CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP050828	Klebsiella pneumoniae strain Bckp212 plasmid pBckp212-2, complete sequence	0 crisprs	NA	0
NZ_CP050827	Klebsiella pneumoniae strain Bckp212 plasmid pBckp212-1, complete sequence	0 crisprs	WYL	2
NZ_CP050826	Klebsiella pneumoniae strain Bckp212 chromosome, complete genome	2 crisprs	csa3,cas3,DEDDh,DinG,WYL,RT	8

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 80224

Stx2-converting_phage(20.83%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101979470.1\|0_1539_+\|transposase	IS66-like element ISKpn24 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.3e-280	94.3
WP_023287225.1\|1590_2529_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023287224.1\|2561_3476_-	alpha/beta hydrolase	A0A1D8EVD1	Mycobacterium_phage	9.0e-06	28.0
WP_023287223.1\|3486_4356_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_023287222.1\|4372_4996_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_167813114.1\|4982_6419_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_023288221.1\|6548_7781_-	MFS transporter	NA	NA	NA	NA
WP_100112216.1\|8290_9259_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	9.1e-182	97.5
WP_017146595.1\|10536_10890_-	hypothetical protein	NA	NA	NA	NA
WP_024193481.1\|10882_11083_-	hypothetical protein	NA	NA	NA	NA
WP_167813116.1\|13131_14100_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	3.9e-185	99.1
WP_167813119.1\|14305_14608_-	hypothetical protein	A0A222YY57	Escherichia_phage	3.4e-10	62.5
WP_011251286.1\|14677_15097_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011251285.1\|15093_15405_-	hypothetical protein	NA	NA	NA	NA
WP_023288266.1\|16160_16499_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	2.3e-47	81.0
WP_032430752.1\|16495_16843_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	7.7e-59	95.7
WP_032430751.1\|16891_18430_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.5e-276	92.6
WP_048293850.1\|19194_20175_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	3.4e-184	98.5
WP_101979500.1\|20373_21741_-	formimidoylglutamate deiminase	NA	NA	NA	NA
WP_017900871.1\|21843_22605_+	histidine utilization repressor	NA	NA	NA	NA
WP_017900872.1\|22601_23159_+	HutD family protein	NA	NA	NA	NA
WP_032430756.1\|23192_24725_-	aromatic amino acid lyase	A0A1V0S940	Catovirus	9.0e-67	35.2
WP_017900874.1\|24735_25611_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014228066.1\|25641_26322_-	ABC transporter permease	NA	NA	NA	NA
WP_032430757.1\|26324_26969_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_167813121.1\|26965_28063_-	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	7.7e-12	37.9
WP_160421093.1\|29347_30256_+	urocanate hydratase	NA	NA	NA	NA
WP_101979007.1\|30309_31704_+	cytosine permease	NA	NA	NA	NA
WP_101979008.1\|31715_32924_+	imidazolonepropionase	NA	NA	NA	NA
WP_017900880.1\|32916_33726_+	N-formylglutamate deformylase	NA	NA	NA	NA
WP_101979009.1\|34466_34874_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	1.2e-13	39.4
WP_101979139.1\|35968_36757_-	hypothetical protein	NA	NA	NA	NA
WP_048291880.1\|36756_37221_-	hypothetical protein	NA	NA	NA	NA
WP_100112216.1\|37908_38877_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	9.1e-182	97.5
WP_071444207.1\|39830_40355_+	hypothetical protein	NA	NA	NA	NA
WP_101979506.1\|41274_42078_-	hypothetical protein	NA	NA	NA	NA
WP_101978909.1\|42201_43485_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_048298736.1\|44244_45681_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	7.2e-10	23.3
WP_023288270.1\|45779_46568_+	hypothetical protein	NA	NA	NA	NA
WP_167813112.1\|46960_47467_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_023279773.1\|49655_50624_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.9e-180	96.6
WP_080876680.1\|50719_53836_-	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	4.1e-26	24.1
WP_080876679.1\|53952_55194_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_080876678.1\|55190_56747_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	7.1e-104	43.6
WP_080876690.1\|56950_58816_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_077252861.1\|61652_61766_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.6e-10	81.1
WP_101979531.1\|61857_63456_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	7.3e-19	31.9
WP_025999313.1\|66762_67245_+	hypothetical protein	NA	NA	NA	NA
WP_004118061.1\|67520_67925_-	DUF2251 domain-containing protein	NA	NA	NA	NA
WP_127472195.1\|69073_70165_+	DNA-binding transcriptional repressor LacI	C6ZCU4	Enterobacteria_phage	7.3e-188	97.5
WP_167813123.1\|70272_73332_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	95.6
WP_143832796.1\|73383_74637_+	lactose permease	NA	NA	NA	NA
WP_001138082.1\|75405_78291_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.1e-190	39.9
WP_000904906.1\|78416_79031_+	recombinase family protein	E5FFF9	Burkholderia_phage	2.3e-37	48.6
WP_167813125.1\|79095_80224_+\|transposase	IS3-like element IS1133 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.7e-52	41.1

DBSCAN-SWA_2

92908 : 161488

Salmonella_phage(31.58%)

integrase,transposase

attL 101773:101802|attR 161516:161545

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004186933.1\|92908_94045_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004026552.1\|94110_94428_-	hypothetical protein	NA	NA	NA	NA
WP_167813127.1\|94579_94903_-	hypothetical protein	NA	NA	NA	NA
WP_004181760.1\|94899_95658_-	hypothetical protein	NA	NA	NA	NA
WP_014386528.1\|95654_96614_-	hypothetical protein	NA	NA	NA	NA
WP_004186937.1\|96656_97064_-	hypothetical protein	NA	NA	NA	NA
WP_004181762.1\|97073_97538_-	hypothetical protein	NA	NA	NA	NA
WP_004181763.1\|97585_97828_-	hypothetical protein	NA	NA	NA	NA
WP_045372268.1\|99381_100458_+\|transposase	IS110 family transposase	NA	NA	NA	NA
101773:101802	attL	NA	NA	NA	NA
WP_004118235.1\|102260_102782_+	RNA polymerase sigma factor FecI	NA	NA	NA	NA
WP_017146590.1\|102778_103732_+	fec operon regulator FecR	NA	NA	NA	NA
WP_023287171.1\|103818_106143_+	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_023287170.1\|106187_107090_+	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_023287169.1\|107086_108085_+	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_004118246.1\|108081_109038_+	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA
WP_004152282.1\|109038_109806_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_023287168.1\|109904_110198_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	8.0e-49	95.9
WP_023287167.1\|110528_110807_-	EAL domain-containing protein	NA	NA	NA	NA
WP_024241646.1\|111099_112182_+	DNA-binding transcriptional repressor LacI	C6ZCU4	Enterobacteria_phage	2.2e-189	98.3
WP_023287164.1\|112289_115364_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.5
WP_023287163.1\|115415_116669_+	lactose permease	NA	NA	NA	NA
WP_077263568.1\|116784_117753_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	3.8e-180	96.6
WP_113707494.1\|117732_118086_+	hypothetical protein	A0A2H4IBK3	Erwinia_phage	1.7e-24	51.0
WP_023287162.1\|118196_118733_+	hypothetical protein	G8C7Q8	Escherichia_phage	1.9e-27	42.5
WP_032414405.1\|118741_119200_+	hypothetical protein	G8C7Q9	Escherichia_phage	5.1e-42	55.0
WP_100112172.1\|119286_120255_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.9e-179	96.6
WP_032414401.1\|122329_122866_+	hypothetical protein	NA	NA	NA	NA
WP_017900946.1\|125172_126183_-	replication initiation protein	J9Q7H0	Salmonella_phage	1.1e-86	53.5
WP_023287153.1\|126912_128079_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.5e-223	97.2
WP_023287152.1\|128078_129050_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	1.0e-148	86.6
WP_023287178.1\|136546_136969_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-30	48.6
WP_101977301.1\|137154_138141_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_048292268.1\|139124_140348_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_012541817.1\|140440_140959_-	hypothetical protein	NA	NA	NA	NA
WP_012541818.1\|140971_141826_-	WYL domain-containing protein	NA	NA	NA	NA
WP_023287181.1\|141962_143144_+	hypothetical protein	NA	NA	NA	NA
WP_023287182.1\|143140_145369_+	hypothetical protein	NA	NA	NA	NA
WP_023287184.1\|146664_147108_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_004144067.1\|147104_147575_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_000654811.1\|147661_148630_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.7e-172	91.6
WP_085956500.1\|149270_150639_+\|transposase	IS3-like element ISKpn8 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	7.2e-108	95.5
WP_167813129.1\|150908_151877_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.8e-175	94.1
WP_017901247.1\|152215_153427_-	M24 family metallopeptidase	NA	NA	NA	NA
WP_020481021.1\|153513_154467_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.7e-10	24.0
WP_101984551.1\|154623_155472_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_017901245.1\|155495_156167_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_017901244.1\|156163_156826_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_017901243.1\|156830_157649_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.8e-29	38.3
WP_017901242.1\|157645_158611_+	DMT family transporter	NA	NA	NA	NA
WP_167813130.1\|160519_161488_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	4.2e-179	96.0
161516:161545	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP050826

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050826_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050826_1

1658579-1658734

Orphan

Consensus_repeat	Method
GTAGGCCTGATAAGCGCAGCGCCATCAGGCAGTGTGGCAGCTACGCCTGACCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050826_1

>merge|NZ_CP050826|1|1658579-1658734|CRISPRCasFinder
GTAGGCCTGATAAGCGCAGCGCCATCAGGCAGTGTGGCAGCTACGCCTGACCCGGCCTGGATTGTACGGTGGGAGTCATCCCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCAGTGTGGCAGCTACGCCTGACCCGG

>NZ_CP050826|1|1|1658579-1658734|CRISPRCasFinder
GTAGGCCTGATAAGCGCAGCGCCATCAGGCAGTGTGGCAGCTACGCCTGACCCGG	CCTGGATTGTACGGTGGGAGTCATCCCCCGATTAGTTCGCCATCCC
GTAGGCCTGATAAGCGAAGCGCCATCAGGCAGTGTGGCAGCTACGCCTGACCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050826.1\|WP_004146563.1\|1649556_1649697_-\|small-membrane-protein	unknown	unknown	unknown
NZ_CP050826.1\|WP_065518756.1\|1671005_1671917_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137
NZ_CP050826.1\|WP_167812939.1\|1669547_1670975_+\|undecaprenyl-phosphate-galactose-phosphotransferase-WbaP	unknown	unknown	gnl\|CDD\|185126
NZ_CP050826.1\|WP_009483956.1\|1648829_1649441_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|197715
NZ_CP050826.1\|WP_065518752.1\|1665676_1666816_+\|polysaccharide-export-protein	unknown	unknown	gnl\|CDD\|237903
NZ_CP050826.1\|WP_015875032.1\|1652795_1654148_-\|molecular-chaperone	unknown	unknown	gnl\|CDD\|236954
NZ_CP050826.1\|WP_065518750.1\|1656592_1658440_+\|outer-membrane-assembly-protein-AsmA	unknown	unknown	gnl\|CDD\|236772
NZ_CP050826.1\|WP_020324300.1\|1662508_1663138_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|214471
NZ_CP050826.1\|WP_004198790.1\|1649934_1650636_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP050826.1\|WP_074418832.1\|1666815_1667250_+\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|182256
NZ_CP050826.1\|WP_049256767.1\|1661225_1662116_+\|GalU-regulator-GalF	unknown	unknown	gnl\|CDD\|182252
NZ_CP050826.1\|WP_014343316.1\|1664097_1665531_+\|capsule-assembly-Wzi-family-protein	unknown	unknown	gnl\|CDD\|379441
NZ_CP050826.1\|WP_004213673.1\|1654285_1655134_+\|DNA-3-methyladenine-glycosylase-2	unknown	unknown	gnl\|CDD\|236671
NZ_CP050826.1\|WP_002912442.1\|1655248_1655890_+\|uridine-kinase	unknown	unknown	gnl\|CDD\|235492
NZ_CP050826.1\|WP_023317078.1\|1650650_1652507_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP050826.1\|WP_065518754.1\|1667269_1669432_+\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|183173
NZ_CP050826.1\|WP_001741958.1\|1663684_1663807_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050826.1\|WP_004151147.1\|1658877_1660461_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP050826.1\|WP_004151145.1\|1655980_1656562_+\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|274062
NZ_CP050826.1\|WP_004151139.1\|1647280_1648555_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|224220

Protein	Function_ID	Function_description	E-value
NZ_CP050826.1\|WP_167812939.1\|1669547_1670975_+\|undecaprenyl-phosphate-galactose-phosphotransferase-WbaP	gnl\|CDD\|185126	PRK15204, PRK15204, undecaprenyl-phosphate galactose phosphotransferase; Provisional.	0
NZ_CP050826.1\|WP_009483956.1\|1648829_1649441_-\|response-regulator-transcription-factor	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	0.00203687
NZ_CP050826.1\|WP_065518752.1\|1665676_1666816_+\|polysaccharide-export-protein	gnl\|CDD\|237903	PRK15078, PRK15078, polysaccharide export protein Wza; Provisional.	0
NZ_CP050826.1\|WP_015875032.1\|1652795_1654148_-\|molecular-chaperone	gnl\|CDD\|236954	PRK11678, PRK11678, putative chaperone; Provisional.	0
NZ_CP050826.1\|WP_065518750.1\|1656592_1658440_+\|outer-membrane-assembly-protein-AsmA	gnl\|CDD\|236772	PRK10833, PRK10833, putative assembly protein; Provisional.	0
NZ_CP050826.1\|WP_020324300.1\|1662508_1663138_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|214471	smart00014, acidPPc, Acid phosphatase homologues.	2.01033e-16
NZ_CP050826.1\|WP_004198790.1\|1649934_1650636_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	8.47096e-37
NZ_CP050826.1\|WP_074418832.1\|1666815_1667250_+\|protein-tyrosine-phosphatase	gnl\|CDD\|182256	PRK10126, PRK10126, low molecular weight protein-tyrosine-phosphatase Wzb.	1.10288e-65
NZ_CP050826.1\|WP_049256767.1\|1661225_1662116_+\|GalU-regulator-GalF	gnl\|CDD\|182252	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF.	0
NZ_CP050826.1\|WP_014343316.1\|1664097_1665531_+\|capsule-assembly-Wzi-family-protein	gnl\|CDD\|379441	pfam14052, Caps_assemb_Wzi, Capsule assembly protein Wzi. Many bacteria are covered in a layer of surface-associated polysaccharide called the capsule. These capsules can be divided into four groups depending upon the organisation of genes responsible for capsule assembly, the assembly pathway and regulation. This family plays a role in group 1 capsule biosynthesis. It is likely to be involved in the later stages of capsule assembly. It is likely to consist of a beta-barrel structure.	1.61024e-135
NZ_CP050826.1\|WP_004213673.1\|1654285_1655134_+\|DNA-3-methyladenine-glycosylase-2	gnl\|CDD\|236671	PRK10308, PRK10308, 3-methyl-adenine DNA glycosylase II; Provisional.	1.79995e-180
NZ_CP050826.1\|WP_002912442.1\|1655248_1655890_+\|uridine-kinase	gnl\|CDD\|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	1.7406e-147
NZ_CP050826.1\|WP_023317078.1\|1650650_1652507_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.20803e-41
NZ_CP050826.1\|WP_065518754.1\|1667269_1669432_+\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|183173	PRK11519, PRK11519, tyrosine-protein kinase Wzc.	0
NZ_CP050826.1\|WP_065518756.1\|1671005_1671917_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	5.74544e-16
NZ_CP050826.1\|WP_004151147.1\|1658877_1660461_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	9.01248e-99
NZ_CP050826.1\|WP_004151145.1\|1655980_1656562_+\|dCTP-deaminase	gnl\|CDD\|274062	TIGR02274, Probable_deoxycytidine_triphosphate_deaminase, deoxycytidine triphosphate deaminase. Members of this family include the Escherichia coli monofunctional deoxycytidine triphosphate deaminase (dCTP deaminase) and a Methanocaldococcus jannaschii bifunctional dCTP deaminase (3.5.4.13)/dUTP diphosphatase (EC 3.6.1.23), which has the EC number 3.5.4.30 for the overall operation. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	1.60713e-93
NZ_CP050826.1\|WP_004151139.1\|1647280_1648555_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|224220	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion].	4.74771e-108

>NZ_CP050826.1|WP_065518750.1|1656592_1658440_+|outer-membrane-assembly-protein-AsmA
MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQLSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAVRDSSAPVVPHDNTLPLAPEDRGWSYDVRQLQVADSVLFFQHENGEQVTVRDIRLQMEQDENHRATVDFSGRMNRDQRDLALNFSATVQGGDYPHSLKADFTQLSWQLRGAELPPDGINGQGSLQASWQEDDKTLRFDNLNLMANRSTVTGSGSVVLGDRPDWSLDLHATTLDLDSLLAQRSPATDSSASQQGQSQTRPLRPVIADSDEREDYQSLRGFNGRMALSADQLQWRGLNFTQVQSEISNQQGLLTVSKMQGNLDGGQLSLPGTLDARGDTPLATFQPALQNVEIGSLIKAFNYSLNLTGKLSLSGEFSGTRIDADDFRRHWQGQAQLQMADTRTEGLNFQQLVQQAVERSTNVRAQENYDNATRLDSVSSRLTLDNGLVTLNRLQGQSDVMAMTGEGQLDLQKENCDMRFNVRVLGGWKGEGKLIDRLKQTAIPLRIYGEWQSLSYSLQVDQILRKQLQDEAKQRLNDWVERNKGSKDGNDAKKLLDKL
>NZ_CP050826.1|WP_004151145.1|1655980_1656562_+|dCTP-deaminase
MRLCDRDIEAWLDEGRLAINPRPPVERINGATVDVRLGNKFRTFRGHTAPFIDLSGPKAEVSAALDRVMSEEIVLPEGEAFFLHPGELALAVTYESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMPIGALSFEPLSGPAARPYNRREDAKYRDQQGAVASRIDKD
>NZ_CP050826.1|WP_002912442.1|1655248_1655890_+|uridine-kinase
MTDMSHQCVIVGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEERVKTNYDHPSSMDHSLLFQHLQMLKSGQPIELPVYSYVEHTRTPNTIHVEPKKVIILEGILLLTDARLRNELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
>NZ_CP050826.1|WP_004213673.1|1654285_1655134_+|DNA-3-methyladenine-glycosylase-2
MVLLPWTPPYDWAWMVGFLQARAVAGVERFHDGGYSRSFGVEGHRGLIHLAPDEEAQGLRVTLSPGLQPVAEICYARIGQLFDLACDPRQVARTLGDLAQARPGLRLPGALDAFEQAVRAVLGQLVSVAMAARLTAKVAAGWGEPLAEAPGYVLFPTPEALSRADPQALKALGMPLRRAEALIHLARAALSGELPLTAPADIDAGLRQLQTLPGIGRWTANYFALRGWQAKDIFLPDDYLIKQRFPGMTPAAIARYARRWQPMRSYALLHIWYTDDWAPAAE
>NZ_CP050826.1|WP_015875032.1|1652795_1654148_-|molecular-chaperone
MFIGFDYGTANCSVAVMRENTPQLLTLENGSALLPSMLCAPTREAVSEWLYRHHDVPTHSDENQALLRRAIAANRDEDIEVLRNSVQFGLASLQQYVEDPEEVYFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIKLQAESQLPEQIDQAVIGRPINFQGLGGDEANAQAQGILERAAHRAGFRDVVFQFEPVAAGLDFEATLSEEKRVLVVDIGGGTTDCSLLLMGPQWRERADRQQSLLGHSGCRIGGNDLDIALAFKCLMPLLGMGGETEKGTALPILPWWNAVAINDVPAQSDFYSTANGRLLNDLLRSARDADKVALLLKVWRQRLSYRLVRSAEESKIALSSAASVETALPFIQDDLATAIAQQGLEAALDQPLTRIMEQVQLALDSSQTTPDVIYLTGGSARSPLIKKALAAQLPGIPLAGGDDFGSVTAGLARWAQVVFR
>NZ_CP050826.1|WP_023317078.1|1650650_1652507_-|sensor-histidine-kinase
MLLVAPQAQAATRQVGIDIPVQWYADDSGQMTLDRFAALPADQLATTRQIPSFGYSRKTWWLRSELPGTWFAGEPRWLQLGPTFVDHLTIYYRPLGSDGPWTQRIFGDRDGARGSDLHYRERVLILPPPPTAAGYELVFRLQSTSTLILLASLSSAQAFVQRATADTAFWSFYFGLAAVASGVALWLALALRRRLLWGICLFSLNYPLVAALHGFPEWFFGHAALPFQDFMISSLSLFSYATALWLHSEIFDLKKNMPRLHQLLIAAVILNLVLQVSIPLGFYGFAMQIEGVVFIIITPVLLFTSWWLWRKKAIDRTTLLLGLLPPFYVVAAVLVQLSIHGIIPFHMAIYSLWQYALIVHIITVLIIAILRVRAENRQLEQKQRLARELQIEREASFHQRQFMGMVAHEFRTPLAVIQAALENLRLSAASTSQEARFDRIGRAATRLVQLTDNCLADARLASHDLHVERQQTALLTVINMAASVVAISHDHYLNIRQHGAVESPQLQADAGLLCIAIANLLDNAVKYSPPGEIAIDIHSDAGQTELRIRDHGPGLPAGQAELIFERYRRGEHTSPVPGGTGLGLYVARQIVQAHDGKLWLAEHGPDGCTFILTLPTVA
>NZ_CP050826.1|WP_004198790.1|1649934_1650636_-|response-regulator-transcription-factor
MALRLAIIEDNADLLDELLAWLGYRGFEVWGTRSAEAFWRQLHSHPVDIVLVDIGLPGEDGFSVLNYLHELGHYGLVVVSARGQQQDKLQALSLGADAYLIKPVNFAHLAETLTALGARLRQDRPAAPPAEAIGTPPAVSPGSWRLHEDKLISPDARTLELTQQEYRLVELLMRNRNEVCSKLDLHACLFSHESEPDLHRIDVVVSRLRHKARQQGIHLPVRAIFGKGLAFIS
>NZ_CP050826.1|WP_004146563.1|1649556_1649697_-|small-membrane-protein
MAMQTWLVLLLCIFFFSISVYSFISYLKDRRRQKFTFNDKRSMRRK
>NZ_CP050826.1|WP_009483956.1|1648829_1649441_-|response-regulator-transcription-factor
MRNINVTINTRNAFVRESLVAMVNDLTRGDLRARFSWRNTDLSAEDIIICEVIPGEIYLCNTLIKNRKRGSSLIILHSYDQLPEDEFMINCLKGVIFVSLKTASIPQLLTIIKSELQHCMTPTATDAAGRELSCASCPHRVLSRSQTAVVHGILEGLDMSKIAALQRVSPRTAAYHKNKIMEKYSLNNNHEFFQFMNLLRERW
>NZ_CP050826.1|WP_004151139.1|1647280_1648555_+|dicarboxylate/amino-acid:cation-symporter
MANANKLTLFIVVFMLMGILSGAAIHAYATPTTVSAWADNITLLTDLFLRLIKMVIAPLVFSTLTVGIMRLGETATIGRVGGKAMVWFITSSVLSILVGLVIVTFQHPGAGLNLAVPKEAVDTGLAVSGMSLKGFLSHTIPTSITEAMANNEILQIVVFSMFFGIAGASLGEKFNAPLVAALNVVSHIMLKVTGYVMYVAPLAIFAAISSVIASQGLGILLNYASFIGGYYLAVLLTSAVLIAVGYMVLKKEVFRLLNMLKDPVLVAFTTSSSEAAYPKTLERLVKFGCSRNIVSFVLPIGYSFNLVGSMVYCSFAAMFIAQAYNVPLSFSEITVMMLTLMLASKGIAGVPRSALVVLAATIPSFNIPVAGILLLMGIDHFLDMGRSAINVLGNGIATAMLSKNEGLLTDEEAQPDWEVEKAEA
>NZ_CP050826.1|WP_004151147.1|1658877_1660461_-|TerC-family-protein
MEWIADPSIWAGLVTLVVIELVLGIDNLVFIAILAEKLPPAQRDRARITGLMLAMVMRLLLLASISWLVTLTKPLIVFHDFSFSARDLIMLFGGLFLLFKATVELNERLEGKDSDNPTQRKGAKFWAVVAQIVVLDAIFSLDSVITAVGMVDHLAVMMAAVVIAISLMLMASKALTRFVNSHPTIVILCLSFLLMIGFSLIAEGFSFIIPKGYLYAAIGFSVMIEALNQLAQFNRRRFLSANMTLRQRTTEAVMNLLSGQKEKAELDADTASLVADQDQHPLFNPQERLMIERVLNLNQRSVSSIMTSRHDIERINLSAPEEEIRSLVEKNQHTRLVVTGGKDNEDLLGVVHVIDLLQQSLRQEPLDLQALVRQPLVFPEGLPLLSALEQFRQARTHFAFVVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQHHQDGSWTVNGHMPLEDLVQYVPLPLDDKREYHTVAGLLMEYLQHVPQVGETIEIDGYTLRTLQVDSHRVQKVQIVPPVKQDELDYEV
>NZ_CP050826.1|WP_049256767.1|1661225_1662116_+|GalU-regulator-GalF
MANLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEIVLVTHSSKNAVENHFDTSYELEALLEQRVKRQLLAEVQAICPPGVTIMNVRQAQPLGLGHSILCARPVVGDNPFVVVLPDIILDGGTADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPMVAEGQVARIVEFIEKPDEPQTLDSDLMAVGRYVLSADIWAELERTEPGAWGRIQLTDAIAELAKKQSVDAMLMTGESYDCGKKMGYMQAFVTYGMRNLKEGTKFRESIKKLLA
>NZ_CP050826.1|WP_020324300.1|1662508_1663138_+|phosphatase-PAP2-family-protein
MNWQLISFFGDSTVLLPSAAALFIVLMLRKTSRLLAWQWSLLFGITGAIVCASKLAFMGWGLGIRELDYTGFSGHSALSAAFWPIFLWLLSARFSVGLRKAAVITGYVLAAVVGYSRLVIHAHSVSEVIAGLLLGAAGSALFLVLQKRTSDPESVNISWGGVACLVMVPLILLHSGSKAPTQSLLGQIATAVGPLDKPFTRTDLHKQAW
>NZ_CP050826.1|WP_001741958.1|1663684_1663807_-|hypothetical-protein
MMIILTGSIFTAVEENLCATASGFSDATAPGLTATSALTT
>NZ_CP050826.1|WP_014343316.1|1664097_1665531_+|capsule-assembly-Wzi-family-protein
MIKIARIAVTLGLLSSLGAQAYAAGLVVNDNDLRNDLAWLSDRGVIHLSLSTWPLSQEEIARALKKAKPSYSSEQVVLARINQRLSALKADFRVTGYTSTDQPGTPQGFGQTQPADNSLGLAFNNSGEWWDVHLQGNVEGGERISNGSRFNANGAYGAVKFWNQWLSFGQVPQWWGPGYEGSLIRGDAMRPMTGFLMQRAEQAAPETWWLRWVGPWQYQISASQMNQYTAVPHAKIIGGRFTFSPFQSLELGASRIMQWGGEGRPESFSSFWDGFTGHDNTGTDNEPGNQLAGFDFKFKLEPTLGWPVSFYGQMVGEDESGYLPSANMFLGGVEGHHGWGKDAVNWYVEAHDTRTNMSRTNYSYTHHIYKDGYYQQGYPLGDAMGGDGQLIAGKVELITEDNQRWSTRLVYAKVNPENQSINKAFPHADTLKGVQLGWSGDVYQSVRLNTSLWYTNANNSDSDDVGASAGIEIPFSL
>NZ_CP050826.1|WP_065518752.1|1665676_1666816_+|polysaccharide-export-protein
MKKKLVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLIDQLRPETVLARPNPQLDNLLRSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNSDGTIFYPYIGKVRVAGKTLSQVREEIASRLTTYIESPQVDVSIAAFRSQKVYVTGEVTTSGKQAITNIPLTVMDAINAAGGLSADADWRNVVLTHNGKDTKISLYALMQKGDLTQNHLLYPGDILFVPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGISQSLSDATGIFVIRQLKGDKESKIANIYQLNAQDASAMVLGTDFHLEPYDIVYVTTAPLVRWNRVINQLVPTITGVHDMTETVRYIKRWPN
>NZ_CP050826.1|WP_074418832.1|1666815_1667250_+|protein-tyrosine-phosphatase
MFDSILVVCTGNICRSPIGERFLRRALPNKKIDSAGTGALVGYDADGSAIKIAAQNGLSLEDHKGQQFTSSLARQYDLILVMEKSHIEQICRIAPEVRGKTMLFGQWLGHRDIPDPYRKSEEAFASVYQLIEQAGLLWVEKLGS
>NZ_CP050826.1|WP_065518754.1|1667269_1669432_+|polysaccharide-biosynthesis-tyrosine-autokinase
MSPVTNKSVAKDADEIDLGRIVGELIDHRKLIISVTALFTLIALIYALFATPIYQADALIQVEQKQGNAILSNLSQMLPDSQPSSAPEITLLQSRMILGKTVSDLNLQARVVQNYFPVFGKGWARLRGIKPGVIYISRLYMPENDNETSELELIVKDKQHYIIKYNDKQLEGKVGELLEGKDLSLKVASMEAEPGMEFTVSYISKLKAITDLQKVFTVADEGKDTGMLSLSLTGDNADLIVKIVDSISNNYLAQNIARQAAQDAKSLDFLNLQLPKVRADLDIAEDKLNQYRRQKDSVDLSLEAKSVLEQIVNVDNQLNELTFRESEISQLYTKEHPTYKALMEKRKTLQDEKTKLNERVSAMPKTQQDILRLSRDVDSGQAVYMQLLNRQQELNIAKSSAIGNVRIIDNAVAQPNPVKPKKIIVLLVGIVLGIIASIGLVLVRVFLRRGIESPEQLEELGINVYASIPVSETFAKKMVQVPSWRKKAQSELQGFLAIENPADLAIEAIRGLRTSLHFAMMEARNNVLMISGASPNAGKTFVSTNLAAVIAQTGKKVLLVDTDMRKGYTHKLFSASNENGLSDFLSGKVELSKTVKNVSQVGFDFISRGIAPPNPAELLMHRRFGELITWASQNYDIVILDTPPILAVTDAAIIGHYTGTTLLIARFEQNTAKELEVSVKRFEQSGVIVKGCILNGVVKKASSYYGYGYSHYGYTYTDDK
>NZ_CP050826.1|WP_167812939.1|1669547_1670975_+|undecaprenyl-phosphate-galactose-phosphotransferase-WbaP
MALLGRNVLVSVALALSDFISFTSSTYLAMGVLSVFSRNYDSIIPESQIDGWVVLHLLLAFCCVAWYSMRLRHYFYRKTFWFELKEILRTLVIFAIIEIAVMAFTTWSFSRYLWVLTWIFVLFLVPVCRMITKRILHAFHLWQRDTWIIGSGTNAIEAYKAINSERNLGLIIVGFIHSDDGRPAGEQIEGLPVLNNDLNWLTTKDKRTQFIVAVESHQSEIRNTWLRNFMIKGYRYVSVIPTLRGMPLDSTDMSFIFSHEVMIFRVQQNLAKWSSRILKRLFDIFGSLAIIIVLSPALFYISLKVKKDGGPAIYGHERIGKGGRPFKCLKFRSMVINSKEVLAELLENDPAAKAEWDATFKLKNDPRVTKIGAFLRRTSLDELPQLFNVLKGEMSLVGPRPIITAELERYNEEVDYYLLSKPGMTGLWQVSGRSDVDYETRVYLDAWYVKNWSMWNDIAILFKTVGVVLKKDGAY
>NZ_CP050826.1|WP_065518756.1|1671005_1671917_+|glycosyltransferase-family-2-protein
MRYYIAIPTYNGGEIWKAAVDNIKKYAPADLFVHIIDSTSKDDTVLVAERAGFDVVTIEGSDFNHGGTRNKAVEEYIDRYDVVIFLTQDAIPQPNFIEKIISVFADHRIACAYGRQLPHTNANPLARHARSFSYPEKGYICGIENVSEMGLKTVFMSNSFSAYRLSIFKELGGFPSNTILCEDMFFTAKVVLAGYKVAYVAEAAVQHSHNYTPLEEFKRYFDIGVFHKNEPWIRQHMGGAGGEGKKFIISEIIFLLKNAPFWLPVACVNNFMKIVGYKLGQQYEKIPKKMIKSFSMHKRYWDV

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Crispr_ID: NZ_CP050826_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050826_2

4128418-4128550

Orphan

Consensus_repeat	Method
TGGCGGCTGGCGCCTTACCCGGCCTACAAAACCGAAGCAGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050826_2

>merge|NZ_CP050826|2|4128418-4128550|CRISPRCasFinder
TGGCGGCTGGCGCCTTACCCGGCCTACAAAACCGAAGCAGCAGCCCCGGCAAGCGCAGCGCCGCCGGGCACGGAGCCGCTTTATGCCGGCTGGCGGCTGGCGCCTTACCCGGCCTACAAAACTGAAGCAGCAG

>NZ_CP050826|2|2|4128418-4128550|CRISPRCasFinder
TGGCGGCTGGCGCCTTACCCGGCCTACAAAACCGAAGCAGCAG	CCCCGGCAAGCGCAGCGCCGCCGGGCACGGAGCCGCTTTATGCCGGC
TGGCGGCTGGCGCCTTACCCGGCCTACAAAACTGAAGCAGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050826.1\|WP_002889716.1\|4130634_4131273_-\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D	unknown	unknown	gnl\|CDD\|236457
NZ_CP050826.1\|WP_002889696.1\|4135760_4136528_-\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525
NZ_CP050826.1\|WP_032420366.1\|4121221_4121434_+\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|369322
NZ_CP050826.1\|WP_004177336.1\|4131265_4132060_-\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	unknown	unknown	gnl\|CDD\|235423
NZ_CP050826.1\|WP_004145825.1\|4136602_4137184_-\|D-sedoheptulose-7-phosphate-isomerase	unknown	unknown	gnl\|CDD\|179012
NZ_CP050826.1\|WP_002889742.1\|4122258_4123503_-\|esterase-FrsA	unknown	unknown	gnl\|CDD\|235337
NZ_CP050826.1\|WP_040215270.1\|4135049_4135790_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP050826.1\|WP_002889726.1\|4126279_4127335_-\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP050826.1\|WP_002889733.1\|4123608_4124067_-\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
NZ_CP050826.1\|WP_004152033.1\|4124324_4125782_+\|cytosol-nonspecific-dipeptidase	unknown	unknown	gnl\|CDD\|184986
NZ_CP050826.1\|WP_002889720.1\|4128795_4130019_-\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F	unknown	unknown	gnl\|CDD\|235481
NZ_CP050826.1\|WP_023325095.1\|4119817_4120615_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187602
NZ_CP050826.1\|WP_002889793.1\|4121802_4122201_-\|sigma-factor-binding-protein-Crl	unknown	unknown	gnl\|CDD\|182882
NZ_CP050826.1\|WP_004147186.1\|4132052_4133291_-\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B	unknown	unknown	gnl\|CDD\|235425
NZ_CP050826.1\|WP_040215263.1\|4120647_4121064_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP050826.1\|WP_040215265.1\|4125824_4126277_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182099
NZ_CP050826.1\|WP_002889722.1\|4128577_4128793_-\|(Na+)-NQR-maturation-NqrM	unknown	unknown	gnl\|CDD\|225538
NZ_CP050826.1\|WP_040215267.1\|4127494_4128355_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176522
NZ_CP050826.1\|WP_004177335.1\|4130031_4130628_-\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E	unknown	unknown	gnl\|CDD\|235074
NZ_CP050826.1\|WP_002889702.1\|4133294_4134638_-\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	unknown	unknown	gnl\|CDD\|235426

Protein	Function_ID	Function_description	E-value
NZ_CP050826.1\|WP_002889716.1\|4130634_4131273_-\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D	gnl\|CDD\|236457	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated.	1.0782e-142
NZ_CP050826.1\|WP_002889696.1\|4135760_4136528_-\|class-II-glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	1.08772e-144
NZ_CP050826.1\|WP_032420366.1\|4121221_4121434_+\|DUF1471-domain-containing-protein	gnl\|CDD\|369322	pfam07338, DUF1471, Protein of unknown function (DUF1471). This family consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some members of this family are annotated as ydgH precursors and contain two copies of this region, one at the N-terminus and the other at the C-terminus. The function of this family is unknown.	5.26043e-05
NZ_CP050826.1\|WP_004177336.1\|4131265_4132060_-\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	gnl\|CDD\|235423	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional.	1.37213e-153
NZ_CP050826.1\|WP_004145825.1\|4136602_4137184_-\|D-sedoheptulose-7-phosphate-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	2.35176e-148
NZ_CP050826.1\|WP_002889742.1\|4122258_4123503_-\|esterase-FrsA	gnl\|CDD\|235337	PRK05077, frsA, esterase FrsA.	0
NZ_CP050826.1\|WP_040215270.1\|4135049_4135790_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.3611e-109
NZ_CP050826.1\|WP_002889726.1\|4126279_4127335_-\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP050826.1\|WP_002889733.1\|4123608_4124067_-\|xanthine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	2.19173e-113
NZ_CP050826.1\|WP_004152033.1\|4124324_4125782_+\|cytosol-nonspecific-dipeptidase	gnl\|CDD\|184986	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional.	0
NZ_CP050826.1\|WP_002889720.1\|4128795_4130019_-\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F	gnl\|CDD\|235481	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional.	0
NZ_CP050826.1\|WP_023325095.1\|4119817_4120615_+\|SDR-family-oxidoreductase	gnl\|CDD\|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.29477e-50
NZ_CP050826.1\|WP_002889793.1\|4121802_4122201_-\|sigma-factor-binding-protein-Crl	gnl\|CDD\|182882	PRK10984, PRK10984, sigma factor-binding protein Crl.	2.69204e-83
NZ_CP050826.1\|WP_004147186.1\|4132052_4133291_-\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B	gnl\|CDD\|235425	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional.	0
NZ_CP050826.1\|WP_040215263.1\|4120647_4121064_+\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	6.09405e-45
NZ_CP050826.1\|WP_040215265.1\|4125824_4126277_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182099	PRK09831, PRK09831, GNAT family N-acetyltransferase.	1.29852e-85
NZ_CP050826.1\|WP_002889722.1\|4128577_4128793_-\|(Na+)-NQR-maturation-NqrM	gnl\|CDD\|225538	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown].	5.41902e-29
NZ_CP050826.1\|WP_040215267.1\|4127494_4128355_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176522	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.	3.68559e-130
NZ_CP050826.1\|WP_004177335.1\|4130031_4130628_-\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E	gnl\|CDD\|235074	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional.	4.25239e-127
NZ_CP050826.1\|WP_002889702.1\|4133294_4134638_-\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	gnl\|CDD\|235426	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional.	0

>NZ_CP050826.1|WP_040215267.1|4127494_4128355_+|glycerophosphodiester-phosphodiesterase
MKKILTALCLLATAGAWAAPQLIAHRGGTGDAPENTLPAIKLALENNAEAIWVTVQLSRDGVPVLYRSSDLSALTNSEGKVSSLTAAELAKVDAGWKWGGDSHPWRGKQATIPTLQSVLQQWPHTFFYIDIKSPDADPTVMGQRLLEVLKTTDSLDRVRVYSTEDRYIAALPPAIPRFVPRSETRTRLANISLSHQCQPASQRDGEQWYGLELKRKVEVVEKFTLGEGISPATLTWDKEAMDCFRSQDKAHIIFFGINSAEDYRTAKELGADGVMVDSPAQAKSWQ
>NZ_CP050826.1|WP_002889726.1|4126279_4127335_-|DNA-polymerase-IV
MRKIIHVDMDCFFAAVEMRDNPALRDIPLAIGGSRVQRGVISTANYPARKFGVRSAMPTATALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVSDSEHCHGSATLIAQEIRQTIERELRLTASAGVAPVKFLAKIASDMNKPNGQFVIAPHQVAEFVRALPLAKIPGVGKVSAAKLENMGLRTCGDVQNSDLAMLLKRFGKFGRILWERSHGIDEREIHNDRQRKSVGVERTLAEDIHEWPECEAIIENLYPELERRLAKVKPDLLIARQGIKLKFNDFQLTTQEHVWPRLNKEDLIATAHKAWDERRGGRGVRLVGLHVTLLDPQLERQLLLGI
>NZ_CP050826.1|WP_040215265.1|4125824_4126277_-|GNAT-family-N-acetyltransferase
MHIRAYRDSDLPLLCQIFLRAVRETASRDYTPGQIAAWAQVDETRWRQKLADSIGLVAVVNSQPVGFITAIGTHIDLLFVSPDRARQGIGGALIEALCAQYPAQVLTVDASITAKPCFTAHGFKVVAEQRVAARGEWFINYRMEKRVALR
>NZ_CP050826.1|WP_004152033.1|4124324_4125782_+|cytosol-nonspecific-dipeptidase
MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEHIMGWAKEKGLHAERDQVGNILIRKGATAGMENRKPVALQAHLDMVPQKNNDTVHDFVKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADDSVAHGPLEVLLTMTEEAGMDGAFGLQANWLQADILINTDSEEEGEIYMGCAGGIDFTSNLALTREAIPAGFQSFKVTLKGLKGGHSGGDIHLGLGNANKLLSRFLAGHADELDLRLVDFNGGTLRNAIPREAYATVAVAADKADALKALVNTYQALLKNELEAKEKNLVVLVEAVDNDKAALTQASRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDDNVQIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGQYWTLLTELLKAIPAK
>NZ_CP050826.1|WP_002889733.1|4123608_4124067_-|xanthine-phosphoribosyltransferase
MSEKYVVTWDMLQIHARKLASRLLPVEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPIAGR
>NZ_CP050826.1|WP_002889742.1|4122258_4123503_-|esterase-FrsA
MSQANLSETLFKPRFKHPETSTLVRRFSAGKPQAMQSALSGNHVDHWYRLINRLMWIWRGVTPQEILDVQARIVMSEAERTDPELFDTVIGYRGGNWIFEWAKEAMQWQQKAGQEADPLLSGRHWLHASNLYSIAAYPHIKGDELAEQAQALANRAYEEAAQRLPGSLRELEFTIPGGSPITGFLHMPKGEGPFPTVLMCGGLDSLQTDYYNLYENYFSPLGIAMLTIDMPSIGFSSKWTLNQDTSLLHQHALRHLENVPWIDHTRVAAFGFRFGANIAVRLGYLEPQRLKAVACLGPVVHGLLVDPLHQGRVPEMYLDVLASRLGMHDASDEALRVELNRYSLKTQGLLGRRCPTPMLSGFWKDDPFSPEEESRLITSSSADGKLLEIPFNPVYRNFDHALRQIARWINHRFG
>NZ_CP050826.1|WP_002889793.1|4121802_4122201_-|sigma-factor-binding-protein-Crl
MTLPSGHLKSKLIKKFTALGPYIREEQCHDNRFFFDCLAVCVNVKPAPEKREFWGWWMEMEAQESRFTYSYQFGLFNKEGSWQAVDIDDPEVSDRLEKTLREFHERAAALLTTFNLKLEPADDFSEPVRLRA
>NZ_CP050826.1|WP_032420366.1|4121221_4121434_+|DUF1471-domain-containing-protein
MKTVSTIFSAAALSLFAFTASAHSVTATSNTLDSAEAMIAKKAKELNATDYKITSAHMGNKVTMSAVLDK
>NZ_CP050826.1|WP_040215263.1|4120647_4121064_+|SRPBCC-family-protein
MATTTVSIEIPASVDQVWQLMGGFDSLPDWLPFIPKSMVSEGGRVRTLTTSDGGTVIERLEAFDNRQRSYSYSIIQAPFPVVDYLSTIAVVATADNNITRVEWSGSFTPVNVSDADAEALFSGIYRDGLQALKNNFSA
>NZ_CP050826.1|WP_023325095.1|4119817_4120615_+|SDR-family-oxidoreductase
MKLDLTHKVAVVSGSTSGIGLGIAKGLAWAGATVVIVGRQQRGVDTAIAAINAEHPDAQLRGVVADLSTEEGVSALLAAEPHADVVVNNLGIFNDKDFFSVPDSEWMHFYNVNVLSGVRLSRHYAQGMIDNGWGRIIFVSSESGVAIPADMINYGVTKSANLAVSHGLAKRLAGTGVTVNAILPGPTFTEGLQEMLAEAATQSGRSPREQADEFVKTARPSSIIQRAADVDEVANLAVYLASPLSSATTGAALRVDGGVVDTLAM
>NZ_CP050826.1|WP_002889722.1|4128577_4128793_-|(Na+)-NQR-maturation-NqrM
MLTVFIATFVIFALVILGMSLGYLVKRKSIQGSCGGISALGLEKVCDCPEPCDARKKRLAREAQRQQRRIL
>NZ_CP050826.1|WP_002889720.1|4128795_4130019_-|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F
MEIILGVVMFTLIVLVLSGLILAARSKLVNAGDVVIEINNEADKQIRTPAGDKLLNTLSSNGIFVSSACGGGGSCGQCRVTVKEGGGDILPTELSHITKRDAKAGCRLACQVAVKQNMKIELPEEIFGVKKWECEVISNDNKATFIKELKLRIPEGEVVPFRAGGYIQIECPPHKVAYADFDVPDEYRSDWDKFNLFRYVSEVKEPTLRAYSMANYPEEKGIIMLNVRIATPPPKVPDAPPGIMSSYIWSLKPGDKVTISGPFGEFFAKETDAEMVFIGGGAGMAPMRSHIFDQLKRLHSTRKISFWYGARSLREMFYDEEFEQLARDNPNFTFHVALSDPLPEDNWTGHTGFIHNVLYENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENILLDDFGG
>NZ_CP050826.1|WP_004177335.1|4130031_4130628_-|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E
MAHYISLFVRAVFVENMALAFFLGMCTFLAVSKKVSTAFGLGVAVTVVLGLAVPINNLVYNLVLRDGALVEGVDLSFLNFITFIGVIAALVQILEMILDKYFPALYNALGIFLPLIAVNCAIFGGVSFMVQRDYNFPESIVYGFGSGIGWMLAIVAMAGIREKMKYANVPAGLRGLGITFITTGLMALGFMSFSGVQL
>NZ_CP050826.1|WP_002889716.1|4130634_4131273_-|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D
MAEQSDMKEVKRVLVGPLIANNPIALQVLGVCSALAVTTKLETAFVMTIAVTLVTAFSSMFISMIRHHIPNSVRIIVQMAIIASLVIVVDQLLRAFAYETSKQLSVFVGLIITNCIVMGRAEAYAMKSPPLASFMDGIGNGLGYGAILIIVGFLRELIGSGKLFGITVLETVQNGGWYQPNGLFLLAPSAFFIIGLLIWALRSWKPEQQEKE
>NZ_CP050826.1|WP_004177336.1|4131265_4132060_-|Na(+)-translocating-NADH-quinone-reductase-subunit-C
MAEKKSNDSIGKTLLVVLVLCLVCSIVVAGSAVGLKSRQQAQRALDKQRNILAVSGLMHPGMDADAVADTFAARITPRLVNLATGELLEKDPGKFNQAQALKDPQQSMALDASQDPAGIKRRSNLAEIYLVRDAQQKIEQVVLPIYGNGLWSMMYAFVALDVDGRTVKGITYYDQGETPGLGGEVENPNWRQQFVGKQVLDDNGMPALKVVKGGARAGDLHAVDGLSGATLTSNGVQHSFDFWMGELGFGPFLKKVREGELNNG
>NZ_CP050826.1|WP_004147186.1|4132052_4133291_-|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B
MGLKHLIEKLEPHFTHGGKLEKYYPLYEAAATIFYTPGQVTRGAAHVRDAIDLKRMMILVWFAVFPAMFWGMYNVGLQTIPALHKLYGAEQLQQAIANNWHYSVAQWLGVSFSADAGWLSMMTLGAVFFLPIYITVFIVGGFWEVLFAIVRKHEINEGFFVTSILFALIVPPTLPLWQAALGISFGVVIAKEIFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWTAADGFSGATPLSQWASGGGEALVNVATGVPVSWMDAFLGNIPGSIGEVSTLMIFIGGAIILFGRVASWRIVAGVMIGMIATATLFNVIGSDTNPMFAMPWYWHLVLGGFAFGMMFMATDPVSASFTDKGKWSYGVLIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDYLVVQANIKRRKSRG
>NZ_CP050826.1|WP_002889702.1|4133294_4134638_-|Na(+)-translocating-NADH-quinone-reductase-subunit-A
MIKITKGLDLPIAGMPLQQISPAPAVKRVALLGEEYVGMRPAMAVKEGDRVKKGQILFEDKKIPGVCFTAPASGIVSAIHRGERRVLQSVVIDIEGNDAVAFTRYAADALAELPRDTVQQQLLASGQWTALRTRPFSKTPLPGSTPAAIFVNAMDTNPLAAEPQPIILAERAAFDAGLTVLTRLTDGKVHVCQPSGGKLGGHPLGQVCFNQFSGPHPAGLPGTHIHFLEPVSLNKQVWHLNYQDAIAIGKLFLDGELYCERIIALGGPQVTSPRLVKTTLGASLEDLLAGELQEGENRVISGSVLSGARAHGPHAFLGRFHLQVSVVKEGREKELFGWVMPGKEKFSITRTTLGHFFKRKRFHFSTDTNGGERAMVPIGNYERVMPLDILPTILLRDLLAGDTDSAQALGCLELDEEDLALCTYVCPGKYEYGPALRSVLTRIEQEG
>NZ_CP050826.1|WP_040215270.1|4135049_4135790_+|murein-L,D-transpeptidase
MRKIALFIAMLLLPCVSFAGLLSSNSPTTPVSKEYKQQLMGSPVYIEIFKEERMLDLYVKMGETYQLLDSYRICNYSGGLGPKQRQGDFKSPEGFYNVTRSQLKPDSRFYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSVGCYAMTDSGIDEIFQFVTGALVFGQPSVQVSIYPFRMTNANMERHKYSYYADFWKQLKPGYDYFQQTHKPPIVSVTDGRYVVSKPLSHEVVQPQLASNYTLPETK
>NZ_CP050826.1|WP_002889696.1|4135760_4136528_-|class-II-glutamine-amidotransferase
MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFQSPIAKLVQDYPIKSCSVVAHIRQANRGRVALENTHPFTRELWGRNWTYAHNGQLKGYKSLKTGNFHPVGETDSEKAFCWLLHRLTERYPRTPGNMLGVFKYIATLAGELREKGVFNMLLSDGRYVMAFCSTNLHWITRRAPFGVAKLLDQDVEIDFQRETTPNDVVTVIATQPLTANETWHKIMPGEWALFCLGERVV
>NZ_CP050826.1|WP_004145825.1|4136602_4137184_-|D-sedoheptulose-7-phosphate-isomerase
MYQDLIRNELNEAAETLANFLQDEANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFSRYVESVGRAGDVLLGISTSGNSGNVIKAIEAARAQGMKVITLTGKDGGKMAGSADVEIRVPHFGYADRIQEIHIKVIHILIMLIEKEMAKG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1631223 : 1638128

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004180551.1\|1631223_1632087_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_064178404.1\|1632097_1632871_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_167812933.1\|1633111_1634008_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	8.0e-15	29.8
WP_004144192.1\|1634250_1635612_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_143934515.1\|1635930_1636653_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	1.4e-30	33.2
WP_004149058.1\|1636649_1638128_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_2

1677874 : 1686248

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065518761.1\|1677874_1679281_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	7.3e-39	28.9
WP_004189145.1\|1679504_1680569_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.6e-105	55.0
WP_065518762.1\|1680595_1681465_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	66.7
WP_065518763.1\|1681496_1682387_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.6e-28	34.2
WP_065518764.1\|1682401_1682956_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	4.3e-51	57.1
WP_004175261.1\|1683135_1684302_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
WP_032409012.1\|1684721_1684844_-	small membrane protein	NA	NA	NA	NA
WP_000670922.1\|1685243_1686248_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	2.3e-31	29.5

DBSCAN-SWA_3

1889508 : 1942032

Microcystis_phage(27.27%)

transposase,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175481.1\|1889508_1890255_+\|protease	proteasome-type protease	NA	NA	NA	NA
WP_014343226.1\|1890734_1891592_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_014343225.1\|1891747_1892734_+	fatty acid desaturase	NA	NA	NA	NA
WP_014343224.1\|1892726_1893527_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_004145488.1\|1893564_1893687_-	nitrilotriacetate monooxygenase	NA	NA	NA	NA
WP_014343223.1\|1893984_1894128_-	hypothetical protein	NA	NA	NA	NA
WP_002910764.1\|1894304_1895246_+	transcriptional regulator TdcA	NA	NA	NA	NA
WP_002910762.1\|1895339_1896329_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_004200322.1\|1896354_1897686_+	threonine/serine transporter TdcC	NA	NA	NA	NA
WP_004175486.1\|1897713_1898922_+	propionate kinase	NA	NA	NA	NA
WP_021466440.1\|1898950_1901245_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	3.9e-159	41.8
WP_014343220.1\|1901295_1901442_-	hypothetical protein	NA	NA	NA	NA
WP_004189329.1\|1901731_1902790_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004175489.1\|1902899_1903814_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_004148804.1\|1903823_1905110_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
WP_004148803.1\|1905106_1905982_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	9.5e-05	41.5
WP_014343216.1\|1905978_1906698_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-11	26.0
WP_004145473.1\|1906703_1907597_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004148802.1\|1907880_1909524_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4
WP_002910717.1\|1909573_1910050_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002910715.1\|1910148_1911075_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152313.1\|1911378_1912674_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.3e-61	36.8
WP_004145468.1\|1912685_1913495_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_004152315.1\|1913469_1914369_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002910657.1\|1914478_1914961_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_014907357.1\|1915151_1915850_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
WP_002910652.1\|1915875_1916415_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_002910650.1\|1916529_1916859_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_004148795.1\|1917029_1917191_+	hypothetical protein	NA	NA	NA	NA
WP_014343212.1\|1917428_1918769_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_014343211.1\|1919422_1921120_+	OmpA family protein	NA	NA	NA	NA
WP_014343210.1\|1921578_1924065_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_032430450.1\|1924088_1925444_+	S-type Pyocin	NA	NA	NA	NA
WP_167812975.1\|1925444_1925954_+	hypothetical protein	NA	NA	NA	NA
WP_000019441.1\|1926251_1927232_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
WP_014343204.1\|1927646_1927958_+	hypothetical protein	NA	NA	NA	NA
WP_014343203.1\|1927979_1928873_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	8.8e-14	28.8
WP_014343202.1\|1928918_1929035_+	hypothetical protein	NA	NA	NA	NA
WP_014343201.1\|1929056_1929950_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.7e-12	27.3
WP_038435084.1\|1929975_1930104_+	hypothetical protein	NA	NA	NA	NA
WP_004184615.1\|1930125_1931019_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	2.2e-12	27.1
WP_004164123.1\|1931194_1931548_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_014343198.1\|1931511_1932084_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	3.9e-07	33.3
WP_014343197.1\|1932217_1932445_+	hypothetical protein	NA	NA	NA	NA
WP_014343196.1\|1932428_1932563_+	hypothetical protein	NA	NA	NA	NA
WP_014343194.1\|1932764_1933007_+	hypothetical protein	NA	NA	NA	NA
WP_004175522.1\|1933304_1933571_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_014343193.1\|1933574_1934732_+	hypothetical protein	NA	NA	NA	NA
WP_014343192.1\|1934715_1938126_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_014343191.1\|1938259_1940023_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_014343190.1\|1940052_1941069_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004189400.1\|1941043_1941586_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004152261.1\|1941588_1942032_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_4

2603538 : 2614424

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064114895.1\|2603538_2606646_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.5
WP_004176258.1\|2606700_2607966_+	MFS transporter	NA	NA	NA	NA
WP_040216274.1\|2607996_2609085_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.8e-210	99.7
WP_004176262.1\|2609171_2609432_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620095.1\|2609728_2610589_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_002210513.1\|2610609_2611371_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_002903955.1\|2611631_2612534_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_004190239.1\|2612545_2613811_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.9e-233	99.5
WP_002210516.1\|2613803_2614424_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_5

2661315 : 2749175

Salmonella_phage(21.82%)

transposase,holin,integrase,tail,terminase

attL 2662271:2662294|attR 2723361:2723384

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001118639.1\|2661315_2662239_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	1.6e-164	91.8
2662271:2662294	attL	NA	NA	NA	NA
WP_032419483.1\|2662690_2663869_+	hypothetical protein	NA	NA	NA	NA
WP_015958364.1\|2663871_2664267_+	hypothetical protein	NA	NA	NA	NA
WP_004190310.1\|2664427_2666083_-	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_032105167.1\|2666346_2667267_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_004176301.1\|2667430_2667787_-	hypothetical protein	NA	NA	NA	NA
WP_002903623.1\|2667942_2669559_+	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA
WP_004176303.1\|2669555_2670275_+	two-component system response regulator DcuR	NA	NA	NA	NA
WP_046654267.1\|2670255_2671206_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_029884317.1\|2671273_2674051_-	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	6.2e-66	31.1
WP_002903581.1\|2674766_2676203_+	anion permease	NA	NA	NA	NA
WP_040215835.1\|2676257_2677910_+	class I fumarate hydratase	NA	NA	NA	NA
WP_048337665.1\|2678072_2679689_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_004143067.1\|2681320_2681710_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
WP_004151556.1\|2681702_2682467_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
WP_048337664.1\|2682456_2683809_-	3-carboxy-cis,cis-muconate cycloisomerase	NA	NA	NA	NA
WP_004179693.1\|2683818_2685021_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_040215832.1\|2685031_2685688_-	CoA transferase subunit B	NA	NA	NA	NA
WP_002903522.1\|2685698_2686385_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
WP_032419018.1\|2686554_2687361_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004143055.1\|2687357_2687921_-	DNA endonuclease SmrA	NA	NA	NA	NA
WP_004148273.1\|2688022_2688931_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_040215831.1\|2689097_2690408_+	M20 family metallo-hydrolase	NA	NA	NA	NA
WP_032419021.1\|2690407_2691853_+	amidohydrolase	NA	NA	NA	NA
WP_017879817.1\|2691976_2693095_+	transporter	NA	NA	NA	NA
WP_004146386.1\|2693223_2694324_+\|integrase	site-specific integrase	A0A1W6JP34	Morganella_phage	2.9e-115	56.8
WP_075253235.1\|2694534_2694816_-	hypothetical protein	NA	NA	NA	NA
WP_072061016.1\|2695362_2695785_-	hypothetical protein	K7P834	Enterobacteria_phage	1.6e-26	48.1
WP_101979092.1\|2695862_2696411_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	7.6e-93	97.8
WP_101979510.1\|2697100_2700556_+	hypothetical protein	NA	NA	NA	NA
WP_101979018.1\|2700626_2701394_-	hypothetical protein	NA	NA	NA	NA
WP_101979000.1\|2703423_2706486_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	93.7
WP_004190616.1\|2706482_2706863_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.5e-55	77.0
WP_064081073.1\|2706872_2707355_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	5.3e-82	95.0
WP_004190622.1\|2707535_2708000_-	hypothetical protein	A0A286S298	Klebsiella_phage	3.0e-58	68.4
WP_101979509.1\|2707999_2711578_-\|tail	phage tail tape measure protein	K7PMB9	Enterobacterial_phage	6.5e-76	29.4
WP_057775156.1\|2711788_2712073_-	hypothetical protein	NA	NA	NA	NA
WP_004217333.1\|2712122_2712479_-	hypothetical protein	A0A1V0E5P9	Salmonella_phage	1.1e-44	75.0
WP_008807842.1\|2712555_2712762_-	hypothetical protein	NA	NA	NA	NA
WP_004146194.1\|2712899_2713382_-	hypothetical protein	NA	NA	NA	NA
WP_020948195.1\|2713437_2714610_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	3.2e-24	27.3
WP_044245111.1\|2714633_2715032_-	electron transfer flavoprotein subunit beta	A0A059VK45	Pseudomonas_phage	1.3e-12	33.6
WP_086624782.1\|2715028_2715580_-	hypothetical protein	G8C7Q1	Escherichia_phage	1.7e-28	41.5
WP_004217344.1\|2715581_2715965_-	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	7.1e-21	45.2
WP_004190646.1\|2715951_2716185_-	hypothetical protein	A0A2H4J0Y9	uncultured_Caudovirales_phage	5.8e-10	47.1
WP_004190649.1\|2716194_2716449_-	hypothetical protein	J9Q7U0	Salmonella_phage	8.0e-21	52.4
WP_008807837.1\|2716450_2716846_-	hypothetical protein	A0A0S2SYB7	Pseudomonas_phage	3.3e-13	43.3
WP_151391665.1\|2716886_2717159_-	hypothetical protein	NA	NA	NA	NA
WP_101978822.1\|2717167_2718121_-	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	3.2e-131	74.0
WP_016946679.1\|2718131_2718917_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.0e-66	63.9
WP_004227000.1\|2719030_2719207_-	hypothetical protein	NA	NA	NA	NA
WP_016946680.1\|2719447_2720560_-	hypothetical protein	I6PD76	Cronobacter_phage	2.3e-112	55.6
WP_016946681.1\|2720543_2721944_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	6.4e-128	53.7
WP_167812988.1\|2721945_2722380_-\|terminase	terminase	A0A0N7IRE3	Acinetobacter_phage	1.2e-37	64.3
WP_016151349.1\|2722359_2723328_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	5.0e-180	96.3
WP_167812990.1\|2723353_2724325_-\|terminase	terminase	A0A0S2SYF1	Pseudomonas_phage	1.6e-141	78.7
2723361:2723384	attR	NA	NA	NA	NA
WP_032434131.1\|2724308_2725304_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	1.1e-38	45.5
WP_023341467.1\|2726166_2726412_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	7.9e-34	95.1
WP_016946321.1\|2726815_2727010_-	hypothetical protein	A0A1L6Z528	Klebsiella_phage	2.0e-19	73.3
WP_016946320.1\|2727082_2727304_-	hypothetical protein	NA	NA	NA	NA
WP_023341465.1\|2727758_2728052_-	hypothetical protein	G8C7W3	Escherichia_phage	7.5e-31	71.1
WP_023341464.1\|2728193_2728469_-	hypothetical protein	G8C7W1	Escherichia_phage	7.8e-14	48.3
WP_016946315.1\|2728465_2728810_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	5.7e-38	79.8
WP_004184488.1\|2728806_2729346_-	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	2.3e-102	100.0
WP_024940884.1\|2729342_2729642_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-47	100.0
WP_032413621.1\|2730793_2731294_-	antiterminator	G8C7V7	Escherichia_phage	2.5e-87	92.1
WP_049266875.1\|2731290_2731431_-	YlcG family protein	NA	NA	NA	NA
WP_086624781.1\|2731427_2731652_-	protein ninY	Q76H69	Enterobacteria_phage	1.5e-23	63.5
WP_086624780.1\|2731648_2732230_-	protein NinG	E7C9S3	Salmonella_phage	2.7e-40	44.3
WP_016946309.1\|2732438_2733035_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.3e-90	80.1
WP_004184503.1\|2733413_2733647_-	DinI-like family protein	K7PM44	Enterobacteria_phage	2.9e-25	68.8
WP_032413665.1\|2734398_2734698_-	hypothetical protein	NA	NA	NA	NA
WP_032417030.1\|2734793_2735222_-	hypothetical protein	NA	NA	NA	NA
WP_020804600.1\|2735225_2735447_-	hypothetical protein	A9YWV3	Burkholderia_phage	1.3e-11	49.4
WP_020804604.1\|2735443_2735698_-	hypothetical protein	S5MQM0	Escherichia_phage	1.4e-09	50.6
WP_020804603.1\|2735690_2735894_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	3.8e-26	84.8
WP_032438549.1\|2735890_2736676_-	hypothetical protein	C7BGF1	Burkholderia_phage	7.3e-65	53.7
WP_032417027.1\|2736668_2737004_-	DUF977 family protein	H6WRX9	Salmonella_phage	1.3e-10	43.0
WP_032417026.1\|2737011_2737761_-	ATP-binding protein	H6WRX8	Salmonella_phage	1.3e-119	83.1
WP_023286278.1\|2737763_2738672_-	hypothetical protein	V5URT9	Shigella_phage	1.7e-89	54.1
WP_072032615.1\|2738686_2738875_-	hypothetical protein	NA	NA	NA	NA
WP_023287506.1\|2738962_2739499_-	bacteriophage regulatory protein CII	K7PJT7	Enterobacteria_phage	2.1e-63	70.4
WP_029503646.1\|2739501_2739735_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-20	61.6
WP_004190707.1\|2739839_2740235_+	helix-turn-helix transcriptional regulator	K7PM35	Enterobacteria_phage	3.1e-48	74.0
WP_136085610.1\|2740252_2740351_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_032438694.1\|2740682_2741546_+	hypothetical protein	M9NYX6	Enterobacteria_phage	1.3e-94	62.5
WP_020805737.1\|2741578_2741782_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	6.3e-21	76.1
WP_153932150.1\|2742146_2742377_-	hypothetical protein	NA	NA	NA	NA
WP_004179600.1\|2742670_2742862_+	YebW family protein	NA	NA	NA	NA
WP_016946289.1\|2742870_2743026_+	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	2.6e-14	74.5
WP_086624777.1\|2743163_2746262_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	3.7e-293	57.0
WP_029602854.1\|2746274_2747363_+	recombinase RecT	H6WRX0	Salmonella_phage	1.4e-106	56.0
WP_057774649.1\|2747397_2747742_+	hypothetical protein	NA	NA	NA	NA
WP_167812994.1\|2747734_2748781_+	DUF550 domain-containing protein	A0A220NQU1	Salmonella_phage	2.0e-33	63.9
WP_016946280.1\|2748914_2749175_+	pyocin activator PrtN family protein	A0A1L5C290	Pseudoalteromonas_phage	1.5e-11	43.7

DBSCAN-SWA_6

3356151 : 3365615

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004179158.1\|3356151_3357873_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3357917_3358619_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3358972_3359191_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3359311_3361591_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3361621_3361939_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3362264_3362486_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004150848.1\|3362562_3364503_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896440.1\|3364499_3365615_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_7

3804183 : 3874874

Klebsiella_phage(42.86%)

transposase,holin,head,portal,tail,protease,terminase,tRNA,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085955203.1\|3804183_3805547_-\|transposase	IS3-like element ISKpn1 family transposase	A0A1B1P773	Bacillus_phage	1.4e-74	51.5
WP_032445669.1\|3806402_3807434_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_032445667.1\|3807443_3808616_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_094833289.1\|3808612_3809533_-	myo-inosose-2 dehydratase	NA	NA	NA	NA
WP_004893732.1\|3810104_3810530_+	hypothetical protein	NA	NA	NA	NA
WP_002892491.1\|3810606_3812124_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	9.5e-85	36.3
WP_004151795.1\|3812455_3813931_-	dipeptide permease DtpD	A0A0P0IY73	Acinetobacter_phage	6.9e-48	29.0
WP_002892486.1\|3813990_3816138_-	lysine decarboxylase CadA	NA	NA	NA	NA
WP_002892484.1\|3816220_3817555_-	cadaverine/lysine antiporter	NA	NA	NA	NA
WP_032432743.1\|3817920_3819510_-	lysine decarboxylation/transport transcriptional activator CadC	NA	NA	NA	NA
WP_002892402.1\|3819803_3820076_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_002892400.1\|3820176_3821097_-	LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee	A0A1W6JP29	Morganella_phage	5.4e-51	40.1
WP_004211259.1\|3821607_3822474_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_048337559.1\|3822496_3823522_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_032439753.1\|3823523_3825959_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004893746.1\|3825969_3826665_-	molecular chaperone	NA	NA	NA	NA
WP_009485574.1\|3826723_3827284_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_167813014.1\|3827754_3828417_+	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_004191501.1\|3828394_3828700_+	hypothetical protein	NA	NA	NA	NA
WP_004147414.1\|3828752_3830057_-	citrate synthase	NA	NA	NA	NA
WP_004142684.1\|3830102_3830243_-	hypothetical protein	NA	NA	NA	NA
WP_002892370.1\|3830567_3830738_+	hypothetical protein	NA	NA	NA	NA
WP_032419287.1\|3830816_3831218_-	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_016946533.1\|3831599_3832139_+	hypothetical protein	NA	NA	NA	NA
WP_032419288.1\|3832607_3832892_-	hypothetical protein	NA	NA	NA	NA
WP_167813015.1\|3833566_3833884_-	hypothetical protein	K7PGV5	Enterobacterial_phage	8.1e-23	52.0
WP_167813017.1\|3833883_3834123_-	hypothetical protein	NA	NA	NA	NA
WP_167813019.1\|3834228_3835584_-	hypothetical protein	NA	NA	NA	NA
WP_167813020.1\|3835576_3836338_-	hypothetical protein	NA	NA	NA	NA
WP_102054523.1\|3836348_3837653_-	hypothetical protein	A0A286S1P0	Klebsiella_phage	9.8e-06	52.9
WP_102054587.1\|3837730_3840799_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	67.4
WP_102054588.1\|3840795_3841176_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	9.1e-37	54.8
WP_023284984.1\|3841183_3841666_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	2.9e-56	68.4
WP_001018848.1\|3841652_3842132_-	hypothetical protein	A0A286S298	Klebsiella_phage	1.9e-76	78.6
WP_167813022.1\|3842131_3844567_-\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	97.3
WP_052433481.1\|3844630_3845062_-	hypothetical protein	A0A286S1N7	Klebsiella_phage	9.6e-67	99.2
WP_001333686.1\|3845058_3845322_-	hypothetical protein	A0A286S1P2	Klebsiella_phage	6.9e-44	98.9
WP_001177591.1\|3845354_3845708_-\|tail	phage tail assembly protein	A0A286S1N4	Klebsiella_phage	4.9e-61	99.1
WP_000115125.1\|3845751_3846243_-	hypothetical protein	A0A286S1Q8	Klebsiella_phage	2.3e-88	100.0
WP_000561415.1\|3846299_3846665_-	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	3.9e-61	92.6
WP_000763233.1\|3846661_3847201_-	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	1.0e-94	100.0
WP_167813024.1\|3847193_3847526_-\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	6.9e-57	99.1
WP_004143899.1\|3847527_3847725_-	hypothetical protein	A0A286S2A5	Klebsiella_phage	1.7e-26	100.0
WP_017880223.1\|3847785_3848112_-\|head,tail	phage gp6-like head-tail connector protein	A0A286S294	Klebsiella_phage	7.5e-56	100.0
WP_044067369.1\|3848059_3848302_-	hypothetical protein	NA	NA	NA	NA
WP_042346268.1\|3848338_3849502_-\|capsid	phage major capsid protein	A0A286S1R4	Klebsiella_phage	1.5e-210	99.0
WP_004216821.1\|3849513_3850194_-\|head,protease	HK97 family phage prohead protease	A0A286S1N1	Klebsiella_phage	1.6e-124	100.0
WP_038434523.1\|3850199_3851477_-\|portal	phage portal protein	A0A286S1N5	Klebsiella_phage	5.3e-246	99.8
WP_102054543.1\|3851479_3853012_-\|terminase	terminase	A0A286S1M9	Klebsiella_phage	5.6e-295	99.6
WP_004143905.1\|3853021_3853456_-	hypothetical protein	A0A286S1P9	Klebsiella_phage	6.2e-74	100.0
WP_086551336.1\|3853577_3853787_-	serine acetyltransferase	A0A286N2R4	Klebsiella_phage	2.0e-22	82.6
WP_049109190.1\|3853799_3854090_-	HNH endonuclease	A0A286N2R3	Klebsiella_phage	2.9e-51	94.8
WP_086551337.1\|3854158_3854644_-	hypothetical protein	NA	NA	NA	NA
WP_048271635.1\|3854762_3855008_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	2.7e-18	63.0
WP_065520060.1\|3855396_3855585_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	2.2e-23	89.8
WP_167813026.1\|3855535_3855811_-	hypothetical protein	G8C7W1	Escherichia_phage	5.6e-20	59.6
WP_167813028.1\|3855818_3856448_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	1.2e-105	90.9
WP_008806056.1\|3856447_3856729_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.3e-32	73.1
WP_025983157.1\|3856715_3857111_-	membrane protein	G8C7V8	Escherichia_phage	1.5e-45	73.1
WP_117088616.1\|3857809_3858499_-	antiterminator	I6PDF8	Cronobacter_phage	7.6e-58	53.2
WP_074399076.1\|3858495_3858636_-	YlcG family protein	NA	NA	NA	NA
WP_104447027.1\|3858632_3859271_-	hypothetical protein	H6WRY9	Salmonella_phage	9.2e-74	68.9
WP_032413853.1\|3859263_3859434_-	NinE family protein	G8C7V4	Escherichia_phage	2.8e-14	71.4
WP_167813030.1\|3859439_3860036_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	4.7e-56	53.8
WP_043906731.1\|3860131_3860389_-	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	6.4e-26	76.6
WP_032428632.1\|3860388_3860676_-	hypothetical protein	NA	NA	NA	NA
WP_167813032.1\|3861305_3861569_-	DUF4752 family protein	T1S9K2	Salmonella_phage	6.3e-29	74.4
WP_080850849.1\|3861565_3862039_-	hypothetical protein	R9TME7	Aeromonas_phage	4.2e-07	32.7
WP_064172641.1\|3862035_3862329_-	hypothetical protein	O48423	Enterobacteria_phage	1.1e-26	66.7
WP_080850846.1\|3862325_3863195_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	4.4e-95	69.7
WP_080850843.1\|3863179_3864034_-	replication protein	K7PGT1	Enterobacteria_phage	1.8e-61	54.0
WP_001548453.1\|3864119_3864341_-	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_004201115.1\|3864380_3864608_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.4e-24	77.1
WP_167813034.1\|3864719_3865418_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	6.2e-108	83.6
WP_094339392.1\|3865644_3866574_+	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	2.6e-93	53.4
WP_060613586.1\|3866611_3866815_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	2.7e-19	71.6
WP_161477215.1\|3867100_3867259_+	hypothetical protein	NA	NA	NA	NA
WP_008807814.1\|3867251_3867458_+	phage encoded cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
WP_072060568.1\|3867521_3868052_+	HNH endonuclease	A0A173GC65	Salmonella_phage	1.0e-33	46.0
WP_004135670.1\|3868142_3868340_+	hypothetical protein	NA	NA	NA	NA
WP_167813036.1\|3868336_3868495_+	hypothetical protein	A0A1R3Y5R4	Salmonella_virus	7.6e-06	57.8
WP_065888852.1\|3868491_3869145_+	single-stranded DNA-binding protein	A0A1W6JP21	Morganella_phage	4.0e-64	62.7
WP_065888851.1\|3869128_3869419_+	hypothetical protein	NA	NA	NA	NA
WP_024622733.1\|3869415_3869721_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_167813037.1\|3869717_3870245_+	phage N-6-adenine-methyltransferase	G8EYI1	Enterobacteria_phage	3.2e-56	61.6
WP_102054211.1\|3870303_3870543_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	7.8e-10	43.6
WP_071549006.1\|3870555_3870891_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004143017.1\|3872362_3873229_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
WP_004143016.1\|3873230_3873443_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004143010.1\|3873488_3874874_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

DBSCAN-SWA_8

4500195 : 4574280

Leptospira_phage(25.0%)

transposase,tRNA,integrase

attL 4554362:4554376|attR 4574507:4574521

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040215935.1\|4500195_4501203_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_040215933.1\|4501509_4502577_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_046654710.1\|4502573_4505318_+	ribosome-associated ATPase/putative transporter RbbA	A0A2H4PQG7	Staphylococcus_phage	2.7e-21	30.7
WP_040215928.1\|4505317_4506442_+	ABC-2 transporter permease	NA	NA	NA	NA
WP_002887322.1\|4506482_4506800_-	hypothetical protein	NA	NA	NA	NA
WP_004214138.1\|4512959_4514081_+	cupin domain-containing protein	NA	NA	NA	NA
WP_048337996.1\|4514128_4514662_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002887278.1\|4514672_4514939_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_048291165.1\|4515041_4516475_-	Cu(+)/Ag(+) sensor histidine kinase	A0A1V0SGX0	Hokovirus	2.7e-12	27.6
WP_002887273.1\|4516464_4517148_-	copper response regulator transcription factor CusR	W8CYM9	Bacillus_phage	7.9e-31	36.0
WP_047694163.1\|4517319_4518705_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_094833307.1\|4518722_4519067_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_065782628.1\|4519111_4520374_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_094833306.1\|4520385_4523535_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	5.8e-60	22.8
WP_004177568.1\|4523607_4523955_+	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_002887259.1\|4523964_4524498_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	8.2e-52	59.6
WP_002887258.1\|4524614_4525343_+	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	1.4e-46	47.4
WP_002887256.1\|4525574_4526009_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_004152218.1\|4526005_4526725_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_094833305.1\|4526721_4527981_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_004177578.1\|4527982_4528705_+	DUF1365 domain-containing protein	NA	NA	NA	NA
WP_040216918.1\|4528701_4529922_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_048991493.1\|4529918_4530404_+	DUF2878 domain-containing protein	NA	NA	NA	NA
WP_004214859.1\|4530400_4530925_+	hypothetical protein	NA	NA	NA	NA
WP_094833304.1\|4530921_4531473_+	DUF3833 domain-containing protein	NA	NA	NA	NA
WP_023343042.1\|4531469_4532429_+	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_095153255.1\|4532719_4534102_-	carbohydrate porin	NA	NA	NA	NA
WP_032409642.1\|4534232_4534346_-	hypothetical protein	NA	NA	NA	NA
WP_021464733.1\|4534373_4535693_-	xylose isomerase	NA	NA	NA	NA
WP_167813082.1\|4536119_4537559_+	MFS transporter	NA	NA	NA	NA
WP_048337989.1\|4537617_4539297_+	glycoside hydrolase family 43 protein	NA	NA	NA	NA
WP_002887060.1\|4539379_4540018_-	HNH endonuclease	NA	NA	NA	NA
WP_000183578.1\|4541068_4541878_-	hypothetical protein	NA	NA	NA	NA
WP_004178423.1\|4541975_4544198_+	glycosyltransferase	NA	NA	NA	NA
WP_032418123.1\|4546092_4547220_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_040217119.1\|4547209_4547473_+	hypothetical protein	NA	NA	NA	NA
WP_071579742.1\|4547634_4548891_+	conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_032418126.1\|4548853_4549120_+	hypothetical protein	NA	NA	NA	NA
WP_167813049.1\|4550061_4551507_+	hypothetical protein	NA	NA	NA	NA
WP_143722351.1\|4551575_4552695_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.1e-51	42.4
WP_094833144.1\|4553059_4554171_-\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	3.4e-07	30.4
4554362:4554376	attL	NA	NA	NA	NA
WP_048337987.1\|4554481_4555570_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_048337986.1\|4555569_4556190_-	hypothetical protein	NA	NA	NA	NA
WP_048337985.1\|4556887_4557148_+	hypothetical protein	NA	NA	NA	NA
WP_048337984.1\|4557257_4557560_+	hypothetical protein	NA	NA	NA	NA
WP_167813051.1\|4558321_4559290_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	7.4e-184	98.1
WP_167813053.1\|4561559_4563362_-	DUF1156 domain-containing protein	NA	NA	NA	NA
WP_143722351.1\|4563421_4564542_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.1e-51	42.4
WP_167813055.1\|4564575_4565694_-	DUF1156 domain-containing protein	NA	NA	NA	NA
WP_064114729.1\|4565836_4569379_-	DUF3883 domain-containing protein	A0A1B1IUI1	uncultured_Mediterranean_phage	1.2e-53	27.3
WP_048337980.1\|4569632_4569917_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_048337979.1\|4570967_4571429_-	hypothetical protein	NA	NA	NA	NA
WP_048337978.1\|4571403_4572300_-	hypothetical protein	NA	NA	NA	NA
WP_048337977.1\|4573008_4574280_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	4.1e-73	35.7
4574507:4574521	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050827

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP050826

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection