CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP050824	Klebsiella pneumoniae strain Bckp091 plasmid pBckp091-2, complete sequence	0 crisprs	NA	0	0
NZ_CP050825	Klebsiella pneumoniae strain Bckp091 plasmid pBckp091-3, complete sequence	0 crisprs	NA	0	0
NZ_CP050823	Klebsiella pneumoniae strain Bckp091 plasmid pBckp091-1, complete sequence	1 crisprs	csa3,WYL	2	2
NZ_CP050822	Klebsiella pneumoniae strain Bckp091 chromosome, complete genome	1 crisprs	csa3,cas3,DEDDh,DinG,WYL	0	5

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050823_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050823_1

121857-122016

Orphan

Consensus_repeat	Method
GCAGGAACAACGGGTGTCTACTGTAGGCGACAACCCACGCACC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP050823_1

>merge|NZ_CP050823|1|121857-122016|PILER-CR
GCAGGAACAACGGGTGTCTACTGTAGGCGACAATCCACGTACCGGATAGGTTCTGAAGGTAATTGTCTACTGTATGCGACGTGCGGTTGAATGGCCCGGCATAGCCGGTTATGCCTAGCAGGAACAACGGGTGTCTACTGTAGGCGACAACTCACGCACC

>NZ_CP050823|1|1|121857-122016|PILER-CR
GCAGGAACAACGGGTGTCTACTGTAGGCGACAATCCACGTACC	GGATAGGTTCTGAAGGTAAT
TGTCTACTGTATGCGACGTGCGGTTGAATGGCCCGGCATAGCC	GGTTATGCCTAGCAGGAACAACGGGTGTCTACTGTAG
GCGACAACTCACGCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050823.1\|WP_004026552.1\|115507_115825_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_029497499.1\|131998_132523_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_088941748.1\|125338_126501_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP050823.1\|WP_004184534.1\|136552_137317_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|136670
NZ_CP050823.1\|WP_032435708.1\|120660_121317_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_004026560.1\|118925_119825_+\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_077254792.1\|134292_135639_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379267
NZ_CP050823.1\|WP_032435645.1\|113322_114282_+\|DNA-replication-protein	unknown	unknown	gnl\|CDD\|368456
NZ_CP050823.1\|WP_004197568.1\|115033_115357_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_047683480.1\|124620_125073_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_011251285.1\|127322_127634_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227025
NZ_CP050823.1\|WP_016946352.1\|117203_117458_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|368385
NZ_CP050823.1\|WP_032435642.1\|112872_113280_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_032435650.1\|115890_117027_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271180
NZ_CP050823.1\|WP_011251286.1\|127630_128050_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227786
NZ_CP050823.1\|WP_029497501.1\|133428_134232_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_032435651.1\|117543_118605_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_117055985.1\|129992_130457_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_117055987.1\|114278_115037_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050823.1\|WP_004026564.1\|123182_124118_+\|omptin-family-outer-membrane-protease-Kop	unknown	unknown	gnl\|CDD\|236813

Protein	Function_ID	Function_description	E-value
NZ_CP050823.1\|WP_011251285.1\|127322_127634_+\|hypothetical-protein	gnl\|CDD\|227025	COG4680, COG4680, Uncharacterized protein conserved in bacteria [Function unknown].	2.18037e-30
NZ_CP050823.1\|WP_016946352.1\|117203_117458_+\|transcriptional-regulator	gnl\|CDD\|368385	pfam05321, HHA, Haemolysin expression modulating protein. This family consists of haemolysin expression modulating protein (HHA) homologs. YmoA and Hha are highly similar bacterial proteins downregulating gene expression in Yersinia enterocolitica and Escherichia coli, respectively.	2.38294e-17
NZ_CP050823.1\|WP_032435650.1\|115890_117027_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271180	cd00799, INT_Cre_C, C-terminal catalytic domain of Cre recombinase (also called integrase). Cre-like recombinases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The bacteriophage P1 Cre recombinase maintains the circular phage replicon in a monomeric state by catalyzing a site-specific recombination between two loxP sites. The catalytic core domain of Cre recombinase is linked to a more divergent helical N-terminal domain, which interacts primarily with the DNA major groove proximal to the crossover region.	3.27528e-12
NZ_CP050823.1\|WP_088941748.1\|125338_126501_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.42332e-65
NZ_CP050823.1\|WP_004184534.1\|136552_137317_-\|ATP-binding-protein	gnl\|CDD\|136670	PRK08181, PRK08181, transposase; Validated.	6.26548e-74
NZ_CP050823.1\|WP_011251286.1\|127630_128050_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227786	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription].	1.92327e-30
NZ_CP050823.1\|WP_032435645.1\|113322_114282_+\|DNA-replication-protein	gnl\|CDD\|368456	pfam05472, Ter, DNA replicatioN-terminus site-binding protein (Ter protein). This family contains several bacterial Ter proteins. The Ter protein specifically binds to DNA replicatioN-terminus sites on the host and plasmid genome and then blocks progress of the DNA replication fork.	6.70386e-14
NZ_CP050823.1\|WP_077254792.1\|134292_135639_-\|ISNCY-family-transposase	gnl\|CDD\|379267	pfam13565, HTH_32, Homeodomain-like domain.	3.72985e-09
NZ_CP050823.1\|WP_004026564.1\|123182_124118_+\|omptin-family-outer-membrane-protease-Kop	gnl\|CDD\|236813	PRK10993, PRK10993, omptin family outer membrane protease.	2.20779e-177

>NZ_CP050823.1|WP_032435708.1|120660_121317_+|hypothetical-protein
MMFWNQKKKEKAATGNEKKRFDHLLSVAEKLPVMTLPDLIRAIVRPIQSDFLLAVAEEGTDARPNMTPEKFFFEELIHVKSYEKMKEHEMDGADYPLSLASDMVLPWPWSLQRFINNVSRIGSYKGKPWKQDNSNHYVELWLPWRIGFVGGGNHSITAGILAGEGTLIPEHVYDMSWLFELVRTDGNHWFVDDHKVEAVKSGRSAAVFEIGRLLVEGA
>NZ_CP050823.1|WP_004026560.1|118925_119825_+|RepB-family-plasmid-replication-initiator-protein
MSNKINESYLNVEEINQTTGEVITLSSTSETSVQTVPLMRLGVFVPTLKSTNKAIAKKSNVGSNINASDDLRHLELAKSEGFERITISGPRLDMDTDFKVWTGIISVLTDNELESNEDGTISIRFTEFAMRCGFSRGRLKAEFREKIKDSLRKLMSNVVEFSKDRGTNIEVTKFVQLIGESTVDIGNDKVILTPSKTLKDLYVGEYKILLKLRALKALARKESAQALYTFIEALPPNPIPVSIERFRKRLSLTSRPALQNSTVRKALKQLEDIGYLEYQELKEGNKIAFQIIKRNPSLK
>NZ_CP050823.1|WP_032435651.1|117543_118605_+|hypothetical-protein
MRRNAQKWIPFGFDTDSNKIVDIASVENGLSCNCICLICGTSLIARQGQNKKWHFSHSTEVKGVCSELTLQHIKKYIKVKIQEKKYLALPHLLQGKEKGIVNLKNLAGGGIVCGLNADLTGICNDTTIGIFINDTSEDIQPNPDLLAQTDQLALVEIDAVRIESIIAPYRENGEGIKMMDAIEKLLFTSDEAKRWIYHPLMQTASPHTLHQYKRHLNASGNQLLSMIPVDLPMNMNSLPLAPAQQWQHLRWTIEILAKLTRADIPSGSSVFDELVSYAPRMLDSWESINVPAYERWYDYYISKRGEGGLNEAEQEYISFIVKIANWNVSIHNLPEFDRERAFHDWFLTHDPNK
>NZ_CP050823.1|WP_016946352.1|117203_117458_+|transcriptional-regulator
MLKSPNAHSSLRETYLLKFRKCSTTETLDRVFERILDKLNDEGGDINKITSLNGAYDHRRAEIYMKKNYDKIPASVWHLIPDEI
>NZ_CP050823.1|WP_032435650.1|115890_117027_-|tyrosine-type-recombinase/integrase
MTDKTKLVAISRTDDMSALDALKLLRFRRYNTARSQLRVTSVWSAWCARHGLTPFPVTAVDVERYINGLNGSVKMATISHFIACLSSVNSSLGFPDFRNVLIKALVQVWRARENEKKIVTGQALPFLISDLNILRRSLHKSDDLRDIRDLAMIWVGFETLLRNVEIRRIKTGDLKWQNDTSCYLLDVMRTKTSLSSNLTFQLSPQCSQHVRRLIETVEYTDTETFGHRFLFQPVNIHTNRYFPSTSSKLSRGKSIDRMLVKAGFSEGLLTQLQNESKISREDVGMLSSNSLNQAFARLWGIAGKVGDSNRQSGRYRTWTGHSVRVGGAIELFKAGYSLEKITEMGNWSDPKMVFRYIRGYLASEKAMVSFMRNHLDDI
>NZ_CP050823.1|WP_004026552.1|115507_115825_+|hypothetical-protein
MNNKRTITTREQIKINGEIRERTATHIVTGAHGYETLCISGYIVEHNEMGEVIHNSEKLAEDLLPVTCPTCRVIWYHTHEFTLDDFDSLSGKGDFVVTDLKELNI
>NZ_CP050823.1|WP_004197568.1|115033_115357_+|hypothetical-protein
MTYAIFLLVTAVCAFGLNYLTNKICSGTGMINQSGGSNVHALRCITSFLLLLVSLWLPVKPAVINLAVEFAALVNFIASVTLYTVANFREKRRLKKQRKEEKAAQKG
>NZ_CP050823.1|WP_117055987.1|114278_115037_+|hypothetical-protein
MSRILTGICEADPARRLYKVAVSRGNTFLSAKERFRVQVCFKNAITHPDEDRLLAELLTVHHFLADTSILWHMEQKTYACTTTWATTSTWLPEIYQRQASTPNVVKIIKFMHARFPGLKTVAETNEQGYEQALTSVDFEIPYWPVLPKFESDIGTIQVTIAGMIRYTETMSNKDCKTPLDLMIKSFKSGLIPIEKMPLSKTKRLMPLNINTAGKIFTHATWPRCRYIFVPDEAGVMKVVNVVKLRLKPLEEK
>NZ_CP050823.1|WP_032435645.1|113322_114282_+|DNA-replication-protein
MNTDFAHYNEEQLRKLGELHSLLRHSDIGSSYLASLPEPRSVEELNPPQEINVTHSVPDVDTLVDIYRQQRVDKVHVRDEHYSTKITRKYPGFVVVRNNHDQVMSLVGEINRLRDKFADAVKAITHYQDSRSEILHQVYPWLVTLQVSRNIRVVTEQIRSLGFTWQIPVIHKFTRLETVIDRLRREITELQPDISLTKQDVERLKQERTEEIMMLSLLNDEVSHDDENLRKFRLIRESNFPAVNVNIRYTSPEDPDDVHGPYKLNFRAPLPLILFSEPGRFNPLKNYVKGERQKRGDFNEKYRSVLPRIGLVEVIRESK
>NZ_CP050823.1|WP_032435642.1|112872_113280_+|hypothetical-protein
MSKVHCIRGITWKNSDSASFKVYACIAAVFSLGLVTATVRNYEILQLTVPYTWYVFFTAFWLLFPSFTVSFREREGRLFTSMGFYGLKLVTLDRPVSDGYWLVTMEKNRYRLVRVCRDGRRQPVWLTFKSLPEFV
>NZ_CP050823.1|WP_004026564.1|123182_124118_+|omptin-family-outer-membrane-protease-Kop
MNKSTIALMMAMLSGTAYADSTQLTPNFSPESVTVSTSAGMLSGKSHEMVYDTGTGRKVSQLDWKIKNVAILKGDISWDAYSFLTLNARGWTSLASGAGHMDDYDWMNDNQSGWTDHSSHPSTNVNYANEFDLNAKGWVFQNENYKAGVMAGYQETRFSWTATGGSYNYDNGAYTGEFPAGERGIGYSQRFSMPYIGLVGQYRINDFEFNALFKFSDWVRAHDNDEHYMRDLTFREKTTSSRYYGTSIDAGYYVTPNAKVFAEFTYSKYEEAKGGTQIIDTNSGESASIGGDAAGISNKNYTITAGLQYRF
>NZ_CP050823.1|WP_047683480.1|124620_125073_+|hypothetical-protein
MFLGGRCYTAKQLEKDYLSEVAGYSDDRWEAPQRAARLAAAVKRYKTSEMLRFIFATIAYDPDPDLTPLAVRRLCQALFGRTGSQWLIVEIFGVKGRQHRSDDSTPESVEKMATRYRHAAGLHWAATLAEIEREKRNYQTQVKASRKGEG
>NZ_CP050823.1|WP_088941748.1|125338_126501_+|IS3-family-transposase
MTKPTSTTKKPRKQHTPEFRQEALKLAERIGVAAAARELNLYESQLYNWRSKQQNQLSSSEREQEMSAEIARLKRQLAERDEELAILPKGRDILREAPEMKYVFIEKHQAEFSIKAMCRVLQVTRSGWYIWHQRRYQVNRRQQFRLVCDNVVREAFSDAKQRYGAPRLTDELRAQGYRFNVKTVAASLRRQGLRAKASRKFSPVSYREHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIGWSMSSRMTAQLACDALQMALWRRKRPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVECIHGEDFVSREIMRTAVFNYIECDYNRWRRHSACGGLSPEQFENQNLA
>NZ_CP050823.1|WP_011251285.1|127322_127634_+|hypothetical-protein
MHVISKEPFEEAAKRYPNDSLAIRALYRLVRETDFSSPAEMLTLIPSLDNFKYRNKWWVLDVGGNNLRVIAYINFVNKRFYVKHIATHADYDKLTRYYRENKE
>NZ_CP050823.1|WP_011251286.1|127630_128050_+|helix-turn-helix-domain-containing-protein
MITDTAKAIEATKQLVAAVPFLGGSSSESDYREAMELVDYLIENDDENPLIDFLASKIADYEDNSPRFAEFNKAIAEIPVGVALLRTLIDQHKLSYSDLKDEIGSKSLVSQILSGQRSLTITHIKALSARFGVKPEWFL
>NZ_CP050823.1|WP_117055985.1|129992_130457_-|hypothetical-protein
MNPIITAHQEIVIENSVRYIELLKSEATKILDEYWENWKARNQLISQTTYANGGEFMPGRFAPVFKKVGSSQKLTIVWKDFSPRFKNKIEHHGVVVKPKLGGYSVSCFKNALDWELEMFLETENKIKPIRELLAEYHQRKLADIKRLEKLKRLI
>NZ_CP050823.1|WP_029497499.1|131998_132523_+|hypothetical-protein
MGFKKSEVSQLNSLASAIKLMEFDANKYTMTHLYGRKVADSLEYPKGINTRKGVGKWLGEKSAMLLSNVVVNNSIHIFGYDTQNPTESTREMDFNALVDLLINTGYTPEYYPLKVNRIVEVLNGMSEADYKDYCLVCKKPFIHAPDRYDSCPTCSAKKCKVAIMRYYQSVVPFE
>NZ_CP050823.1|WP_029497501.1|133428_134232_-|hypothetical-protein
MIKFPTKKRVDLYKNAVSSEQLQLDLAAAQEFMFDAWETDDLDVVLKLIRKAIKKSPLCADAYSFYCEISEEPPESKIGTLETALYAASVALGEDFQEFAGNFWGFVETRPYMRAKAALADALWESGNFYPAMSHCHEMLKLNPNDNQGIRHLLANYYLELEMVDDLSVLLDDYSGDMRPFLQYTRALLAYRQSSPDADDIAKAAISSNKHIPSLLSKCKLQPKSNSGYITLGEMDEAIDYINHNIKPWIRTPNAIEWIMNISSANK
>NZ_CP050823.1|WP_077254792.1|134292_135639_-|ISNCY-family-transposase
MSDKEIHRLPVIQAVCEKRLRRRDAASQLGISERQAQRLINRYRVSGAEGLVSRKRGKPSNRRLTESLKMRVLTLIRENYSDFGPTLAAEKLRERHNIRLSIETVRNWMTSDGIWIPHARRKSRVYQPRHRRDCLGELIQIDGSHHDWFEGRAPKCCLLVFIDDATGRLMHLRFSESETAFDYMLATREYIEQHGKPVSLYSDKHAIFRVSGPENRNTTVSQFGRVLYDLAIELICANSSEAKGRVERANQTLQDRLIKEMRLEGITGIEAANAWLATFIADFNRRFSRPVRFPKDLHRPVKENPDELRDIFAWHDVRTVSKSLTFQYDKILYLMDPTEENSRLAGEKIKVLDYPDGTLAFHYGHRSLECQAFDKLACVDQGQIVDNKRLGTVLRLAQVKQDERENEGKRERSKKSPSRKAQVRIQEQLRAINPVLADPNLFVASSKR
>NZ_CP050823.1|WP_004184534.1|136552_137317_-|ATP-binding-protein
MTDIHTLERLLRRLRLTRIATEWHSQEKRALAEGWTPSRYLLSLCSEEATYRESERLRRYIKDARLPVGKTLAEYDFGQVPELNAAQVRQLCETTDWVDSGENVLLFGASGLGKSHLAAAIADGVVSQGHRVRFYSAGELLQELRKARSLLRLNEMLLKLDRYRVIVIDDLGYVKRDNAETGVLFELIAHRYERGSLIITSNHPFSTWGSIFVDETMAVAAADRLIHHGYIFEVTGESYRKKTSKAVTQQSAKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP050823_1	1.1\|121900\|20\|NZ_CP050823\|PILER-CR	121900-121919	20	NZ_CP023417	Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence	290700-290719	0	1.0
NZ_CP050823_1	1.1\|121900\|20\|NZ_CP050823\|PILER-CR	121900-121919	20	NZ_CP028791	Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence	182565-182584	0	1.0
NZ_CP050823_1	1.1\|121900\|20\|NZ_CP050823\|PILER-CR	121900-121919	20	NZ_CP050823	Klebsiella pneumoniae strain Bckp091 plasmid pBckp091-1, complete sequence	121900-121919	0	1.0
NZ_CP050823_1	1.1\|121900\|20\|NZ_CP050823\|PILER-CR	121900-121919	20	NZ_CP041024	Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence	65789-65808	0	1.0
NZ_CP050823_1	1.1\|121900\|20\|NZ_CP050823\|PILER-CR	121900-121919	20	NZ_MN058044	Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence	42375-42394	0	1.0
NZ_CP050823_1	1.1\|121900\|20\|NZ_CP050823\|PILER-CR	121900-121919	20	NZ_MG288682	Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence	140382-140401	0	1.0
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP028791	Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence	182511-182547	0	1.0
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_MN058044	Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence	42321-42357	0	1.0
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_MG288682	Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence	140328-140364	0	1.0
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP050823	Klebsiella pneumoniae strain Bckp091 plasmid pBckp091-1, complete sequence	121937-121973	0	1.0
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP041024	Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence	65826-65862	0	1.0
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP023417	Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence	290179-290215	1	0.973
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP023417	Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence	290646-290682	1	0.973
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	MN543579	Klebsiella pneumoniae strain PM48 plasmid pPM48_140, complete sequence	102806-102842	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	MN543581	Klebsiella pneumoniae strain PM48TC plasmid pPM48TC_fusion, complete sequence	197540-197576	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP045662	Klebsiella pneumoniae strain SMU18037509 plasmid unnamed1, complete sequence	103219-103255	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	LR134207	Klebsiella aerogenes strain NCTC9667 genome assembly, plasmid: 2	72277-72313	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP031815	Klebsiella pneumoniae strain KSB1_7F-sc-2280268 plasmid unnamed1, complete sequence	121034-121070	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_AP019689	Klebsiella quasipneumoniae strain SNI47 plasmid pTMSNI47-2, complete sequence	163312-163348	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP017930	Klebsiella oxytoca strain CAV1015 plasmid pCAV1015-114, complete sequence	69199-69235	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP017930	Klebsiella oxytoca strain CAV1015 plasmid pCAV1015-114, complete sequence	69668-69704	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP026166	Klebsiella pneumoniae strain F81 plasmid pF81_2, complete sequence	198410-198446	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP033758	Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed2	38247-38283	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP033758	Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed2	228773-228809	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP035203	Klebsiella pneumoniae strain LH94 plasmid pLH94-1, complete sequence	44762-44798	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP031258	Klebsiella quasipneumoniae strain L22 plasmid pL22-1, complete sequence	70069-70105	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP031790	Klebsiella pneumoniae strain KSB1_1I-sc-2280289 plasmid unnamed1, complete sequence	3116-3152	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP011617	Klebsiella oxytoca strain CAV1335 plasmid pCAV1335-115, complete sequence	48752-48788	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP011617	Klebsiella oxytoca strain CAV1335 plasmid pCAV1335-115, complete sequence	49221-49257	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP011596	Klebsiella oxytoca strain CAV1099 plasmid pCAV1099-114, complete sequence	47425-47461	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP011596	Klebsiella oxytoca strain CAV1099 plasmid pCAV1099-114, complete sequence	47894-47930	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	CP052373	Klebsiella pneumoniae strain D16KP0042 plasmid pD16KP0042-1, complete sequence	49366-49402	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP018338	Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-2, complete sequence	186633-186669	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP018339	Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-1, complete sequence	196695-196731	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP054064	Klebsiella pneumoniae strain WSHvKP plasmid pSWHvKp, complete sequence	148434-148470	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_MK715436	Klebsiella pneumoniae subsp. pneumoniae strain SCNJ1 plasmid pVir-SCNJ1, complete sequence	32247-32283	2	0.946
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP028791	Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence	181926-181962	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP028791	Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence	182044-182080	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_MN058044	Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence	42086-42122	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_MG288682	Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence	139743-139779	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_MG288682	Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence	139861-139897	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP041024	Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence	66061-66097	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP023417	Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence	289476-289512	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP023417	Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence	289594-289630	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NC_011282	Klebsiella variicola strain 342 plasmid pKP187, complete sequence	184851-184887	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	CP023135	Klebsiella pneumoniae subsp. pneumoniae strain KpvK54 plasmid pKpvK54, complete sequence	73775-73811	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_AP019666	Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence	146591-146627	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_AP019666	Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence	146709-146745	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_AP019666	Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence	146827-146863	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP030270	Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-vir, complete sequence	217495-217531	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP030270	Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-vir, complete sequence	217613-217649	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	46271-46307	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	64168-64204	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	38313-38349	3	0.919
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NC_011282	Klebsiella variicola strain 342 plasmid pKP187, complete sequence	184499-184535	4	0.892
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_AP019666	Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence	146473-146509	4	0.892
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP030270	Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-vir, complete sequence	201258-201294	4	0.892
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP031809	Klebsiella pneumoniae strain INF206-sc-2280074 plasmid unnamed, complete sequence	195159-195195	5	0.865
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_MN058044	Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence	41850-41886	6	0.838
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_CP041024	Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence	66297-66333	6	0.838
NZ_CP050823_1	1.2\|121963\|37\|NZ_CP050823\|PILER-CR	121963-121999	37	NZ_AP019666	Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence	146355-146391	6	0.838

1. spacer 1.1|121900|20|NZ_CP050823|PILER-CR matches to NZ_CP023417 (Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence) position: , mismatch: 0, identity: 1.0

ggataggttctgaaggtaat	CRISPR spacer
ggataggttctgaaggtaat	Protospacer
********************

2. spacer 1.1|121900|20|NZ_CP050823|PILER-CR matches to NZ_CP028791 (Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence) position: , mismatch: 0, identity: 1.0

ggataggttctgaaggtaat	CRISPR spacer
ggataggttctgaaggtaat	Protospacer
********************

3. spacer 1.1|121900|20|NZ_CP050823|PILER-CR matches to NZ_CP050823 (Klebsiella pneumoniae strain Bckp091 plasmid pBckp091-1, complete sequence) position: , mismatch: 0, identity: 1.0

ggataggttctgaaggtaat	CRISPR spacer
ggataggttctgaaggtaat	Protospacer
********************

4. spacer 1.1|121900|20|NZ_CP050823|PILER-CR matches to NZ_CP041024 (Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence) position: , mismatch: 0, identity: 1.0

ggataggttctgaaggtaat	CRISPR spacer
ggataggttctgaaggtaat	Protospacer
********************

5. spacer 1.1|121900|20|NZ_CP050823|PILER-CR matches to NZ_MN058044 (Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence) position: , mismatch: 0, identity: 1.0

ggataggttctgaaggtaat	CRISPR spacer
ggataggttctgaaggtaat	Protospacer
********************

6. spacer 1.1|121900|20|NZ_CP050823|PILER-CR matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 0, identity: 1.0

ggataggttctgaaggtaat	CRISPR spacer
ggataggttctgaaggtaat	Protospacer
********************

7. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP028791 (Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggcccggcatagccggttatgccta	Protospacer
*************************************

8. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_MN058044 (Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggcccggcatagccggttatgccta	Protospacer
*************************************

9. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggcccggcatagccggttatgccta	Protospacer
*************************************

10. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP050823 (Klebsiella pneumoniae strain Bckp091 plasmid pBckp091-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggcccggcatagccggttatgccta	Protospacer
*************************************

11. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP041024 (Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggcccggcatagccggttatgccta	Protospacer
*************************************

12. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP023417 (Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence) position: , mismatch: 1, identity: 0.973

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggcccggcatagccggttatgcctg	Protospacer
************************************.

13. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP023417 (Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence) position: , mismatch: 1, identity: 0.973

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggcccggcatagccggttatgcctg	Protospacer
************************************.

14. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to MN543579 (Klebsiella pneumoniae strain PM48 plasmid pPM48_140, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

15. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to MN543581 (Klebsiella pneumoniae strain PM48TC plasmid pPM48TC_fusion, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

16. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP045662 (Klebsiella pneumoniae strain SMU18037509 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

17. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to LR134207 (Klebsiella aerogenes strain NCTC9667 genome assembly, plasmid: 2) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

18. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP031815 (Klebsiella pneumoniae strain KSB1_7F-sc-2280268 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

19. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_AP019689 (Klebsiella quasipneumoniae strain SNI47 plasmid pTMSNI47-2, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

20. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP017930 (Klebsiella oxytoca strain CAV1015 plasmid pCAV1015-114, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

21. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP017930 (Klebsiella oxytoca strain CAV1015 plasmid pCAV1015-114, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

22. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP026166 (Klebsiella pneumoniae strain F81 plasmid pF81_2, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

23. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP033758 (Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed2) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

24. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP033758 (Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed2) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

25. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP035203 (Klebsiella pneumoniae strain LH94 plasmid pLH94-1, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

26. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP031258 (Klebsiella quasipneumoniae strain L22 plasmid pL22-1, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

27. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP031790 (Klebsiella pneumoniae strain KSB1_1I-sc-2280289 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

28. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP011617 (Klebsiella oxytoca strain CAV1335 plasmid pCAV1335-115, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

29. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP011617 (Klebsiella oxytoca strain CAV1335 plasmid pCAV1335-115, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

30. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP011596 (Klebsiella oxytoca strain CAV1099 plasmid pCAV1099-114, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

31. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP011596 (Klebsiella oxytoca strain CAV1099 plasmid pCAV1099-114, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

32. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to CP052373 (Klebsiella pneumoniae strain D16KP0042 plasmid pD16KP0042-1, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

33. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP018338 (Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-2, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

34. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP018339 (Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-1, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

35. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP054064 (Klebsiella pneumoniae strain WSHvKP plasmid pSWHvKp, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

36. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_MK715436 (Klebsiella pneumoniae subsp. pneumoniae strain SCNJ1 plasmid pVir-SCNJ1, complete sequence) position: , mismatch: 2, identity: 0.946

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgcctg	Protospacer
**************** *******************.

37. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP028791 (Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

38. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP028791 (Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

39. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_MN058044 (Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

40. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

41. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

42. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP041024 (Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

43. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP023417 (Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

44. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP023417 (Klebsiella pneumoniae strain 1050 plasmid pKp1050-1, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

45. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NC_011282 (Klebsiella variicola strain 342 plasmid pKP187, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatagccggttatgccgg	Protospacer
**************** ****************** .

46. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to CP023135 (Klebsiella pneumoniae subsp. pneumoniae strain KpvK54 plasmid pKpvK54, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatagccggttatgcccg	Protospacer
**************** ******************..

47. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_AP019666 (Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

48. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_AP019666 (Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

49. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_AP019666 (Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

50. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP030270 (Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-vir, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

51. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP030270 (Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-vir, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

52. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

53. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

54. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 3, identity: 0.919

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgcctg	Protospacer
**************** ***** *************.

55. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NC_011282 (Klebsiella variicola strain 342 plasmid pKP187, complete sequence) position: , mismatch: 4, identity: 0.892

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatgccgg	Protospacer
**************** ***** ************ .

56. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_AP019666 (Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence) position: , mismatch: 4, identity: 0.892

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgccgg	Protospacer
**************** ***** ************ .

57. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP030270 (Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-vir, complete sequence) position: , mismatch: 4, identity: 0.892

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccgggcatcgccggttatgccgg	Protospacer
**************** ***** ************ .

58. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP031809 (Klebsiella pneumoniae strain INF206-sc-2280074 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.865

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatgtcgg	Protospacer
**************** ***** **********.* .

59. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_MN058044 (Klebsiella pneumoniae strain KP1677 plasmid pKP1677, complete sequence) position: , mismatch: 6, identity: 0.838

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatcacag	Protospacer
**************** ***** *********  * .

60. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_CP041024 (Klebsiella pneumoniae strain KP1692 plasmid pKP1692, complete sequence) position: , mismatch: 6, identity: 0.838

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatcacag	Protospacer
**************** ***** *********  * .

61. spacer 1.2|121963|37|NZ_CP050823|PILER-CR matches to NZ_AP019666 (Klebsiella pneumoniae strain TA6363 plasmid pTMTA63631, complete sequence) position: , mismatch: 6, identity: 0.838

gtgcggttgaatggcccggcatagccggttatgccta	CRISPR spacer
gtgcggttgaatggccaggcatcgccggttatcacag	Protospacer
**************** ***** *********  * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

20782 : 80596

uncultured_Caudovirales_phage(42.11%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016151359.1\|20782_21751_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	8.7e-185	98.8
WP_004213565.1\|22030_23005_+	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA
WP_004206664.1\|23360_23711_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	1.1e-23	50.9
WP_004206665.1\|23762_24125_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_016151356.1\|24142_25894_+	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_155006902.1\|25941_27231_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.5e-171	73.8
WP_007779002.1\|27243_27669_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.3e-52	72.9
WP_004206671.1\|27701_28130_-	N-acetyltransferase	NA	NA	NA	NA
WP_164494899.1\|28251_30003_-	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_016151353.1\|30027_30390_-	arsenic metallochaperone ArsD family protein	NA	NA	NA	NA
WP_016151352.1\|30465_31011_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_016151351.1\|31019_31733_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.4e-91	76.6
WP_016151350.1\|31729_32056_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_007871777.1\|32387_32885_+	N-acetyltransferase	NA	NA	NA	NA
WP_167803472.1\|33152_34121_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.2e-180	96.6
WP_007896426.1\|34274_35600_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	6.5e-114	48.1
WP_016151347.1\|36843_37365_+	RNA polymerase sigma factor FecI	NA	NA	NA	NA
WP_004118237.1\|37361_38315_+	fec operon regulator FecR	NA	NA	NA	NA
WP_007898891.1\|38401_40726_+	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_004118241.1\|40770_41673_+	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_004118243.1\|41669_42668_+	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_004118246.1\|42664_43621_+	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA
WP_004152282.1\|43621_44389_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_004118251.1\|44487_44781_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-49	96.9
WP_007898884.1\|45111_45390_-	EAL domain-containing protein	NA	NA	NA	NA
WP_007898882.1\|45503_45929_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.9e-51	71.4
WP_007898880.1\|45941_47231_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	4.4e-168	71.1
WP_004206577.1\|47275_47596_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	2.9e-20	44.8
WP_016151343.1\|47681_48380_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.5e-90	69.4
WP_004206574.1\|48508_48814_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004206572.1\|48824_50030_-	chromate efflux transporter	NA	NA	NA	NA
WP_016151359.1\|50656_51625_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	8.7e-185	98.8
WP_032435706.1\|54095_55088_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_047683449.1\|56646_59706_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	95.7
WP_167803473.1\|59757_61011_+	lactose permease	NA	NA	NA	NA
WP_032435793.1\|62403_62730_-	hypothetical protein	NA	NA	NA	NA
WP_004118106.1\|62810_63707_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016151338.1\|63871_64948_-	dihydroorotase	NA	NA	NA	NA
WP_004118110.1\|64944_66201_-	Zn-dependent hydrolase	NA	NA	NA	NA
WP_004118113.1\|66237_67179_-	dihydroorotate dehydrogenase	A0A1V0SH91	Hokovirus	3.6e-18	32.6
WP_016151336.1\|67171_68020_-	hypothetical protein	NA	NA	NA	NA
WP_004118116.1\|68384_69641_+	MFS transporter	NA	NA	NA	NA
WP_004118118.1\|69853_71119_+	hypothetical protein	NA	NA	NA	NA
WP_000019441.1\|71487_72468_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
WP_167803474.1\|72525_72870_+	hypothetical protein	NA	NA	NA	NA
WP_004118092.1\|72966_73227_-	DUF2534 family protein	NA	NA	NA	NA
WP_032435791.1\|73283_75347_-	TonB-dependent copper receptor	NA	NA	NA	NA
WP_015065566.1\|75429_75849_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_032435790.1\|76233_76512_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_004181742.1\|76605_76818_-	hypothetical protein	NA	NA	NA	NA
WP_032435789.1\|77794_78109_+	hypothetical protein	NA	NA	NA	NA
WP_088941748.1\|78184_79347_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.3e-53	43.0
WP_167803475.1\|79600_80596_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	5.1e-172	91.3

DBSCAN-SWA_2

100438 : 111156

Salmonella_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017900946.1\|100438_101449_-	replication initiation protein	J9Q7H0	Salmonella_phage	1.1e-86	53.5
WP_023287153.1\|102178_103345_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.5e-223	97.2
WP_004117790.1\|103344_104316_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	7.0e-150	86.9
WP_032435629.1\|105684_106125_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.9e-18	59.0
WP_004189161.1\|106121_106472_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	5.2e-39	63.8
WP_167803477.1\|106502_108095_+\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.5e-177	62.0
WP_159106072.1\|108239_108518_+	hypothetical protein	NA	NA	NA	NA
WP_167803478.1\|108539_109508_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	5.7e-184	98.4
WP_004213807.1\|110187_111156_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	7.3e-14	28.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP050822

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050822_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050822_1

4299004-4299098

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050822_1

>merge|NZ_CP050822|1|4299004-4299098|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP050822|1|1|4299004-4299098|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050822.1\|WP_004177427.1\|4296098_4296758_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP050822.1\|WP_004147026.1\|4302656_4305005_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP050822.1\|WP_002888329.1\|4305059_4306346_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP050822.1\|WP_002888324.1\|4307337_4308159_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP050822.1\|WP_023342999.1\|4290634_4292992_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP050822.1\|WP_002888337.1\|4300854_4301553_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP050822.1\|WP_002888320.1\|4309815_4310295_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP050822.1\|WP_002888373.1\|4284324_4285092_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP050822.1\|WP_002888347.1\|4296832_4297372_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP050822.1\|WP_002888332.1\|4301585_4302413_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP050822.1\|WP_004178574.1\|4293179_4296086_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP050822.1\|WP_004177424.1\|4288123_4289626_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP050822.1\|WP_002888321.1\|4308543_4309392_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP050822.1\|WP_023342998.1\|4286403_4288113_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP050822.1\|WP_002888323.1\|4308161_4308539_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP050822.1\|WP_002888327.1\|4306351_4307341_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP050822.1\|WP_004145972.1\|4285220_4286066_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP050822.1\|WP_016531719.1\|4289763_4290459_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP050822.1\|WP_020802792.1\|4286051_4286222_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050822.1\|WP_002888340.1\|4299239_4300865_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827

Protein	Function_ID	Function_description	E-value
NZ_CP050822.1\|WP_004177427.1\|4296098_4296758_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	7.5539e-160
NZ_CP050822.1\|WP_004147026.1\|4302656_4305005_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP050822.1\|WP_002888329.1\|4305059_4306346_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP050822.1\|WP_002888324.1\|4307337_4308159_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP050822.1\|WP_002888320.1\|4309815_4310295_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP050822.1\|WP_002888337.1\|4300854_4301553_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP050822.1\|WP_002888373.1\|4284324_4285092_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP050822.1\|WP_002888347.1\|4296832_4297372_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP050822.1\|WP_002888332.1\|4301585_4302413_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP050822.1\|WP_023342999.1\|4290634_4292992_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP050822.1\|WP_004177424.1\|4288123_4289626_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP050822.1\|WP_002888321.1\|4308543_4309392_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP050822.1\|WP_023342998.1\|4286403_4288113_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP050822.1\|WP_002888323.1\|4308161_4308539_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP050822.1\|WP_002888327.1\|4306351_4307341_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP050822.1\|WP_004145972.1\|4285220_4286066_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP050822.1\|WP_016531719.1\|4289763_4290459_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP050822.1\|WP_004178574.1\|4293179_4296086_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP050822.1\|WP_002888340.1\|4299239_4300865_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173

>NZ_CP050822.1|WP_002888347.1|4296832_4297372_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP050822.1|WP_004177427.1|4296098_4296758_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVALVWGHPQPAEGLVDLPLICDWPNRPMQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP050822.1|WP_004178574.1|4293179_4296086_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP050822.1|WP_023342999.1|4290634_4292992_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLSDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIERRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP050822.1|WP_016531719.1|4289763_4290459_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQRIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP050822.1|WP_004177424.1|4288123_4289626_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP050822.1|WP_023342998.1|4286403_4288113_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKENVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYEDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>NZ_CP050822.1|WP_020802792.1|4286051_4286222_+|hypothetical-protein
MRFGHTRGSPRRYQWHQLSIFIILSLSALSRLRRRWEFGEKPAQQAKKAPVACIPP
>NZ_CP050822.1|WP_004145972.1|4285220_4286066_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP050822.1|WP_002888373.1|4284324_4285092_-|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR
>NZ_CP050822.1|WP_002888340.1|4299239_4300865_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP050822.1|WP_002888337.1|4300854_4301553_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP050822.1|WP_002888332.1|4301585_4302413_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP050822.1|WP_004147026.1|4302656_4305005_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP050822.1|WP_002888329.1|4305059_4306346_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP050822.1|WP_002888327.1|4306351_4307341_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP050822.1|WP_002888324.1|4307337_4308159_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP050822.1|WP_002888323.1|4308161_4308539_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP050822.1|WP_002888321.1|4308543_4309392_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP050822.1|WP_002888320.1|4309815_4310295_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1367488 : 1434831

Klebsiella_phage(44.23%)

transposase,tRNA,tail,integrase,protease,capsid,head,terminase,holin

attL 1390376:1390401|attR 1433788:1433813

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004145598.1\|1367488_1368907_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_002913435.1\|1368958_1369351_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_002913434.1\|1369354_1369708_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004151096.1\|1370212_1372384_+	EAL domain-containing protein	NA	NA	NA	NA
WP_002913423.1\|1372432_1373635_-	nucleoside permease NupC	NA	NA	NA	NA
WP_002913421.1\|1373981_1375223_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_002913419.1\|1375280_1375640_-	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_002913417.1\|1375770_1376763_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
WP_004159719.1\|1376943_1378605_+	indolepyruvate decarboxylase	NA	NA	NA	NA
WP_023280391.1\|1378601_1379837_-	ion channel protein	NA	NA	NA	NA
WP_002913377.1\|1380100_1381066_+	glucokinase	NA	NA	NA	NA
WP_004145587.1\|1381119_1381872_-	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	1.5e-14	26.3
WP_004149230.1\|1381868_1383566_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.7e-47	28.5
WP_004153200.1\|1383564_1383678_+	hypothetical protein	NA	NA	NA	NA
WP_004188912.1\|1383674_1383860_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA
WP_002913372.1\|1383948_1385163_+	alanine transaminase	NA	NA	NA	NA
WP_099119320.1\|1385233_1385305_-	membrane protein YpdK	NA	NA	NA	NA
WP_023282888.1\|1385643_1386840_-	cyanate transporter	NA	NA	NA	NA
WP_048292141.1\|1386836_1387295_-	nucleoside deaminase	NA	NA	NA	NA
WP_021440524.1\|1387427_1388336_+	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	4.6e-10	24.2
WP_032428359.1\|1388345_1389227_-	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	1.5e-05	56.8
WP_004174945.1\|1389594_1390077_-	WbuC family cupin fold metalloprotein	NA	NA	NA	NA
1390376:1390401	attL	NA	NA	NA	NA
WP_040186293.1\|1390595_1391780_+\|integrase	site-specific integrase	A0A2R2Z2Y0	Escherichia_phage	4.3e-202	85.8
WP_167803376.1\|1391845_1392652_+	hypothetical protein	NA	NA	NA	NA
WP_040186295.1\|1392928_1393489_-	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	1.0e-68	66.5
WP_167803377.1\|1393490_1394063_-	hypothetical protein	A0A0M4RTV1	Salmonella_phage	1.4e-17	53.9
WP_064783780.1\|1394059_1394272_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.4e-10	43.9
WP_167803378.1\|1394271_1394778_-	ead/Ea22-like family protein	K7P6V8	Enterobacteria_phage	5.9e-07	39.3
WP_167803379.1\|1394770_1394995_-	hypothetical protein	S4TVX5	Salmonella_phage	4.1e-13	49.2
WP_094818648.1\|1395309_1396170_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	1.0e-72	55.1
WP_104467618.1\|1396251_1397064_-	DUF2303 family protein	NA	NA	NA	NA
WP_004104278.1\|1397107_1397467_-	hypothetical protein	NA	NA	NA	NA
WP_114466249.1\|1397937_1398420_+	superinfection exclusion protein B	A4KWR7	Enterobacteria_phage	8.2e-51	61.2
WP_032422885.1\|1399022_1399697_-	LexA family transcriptional regulator	U5P0T5	Shigella_phage	3.3e-114	86.8
WP_029497185.1\|1399787_1399988_+	transcriptional regulator	U5P445	Shigella_phage	2.8e-21	76.9
WP_029497186.1\|1400031_1400547_+	hypothetical protein	A0A1C9II13	Salmonella_phage	1.5e-58	63.4
WP_004104272.1\|1401025_1401301_+	hypothetical protein	NA	NA	NA	NA
WP_167803380.1\|1401293_1402823_+	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	5.1e-203	67.1
WP_038806620.1\|1402819_1403791_+	DNA primase	A0A1B5FPA8	Escherichia_phage	3.9e-108	61.6
WP_114466240.1\|1403760_1404405_+	NinG family protein	A0A1W6JNX3	Morganella_phage	1.9e-39	54.3
WP_020317301.1\|1404401_1405046_+	SAM-binding domain protein	I6PDF5	Cronobacter_phage	2.0e-84	68.2
WP_029497192.1\|1405035_1405440_+	antitermination protein	S5M7R9	Escherichia_phage	5.5e-32	54.0
WP_001294159.1\|1405649_1406036_+	membrane protein	A0A192Y8P2	Salmonella_phage	1.6e-57	90.6
WP_000243811.1\|1406022_1406304_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.8e-19	48.4
WP_048297967.1\|1406303_1406933_+	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	2.9e-88	75.8
WP_048297966.1\|1406935_1407211_+	hypothetical protein	G8C7W1	Escherichia_phage	8.3e-16	51.7
WP_024176412.1\|1407718_1407919_+	hypothetical protein	A0A1L6Z528	Klebsiella_phage	2.9e-18	73.3
WP_048297965.1\|1408662_1408884_+	hypothetical protein	NA	NA	NA	NA
WP_032412813.1\|1408944_1409235_+	HNH endonuclease	A0A286N2R3	Klebsiella_phage	5.8e-52	95.8
WP_032412811.1\|1409247_1409457_+	hypothetical protein	A0A286N2R4	Klebsiella_phage	6.3e-24	84.1
WP_004143905.1\|1409579_1410014_+	hypothetical protein	A0A286S1P9	Klebsiella_phage	6.2e-74	100.0
WP_004143904.1\|1410023_1411556_+\|terminase	terminase	A0A286S1M9	Klebsiella_phage	3.9e-296	100.0
WP_004184534.1\|1412153_1412918_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	5.3e-36	36.0
WP_004184532.1\|1412914_1414414_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_004216821.1\|1415258_1415939_+\|head,protease	HK97 family phage prohead protease	A0A286S1N1	Klebsiella_phage	1.6e-124	100.0
WP_101979983.1\|1415950_1417114_+\|capsid	phage major capsid protein	A0A286S1R4	Klebsiella_phage	1.0e-211	99.7
WP_044067369.1\|1417150_1417393_+	hypothetical protein	NA	NA	NA	NA
WP_017880223.1\|1417340_1417667_+\|head,tail	phage gp6-like head-tail connector protein	A0A286S294	Klebsiella_phage	7.5e-56	100.0
WP_004143899.1\|1417727_1417925_+	hypothetical protein	A0A286S2A5	Klebsiella_phage	1.7e-26	100.0
WP_101979984.1\|1417926_1418259_+\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	2.5e-54	97.3
WP_000763233.1\|1418251_1418791_+	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	1.0e-94	100.0
WP_000561415.1\|1418787_1419153_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	3.9e-61	92.6
WP_000115125.1\|1419209_1419701_+	hypothetical protein	A0A286S1Q8	Klebsiella_phage	2.3e-88	100.0
WP_004899623.1\|1419744_1420128_+	hypothetical protein	A0A286S1N4	Klebsiella_phage	1.4e-53	86.3
WP_032432338.1\|1420130_1420394_+	hypothetical protein	A0A286S1P2	Klebsiella_phage	3.6e-40	92.0
WP_042346245.1\|1420457_1420850_+	hypothetical protein	A0A286S1N7	Klebsiella_phage	3.6e-20	42.2
WP_167803381.1\|1420919_1423466_+\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	76.3
WP_004899614.1\|1423465_1423945_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.7e-93	98.7
WP_032412796.1\|1423931_1424414_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	1.6e-83	96.9
WP_017880229.1\|1424423_1424804_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	4.6e-73	100.0
WP_167803382.1\|1424800_1427869_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	97.5
WP_167803383.1\|1427946_1430091_+	right-handed parallel beta-helix repeat-containing protein	A0A286S1P0	Klebsiella_phage	6.5e-39	68.4
WP_167803384.1\|1430100_1431510_+	hypothetical protein	A0A1D8KTD3	Synechococcus_phage	3.5e-17	25.2
WP_142674216.1\|1431848_1432958_+	acyltransferase family protein	C6ZR20	Salmonella_phage	4.7e-09	25.5
WP_065807526.1\|1433046_1433286_-	DinI family protein	K7P6H1	Enterobacteria_phage	6.1e-31	85.7
WP_101979943.1\|1433359_1433686_+	hypothetical protein	K7PGV5	Enterobacterial_phage	5.2e-25	51.9
WP_004149224.1\|1433901_1434831_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	6.7e-134	81.4
1433788:1433813	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1662052 : 1668958

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004180551.1\|1662052_1662916_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_004180550.1\|1662926_1663700_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004151134.1\|1663940_1664837_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004144192.1\|1665079_1666441_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004175198.1\|1666760_1667483_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_019705218.1\|1667479_1668958_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

2652996 : 2663883

Escherichia_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040182019.1\|2652996_2656104_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
WP_004176258.1\|2656158_2657424_+	MFS transporter	NA	NA	NA	NA
WP_001620097.1\|2657454_2658543_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004176262.1\|2658629_2658890_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620095.1\|2659187_2660048_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_002210513.1\|2660068_2660830_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_002903955.1\|2661091_2661994_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_002210516.1\|2663262_2663883_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_4

3312882 : 3322356

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004224003.1\|3312882_3314604_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_023302126.1\|3314648_3315350_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3315703_3315922_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3316052_3318332_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3318362_3318680_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3319005_3319227_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_032429904.1\|3319303_3321244_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.9e-38	41.4
WP_002896440.1\|3321240_3322356_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_5

4810124 : 4835718

Salmonella_phage(60.0%)

transposase,integrase

attL 4797675:4797689|attR 4845641:4845655

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4797675:4797689	attL	NA	NA	NA	NA
WP_167803450.1\|4810124_4811093_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.7e-178	95.7
WP_004146626.1\|4811262_4811427_-	hypothetical protein	NA	NA	NA	NA
WP_023284468.1\|4811688_4813269_+	lytic transglycosylase F	K7RVN3	Vibrio_phage	6.3e-07	31.7
WP_167803451.1\|4815333_4817934_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_167803452.1\|4818016_4819116_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.9e-48	42.4
WP_044652526.1\|4819240_4819486_-	hypothetical protein	NA	NA	NA	NA
WP_046877729.1\|4820135_4821500_-	dGTPase	NA	NA	NA	NA
WP_024189874.1\|4821924_4822593_+	DNA adenine methylase	A0A0M4S5U3	Salmonella_phage	1.4e-40	41.9
WP_044650562.1\|4822589_4823435_+	8-oxoguanine DNA glycosylase	NA	NA	NA	NA
WP_001514829.1\|4823378_4824062_-	hypothetical protein	NA	NA	NA	NA
WP_046877730.1\|4824030_4824636_-	7-cyano-7-deazaguanine synthase	NA	NA	NA	NA
WP_044650498.1\|4824632_4825844_-	nucleoside 2-deoxyribosyltransferase	NA	NA	NA	NA
WP_044650496.1\|4825870_4826203_-	hypothetical protein	NA	NA	NA	NA
WP_167803453.1\|4826857_4829260_-	AAA family ATPase	NA	NA	NA	NA
WP_046877732.1\|4829446_4829851_-	hypothetical protein	NA	NA	NA	NA
WP_167803454.1\|4829843_4831868_-\|integrase	integrase	NA	NA	NA	NA
WP_053065658.1\|4831867_4833412_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_167803450.1\|4833726_4834695_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.7e-178	95.7
WP_167803455.1\|4834716_4835718_-\|integrase	site-specific integrase	NA	NA	NA	NA
4845641:4845655	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050823

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP050822

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection