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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP050813 Yokenella regensburgei strain W13 plasmid pYRW13-131, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP050811 Yokenella regensburgei strain W13 chromosome, complete genome 1 crisprs cas3,csa3,DinG,DEDDh,RT,WYL 0 0 8 0
NZ_CP050812 Yokenella regensburgei strain W13 plasmid pYRW13-125, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP050811
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050811_1 4915426-4915514 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 434541 : 485351 64 Escherichia_phage(64.29%) plate,protease,terminase,holin,tail,integrase attL 435994:436009|attR 447766:447781
DBSCAN-SWA_2 603241 : 649931 37 Bodo_saltans_virus(16.67%) tail,transposase,tRNA,holin NA
DBSCAN-SWA_3 1651535 : 1746035 85 Salmonella_phage(26.19%) capsid,tRNA,terminase,holin,tail,head,integrase attL 1705000:1705055|attR 1746163:1746218
DBSCAN-SWA_4 1775395 : 1827647 75 Salmonella_phage(25.0%) transposase,coat,terminase,lysis,head,integrase attL 1767810:1767825|attR 1832887:1832902
DBSCAN-SWA_5 1840700 : 1851030 10 Burkholderia_phage(28.57%) NA NA
DBSCAN-SWA_6 2519159 : 2583754 69 Salmonella_phage(34.04%) plate,capsid,tRNA,terminase,holin,tail,lysis,portal,head,integrase attL 2523381:2523397|attR 2580195:2580211
DBSCAN-SWA_7 2756582 : 2765502 8 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_8 4904528 : 4947503 60 Salmonella_phage(21.28%) terminase,holin,tail,head,integrase attL 4904469:4904515|attR 4947691:4947737
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP050812
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 11524 : 64857 53 Escherichia_phage(17.65%) integrase,transposase attL 8274:8287|attR 60009:60022
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage