGRGNAQTMNSLASYDDVVAEVRSELLASRDAAVAAGIAPERIILDPGLGFAKVGDHDWRILRGLKAFCGEGHRLLIGQSRKRFLAPVTVADERDVATAVISAMLAQTDVWGVRVHNVAATATAIATMEMLRSQA
>NZ_CP050810.1|WP_108726913.1|37320_38148_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MELTGLRARGTHGVLDFEHSQAQDFVVDVTLFLDITRATATDNIDDTISYAEVADVARSIIEGEHADLIETLAHRIATRVKALGAEGVAVTVHKPQAPIPHEFADVAVTIEEWDTDAIAVVSIGANLDDPAHHVRSAISQIGEITEVIAASQLYRTAPRLAEGQEGQPDYVNAVVIVETGLNPHELLEKLQAIEAGHGRVRDERWGPRTLDLDIITYSDLTLDDPDLTLPHPRAAGRRFVLEPWFSIDPDAELAGHDIRSLLAKLGDQRVELYED
>NZ_CP050810.1|WP_025296998.1|38161_38638_+|DUF3180-domain-containing-protein
MSGKLRPTPISMLLGIAVVTGVTVFSLVSVVIRSGMNPADVPFWLFLVPIAIGTIMISQAWLVRQYRLGRRPVDQLYAARIWVLTQATSRGGAILAGGAFGVAVAYYMGGPTSFLTENAFNALLAGIGSVVMTILALVGERWCMHDDGSPEASEGAGA

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Crispr_ID: NZ_CP050810_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050810_3

28623-28801

Orphan

Consensus_repeat	Method
GAGAAGGCCGCCCGAGAGGCCGC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP050810_3

>merge|NZ_CP050810|3|28623-28801|CRISPRCasFinder
GAGAAGGCCGCCGCAGAACGAGCGGCTGCCGAGAAGGCACAGAAGGATGCTGCTGACAGGCAGGCTCGCGAGAAGGCTGAGCGGGAAGCCGCCGCCAAGGCTGAAGCAGAGAAGGCCGCCCGAGAGGCCGCTGCCCAAGCCGAACGAGAGGCAGCCGAGAAGGCCGCCCGAGAGGCCGC

>NZ_CP050810|3|3|28623-28801|CRISPRCasFinder
GAGAAGGCCGCCGCAGAACGAGC	GGCTGCCGAGAAGGCACAGAAGGATGCTGCTGACAGGCAGGCTCGC
GAGAAGGCTGAGCGGGAAGCCGC	CGCCAAGGCTGAAGCA
GAGAAGGCCGCCCGAGAGGCCGC	TGCCCAAGCCGAACGAGAGGCAGCC
GAGAAGGCCGCCCGAGAGGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050810.1\|WP_114949731.1\|13797_15072_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP050810.1\|WP_114949728.1\|20547_23439_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP050810.1\|WP_108726128.1\|12898_13795_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP050810.1\|WP_108726120.1\|32214_33258_+\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP050810.1\|WP_024964647.1\|29240_29768_-\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|376376
NZ_CP050810.1\|WP_108726125.1\|17559_20292_+\|pyruvate,-phosphate-dikinase	unknown	unknown	gnl\|CDD\|236446
NZ_CP050810.1\|WP_108726126.1\|15156_16458_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP050810.1\|WP_025296984.1\|12014_12890_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP050810.1\|WP_108726913.1\|37320_38148_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|223872
NZ_CP050810.1\|WP_024964653.1\|35947_36511_+\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472
NZ_CP050810.1\|WP_108726121.1\|31351_32215_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274833
NZ_CP050810.1\|WP_053793249.1\|33812_35951_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl\|CDD\|273520
NZ_CP050810.1\|WP_025296990.1\|25988_27251_-\|homoserine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|234678
NZ_CP050810.1\|WP_024964651.1\|33254_33812_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_CP050810.1\|WP_114949726.1\|29836_31255_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|334815
NZ_CP050810.1\|WP_039662959.1\|36529_37309_+\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|238380
NZ_CP050810.1\|WP_025296998.1\|38161_38638_+\|DUF3180-domain-containing-protein	unknown	unknown	gnl\|CDD\|378650
NZ_CP050810.1\|WP_114949727.1\|23519_24905_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376177
NZ_CP050810.1\|WP_039662965.1\|24951_25956_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP050810.1\|WP_039662977.1\|10263_11961_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471

Protein	Function_ID	Function_description	E-value
NZ_CP050810.1\|WP_114949731.1\|13797_15072_-\|extracellular-solute-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.24268e-36
NZ_CP050810.1\|WP_114949728.1\|20547_23439_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	4.38124e-82
NZ_CP050810.1\|WP_108726128.1\|12898_13795_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	5.04337e-58
NZ_CP050810.1\|WP_108726120.1\|32214_33258_+\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	3.35034e-43
NZ_CP050810.1\|WP_024964647.1\|29240_29768_-\|inorganic-diphosphatase	gnl\|CDD\|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	3.9125e-79
NZ_CP050810.1\|WP_108726125.1\|17559_20292_+\|pyruvate,-phosphate-dikinase	gnl\|CDD\|236446	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.	0
NZ_CP050810.1\|WP_108726126.1\|15156_16458_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.74945e-31
NZ_CP050810.1\|WP_025296984.1\|12014_12890_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.73839e-62
NZ_CP050810.1\|WP_108726913.1\|37320_38148_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	4.91836e-56
NZ_CP050810.1\|WP_024964653.1\|35947_36511_+\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	8.18349e-111
NZ_CP050810.1\|WP_108726121.1\|31351_32215_+\|hypothetical-protein	gnl\|CDD\|274833	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated. A phylogenetic tree of the DUF2342 family (TIGR03624) consists of two major branches. One of these branches, modeled here, is observed almost entirely to be found in coenzyme F420 biosynthesizing species of the Actinobacterial, Chloroflexi and Archaeal lineages. The few organisms having genes within this family and lacking F420 biosynthesis may either have an undiscovered F420 transporter, or may represent F420-to-FMN revertants. This family includes a Chloroflexus Aurantiacus protein whose crystal structure has been determined (PDB:3CMN_A). This has been annotated as a putative hydrolase, but the support for that assertion is untraceable. There is no cofactor present in the structure.	3.00747e-71
NZ_CP050810.1\|WP_053793249.1\|33812_35951_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP050810.1\|WP_025296990.1\|25988_27251_-\|homoserine-O-acetyltransferase	gnl\|CDD\|234678	PRK00175, metX, homoserine O-acetyltransferase; Provisional.	3.34161e-169
NZ_CP050810.1\|WP_024964651.1\|33254_33812_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	4.44703e-85
NZ_CP050810.1\|WP_114949726.1\|29836_31255_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|334815	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family.	1.27873e-51
NZ_CP050810.1\|WP_039662959.1\|36529_37309_+\|dihydropteroate-synthase	gnl\|CDD\|238380	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.	1.50039e-100
NZ_CP050810.1\|WP_025296998.1\|38161_38638_+\|DUF3180-domain-containing-protein	gnl\|CDD\|378650	pfam11377, DUF3180, Protein of unknown function (DUF3180). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	1.91776e-23
NZ_CP050810.1\|WP_114949727.1\|23519_24905_+\|hypothetical-protein	gnl\|CDD\|376177	pfam18755, RAMA, Restriction Enzyme Adenine Methylase Associated. An alpha+beta fold domain associated with restriction enzymes across prokaryotes and fused to JAB deubiquitinases, and chromatin proteins in a wide range of eukaryotes. The domain is predicted to function as a modified-DNA reader domain.	6.71674e-06
NZ_CP050810.1\|WP_039662965.1\|24951_25956_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	7.22596e-31
NZ_CP050810.1\|WP_039662977.1\|10263_11961_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>NZ_CP050810.1|WP_025296990.1|25988_27251_-|homoserine-O-acetyltransferase
MTFNAYLPAYLVGYPPLTAVTDAAPVADFDTGYPPLCRTPLPASGAWREGDDPGERQFANIGPLQLELGGVLPAVTLAYETWGTLNADGTNAILLCHALTGDSHATSQDGHDGWWKDIVGPGKAIDTRRWYVVCPNVLGGCQGSTGPASLAPDGQPWGSRFPEITIRDMCDAEKRLAEHLGVERWALLAGASFGGNRVMEWAASYPDMSGAIAVLVAGAATTAEQIAYQKTQNQAIFLDPAFNGGNYYHLPDGAGPHRGLGLARELAHISYRSPVEFDERFGRSPQEGEDPLAGGRYAVSSYLDHHACKLASRFDANSYLRISQSMITHDIGRGRGGTQAAIARLIMPALVVSVDSDRLFYPAAMAALAEALPGSGPVRTVYSRYGHDGFLIENDQVAAILEEFLGGLNDAAESDVHRAG
>NZ_CP050810.1|WP_039662965.1|24951_25956_-|alpha/beta-hydrolase
MTWTPDFLGEGFYQQVLPLYDDDYGPNRAVLVTYLPTAPASFAVLAIHGWNDYFYHYEFAESISQMGGHFYALDLRKYGRSHIDGQMWGYVEDLSDYDEEIHAALDIITTEHGEDMPIFLYGHSTGGLTATLWADRHPGAIAGLILNSPWLEFQGHTAVRMAGQPVLETINKLAPTTIIPQPDDGYYQRLLTGFMSEEERAQLSEQDAADPFLREGGWNPDPRFRHMPTFPIRAGWLRAVTNGHERVAQGLDIRCPILVLTSAKTHYSDIWDDRMRHADTVLNVDQLWKRVPWLGDVVTLVKVPDAIHDVLLSRKSARDYSYKHIRTFVRSVLD
>NZ_CP050810.1|WP_114949727.1|23519_24905_+|hypothetical-protein
MGVFVLHDGRLVAPQQLVAEVSDDVCDAVRSQALEFIHYPLFGVGRSYESGTFLALDATGQVASIDFFDTLSSQAFMRALARAGRHSQMGRGALGQLYTGGSEAFDSDYRAFVDSAPPLTKPGPRLFLFSPHYEADVLRAISALRGAGVEAYQIFAHQGAQGLLVEIAKVMESPTVLPWAEEAAELMSESAQTADEEGGAEELISEPAPTVEPEPVIEPEPVVVWPKSAAAPEPAAASEPIQEVEEAVDRAQRYDEAWDISGWRYEKERPAKRDPSDLLYAVELRRASDEAKKAFSEEATSLLEKNRQDVGMTMYDLLLAESKRAEQRLWDMSAPKDRSATIFSERASSEASSEAVAQAAVKSDRWDSGLVPRPSAVSAPAPNPRLQRIVAQVGTVKVTWRSRRKHQALYGYLTSAGLIDIAGVGVFADPSEAAAKASGMDGVDGWSIWRVPDGRSLGDIA
>NZ_CP050810.1|WP_114949728.1|20547_23439_+|FAD-binding-oxidoreductase
MAPLTLAEAIAARIVGDVDASVRARAEYSTDASNYRVPPQVVVFPKNDDDVAAVLEICRERGVALTSRGGGTSVAGNAVGPGVVLDFSRHMNKILEIDPVARTARVQPGVVMSDLQAAAAVHGLRFGPDPSTQNRATLGGMIGNNACGPHAVAWGRTADNVLALECIDGAGRAFTAGSGSLGKGELGECLAALIGSHLADIRRHFGRFSRQVSGYSLEHLLPENGRDLAKMLVGSEGTLVVITQALLRLVPLAQAPTLVVLGYPDMPTAADAVPALLAHAPLAVEGIDAELVEVVRRKKGAVPALPAGGGWLFIEVGAQEGEDVAVVDRRVAAIVRDAGTADVVVCPPGPEAAELWRIRADGAGLGGRTPAGEAAWPGWEDSAVPPEKLGPYLRDLRGLMSAKGLDGLMYGHFGDGCVHVRIDFPLEEAGGVPLMRAFMEEATDIAMRYGGSMSGEHGDGRARSELLTRMYPPQILELFGAVKALFDPDDVLNPGVLVRPRPLDADLRRPQAAPSQYAGGFHFREDGGDFTRAVHRCTGVGNCRANRTAAGFYMCPSYQATKDEKDVTRGRARVLQEVTNGQLVSGFADSALHEALDLCLACKACSTDCPTGVNLAKFKSEALYRGYRGKIRPRTHYILGNLPILARWATAIPGLAALANALMKIGPIRKIAFAASGLDTRRSWPGFATTRFSTHAKSLRKETRGLVGQAAMGEKKYVMLWVDSFSETLDTRGAQAMVAVLQRAGYTVLIPPADACCGLTWITTGQLGHAKKELTHLLGLLAPFAASGIPIVGVEPSCTAVLREDLLDLLPDDARSAVVAHMTHTLAELLTAPEPIGPGEDWQVPDLSGVEVVAQPHCHHYSVMGWRADAELLRRAGAQLTTVSGCCGLAGNFGMEKGHYDVSVKVAHNDLLPKLAAASPDAVYLADGFSCRTQAAGLVGDQGVHLAELLRDGAGVRRKSHTS
>NZ_CP050810.1|WP_108726125.1|17559_20292_+|pyruvate,-phosphate-dikinase
MTKYVYDFTEGDKDQKDLLGGKGANLAEMTNLGLPVPPGFTITTEACRVYLTEGSAPEVLDVQVTSAIREVEAKMGKHLGDPKDPLLMSVRSGAKFSMPGMMETVLNIGLNDESVIGLAEQSGDERFAWDSYRRLLQMFGKTVLGIEGEPFAEALHALQEEKGYAGDPDMTTEDLQRLVVEFKAIVKESTGEDFPQNPRKQLDLAVVAVFNSWNTERARIYRRREHIPNDIGTAVNVQTMVFGNMGEGSGTGVCFTRDPSTGHSGVYGDYLENAQGEDVVAGIRNTLPLSALGEIDKKSYDELLAIMDRLETHYRDLCDIEFTVQRGKLWMLQTRVGKRTPAAAFRVADQLVDERLITRDEAVTRVTGDQLTSLLFPQFDKKAEKVTITRGMPASPGAAVGEIVMDNATAVARTQAGAKVVLVRRETNPEDLQGMVVSEGILTARGGKTSHAAVVARGMGRCCVVGADDLLVDEIAGTMKVKSSGKEFRVGDIIAIDGTTGEVFEGEVAVTDSPVTTYLAEGLEAGLAAASSDDDKDLVAAVDRIMTHADEKRRMLVRANADSPEDAQRARDFGAQGIGLCRTEHMFLGERRKLIEKMILAHDEETQAAALAELLPYQREDFIGIFGAMDGLPVTVRLIDPPLHEFLPDLTEISVSLAVKEAKGEEITAEERELLAAVKGHHEQNPMLGLRGVRLGLKIPGLIRLQVRAISEAAAQLKKEGKDPKPEIMVPLIGGVRELQIVRDMALEVIAEVSEETGVELDLPIGNMIELPRAAVSADTIAAESDFFSFGTNDLTQTTWGFSRDDVEGTFFNEYFDYGVFGVSPFESVDLGGVGALVDMGVQRGRHTKPDMKMGVCGEHGGDPSSIHFFEKVGLNYVSCSPFRVPVARLEAGRAAIENETTYERRFDHV
>NZ_CP050810.1|WP_108726126.1|15156_16458_+|ROK-family-protein
MKPPQSTPSAWFDASVSDWPASHVAVLNYAWGRKEFTASDVMANTGLTRATSIDVLEVLADSGLIVELPNAREACPRAGATAHARVVGQVNAPAAIYRKGRPARRFSFDADAGLVVGVDAGCSHLTAIAADLSGQSVATAHSVAECDPDGDVCVLGPRRREQVRSLIAEAVKQAGRDPGDIYAVCVGVPAPVADDGRSPRHHAGFWQLVNPDLIDELADVGPVVRVENDALLAAVAEGTVGEARGQGSFVTLLAGARMGAGVVIDGHLLRGTHGAVGEMNAFDCVEGVGDTFGFGEYAAKAAAKEIAAGHVDGNGAFGGLAPEEVTGRLVFAAIEAGDADAQAIARDIGRRLARVVTVLQSFYDPAMIVVSGAVGPAMLKVIEEARAAMPDSGASIAPDVVGSRLGAEAVVTGAVAAAVQMACASALDIAVGK
>NZ_CP050810.1|WP_114949731.1|13797_15072_-|extracellular-solute-binding-protein
MSLMNRLLRVAATAIAFALAAVSLAGCSTHSREDIRFTFSKREAIDFMQNVVNEYNSSQDRYNVKLDTSGVDVVSASFVRGNPPDLMLANYNFEVARFVERCALSDLSDTAAAKAADLATFGPLMAQYGECAGQISALPYSIMSSAVIYNKDIFAEHGLTVPHTWSELLDVANRLREAGIDPFYATFKDEWTVGQGWFDYAIGGSIDVGKFFGKLHEAGDRVGPQSAASFQDLAAPMEKMLKLSVYANRDAAARSYGDGNLAIAQGKAAMYLQGPWAFSEIAKSAPELNLGTFPLPMTEDPKDLAVRVNIDLALMVPADAKNPKGARDFLEYLYQPHIIHAYNASQLGFTPIVGAAAPEDPRVAGMIPYYDAGQIYQGPSVLIPKAIPVHNYAQAIIAEQNAQTYLATLDKDWSRLAYRQPKGD
>NZ_CP050810.1|WP_108726128.1|12898_13795_-|sugar-ABC-transporter-permease
MSTIIPASPKARKKRRTEPVYYFFLLPSVILFTLAITIPGLVGIFYSFTDSIGIGDWKFIGLTNYKALFSDPAILQAYLFTFGFAIVTVAVVNLVAFLLALGLTAKIRFTTTLRAIFVVPMVISGIIISYVFNFLFSNSLPALGEALGVSWLETSLLANPNLAWVAIVIVTAWQAIPSTMLIYIAGLLSVPGEVYEAAEIDGASTLQKLTRVTIPLVFGYVVINMILGLKNFLNAYDIIVGLTNGGPGTATRSIAMTIISGFNGGDYAYQMANATIFFFVAIVIALLQLSATRGRNEL
>NZ_CP050810.1|WP_025296984.1|12014_12890_-|carbohydrate-ABC-transporter-permease
MSSAENTPGQGARRVKPGREKISWSTTIVLMLASVTVLLPLYVTITMAFKGTAQAVDGNAFSLPNPFSISGIVEAWRLTNFPVGAGISLAVTAGTVLATVILAAFASYAIVRNWDRKLFRYSFYYLLAAMFIPFPVVALPQIQLTGRVGLDNPLGVVILATMFQLSFSVMLFTAFLRSIPQSLEESARIDGASTWQTFWKIIFPMLAPMAATVAIFAFLYAWNDFMMPSLIISDPELQTLPVRQNLFQNQFSNNYNVAFASYMMAMAPAIVAYAFTQRWVMEGVTQGAVKG
>NZ_CP050810.1|WP_039662977.1|10263_11961_-|glycoside-hydrolase-family-13-protein
MSTFPSRHGDTASAEAPWWRQAVVYQIYPRSFADSNGDGLGDLKGITSRADYLAKLGVDAVWLSPFYPSELADGGYDVIDYRDVDPRLGTLADFDEMVAALHSRGINLIVDIVPNHTSNKHVWFQEALTAGRGSAARERYVFREGKGIDGAEPPTDWVSAFGGPAWTRVDDGQWYLHLFASEQPDLNWDNREVHEEFLTTLKFWSDRGVDGFRIDVAHALAKDLTEPLPSWEELKGIPTASGRHPLFDREELGQIYAEWRALFNLYDPPRTAVAEAWVDSTRVPRYASPQSLGQAFNFDLLEADFETEQFAPIIRHNLKLAEYSGSSSTWVLSNHDVVRHATRYGLPNPPRQPGNLTPDEKHGAAWLLTGGTDPMLERERGLRRARAATMLILGLPGSTYLYQGEELGLHEVAEIPAADRQDPTFFRTGQAEIGRDGCRVPLPWTQGGESFGFGDGPAHLPQPEWFNQCAAADGGAAGTLELYREALRLRREFQTAERLEWVESPDKTLRFRRPNGWEVLTNFGTEPIVLDEADAARVVLRSEPASPEVREAMAGESTVWLKPTN
>NZ_CP050810.1|WP_024964647.1|29240_29768_-|inorganic-diphosphatase
MDFDVTIEIPKGNRNKYEVDHETGRIRLDRMLFTSTRYPDDYGFIDGTLGEDGDPLDALVLLDEPTFPGCVIRCRALGMFRMKDEAGGDDKVVCVPTGDQRASWRTELEDISEFHRLEIQHFFEVYKDLEPGKSVEGAHWVGREETEQEIRRSFQRAIDTGYYEHNPSLHPDNMK
>NZ_CP050810.1|WP_114949726.1|29836_31255_+|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MGRRAHLPTSWPNVWEDDDVWKRIVALLLAITVGGYLFADAWDLVPGPLTTKPTLPEPLPYPTLSQVTAHAPEPDEQASPAAANPPSPTGVAALISALANAENNTGKASVIVADPLTGKTIASYNPDRPTIPASNMKIVTARAALDVLGPENTLPTVVAAQGSTLYLVGGGDVLLAEGAGDPRATRGRAGLADLAGAVVDKLSGSVTQVNLVVDSSLFEGPQYFTDIEGVDRGYVMELRPLAVDRGRVQGRGYLPNPDLLAGEAFAEHLRAAGLGVGEVKRGTVANDAVELARVESAPVRELVDLLLTESDNSLSEVMGHLVAKAKGKPATFAGSAAAIGEVMAAAGYPMKGVTLGDASGLSRLNRVTAELLTAILLDTWKCQECRFAALPAGLPVSALNGTLTQRFGGTAVAGQVRAKTGTLVEAISLSGYLRTEAGYPLVFSIMLDELEPGTAPSSRTLIDTLVTGLAKL
>NZ_CP050810.1|WP_108726121.1|31351_32215_+|hypothetical-protein
MVNHEKVYRFARMLAGGGPADTPAQARALVADLRTQALRAPDIVADATRLMGEQSPDVKVVDRPTWAAAAAVWIDTMLPGKDVLDTFQGSLVLSAVSTKVLGQFDPFAEPARLYLVAPNISAFRAAYDLDRRDLSLWVAVHEFTHAVQFAAAPWLRGLLMSKASELCDALGEDSAHGLLDDVTAVMSLLEGHAEYVMNNVPVTHIRSRQRIVDAMAAQRAAANPVANLLLTRLGLPDKRRQYAAGESFVAGVVGRRGMEFFNRVWQRPENLPTQAELSDPDAWIERV
>NZ_CP050810.1|WP_108726120.1|32214_33258_+|tRNA-lysidine(34)-synthetase-TilS
MSFPHPAVTAARRAMTAALASVPDGGAVLLAVSGGSDSMAMTKVAMWAARGRIEVLSATVDHGLRPESGAEALAVDRYLRRILDTSIVTRIDVLASGGEGPEGNARNARYDRLADIARAGGRLKGTGPLTVFLGHTADDQAETVLMGLGRGSGPRSIAGMRQRAALPGHDDVPMVRPYLHMRRADLRVVCSQLDIPWLDDPSNHIDGPWRAADGSPLRRSEIRHRALPALDTALGGGVTDALARTATMIRDDDDLLTSLAAHVRKQVTSPDGVVVKELARQPRALRTRVLREILAEVGDRAGDIVYRHIDALDRLVCGADNNRELDLPGAHASRRADLLTIKRAEKS
>NZ_CP050810.1|WP_024964651.1|33254_33812_+|hypoxanthine-phosphoribosyltransferase
MNLDDCKDDLVKVVVTEEQINQRLAEMGKQISDDYRGDDSLLLVGVLRGAIMVMADLSRHISIPLHMDWMAVSSYGASTKTSGVVRILKDLDTELEGRSVLIVEDIIDSGLTLDWLLKNLESRGAKSVKIATLLRKPEAAKVDVDVEYVGFDIPNEFVVGYGLDYAEDYRHLPFVGVLAPHVYGG
>NZ_CP050810.1|WP_053793249.1|33812_35951_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MSDRKRRRLEEFNRKGRKAKAKASSDSGKDPRKLREQREKEERERKQRRIFWAIMGLLVTGAAVIFFFFNPSGFTSVKTSEGREILQSQSIDRIQVTDGTQIVQIWLAEKYKPTDLEGEEQSPTKKVQFQYTDPEANDVLALVAKADSKNGYNSIVPQQSAFFSLLTFILPMLIVLAIFFWMIPRMQGRMNEFGRVKRDGVESDLPDVTFADVAGADEAVEELREIKEFIETPEKFRKMGAKIPRGVLLYGPPGTGKTLLAKAVAGEAGVPFFHISASEFVEMFVGVGASRVRDLFTKAKKVAPAIIFVDEIDAVGRNRGSGIGGGNDEREQTLNQLLVEMDGFDERTNVIVIAATNRPDVLDPALLRPGRFDRQIGVDAPDLSGREQILKVHADGKPLAAAISLESIARRTPGFSGADLANLLNEAALLAARRGHTKIDEDDVDEAIDRVIAGPQRRTRVMNPKEKRMTAYHEAGHAVAAAALNHSAPVTKVTILPRGRALGYTMVIPTEDRYSTSRHELLDEMVYAMGGRAAEEVVFHDPTTGASNDIQKATNVARKMVTEYGMSQRVGAVRLVADESDPMTRMGGGNSREHSDQLARVVDDEVHALLDRAAQEAWQIMMDNRHVLDRLTTVLLEKETVLEEELKVIFQDIVKAPPRDLWLSSPDRPVSDLPPVPLPETEASAEEPTVLPGQETEEGKHVDLEPGDKADQ
>NZ_CP050810.1|WP_024964653.1|35947_36511_+|GTP-cyclohydrolase-I-FolE
MIDSARAQAAVRELLLAIGEDPDRDGLKDTPARVARSYAEIFSGLGEDPGSHLEKVFDVGHQELVLVRDIPVYSMCEHHLLPFHGVAHVGYIPGPDGRVTGLSKLARLVEGFAHRPQVQERLTTQVADTLAERIGADGVIVVVEAEHLCMSMRGVRKPGSRTVTSAVRGSLHDPATRAEAMSLIMAG
>NZ_CP050810.1|WP_039662959.1|36529_37309_+|dihydropteroate-synthase
MLVMGILNVTPNSFSDGGQFLQTDAAIDHGRELIAHGATILDIGGESTRPGAEPVEPAQEWERIADVVAELSDEITVSVDTYHAATARAAVAAGAQIVNDVTGGHGDMDMLATVAELDCDYILQHGRGNAQTMNSLASYDDVVAEVRSELLASRDAAVAAGIAPERIILDPGLGFAKVGDHDWRILRGLKAFCGEGHRLLIGQSRKRFLAPVTVADERDVATAVISAMLAQTDVWGVRVHNVAATATAIATMEMLRSQA
>NZ_CP050810.1|WP_108726913.1|37320_38148_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MELTGLRARGTHGVLDFEHSQAQDFVVDVTLFLDITRATATDNIDDTISYAEVADVARSIIEGEHADLIETLAHRIATRVKALGAEGVAVTVHKPQAPIPHEFADVAVTIEEWDTDAIAVVSIGANLDDPAHHVRSAISQIGEITEVIAASQLYRTAPRLAEGQEGQPDYVNAVVIVETGLNPHELLEKLQAIEAGHGRVRDERWGPRTLDLDIITYSDLTLDDPDLTLPHPRAAGRRFVLEPWFSIDPDAELAGHDIRSLLAKLGDQRVELYED
>NZ_CP050810.1|WP_025296998.1|38161_38638_+|DUF3180-domain-containing-protein
MSGKLRPTPISMLLGIAVVTGVTVFSLVSVVIRSGMNPADVPFWLFLVPIAIGTIMISQAWLVRQYRLGRRPVDQLYAARIWVLTQATSRGGAILAGGAFGVAVAYYMGGPTSFLTENAFNALLAGIGSVVMTILALVGERWCMHDDGSPEASEGAGA

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Crispr_ID: NZ_CP050810_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050810_4

1610403-1610490

Orphan

Consensus_repeat	Method
AGACTGCCGAAAAAGACGCAGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050810_4

>merge|NZ_CP050810|4|1610403-1610490|CRISPRCasFinder
AGACTGCCGAAAAAGACGCAGCCGAAAAAGACGCCGCACTAACCAAAGCTCAAACCGATTTCGAGACAGCCGAAAAAGACGCAGCCGA

>NZ_CP050810|4|4|1610403-1610490|CRISPRCasFinder
AGACTGCCGAAAAAGACGCAGCCGA	AAAAGACGCCGCACTAACCAAAGCTCAAACCGATTTCG
AGACAGCCGAAAAAGACGCAGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050810.1\|WP_108726531.1\|1612260_1613157_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP050810.1\|WP_080753879.1\|1616677_1617865_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_CP050810.1\|WP_126920148.1\|1603966_1604578_-\|LytR-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379163
NZ_CP050810.1\|WP_129288654.1\|1598094_1598883_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP050810.1\|WP_126920155.1\|1620403_1621570_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP050810.1\|WP_167801381.1\|1619267_1620371_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP050810.1\|WP_108726530.1\|1614880_1616419_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP050810.1\|WP_126920488.1\|1623109_1623937_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP050810.1\|WP_167801379.1\|1605674_1606997_-\|AGE-family-epimerase/isomerase	unknown	unknown	gnl\|CDD\|369267
NZ_CP050810.1\|WP_039661731.1\|1613983_1614808_-\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239317
NZ_CP050810.1\|WP_164978140.1\|1595781_1597347_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP050810.1\|WP_039661738.1\|1602072_1603698_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP050810.1\|WP_080689094.1\|1604587_1604887_-\|DUF3263-domain-containing-protein	unknown	unknown	gnl\|CDD\|378688
NZ_CP050810.1\|WP_114949897.1\|1617999_1619271_+\|DUF4032-domain-containing-protein	unknown	unknown	gnl\|CDD\|379077
NZ_CP050810.1\|WP_024963609.1\|1597375_1598098_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP050810.1\|WP_167801378.1\|1598985_1599999_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226789
NZ_CP050810.1\|WP_039661735.1\|1604974_1605643_+\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
NZ_CP050810.1\|WP_108726532.1\|1611377_1612259_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050810.1\|WP_053793503.1\|1621693_1622944_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP050810.1\|WP_114949252.1\|1607202_1608429_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949

Protein	Function_ID	Function_description	E-value
NZ_CP050810.1\|WP_108726531.1\|1612260_1613157_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.94262e-90
NZ_CP050810.1\|WP_080753879.1\|1616677_1617865_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_CP050810.1\|WP_126920148.1\|1603966_1604578_-\|LytR-C-terminal-domain-containing-protein	gnl\|CDD\|379163	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator. This family appears at the C-terminus of members of the LytR_cpsA_psr, pfam03816, family.	1.73974e-08
NZ_CP050810.1\|WP_129288654.1\|1598094_1598883_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	3.56668e-63
NZ_CP050810.1\|WP_126920155.1\|1620403_1621570_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	5.57802e-15
NZ_CP050810.1\|WP_167801381.1\|1619267_1620371_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	6.76045e-52
NZ_CP050810.1\|WP_108726530.1\|1614880_1616419_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.13804e-69
NZ_CP050810.1\|WP_126920488.1\|1623109_1623937_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	6.76351e-81
NZ_CP050810.1\|WP_167801379.1\|1605674_1606997_-\|AGE-family-epimerase/isomerase	gnl\|CDD\|369267	pfam07221, GlcNAc_2-epim, N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase). This family contains a number of eukaryotic and bacterial N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) enzymes (EC:5.3.1.8) approximately 500 residues long. This converts N-acyl-D-glucosamine to N-acyl-D-mannosamine.	2.69357e-85
NZ_CP050810.1\|WP_039661731.1\|1613983_1614808_-\|thioredoxin-domain-containing-protein	gnl\|CDD\|239317	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold. It is involved in the oxidative protein folding pathway in prokaryotes, and is the strongest thiol oxidant known, due to the unusual stability of the thiolate anion form of the first cysteine in the CXXC motif. The highly unstable oxidized form of DsbA directly donates disulfide bonds to reduced proteins secreted into the bacterial periplasm. This rapid and unidirectional process helps to catalyze the folding of newly-synthesized polypeptides. To regain catalytic activity, reduced DsbA is then reoxidized by the membrane protein DsbB, which generates its disulfides from oxidized quinones, which in turn are reoxidized by the electron transport chain.	5.25029e-07
NZ_CP050810.1\|WP_164978140.1\|1595781_1597347_+\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.90074e-55
NZ_CP050810.1\|WP_039661738.1\|1602072_1603698_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP050810.1\|WP_080689094.1\|1604587_1604887_-\|DUF3263-domain-containing-protein	gnl\|CDD\|378688	pfam11662, DUF3263, Protein of unknown function (DUF3263). This family of proteins with unknown function appears to be restricted to Actinobacteria.	9.08245e-27
NZ_CP050810.1\|WP_114949897.1\|1617999_1619271_+\|DUF4032-domain-containing-protein	gnl\|CDD\|379077	pfam13224, DUF4032, Domain of unknown function (DUF4032). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 170 amino acids in length. The family is found in association with pfam06293.	2.12176e-96
NZ_CP050810.1\|WP_024963609.1\|1597375_1598098_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.28051e-39
NZ_CP050810.1\|WP_167801378.1\|1598985_1599999_+\|hypothetical-protein	gnl\|CDD\|226789	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown].	3.06112e-25
NZ_CP050810.1\|WP_039661735.1\|1604974_1605643_+\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	3.61642e-121
NZ_CP050810.1\|WP_053793503.1\|1621693_1622944_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.07464e-76
NZ_CP050810.1\|WP_114949252.1\|1607202_1608429_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.31699e-12

>NZ_CP050810.1|WP_114949252.1|1607202_1608429_+|MFS-transporter
MRSKQGTDAHPFRRYLIAKCLIAAVVAWPVMTLVLQSKGLSYLQIGLLNSFGAAVSLILEVPMGRLADKFGQKHALAFGAAFVALGLGILALSSTTPAIYLSELIMGIGLALSSGADTAWLFAEHKRLSREGDYLKSQSTIGSVTMLFSASSSVIGPLLFSWGAGIPLWTSVVCYLAAAGTWAGLTVHAPSLSDVLDQQDAKRANERHTVFHRLARVFSNNSLFISLAFATTIVMTAVSNYSTYIGPFLQSQGLPVRYLGFVLVVGKIVQWLAIRNTYRLKKSTDEARLRVIAVIGFAILLLLALSSASSSAWVGGGAFVLMAGLSSTFFILIDEQVNLVISDKYRSTMLSVVAMFEEFSTIAIDPVIGAALDALGFSRAYLLLAALLCVAFGLAIGLAGVFVRSRRP
>NZ_CP050810.1|WP_167801379.1|1605674_1606997_-|AGE-family-epimerase/isomerase
MIVNDQLHAWLDSEFSALVDFARRSRSRYGFSTLDARGEADEAAGLQLWINCRMTHVFCLATLRGDESAREFAAHGVTSLRENFYDAAHGGFFANLAYATGKPATDGDVRKAAYAHAFVLLAACSAMQADVAGARELYELAVDAHAHFWEAEFGLVCESFDRGFTLSEAYRGANANMHTLEAMLAAWDATDDPRWLDKAGSILTFILGEAERIGWRIPEHFDATWTQLPDFNKDRPADPFRPFGLTPGHGIEWARLTLQYWAARTAYDAAQGPSAYEKTDASPSASTGAIDLLPGQARALFGQAIRDGWCADGEPGLVYTTDFAGSPVVHERMHWTICEAMSAAAALATHAQRTGEADVVAEMTAWFDTFLDFAKRHLIEAPGRWVHELDRTNAPAGVTWPGKPDVYHAAQCVLMPNLPLTPTFAGALKEKSPAARPYRS
>NZ_CP050810.1|WP_039661735.1|1604974_1605643_+|uracil-DNA-glycosylase
MSLSTIMDPEWAQAMAPMEADIHSMGDFLRAENAAGHGYLPAGKNVLRTFSYPLSKVRVLIVGQDPYPTPGHPIGLSFAVERNVCPIPRSLSNIYRELYDDLGIPPASHGDLTPWCENGVMLLNRVLTVRPGAPASHRGKGWEKITDHAIRTLAQRNQPLVAILWGRQAQELAPLLRTTPTITSAHPSPLSATRGFFGSKPFSRVNALLIEQGAQPIDWRLE
>NZ_CP050810.1|WP_080689094.1|1604587_1604887_-|DUF3263-domain-containing-protein
MTELERAVLRIEREWWRIAATREQAIRSELGMSPSKYYIQLSRMLDCERVWKADPVLVDRLRRLRDGRLAERGMLHDAEPGTSSGFSSGMESRFGADSL
>NZ_CP050810.1|WP_126920148.1|1603966_1604578_-|LytR-C-terminal-domain-containing-protein
MATRYPEDEFDRMAAERNTVGAHRQPPNARPWIIGVIAVLVLAPLLGIGLGKWLAGSDEPTAQPSTSASAPAEQTTPPAPSPAEETSPAPATQEAPKNEPTPSAQPPVVAEPNLGQRILVLNGRGTNGLAGQKAAVLKRAGFGNLNVADYKGGADPAETTVFYASPEFAGTARLAAEKLGIARVVESAEVASKHRTQVVIVLR
>NZ_CP050810.1|WP_039661738.1|1602072_1603698_-|chaperonin-GroEL
MAKIIHFDEEARRGMERGLDLLANTVKVTLGPKGRNVVLDKQWGAPSITNDGVSIAKEIELEDPFERIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVVAGANPIALRRGIDLAVDAVVKQLLADAKEVETREEIAATAGISAGDKEIGELIAEALDKVGKEGVVTVEESNTFGTELELTEGMSFDKGYLSPYFVTDPERQEVVLEDAYVLLVESKISNVKDLLPLLEKVMQTGKPLAIIAEDIEGEALATLVVNKIRGTFKSAAVKAPGFGDRRKEMLQDMAVLTGGQVISETVGLKVENAEIAMLGQARKVVMTKDSTTIVEGAGTAEDIKARVSTIKTQIENSTSDYDREKLQERLAKLAGGVAVIKSGAATEVELKERKQRIEDAVLNAKAAVEEGIVAGGGVALLQAADTVFETLELEGDEATGAQIVKIAVAAPLKQIAENAGLEGGVVAEKVRSLPAGEGLNAATGNYEDLLAAGIADPVKVTRSALQNAASIAGLFLTTEAVVANKPEPPSAGHDDAAAGMGGMY
>NZ_CP050810.1|WP_167801378.1|1598985_1599999_+|hypothetical-protein
MSRTDVPQWVTQSFVRSVSAVGATASREEIERICCHLIELWSSPGRSFHNTTHLFDLLGHIDTLAAEAHNVDVVRLAAWGHGLVFSTDGQAIYTRNGGEDRGASAALIRKYLLELAVPEDTVEEIRQLIVHMRKHPLPTPESGMYEPADMNLLVLTDAHLGALANQPQKYKTYMEKVREEYAHVPHTQYLQARLEVVTRLLGRRRIYTTPLAAQWEEAARQNLQLEQQRLLAELEKDAPASAVVEENTGDLAAAPESTVSDAEAAAPSQTVHLGSSLETASDDFEPGSPSRPLTPEEAKQARRDNIARATLEKIERAKEAKDRERARLDAFPSGLVE
>NZ_CP050810.1|WP_129288654.1|1598094_1598883_-|SDR-family-NAD(P)-dependent-oxidoreductase
MTPATSPLRGRALITGGSSGLGMTFARQLADRGMDLVLVARDCGRLDKAAAELRDRGASVEVISADLGDDADVQAISKRLGSAESPIDVFVNNAGSGLYAKMATSDASELLAGAQLMGMAPMVLGGAAAAAMKERGAGVIINTSSMSGAVPMGAYSAIKAFVRVWSDSLAIEVAPFGVQVVTFIPGWVRTEFHARTGVSTSSIPNFLWLDADRVVAECLADVDKGKTSSTPSKRFKLIGFLAKHAPAAGVKAAVKKLNKGRR
>NZ_CP050810.1|WP_024963609.1|1597375_1598098_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MSELQPLDDYHSESKKKARKNVRKFITRPALKTLLSTRVEGQDNVAGLEGAYIVVGNHTSHLDAPMVFTLLPEHMTEKLATGAAADYWYRRPAISKVTSLFFNTYPIERKRSSGPGAGKAKGMTSRLLREGIPILIFPEGTRSRTGEPGEFKVGAAALAIKFAIPIVPLALRGGHEAMPVGAVFPTPNRPPVDMFIGKPMYAEEGDDAEAFMARVRAHIMAMLEEGSANPAGEVGTAEEE
>NZ_CP050810.1|WP_164978140.1|1595781_1597347_+|HAMP-domain-containing-protein
MSTPFESGRPAPKIRRSLSARIVFAFMVLMVFVLIAISWLATVTVRGSLIDETDRNLRSSGRTMATVTVDQLINNTPEQLLPSEFYLYITYTTPTTTTPYGHLTVVNSRITEENGTPLNPELLAARRSSAPFTVPSTLEGQEWRIITTDLNYSPTNLTSIGSVVIGLPLEPINDTVRNLAGALATLVLITLVLGGLAAYLLVDQSLTGLRDIERATHEVAARNLSVRVPTGTDGSEVALLGESINRMLERVEESFEVQVASEKRMRQFVSDASHELRTPLATIRGYAELYRLGGVPDDSVPLAMSRVESESERMAHLVDDLLQLARLDERRKINMQSVDLATTALNTVTDFHVRAPQWPARVVGLTEEEPRSVVVRADAEKVMQVITNLLSNVITHTPEGTPVEVAVGVDSSQPHLGVVEVRDHGPGIKPGDAKRIFERFYRTDTSRSRESGGSGLGLAIVAAIMQVHDGEAQVAETPGGGLTIRLIFPGVIHEVHENTPKKREWLPHKRSQRAGNPPDQA
>NZ_CP050810.1|WP_108726532.1|1611377_1612259_-|hypothetical-protein
MSTVSVQKSSSTDLWQIVRTDVKAASLKPAIRITVLIWVLQIVIFAYVIPYILCHTATDAIGLEAAEALRAGLDLSVLGEYVTASVPLYGIPVGVVVGAILVCSDYELKTLGVLLARIPKRWWLGVSRLVTMAVVSLIMALCSFIAAATCSTIFTAIQGTEFGFDFGGTMLGLGATTLGLFSYAVLGSLFGYLTRSILGAVMLGLGWTFGIETLGIGMLSGSSDFFKFLHGVTLTGNIGSLPTALDRTAVLSIQPQLGVNTLHSGSVALLFIICWLVVCASVGIFLLCRRDVS
>NZ_CP050810.1|WP_108726531.1|1612260_1613157_-|ABC-transporter-ATP-binding-protein
MEKVVDCHGLSKTYRTGTVALDGLEFSVEKGAIHGLVGRNGAGKTTLMKCLFNLIRPTSGTINVFGQPAGLMAHNVGGLIEMPAFYNHLNGRQNLALFAGYFGVDGAECGRILELVGLANRAGEKASRYSLGMKQRLGIAIALLGKPELLILDEPVNGLDPQAIAETRDLMRTFRESGTTILLSSHLLGEIEQVCDTVTVLEAGKLVATGTPGQLRQQFNGQAPFELQVGDLAKASQLLGGMGVKVEVEGSSLLAYLPEDMAASDLVRALVNGNIEVGSVKRRDSLEAAYLSMTRKEQ
>NZ_CP050810.1|WP_039661731.1|1613983_1614808_-|thioredoxin-domain-containing-protein
MATKDNAQPATKKERREAAREKARILREQEAKRRRRNKALMIGAAVLVLALIIFAIVQIVGKTNSADDNYKGTARAAKLANVTDDYGIDVNAEGVAGKVVDGAGVLSVYSDYTCGGCINLENQFADTYHAKAKEGSLSVRLYPVATLSNAVSDNATAAMFYVATYAPEQAWAYNDALFKRTADAVSRRGSAPTVADFADIAAKVGVPTDVVNDLPASVSSEEWKAVATAATESFRQKGYTATPTLEVNGKVNDSWLKGGDIMAVIQSAIDAGAK
>NZ_CP050810.1|WP_108726530.1|1614880_1616419_-|serine/threonine-protein-kinase
MRERSMIGGYRIVERIGSGGMSTVYRAIDAEGRAVALKLLHPELAADPLSRARLRREVAMLQRVKSPYVAQILDAETDEEEIFVVTELIEGPTLDRDVRDSGHYTGGDLVELGQELAAALNAIHDAGILHRDLKPSNVMMGADGPILIDFGIAQLGDDLRMTQTGSLAHTPGFCDPVVIRGSAPDTDADWWALAAVLAYAATGRAPFGVGNSPAVMHRVLEGDADLPGLTVAAAEAFRSALSPRRAERISFAELLAVLDGQDDAQLAEPTVTYPPADAELTVTYPPADAEPTRVVPAPPVNAPLTRTSVFDRPEFTNPPPVEHPDIPVAESVPEWAIPPRHARLQVFAASIVVAIFALVQPMESAFVMSVSIVALSWLGGAQRDLKDRRLRNGGAYAGDVAGALLRAPLTLLGAILRSAVSVAVGAGVGWTTASALGFFTHLQPPVIYAASVYLAMVVAWFMGTNSNGREGARYLMEGIAPTVGYRLFWFAITLMVGLAAVVVVSQANVAVI
>NZ_CP050810.1|WP_080753879.1|1616677_1617865_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MATVTFENATRVYPGATTPAVDALNLEIKDGEFLVLVGPSGCGKSTSLRMLAGLEDVNSGRIYIGDRDVTDVSPKDRDIAMVFQNYALYPHMTVADNMGFALKIAGEKKEVIRQRVEEAAKILDLTQYLDRKPKALSGGQRQRVAMGRAIVRKPQVFLMDEPLSNLDAKLRVQTRTQIASLQRSLGVTTVYVTHDQTEALTMGDRIAVLKDGILQQVASPAEMFSRPANAFVAGFIGSPAMNLGPWRIEGSDAVFGDARFSLPAPVLDAVRADGSLIVGLRPEALEVAGPGEGGIPIKVTFVESLGSDAYVYGTIVGAERESDSFGSGDQSETMVVRIEPYVVPKAGEIVYLKPKAEHTHFFSASTGSRIETGAEAIIENVDNTAAEVRIEDPKA
>NZ_CP050810.1|WP_114949897.1|1617999_1619271_+|DUF4032-domain-containing-protein
MIRSLQITSAQVEPALLDLPWNVPLEEWPASIIAALPRGISRHIVRFAYLEGKVVAVKEIGESVAHHEYETLRNLNRLDAPCVEPLAVITGRYDDAGEPLNAALVTHHLPFSLPYRSLFGQASMRVDTVRRLIDALAVLMVRLHLLGFYWGDVSLSNTLFRRDAGEFSAYLVDAETGELEDNLSERKRHYDIDVARVNIIGELMDLQAGAILDSEFDAIAVGNRFEERYRELWSELTSEESFDRSERWRVDARIRRLNDLGFEVGELAMSTDIGGTSISIQPKVVDLGHYSRKLMRLTGLDVEEKQARRLVNDMEYYRTTTGKSNFPLEIVAHEWMMNVYEPTVQAVPPELRAKLQPAQLFHEILEHRWFCSERQGRDVPMAEAVGSYVNDVLAHRRDESRFIGSAADGPTTEEFEIGTIFGD
>NZ_CP050810.1|WP_167801381.1|1619267_1620371_-|Gfo/Idh/MocA-family-oxidoreductase
MTINYGIIGTGYFGAELGRALARLDGAKVLGVFDPANAVQCARELGAEIFASADALINDPRIDAVVVASPNNQHVEPVLTAARAGKAIFAEKPIALNYADCRAMVDAAREAGVVFMAGHVMNFMNGVRLAKRIIAEGRLGRVLHVRAARTGWEAEQPVATWKKVRALSGGHLYHHIHELDCVQSILGPARFATMVGGNVAHRGIDDVDDMLLIQLQFDDAFATLEYGSAFHWPEHHVLIQGELGAIMIDLQEVGVTVRIGDEEETHLLHRTPEEDRQRADIYASLTTTDGAVQYGHPDEEPPLWLAGIVEEEMTYFHGLMQGEPIAQEFAKLSDGTAAMEAIATADACTLSMKENRKVAIAEITQAV
>NZ_CP050810.1|WP_126920155.1|1620403_1621570_-|MarR-family-transcriptional-regulator
MSMHPALTPNASGDVGVSALMRDNSVHAVLNALSEEPRTFSITELCRMSELSRPTVTRILNDLMAEGLVHTKTATRSHAAGGRKPQLFSLNRKHHCGVVLRVNYDVVEGFALDAAGDVLTDVSDRFSDYGEVAEHLAGVLRKILNDAQCPVFSAAVVVMGIVHRGRVVRSESFPMLNDNLWIDQLNEILREHGHEAQVVALNDAKVAAQWMYDQLVTPEGGPDSMIALHCSEDLGCGLIFDGVLLDGAHGAAGEILQETDGEWMTVSKYLRALESEHGMSIRQLFAAAPALDQETPFVRTLGTLIGKALVPMVLTLDPDTVAVGGAIVDCGTPLIKAIEAELNKATPTSPLVSMAPRGAKSVKEGAKMFVLAQARNATMGLLNGSSRA
>NZ_CP050810.1|WP_053793503.1|1621693_1622944_+|sugar-ABC-transporter-substrate-binding-protein
MKRLLKTATAAAAALALLAGCSGTGSSSETTGANGPTKLNMWVPPLAANNEDKALWDEIVAPFEKENNVDVNITVIPWDAYETKYLTGISSNDGPDVGYMYSEMIGDYIAKNQLVDMTDKVTKEQKDNFYFLKNGEFAGKQYSIPLIVGGARVLFYNKDLLAKAGVDVPTTWDEFLAAGVKLKEAGIKPYTAAWGDPARGAMNHVFFPYLFQAGGKLFADDGSKTLFDSPEMLEAAKFIVKLREKGVLDETTTGTTPETQRKDFEEGKAAFVITSDQDMQKWTEAGINWGAIPSLKGKTEGTFIASDSLTMLKKCTNPDLCYKLISFVTSGSQMEKLHKQAAFPPLGKDEKSNYPEQFAKMYAEKANILHPLPVIPNSAGTYQVLYANLQQMLNGQKTPEQALGDAAKEANELLAK
>NZ_CP050810.1|WP_126920488.1|1623109_1623937_+|sugar-ABC-transporter-permease
MPSFAVLLLIALIPILYTAYLSFTKYDVLSDPVWYGTANYEKLATDQKFWSAMKNTVIYTVFTVPLQIFIPMLLADVLAKTEVKWLSSFVRSVLFVPVVASLILVGTVWRYMLSGDTGFFNSVLATVGIDPINFLGNPTWAMVVVIVVSAWKNIGYFLVLFYAGVLDIPGERYEAASVDGANRIQQFFYITIPGLRPVMVLCIILSTIWSFQVFDLVYVMTGGGPGGATTTLVMAIYQQGFKLFQMGSASAIAIVLLGIIVVFSAAQKLIIKEEN

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Crispr_ID: NZ_CP050810_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050810_5

1739486-1739567

Orphan

Consensus_repeat	Method
CGGGTTTAAGTACCGAGAATCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050810_5

>merge|NZ_CP050810|5|1739486-1739567|CRISPRCasFinder
CGGGTTTAAGTACCGAGAATCGCGGACTGGCTCGGTCCCGCACAGGCCGGACGTTTGCCGGGTTTAAGTACCGGGAATCGCG

>NZ_CP050810|5|5|1739486-1739567|CRISPRCasFinder
CGGGTTTAAGTACCGAGAATCGCG	GACTGGCTCGGTCCCGCACAGGCCGGACGTTTGC
CGGGTTTAAGTACCGGGAATCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050810.1\|WP_167801620.1\|1736967_1737717_+\|YwiC-like-family-protein	unknown	unknown	gnl\|CDD\|379525
NZ_CP050810.1\|WP_167801440.1\|1754166_1755846_+\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	unknown	unknown	gnl\|CDD\|236050
NZ_CP050810.1\|WP_167801619.1\|1733797_1734757_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381369
NZ_CP050810.1\|WP_167801436.1\|1741747_1743211_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050810.1\|WP_167801437.1\|1743635_1745930_+\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP050810.1\|WP_167801441.1\|1757002_1758757_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP050810.1\|WP_167801435.1\|1741065_1741713_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP050810.1\|WP_167801434.1\|1739659_1741060_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_CP050810.1\|WP_024964478.1\|1731855_1732674_-\|phosphatidylcholine-synthase	unknown	unknown	gnl\|CDD\|224104
NZ_CP050810.1\|WP_167801433.1\|1737847_1738897_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|179559
NZ_CP050810.1\|WP_167801431.1\|1734930_1735377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050810.1\|WP_052250992.1\|1730840_1731950_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050810.1\|WP_039661658.1\|1738989_1739388_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|224861
NZ_CP050810.1\|WP_167801439.1\|1748761_1753930_-\|DUF4091-domain-containing-protein	unknown	unknown	gnl\|CDD\|271234
NZ_CP050810.1\|WP_167801438.1\|1745962_1748620_+\|flippase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP050810.1\|WP_167801432.1\|1736356_1736941_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234818
NZ_CP050810.1\|WP_024964440.1\|1743411_1743636_+\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|225328
NZ_CP050810.1\|WP_167801430.1\|1732762_1733734_-\|ferrochelatase	unknown	unknown	gnl\|CDD\|366291
NZ_CP050810.1\|WP_025296540.1\|1735373_1736195_-\|type-I-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|376551
NZ_CP050810.1\|WP_039661649.1\|1756290_1756860_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102

Protein	Function_ID	Function_description	E-value
NZ_CP050810.1\|WP_167801620.1\|1736967_1737717_+\|YwiC-like-family-protein	gnl\|CDD\|379525	pfam14256, YwiC, YwiC-like protein. The YwiC-like protein family includes the B. subtilis YwiC protein, which is functionally uncharacterized. This domain family is found in bacteria, and is approximately 130 amino acids in length. There is a single completely conserved residue G that may be functionally important.	8.88531e-34
NZ_CP050810.1\|WP_167801619.1\|1733797_1734757_-\|aldo/keto-reductase	gnl\|CDD\|381369	cd19143, AKR_AKR6C1_2, AKR6C family of aldo-keto reductase (AKR). Voltage-gated potassium channel subunit beta (KCAB) from Arabidopsis thaliana and Egeria densa are founding members of aldo-keto reductase family 6 member C1 (AKR6C1) and C2 (AKR6C2), respectively. KCAB, also called Shaker channel b-subunit, or K(+) channel subunit beta, or potassium voltage beta 1, or KV-beta1, or KAB1, is a probable accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.	0
NZ_CP050810.1\|WP_167801440.1\|1754166_1755846_+\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	gnl\|CDD\|236050	PRK07564, PRK07564, phosphoglucomutase; Validated.	0
NZ_CP050810.1\|WP_167801437.1\|1743635_1745930_+\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP050810.1\|WP_167801441.1\|1757002_1758757_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.60987e-142
NZ_CP050810.1\|WP_167801435.1\|1741065_1741713_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.15185e-40
NZ_CP050810.1\|WP_167801434.1\|1739659_1741060_+\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_CP050810.1\|WP_024964478.1\|1731855_1732674_-\|phosphatidylcholine-synthase	gnl\|CDD\|224104	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism].	4.07459e-30
NZ_CP050810.1\|WP_167801433.1\|1737847_1738897_-\|histidinol-phosphate-transaminase	gnl\|CDD\|179559	PRK03321, PRK03321, putative aminotransferase; Provisional.	4.52396e-135
NZ_CP050810.1\|WP_024964440.1\|1743411_1743636_+\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	1.00238e-14
NZ_CP050810.1\|WP_025296540.1\|1735373_1736195_-\|type-I-3-dehydroquinate-dehydratase	gnl\|CDD\|376551	pfam01487, DHquinase_I, Type I 3-dehydroquinase. Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase.) catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate giving dehydroshikimate. Dehydroquinase functions in the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Type II 3-dehydroquinase catalyzes the trans-dehydration of 3-dehydroshikimate see pfam01220.	1.42044e-44
NZ_CP050810.1\|WP_039661658.1\|1738989_1739388_+\|phage-holin-family-protein	gnl\|CDD\|224861	COG1950, COG1950, Predicted membrane protein [Function unknown].	2.47932e-16
NZ_CP050810.1\|WP_167801439.1\|1748761_1753930_-\|DUF4091-domain-containing-protein	gnl\|CDD\|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	6.61519e-80
NZ_CP050810.1\|WP_167801438.1\|1745962_1748620_+\|flippase-like-domain-containing-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	1.95695e-30
NZ_CP050810.1\|WP_167801432.1\|1736356_1736941_+\|hypothetical-protein	gnl\|CDD\|234818	PRK00708, PRK00708, twin-arginine translocase subunit TatB.	0.00176689
NZ_CP050810.1\|WP_167801430.1\|1732762_1733734_-\|ferrochelatase	gnl\|CDD\|366291	pfam00762, Ferrochelatase, Ferrochelatase.	9.43903e-110
NZ_CP050810.1\|WP_039661649.1\|1756290_1756860_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	4.37965e-12

>NZ_CP050810.1|WP_039661658.1|1738989_1739388_+|phage-holin-family-protein
MNFLIGAAFNAVALWIATLMFSGIRLTGAGDALLANLGPGGQAAVYFLLAGAVLGAVNMVVRPIVKVLSLPFYILTLGLFFVVVNALMLMLTAWITSHFAMSLVIDSFGWALAGGVVVGLVNWTLSLIIGRD
>NZ_CP050810.1|WP_167801433.1|1737847_1738897_-|histidinol-phosphate-transaminase
MADYFRPDIANLPAYVAGRNPEDPEVIKVASNEMPFPTLPGMAAALGLHLSELNRYPDMGAVALKEAIAAFHNTSVANVAVGNGSVALIEQFLQAVCVPGAEVVIPWRSFEAYPIAIQVAGGKAVKVGLRNNGKIDLPAMLDAITARTRAILICTPNNPTSCALTHEELRRFLRSVPSQIPVLVDEAYVDFVEMNDAVRGVELAAEFANVISLRTFSKAYALAGLRVGYALGMENLVEGLDKVATPFGVNTLAQVAAVAALQERGEVERRVATIKAERSKLVGALRVLGWEGCPQGNFLWFDLGAESARFAHLCEREKLVVRTFAEGVRVSVAPEASLRLVRAYRSFRS
>NZ_CP050810.1|WP_167801620.1|1736967_1737717_+|YwiC-like-family-protein
MPNYHGAWAMITIPVLLGVLIGGFVWQHVLLLGLWWSGYFAFYAGGLWLRSRRRPRYLPPVRAYTLVTFVFGVGLLIAAPYLLRWLPLFIPLIATTAWASSHRKDRSLLNDAATVTAAILTLPVAFDLGTHELTPPAASADASLTGWGWVWLVTLIVGWYFLGTIFYVKTNIRERGKPTWYIASVVFHSVGLVGVLVLAVLGVVNWVLAALWLIIAARAIAVPAWKLTVRAIGLGEVAISVALFVAVLI
>NZ_CP050810.1|WP_167801432.1|1736356_1736941_+|hypothetical-protein
MSNDWLPDSKQPTPNRGPLYFFIAAAVLLFVVVLILVFQHMIRSGRDVGTDIKRPTARATTTDTPTTPTAPAAPTTPTPARPALEGAIEAAAFTTPAQNIHCRINSDNAECSIYAYDYPSPGQCEGVTATYVVHTEGDVDADCRHFVRTPDVFEYGTKIAKNGFACALEQDGVTCWSTKSGRGFELKRAADRIF
>NZ_CP050810.1|WP_025296540.1|1735373_1736195_-|type-I-3-dehydroquinate-dehydratase
MIFDLPASNAQRPAIIVPVVGTTPQVVIDEAIACEKAGADVVEFRLDFLLAAHPGMDVAAVGRELLRELFSSISVPILLTVRTMAQGGEVDLTPFRYRVLLATLLDVLMQEEFPAQRVGLDLEFTSEATPDLAARAVELGYTPVVSHHEWAETPDCEVMYVMLEDMLAVPNAVPKLAVMASNDDDTASLLNVTKQVAADCGRKIITIAMGQAGVRSRLEGWKYGSVATFATVGSPTAPGQPAIEDLLAVFGGGPGQAESVSQAESASQAEGLS
>NZ_CP050810.1|WP_167801431.1|1734930_1735377_+|hypothetical-protein
MKKLLASAAVTLLLVGCSDATGSHATSAASAKATTQVSHEASVKKLHGDFDTVAELKDAAVKAGYACESWKETKWNQGTCSGKDFLGVFTNRGSRSASMHQAQAAGESFTALVGDNWYISGDEAALKALEGKLNGKIEKVEGAAQKKD
>NZ_CP050810.1|WP_167801619.1|1733797_1734757_-|aldo/keto-reductase
MPYNRLGSAGLQVSQFSFGSWVTFGGQVDTGIAKEQLQAAADAGVNFFDNAEVYAGGKSEQIMGEAIRELGWKRHEYVISTKFFWGINGDMPNMVDTLNRKYLMQAIDGSLERLGLDFVDLAYCHRPDPHTPIEETVYAMSDIVESGKALYWGTSEWSADEIRAAWEIADKRNLRKPVMEQPQYNLLHRDRVEKEYARLYEDIGLGLTTWSPLAGGILTGKYVDGVPQGSRATLKGHDYLLQAAEDSRGKVGQLAKIAGDLGVSTGQLALGWVAANPNVSTVILGASSVEQLQENLGALSALKALEEADLKAKIDEIFA
>NZ_CP050810.1|WP_167801430.1|1732762_1733734_-|ferrochelatase
MRGLLIVNLGSPDSPNPSDVRTFLRDFLSDPDVIDFPRALWLPILHGIVLRTRPASSGALYETIWTPEGSPLVVHTRRQRDLLAAALPDWSVRYAMTYTAPSIASQLDAFVAEGVREIAVLPLYPQWAPSNTGSILAQVNAWKDAANGVRVDVLGQWPAEQHYVNWYADQIAHALAQLPEASQTRVILSYHGVPDRRRHRSVEYAAQCETTSSAIIRALSERGVSADVKTTYQSKFGPGKWLQPATIDTMSALPGDGVTAVILATPGFLADCIETIDELDVLNRKAFEAAGGKRFVRVAPMNDDPAFADVVRQLLAQREASHT
>NZ_CP050810.1|WP_024964478.1|1731855_1732674_-|phosphatidylcholine-synthase
MSTDNNQSGSAPRRARSIAPEAIAPLPDRIRAWLVHIFTMSGMAFAALAMLALINQEIAWMWLWLGIALIVDGVDGYFARRYKVKDVLPWFDGGILDIAIDYITWTFIPAIFMYTQLDLGPKPIAGILTVLVLTSSTLCYANENWKSVDYYFYGFPAAWNIVAVILYVLQPGRYANVFWVVLFILLTIVPFYWTHPFRVKRFMALNLASITVWIVSTGWLVAIFPHQPMWLMAAFWVSGGWFISTGLVRTLTGPDRPTRRRGQQPQHDRANS
>NZ_CP050810.1|WP_052250992.1|1730840_1731950_+|hypothetical-protein
MAAILTGAEGHAHLLTRHSALSYPLLRQAPMHPVQIKRVSGIDRLGNLSARSVTISLVPFRLGSFFAAADSLSPSDIPQALTESLASELRGLVTSRQHLVVGLVPVTHVEALREFFGTNKAVNAGVAVGDYLLNELSEHFLPADLPMLSEGQLSDQIAGRYMGDPREPHVIVGMSPSAWLRTWTAGTDQQRKFVAMAFNGTDSSKISSANYRALRQIGAPVIPSSRAYRSLFSPKFWAYVIIFVYSTLRALPVTFVENFHGSVAFLWAMDVITAIPYTWGLVAFVTAHKYWVRFVGLAVTIITFVAPYAYFWSHGQDYSWWVNAVVVLMIAGAVCYEGFNYWRDHAVAAGLAGGSADPAQSVYAQAQWK
>NZ_CP050810.1|WP_167801434.1|1739659_1741060_+|adenylosuccinate-lyase
MSFSDAYALGPLDGRYRPEVAPLIDHLSEQALNRTRAHVEVEWLIFLSTHQVLPGAPLLTDAEIAYLRAIPTSMDDADIARLAAIEAQTRHDVKAVEYFLKEKLDAAPASLEQTNLPQMHEIVHIFATSEDINNLAYALNVKAAVEEIWLPAARGLTAALSEMARANAATPMLSHTHGQPASPSTLGKEIAVLAHRLNRQIARIESAQFLGKFNGATGTYGAHSVSVPDADWPALARQFVEGLGLTFNPLTTQIESHDWMSELFADVARFNRIAHNLATDFWTYISLGYLAQNLAAQGSTGSSTMPHKVNPIRFENAEANFEISCALLDTLAATLVTSRLQRDLTDSSTLRNIGVAFGHSLLALTNLRRGVAGVEANRAALEADLDSHWEVLGEPIQQAMRTAAIAGATGMQDPYERLKELTRGHQVGATQMRAFIDSLGLPDDVAARLCNLTPGSYVGLAAELVR
>NZ_CP050810.1|WP_167801435.1|1741065_1741713_+|DedA-family-protein
MGIFTALASDDNLTGIAAWAVSIMESLGGLGVAFLIAVENLFPPLPSEIILPLAGFTASQGTSFNLAEAIIWATAGSLVGAWALYGIARIIGRERTRAIFNWLPLVKMSDVDKTEAWFHKHDQSTVFFGRMLPIFRSLISLPAGVIKMNFLKFTVLTTLGAAIWNATLIGAGYILGENWHLVDDYVGILSKIVLVAILALLLWWVVRRLRKTPRE
>NZ_CP050810.1|WP_167801436.1|1741747_1743211_+|hypothetical-protein
MVTFQLAVSAPQADAFLNSGYDLFSGFAVDAAAASSVTEVSDLMDLLCQRFPGSPYSADQPLDILHVPADPFTLDRLAVGPLHPQAFRGGVVEYPPFDGSGVARGGGVETDLLLVDPARLTVGSRLWRFYPGNPEPELRGIYHGVAYGWEDVAAGTFTAAVPSPFLGPVIERDWGGVPCDVELGDDGQPAAVTMVSPVEPEEERDFTLLESGMWAKRIAVGQDAHIYTDFVTGEVSGIPVRVVRSVRDGQTLMFQVAAMLTDALYLDRARFQRWSTGIYTALVEPAHLTNQQRQEATPIQWDVADRPAVAARVGTPINFSEPTELLRETFNLLAQTAPPGWEEETLRVQLVGQSAIYEGYAKLAGDQNASLRVLPTAIIHHLRRLKQDRAIAGEDPFLVAVINVRKDGQGQLNVNAAEEPVWADLVPAEEWHNEVSAFPRSGENMPDWLLNRLARAHREAEVSHVGSPYSADLTAGIQWIGELQPTD
>NZ_CP050810.1|WP_024964440.1|1743411_1743636_+|heavy-metal-associated-domain-containing-protein
MTTLTLKVDGMTCQHCVAHVTEELTALPGVDSVAVTLAEGTSDVLVTTSAEIADADLREAIDEAGNYTVREIIR
>NZ_CP050810.1|WP_167801437.1|1743635_1745930_+|copper-translocating-P-type-ATPase
MASEVDLAVRGMTCASCVARVEKKLNKVPGVTAVVNLATERAHIELDDAAGLSSEDLIEIVVKAGYDASLIRRTADAAQADADALAAQADAAAQAAAQARVRDLWRRFVVSAILSVPIVGASMLPSLQFPAWQWVIGALSLVVAFWCGWPFHRAAFRAARYGSSTMDTLVSLGVLASMGWSLWALLFGGAGHIGYTMHMTGIHGLDAGAQPHLYFESSAMIVTFLLIGRWLEARSRRSAGDALRSLLALGARETLLIRRADSHEATAETTTAVEELIDVADLRVGDVFRVRPGETVATDGVVVAGNSSVDASLVTGESTPIDVAAGDQVTGATLNLHGSLDVRATRVGEETTLAQMGRLLSEAQTGKAAAQRIADRISSYFVPAVIVIALLTFVIRLLAGSSEALASAITVLVVACPCALGLATPTALLVGSGRLARMGVLIRGPEVLERAHGIDTIILDKTGTLTSAFMSVSDVVSATSDTDVLALAAGLEAHSEHPIAQAIVRAARERGIAPTTATGFTSHAGLGVSGVHGGVRVAAGRLSWIAEGADVAPVRDRAEQLAAAGASVVVVAKDKHAIGVVAVRDTLRPEAADAVAALRDRGLRIVLVTGDNAQAAAGVAAELGISDVRAQVLPSHKLDILKELQKSGKRVAMVGDGVNDAAALAGADLSMALGSGTDVAKASADITIVNSDIRAIPNALRIAERTLRIIKENLGWAFAYNLVAIPLAVAGVIVPGVAAFAMASSSVIVVANSLRLRGPKPAGR
>NZ_CP050810.1|WP_167801438.1|1745962_1748620_+|flippase-like-domain-containing-protein
MTAQHEPENLSAPERAPERQVLLIDCPHKWDRNPVDLFGVVLVMVSIVFVILVSVYAQTTTVAVTEDVRRATGGILETILALPINVLEGMMSFFLPILLLGDMVYRRRWKTLITAIIAAAAAAGISALVVWMGATWWPKSDLFGLLPETLHRHSIIAALPYVSVIAALLTVSNSSKDSRITRGGWWLFGVVLMLSILQGHQNLPGALFTILMGVFSGLLTRYIVGGSPDRTTGTKFVELIRKAGIDVVTVVRIDELTGDEMLYAFDVTTSAPIGHTNLTSLEQIRQLLEVSSEDGNNTATASLIQEIDSLTLPGNQHEINGFDVYAFRDETLARYPVTMPSAISRNYIATDIQGRAFHLKVLDNDRQIISFLDDLWERLSLRTAIRQTRRTLDSTAEQMLLVQMRAEQIGIATPARSSIARLDASIMVAELATEDPLLSTIDSHITDADIDALWTELNTAHVHGMSHGNMHSRYVKVTPAGLHVASWQHSSVISSDTARQVDLAQTVAMLASVVGVERAVASAQRNLPTTVVASIAPFLQSSILPQPTRKALTKHKLQDLRDALAANIPEASSLQTVEYTRFSIKTIATVAVGVIALIVLFGSLNFADLRRAILAANPWWMLVAFLFGLGTYVGAALTLKAYSKETLPFGETLLVQMAASVVTLVAPAGIGPAALNLRFLQKKGVATTPALATVSVVQVGQFIVTIFLLMLLSLFTGDFGNLSLPSGTIQITIGLAVLAVAIVASVARLRRWVMAKIRPTLNQIWPRLVWLFTHPSRLFAGAGGSVLMSVAFIACFGFALKSFGYELPLITLAVTYLISNSVGSVVPSPGGIGPVEAALTGGLVIAGIPSSIAFSAAVLYRLFTFWGRVPLGWIALRIVQKRNVI
>NZ_CP050810.1|WP_167801439.1|1748761_1753930_-|DUF4091-domain-containing-protein
MKRFLGMGAVASIAISGFLAIPFARPALAEDSALGPLTTIAKWHDDIPGGTKYRIPALTQAPNGDLLAIYDMRPSQDDLASNIGVVMRRSKDDGATWGPVQTIRYETGKRGNGDPSVLVDRKTGRIFVFYAGTENQGLSGASAGNKATDPNTMQVVYSYSDDNGATWQHRNITAETKPANWAGIFAASGEGIQLRSPAHEGRLIQQYVVKIDGSLANVSLFSDDAGRTWSFGEPFRHFGDENKVVELSDGTLMMSARVGGGMRGVAYSADGGKTWRDGKKDGQQIDPTSNGTILRIYPDAKPGDPKAKMLMLLNSEDPNIRRNGTAKVSCDDGQTWPGRLTIEPNESYYITGTPIYKGGQATGKVGILVEREAYTTIAYTALDTTRMNMVCAPISAQQEGTESTPAKRISVVAGERATLPLTITNQGTQTLTPAQVSVTGYDKSEWTTTNSAAVPQIAPGQSVQVDVVLDVPDTLLGERTLVATYDVGGKTSQQLIFVTVTGEAKTPTPKLLVEPYLDATYEDGSKIWRGSGPVKPGPVGDIVVPWVRVTNVGNVPVENVKLNYKPEYCHQHRMDPGTKILPNSTYNPGICWSRDHMRHEITEQDVERGYWEQEFYATFTYEGKTYESNRGKVRLELDRESVNPSRIGKDKARVYLPTGDFQSSSFTRMPDDRPNSWILPTGHNLGLEMAKDNRTSAQLVVVSPKAGTLTAEVSEAAGITWEVSYPDKIVNSDQGKLQTGQTLDPLRTAAPRVEPNKNQAVWFVGRVAPEAKAGVINQEITLKLDGRVIATYPVSVTVRDVQLLDRSKRPFTLDLWWQPDAIADWYGVKPWSPEHFAHMKPYLRELASAQQEVVNVAIAQDPWYLPDAKHAQTASPYNSTVEWRWDGKNYAFNFDVFDKVVQAHADAGITGPIHTFGIKGFKQERLTYVDDTQGGKLVSRTIELGGEDYRQAWGSFLNAFEKHLKEKGWFERTQLFLDEPKAEQLAAIESFINNDAPAWQGKLALAANSVNEANKADFVAFNYSLLDKLPVEVVAQRADQGKQSLFYTYYEPQRPNVIAASPLHSGRMLGWIAQKRNLDGFLRWSFNSWPTDVYANSTYRYHQGDEYLIYPGGTKAKPEAGPVSSMRWESFRDGIDDAEIVREATMTKGIDAAEFQRVLTGFGDKDAGSANTWAAMVAARSIALNAIGAQVDGQPRMTAQASTMRVTPGSPVKVSVKVHAPLADGLDPVTVAASAPQGWQITPATAKTGAIAANRSGTVEFWVANNYGDGEGTIAFTANAAGHKLAAEVTLTASAGECVPASLVGKPGTNSEEPTEGLPSEGPVALAFDGNPGTHWHSEWNGHAYPIDAWWRTDAAPGQELCAVTYQSRQTGTNGHPSEAKIYTSADGQDWHEVATVKPNNSKGVQRFDLPAGTTGPWVKFSITKAASTVAGKAFGSAAEFGAVKKVASAAPPVIVDTVEDGKSYKSYEILDNGIQYVVNGKPATPGVHEAKPGQKVEIKMNGLAEHGYSLPKDAPVDWTHTFLGVEAPAVTAKIGQSLPATALKVHGNAGALTFALGAGAPAWLSVSEDGAITGDVPSDASIGKLSIPVTVTEVLALSAPKTSALPGTFTATATLVIDVVDAAEPAPEPVPGPEPAPGPEPAPGPAPVPGPVGPTFPGDEGQHQDDMNMTPHPLQDPSVSASAPKSESGLAWTGAAVVGLAVMSLVFLLAGFVLTVRRRKA
>NZ_CP050810.1|WP_167801440.1|1754166_1755846_+|alpha-D-glucose-phosphate-specific-phosphoglucomutase
MNERAGMLAQKEDLIDVDALICAYYDIEPDPDNPAQQVVFGTSGHRGSAFDGAFNEAHIVATTQAIVEYRAAQGIDGPLYIGRDTHALSEPAEHTALEVLAANDVEVRLDARNSWTPTPAVSLAILTANGADTAAGVRTQGPGLADGIVITPSHNPPRDGGFKYNPPHGGPADTDATEVIAARANEILRQGWKQVKRVPYEQARVAETTRGHDYLSAYVDDLQSIIDLEAIRTAGVRIGADPMGGASAEYWNAIGERYGLDLTVVNPVVDPAWPFMTLDWDGKIRMDCSSPYAMASLLERMKPGADGVVPFDIATGNDADSDRHGIVTPDSGLMNPNHYLAVAIKYLFEHRPEWGPTVGVGKTLVSSSLIDRVVSGMGRPMVEVPVGFKWFVPGLVSGTLGFGGEESAGASFLRKNGTVWTTDKDGIIMDLLAAEILAVTGQSPSILHRELTGMYGESAYARIDAAATKEEKAKLKKLSPSAVTATVLVGEEITDRLVDAPGNGAAIGGLKVTTENAWFAARPSGTEDVYKIYAESFLGAEHLAKVQAEAKDVVSAALA
>NZ_CP050810.1|WP_039661649.1|1756290_1756860_+|TetR/AcrR-family-transcriptional-regulator
MQVLKEEVRERILAAAIQVFYEKDFRSARMQDIANLAGVSASLLYSYFKNKEKLFEDVASSHLFDFDQIAREEESICTGTPFDRYKLAAEEPLLDMLAHHKLLVILIDKSQGTAYEHTKADFIESIERHIRHMTNRGTSSQYPDLLAHVLASNFVESLMEVARHYSNEDEARNMLALLAQCYYEGVNSL
>NZ_CP050810.1|WP_167801441.1|1757002_1758757_+|ABC-transporter-ATP-binding-protein
MKDKKALVREVMAKSLLSNAMLLTSTILGLIPVVLVIYLIHLLIKGTLSPSAIALVATAMAACVAGKAACTYAATWKTHQVAYSSLVDMRLRIVHHLKKLPLGFFHIRRPGDLANIMRNDVEQVEVYLAHGLPESASATVFPTVTFIFMFAVDWRLALCMMIGLPFMWLVKKAAGSAWSKGFKVVAQYASHMQDSLMEYVANIAVIKAFGKEERKTDETIRTARDYVSWATSSMNAISVPMALIALFMESGTVLVLIVGTWLLSIGDISIERLILAMVLSTAFTSSMAKTATLQHYRFMFDQAMSGIESVLSVEAAHPSENTLEPRMGDIEMDKVSFSYPSNKDSSSVRAQALDSINLVFRQGSTNALVGSSGCGKSTLASLLMGFWQPESGRICVGGQDLSLLSERQVSSLFSIVQQDVFLFNQSIEENILIGRPDATHEEVVEAARRARIHDFIAKLPQGYATVAGEGGVQLSGGERQRISIARAMLKDAPVIILDEATAAVDAENEALIQEALDALSRNKTVVTIAHHLNAVRDADQIVVMQEGRIVGSGTHEQLMYTCPLYQEMVAKQKQADNWDIKEVS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP050810_4	4.1\|1610428\|38\|NZ_CP050810\|CRISPRCasFinder	1610428-1610465	38	NZ_CP050810.1	1609321-1609358	0	1.0
NZ_CP050810_4	4.1\|1610428\|38\|NZ_CP050810\|CRISPRCasFinder	1610428-1610465	38	NZ_CP050810.1	1609369-1609406	1	0.974
NZ_CP050810_4	4.1\|1610428\|38\|NZ_CP050810\|CRISPRCasFinder	1610428-1610465	38	NZ_CP050810.1	1609552-1609589	2	0.947

1. spacer 4.1|1610428|38|NZ_CP050810|CRISPRCasFinder matches to position: 1609321-1609358, mismatch: 0, identity: 1.0

aaaagacgccgcactaaccaaagctcaaaccgatttcg	CRISPR spacer
aaaagacgccgcactaaccaaagctcaaaccgatttcg	Protospacer
**************************************

2. spacer 4.1|1610428|38|NZ_CP050810|CRISPRCasFinder matches to position: 1609369-1609406, mismatch: 1, identity: 0.974

aaaagacgccgcactaaccaaagctcaaaccgatttcg	CRISPR spacer
aaaagacgccgcactaaccaaagctcaagccgatttcg	Protospacer
****************************.*********

3. spacer 4.1|1610428|38|NZ_CP050810|CRISPRCasFinder matches to position: 1609552-1609589, mismatch: 2, identity: 0.947

aaaagacgccgcactaaccaaagctcaaaccgatttcg	CRISPR spacer
aaaagacgccgcactaaccaaggctcaagccgatttcg	Protospacer
*********************.******.*********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP050810_1	1.23\|5348\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	5348-5380	33	NC_048095	Arthrobacter phage Judy, complete genome	38307-38339	3	0.909
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP050095	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence	199540-199564	3	0.88
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	410084-410108	3	0.88
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP053443	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence	169650-169674	3	0.88
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	220289-220313	3	0.88
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP021032	Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence	140096-140120	3	0.88
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	152463-152487	3	0.88
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NC_012854	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505, complete sequence	125050-125074	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP018232	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed4, complete sequence	104389-104413	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP025506	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence	251138-251162	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP016291	Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence	199408-199432	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP022668	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence	139244-139268	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP050088	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence	396831-396855	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	MT104473	Pseudomonas phage MR13, complete genome	26130-26154	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	MT104475	Pseudomonas phage MR15, complete genome	26188-26212	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	KJ507100	Pseudomonas phage phiPSA1, complete genome	26922-26946	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	208057-208081	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP054026	Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence	228923-228947	4	0.84
NZ_CP050810_3	3.3\|28754\|25\|NZ_CP050810\|CRISPRCasFinder	28754-28778	25	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	70327-70351	4	0.84
NZ_CP050810_1	1.11\|4616\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4616-4648	33	NZ_LN831789	Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE2	55360-55392	5	0.848
NZ_CP050810_1	1.7\|4372\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4372-4404	33	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	310922-310954	6	0.818
NZ_CP050810_1	1.23\|5348\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	5348-5380	33	NZ_LN831789	Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE2	68652-68684	7	0.788
NZ_CP050810_1	1.38\|6263\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6263-6295	33	MT276994	Aeromonas phage AhyVDH1, complete genome	21170-21202	7	0.788
NZ_CP050810_1	1.50\|6995\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6995-7027	33	FR687252	Pantoea phage LIMElight complete genome	26680-26712	7	0.788
NZ_CP050810_1	1.50\|6995\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6995-7027	33	NC_019454	Pantoea phage LIMElight, complete genome	26680-26712	7	0.788
NZ_CP050810_1	1.3\|4128\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4128-4160	33	NZ_CP022192	Yangia pacifica strain YSBP01 plasmid unnamed2, complete sequence	136011-136043	8	0.758
NZ_CP050810_1	1.11\|4616\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4616-4648	33	NZ_CP025810	Sulfitobacter sp. SK025 plasmid unnamed2, complete sequence	153446-153478	8	0.758
NZ_CP050810_1	1.15\|4860\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4860-4892	33	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	63958-63990	8	0.758
NZ_CP050810_1	1.18\|5043\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	5043-5075	33	NC_011987	Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence	128523-128555	8	0.758
NZ_CP050810_1	1.46\|6751\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6751-6783	33	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	834645-834677	8	0.758
NZ_CP050810_1	1.50\|6995\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6995-7027	33	NZ_CP010858	Marinovum algicola DG 898 plasmid pMaD3	5363-5395	8	0.758
NZ_CP050810_1	1.4\|4189\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4189-4221	33	MG775258	Pseudomonas phage Henninger, complete genome	27517-27549	9	0.727
NZ_CP050810_1	1.11\|4616\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4616-4648	33	NC_022599	Micrococcus sp. V7 plasmid pLMV7, complete sequence	90164-90196	9	0.727
NZ_CP050810_1	1.23\|5348\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	5348-5380	33	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	275013-275045	9	0.727
NZ_CP050810_1	1.38\|6263\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6263-6295	33	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	239616-239648	9	0.727
NZ_CP050810_1	1.43\|6568\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6568-6600	33	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	74094-74126	9	0.727
NZ_CP050810_1	1.1\|4006\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4006-4038	33	NZ_LR134446	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 4, complete sequence	80115-80147	10	0.697
NZ_CP050810_1	1.4\|4189\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4189-4221	33	NZ_CP031163	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence	469650-469682	10	0.697
NZ_CP050810_1	1.11\|4616\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4616-4648	33	KX898400	Pseudomonas phage JG054, complete genome	14994-15026	10	0.697
NZ_CP050810_1	1.13\|4738\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	4738-4770	33	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	196991-197023	10	0.697
NZ_CP050810_1	1.32\|5897\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	5897-5929	33	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	532016-532048	10	0.697
NZ_CP050810_1	1.40\|6385\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6385-6417	33	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	6270-6302	10	0.697
NZ_CP050810_1	1.40\|6385\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6385-6417	33	NZ_CP029177	Acidibrevibacterium fodinaquatile strain G45-3 plasmid unnamed1, complete sequence	43647-43679	10	0.697
NZ_CP050810_1	1.43\|6568\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6568-6600	33	MN585994	Mycobacterium phage SheaKeira, complete genome	1260-1292	10	0.697
NZ_CP050810_1	1.43\|6568\|33\|NZ_CP050810\|PILER-CR,CRISPRCasFinder,CRT	6568-6600	33	NC_048859	Bifidobacterium phage BadAargau2, complete genome	5732-5764	10	0.697

1. spacer 1.23|5348|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NC_048095 (Arthrobacter phage Judy, complete genome) position: , mismatch: 3, identity: 0.909

ccccgtacaccaagttcgcggcctacgccctct	CRISPR spacer
ccccgtacaccaagttcggcgcctacgccctcc	Protospacer
******************  ************.

2. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP050095 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence) position: , mismatch: 3, identity: 0.88

tgcccaagccgaacgagaggcagcc	CRISPR spacer
cccccaagccgaacgagcggcagcc	Protospacer
. *************** *******

3. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 3, identity: 0.88

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ctcccaagccgaacgagcggcagcc	Protospacer
. *************** *******

4. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP053443 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence) position: , mismatch: 3, identity: 0.88

tgcccaagccgaacgagaggcagcc	CRISPR spacer
cccccaagccgaacgagcggcagcc	Protospacer
. *************** *******

5. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 3, identity: 0.88

tgcccaagccgaacgagaggcagcc	CRISPR spacer
cgccgaagccgaacgagcggcagcc	Protospacer
.*** ************ *******

6. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP021032 (Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence) position: , mismatch: 3, identity: 0.88

tgcccaagccgaacgagaggcagcc	CRISPR spacer
cgccgaagccgaacgagcggcagcc	Protospacer
.*** ************ *******

7. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 3, identity: 0.88

tgcccaagccgaacgagaggcagcc	CRISPR spacer
cgccgaagccgaacgagcggcagcc	Protospacer
.*** ************ *******

8. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NC_012854 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505, complete sequence) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ccccgaagccgaacgagcggcagcc	Protospacer
. ** ************ *******

9. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP018232 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ccccgaagccgaacgagcggcagcc	Protospacer
. ** ************ *******

10. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ccccgaagccgaacgagcggcagcc	Protospacer
. ** ************ *******

11. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP016291 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ccccgaagccgaacgagcggcagcc	Protospacer
. ** ************ *******

12. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ccccgaagccgaacgagcggcagcc	Protospacer
. ** ************ *******

13. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ccccgaagccgaacgagcggcagcc	Protospacer
. ** ************ *******

14. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to MT104473 (Pseudomonas phage MR13, complete genome) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
agcccaagccgaacgcgaagcagca	Protospacer
 ************** **.*****

15. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to MT104475 (Pseudomonas phage MR15, complete genome) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
agcccaagccgaacgcgaagcagca	Protospacer
 ************** **.*****

16. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to KJ507100 (Pseudomonas phage phiPSA1, complete genome) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
agcccaagccgaacgcgaagcagca	Protospacer
 ************** **.*****

17. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ccccgaagccgaacgagcggcagcc	Protospacer
. ** ************ *******

18. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP054026 (Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ccccgaagccgaacgagcggcagcc	Protospacer
. ** ************ *******

19. spacer 3.3|28754|25|NZ_CP050810|CRISPRCasFinder matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 4, identity: 0.84

tgcccaagccgaacgagaggcagcc	CRISPR spacer
ccccgaagccgaacgagcggcagcc	Protospacer
. ** ************ *******

20. spacer 1.11|4616|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN831789 (Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE2) position: , mismatch: 5, identity: 0.848

-gtggattgctgggcgcggaccgcttccaccgcg	CRISPR spacer
agtggatc-ttgggcgaggaccgcttcgaccgcg	Protospacer
 ******. .****** ********** ******

21. spacer 1.7|4372|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 6, identity: 0.818

cccgatcacgcggaaccttcaacg-caagcttcc	CRISPR spacer
ccagatcacgcggacccttcaacgacgagtttt-	Protospacer
** *********** ********* *.**.**.

22. spacer 1.23|5348|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN831789 (Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE2) position: , mismatch: 7, identity: 0.788

ccccgtacaccaagttcgcggcctacgccctct	CRISPR spacer
gccggaccgccaagctcgcggcctccgccctct	Protospacer
 ** *  *.*****.********* ********

23. spacer 1.38|6263|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to MT276994 (Aeromonas phage AhyVDH1, complete genome) position: , mismatch: 7, identity: 0.788

ccggtagtggccgggcaggctcacgccgacccg	CRISPR spacer
gcggtagaggccgggcaggctcaggcttatctg	Protospacer
 ****** *************** **. *.*.*

24. spacer 1.50|6995|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to FR687252 (Pantoea phage LIMElight complete genome) position: , mismatch: 7, identity: 0.788

cgggatcgagcagacgattaccgcgaccggcgt	CRISPR spacer
cacggtagagcagacgattaccccgaccgccga	Protospacer
*. *.* *************** ****** **

25. spacer 1.50|6995|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NC_019454 (Pantoea phage LIMElight, complete genome) position: , mismatch: 7, identity: 0.788

cgggatcgagcagacgattaccgcgaccggcgt	CRISPR spacer
cacggtagagcagacgattaccccgaccgccga	Protospacer
*. *.* *************** ****** **

26. spacer 1.3|4128|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022192 (Yangia pacifica strain YSBP01 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

gtgattaacgccctcggcggcttcgctggactc	CRISPR spacer
ctgatgaacgccatcggcggcttcgtcgagccc	Protospacer
 **** ****** ************..*..*.*

27. spacer 1.11|4616|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025810 (Sulfitobacter sp. SK025 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

gtggattgctgggcgcggaccgcttccaccgcg	CRISPR spacer
agggattacttggcgcggaccgcttcaagcagg	Protospacer
. *****.** *************** * *. *

28. spacer 1.15|4860|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 8, identity: 0.758

--ctcggtgcccttctgtttgaaaatctcgaacgc	CRISPR spacer
aactca--tcccttctgttttaaaatcgcgaacag	Protospacer
  ***.   *********** ****** *****.

29. spacer 1.18|5043|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 8, identity: 0.758

gaccaccaagcgcaccaacgacagcctggacag	CRISPR spacer
gccgaccaagcgcaccaaggacatcctgatgtg	Protospacer
* * ************** **** ****.   *

30. spacer 1.46|6751|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gccatgccgggtatcgtgacggtggtggatgac	CRISPR spacer
gccatgccgggtatcatgacggcggtcatcatc	Protospacer
***************.******.*** . .. *

31. spacer 1.50|6995|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010858 (Marinovum algicola DG 898 plasmid pMaD3) position: , mismatch: 8, identity: 0.758

cgggatcgagcagacgattaccgcgaccggcgt	CRISPR spacer
cgggatcgcgcagacgatgaccgcttgggtcgc	Protospacer
******** ********* *****    * **.

32. spacer 1.4|4189|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to MG775258 (Pseudomonas phage Henninger, complete genome) position: , mismatch: 9, identity: 0.727

ccctaagggtggcttcgacgtcgttgagcattg	CRISPR spacer
actgcaaggtgggttcgacctcgttgagcatct	Protospacer
 *.  *.***** ****** ***********.

33. spacer 1.11|4616|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NC_022599 (Micrococcus sp. V7 plasmid pLMV7, complete sequence) position: , mismatch: 9, identity: 0.727

gtggattgctgggcgcggaccgcttccaccgcg	CRISPR spacer
ccgccgagctcggcgcggaccgctaccaccgca	Protospacer
 .*    *** ************* *******.

34. spacer 1.23|5348|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 9, identity: 0.727

ccccgtacaccaagttcgcggcctacgccctct	CRISPR spacer
tctaccgcaccaaggtcgcggccttcgccctcg	Protospacer
.*.  ..******* ********* *******

35. spacer 1.38|6263|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 9, identity: 0.727

ccggtagtggccgggcaggctcacgccgacccg	CRISPR spacer
cttgcggtggccggtcaggcgcacgccgacgat	Protospacer
*. *..******** ***** *********

36. spacer 1.43|6568|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 9, identity: 0.727

gcgtgtgacggcacagatcaaggccgataccgg	CRISPR spacer
gaaaagcacggcacagaccagggccgataccga	Protospacer
* . .  **********.**.***********.

37. spacer 1.1|4006|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134446 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 4, complete sequence) position: , mismatch: 10, identity: 0.697

ggccaatagtcgttgtccacgacgtcggcgtta	CRISPR spacer
acgccgtagtcgttgaccacgacggcggcgccc	Protospacer
.  * .********* ******** *****..

38. spacer 1.4|4189|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031163 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence) position: , mismatch: 10, identity: 0.697

ccctaagggtggcttcgacgtcgttgagcattg	CRISPR spacer
tgggacggatggcttcgatgtcgttgagcagga	Protospacer
.   * **.*********.***********  .

39. spacer 1.11|4616|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to KX898400 (Pseudomonas phage JG054, complete genome) position: , mismatch: 10, identity: 0.697

gtggattgctgggcgcggaccgcttccaccgcg	CRISPR spacer
tgagtctgctgggcgcggatcgctgccacctgc	Protospacer
  .* .*************.**** *****

40. spacer 1.13|4738|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 10, identity: 0.697

ggtctccaactgggccgtgttcaatgcctgctc	CRISPR spacer
aaggggaaactgggccgtgtccagtgcctgcac	Protospacer
..     *************.**.******* *

41. spacer 1.32|5897|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 10, identity: 0.697

gactattggacgctgacgcttgccgagcgtgaa	CRISPR spacer
agtgccctgatgctgacgcttgccgagcgtgag	Protospacer
...  .. **.*********************.

42. spacer 1.40|6385|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

cgcgaccttgatcccgccacccgaataggacag	CRISPR spacer
aacgaccttgaacccgccatccgaattgcggct	Protospacer
 .********* *******.****** * .

43. spacer 1.40|6385|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029177 (Acidibrevibacterium fodinaquatile strain G45-3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

cgcgaccttgatcccgccacccgaataggacag	CRISPR spacer
accgcccttgatcccgccacccgcattgatatc	Protospacer
  ** ****************** ** *.

44. spacer 1.43|6568|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to MN585994 (Mycobacterium phage SheaKeira, complete genome) position: , mismatch: 10, identity: 0.697

gcgtgtgacggcacagatcaaggccgataccgg	CRISPR spacer
ctcgacgccgacacagatcaagaccgataccga	Protospacer
 .  ..* **.***********.*********.

45. spacer 1.43|6568|33|NZ_CP050810|PILER-CR,CRISPRCasFinder,CRT matches to NC_048859 (Bifidobacterium phage BadAargau2, complete genome) position: , mismatch: 10, identity: 0.697

gcgtgtgacggcacagatcaaggccgataccgg	CRISPR spacer
agccaagtcggcacagaccaaggccgacaccgc	Protospacer
.  .. * *********.*********.****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1207267 : 1217887

Microbacterium_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_167801346.1\|1207267_1211086_-	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	7.3e-33	25.1
WP_167801347.1\|1211094_1212357_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_039662053.1\|1212353_1212932_-	phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_126919993.1\|1212928_1213975_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	9.2e-63	43.9
WP_126919995.1\|1213971_1215471_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.7e-57	35.3
WP_039662051.1\|1215503_1216211_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FGF0	Synechococcus_phage	2.1e-39	38.9
WP_114949410.1\|1216278_1216770_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.2e-19	38.8
WP_108726717.1\|1216908_1217364_-	hypothetical protein	NA	NA	NA	NA
WP_024963390.1\|1217590_1217887_-	co-chaperone GroES	A0A221S308	uncultured_virus	1.8e-19	47.9

DBSCAN-SWA_2

1654412 : 1665887

Corynebacterium_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_167801396.1\|1654412_1655870_-	hypothetical protein	A0A0E3DLW9	Propionibacterium_phage	3.1e-109	46.9
WP_126919866.1\|1655866_1656106_-	hypothetical protein	NA	NA	NA	NA
WP_126919864.1\|1656282_1656609_-	HNH endonuclease	A0A1D8ETP1	Propionibacterium_phage	5.6e-11	39.8
WP_167801397.1\|1656719_1657373_-	hypothetical protein	NA	NA	NA	NA
WP_167801398.1\|1657751_1659107_-	DEAD/DEAH box helicase	A0A1L6BZE2	Pasteurella_phage	1.9e-140	53.3
WP_167801399.1\|1659087_1659369_-	VRR-NUC domain-containing protein	A0A1W6JQA8	Corynebacterium_phage	1.7e-16	50.5
WP_167801400.1\|1659678_1662072_-	hypothetical protein	A0A1W6JQ82	Corynebacterium_phage	8.3e-253	54.5
WP_167801401.1\|1662075_1664010_-	DNA polymerase	A0A2K5B2B0	Erysipelothrix_phage	1.9e-210	54.5
WP_167801402.1\|1664169_1664730_-	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	7.4e-35	47.8
WP_167801403.1\|1664732_1665887_-	DUF2800 domain-containing protein	A0A1W6JQ97	Corynebacterium_phage	3.7e-97	54.2

DBSCAN-SWA_3

2000478 : 2095382

Erysipelothrix_phage(38.46%)

capsid,head,tRNA,tail,terminase,transposase,holin,bacteriocin,portal,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_167801472.1\|2000478_2002698_+\|bacteriocin	SagD family bacteriocin biosynthesis docking scaffold	NA	NA	NA	NA
WP_126714371.1\|2002725_2004489_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	3.2e-15	25.9
WP_167801473.1\|2004490_2006233_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.7e-25	25.9
WP_039663256.1\|2006174_2007191_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_167801474.1\|2007364_2009449_+	alpha-galactosidase	NA	NA	NA	NA
WP_025296732.1\|2009445_2010774_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_024963707.1\|2010776_2011682_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_051505948.1\|2011678_2012533_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_167801475.1\|2012653_2015443_+	glycoside hydrolase family 16 protein	NA	NA	NA	NA
WP_039663253.1\|2015801_2016542_+	hypothetical protein	NA	NA	NA	NA
WP_167801476.1\|2016573_2017791_+	hypothetical protein	NA	NA	NA	NA
WP_167801477.1\|2018072_2021114_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	4.6e-22	23.0
WP_025296736.1\|2021251_2021467_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_167801625.1\|2021517_2021736_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_167801478.1\|2021751_2022915_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_167801626.1\|2022911_2023925_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.0e-58	45.6
WP_167801479.1\|2024143_2026201_+	hypothetical protein	NA	NA	NA	NA
WP_167801480.1\|2026197_2027010_-	DNA adenine methylase	A0A0H3UYZ1	Geobacillus_virus	2.1e-59	43.6
WP_167801481.1\|2027015_2027225_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_167801627.1\|2027224_2028031_-	site-specific DNA-methyltransferase	R4THJ7	Phaeocystis_globosa_virus	1.9e-20	30.1
WP_167801482.1\|2028131_2029973_-	AAA family ATPase	NA	NA	NA	NA
WP_167801483.1\|2029969_2030416_-	hypothetical protein	NA	NA	NA	NA
WP_167801484.1\|2030408_2031452_-	hypothetical protein	NA	NA	NA	NA
WP_167801628.1\|2031946_2032525_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_167801485.1\|2032589_2032835_+	hypothetical protein	A0A2I4R673	Erysipelothrix_phage	2.6e-08	44.6
WP_167801486.1\|2032838_2033258_+	hypothetical protein	NA	NA	NA	NA
WP_167801487.1\|2033258_2034434_+	DUF2800 domain-containing protein	A0A1W6JQ97	Corynebacterium_phage	2.3e-110	54.6
WP_167801488.1\|2034449_2034998_+	DUF2815 family protein	A0A1W6JQ93	Corynebacterium_phage	1.7e-60	62.6
WP_167801489.1\|2035015_2035174_+	hypothetical protein	NA	NA	NA	NA
WP_167801490.1\|2035276_2037217_+	DNA polymerase	A0A2K5B2B0	Erysipelothrix_phage	8.1e-206	55.1
WP_167801491.1\|2037370_2038132_+	BRO family protein	A0A1Q1PVZ8	Staphylococcus_phage	1.5e-59	46.5
WP_167801492.1\|2038131_2038554_+	DUF4406 domain-containing protein	NA	NA	NA	NA
WP_167801493.1\|2038550_2040821_+	DNA primase	A0A1B0RXC5	Streptococcus_phage	5.6e-206	49.7
WP_167801494.1\|2040975_2041254_+	VRR-NUC domain-containing protein	D2J049	Enterococcus_phage	5.8e-17	44.9
WP_167801495.1\|2041234_2042599_+	DEAD/DEAH box helicase	A0A1W6JQF1	Corynebacterium_phage	3.0e-162	62.8
WP_167801496.1\|2042595_2043060_+	hypothetical protein	NA	NA	NA	NA
WP_167801497.1\|2043227_2043602_+	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	2.1e-33	52.1
WP_065415520.1\|2043851_2044436_+\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	1.3e-45	49.2
WP_065415515.1\|2044432_2044765_-	TfoX/Sxy family protein	NA	NA	NA	NA
WP_167801498.1\|2044917_2046096_+	methionine adenosyltransferase	A0A2K5B278	Erysipelothrix_phage	3.6e-92	49.4
WP_167801499.1\|2046067_2047315_+	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	3.4e-141	59.8
WP_167801500.1\|2047412_2048165_+	hypothetical protein	A0A2K5B280	Erysipelothrix_phage	1.6e-16	28.3
WP_167801501.1\|2048161_2048368_+	DUF4314 domain-containing protein	NA	NA	NA	NA
WP_167801502.1\|2048582_2048885_+	hypothetical protein	NA	NA	NA	NA
WP_167801503.1\|2049051_2049369_+	hypothetical protein	NA	NA	NA	NA
WP_167801504.1\|2049683_2051288_+\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	1.0e-238	75.6
WP_108726224.1\|2051259_2051868_+	GNAT family N-acetyltransferase	D0R097	Streptococcus_phage	1.7e-29	39.5
WP_167801505.1\|2051947_2053210_+\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	1.4e-171	73.9
WP_167801506.1\|2053206_2053968_+\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	6.9e-60	58.2
WP_167801507.1\|2053987_2055202_+\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	1.8e-118	54.6
WP_167801508.1\|2055238_2055553_+\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	2.4e-27	57.4
WP_167801629.1\|2055583_2055910_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_167801509.1\|2055902_2056337_+	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_167801510.1\|2056333_2056678_+	hypothetical protein	A0A2K5B293	Erysipelothrix_phage	3.6e-16	37.9
WP_167801511.1\|2056693_2057305_+\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	3.8e-77	73.2
WP_167801512.1\|2057304_2057691_+	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	7.8e-28	52.8
WP_167801513.1\|2057878_2058508_-	hypothetical protein	NA	NA	NA	NA
WP_167801514.1\|2058561_2061210_+	tape measure protein	A0A2K9V3J7	Faecalibacterium_phage	2.8e-39	39.7
WP_167801515.1\|2061209_2061905_+	hypothetical protein	NA	NA	NA	NA
WP_167801516.1\|2061928_2064940_+	peptidase	A0A2H4JFY7	uncultured_Caudovirales_phage	1.2e-62	37.2
WP_167801517.1\|2064959_2065385_+	DUF1617 family protein	K4I4C5	Lactobacillus_phage	7.6e-08	29.0
WP_126720530.1\|2065374_2065578_+	hypothetical protein	NA	NA	NA	NA
WP_167801518.1\|2065646_2066084_+\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	7.2e-38	61.1
WP_167801519.1\|2066076_2066853_+	N-acetylmuramoyl-L-alanine amidase	A0A221J6T7	Arthrobacter_phage	5.4e-28	53.4
WP_167801520.1\|2067010_2067421_+	RNA polymerase subunit sigma-70	NA	NA	NA	NA
WP_167801521.1\|2067417_2067639_+	dihydroorotase	NA	NA	NA	NA
WP_167801630.1\|2067657_2069322_+	recombinase family protein	Q6DMS6	Streptococcus_phage	6.3e-58	36.1
WP_167801522.1\|2069321_2070911_+	recombinase family protein	Q6DMS5	Streptococcus_phage	1.4e-126	47.2
WP_063978651.1\|2070984_2072439_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_011152926.1\|2073847_2073895_-	erythromycin resistance leader peptide	NA	NA	NA	NA
WP_063978651.1\|2073933_2075388_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_011152925.1\|2075841_2076696_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	E4ZFQ0	Streptococcus_phage	1.2e-12	27.6
WP_011152926.1\|2076795_2076843_-	erythromycin resistance leader peptide	NA	NA	NA	NA
WP_167801523.1\|2078746_2079490_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	3.8e-39	40.3
WP_167801524.1\|2079686_2080832_+	galactokinase	NA	NA	NA	NA
WP_108252045.1\|2080942_2081968_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_024964409.1\|2082048_2082333_+	hypothetical protein	NA	NA	NA	NA
WP_167801525.1\|2082355_2083456_-	DUF2183 domain-containing protein	NA	NA	NA	NA
WP_167801526.1\|2083662_2084433_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_167801527.1\|2084630_2086121_+	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.2e-16	25.5
WP_025296747.1\|2086128_2087151_+	ABC transporter permease	NA	NA	NA	NA
WP_024964414.1\|2087147_2088131_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_167801528.1\|2088150_2088603_-	carbohydrate kinase family protein	NA	NA	NA	NA
WP_167801529.1\|2088645_2089125_-	carbohydrate kinase family protein	NA	NA	NA	NA
WP_167801530.1\|2089194_2090550_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_167801531.1\|2091086_2091692_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_167801532.1\|2091688_2092948_-	MFS transporter	NA	NA	NA	NA
WP_167801533.1\|2093233_2094097_-	HAD family phosphatase	NA	NA	NA	NA
WP_167801534.1\|2094101_2095382_-\|tRNA	serine--tRNA ligase	A0A2K9L088	Tupanvirus	3.5e-56	33.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050810

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection